locus-tag class description FEE38_00010 PF00437 Type II/IV secretion system protein FEE38_00015 PF03743 Bacterial conjugation TrbI-like protein FEE38_00025 PF04335 VirB8 protein FEE38_00050 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FEE38_00070 PF01464 Transglycosylase SLT domain FEE38_00110 PF18284 DNA methylase N-terminal domain FEE38_00110 PF00145 C-5 cytosine-specific DNA methylase FEE38_00115 PF09019 EcoRII C terminal FEE38_00115 PF09217 Restriction endonuclease EcoRII, N-terminal FEE38_00130 PF13610 DDE domain FEE38_00145 PF00186 Dihydrofolate reductase FEE38_00150 PF13495 Phage integrase, N-terminal SAM-like domain FEE38_00150 PF00589 Phage integrase family FEE38_00160 PF02796 Helix-turn-helix domain of resolvase FEE38_00160 PF00239 Resolvase, N terminal domain FEE38_00170 PF01051 Initiator Replication protein FEE38_00185 PF13438 Domain of unknown function (DUF4113) FEE38_00185 PF00817 impB/mucB/samB family FEE38_00185 PF11799 impB/mucB/samB family C-terminal domain FEE38_00190 PF00717 Peptidase S24-like FEE38_00280 PF18272 single-stranded DNA binding TraI N-terminal subdomain FEE38_00280 PF07057 DNA helicase TraI FEE38_00280 PF18340 DNA relaxase TraI 2B/2B-like domain FEE38_00280 PF08751 TrwC relaxase FEE38_00295 PF13610 DDE domain FEE38_00310 PF00107 Zinc-binding dehydrogenase FEE38_00310 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_00315 PF07690 Major Facilitator Superfamily FEE38_00320 PF02909 Tetracyclin repressor-like, C-terminal domain FEE38_00320 PF00440 Bacterial regulatory proteins, tetR family FEE38_00330 PF01526 Tn3 transposase DDE domain FEE38_00330 PF13700 Domain of unknown function (DUF4158) FEE38_00335 PF00239 Resolvase, N terminal domain FEE38_00335 PF02796 Helix-turn-helix domain of resolvase FEE38_00350 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FEE38_00355 PF01636 Phosphotransferase enzyme family FEE38_00360 PF00809 Pterin binding enzyme FEE38_00375 PF02371 Transposase IS116/IS110/IS902 family FEE38_00375 PF01548 Transposase FEE38_00390 PF13610 DDE domain FEE38_00415 PF02402 Lysis protein FEE38_00435 PF01815 Rop protein FEE38_00455 PF12848 ABC transporter FEE38_00455 PF00005 ABC transporter FEE38_00470 PF03949 Malic enzyme, NAD binding domain FEE38_00470 PF00390 Malic enzyme, N-terminal domain FEE38_00475 PF08136 30S ribosomal protein subunit S22 family FEE38_00485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_00485 PF03466 LysR substrate binding domain FEE38_00490 PF10820 Protein of unknown function (DUF2543) FEE38_00500 PF10685 Stress-induced bacterial acidophilic repeat motif FEE38_00515 PF05974 Domain of unknown function (DUF892) FEE38_00525 PF16657 Maltogenic Amylase, C-terminal domain FEE38_00525 PF00128 Alpha amylase, catalytic domain FEE38_00530 PF00106 short chain dehydrogenase FEE38_00535 PF04239 Protein of unknown function (DUF421) FEE38_00545 PF04076 Bacterial OB fold (BOF) protein FEE38_00550 PF02566 OsmC-like protein FEE38_00570 PF16916 Dimerisation domain of Zinc Transporter FEE38_00570 PF01545 Cation efflux family FEE38_00575 PF01062 Bestrophin, RFP-TM, chloride channel FEE38_00580 PF00384 Molybdopterin oxidoreductase FEE38_00585 PF03466 LysR substrate binding domain FEE38_00585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_00590 PF00083 Sugar (and other) transporter FEE38_00600 PF02308 MgtC family FEE38_00605 PF03969 AFG1-like ATPase FEE38_00610 PF00141 Peroxidase FEE38_00615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_00615 PF03466 LysR substrate binding domain FEE38_00630 PF03717 Penicillin-binding Protein dimerisation domain FEE38_00630 PF00905 Penicillin binding protein transpeptidase domain FEE38_00635 PF00958 GMP synthase C terminal domain FEE38_00635 PF00117 Glutamine amidotransferase class-I FEE38_00635 PF02540 NAD synthase FEE38_00645 PF04055 Radical SAM superfamily FEE38_00645 PF13186 Iron-sulfur cluster-binding domain FEE38_00650 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FEE38_00655 PF03070 TENA/THI-4/PQQC family FEE38_00660 PF12706 Beta-lactamase superfamily domain FEE38_00665 PF08042 PqqA family FEE38_00670 PF01244 Membrane dipeptidase (Peptidase family M19) FEE38_00675 PF00561 alpha/beta hydrolase fold FEE38_00680 PF00486 Transcriptional regulatory protein, C terminal FEE38_00680 PF00072 Response regulator receiver domain FEE38_00685 PF00512 His Kinase A (phospho-acceptor) domain FEE38_00685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_00685 PF00672 HAMP domain FEE38_00690 PF00578 AhpC/TSA family FEE38_00690 PF02683 Cytochrome C biogenesis protein transmembrane region FEE38_00690 PF17991 Thioredoxin like C-terminal domain FEE38_00705 PF00282 Pyridoxal-dependent decarboxylase conserved domain FEE38_00710 PF00202 Aminotransferase class-III FEE38_00715 PF09084 NMT1/THI5 like FEE38_00720 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_00725 PF00005 ABC transporter FEE38_00730 PF03070 TENA/THI-4/PQQC family FEE38_00740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_00740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_00750 PF00356 Bacterial regulatory proteins, lacI family FEE38_00755 PF08448 PAS fold FEE38_00755 PF00990 Diguanylate cyclase, GGDEF domain FEE38_00760 PF01979 Amidohydrolase family FEE38_00765 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FEE38_00775 PF01177 Asp/Glu/Hydantoin racemase FEE38_00800 PF00300 Histidine phosphatase superfamily (branch 1) FEE38_00810 PF00857 Isochorismatase family FEE38_00820 PF00106 short chain dehydrogenase FEE38_00825 PF00117 Glutamine amidotransferase class-I FEE38_00830 PF12833 Helix-turn-helix domain FEE38_00830 PF02311 AraC-like ligand binding domain FEE38_00850 PF00109 Beta-ketoacyl synthase, N-terminal domain FEE38_00850 PF02801 Beta-ketoacyl synthase, C-terminal domain FEE38_00855 PF07690 Major Facilitator Superfamily FEE38_00860 PF13533 Biotin-lipoyl like FEE38_00870 PF02774 Semialdehyde dehydrogenase, dimerisation domain FEE38_00870 PF01118 Semialdehyde dehydrogenase, NAD binding domain FEE38_00885 PF01425 Amidase FEE38_00910 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_00920 PF00005 ABC transporter FEE38_00925 PF00266 Aminotransferase class-V FEE38_00930 PF07687 Peptidase dimerisation domain FEE38_00930 PF01546 Peptidase family M20/M25/M40 FEE38_00935 PF03060 Nitronate monooxygenase FEE38_00940 PF03466 LysR substrate binding domain FEE38_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_00950 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FEE38_00955 PF13454 FAD-NAD(P)-binding FEE38_00960 PF07690 Major Facilitator Superfamily FEE38_00960 PF00083 Sugar (and other) transporter FEE38_00975 PF00440 Bacterial regulatory proteins, tetR family FEE38_01005 PF07690 Major Facilitator Superfamily FEE38_01015 PF00356 Bacterial regulatory proteins, lacI family FEE38_01020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_01030 PF03611 PTS system sugar-specific permease component FEE38_01035 PF00834 Ribulose-phosphate 3 epimerase family FEE38_01045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_01050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_01050 PF02378 Phosphotransferase system, EIIC FEE38_01055 PF01810 LysE type translocator FEE38_01070 PF03466 LysR substrate binding domain FEE38_01070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01075 PF03466 LysR substrate binding domain FEE38_01080 PF00753 Metallo-beta-lactamase superfamily FEE38_01090 PF07687 Peptidase dimerisation domain FEE38_01090 PF01546 Peptidase family M20/M25/M40 FEE38_01100 PF02126 Phosphotriesterase family FEE38_01105 PF02653 Branched-chain amino acid transport system / permease component FEE38_01110 PF00005 ABC transporter FEE38_01115 PF00356 Bacterial regulatory proteins, lacI family FEE38_01125 PF00294 pfkB family carbohydrate kinase FEE38_01145 PF04972 BON domain FEE38_01145 PF01476 LysM domain FEE38_01150 PF07690 Major Facilitator Superfamily FEE38_01160 PF00672 HAMP domain FEE38_01160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_01160 PF00512 His Kinase A (phospho-acceptor) domain FEE38_01165 PF00072 Response regulator receiver domain FEE38_01165 PF14532 Sigma-54 interaction domain FEE38_01165 PF02954 Bacterial regulatory protein, Fis family FEE38_01170 PF13673 Acetyltransferase (GNAT) domain FEE38_01170 PF04229 GrpB protein FEE38_01175 PF03466 LysR substrate binding domain FEE38_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01200 PF02796 Helix-turn-helix domain of resolvase FEE38_01200 PF00239 Resolvase, N terminal domain FEE38_01215 PF00665 Integrase core domain FEE38_01215 PF13333 Integrase core domain FEE38_01215 PF13276 HTH-like domain FEE38_01255 PF01527 Transposase FEE38_01255 PF00665 Integrase core domain FEE38_01255 PF13333 Integrase core domain FEE38_01255 PF13276 HTH-like domain FEE38_01260 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FEE38_01260 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FEE38_01265 PF01965 DJ-1/PfpI family FEE38_01265 PF12833 Helix-turn-helix domain FEE38_01275 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FEE38_01290 PF00455 DeoR C terminal sensor domain FEE38_01290 PF08220 DeoR-like helix-turn-helix domain FEE38_01295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_01295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_01300 PF01791 DeoC/LacD family aldolase FEE38_01305 PF00455 DeoR C terminal sensor domain FEE38_01305 PF08220 DeoR-like helix-turn-helix domain FEE38_01310 PF00834 Ribulose-phosphate 3 epimerase family FEE38_01315 PF00294 pfkB family carbohydrate kinase FEE38_01320 PF07690 Major Facilitator Superfamily FEE38_01330 PF13193 AMP-binding enzyme C-terminal domain FEE38_01330 PF00501 AMP-binding enzyme FEE38_01335 PF01144 Coenzyme A transferase FEE38_01345 PF00108 Thiolase, N-terminal domain FEE38_01345 PF02803 Thiolase, C-terminal domain FEE38_01350 PF07690 Major Facilitator Superfamily FEE38_01355 PF08450 SMP-30/Gluconolactonase/LRE-like region FEE38_01365 PF02595 Glycerate kinase family FEE38_01370 PF17853 GGDEF-like domain FEE38_01370 PF05651 Putative sugar diacid recognition FEE38_01370 PF13556 PucR C-terminal helix-turn-helix domain FEE38_01375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FEE38_01375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FEE38_01380 PF03466 LysR substrate binding domain FEE38_01380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01390 PF00392 Bacterial regulatory proteins, gntR family FEE38_01390 PF07729 FCD domain FEE38_01395 PF00367 phosphotransferase system, EIIB FEE38_01395 PF02378 Phosphotransferase system, EIIC FEE38_01400 PF13737 Transposase DDE domain FEE38_01405 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_01405 PF02056 Family 4 glycosyl hydrolase FEE38_01415 PF00381 PTS HPr component phosphorylation site FEE38_01415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_01425 PF00756 Putative esterase FEE38_01430 PF00563 EAL domain FEE38_01430 PF03707 Bacterial signalling protein N terminal repeat FEE38_01430 PF13188 PAS domain FEE38_01430 PF00990 Diguanylate cyclase, GGDEF domain FEE38_01445 PF00557 Metallopeptidase family M24 FEE38_01460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_01460 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_01465 PF13953 PapC C-terminal domain FEE38_01465 PF13954 PapC N-terminal domain FEE38_01465 PF00577 Outer membrane usher protein FEE38_01485 PF13657 HipA N-terminal domain FEE38_01485 PF07804 HipA-like C-terminal domain FEE38_01490 PF01381 Helix-turn-helix FEE38_01495 PF00576 HIUase/Transthyretin family FEE38_01500 PF01014 Uricase FEE38_01500 PF09349 OHCU decarboxylase FEE38_01505 PF00860 Permease family FEE38_01510 PF01494 FAD binding domain FEE38_01515 PF03466 LysR substrate binding domain FEE38_01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01520 PF00355 Rieske [2Fe-2S] domain FEE38_01525 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_01530 PF07690 Major Facilitator Superfamily FEE38_01535 PF12833 Helix-turn-helix domain FEE38_01550 PF09905 DNA-binding protein VF530 FEE38_01560 PF03180 NLPA lipoprotein FEE38_01565 PF09383 NIL domain FEE38_01565 PF00005 ABC transporter FEE38_01570 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_01575 PF03060 Nitronate monooxygenase FEE38_01580 PF03466 LysR substrate binding domain FEE38_01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01585 PF06779 Uncharacterised MFS-type transporter YbfB FEE38_01600 PF07690 Major Facilitator Superfamily FEE38_01610 PF13649 Methyltransferase domain FEE38_01650 PF00583 Acetyltransferase (GNAT) family FEE38_01655 PF01232 Mannitol dehydrogenase Rossmann domain FEE38_01655 PF08125 Mannitol dehydrogenase C-terminal domain FEE38_01665 PF00990 Diguanylate cyclase, GGDEF domain FEE38_01670 PF13811 Domain of unknown function (DUF4186) FEE38_01675 PF04960 Glutaminase FEE38_01680 PF00171 Aldehyde dehydrogenase family FEE38_01685 PF03466 LysR substrate binding domain FEE38_01685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_01690 PF00583 Acetyltransferase (GNAT) family FEE38_01695 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FEE38_01695 PF00056 lactate/malate dehydrogenase, NAD binding domain FEE38_01700 PF00455 DeoR C terminal sensor domain FEE38_01700 PF08220 DeoR-like helix-turn-helix domain FEE38_01705 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FEE38_01710 PF17042 Nucleotide-binding C-terminal domain FEE38_01710 PF07005 Sugar-binding N-terminal domain FEE38_01715 PF00465 Iron-containing alcohol dehydrogenase FEE38_01720 PF00701 Dihydrodipicolinate synthetase family FEE38_01725 PF01842 ACT domain FEE38_01725 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_01725 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_01730 PF07690 Major Facilitator Superfamily FEE38_01735 PF02567 Phenazine biosynthesis-like protein FEE38_01740 PF07690 Major Facilitator Superfamily FEE38_01745 PF01914 MarC family integral membrane protein FEE38_01750 PF01047 MarR family FEE38_01755 PF12833 Helix-turn-helix domain FEE38_01760 PF13999 MarB protein FEE38_01765 PF00892 EamA-like transporter family FEE38_01770 PF07690 Major Facilitator Superfamily FEE38_01780 PF00005 ABC transporter FEE38_01785 PF00005 ABC transporter FEE38_01790 PF02653 Branched-chain amino acid transport system / permease component FEE38_01795 PF02653 Branched-chain amino acid transport system / permease component FEE38_01800 PF13458 Periplasmic binding protein FEE38_01805 PF01717 Cobalamin-independent synthase, Catalytic domain FEE38_01815 PF12833 Helix-turn-helix domain FEE38_01815 PF01965 DJ-1/PfpI family FEE38_01830 PF00356 Bacterial regulatory proteins, lacI family FEE38_01835 PF02837 Glycosyl hydrolases family 2, sugar binding domain FEE38_01835 PF00703 Glycosyl hydrolases family 2 FEE38_01835 PF02929 Beta galactosidase small chain FEE38_01835 PF16353 Domain of unknown function(DUF4981) FEE38_01835 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FEE38_01840 PF01306 LacY proton/sugar symporter FEE38_01845 PF02463 RecF/RecN/SMC N terminal domain FEE38_01860 PF00455 DeoR C terminal sensor domain FEE38_01860 PF08220 DeoR-like helix-turn-helix domain FEE38_01870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FEE38_01870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FEE38_01875 PF07005 Sugar-binding N-terminal domain FEE38_01875 PF17042 Nucleotide-binding C-terminal domain FEE38_01880 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_01885 PF01261 Xylose isomerase-like TIM barrel FEE38_01890 PF02447 GntP family permease FEE38_01915 PF00563 EAL domain FEE38_01915 PF04940 Sensors of blue-light using FAD FEE38_01920 PF02464 Competence-damaged protein FEE38_01925 PF00011 Hsp20/alpha crystallin family FEE38_01950 PF02586 SOS response associated peptidase (SRAP) FEE38_01955 PF02311 AraC-like ligand binding domain FEE38_01955 PF12833 Helix-turn-helix domain FEE38_01965 PF01432 Peptidase family M3 FEE38_01970 PF00106 short chain dehydrogenase FEE38_01975 PF00392 Bacterial regulatory proteins, gntR family FEE38_01975 PF07729 FCD domain FEE38_01980 PF00582 Universal stress protein family FEE38_01985 PF01232 Mannitol dehydrogenase Rossmann domain FEE38_01985 PF08125 Mannitol dehydrogenase C-terminal domain FEE38_01990 PF07690 Major Facilitator Superfamily FEE38_01995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FEE38_02000 PF06932 Protein of unknown function (DUF1283) FEE38_02005 PF13302 Acetyltransferase (GNAT) domain FEE38_02010 PF06788 Uncharacterised protein family (UPF0257) FEE38_02015 PF06649 Protein of unknown function (DUF1161) FEE38_02025 PF13247 4Fe-4S dicluster domain FEE38_02025 PF12800 4Fe-4S binding domain FEE38_02030 PF04976 DMSO reductase anchor subunit (DmsC) FEE38_02035 PF02613 Nitrate reductase delta subunit FEE38_02040 PF00654 Voltage gated chloride channel FEE38_02050 PF00480 ROK family FEE38_02055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02055 PF03466 LysR substrate binding domain FEE38_02060 PF07690 Major Facilitator Superfamily FEE38_02065 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FEE38_02075 PF00089 Trypsin FEE38_02085 PF00893 Small Multidrug Resistance protein FEE38_02090 PF00893 Small Multidrug Resistance protein FEE38_02095 PF01594 AI-2E family transporter FEE38_02100 PF16957 Malonate decarboxylase, alpha subunit, transporter FEE38_02105 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FEE38_02110 PF06857 Malonate decarboxylase delta subunit (MdcD) FEE38_02115 PF01039 Carboxyl transferase domain FEE38_02125 PF03547 Membrane transport protein FEE38_02130 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FEE38_02135 PF00698 Acyl transferase domain FEE38_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02140 PF03466 LysR substrate binding domain FEE38_02145 PF06039 Malate:quinone oxidoreductase (Mqo) FEE38_02150 PF13580 SIS domain FEE38_02160 PF00989 PAS fold FEE38_02160 PF17203 Single cache domain 3 FEE38_02160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FEE38_02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_02165 PF00072 Response regulator receiver domain FEE38_02170 PF02424 ApbE family FEE38_02175 PF00890 FAD binding domain FEE38_02175 PF14537 Cytochrome c3 FEE38_02180 PF00939 Sodium:sulfate symporter transmembrane region FEE38_02185 PF05681 Fumarate hydratase (Fumerase) FEE38_02185 PF05683 Fumarase C-terminus FEE38_02195 PF02627 Carboxymuconolactone decarboxylase family FEE38_02200 PF12146 Serine aminopeptidase, S33 FEE38_02205 PF10397 Adenylosuccinate lyase C-terminus FEE38_02205 PF00206 Lyase FEE38_02210 PF02803 Thiolase, C-terminal domain FEE38_02210 PF00108 Thiolase, N-terminal domain FEE38_02215 PF01144 Coenzyme A transferase FEE38_02220 PF01144 Coenzyme A transferase FEE38_02225 PF09339 IclR helix-turn-helix domain FEE38_02225 PF01614 Bacterial transcriptional regulator FEE38_02230 PF01713 Smr domain FEE38_02235 PF03466 LysR substrate binding domain FEE38_02235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02240 PF01546 Peptidase family M20/M25/M40 FEE38_02240 PF07687 Peptidase dimerisation domain FEE38_02245 PF01546 Peptidase family M20/M25/M40 FEE38_02250 PF03806 AbgT putative transporter family FEE38_02260 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FEE38_02260 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FEE38_02265 PF00325 Bacterial regulatory proteins, crp family FEE38_02265 PF00027 Cyclic nucleotide-binding domain FEE38_02270 PF00582 Universal stress protein family FEE38_02275 PF15930 Domain of unknown function FEE38_02280 PF02233 NAD(P) transhydrogenase beta subunit FEE38_02285 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FEE38_02285 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FEE38_02285 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FEE38_02295 PF07338 Protein of unknown function (DUF1471) FEE38_02305 PF13520 Amino acid permease FEE38_02315 PF06942 GlpM protein FEE38_02320 PF00486 Transcriptional regulatory protein, C terminal FEE38_02320 PF00072 Response regulator receiver domain FEE38_02330 PF00512 His Kinase A (phospho-acceptor) domain FEE38_02330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_02330 PF00672 HAMP domain FEE38_02335 PF05472 DNA replication terminus site-binding protein (Ter protein) FEE38_02340 PF10415 Fumarase C C-terminus FEE38_02340 PF00206 Lyase FEE38_02345 PF05681 Fumarate hydratase (Fumerase) FEE38_02345 PF05683 Fumarase C-terminus FEE38_02350 PF01238 Phosphomannose isomerase type I FEE38_02355 PF06097 Bacterial protein of unknown function (DUF945) FEE38_02360 PF00356 Bacterial regulatory proteins, lacI family FEE38_02360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_02365 PF02378 Phosphotransferase system, EIIC FEE38_02365 PF00367 phosphotransferase system, EIIB FEE38_02370 PF13408 Recombinase zinc beta ribbon domain FEE38_02370 PF00239 Resolvase, N terminal domain FEE38_02370 PF07508 Recombinase FEE38_02405 PF13737 Transposase DDE domain FEE38_02415 PF16916 Dimerisation domain of Zinc Transporter FEE38_02415 PF01545 Cation efflux family FEE38_02425 PF13737 Transposase DDE domain FEE38_02430 PF02796 Helix-turn-helix domain of resolvase FEE38_02430 PF00239 Resolvase, N terminal domain FEE38_02445 PF02378 Phosphotransferase system, EIIC FEE38_02445 PF00367 phosphotransferase system, EIIB FEE38_02450 PF00155 Aminotransferase class I and II FEE38_02460 PF14001 YdfZ protein FEE38_02475 PF04143 Sulphur transport FEE38_02480 PF01206 Sulfurtransferase TusA FEE38_02485 PF07166 Protein of unknown function (DUF1398) FEE38_02490 PF01679 Proteolipid membrane potential modulator FEE38_02495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FEE38_02495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FEE38_02500 PF00171 Aldehyde dehydrogenase family FEE38_02505 PF02698 DUF218 domain FEE38_02510 PF00083 Sugar (and other) transporter FEE38_02515 PF00324 Amino acid permease FEE38_02520 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FEE38_02525 PF04996 Succinylarginine dihydrolase FEE38_02530 PF00171 Aldehyde dehydrogenase family FEE38_02535 PF04958 Arginine N-succinyltransferase beta subunit FEE38_02540 PF00202 Aminotransferase class-III FEE38_02545 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FEE38_02545 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FEE38_02550 PF00248 Aldo/keto reductase family FEE38_02555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02555 PF03466 LysR substrate binding domain FEE38_02570 PF13533 Biotin-lipoyl like FEE38_02575 PF02321 Outer membrane efflux protein FEE38_02580 PF01596 O-methyltransferase FEE38_02585 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FEE38_02585 PF00270 DEAD/DEAH box helicase FEE38_02585 PF11898 Domain of unknown function (DUF3418) FEE38_02585 PF04408 Helicase associated domain (HA2) FEE38_02585 PF00271 Helicase conserved C-terminal domain FEE38_02590 PF02525 Flavodoxin-like fold FEE38_02600 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_02605 PF08223 PaaX-like protein C-terminal domain FEE38_02605 PF07848 PaaX-like protein FEE38_02610 PF14535 AMP-binding enzyme C-terminal domain FEE38_02610 PF00501 AMP-binding enzyme FEE38_02615 PF00108 Thiolase, N-terminal domain FEE38_02615 PF02803 Thiolase, C-terminal domain FEE38_02620 PF03061 Thioesterase superfamily FEE38_02625 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FEE38_02625 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FEE38_02625 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain FEE38_02630 PF00378 Enoyl-CoA hydratase/isomerase FEE38_02635 PF00378 Enoyl-CoA hydratase/isomerase FEE38_02640 PF00175 Oxidoreductase NAD-binding domain FEE38_02640 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_02640 PF00970 Oxidoreductase FAD-binding domain FEE38_02645 PF01883 Iron-sulfur cluster assembly protein FEE38_02650 PF05138 Phenylacetic acid catabolic protein FEE38_02655 PF06243 Phenylacetic acid degradation B FEE38_02660 PF05138 Phenylacetic acid catabolic protein FEE38_02665 PF00171 Aldehyde dehydrogenase family FEE38_02665 PF01575 MaoC like domain FEE38_02670 PF01179 Copper amine oxidase, enzyme domain FEE38_02670 PF07833 Copper amine oxidase N-terminal domain FEE38_02670 PF02728 Copper amine oxidase, N3 domain FEE38_02670 PF02727 Copper amine oxidase, N2 domain FEE38_02685 PF07687 Peptidase dimerisation domain FEE38_02685 PF01546 Peptidase family M20/M25/M40 FEE38_02695 PF01042 Endoribonuclease L-PSP FEE38_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02705 PF03466 LysR substrate binding domain FEE38_02715 PF00005 ABC transporter FEE38_02720 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FEE38_02725 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_02735 PF02558 Ketopantoate reductase PanE/ApbA FEE38_02735 PF08546 Ketopantoate reductase PanE/ApbA C terminal FEE38_02740 PF00171 Aldehyde dehydrogenase family FEE38_02745 PF12833 Helix-turn-helix domain FEE38_02745 PF14525 AraC-binding-like domain FEE38_02750 PF07027 Protein of unknown function (DUF1318) FEE38_02755 PF13617 YnbE-like lipoprotein FEE38_02760 PF11739 Dicarboxylate transport FEE38_02765 PF09335 SNARE associated Golgi protein FEE38_02770 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_02770 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_02775 PF03724 META domain FEE38_02780 PF03891 Domain of unknown function (DUF333) FEE38_02790 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FEE38_02790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_02790 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FEE38_02790 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FEE38_02790 PF10371 Domain of unknown function FEE38_02795 PF00267 Gram-negative porin FEE38_02805 PF00582 Universal stress protein family FEE38_02810 PF01171 PP-loop family FEE38_02815 PF03880 DbpA RNA binding domain FEE38_02815 PF00270 DEAD/DEAH box helicase FEE38_02815 PF00271 Helicase conserved C-terminal domain FEE38_02820 PF01544 CorA-like Mg2+ transporter protein FEE38_02830 PF08220 DeoR-like helix-turn-helix domain FEE38_02830 PF00455 DeoR C terminal sensor domain FEE38_02835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_02835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_02850 PF00324 Amino acid permease FEE38_02855 PF01037 Lrp/AsnC ligand binding domain FEE38_02865 PF00155 Aminotransferase class I and II FEE38_02870 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_02875 PF09383 NIL domain FEE38_02875 PF00005 ABC transporter FEE38_02880 PF03180 NLPA lipoprotein FEE38_02885 PF00155 Aminotransferase class I and II FEE38_02890 PF00107 Zinc-binding dehydrogenase FEE38_02890 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_02895 PF00440 Bacterial regulatory proteins, tetR family FEE38_02910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02910 PF03466 LysR substrate binding domain FEE38_02915 PF03466 LysR substrate binding domain FEE38_02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_02940 PF00440 Bacterial regulatory proteins, tetR family FEE38_03015 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_03015 PF17871 AAA lid domain FEE38_03015 PF07724 AAA domain (Cdc48 subfamily) FEE38_03015 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_03025 PF13488 Glycine zipper FEE38_03025 PF00691 OmpA family FEE38_03050 PF01965 DJ-1/PfpI family FEE38_03060 PF13737 Transposase DDE domain FEE38_03075 PF03466 LysR substrate binding domain FEE38_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03095 PF00248 Aldo/keto reductase family FEE38_03100 PF07690 Major Facilitator Superfamily FEE38_03105 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FEE38_03110 PF03466 LysR substrate binding domain FEE38_03110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_03180 PF00246 Zinc carboxypeptidase FEE38_03185 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FEE38_03185 PF13378 Enolase C-terminal domain-like FEE38_03190 PF08534 Redoxin FEE38_03195 PF05145 Transition state regulatory protein AbrB FEE38_03200 PF00158 Sigma-54 interaction domain FEE38_03200 PF18024 Helix-turn-helix domain FEE38_03205 PF02056 Family 4 glycosyl hydrolase FEE38_03205 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03210 PF03466 LysR substrate binding domain FEE38_03215 PF05128 Domain of unknown function (DUF697) FEE38_03220 PF04317 YcjX-like family, DUF463 FEE38_03225 PF09584 Phage shock protein PspD (Phageshock_PspD) FEE38_03230 PF04024 PspC domain FEE38_03235 PF06667 Phage shock protein B FEE38_03240 PF04012 PspA/IM30 family FEE38_03245 PF00158 Sigma-54 interaction domain FEE38_03245 PF02954 Bacterial regulatory protein, Fis family FEE38_03250 PF07690 Major Facilitator Superfamily FEE38_03255 PF01546 Peptidase family M20/M25/M40 FEE38_03255 PF07687 Peptidase dimerisation domain FEE38_03260 PF12833 Helix-turn-helix domain FEE38_03270 PF13460 NAD(P)H-binding FEE38_03275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_03280 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_03300 PF00313 'Cold-shock' DNA-binding domain FEE38_03305 PF00313 'Cold-shock' DNA-binding domain FEE38_03310 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FEE38_03310 PF06165 Glycosyltransferase family 36 FEE38_03310 PF10091 Putative glucoamylase FEE38_03315 PF03050 Transposase IS66 family FEE38_03315 PF13817 IS66 C-terminal element FEE38_03315 PF13007 Transposase C of IS166 homeodomain FEE38_03315 PF13005 zinc-finger binding domain of transposase IS66 FEE38_03320 PF05717 IS66 Orf2 like protein FEE38_03340 PF03279 Bacterial lipid A biosynthesis acyltransferase FEE38_03345 PF00239 Resolvase, N terminal domain FEE38_03345 PF02796 Helix-turn-helix domain of resolvase FEE38_03410 PF13276 HTH-like domain FEE38_03410 PF00665 Integrase core domain FEE38_03410 PF13333 Integrase core domain FEE38_03575 PF06183 DinI-like family FEE38_03580 PF13737 Transposase DDE domain FEE38_03585 PF00145 C-5 cytosine-specific DNA methylase FEE38_03630 PF06992 Replication protein P FEE38_03660 PF07358 Protein of unknown function (DUF1482) FEE38_03670 PF06630 Enterobacterial exodeoxyribonuclease VIII FEE38_03670 PF12684 PDDEXK-like domain of unknown function (DUF3799) FEE38_03705 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_03705 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_03710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_03710 PF00005 ABC transporter FEE38_03715 PF00005 ABC transporter FEE38_03720 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FEE38_03725 PF05962 HutD FEE38_03740 PF17876 Cold shock domain FEE38_03740 PF00575 S1 RNA binding domain FEE38_03740 PF00773 RNB domain FEE38_03740 PF08206 Ribonuclease B OB domain FEE38_03750 PF00455 DeoR C terminal sensor domain FEE38_03750 PF08220 DeoR-like helix-turn-helix domain FEE38_03755 PF05433 Glycine zipper 2TM domain FEE38_03760 PF01253 Translation initiation factor SUI1 FEE38_03765 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FEE38_03770 PF18073 Rubredoxin metal binding domain FEE38_03775 PF06305 Lipopolysaccharide assembly protein A domain FEE38_03780 PF01569 PAP2 superfamily FEE38_03785 PF00925 GTP cyclohydrolase II FEE38_03790 PF00694 Aconitase C-terminal domain FEE38_03790 PF00330 Aconitase family (aconitate hydratase) FEE38_03800 PF03466 LysR substrate binding domain FEE38_03800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03805 PF01131 DNA topoisomerase FEE38_03805 PF08272 Topoisomerase I zinc-ribbon-like FEE38_03805 PF01396 Topoisomerase DNA binding C4 zinc finger FEE38_03805 PF01751 Toprim domain FEE38_03810 PF10692 Protein of unknown function (DUF2498) FEE38_03815 PF01343 Peptidase family S49 FEE38_03815 PF08496 Peptidase family S49 N-terminal FEE38_03825 PF00106 short chain dehydrogenase FEE38_03830 PF12557 Cob(I)alamin adenosyltransferase N terminal FEE38_03830 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FEE38_03835 PF01479 S4 domain FEE38_03835 PF00849 RNA pseudouridylate synthase FEE38_03840 PF03466 LysR substrate binding domain FEE38_03840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03850 PF01300 Telomere recombination FEE38_03855 PF02811 PHP domain FEE38_03860 PF04715 Anthranilate synthase component I, N terminal region FEE38_03860 PF00425 chorismate binding enzyme FEE38_03865 PF00591 Glycosyl transferase family, a/b domain FEE38_03865 PF02885 Glycosyl transferase family, helical bundle domain FEE38_03865 PF00117 Glutamine amidotransferase class-I FEE38_03870 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FEE38_03870 PF00218 Indole-3-glycerol phosphate synthase FEE38_03875 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_03880 PF00290 Tryptophan synthase alpha chain FEE38_03885 PF13660 Domain of unknown function (DUF4147) FEE38_03885 PF05161 MOFRL family FEE38_03890 PF00180 Isocitrate/isopropylmalate dehydrogenase FEE38_03895 PF07690 Major Facilitator Superfamily FEE38_03900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_03900 PF03466 LysR substrate binding domain FEE38_03920 PF00106 short chain dehydrogenase FEE38_03925 PF07715 TonB-dependent Receptor Plug Domain FEE38_03925 PF00593 TonB dependent receptor FEE38_03930 PF13640 2OG-Fe(II) oxygenase superfamily FEE38_03930 PF18331 PKHD-type hydroxylase C-terminal domain FEE38_03935 PF03922 OmpW family FEE38_03940 PF03692 Putative zinc- or iron-chelating domain FEE38_03950 PF04279 Intracellular septation protein A FEE38_03955 PF07715 TonB-dependent Receptor Plug Domain FEE38_03955 PF00593 TonB dependent receptor FEE38_03960 PF03061 Thioesterase superfamily FEE38_03965 PF14002 YniB-like protein FEE38_03970 PF13419 Haloacid dehalogenase-like hydrolase FEE38_03980 PF04307 LexA-binding, inner membrane-associated putative hydrolase FEE38_03990 PF10729 Cell division activator CedA FEE38_03995 PF00199 Catalase FEE38_03995 PF06628 Catalase-related immune-responsive FEE38_03995 PF18011 C-terminal domain found in long catalases FEE38_04000 PF04794 YdjC-like protein FEE38_04005 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_04005 PF02056 Family 4 glycosyl hydrolase FEE38_04010 PF12833 Helix-turn-helix domain FEE38_04010 PF07883 Cupin domain FEE38_04015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FEE38_04020 PF02378 Phosphotransferase system, EIIC FEE38_04025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_04030 PF04355 SmpA / OmlA family FEE38_04035 PF02540 NAD synthase FEE38_04045 PF07813 LTXXQ motif family protein FEE38_04050 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FEE38_04055 PF04996 Succinylarginine dihydrolase FEE38_04060 PF00171 Aldehyde dehydrogenase family FEE38_04065 PF04958 Arginine N-succinyltransferase beta subunit FEE38_04070 PF00202 Aminotransferase class-III FEE38_04075 PF03372 Endonuclease/Exonuclease/phosphatase family FEE38_04080 PF09335 SNARE associated Golgi protein FEE38_04085 PF09335 SNARE associated Golgi protein FEE38_04090 PF02627 Carboxymuconolactone decarboxylase family FEE38_04095 PF13416 Bacterial extracellular solute-binding protein FEE38_04100 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_04105 PF00005 ABC transporter FEE38_04110 PF00581 Rhodanese-like domain FEE38_04115 PF01066 CDP-alcohol phosphatidyltransferase FEE38_04120 PF00293 NUDIX domain FEE38_04125 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FEE38_04125 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FEE38_04135 PF01131 DNA topoisomerase FEE38_04135 PF01751 Toprim domain FEE38_04140 PF02769 AIR synthase related protein, C-terminal domain FEE38_04140 PF00586 AIR synthase related protein, N-terminal domain FEE38_04145 PF01569 PAP2 superfamily FEE38_04150 PF00881 Nitroreductase family FEE38_04155 PF01343 Peptidase family S49 FEE38_04160 PF00710 Asparaginase, N-terminal FEE38_04160 PF17763 Glutaminase/Asparaginase C-terminal domain FEE38_04165 PF00857 Isochorismatase family FEE38_04170 PF00083 Sugar (and other) transporter FEE38_04175 PF13737 Transposase DDE domain FEE38_04180 PF00455 DeoR C terminal sensor domain FEE38_04180 PF08220 DeoR-like helix-turn-helix domain FEE38_04185 PF00248 Aldo/keto reductase family FEE38_04190 PF00294 pfkB family carbohydrate kinase FEE38_04195 PF01116 Fructose-bisphosphate aldolase class-II FEE38_04200 PF00107 Zinc-binding dehydrogenase FEE38_04200 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_04205 PF00083 Sugar (and other) transporter FEE38_04210 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_04210 PF00107 Zinc-binding dehydrogenase FEE38_04215 PF00041 Fibronectin type III domain FEE38_04215 PF00704 Glycosyl hydrolases family 18 FEE38_04220 PF01844 HNH endonuclease FEE38_04225 PF07023 Protein of unknown function (DUF1315) FEE38_04230 PF01641 SelR domain FEE38_04235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FEE38_04235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FEE38_04240 PF01263 Aldose 1-epimerase FEE38_04245 PF00248 Aldo/keto reductase family FEE38_04250 PF06629 MltA-interacting protein MipA FEE38_04255 PF08298 PrkA AAA domain FEE38_04255 PF06798 PrkA serine protein kinase C-terminal domain FEE38_04260 PF04285 Protein of unknown function (DUF444) FEE38_04270 PF00255 Glutathione peroxidase FEE38_04280 PF03466 LysR substrate binding domain FEE38_04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_04285 PF07690 Major Facilitator Superfamily FEE38_04295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_04295 PF03466 LysR substrate binding domain FEE38_04300 PF11799 impB/mucB/samB family C-terminal domain FEE38_04300 PF11798 IMS family HHH motif FEE38_04300 PF13438 Domain of unknown function (DUF4113) FEE38_04300 PF00817 impB/mucB/samB family FEE38_04305 PF00717 Peptidase S24-like FEE38_04310 PF06183 DinI-like family FEE38_04315 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FEE38_04320 PF04073 Aminoacyl-tRNA editing domain FEE38_04325 PF04284 Protein of unknown function (DUF441) FEE38_04330 PF02311 AraC-like ligand binding domain FEE38_04330 PF12833 Helix-turn-helix domain FEE38_04335 PF07690 Major Facilitator Superfamily FEE38_04340 PF00117 Glutamine amidotransferase class-I FEE38_04340 PF06418 CTP synthase N-terminus FEE38_04345 PF04463 Protein of unknown function (DUF523) FEE38_04350 PF04343 Protein of unknown function, DUF488 FEE38_04355 PF03891 Domain of unknown function (DUF333) FEE38_04360 PF13185 GAF domain FEE38_04360 PF00990 Diguanylate cyclase, GGDEF domain FEE38_04380 PF10749 Protein of unknown function (DUF2534) FEE38_04385 PF01810 LysE type translocator FEE38_04390 PF03279 Bacterial lipid A biosynthesis acyltransferase FEE38_04395 PF00710 Asparaginase, N-terminal FEE38_04395 PF17763 Glutaminase/Asparaginase C-terminal domain FEE38_04400 PF01966 HD domain FEE38_04405 PF00990 Diguanylate cyclase, GGDEF domain FEE38_04410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_04410 PF03466 LysR substrate binding domain FEE38_04415 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FEE38_04440 PF02322 Cytochrome bd terminal oxidase subunit II FEE38_04445 PF01654 Cytochrome bd terminal oxidase subunit I FEE38_04450 PF05067 Manganese containing catalase FEE38_04455 PF05974 Domain of unknown function (DUF892) FEE38_04460 PF05974 Domain of unknown function (DUF892) FEE38_04465 PF10685 Stress-induced bacterial acidophilic repeat motif FEE38_04470 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_04470 PF13823 Alcohol dehydrogenase GroES-associated FEE38_04470 PF00107 Zinc-binding dehydrogenase FEE38_04475 PF06906 Protein of unknown function (DUF1272) FEE38_04500 PF00180 Isocitrate/isopropylmalate dehydrogenase FEE38_04505 PF00849 RNA pseudouridylate synthase FEE38_04510 PF00293 NUDIX domain FEE38_04520 PF04356 Protein of unknown function (DUF489) FEE38_04525 PF08328 Adenylosuccinate lyase C-terminal FEE38_04525 PF00206 Lyase FEE38_04540 PF00072 Response regulator receiver domain FEE38_04540 PF00486 Transcriptional regulatory protein, C terminal FEE38_04545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_04545 PF08918 PhoQ Sensor FEE38_04550 PF08007 Cupin superfamily protein FEE38_04555 PF07687 Peptidase dimerisation domain FEE38_04555 PF01546 Peptidase family M20/M25/M40 FEE38_04560 PF08402 TOBE domain FEE38_04560 PF00005 ABC transporter FEE38_04565 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_04570 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_04575 PF13416 Bacterial extracellular solute-binding protein FEE38_04585 PF13193 AMP-binding enzyme C-terminal domain FEE38_04585 PF00501 AMP-binding enzyme FEE38_04590 PF02780 Transketolase, C-terminal domain FEE38_04590 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_04590 PF02779 Transketolase, pyrimidine binding domain FEE38_04595 PF00923 Transaldolase/Fructose-6-phosphate aldolase FEE38_04600 PF02502 Ribose/Galactose Isomerase FEE38_04605 PF03829 PTS system glucitol/sorbitol-specific IIA component FEE38_04610 PF03812 2-keto-3-deoxygluconate permease FEE38_04615 PF17042 Nucleotide-binding C-terminal domain FEE38_04615 PF07005 Sugar-binding N-terminal domain FEE38_04620 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FEE38_04625 PF00121 Triosephosphate isomerase FEE38_04630 PF04198 Putative sugar-binding domain FEE38_04640 PF02146 Sir2 family FEE38_04645 PF00480 ROK family FEE38_04650 PF12704 MacB-like periplasmic core domain FEE38_04650 PF02687 FtsX-like permease family FEE38_04655 PF00005 ABC transporter FEE38_04660 PF02687 FtsX-like permease family FEE38_04660 PF12704 MacB-like periplasmic core domain FEE38_04665 PF02559 CarD-like/TRCF domain FEE38_04665 PF00270 DEAD/DEAH box helicase FEE38_04665 PF00271 Helicase conserved C-terminal domain FEE38_04665 PF03461 TRCF domain FEE38_04665 PF17757 UvrB interaction domain FEE38_04670 PF17969 L,D-transpeptidase C-terminal domain FEE38_04670 PF01476 LysM domain FEE38_04670 PF03734 L,D-transpeptidase catalytic domain FEE38_04675 PF07338 Protein of unknown function (DUF1471) FEE38_04680 PF00440 Bacterial regulatory proteins, tetR family FEE38_04685 PF00593 TonB dependent receptor FEE38_04685 PF07715 TonB-dependent Receptor Plug Domain FEE38_04690 PF05433 Glycine zipper 2TM domain FEE38_04695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_04700 PF05728 Uncharacterised protein family (UPF0227) FEE38_04705 PF00933 Glycosyl hydrolase family 3 N terminal domain FEE38_04710 PF01636 Phosphotransferase enzyme family FEE38_04715 PF13036 Peptidoglycan-synthase activator LpoB FEE38_04720 PF07233 Protein of unknown function (DUF1425) FEE38_04725 PF01230 HIT domain FEE38_04730 PF00367 phosphotransferase system, EIIB FEE38_04730 PF02378 Phosphotransferase system, EIIC FEE38_04735 PF01026 TatD related DNase FEE38_04740 PF09115 DNA polymerase III, delta subunit, C terminal FEE38_04745 PF02223 Thymidylate kinase FEE38_04750 PF02618 YceG-like family FEE38_04755 PF01063 Amino-transferase class IV FEE38_04760 PF02801 Beta-ketoacyl synthase, C-terminal domain FEE38_04760 PF00109 Beta-ketoacyl synthase, N-terminal domain FEE38_04765 PF00550 Phosphopantetheine attachment site FEE38_04775 PF00698 Acyl transferase domain FEE38_04780 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FEE38_04780 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FEE38_04785 PF02504 Fatty acid synthesis protein FEE38_04790 PF01783 Ribosomal L32p protein family FEE38_04795 PF02620 Large ribosomal RNA subunit accumulation protein YceD FEE38_04800 PF02545 Maf-like protein FEE38_04805 PF01479 S4 domain FEE38_04805 PF00849 RNA pseudouridylate synthase FEE38_04810 PF00575 S1 RNA binding domain FEE38_04810 PF12111 Polyribonucleotide phosphorylase C terminal FEE38_04810 PF10150 Ribonuclease E/G family FEE38_04815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_04815 PF03466 LysR substrate binding domain FEE38_04820 PF07690 Major Facilitator Superfamily FEE38_04825 PF03023 Lipid II flippase MurJ FEE38_04830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_04835 PF04337 Protein of unknown function, DUF480 FEE38_04840 PF13302 Acetyltransferase (GNAT) domain FEE38_04845 PF07690 Major Facilitator Superfamily FEE38_04850 PF07273 Protein of unknown function (DUF1439) FEE38_04855 PF01979 Amidohydrolase family FEE38_04860 PF06183 DinI-like family FEE38_04870 PF13991 BssS protein family FEE38_04875 PF01266 FAD dependent oxidoreductase FEE38_04880 PF10968 Protein of unknown function (DUF2770) FEE38_04890 PF03279 Bacterial lipid A biosynthesis acyltransferase FEE38_04895 PF07690 Major Facilitator Superfamily FEE38_04900 PF13984 MsyB protein FEE38_04905 PF07119 Protein of unknown function (DUF1375) FEE38_04910 PF00535 Glycosyl transferase family 2 FEE38_04915 PF04349 Periplasmic glucan biosynthesis protein, MdoG FEE38_04920 PF01757 Acyltransferase family FEE38_04925 PF00440 Bacterial regulatory proteins, tetR family FEE38_04925 PF13977 BetI-type transcriptional repressor, C-terminal FEE38_04930 PF01661 Macro domain FEE38_04935 PF06496 Protein of unknown function (DUF1097) FEE38_04940 PF02613 Nitrate reductase delta subunit FEE38_04945 PF02811 PHP domain FEE38_04950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_04960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_04960 PF03466 LysR substrate binding domain FEE38_04965 PF05726 Pirin C-terminal cupin domain FEE38_04965 PF02678 Pirin FEE38_04970 PF00857 Isochorismatase family FEE38_04985 PF02562 PhoH-like protein FEE38_04990 PF04261 Dyp-type peroxidase family FEE38_04995 PF09375 Imelysin FEE38_04995 PF13473 Cupredoxin-like domain FEE38_05000 PF03239 Iron permease FTR1 family FEE38_05005 PF07662 Na+ dependent nucleoside transporter C-terminus FEE38_05005 PF07670 Nucleoside recognition FEE38_05005 PF01773 Na+ dependent nucleoside transporter N-terminus FEE38_05015 PF00474 Sodium:solute symporter family FEE38_05020 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FEE38_05020 PF01619 Proline dehydrogenase FEE38_05020 PF00171 Aldehyde dehydrogenase family FEE38_05020 PF14850 DNA-binding domain of Proline dehydrogenase FEE38_05030 PF08362 YcdC-like protein, C-terminal region FEE38_05030 PF00440 Bacterial regulatory proteins, tetR family FEE38_05035 PF00296 Luciferase-like monooxygenase FEE38_05040 PF00857 Isochorismatase family FEE38_05045 PF01042 Endoribonuclease L-PSP FEE38_05050 PF00561 alpha/beta hydrolase fold FEE38_05055 PF00881 Nitroreductase family FEE38_05060 PF01613 Flavin reductase like domain FEE38_05065 PF00860 Permease family FEE38_05075 PF10685 Stress-induced bacterial acidophilic repeat motif FEE38_05080 PF03358 NADPH-dependent FMN reductase FEE38_05085 PF13993 YccJ-like protein FEE38_05090 PF00328 Histidine phosphatase superfamily (branch 2) FEE38_05095 PF01638 HxlR-like helix-turn-helix FEE38_05115 PF00324 Amino acid permease FEE38_05125 PF00120 Glutamine synthetase, catalytic domain FEE38_05130 PF07722 Peptidase C26 FEE38_05135 PF07883 Cupin domain FEE38_05135 PF01381 Helix-turn-helix FEE38_05140 PF00171 Aldehyde dehydrogenase family FEE38_05145 PF01266 FAD dependent oxidoreductase FEE38_05150 PF03466 LysR substrate binding domain FEE38_05150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_05155 PF00180 Isocitrate/isopropylmalate dehydrogenase FEE38_05160 PF02028 BCCT, betaine/carnitine/choline family transporter FEE38_05165 PF00355 Rieske [2Fe-2S] domain FEE38_05165 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FEE38_05170 PF00171 Aldehyde dehydrogenase family FEE38_05175 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_05175 PF00175 Oxidoreductase NAD-binding domain FEE38_05175 PF00970 Oxidoreductase FAD-binding domain FEE38_05185 PF00563 EAL domain FEE38_05185 PF12792 CSS motif domain associated with EAL FEE38_05200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_05205 PF01027 Inhibitor of apoptosis-promoting Bax1 FEE38_05210 PF04358 DsrC like protein FEE38_05215 PF00708 Acylphosphatase FEE38_05220 PF12833 Helix-turn-helix domain FEE38_05225 PF01161 Phosphatidylethanolamine-binding protein FEE38_05230 PF10672 S-adenosylmethionine-dependent methyltransferase FEE38_05230 PF17785 PUA-like domain FEE38_05235 PF08755 Hemimethylated DNA-binding protein YccV like FEE38_05240 PF13380 CoA binding domain FEE38_05245 PF02142 MGS-like domain FEE38_05250 PF00580 UvrD/REP helicase N-terminal domain FEE38_05250 PF13361 UvrD-like helicase C-terminal domain FEE38_05250 PF12462 DNA helicase IV / RNA helicase N terminal FEE38_05255 PF03733 Inner membrane component domain FEE38_05260 PF12805 FUSC-like inner membrane protein yccS FEE38_05265 PF04994 TfoX C-terminal domain FEE38_05265 PF04993 TfoX N-terminal domain FEE38_05275 PF03846 Cell division inhibitor SulA FEE38_05280 PF01389 OmpA-like transmembrane domain FEE38_05280 PF00691 OmpA family FEE38_05285 PF06303 MatP N-terminal domain FEE38_05285 PF17414 MatP C-terminal ribbon-helix-helix domain FEE38_05290 PF05362 Lon protease (S16) C-terminal proteolytic domain FEE38_05290 PF13654 AAA domain FEE38_05295 PF07977 FabA-like domain FEE38_05300 PF04957 Ribosome modulation factor FEE38_05305 PF03886 ABC-type transport auxiliary lipoprotein component FEE38_05310 PF02470 MlaD protein FEE38_05315 PF04403 Paraquat-inducible protein A FEE38_05320 PF16326 ABC transporter C-terminal domain FEE38_05320 PF00005 ABC transporter FEE38_05320 PF12848 ABC transporter FEE38_05325 PF10672 S-adenosylmethionine-dependent methyltransferase FEE38_05325 PF02926 THUMP domain FEE38_05325 PF01170 Putative RNA methylase family UPF0020 FEE38_05330 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_05330 PF03473 MOSC domain FEE38_05330 PF03476 MOSC N-terminal beta barrel domain FEE38_05335 PF07126 Cell-division protein ZapC FEE38_05340 PF01180 Dihydroorotate dehydrogenase FEE38_05345 PF03358 NADPH-dependent FMN reductase FEE38_05350 PF09084 NMT1/THI5 like FEE38_05355 PF00296 Luciferase-like monooxygenase FEE38_05360 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05365 PF00005 ABC transporter FEE38_05370 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FEE38_05370 PF11940 Domain of unknown function (DUF3458) Ig-like fold FEE38_05370 PF01433 Peptidase family M1 domain FEE38_05375 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FEE38_05375 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FEE38_05380 PF07687 Peptidase dimerisation domain FEE38_05380 PF01546 Peptidase family M20/M25/M40 FEE38_05385 PF07687 Peptidase dimerisation domain FEE38_05385 PF01546 Peptidase family M20/M25/M40 FEE38_05395 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_05400 PF01037 Lrp/AsnC ligand binding domain FEE38_05405 PF01336 OB-fold nucleic acid binding domain FEE38_05405 PF00152 tRNA synthetases class II (D, K and N) FEE38_05410 PF00267 Gram-negative porin FEE38_05415 PF00155 Aminotransferase class I and II FEE38_05420 PF00753 Metallo-beta-lactamase superfamily FEE38_05425 PF05951 Bacterial protein of unknown function (DUF882) FEE38_05430 PF03734 L,D-transpeptidase catalytic domain FEE38_05430 PF01471 Putative peptidoglycan binding domain FEE38_05435 PF16330 MukB hinge domain FEE38_05435 PF04310 MukB N-terminal FEE38_05440 PF04288 MukE-like family FEE38_05445 PF03882 MukF winged-helix domain FEE38_05445 PF17192 MukF middle domain FEE38_05445 PF17193 MukF C-terminal domain FEE38_05450 PF13847 Methyltransferase domain FEE38_05455 PF02698 DUF218 domain FEE38_05460 PF01636 Phosphotransferase enzyme family FEE38_05465 PF02348 Cytidylyltransferase FEE38_05470 PF03966 Trm112p-like protein FEE38_05475 PF06224 Winged helix DNA-binding domain FEE38_05480 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FEE38_05485 PF00664 ABC transporter transmembrane region FEE38_05485 PF00005 ABC transporter FEE38_05490 PF00753 Metallo-beta-lactamase superfamily FEE38_05490 PF03772 Competence protein FEE38_05495 PF00216 Bacterial DNA-binding protein FEE38_05500 PF00575 S1 RNA binding domain FEE38_05505 PF02224 Cytidylate kinase FEE38_05510 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FEE38_05515 PF00266 Aminotransferase class-V FEE38_05520 PF04239 Protein of unknown function (DUF421) FEE38_05525 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FEE38_05525 PF18381 YcaO cyclodehydratase C-terminal domain FEE38_05530 PF01226 Formate/nitrite transporter FEE38_05535 PF02901 Pyruvate formate lyase-like FEE38_05535 PF01228 Glycine radical FEE38_05540 PF04055 Radical SAM superfamily FEE38_05545 PF07690 Major Facilitator Superfamily FEE38_05555 PF04976 DMSO reductase anchor subunit (DmsC) FEE38_05560 PF13247 4Fe-4S dicluster domain FEE38_05560 PF12800 4Fe-4S binding domain FEE38_05565 PF01568 Molydopterin dinucleotide binding domain FEE38_05565 PF00384 Molybdopterin oxidoreductase FEE38_05565 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FEE38_05570 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FEE38_05570 PF02403 Seryl-tRNA synthetase N-terminal domain FEE38_05575 PF16193 AAA C-terminal domain FEE38_05575 PF12002 MgsA AAA+ ATPase C terminal FEE38_05575 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_05580 PF03548 Outer membrane lipoprotein carrier protein LolA FEE38_05585 PF17854 FtsK alpha domain FEE38_05585 PF09397 Ftsk gamma domain FEE38_05585 PF01580 FtsK/SpoIIIE family FEE38_05585 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FEE38_05590 PF01037 Lrp/AsnC ligand binding domain FEE38_05595 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_05600 PF00005 ABC transporter FEE38_05600 PF00664 ABC transporter transmembrane region FEE38_05605 PF00005 ABC transporter FEE38_05605 PF00664 ABC transporter transmembrane region FEE38_05610 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FEE38_05615 PF01176 Translation initiation factor 1A / IF-1 FEE38_05620 PF07724 AAA domain (Cdc48 subfamily) FEE38_05620 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_05620 PF17871 AAA lid domain FEE38_05620 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_05620 PF02861 Clp amino terminal domain, pathogenicity island component FEE38_05625 PF02617 ATP-dependent Clp protease adaptor protein ClpS FEE38_05630 PF00313 'Cold-shock' DNA-binding domain FEE38_05635 PF00005 ABC transporter FEE38_05635 PF12704 MacB-like periplasmic core domain FEE38_05635 PF02687 FtsX-like permease family FEE38_05640 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_05645 PF11398 Protein of unknown function (DUF2813) FEE38_05650 PF00230 Major intrinsic protein FEE38_05655 PF03956 Lysine exporter LysO FEE38_05660 PF03063 Prismane/CO dehydrogenase family FEE38_05665 PF00175 Oxidoreductase NAD-binding domain FEE38_05665 PF00970 Oxidoreductase FAD-binding domain FEE38_05665 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_05675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_05675 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_05675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_05680 PF01212 Beta-eliminating lyase FEE38_05685 PF13460 NAD(P)H-binding FEE38_05685 PF11066 Protein of unknown function (DUF2867) FEE38_05690 PF01370 NAD dependent epimerase/dehydratase family FEE38_05695 PF01510 N-acetylmuramoyl-L-alanine amidase FEE38_05700 PF00563 EAL domain FEE38_05700 PF01590 GAF domain FEE38_05700 PF00990 Diguanylate cyclase, GGDEF domain FEE38_05700 PF00360 Phytochrome region FEE38_05705 PF12883 Protein of unknown function (DUF3828) FEE38_05710 PF00005 ABC transporter FEE38_05715 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_05720 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05725 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05730 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_05735 PF00989 PAS fold FEE38_05735 PF00512 His Kinase A (phospho-acceptor) domain FEE38_05735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_05735 PF16736 Single Cache-like FEE38_05740 PF00486 Transcriptional regulatory protein, C terminal FEE38_05740 PF00072 Response regulator receiver domain FEE38_05745 PF05958 tRNA (Uracil-5-)-methyltransferase FEE38_05750 PF10767 Protein of unknown function (DUF2593) FEE38_05755 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05760 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05765 PF00005 ABC transporter FEE38_05765 PF08402 TOBE domain FEE38_05770 PF13416 Bacterial extracellular solute-binding protein FEE38_05775 PF10722 Putative bacterial sensory transduction regulator FEE38_05780 PF08443 RimK-like ATP-grasp domain FEE38_05780 PF18030 RimK PreATP-grasp domain FEE38_05785 PF00881 Nitroreductase family FEE38_05790 PF07214 Protein of unknown function (DUF1418) FEE38_05795 PF00462 Glutaredoxin FEE38_05800 PF11045 Putative inner membrane protein of Enterobacteriaceae FEE38_05805 PF06826 Predicted Permease Membrane Region FEE38_05805 PF02080 TrkA-C domain FEE38_05810 PF00440 Bacterial regulatory proteins, tetR family FEE38_05815 PF07690 Major Facilitator Superfamily FEE38_05825 PF07690 Major Facilitator Superfamily FEE38_05835 PF01569 PAP2 superfamily FEE38_05840 PF00455 DeoR C terminal sensor domain FEE38_05840 PF08220 DeoR-like helix-turn-helix domain FEE38_05845 PF00768 D-alanyl-D-alanine carboxypeptidase FEE38_05845 PF07943 Penicillin-binding protein 5, C-terminal domain FEE38_05850 PF13737 Transposase DDE domain FEE38_05855 PF13417 Glutathione S-transferase, N-terminal domain FEE38_05855 PF00043 Glutathione S-transferase, C-terminal domain FEE38_05860 PF07995 Glucose / Sorbosone dehydrogenase FEE38_05865 PF10799 Biofilm formation protein (YliH/bssR) FEE38_05870 PF01306 LacY proton/sugar symporter FEE38_05875 PF04055 Radical SAM superfamily FEE38_05875 PF18693 TRAM domain FEE38_05875 PF00919 Uncharacterized protein family UPF0004 FEE38_05880 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05880 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_05885 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_05890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_05895 PF00005 ABC transporter FEE38_05895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_05900 PF01112 Asparaginase FEE38_05905 PF03454 MoeA C-terminal region (domain IV) FEE38_05905 PF03453 MoeA N-terminal region (domain I and II) FEE38_05905 PF00994 Probable molybdopterin binding domain FEE38_05910 PF00899 ThiF family FEE38_05915 PF04055 Radical SAM superfamily FEE38_05920 PF01228 Glycine radical FEE38_05920 PF02901 Pyruvate formate lyase-like FEE38_05930 PF07350 Protein of unknown function (DUF1479) FEE38_05935 PF00356 Bacterial regulatory proteins, lacI family FEE38_05945 PF01055 Glycosyl hydrolases family 31 FEE38_05945 PF16338 Domain of unknown function (DUF4968) FEE38_05945 PF13802 Galactose mutarotase-like FEE38_05945 PF17137 Domain of unknown function (DUF5110) FEE38_05950 PF12848 ABC transporter FEE38_05950 PF00005 ABC transporter FEE38_05955 PF13350 Tyrosine phosphatase family FEE38_05960 PF17969 L,D-transpeptidase C-terminal domain FEE38_05960 PF03734 L,D-transpeptidase catalytic domain FEE38_05965 PF00392 Bacterial regulatory proteins, gntR family FEE38_05965 PF07702 UTRA domain FEE38_05970 PF00232 Glycosyl hydrolase family 1 FEE38_05975 PF03600 Citrate transporter FEE38_05980 PF02742 Iron dependent repressor, metal binding and dimerisation domain FEE38_05980 PF01325 Iron dependent repressor, N-terminal DNA binding domain FEE38_05990 PF00884 Sulfatase FEE38_05995 PF13505 Outer membrane protein beta-barrel domain FEE38_06000 PF00892 EamA-like transporter family FEE38_06005 PF00210 Ferritin-like domain FEE38_06010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_06015 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_06020 PF00005 ABC transporter FEE38_06025 PF00924 Mechanosensitive ion channel FEE38_06030 PF05971 RNA methyltransferase FEE38_06035 PF01613 Flavin reductase like domain FEE38_06045 PF01258 Prokaryotic dksA/traR C4-type zinc finger FEE38_06050 PF07338 Protein of unknown function (DUF1471) FEE38_06055 PF02885 Glycosyl transferase family, helical bundle domain FEE38_06060 PF13307 Helicase C-terminal domain FEE38_06060 PF00270 DEAD/DEAH box helicase FEE38_06060 PF06733 DEAD_2 FEE38_06065 PF00271 Helicase conserved C-terminal domain FEE38_06065 PF00270 DEAD/DEAH box helicase FEE38_06070 PF02779 Transketolase, pyrimidine binding domain FEE38_06070 PF02780 Transketolase, C-terminal domain FEE38_06075 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_06085 PF07690 Major Facilitator Superfamily FEE38_06090 PF03466 LysR substrate binding domain FEE38_06090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_06095 PF09209 Tetracyclin repressor-like, C-terminal domain FEE38_06095 PF00440 Bacterial regulatory proteins, tetR family FEE38_06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_06105 PF00005 ABC transporter FEE38_06120 PF11076 Putative inner membrane protein YbhQ FEE38_06125 PF03372 Endonuclease/Exonuclease/phosphatase family FEE38_06130 PF13091 PLD-like domain FEE38_06135 PF03706 Lysylphosphatidylglycerol synthase TM region FEE38_06145 PF01027 Inhibitor of apoptosis-promoting Bax1 FEE38_06150 PF02391 MoaE protein FEE38_06155 PF02597 ThiS family FEE38_06160 PF01967 MoaC family FEE38_06165 PF00994 Probable molybdopterin binding domain FEE38_06170 PF06463 Molybdenum Cofactor Synthesis C FEE38_06170 PF04055 Radical SAM superfamily FEE38_06180 PF01933 Uncharacterised protein family UPF0052 FEE38_06185 PF00884 Sulfatase FEE38_06185 PF08019 Phosphoethanolamine transferase EptA/EptB FEE38_06190 PF00486 Transcriptional regulatory protein, C terminal FEE38_06190 PF00072 Response regulator receiver domain FEE38_06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_06195 PF00512 His Kinase A (phospho-acceptor) domain FEE38_06205 PF00271 Helicase conserved C-terminal domain FEE38_06205 PF04851 Type III restriction enzyme, res subunit FEE38_06205 PF17757 UvrB interaction domain FEE38_06205 PF02151 UvrB/uvrC motif FEE38_06205 PF12344 Ultra-violet resistance protein B FEE38_06220 PF00005 ABC transporter FEE38_06230 PF08241 Methyltransferase domain FEE38_06235 PF00155 Aminotransferase class I and II FEE38_06240 PF04055 Radical SAM superfamily FEE38_06240 PF06968 Biotin and Thiamin Synthesis associated domain FEE38_06245 PF00202 Aminotransferase class-III FEE38_06250 PF01161 Phosphatidylethanolamine-binding protein FEE38_06255 PF00324 Amino acid permease FEE38_06260 PF00221 Aromatic amino acid lyase FEE38_06265 PF01175 Urocanase Rossmann-like domain FEE38_06265 PF17392 Urocanase C-terminal domain FEE38_06265 PF17391 Urocanase N-terminal domain FEE38_06270 PF07702 UTRA domain FEE38_06270 PF00392 Bacterial regulatory proteins, gntR family FEE38_06275 PF00491 Arginase family FEE38_06280 PF01979 Amidohydrolase family FEE38_06285 PF01095 Pectinesterase FEE38_06290 PF01609 Transposase DDE domain FEE38_06295 PF00690 Cation transporter/ATPase, N-terminus FEE38_06295 PF00689 Cation transporting ATPase, C-terminus FEE38_06300 PF00582 Universal stress protein family FEE38_06305 PF13533 Biotin-lipoyl like FEE38_06310 PF00873 AcrB/AcrD/AcrF family FEE38_06335 PF13411 MerR HTH family regulatory protein FEE38_06340 PF04940 Sensors of blue-light using FAD FEE38_06340 PF00563 EAL domain FEE38_06345 PF10798 Biofilm development protein YmgB/AriR FEE38_06355 PF10798 Biofilm development protein YmgB/AriR FEE38_06360 PF10282 Lactonase, 7-bladed beta-propeller FEE38_06370 PF03459 TOBE domain FEE38_06370 PF00005 ABC transporter FEE38_06375 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_06385 PF10766 Multidrug efflux pump-associated protein AcrZ FEE38_06390 PF03459 TOBE domain FEE38_06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_06395 PF00005 ABC transporter FEE38_06400 PF16363 GDP-mannose 4,6 dehydratase FEE38_06405 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FEE38_06405 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FEE38_06410 PF08544 GHMP kinases C terminal FEE38_06410 PF10509 Galactokinase galactose-binding signature FEE38_06410 PF00288 GHMP kinases N terminal domain FEE38_06415 PF01263 Aldose 1-epimerase FEE38_06420 PF00300 Histidine phosphatase superfamily (branch 1) FEE38_06425 PF00793 DAHP synthetase I family FEE38_06430 PF13985 YbgS-like protein FEE38_06435 PF01545 Cation efflux family FEE38_06440 PF04973 Nicotinamide mononucleotide transporter FEE38_06445 PF02445 Quinolinate synthetase A protein FEE38_06490 PF13174 Tetratricopeptide repeat FEE38_06490 PF16331 TolA binding protein trimerisation FEE38_06495 PF00691 OmpA family FEE38_06500 PF04052 TolB amino-terminal domain FEE38_06500 PF07676 WD40-like Beta Propeller Repeat FEE38_06505 PF06519 TolA C-terminal FEE38_06510 PF02472 Biopolymer transport protein ExbD/TolR FEE38_06515 PF01618 MotA/TolQ/ExbB proton channel family FEE38_06520 PF03061 Thioesterase superfamily FEE38_06525 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FEE38_06530 PF08173 Membrane bound YbgT-like protein FEE38_06535 PF02322 Cytochrome bd terminal oxidase subunit II FEE38_06540 PF01654 Cytochrome bd terminal oxidase subunit I FEE38_06545 PF02629 CoA binding domain FEE38_06545 PF00549 CoA-ligase FEE38_06550 PF08442 ATP-grasp domain FEE38_06550 PF00549 CoA-ligase FEE38_06555 PF02817 e3 binding domain FEE38_06555 PF00364 Biotin-requiring enzyme FEE38_06555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FEE38_06560 PF02779 Transketolase, pyrimidine binding domain FEE38_06560 PF16870 2-oxoglutarate dehydrogenase C-terminal FEE38_06560 PF00676 Dehydrogenase E1 component FEE38_06560 PF16078 2-oxoglutarate dehydrogenase N-terminus FEE38_06565 PF13085 2Fe-2S iron-sulfur cluster binding domain FEE38_06570 PF02910 Fumarate reductase flavoprotein C-term FEE38_06570 PF00890 FAD binding domain FEE38_06575 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FEE38_06580 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FEE38_06585 PF00285 Citrate synthase, C-terminal domain FEE38_06590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FEE38_06590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FEE38_06590 PF06827 Zinc finger found in FPG and IleRS FEE38_06595 PF01470 Pyroglutamyl peptidase FEE38_06610 PF03746 LamB/YcsF family FEE38_06615 PF02626 Carboxyltransferase domain, subdomain A and B FEE38_06620 PF02682 Carboxyltransferase domain, subdomain C and D FEE38_06625 PF01784 NIF3 (NGG1p interacting factor 3) FEE38_06630 PF00854 POT family FEE38_06635 PF03441 FAD binding domain of DNA photolyase FEE38_06635 PF00875 DNA photolyase FEE38_06640 PF10725 Protein of unknown function (DUF2517) FEE38_06645 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FEE38_06650 PF03814 Potassium-transporting ATPase A subunit FEE38_06660 PF02669 K+-transporting ATPase, c chain FEE38_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_06665 PF00512 His Kinase A (phospho-acceptor) domain FEE38_06665 PF02702 Osmosensitive K+ channel His kinase sensor domain FEE38_06665 PF13493 Domain of unknown function (DUF4118) FEE38_06665 PF13492 GAF domain FEE38_06670 PF00486 Transcriptional regulatory protein, C terminal FEE38_06670 PF00072 Response regulator receiver domain FEE38_06680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FEE38_06680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FEE38_06680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FEE38_06680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FEE38_06685 PF17206 SeqA protein N-terminal domain FEE38_06685 PF03925 SeqA protein C-terminal domain FEE38_06690 PF12697 Alpha/beta hydrolase family FEE38_06695 PF01402 Ribbon-helix-helix protein, copG family FEE38_06700 PF00258 Flavodoxin FEE38_06705 PF01475 Ferric uptake regulator family FEE38_06710 PF07690 Major Facilitator Superfamily FEE38_06715 PF13982 YbfN-like lipoprotein FEE38_06720 PF03573 outer membrane porin, OprD family FEE38_06730 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FEE38_06730 PF00749 tRNA synthetases class I (E and Q), catalytic domain FEE38_06735 PF00367 phosphotransferase system, EIIB FEE38_06735 PF02378 Phosphotransferase system, EIIC FEE38_06735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FEE38_06740 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FEE38_06745 PF01979 Amidohydrolase family FEE38_06750 PF01047 MarR family FEE38_06750 PF00480 ROK family FEE38_06755 PF13344 Haloacid dehalogenase-like hydrolase FEE38_06760 PF00733 Asparagine synthase FEE38_06760 PF13537 Glutamine amidotransferase domain FEE38_06805 PF01494 FAD binding domain FEE38_06810 PF04055 Radical SAM superfamily FEE38_06810 PF01938 TRAM domain FEE38_06810 PF00919 Uncharacterized protein family UPF0004 FEE38_06815 PF02562 PhoH-like protein FEE38_06820 PF02130 Uncharacterized protein family UPF0054 FEE38_06825 PF00571 CBS domain FEE38_06825 PF03471 Transporter associated domain FEE38_06830 PF00795 Carbon-nitrogen hydrolase FEE38_06835 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_06840 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_06845 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_06850 PF00005 ABC transporter FEE38_06855 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FEE38_06855 PF17287 POTRA domain FEE38_06855 PF08479 POTRA domain, ShlB-type FEE38_06865 PF07295 Zinc-ribbon containing domain FEE38_06870 PF08264 Anticodon-binding domain of tRNA FEE38_06870 PF00133 tRNA synthetases class I (I, L, M and V) FEE38_06870 PF13603 Leucyl-tRNA synthetase, Domain 2 FEE38_06875 PF04390 Lipopolysaccharide-assembly FEE38_06880 PF06144 DNA polymerase III, delta subunit FEE38_06880 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FEE38_06885 PF01467 Cytidylyltransferase-like FEE38_06890 PF00300 Histidine phosphatase superfamily (branch 1) FEE38_06900 PF02590 Predicted SPOUT methyltransferase FEE38_06905 PF03717 Penicillin-binding Protein dimerisation domain FEE38_06905 PF00905 Penicillin binding protein transpeptidase domain FEE38_06910 PF01098 Cell cycle protein FEE38_06915 PF05036 Sporulation related domain FEE38_06915 PF03330 Lytic transglycolase FEE38_06920 PF00768 D-alanyl-D-alanine carboxypeptidase FEE38_06920 PF07943 Penicillin-binding protein 5, C-terminal domain FEE38_06925 PF04359 Protein of unknown function (DUF493) FEE38_06930 PF03099 Biotin/lipoate A/B protein ligase family FEE38_06935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_06935 PF03466 LysR substrate binding domain FEE38_06940 PF04055 Radical SAM superfamily FEE38_06940 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FEE38_06945 PF02416 mttA/Hcf106 family FEE38_06950 PF00795 Carbon-nitrogen hydrolase FEE38_06955 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FEE38_06960 PF00313 'Cold-shock' DNA-binding domain FEE38_06965 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FEE38_06970 PF03606 C4-dicarboxylate anaerobic carrier FEE38_06975 PF00445 Ribonuclease T2 family FEE38_06980 PF14760 Rnk N-terminus FEE38_06980 PF01272 Transcription elongation factor, GreA/GreB, C-term FEE38_06985 PF00582 Universal stress protein family FEE38_06990 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_06990 PF13192 Thioredoxin domain FEE38_06995 PF10417 C-terminal domain of 1-Cys peroxiredoxin FEE38_06995 PF00578 AhpC/TSA family FEE38_07000 PF13098 Thioredoxin-like domain FEE38_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_07005 PF03466 LysR substrate binding domain FEE38_07010 PF01507 Phosphoadenosine phosphosulfate reductase family FEE38_07010 PF11922 Domain of unknown function (DUF3440) FEE38_07015 PF02195 ParB-like nuclease domain FEE38_07020 PF00155 Aminotransferase class I and II FEE38_07030 PF03079 ARD/ARD' family FEE38_07035 PF00384 Molybdopterin oxidoreductase FEE38_07035 PF01568 Molydopterin dinucleotide binding domain FEE38_07045 PF00005 ABC transporter FEE38_07050 PF02653 Branched-chain amino acid transport system / permease component FEE38_07055 PF02653 Branched-chain amino acid transport system / permease component FEE38_07065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_07065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_07070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_07070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_07075 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_07080 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FEE38_07090 PF07969 Amidohydrolase family FEE38_07095 PF00356 Bacterial regulatory proteins, lacI family FEE38_07100 PF00459 Inositol monophosphatase family FEE38_07105 PF07690 Major Facilitator Superfamily FEE38_07110 PF00328 Histidine phosphatase superfamily (branch 2) FEE38_07115 PF01008 Initiation factor 2 subunit family FEE38_07120 PF01636 Phosphotransferase enzyme family FEE38_07140 PF02653 Branched-chain amino acid transport system / permease component FEE38_07145 PF00005 ABC transporter FEE38_07150 PF00465 Iron-containing alcohol dehydrogenase FEE38_07170 PF04328 Selenoprotein, putative FEE38_07175 PF13722 5TM C-terminal transporter carbon starvation CstA FEE38_07175 PF02554 Carbon starvation protein CstA FEE38_07180 PF03061 Thioesterase superfamily FEE38_07190 PF00857 Isochorismatase family FEE38_07190 PF00550 Phosphopantetheine attachment site FEE38_07195 PF00501 AMP-binding enzyme FEE38_07195 PF13193 AMP-binding enzyme C-terminal domain FEE38_07200 PF00425 chorismate binding enzyme FEE38_07205 PF01497 Periplasmic binding protein FEE38_07210 PF05977 Transmembrane secretion effector FEE38_07215 PF01032 FecCD transport family FEE38_07220 PF01032 FecCD transport family FEE38_07225 PF00005 ABC transporter FEE38_07230 PF13193 AMP-binding enzyme C-terminal domain FEE38_07230 PF00501 AMP-binding enzyme FEE38_07230 PF00550 Phosphopantetheine attachment site FEE38_07230 PF00975 Thioesterase domain FEE38_07230 PF00668 Condensation domain FEE38_07235 PF03621 MbtH-like protein FEE38_07240 PF11806 Domain of unknown function (DUF3327) FEE38_07240 PF00756 Putative esterase FEE38_07245 PF07715 TonB-dependent Receptor Plug Domain FEE38_07245 PF00593 TonB dependent receptor FEE38_07250 PF01648 4'-phosphopantetheinyl transferase superfamily FEE38_07250 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FEE38_07255 PF02780 Transketolase, C-terminal domain FEE38_07255 PF02779 Transketolase, pyrimidine binding domain FEE38_07260 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_07265 PF00325 Bacterial regulatory proteins, crp family FEE38_07265 PF04198 Putative sugar-binding domain FEE38_07270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_07270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_07275 PF13407 Periplasmic binding protein domain FEE38_07285 PF00005 ABC transporter FEE38_07290 PF02653 Branched-chain amino acid transport system / permease component FEE38_07310 PF03466 LysR substrate binding domain FEE38_07310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_07315 PF00924 Mechanosensitive ion channel FEE38_07325 PF02028 BCCT, betaine/carnitine/choline family transporter FEE38_07330 PF13977 BetI-type transcriptional repressor, C-terminal FEE38_07330 PF00440 Bacterial regulatory proteins, tetR family FEE38_07335 PF00171 Aldehyde dehydrogenase family FEE38_07340 PF00732 GMC oxidoreductase FEE38_07340 PF05199 GMC oxidoreductase FEE38_07350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_07355 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_07365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_07365 PF00005 ABC transporter FEE38_07370 PF00005 ABC transporter FEE38_07370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_07380 PF00202 Aminotransferase class-III FEE38_07385 PF00106 short chain dehydrogenase FEE38_07390 PF00005 ABC transporter FEE38_07395 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_07400 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_07405 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_07405 PF01464 Transglycosylase SLT domain FEE38_07410 PF00155 Aminotransferase class I and II FEE38_07410 PF00392 Bacterial regulatory proteins, gntR family FEE38_07415 PF00155 Aminotransferase class I and II FEE38_07420 PF00892 EamA-like transporter family FEE38_07425 PF07687 Peptidase dimerisation domain FEE38_07425 PF01546 Peptidase family M20/M25/M40 FEE38_07430 PF00005 ABC transporter FEE38_07430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_07435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_07435 PF00005 ABC transporter FEE38_07440 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_07440 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_07445 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_07450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_07455 PF04107 Glutamate-cysteine ligase family 2(GCS2) FEE38_07460 PF09992 Phosphodiester glycosidase FEE38_07465 PF00873 AcrB/AcrD/AcrF family FEE38_07470 PF13533 Biotin-lipoyl like FEE38_07475 PF00690 Cation transporter/ATPase, N-terminus FEE38_07475 PF00689 Cation transporting ATPase, C-terminus FEE38_07485 PF06643 Protein of unknown function (DUF1158) FEE38_07490 PF12833 Helix-turn-helix domain FEE38_07495 PF12706 Beta-lactamase superfamily domain FEE38_07500 PF00440 Bacterial regulatory proteins, tetR family FEE38_07505 PF04237 YjbR FEE38_07510 PF00881 Nitroreductase family FEE38_07535 PF07690 Major Facilitator Superfamily FEE38_07540 PF00924 Mechanosensitive ion channel FEE38_07555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_07555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_07565 PF03825 Nucleoside H+ symporter FEE38_07570 PF00324 Amino acid permease FEE38_07575 PF07715 TonB-dependent Receptor Plug Domain FEE38_07575 PF00593 TonB dependent receptor FEE38_07585 PF00171 Aldehyde dehydrogenase family FEE38_07590 PF01266 FAD dependent oxidoreductase FEE38_07600 PF13520 Amino acid permease FEE38_07610 PF00850 Histone deacetylase domain FEE38_07620 PF00196 Bacterial regulatory proteins, luxR family FEE38_07625 PF04055 Radical SAM superfamily FEE38_07630 PF00884 Sulfatase FEE38_07640 PF10703 MoaF N-terminal domain FEE38_07640 PF17409 MoaF C-terminal domain FEE38_07645 PF00248 Aldo/keto reductase family FEE38_07650 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_07655 PF07687 Peptidase dimerisation domain FEE38_07655 PF01546 Peptidase family M20/M25/M40 FEE38_07675 PF01032 FecCD transport family FEE38_07680 PF00005 ABC transporter FEE38_07685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_07685 PF00529 HlyD membrane-fusion protein of T1SS FEE38_07690 PF11742 Protein of unknown function (DUF3302) FEE38_07700 PF00294 pfkB family carbohydrate kinase FEE38_07705 PF11471 Maltoporin periplasmic N-terminal extension FEE38_07705 PF02264 LamB porin FEE38_07710 PF00367 phosphotransferase system, EIIB FEE38_07710 PF02378 Phosphotransferase system, EIIC FEE38_07715 PF08244 Glycosyl hydrolases family 32 C terminal FEE38_07715 PF00251 Glycosyl hydrolases family 32 N-terminal domain FEE38_07720 PF00356 Bacterial regulatory proteins, lacI family FEE38_07720 PF13407 Periplasmic binding protein domain FEE38_07730 PF02653 Branched-chain amino acid transport system / permease component FEE38_07735 PF00005 ABC transporter FEE38_07740 PF13407 Periplasmic binding protein domain FEE38_07745 PF00356 Bacterial regulatory proteins, lacI family FEE38_07750 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_07750 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_07755 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_07755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_07760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_07760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_07765 PF01261 Xylose isomerase-like TIM barrel FEE38_07775 PF01336 OB-fold nucleic acid binding domain FEE38_07775 PF00152 tRNA synthetases class II (D, K and N) FEE38_07780 PF00854 POT family FEE38_07785 PF01276 Orn/Lys/Arg decarboxylase, major domain FEE38_07785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FEE38_07785 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FEE38_07790 PF13520 Amino acid permease FEE38_07795 PF18500 CadC C-terminal domain 1 FEE38_07795 PF00486 Transcriptional regulatory protein, C terminal FEE38_07810 PF03279 Bacterial lipid A biosynthesis acyltransferase FEE38_07825 PF00577 Outer membrane usher protein FEE38_07825 PF13954 PapC N-terminal domain FEE38_07825 PF13953 PapC C-terminal domain FEE38_07830 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_07830 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_07835 PF16970 Type-1 fimbrial protein, A FEE38_07850 PF00285 Citrate synthase, C-terminal domain FEE38_07860 PF00576 HIUase/Transthyretin family FEE38_07870 PF00717 Peptidase S24-like FEE38_07905 PF06791 Prophage tail length tape measure protein FEE38_07990 PF03592 Terminase small subunit FEE38_07990 PF10668 Phage terminase small subunit FEE38_08055 PF00149 Calcineurin-like phosphoesterase FEE38_08080 PF13392 HNH endonuclease FEE38_08135 PF01381 Helix-turn-helix FEE38_08135 PF00717 Peptidase S24-like FEE38_08225 PF00589 Phage integrase family FEE38_08240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FEE38_08240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FEE38_08250 PF01406 tRNA synthetases class I (C) catalytic domain FEE38_08250 PF09190 DALR domain FEE38_08255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FEE38_08260 PF00149 Calcineurin-like phosphoesterase FEE38_08270 PF00731 AIR carboxylase FEE38_08275 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FEE38_08275 PF02222 ATP-grasp domain FEE38_08300 PF13472 GDSL-like Lipase/Acylhydrolase family FEE38_08305 PF00106 short chain dehydrogenase FEE38_08310 PF00085 Thioredoxin FEE38_08320 PF03649 Uncharacterised protein family (UPF0014) FEE38_08325 PF00005 ABC transporter FEE38_08330 PF16200 C-terminal region of band_7 FEE38_08330 PF01145 SPFH domain / Band 7 family FEE38_08335 PF01957 NfeD-like C-terminal, partner-binding FEE38_08340 PF13411 MerR HTH family regulatory protein FEE38_08345 PF00403 Heavy-metal-associated domain FEE38_08350 PF01963 TraB family FEE38_08355 PF04073 Aminoacyl-tRNA editing domain FEE38_08360 PF02872 5'-nucleotidase, C-terminal domain FEE38_08360 PF00149 Calcineurin-like phosphoesterase FEE38_08365 PF07690 Major Facilitator Superfamily FEE38_08370 PF02254 TrkA-N domain FEE38_08370 PF00999 Sodium/hydrogen exchanger family FEE38_08375 PF00294 pfkB family carbohydrate kinase FEE38_08380 PF00762 Ferrochelatase FEE38_08385 PF05191 Adenylate kinase, active site lid FEE38_08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_08390 PF00183 Hsp90 protein FEE38_08395 PF02132 RecR protein FEE38_08395 PF13662 Toprim domain FEE38_08400 PF02575 YbaB/EbfC DNA-binding family FEE38_08405 PF12170 DNA polymerase III tau subunit V interacting with alpha FEE38_08405 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FEE38_08405 PF12169 DNA polymerase III subunits gamma and tau domain III FEE38_08410 PF00156 Phosphoribosyl transferase domain FEE38_08415 PF04304 Protein of unknown function (DUF454) FEE38_08420 PF07445 Primosomal replication protein priC FEE38_08425 PF10689 Protein of unknown function (DUF2496) FEE38_08430 PF04754 Putative transposase, YhgA-like FEE38_08435 PF00924 Mechanosensitive ion channel FEE38_08435 PF12794 Mechanosensitive ion channel inner membrane domain 1 FEE38_08435 PF12795 Mechanosensitive ion channel porin domain FEE38_08440 PF00440 Bacterial regulatory proteins, tetR family FEE38_08440 PF08361 MAATS-type transcriptional repressor, C-terminal region FEE38_08445 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_08445 PF00529 HlyD membrane-fusion protein of T1SS FEE38_08450 PF00873 AcrB/AcrD/AcrF family FEE38_08455 PF10757 Biofilm formation regulator YbaJ FEE38_08460 PF05321 Haemolysin expression modulating protein FEE38_08465 PF14602 Hexapeptide repeat of succinyl-transferase FEE38_08465 PF12464 Maltose acetyltransferase FEE38_08470 PF10777 Inner membrane protein YlaC FEE38_08475 PF00392 Bacterial regulatory proteins, gntR family FEE38_08475 PF00155 Aminotransferase class I and II FEE38_08485 PF00444 Ribosomal protein L36 FEE38_08490 PF01197 Ribosomal protein L31 FEE38_08495 PF00356 Bacterial regulatory proteins, lacI family FEE38_08500 PF02264 LamB porin FEE38_08505 PF00367 phosphotransferase system, EIIB FEE38_08505 PF02378 Phosphotransferase system, EIIC FEE38_08510 PF08532 Beta-galactosidase trimerisation domain FEE38_08510 PF08533 Beta-galactosidase C-terminal domain FEE38_08510 PF02449 Beta-galactosidase FEE38_08515 PF07745 Glycosyl hydrolase family 53 FEE38_08520 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_08525 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_08530 PF13416 Bacterial extracellular solute-binding protein FEE38_08535 PF17912 MalK OB fold domain FEE38_08535 PF00005 ABC transporter FEE38_08540 PF00563 EAL domain FEE38_08540 PF12792 CSS motif domain associated with EAL FEE38_08545 PF02583 Metal-sensitive transcriptional repressor FEE38_08550 PF03824 High-affinity nickel-transport protein FEE38_08585 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FEE38_08590 PF09619 Type III secretion system lipoprotein chaperone (YscW) FEE38_08600 PF00909 Ammonium Transporter Family FEE38_08605 PF00543 Nitrogen regulatory protein P-II FEE38_08610 PF00005 ABC transporter FEE38_08610 PF00664 ABC transporter transmembrane region FEE38_08615 PF00664 ABC transporter transmembrane region FEE38_08615 PF00005 ABC transporter FEE38_08620 PF13404 AsnC-type helix-turn-helix domain FEE38_08620 PF01037 Lrp/AsnC ligand binding domain FEE38_08625 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_08635 PF12793 Sugar transport-related sRNA regulator N-term FEE38_08635 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_08640 PF06508 Queuosine biosynthesis protein QueC FEE38_08655 PF13145 PPIC-type PPIASE domain FEE38_08660 PF00216 Bacterial DNA-binding protein FEE38_08665 PF05362 Lon protease (S16) C-terminal proteolytic domain FEE38_08665 PF02190 ATP-dependent protease La (LON) substrate-binding domain FEE38_08665 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_08670 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_08670 PF07724 AAA domain (Cdc48 subfamily) FEE38_08670 PF06689 ClpX C4-type zinc finger FEE38_08675 PF00574 Clp protease FEE38_08680 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FEE38_08680 PF05698 Bacterial trigger factor protein (TF) C-terminus FEE38_08680 PF05697 Bacterial trigger factor protein (TF) FEE38_08695 PF01722 BolA-like protein FEE38_08700 PF03923 Uncharacterized lipoprotein FEE38_08700 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FEE38_08705 PF07690 Major Facilitator Superfamily FEE38_08710 PF06481 COX Aromatic Rich Motif FEE38_08710 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FEE38_08715 PF00115 Cytochrome C and Quinol oxidase polypeptide I FEE38_08720 PF00510 Cytochrome c oxidase subunit III FEE38_08725 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FEE38_08730 PF01040 UbiA prenyltransferase family FEE38_08740 PF09339 IclR helix-turn-helix domain FEE38_08740 PF01614 Bacterial transcriptional regulator FEE38_08745 PF08501 Shikimate dehydrogenase substrate binding domain FEE38_08745 PF01488 Shikimate / quinate 5-dehydrogenase FEE38_08745 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FEE38_08750 PF00890 FAD binding domain FEE38_08760 PF00890 FAD binding domain FEE38_08770 PF07690 Major Facilitator Superfamily FEE38_08775 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_08775 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_08780 PF07690 Major Facilitator Superfamily FEE38_08785 PF04461 Protein of unknown function (DUF520) FEE38_08790 PF08546 Ketopantoate reductase PanE/ApbA C terminal FEE38_08790 PF02558 Ketopantoate reductase PanE/ApbA FEE38_08795 PF01965 DJ-1/PfpI family FEE38_08805 PF02926 THUMP domain FEE38_08805 PF02568 Thiamine biosynthesis protein (ThiI) FEE38_08810 PF02609 Exonuclease VII small subunit FEE38_08815 PF00348 Polyprenyl synthetase FEE38_08820 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FEE38_08820 PF02779 Transketolase, pyrimidine binding domain FEE38_08820 PF02780 Transketolase, C-terminal domain FEE38_08825 PF00248 Aldo/keto reductase family FEE38_08830 PF04608 Phosphatidylglycerophosphatase A FEE38_08835 PF00586 AIR synthase related protein, N-terminal domain FEE38_08835 PF02769 AIR synthase related protein, C-terminal domain FEE38_08840 PF01029 NusB family FEE38_08845 PF00885 6,7-dimethyl-8-ribityllumazine synthase FEE38_08850 PF01872 RibD C-terminal domain FEE38_08850 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FEE38_08855 PF03477 ATP cone domain FEE38_08860 PF11622 Protein of unknown function (DUF3251) FEE38_08865 PF03502 Nucleoside-specific channel-forming protein, Tsx FEE38_08880 PF02355 Protein export membrane protein FEE38_08880 PF07549 SecD/SecF GG Motif FEE38_08885 PF07549 SecD/SecF GG Motif FEE38_08885 PF13721 SecD export protein N-terminal TM region FEE38_08885 PF02355 Protein export membrane protein FEE38_08890 PF02699 Preprotein translocase subunit FEE38_08895 PF01702 Queuine tRNA-ribosyltransferase FEE38_08900 PF02547 Queuosine biosynthesis protein FEE38_08905 PF04336 Acyl carrier protein phosphodiesterase FEE38_08910 PF00578 AhpC/TSA family FEE38_08910 PF10417 C-terminal domain of 1-Cys peroxiredoxin FEE38_08915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_08925 PF03611 PTS system sugar-specific permease component FEE38_08930 PF00294 pfkB family carbohydrate kinase FEE38_08935 PF01116 Fructose-bisphosphate aldolase class-II FEE38_08940 PF01979 Amidohydrolase family FEE38_08950 PF00857 Isochorismatase family FEE38_08955 PF03466 LysR substrate binding domain FEE38_08955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_08960 PF02903 Alpha amylase, N-terminal ig-like domain FEE38_08960 PF00128 Alpha amylase, catalytic domain FEE38_08965 PF00324 Amino acid permease FEE38_08970 PF05525 Branched-chain amino acid transport protein FEE38_08975 PF11808 Phosphate regulon sensor protein PhoR FEE38_08975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_08975 PF00512 His Kinase A (phospho-acceptor) domain FEE38_08975 PF00989 PAS fold FEE38_08980 PF00486 Transcriptional regulatory protein, C terminal FEE38_08980 PF00072 Response regulator receiver domain FEE38_08985 PF12320 Type 5 capsule protein repressor C-terminal domain FEE38_08985 PF00149 Calcineurin-like phosphoesterase FEE38_08990 PF13476 AAA domain FEE38_08995 PF00480 ROK family FEE38_09000 PF04381 Putative exonuclease, RdgC FEE38_09005 PF06865 Pyrimidine/purine nucleoside phosphorylase FEE38_09010 PF07302 AroM protein FEE38_09015 PF16362 YaiA protein FEE38_09020 PF01202 Shikimate kinase FEE38_09025 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) FEE38_09030 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FEE38_09035 PF03807 NADP oxidoreductase coenzyme F420-dependent FEE38_09035 PF14748 Pyrroline-5-carboxylate reductase dimerisation FEE38_09040 PF07769 psiF repeat FEE38_09045 PF00245 Alkaline phosphatase FEE38_09050 PF10796 Sigma-S stabilisation anti-adaptor protein FEE38_09055 PF07690 Major Facilitator Superfamily FEE38_09065 PF01820 D-ala D-ala ligase N-terminus FEE38_09065 PF07478 D-ala D-ala ligase C-terminus FEE38_09070 PF10953 Protein of unknown function (DUF2754) FEE38_09075 PF10954 Protein of unknown function (DUF2755) FEE38_09080 PF07759 Protein of unknown function (DUF1615) FEE38_09090 PF00857 Isochorismatase family FEE38_09095 PF00144 Beta-lactamase FEE38_09100 PF00490 Delta-aminolevulinic acid dehydratase FEE38_09110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FEE38_09115 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09120 PF00005 ABC transporter FEE38_09125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FEE38_09130 PF02574 Homocysteine S-methyltransferase FEE38_09135 PF00324 Amino acid permease FEE38_09140 PF00324 Amino acid permease FEE38_09145 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FEE38_09150 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FEE38_09155 PF13458 Periplasmic binding protein FEE38_09160 PF02653 Branched-chain amino acid transport system / permease component FEE38_09165 PF11862 Domain of unknown function (DUF3382) FEE38_09165 PF02653 Branched-chain amino acid transport system / permease component FEE38_09170 PF00005 ABC transporter FEE38_09170 PF12399 Branched-chain amino acid ATP-binding cassette transporter FEE38_09175 PF00005 ABC transporter FEE38_09190 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_09195 PF00005 ABC transporter FEE38_09200 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09205 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09220 PF15976 CS1-pili formation C-terminal FEE38_09220 PF16967 E-set like domain FEE38_09225 PF18649 EcpB C-terminal domain FEE38_09230 PF16449 Fimbrillin MatB FEE38_09235 PF00196 Bacterial regulatory proteins, luxR family FEE38_09245 PF00005 ABC transporter FEE38_09255 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09260 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09290 PF00877 NlpC/P60 family FEE38_09295 PF00267 Gram-negative porin FEE38_09300 PF00696 Amino acid kinase family FEE38_09300 PF01472 PUA domain FEE38_09305 PF00171 Aldehyde dehydrogenase family FEE38_09315 PF13356 Arm DNA-binding domain FEE38_09315 PF14659 Phage integrase, N-terminal SAM-like domain FEE38_09315 PF00589 Phage integrase family FEE38_09385 PF13191 AAA ATPase domain FEE38_09385 PF00069 Protein kinase domain FEE38_09390 PF00676 Dehydrogenase E1 component FEE38_09395 PF02780 Transketolase, C-terminal domain FEE38_09395 PF02779 Transketolase, pyrimidine binding domain FEE38_09400 PF00364 Biotin-requiring enzyme FEE38_09400 PF02817 e3 binding domain FEE38_09400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FEE38_09405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FEE38_09405 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_09420 PF01791 DeoC/LacD family aldolase FEE38_09430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_09430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_09440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_09440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_09440 PF01842 ACT domain FEE38_09445 PF03611 PTS system sugar-specific permease component FEE38_09450 PF00043 Glutathione S-transferase, C-terminal domain FEE38_09450 PF13417 Glutathione S-transferase, N-terminal domain FEE38_09455 PF13847 Methyltransferase domain FEE38_09460 PF09857 Putative toxin of bacterial toxin-antitoxin pair FEE38_09465 PF08943 CsiD FEE38_09470 PF01266 FAD dependent oxidoreductase FEE38_09475 PF00171 Aldehyde dehydrogenase family FEE38_09480 PF00202 Aminotransferase class-III FEE38_09485 PF00324 Amino acid permease FEE38_09490 PF00392 Bacterial regulatory proteins, gntR family FEE38_09490 PF07729 FCD domain FEE38_09495 PF07417 Sigma factor-binding transcriptional regulator Crl FEE38_09505 PF00156 Phosphoribosyl transferase domain FEE38_09510 PF07687 Peptidase dimerisation domain FEE38_09510 PF01546 Peptidase family M20/M25/M40 FEE38_09515 PF13673 Acetyltransferase (GNAT) domain FEE38_09520 PF11798 IMS family HHH motif FEE38_09520 PF11799 impB/mucB/samB family C-terminal domain FEE38_09520 PF00817 impB/mucB/samB family FEE38_09525 PF03009 Glycerophosphoryl diester phosphodiesterase family FEE38_09530 PF04400 (Na+)-NQR maturation NqrM FEE38_09535 PF00970 Oxidoreductase FAD-binding domain FEE38_09535 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_09535 PF00175 Oxidoreductase NAD-binding domain FEE38_09540 PF02508 Rnf-Nqr subunit, membrane protein FEE38_09545 PF02508 Rnf-Nqr subunit, membrane protein FEE38_09550 PF04205 FMN-binding domain FEE38_09555 PF03116 NQR2, RnfD, RnfE family FEE38_09560 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FEE38_09560 PF11973 NQRA C-terminal domain FEE38_09565 PF03734 L,D-transpeptidase catalytic domain FEE38_09570 PF13230 Glutamine amidotransferases class-II FEE38_09575 PF13580 SIS domain FEE38_09580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FEE38_09580 PF09317 Domain of unknown function (DUF1974) FEE38_09580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FEE38_09580 PF02770 Acyl-CoA dehydrogenase, middle domain FEE38_09585 PF00795 Carbon-nitrogen hydrolase FEE38_09590 PF01810 LysE type translocator FEE38_09595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_09595 PF03466 LysR substrate binding domain FEE38_09605 PF00929 Exonuclease FEE38_09610 PF00075 RNase H FEE38_09615 PF08241 Methyltransferase domain FEE38_09620 PF00753 Metallo-beta-lactamase superfamily FEE38_09620 PF16123 Hydroxyacylglutathione hydrolase C-terminus FEE38_09625 PF01464 Transglycosylase SLT domain FEE38_09625 PF01476 LysM domain FEE38_09630 PF08241 Methyltransferase domain FEE38_09635 PF03372 Endonuclease/Exonuclease/phosphatase family FEE38_09640 PF07690 Major Facilitator Superfamily FEE38_09645 PF03466 LysR substrate binding domain FEE38_09645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_09650 PF00248 Aldo/keto reductase family FEE38_09690 PF09383 NIL domain FEE38_09690 PF00005 ABC transporter FEE38_09695 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_09700 PF03180 NLPA lipoprotein FEE38_09705 PF16358 RcsF lipoprotein FEE38_09710 PF01980 tRNA-methyltransferase O FEE38_09710 PF18389 TrmO C-terminal domain FEE38_09715 PF03129 Anticodon binding domain FEE38_09715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FEE38_09715 PF04073 Aminoacyl-tRNA editing domain FEE38_09720 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family FEE38_09725 PF17185 NlpE C-terminal OB domain FEE38_09725 PF04170 NlpE N-terminal domain FEE38_09730 PF00472 RF-1 domain FEE38_09735 PF07152 YaeQ protein FEE38_09740 PF06786 Uncharacterised protein family (UPF0253) FEE38_09745 PF07073 Modulator of Rho-dependent transcription termination (ROF) FEE38_09750 PF11734 TilS substrate C-terminal domain FEE38_09750 PF01171 PP-loop family FEE38_09750 PF09179 TilS substrate binding domain FEE38_09755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FEE38_09765 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FEE38_09770 PF02811 PHP domain FEE38_09770 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FEE38_09770 PF14579 Helix-hairpin-helix motif FEE38_09770 PF07733 Bacterial DNA polymerase III alpha NTPase domain FEE38_09770 PF01336 OB-fold nucleic acid binding domain FEE38_09775 PF01351 Ribonuclease HII FEE38_09780 PF02684 Lipid-A-disaccharide synthetase FEE38_09785 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_09785 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FEE38_09790 PF07977 FabA-like domain FEE38_09795 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FEE38_09795 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_09800 PF03938 Outer membrane protein (OmpH-like) FEE38_09805 PF07244 Surface antigen variable number repeat FEE38_09805 PF01103 Surface antigen FEE38_09810 PF02163 Peptidase family M50 FEE38_09810 PF17820 PDZ domain FEE38_09820 PF01255 Putative undecaprenyl diphosphate synthase FEE38_09830 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FEE38_09830 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FEE38_09830 PF13288 DXP reductoisomerase C-terminal domain FEE38_09835 PF01765 Ribosome recycling factor FEE38_09840 PF00696 Amino acid kinase family FEE38_09845 PF00889 Elongation factor TS FEE38_09850 PF00318 Ribosomal protein S2 FEE38_09855 PF00557 Metallopeptidase family M24 FEE38_09860 PF08335 GlnD PII-uridylyltransferase FEE38_09860 PF01966 HD domain FEE38_09860 PF01909 Nucleotidyltransferase domain FEE38_09860 PF01842 ACT domain FEE38_09865 PF14602 Hexapeptide repeat of succinyl-transferase FEE38_09865 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_09865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FEE38_09870 PF11944 Protein of unknown function (DUF3461) FEE38_09875 PF17853 GGDEF-like domain FEE38_09875 PF05651 Putative sugar diacid recognition FEE38_09875 PF13556 PucR C-terminal helix-turn-helix domain FEE38_09880 PF00595 PDZ domain FEE38_09885 PF13286 Phosphohydrolase-associated domain FEE38_09885 PF01966 HD domain FEE38_09890 PF01048 Phosphorylase superfamily FEE38_09895 PF01497 Periplasmic binding protein FEE38_09900 PF03458 UPF0126 domain FEE38_09905 PF01521 Iron-sulphur cluster biosynthesis FEE38_09910 PF00654 Voltage gated chloride channel FEE38_09915 PF00202 Aminotransferase class-III FEE38_09920 PF01032 FecCD transport family FEE38_09925 PF01497 Periplasmic binding protein FEE38_09930 PF00005 ABC transporter FEE38_09935 PF07715 TonB-dependent Receptor Plug Domain FEE38_09935 PF00593 TonB dependent receptor FEE38_09940 PF00912 Transglycosylase FEE38_09940 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FEE38_09940 PF00905 Penicillin binding protein transpeptidase domain FEE38_09940 PF14814 Bifunctional transglycosylase second domain FEE38_09945 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FEE38_09950 PF16537 Type II secretion system protein B FEE38_09955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FEE38_09955 PF18494 Pullulanase Ins domain FEE38_09955 PF11852 Domain of unknown function (DUF3372) FEE38_09955 PF03714 Bacterial pullanase-associated domain FEE38_09955 PF17967 Pullulanase N2 domain FEE38_09960 PF11356 Type II secretion system protein C FEE38_09965 PF03958 Bacterial type II/III secretion system short domain FEE38_09965 PF00263 Bacterial type II and III secretion system protein FEE38_09970 PF00437 Type II/IV secretion system protein FEE38_09975 PF00482 Type II secretion system (T2SS), protein F FEE38_09980 PF08334 Type II secretion system (T2SS), protein G FEE38_09980 PF07963 Prokaryotic N-terminal methylation motif FEE38_09985 PF07963 Prokaryotic N-terminal methylation motif FEE38_09990 PF02501 Type II secretion system (T2SS), protein I FEE38_09990 PF07963 Prokaryotic N-terminal methylation motif FEE38_09995 PF07963 Prokaryotic N-terminal methylation motif FEE38_09995 PF11612 Type II secretion system (T2SS), protein J FEE38_10000 PF03934 Type II secretion system (T2SS), protein K FEE38_10005 PF12693 GspL periplasmic domain FEE38_10005 PF05134 Type II secretion system (T2SS), protein L FEE38_10010 PF04612 Type II secretion system (T2SS), protein M FEE38_10015 PF01203 Type II secretion system (T2SS), protein N FEE38_10020 PF06750 Bacterial Peptidase A24 N-terminal domain FEE38_10020 PF01478 Type IV leader peptidase family FEE38_10025 PF04408 Helicase associated domain (HA2) FEE38_10025 PF00271 Helicase conserved C-terminal domain FEE38_10025 PF08482 ATP-dependent helicase C-terminal FEE38_10025 PF00270 DEAD/DEAH box helicase FEE38_10030 PF02834 LigT like Phosphoesterase FEE38_10035 PF17746 SfsA N-terminal OB domain FEE38_10035 PF03749 Sugar fermentation stimulation protein RE domain FEE38_10040 PF01258 Prokaryotic dksA/traR C4-type zinc finger FEE38_10045 PF00749 tRNA synthetases class I (E and Q), catalytic domain FEE38_10050 PF01743 Poly A polymerase head domain FEE38_10050 PF12626 Polymerase A arginine-rich C-terminus FEE38_10050 PF12627 Probable RNA and SrmB- binding site of polymerase A FEE38_10055 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FEE38_10060 PF02548 Ketopantoate hydroxymethyltransferase FEE38_10065 PF02569 Pantoate-beta-alanine ligase FEE38_10070 PF02261 Aspartate decarboxylase FEE38_10075 PF01522 Polysaccharide deacetylase FEE38_10080 PF03610 PTS system fructose IIA component FEE38_10085 PF01061 ABC-2 type transporter FEE38_10090 PF00005 ABC transporter FEE38_10095 PF00484 Carbonic anhydrase FEE38_10100 PF00156 Phosphoribosyl transferase domain FEE38_10105 PF01011 PQQ enzyme repeat FEE38_10110 PF07732 Multicopper oxidase FEE38_10110 PF07731 Multicopper oxidase FEE38_10110 PF00394 Multicopper oxidase FEE38_10115 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FEE38_10130 PF17284 Spermidine synthase tetramerisation domain FEE38_10135 PF02675 S-adenosylmethionine decarboxylase FEE38_10140 PF06062 Uncharacterised protein family (UPF0231) FEE38_10145 PF00330 Aconitase family (aconitate hydratase) FEE38_10145 PF11791 Aconitate B N-terminal domain FEE38_10145 PF06434 Aconitate hydratase 2 N-terminus FEE38_10155 PF11737 Protein of unknown function (DUF3300) FEE38_10170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FEE38_10170 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_10175 PF02817 e3 binding domain FEE38_10175 PF00364 Biotin-requiring enzyme FEE38_10175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FEE38_10180 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_10180 PF17831 Pyruvate dehydrogenase E1 component middle domain FEE38_10185 PF00392 Bacterial regulatory proteins, gntR family FEE38_10185 PF07729 FCD domain FEE38_10190 PF00324 Amino acid permease FEE38_10200 PF04616 Glycosyl hydrolases family 43 FEE38_10200 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain FEE38_10205 PF17113 Regulatory signalling modulator protein AmpE FEE38_10210 PF01510 N-acetylmuramoyl-L-alanine amidase FEE38_10215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FEE38_10215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FEE38_10220 PF07963 Prokaryotic N-terminal methylation motif FEE38_10225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FEE38_10225 PF00437 Type II/IV secretion system protein FEE38_10230 PF00482 Type II secretion system (T2SS), protein F FEE38_10235 PF00478 IMP dehydrogenase / GMP reductase domain FEE38_10240 PF01121 Dephospho-CoA kinase FEE38_10245 PF07072 Cell division protein FEE38_10250 PF03884 DNA gyrase inhibitor YacG FEE38_10255 PF00293 NUDIX domain FEE38_10260 PF02810 SEC-C motif FEE38_10260 PF07517 SecA DEAD-like domain FEE38_10260 PF01043 SecA preprotein cross-linking domain FEE38_10260 PF07516 SecA Wing and Scaffold domain FEE38_10265 PF06558 Secretion monitor precursor protein (SecM) FEE38_10270 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FEE38_10275 PF12327 FtsZ family, C-terminal domain FEE38_10275 PF00091 Tubulin/FtsZ family, GTPase domain FEE38_10280 PF02491 SHS2 domain inserted in FTSA FEE38_10285 PF03799 Cell division protein FtsQ FEE38_10285 PF08478 POTRA domain, FtsQ-type FEE38_10290 PF01820 D-ala D-ala ligase N-terminus FEE38_10290 PF07478 D-ala D-ala ligase C-terminus FEE38_10295 PF08245 Mur ligase middle domain FEE38_10295 PF02875 Mur ligase family, glutamate ligase domain FEE38_10295 PF01225 Mur ligase family, catalytic domain FEE38_10300 PF03033 Glycosyltransferase family 28 N-terminal domain FEE38_10300 PF04101 Glycosyltransferase family 28 C-terminal domain FEE38_10305 PF01098 Cell cycle protein FEE38_10310 PF02875 Mur ligase family, glutamate ligase domain FEE38_10310 PF08245 Mur ligase middle domain FEE38_10315 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FEE38_10315 PF00953 Glycosyl transferase family 4 FEE38_10320 PF08245 Mur ligase middle domain FEE38_10320 PF02875 Mur ligase family, glutamate ligase domain FEE38_10320 PF01225 Mur ligase family, catalytic domain FEE38_10325 PF08245 Mur ligase middle domain FEE38_10325 PF02875 Mur ligase family, glutamate ligase domain FEE38_10325 PF01225 Mur ligase family, catalytic domain FEE38_10330 PF00905 Penicillin binding protein transpeptidase domain FEE38_10330 PF03717 Penicillin-binding Protein dimerisation domain FEE38_10335 PF04999 Cell division protein FtsL FEE38_10340 PF01795 MraW methylase family FEE38_10345 PF02381 MraZ protein, putative antitoxin-like FEE38_10350 PF00356 Bacterial regulatory proteins, lacI family FEE38_10350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_10355 PF10369 Small subunit of acetolactate synthase FEE38_10360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_10360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_10360 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_10370 PF03466 LysR substrate binding domain FEE38_10380 PF08502 LeuA allosteric (dimerisation) domain FEE38_10380 PF00682 HMGL-like FEE38_10385 PF00180 Isocitrate/isopropylmalate dehydrogenase FEE38_10390 PF00330 Aconitase family (aconitate hydratase) FEE38_10395 PF00694 Aconitase C-terminal domain FEE38_10400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FEE38_10400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_10405 PF08501 Shikimate dehydrogenase substrate binding domain FEE38_10405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FEE38_10410 PF07690 Major Facilitator Superfamily FEE38_10415 PF01487 Type I 3-dehydroquinase FEE38_10420 PF03466 LysR substrate binding domain FEE38_10420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_10425 PF07690 Major Facilitator Superfamily FEE38_10430 PF07690 Major Facilitator Superfamily FEE38_10440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_10440 PF12793 Sugar transport-related sRNA regulator N-term FEE38_10450 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_10455 PF00005 ABC transporter FEE38_10460 PF09335 SNARE associated Golgi protein FEE38_10465 PF02311 AraC-like ligand binding domain FEE38_10465 PF12833 Helix-turn-helix domain FEE38_10470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_10475 PF11762 L-arabinose isomerase C-terminal domain FEE38_10475 PF02610 L-arabinose isomerase FEE38_10480 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_10485 PF00136 DNA polymerase family B FEE38_10485 PF03104 DNA polymerase family B, exonuclease domain FEE38_10490 PF00271 Helicase conserved C-terminal domain FEE38_10490 PF12137 RNA polymerase recycling family C-terminal FEE38_10490 PF00176 SNF2 family N-terminal domain FEE38_10490 PF18339 RapA N-terminal Tudor like domain 1 FEE38_10490 PF18337 RapA N-terminal Tudor like domain FEE38_10495 PF00849 RNA pseudouridylate synthase FEE38_10500 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FEE38_10505 PF03390 2-hydroxycarboxylate transporter family FEE38_10510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_10510 PF17203 Single cache domain 3 FEE38_10515 PF00072 Response regulator receiver domain FEE38_10515 PF12431 Transcriptional regulator FEE38_10520 PF05099 Tellurite resistance protein TerB FEE38_10520 PF00226 DnaJ domain FEE38_10525 PF04453 LPS transport system D FEE38_10525 PF03968 OstA-like protein FEE38_10530 PF00639 PPIC-type PPIASE domain FEE38_10530 PF09312 SurA N-terminal domain FEE38_10535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FEE38_10540 PF00398 Ribosomal RNA adenine dimethylase FEE38_10545 PF04379 ApaG domain FEE38_10550 PF00149 Calcineurin-like phosphoesterase FEE38_10555 PF00186 Dihydrofolate reductase FEE38_10560 PF00999 Sodium/hydrogen exchanger family FEE38_10560 PF02254 TrkA-N domain FEE38_10565 PF02525 Flavodoxin-like fold FEE38_10570 PF06004 Bacterial protein of unknown function (DUF903) FEE38_10575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FEE38_10575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FEE38_10575 PF02142 MGS-like domain FEE38_10580 PF00117 Glutamine amidotransferase class-I FEE38_10580 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FEE38_10585 PF01113 Dihydrodipicolinate reductase, N-terminus FEE38_10585 PF05173 Dihydrodipicolinate reductase, C-terminus FEE38_10590 PF02272 DHHA1 domain FEE38_10590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FEE38_10590 PF01411 tRNA synthetases class II (A) FEE38_10595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_10595 PF03466 LysR substrate binding domain FEE38_10605 PF01156 Inosine-uridine preferring nucleoside hydrolase FEE38_10610 PF02401 LytB protein FEE38_10615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FEE38_10620 PF01252 Signal peptidase (SPase) II FEE38_10625 PF08264 Anticodon-binding domain of tRNA FEE38_10625 PF00133 tRNA synthetases class I (I, L, M and V) FEE38_10625 PF06827 Zinc finger found in FPG and IleRS FEE38_10630 PF06574 FAD synthetase FEE38_10630 PF01687 Riboflavin kinase FEE38_10640 PF01649 Ribosomal protein S20 FEE38_10645 PF03466 LysR substrate binding domain FEE38_10645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_10650 PF06965 Na+/H+ antiporter 1 FEE38_10655 PF00684 DnaJ central domain FEE38_10655 PF01556 DnaJ C terminal domain FEE38_10655 PF00226 DnaJ domain FEE38_10660 PF00012 Hsp70 protein FEE38_10665 PF10807 Protein of unknown function (DUF2541) FEE38_10670 PF13099 Domain of unknown function (DUF3944) FEE38_10670 PF03981 Ubiquinol-cytochrome C chaperone FEE38_10675 PF01184 GPR1/FUN34/yaaH family FEE38_10680 PF07690 Major Facilitator Superfamily FEE38_10685 PF00994 Probable molybdopterin binding domain FEE38_10690 PF00923 Transaldolase/Fructose-6-phosphate aldolase FEE38_10700 PF03883 Peroxide stress protein YaaA FEE38_10710 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_10710 PF14821 Threonine synthase N terminus FEE38_10715 PF00288 GHMP kinases N terminal domain FEE38_10715 PF08544 GHMP kinases C terminal FEE38_10720 PF03447 Homoserine dehydrogenase, NAD binding domain FEE38_10720 PF00742 Homoserine dehydrogenase FEE38_10720 PF00696 Amino acid kinase family FEE38_10720 PF01842 ACT domain FEE38_10720 PF13840 ACT domain FEE38_10725 PF08254 Threonine leader peptide FEE38_10730 PF00588 SpoU rRNA Methylase family FEE38_10740 PF00486 Transcriptional regulatory protein, C terminal FEE38_10740 PF00072 Response regulator receiver domain FEE38_10745 PF06123 Inner membrane protein CreD FEE38_10750 PF00672 HAMP domain FEE38_10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_10750 PF00512 His Kinase A (phospho-acceptor) domain FEE38_10755 PF00486 Transcriptional regulatory protein, C terminal FEE38_10755 PF00072 Response regulator receiver domain FEE38_10760 PF05981 CreA protein FEE38_10765 PF12833 Helix-turn-helix domain FEE38_10765 PF06445 GyrI-like small molecule binding domain FEE38_10770 PF00300 Histidine phosphatase superfamily (branch 1) FEE38_10775 PF01931 Protein of unknown function DUF84 FEE38_10780 PF01371 Trp repressor protein FEE38_10785 PF14718 Soluble lytic murein transglycosylase L domain FEE38_10785 PF01464 Transglycosylase SLT domain FEE38_10790 PF00005 ABC transporter FEE38_10790 PF12848 ABC transporter FEE38_10795 PF13521 AAA domain FEE38_10795 PF01381 Helix-turn-helix FEE38_10800 PF18073 Rubredoxin metal binding domain FEE38_10805 PF18429 Domain of unknown function (DUF5609) FEE38_10810 PF10144 Bacterial virulence factor haemolysin FEE38_10815 PF10437 Bacterial lipoate protein ligase C-terminus FEE38_10815 PF03099 Biotin/lipoate A/B protein ligase family FEE38_10820 PF01048 Phosphorylase superfamily FEE38_10825 PF01676 Metalloenzyme superfamily FEE38_10830 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FEE38_10830 PF00591 Glycosyl transferase family, a/b domain FEE38_10830 PF02885 Glycosyl transferase family, helical bundle domain FEE38_10835 PF01791 DeoC/LacD family aldolase FEE38_10840 PF01773 Na+ dependent nucleoside transporter N-terminus FEE38_10840 PF07662 Na+ dependent nucleoside transporter C-terminus FEE38_10840 PF07670 Nucleoside recognition FEE38_10845 PF01026 TatD related DNase FEE38_10850 PF01734 Patatin-like phospholipase FEE38_10855 PF07043 Protein of unknown function (DUF1328) FEE38_10860 PF04972 BON domain FEE38_10865 PF00009 Elongation factor Tu GTP binding domain FEE38_10865 PF03144 Elongation factor Tu domain 2 FEE38_10865 PF16658 Class II release factor RF3, C-terminal domain FEE38_10870 PF13419 Haloacid dehalogenase-like hydrolase FEE38_10875 PF00583 Acetyltransferase (GNAT) family FEE38_10880 PF03603 DNA polymerase III psi subunit FEE38_10885 PF05175 Methyltransferase small domain FEE38_10885 PF08468 Methyltransferase small domain N-terminal FEE38_10905 PF07256 Protein of unknown function (DUF1435) FEE38_10910 PF00990 Diguanylate cyclase, GGDEF domain FEE38_10915 PF06276 Ferric iron reductase FhuF-like transporter FEE38_10915 PF11575 FhuF 2Fe-2S C-terminal domain FEE38_10920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_10920 PF02378 Phosphotransferase system, EIIC FEE38_10925 PF04073 Aminoacyl-tRNA editing domain FEE38_10930 PF00196 Bacterial regulatory proteins, luxR family FEE38_10935 PF00196 Bacterial regulatory proteins, luxR family FEE38_10945 PF01494 FAD binding domain FEE38_10950 PF06738 Putative threonine/serine exporter FEE38_10955 PF12821 Threonine/Serine exporter, ThrE FEE38_10960 PF17948 DnaT DNA-binding domain FEE38_10965 PF01695 IstB-like ATP binding protein FEE38_10970 PF10696 Protein of unknown function (DUF2501) FEE38_10975 PF00884 Sulfatase FEE38_10980 PF04754 Putative transposase, YhgA-like FEE38_10985 PF01380 SIS domain FEE38_10990 PF01380 SIS domain FEE38_10995 PF03613 PTS system mannose/fructose/sorbose family IID component FEE38_11000 PF03609 PTS system sorbose-specific iic component FEE38_11005 PF03830 PTS system sorbose subfamily IIB component FEE38_11010 PF03830 PTS system sorbose subfamily IIB component FEE38_11010 PF03610 PTS system fructose IIA component FEE38_11020 PF00814 Glycoprotease family FEE38_11020 PF00583 Acetyltransferase (GNAT) family FEE38_11025 PF00583 Acetyltransferase (GNAT) family FEE38_11030 PF01418 Helix-turn-helix domain, rpiR family FEE38_11030 PF01380 SIS domain FEE38_11035 PF01081 KDPG and KHG aldolase FEE38_11040 PF05035 2-keto-3-deoxy-galactonokinase FEE38_11045 PF00474 Sodium:solute symporter family FEE38_11055 PF07969 Amidohydrolase family FEE38_11070 PF02615 Malate/L-lactate dehydrogenase FEE38_11085 PF01047 MarR family FEE38_11090 PF01557 Fumarylacetoacetate (FAA) hydrolase family FEE38_11095 PF01557 Fumarylacetoacetate (FAA) hydrolase family FEE38_11100 PF00171 Aldehyde dehydrogenase family FEE38_11105 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FEE38_11110 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase FEE38_11115 PF01557 Fumarylacetoacetate (FAA) hydrolase family FEE38_11120 PF03328 HpcH/HpaI aldolase/citrate lyase family FEE38_11125 PF07690 Major Facilitator Superfamily FEE38_11130 PF12833 Helix-turn-helix domain FEE38_11135 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FEE38_11135 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FEE38_11140 PF01613 Flavin reductase like domain FEE38_11155 PF13722 5TM C-terminal transporter carbon starvation CstA FEE38_11155 PF02554 Carbon starvation protein CstA FEE38_11160 PF04328 Selenoprotein, putative FEE38_11165 PF07683 Cobalamin synthesis protein cobW C-terminal domain FEE38_11165 PF02492 CobW/HypB/UreG, nucleotide-binding domain FEE38_11175 PF00171 Aldehyde dehydrogenase family FEE38_11180 PF04754 Putative transposase, YhgA-like FEE38_11185 PF02311 AraC-like ligand binding domain FEE38_11185 PF12833 Helix-turn-helix domain FEE38_11195 PF04286 Protein of unknown function (DUF445) FEE38_11200 PF07690 Major Facilitator Superfamily FEE38_11210 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FEE38_11215 PF01869 BadF/BadG/BcrA/BcrD ATPase family FEE38_11220 PF11823 Protein of unknown function (DUF3343) FEE38_11230 PF00529 HlyD membrane-fusion protein of T1SS FEE38_11230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_11240 PF06568 Domain of unknown function (DUF1127) FEE38_11245 PF00155 Aminotransferase class I and II FEE38_11245 PF00392 Bacterial regulatory proteins, gntR family FEE38_11250 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FEE38_11255 PF03466 LysR substrate binding domain FEE38_11255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_11260 PF02525 Flavodoxin-like fold FEE38_11265 PF02653 Branched-chain amino acid transport system / permease component FEE38_11270 PF02653 Branched-chain amino acid transport system / permease component FEE38_11280 PF00005 ABC transporter FEE38_11285 PF13407 Periplasmic binding protein domain FEE38_11290 PF00579 tRNA synthetases class I (W and Y) FEE38_11295 PF13533 Biotin-lipoyl like FEE38_11300 PF00005 ABC transporter FEE38_11335 PF08007 Cupin superfamily protein FEE38_11350 PF00512 His Kinase A (phospho-acceptor) domain FEE38_11350 PF00672 HAMP domain FEE38_11350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_11355 PF00072 Response regulator receiver domain FEE38_11355 PF00486 Transcriptional regulatory protein, C terminal FEE38_11360 PF02321 Outer membrane efflux protein FEE38_11365 PF11604 Copper binding periplasmic protein CusF FEE38_11370 PF00529 HlyD membrane-fusion protein of T1SS FEE38_11370 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_11375 PF00873 AcrB/AcrD/AcrF family FEE38_11385 PF08212 Lipocalin-like domain FEE38_11390 PF13411 MerR HTH family regulatory protein FEE38_11400 PF00106 short chain dehydrogenase FEE38_11435 PF08349 Protein of unknown function (DUF1722) FEE38_11440 PF02264 LamB porin FEE38_11455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FEE38_11455 PF04616 Glycosyl hydrolases family 43 FEE38_11475 PF00535 Glycosyl transferase family 2 FEE38_11640 PF02384 N-6 DNA Methylase FEE38_11650 PF18766 SWI2/SNF2 ATPase FEE38_11650 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FEE38_11650 PF11867 Domain of unknown function (DUF3387) FEE38_11715 PF13737 Transposase DDE domain FEE38_11720 PF13356 Arm DNA-binding domain FEE38_11720 PF00589 Phage integrase family FEE38_11730 PF00484 Carbonic anhydrase FEE38_11735 PF00916 Sulfate permease family FEE38_11735 PF01740 STAS domain FEE38_11740 PF00107 Zinc-binding dehydrogenase FEE38_11740 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_11745 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_11750 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_11755 PF00149 Calcineurin-like phosphoesterase FEE38_11760 PF00005 ABC transporter FEE38_11760 PF17912 MalK OB fold domain FEE38_11765 PF13416 Bacterial extracellular solute-binding protein FEE38_11770 PF01261 Xylose isomerase-like TIM barrel FEE38_11775 PF01261 Xylose isomerase-like TIM barrel FEE38_11780 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_11780 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_11785 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_11785 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_11785 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_11790 PF00294 pfkB family carbohydrate kinase FEE38_11795 PF02685 Glucokinase FEE38_11795 PF01418 Helix-turn-helix domain, rpiR family FEE38_11795 PF01380 SIS domain FEE38_11805 PF04962 KduI/IolB family FEE38_11810 PF00171 Aldehyde dehydrogenase family FEE38_11820 PF05872 Bacterial protein of unknown function (DUF853) FEE38_11825 PF03739 Lipopolysaccharide export system permease LptF/LptG FEE38_11830 PF03739 Lipopolysaccharide export system permease LptF/LptG FEE38_11835 PF02789 Cytosol aminopeptidase family, N-terminal domain FEE38_11835 PF00883 Cytosol aminopeptidase family, catalytic domain FEE38_11840 PF04364 DNA polymerase III chi subunit, HolC FEE38_11845 PF08264 Anticodon-binding domain of tRNA FEE38_11845 PF00133 tRNA synthetases class I (I, L, M and V) FEE38_11845 PF10458 Valyl tRNA synthetase tRNA binding arm FEE38_11850 PF00583 Acetyltransferase (GNAT) family FEE38_11855 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FEE38_11860 PF06877 Regulator of ribonuclease activity B FEE38_11865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FEE38_11865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FEE38_11870 PF07702 UTRA domain FEE38_11870 PF00392 Bacterial regulatory proteins, gntR family FEE38_11875 PF03606 C4-dicarboxylate anaerobic carrier FEE38_11880 PF01979 Amidohydrolase family FEE38_11885 PF00294 pfkB family carbohydrate kinase FEE38_11890 PF01380 SIS domain FEE38_11895 PF04074 YhcH/YjgK/YiaL FEE38_11910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FEE38_11910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FEE38_11915 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FEE38_11915 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FEE38_11920 PF01042 Endoribonuclease L-PSP FEE38_11925 PF00689 Cation transporting ATPase, C-terminus FEE38_11925 PF00690 Cation transporter/ATPase, N-terminus FEE38_11930 PF00356 Bacterial regulatory proteins, lacI family FEE38_11935 PF00367 phosphotransferase system, EIIB FEE38_11935 PF02378 Phosphotransferase system, EIIC FEE38_11940 PF00128 Alpha amylase, catalytic domain FEE38_11940 PF11941 Domain of unknown function (DUF3459) FEE38_11945 PF02378 Phosphotransferase system, EIIC FEE38_11950 PF02056 Family 4 glycosyl hydrolase FEE38_11950 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_11955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_11965 PF03477 ATP cone domain FEE38_11965 PF13597 Anaerobic ribonucleoside-triphosphate reductase FEE38_11975 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FEE38_11980 PF04221 RelB antitoxin FEE38_11985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_11985 PF08279 HTH domain FEE38_11985 PF05043 Mga helix-turn-helix domain FEE38_11985 PF00874 PRD domain FEE38_11990 PF10282 Lactonase, 7-bladed beta-propeller FEE38_11995 PF07071 KDGP aldolase FEE38_12000 PF03841 L-seryl-tRNA selenium transferase FEE38_12005 PF01979 Amidohydrolase family FEE38_12035 PF07361 Cytochrome b562 FEE38_12040 PF01523 Putative modulator of DNA gyrase FEE38_12045 PF04751 Protein of unknown function (DUF615) FEE38_12060 PF01225 Mur ligase family, catalytic domain FEE38_12060 PF02875 Mur ligase family, glutamate ligase domain FEE38_12060 PF08245 Mur ligase middle domain FEE38_12065 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FEE38_12070 PF02653 Branched-chain amino acid transport system / permease component FEE38_12075 PF02653 Branched-chain amino acid transport system / permease component FEE38_12080 PF00005 ABC transporter FEE38_12085 PF13407 Periplasmic binding protein domain FEE38_12090 PF00719 Inorganic pyrophosphatase FEE38_12105 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FEE38_12110 PF04357 TamB, inner membrane protein subunit of TAM complex FEE38_12115 PF01103 Surface antigen FEE38_12115 PF07244 Surface antigen variable number repeat FEE38_12115 PF17243 POTRA domain TamA domain 1 FEE38_12120 PF01625 Peptide methionine sulfoxide reductase FEE38_12125 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FEE38_12130 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FEE38_12135 PF00364 Biotin-requiring enzyme FEE38_12135 PF02436 Conserved carboxylase domain FEE38_12135 PF00682 HMGL-like FEE38_12140 PF04277 Oxaloacetate decarboxylase, gamma chain FEE38_12145 PF01566 Natural resistance-associated macrophage protein FEE38_12150 PF00701 Dihydrodipicolinate synthetase family FEE38_12155 PF00356 Bacterial regulatory proteins, lacI family FEE38_12165 PF13737 Transposase DDE domain FEE38_12170 PF06178 Oligogalacturonate-specific porin protein (KdgM) FEE38_12175 PF01595 Cyclin M transmembrane N-terminal domain FEE38_12175 PF00571 CBS domain FEE38_12175 PF03471 Transporter associated domain FEE38_12180 PF01306 LacY proton/sugar symporter FEE38_12185 PF02449 Beta-galactosidase FEE38_12185 PF08533 Beta-galactosidase C-terminal domain FEE38_12185 PF08532 Beta-galactosidase trimerisation domain FEE38_12190 PF02311 AraC-like ligand binding domain FEE38_12190 PF12833 Helix-turn-helix domain FEE38_12195 PF06526 Protein of unknown function (DUF1107) FEE38_12200 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FEE38_12205 PF00459 Inositol monophosphatase family FEE38_12210 PF02872 5'-nucleotidase, C-terminal domain FEE38_12210 PF00149 Calcineurin-like phosphoesterase FEE38_12215 PF01638 HxlR-like helix-turn-helix FEE38_12220 PF05368 NmrA-like family FEE38_12225 PF12833 Helix-turn-helix domain FEE38_12230 PF00892 EamA-like transporter family FEE38_12235 PF04405 Domain of Unknown function (DUF542) FEE38_12235 PF01814 Hemerythrin HHE cation binding domain FEE38_12240 PF00324 Amino acid permease FEE38_12245 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FEE38_12245 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FEE38_12250 PF08525 Opacity-associated protein A N-terminal motif FEE38_12250 PF04225 Opacity-associated protein A LysM-like domain FEE38_12255 PF01281 Ribosomal protein L9, N-terminal domain FEE38_12255 PF03948 Ribosomal protein L9, C-terminal domain FEE38_12260 PF01084 Ribosomal protein S18 FEE38_12265 PF00436 Single-strand binding protein family FEE38_12270 PF01250 Ribosomal protein S6 FEE38_12275 PF07338 Protein of unknown function (DUF1471) FEE38_12280 PF07690 Major Facilitator Superfamily FEE38_12285 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_12290 PF01261 Xylose isomerase-like TIM barrel FEE38_12295 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FEE38_12300 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_12305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_12310 PF03611 PTS system sugar-specific permease component FEE38_12320 PF00455 DeoR C terminal sensor domain FEE38_12320 PF08220 DeoR-like helix-turn-helix domain FEE38_12325 PF00326 Prolyl oligopeptidase family FEE38_12330 PF07338 Protein of unknown function (DUF1471) FEE38_12335 PF07338 Protein of unknown function (DUF1471) FEE38_12340 PF18158 Adaptive response protein AidB N-terminal domain FEE38_12340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FEE38_12340 PF02770 Acyl-CoA dehydrogenase, middle domain FEE38_12345 PF00588 SpoU rRNA Methylase family FEE38_12345 PF08032 RNA 2'-O ribose methyltransferase substrate binding FEE38_12350 PF00575 S1 RNA binding domain FEE38_12350 PF00773 RNB domain FEE38_12350 PF17876 Cold shock domain FEE38_12350 PF08206 Ribonuclease B OB domain FEE38_12350 PF08461 Ribonuclease R winged-helix domain FEE38_12355 PF02082 Transcriptional regulator FEE38_12360 PF00709 Adenylosuccinate synthetase FEE38_12365 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FEE38_12375 PF01145 SPFH domain / Band 7 family FEE38_12380 PF12221 Bacterial membrane protein N terminal FEE38_12380 PF01145 SPFH domain / Band 7 family FEE38_12385 PF13167 GTP-binding GTPase N-terminal FEE38_12385 PF01926 50S ribosome-binding GTPase FEE38_12385 PF16360 GTP-binding GTPase Middle Region FEE38_12390 PF17209 Hfq protein FEE38_12400 PF01119 DNA mismatch repair protein, C-terminal domain FEE38_12400 PF08676 MutL C terminal dimerisation domain FEE38_12405 PF01520 N-acetylmuramoyl-L-alanine amidase FEE38_12410 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FEE38_12415 PF01256 Carbohydrate kinase FEE38_12415 PF03853 YjeF-related protein N-terminus FEE38_12420 PF08331 Domain of unknown function (DUF1730) FEE38_12440 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_12445 PF00929 Exonuclease FEE38_12450 PF03193 RsgA GTPase FEE38_12455 PF02666 Phosphatidylserine decarboxylase FEE38_12460 PF00924 Mechanosensitive ion channel FEE38_12460 PF12795 Mechanosensitive ion channel porin domain FEE38_12460 PF12794 Mechanosensitive ion channel inner membrane domain 1 FEE38_12465 PF13520 Amino acid permease FEE38_12470 PF00152 tRNA synthetases class II (D, K and N) FEE38_12475 PF02910 Fumarate reductase flavoprotein C-term FEE38_12475 PF00890 FAD binding domain FEE38_12480 PF13085 2Fe-2S iron-sulfur cluster binding domain FEE38_12480 PF13183 4Fe-4S dicluster domain FEE38_12485 PF02300 Fumarate reductase subunit C FEE38_12490 PF02313 Fumarate reductase subunit D FEE38_12495 PF08212 Lipocalin-like domain FEE38_12500 PF00893 Small Multidrug Resistance protein FEE38_12505 PF08085 Entericidin EcnA/B family FEE38_12515 PF01132 Elongation factor P (EF-P) OB domain FEE38_12515 PF08207 Elongation factor P (EF-P) KOW-like domain FEE38_12515 PF09285 Elongation factor P, C-terminal FEE38_12520 PF04055 Radical SAM superfamily FEE38_12535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_12535 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_12540 PF00577 Outer membrane usher protein FEE38_12540 PF13954 PapC N-terminal domain FEE38_12540 PF13953 PapC C-terminal domain FEE38_12555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_12555 PF00529 HlyD membrane-fusion protein of T1SS FEE38_12565 PF13737 Transposase DDE domain FEE38_12580 PF13698 Domain of unknown function (DUF4156) FEE38_12585 PF00118 TCP-1/cpn60 chaperonin family FEE38_12590 PF00166 Chaperonin 10 Kd subunit FEE38_12595 PF13520 Amino acid permease FEE38_12600 PF04186 FxsA cytoplasmic membrane protein FEE38_12605 PF00206 Lyase FEE38_12605 PF10415 Fumarase C C-terminus FEE38_12610 PF03605 Anaerobic c4-dicarboxylate membrane transporter FEE38_12615 PF03091 CutA1 divalent ion tolerance protein FEE38_12620 PF02683 Cytochrome C biogenesis protein transmembrane region FEE38_12620 PF11412 Disulphide bond corrector protein DsbC FEE38_12670 PF14883 Hypothetical glycosyl hydrolase family 13 FEE38_12670 PF01522 Polysaccharide deacetylase FEE38_12675 PF00535 Glycosyl transferase family 2 FEE38_12695 PF03741 Integral membrane protein TerC family FEE38_12700 PF01556 DnaJ C terminal domain FEE38_12700 PF00226 DnaJ domain FEE38_12715 PF06406 StbA protein FEE38_12725 PF02056 Family 4 glycosyl hydrolase FEE38_12725 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_12730 PF12833 Helix-turn-helix domain FEE38_12735 PF00083 Sugar (and other) transporter FEE38_12735 PF08946 Osmosensory transporter coiled coil FEE38_12745 PF08274 PhnA Zinc-Ribbon FEE38_12745 PF03831 PhnA domain FEE38_12750 PF06983 3-demethylubiquinone-9 3-methyltransferase FEE38_12755 PF00392 Bacterial regulatory proteins, gntR family FEE38_12755 PF07702 UTRA domain FEE38_12760 PF06754 Phosphonate metabolism protein PhnG FEE38_12765 PF05845 Bacterial phosphonate metabolism protein (PhnH) FEE38_12770 PF05861 Bacterial phosphonate metabolism protein (PhnI) FEE38_12775 PF06007 Phosphonate metabolism protein PhnJ FEE38_12780 PF00005 ABC transporter FEE38_12785 PF00005 ABC transporter FEE38_12790 PF07969 Amidohydrolase family FEE38_12800 PF12706 Beta-lactamase superfamily domain FEE38_12810 PF00072 Response regulator receiver domain FEE38_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_12810 PF13426 PAS domain FEE38_12815 PF00005 ABC transporter FEE38_12820 PF02653 Branched-chain amino acid transport system / permease component FEE38_12825 PF13407 Periplasmic binding protein domain FEE38_12845 PF00072 Response regulator receiver domain FEE38_12845 PF00486 Transcriptional regulatory protein, C terminal FEE38_12855 PF08238 Sel1 repeat FEE38_12860 PF00375 Sodium:dicarboxylate symporter family FEE38_12870 PF00501 AMP-binding enzyme FEE38_12870 PF13193 AMP-binding enzyme C-terminal domain FEE38_12870 PF16177 Acetyl-coenzyme A synthetase N-terminus FEE38_12875 PF04341 Protein of unknown function, DUF485 FEE38_12880 PF00474 Sodium:solute symporter family FEE38_12895 PF13953 PapC C-terminal domain FEE38_12895 PF00577 Outer membrane usher protein FEE38_12895 PF13954 PapC N-terminal domain FEE38_12900 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_12900 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_12905 PF00419 Fimbrial protein FEE38_12910 PF04172 LrgB-like family FEE38_12915 PF03788 LrgA family FEE38_12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_12920 PF03466 LysR substrate binding domain FEE38_12925 PF00999 Sodium/hydrogen exchanger family FEE38_12930 PF00860 Permease family FEE38_12935 PF02798 Glutathione S-transferase, N-terminal domain FEE38_12935 PF00043 Glutathione S-transferase, C-terminal domain FEE38_12940 PF09278 MerR, DNA binding FEE38_12940 PF00376 MerR family regulatory protein FEE38_12945 PF12833 Helix-turn-helix domain FEE38_12950 PF12792 CSS motif domain associated with EAL FEE38_12950 PF00563 EAL domain FEE38_12955 PF15940 Family of unknown function FEE38_12960 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_12975 PF08402 TOBE domain FEE38_12975 PF00005 ABC transporter FEE38_12980 PF12706 Beta-lactamase superfamily domain FEE38_12980 PF00753 Metallo-beta-lactamase superfamily FEE38_12985 PF00356 Bacterial regulatory proteins, lacI family FEE38_12990 PF00459 Inositol monophosphatase family FEE38_13005 PF01103 Surface antigen FEE38_13005 PF07244 Surface antigen variable number repeat FEE38_13015 PF07519 Tannase and feruloyl esterase FEE38_13020 PF12833 Helix-turn-helix domain FEE38_13025 PF00593 TonB dependent receptor FEE38_13025 PF07715 TonB-dependent Receptor Plug Domain FEE38_13030 PF01464 Transglycosylase SLT domain FEE38_13035 PF00436 Single-strand binding protein family FEE38_13040 PF17760 UvrA interaction domain FEE38_13040 PF17755 UvrA DNA-binding domain FEE38_13040 PF00005 ABC transporter FEE38_13045 PF04237 YjbR FEE38_13050 PF01894 Uncharacterised protein family UPF0047 FEE38_13055 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FEE38_13060 PF00155 Aminotransferase class I and II FEE38_13065 PF00842 Alanine racemase, C-terminal domain FEE38_13065 PF01168 Alanine racemase, N-terminal domain FEE38_13070 PF03796 DnaB-like helicase C terminal domain FEE38_13070 PF00772 DnaB-like helicase N terminal domain FEE38_13075 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_13075 PF00107 Zinc-binding dehydrogenase FEE38_13080 PF09583 Phage shock protein G (Phageshock_PspG) FEE38_13085 PF01207 Dihydrouridine synthase (Dus) FEE38_13095 PF01475 Ferric uptake regulator family FEE38_13100 PF05532 CsbD-like FEE38_13105 PF01554 MatE FEE38_13110 PF00717 Peptidase S24-like FEE38_13110 PF01726 LexA DNA binding domain FEE38_13115 PF01219 Prokaryotic diacylglycerol kinase FEE38_13120 PF01553 Acyltransferase FEE38_13125 PF01040 UbiA prenyltransferase family FEE38_13130 PF04345 Chorismate lyase FEE38_13135 PF07148 Maltose operon periplasmic protein precursor (MalM) FEE38_13140 PF02264 LamB porin FEE38_13145 PF00005 ABC transporter FEE38_13145 PF17912 MalK OB fold domain FEE38_13150 PF01547 Bacterial extracellular solute-binding protein FEE38_13155 PF14785 Maltose transport system permease protein MalF P2 domain FEE38_13155 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_13160 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_13165 PF06146 Phosphate-starvation-inducible E FEE38_13170 PF03313 Serine dehydratase alpha chain FEE38_13185 PF01042 Endoribonuclease L-PSP FEE38_13195 PF14602 Hexapeptide repeat of succinyl-transferase FEE38_13195 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_13195 PF12804 MobA-like NTP transferase domain FEE38_13200 PF00342 Phosphoglucose isomerase FEE38_13205 PF00696 Amino acid kinase family FEE38_13205 PF01842 ACT domain FEE38_13210 PF01758 Sodium Bile acid symporter family FEE38_13215 PF11656 YjbD family (DUF3811) FEE38_13220 PF00849 RNA pseudouridylate synthase FEE38_13220 PF01479 S4 domain FEE38_13225 PF04198 Putative sugar-binding domain FEE38_13225 PF13936 Helix-turn-helix domain FEE38_13230 PF00106 short chain dehydrogenase FEE38_13235 PF03610 PTS system fructose IIA component FEE38_13240 PF03830 PTS system sorbose subfamily IIB component FEE38_13245 PF03609 PTS system sorbose-specific iic component FEE38_13250 PF03613 PTS system mannose/fructose/sorbose family IID component FEE38_13255 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_13255 PF00107 Zinc-binding dehydrogenase FEE38_13260 PF08501 Shikimate dehydrogenase substrate binding domain FEE38_13265 PF02690 Na+/Pi-cotransporter FEE38_13270 PF02574 Homocysteine S-methyltransferase FEE38_13270 PF00809 Pterin binding enzyme FEE38_13270 PF02965 Vitamin B12 dependent methionine synthase, activation domain FEE38_13270 PF02607 B12 binding domain FEE38_13270 PF02310 B12 binding domain FEE38_13275 PF01614 Bacterial transcriptional regulator FEE38_13275 PF09339 IclR helix-turn-helix domain FEE38_13280 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FEE38_13285 PF00463 Isocitrate lyase family FEE38_13290 PF01274 Malate synthase FEE38_13295 PF04204 Homoserine O-succinyltransferase FEE38_13300 PF13673 Acetyltransferase (GNAT) domain FEE38_13330 PF02142 MGS-like domain FEE38_13330 PF01808 AICARFT/IMPCHase bienzyme FEE38_13335 PF02843 Phosphoribosylglycinamide synthetase, C domain FEE38_13335 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FEE38_13335 PF02844 Phosphoribosylglycinamide synthetase, N domain FEE38_13340 PF00072 Response regulator receiver domain FEE38_13340 PF02954 Bacterial regulatory protein, Fis family FEE38_13340 PF00158 Sigma-54 interaction domain FEE38_13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_13345 PF00512 His Kinase A (phospho-acceptor) domain FEE38_13350 PF13801 Heavy-metal resistance FEE38_13355 PF07356 Protein of unknown function (DUF1481) FEE38_13360 PF00216 Bacterial DNA-binding protein FEE38_13365 PF04222 Protein of unknown function (DUF416) FEE38_13370 PF04493 Endonuclease V FEE38_13375 PF01208 Uroporphyrinogen decarboxylase (URO-D) FEE38_13380 PF00293 NUDIX domain FEE38_13380 PF09297 NADH pyrophosphatase zinc ribbon domain FEE38_13385 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FEE38_13390 PF13667 ThiC-associated domain FEE38_13390 PF01964 Radical SAM ThiC family FEE38_13395 PF02581 Thiamine monophosphate synthase FEE38_13400 PF00899 ThiF family FEE38_13405 PF02597 ThiS family FEE38_13410 PF05690 Thiazole biosynthesis protein ThiG FEE38_13415 PF06968 Biotin and Thiamin Synthesis associated domain FEE38_13415 PF04055 Radical SAM superfamily FEE38_13420 PF00990 Diguanylate cyclase, GGDEF domain FEE38_13425 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_13430 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FEE38_13435 PF03605 Anaerobic c4-dicarboxylate membrane transporter FEE38_13440 PF04998 RNA polymerase Rpb1, domain 5 FEE38_13440 PF04997 RNA polymerase Rpb1, domain 1 FEE38_13440 PF00623 RNA polymerase Rpb1, domain 2 FEE38_13440 PF04983 RNA polymerase Rpb1, domain 3 FEE38_13440 PF05000 RNA polymerase Rpb1, domain 4 FEE38_13445 PF04560 RNA polymerase Rpb2, domain 7 FEE38_13445 PF04563 RNA polymerase beta subunit FEE38_13445 PF04561 RNA polymerase Rpb2, domain 2 FEE38_13445 PF04565 RNA polymerase Rpb2, domain 3 FEE38_13445 PF00562 RNA polymerase Rpb2, domain 6 FEE38_13445 PF10385 RNA polymerase beta subunit external 1 domain FEE38_13450 PF16320 Ribosomal protein L7/L12 dimerisation domain FEE38_13450 PF00542 Ribosomal protein L7/L12 C-terminal domain FEE38_13455 PF00466 Ribosomal protein L10 FEE38_13460 PF00687 Ribosomal protein L1p/L10e family FEE38_13465 PF00298 Ribosomal protein L11, RNA binding domain FEE38_13465 PF03946 Ribosomal protein L11, N-terminal domain FEE38_13470 PF02357 Transcription termination factor nusG FEE38_13470 PF00467 KOW motif FEE38_13475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FEE38_13480 PF03144 Elongation factor Tu domain 2 FEE38_13480 PF03143 Elongation factor Tu C-terminal domain FEE38_13480 PF00009 Elongation factor Tu GTP binding domain FEE38_13505 PF00485 Phosphoribulokinase / Uridine kinase family FEE38_13510 PF02237 Biotin protein ligase C terminal domain FEE38_13510 PF08279 HTH domain FEE38_13510 PF03099 Biotin/lipoate A/B protein ligase family FEE38_13515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FEE38_13515 PF01565 FAD binding domain FEE38_13545 PF12724 Flavodoxin domain FEE38_13550 PF02386 Cation transport protein FEE38_13555 PF09186 Domain of unknown function (DUF1949) FEE38_13555 PF01205 Uncharacterized protein family UPF0029 FEE38_13560 PF00557 Metallopeptidase family M24 FEE38_13565 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FEE38_13565 PF00378 Enoyl-CoA hydratase/isomerase FEE38_13565 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FEE38_13570 PF00108 Thiolase, N-terminal domain FEE38_13570 PF02803 Thiolase, C-terminal domain FEE38_13575 PF00970 Oxidoreductase FAD-binding domain FEE38_13575 PF00175 Oxidoreductase NAD-binding domain FEE38_13580 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FEE38_13585 PF02357 Transcription termination factor nusG FEE38_13590 PF01026 TatD related DNase FEE38_13595 PF00902 Sec-independent protein translocase protein (TatC) FEE38_13605 PF02416 mttA/Hcf106 family FEE38_13610 PF03109 ABC1 family FEE38_13615 PF02036 SCP-2 sterol transfer family FEE38_13620 PF01209 ubiE/COQ5 methyltransferase family FEE38_13625 PF02646 RmuC family FEE38_13630 PF01048 Phosphorylase superfamily FEE38_13635 PF01738 Dienelactone hydrolase family FEE38_13640 PF01717 Cobalamin-independent synthase, Catalytic domain FEE38_13640 PF08267 Cobalamin-independent synthase, N-terminal domain FEE38_13645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_13645 PF03466 LysR substrate binding domain FEE38_13650 PF00892 EamA-like transporter family FEE38_13660 PF12146 Serine aminopeptidase, S33 FEE38_13665 PF01810 LysE type translocator FEE38_13670 PF04754 Putative transposase, YhgA-like FEE38_13675 PF01810 LysE type translocator FEE38_13680 PF00270 DEAD/DEAH box helicase FEE38_13680 PF00271 Helicase conserved C-terminal domain FEE38_13680 PF00570 HRDC domain FEE38_13680 PF16124 RecQ zinc-binding FEE38_13680 PF09382 RQC domain FEE38_13685 PF02253 Phospholipase A1 FEE38_13690 PF03061 Thioesterase superfamily FEE38_13695 PF00892 EamA-like transporter family FEE38_13700 PF01544 CorA-like Mg2+ transporter protein FEE38_13705 PF13361 UvrD-like helicase C-terminal domain FEE38_13705 PF00580 UvrD/REP helicase N-terminal domain FEE38_13710 PF13419 Haloacid dehalogenase-like hydrolase FEE38_13715 PF00589 Phage integrase family FEE38_13715 PF02899 Phage integrase, N-terminal SAM-like domain FEE38_13720 PF04340 Protein of unknown function, DUF484 FEE38_13725 PF01678 Diaminopimelate epimerase FEE38_13730 PF13627 Prokaryotic lipoprotein-attachment site FEE38_13735 PF01491 Frataxin-like domain FEE38_13740 PF12633 Adenylate cyclase NT domain FEE38_13740 PF01295 Adenylate cyclase, class-I FEE38_13745 PF03900 Porphobilinogen deaminase, C-terminal domain FEE38_13745 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FEE38_13750 PF02602 Uroporphyrinogen-III synthase HemD FEE38_13755 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FEE38_13760 PF07719 Tetratricopeptide repeat FEE38_13760 PF07219 HemY protein N-terminus FEE38_13785 PF00324 Amino acid permease FEE38_13790 PF03808 Glycosyl transferase WecB/TagA/CpsF family FEE38_13795 PF06899 WzyE protein, O-antigen assembly polymerase FEE38_13800 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FEE38_13805 PF01943 Polysaccharide biosynthesis protein FEE38_13810 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FEE38_13820 PF00483 Nucleotidyl transferase FEE38_13825 PF16363 GDP-mannose 4,6 dehydratase FEE38_13830 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FEE38_13830 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FEE38_13830 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FEE38_13835 PF02350 UDP-N-acetylglucosamine 2-epimerase FEE38_13840 PF02706 Chain length determinant protein FEE38_13845 PF00953 Glycosyl transferase family 4 FEE38_13850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FEE38_13850 PF07498 Rho termination factor, N-terminal domain FEE38_13850 PF07497 Rho termination factor, RNA-binding domain FEE38_13860 PF00085 Thioredoxin FEE38_13865 PF00270 DEAD/DEAH box helicase FEE38_13865 PF00271 Helicase conserved C-terminal domain FEE38_13870 PF02541 Ppx/GppA phosphatase family FEE38_13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_13875 PF03466 LysR substrate binding domain FEE38_13885 PF04474 Protein of unknown function (DUF554) FEE38_13890 PF00580 UvrD/REP helicase N-terminal domain FEE38_13890 PF13361 UvrD-like helicase C-terminal domain FEE38_13905 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FEE38_13905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FEE38_13910 PF03466 LysR substrate binding domain FEE38_13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_13915 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_13915 PF00585 C-terminal regulatory domain of Threonine dehydratase FEE38_13920 PF00920 Dehydratase family FEE38_13925 PF01063 Amino-transferase class IV FEE38_13935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_13935 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_13940 PF08046 IlvGEDA operon leader peptide FEE38_13945 PF13335 Magnesium chelatase, subunit ChlI C-terminal FEE38_13945 PF01078 Magnesium chelatase, subunit ChlI FEE38_13950 PF04219 Protein of unknown function, DUF FEE38_13955 PF03466 LysR substrate binding domain FEE38_13955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_13995 PF01177 Asp/Glu/Hydantoin racemase FEE38_14000 PF07715 TonB-dependent Receptor Plug Domain FEE38_14000 PF00593 TonB dependent receptor FEE38_14005 PF05958 tRNA (Uracil-5-)-methyltransferase FEE38_14010 PF07226 Protein of unknown function (DUF1422) FEE38_14015 PF00440 Bacterial regulatory proteins, tetR family FEE38_14020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_14020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FEE38_14025 PF03466 LysR substrate binding domain FEE38_14025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_14030 PF00206 Lyase FEE38_14030 PF14698 Argininosuccinate lyase C-terminal FEE38_14035 PF00696 Amino acid kinase family FEE38_14040 PF01118 Semialdehyde dehydrogenase, NAD binding domain FEE38_14040 PF02774 Semialdehyde dehydrogenase, dimerisation domain FEE38_14045 PF07687 Peptidase dimerisation domain FEE38_14045 PF01546 Peptidase family M20/M25/M40 FEE38_14050 PF00311 Phosphoenolpyruvate carboxylase FEE38_14055 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FEE38_14060 PF12833 Helix-turn-helix domain FEE38_14065 PF00923 Transaldolase/Fructose-6-phosphate aldolase FEE38_14070 PF00465 Iron-containing alcohol dehydrogenase FEE38_14075 PF00892 EamA-like transporter family FEE38_14080 PF02219 Methylenetetrahydrofolate reductase FEE38_14085 PF03466 LysR substrate binding domain FEE38_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_14090 PF02627 Carboxymuconolactone decarboxylase family FEE38_14095 PF00149 Calcineurin-like phosphoesterase FEE38_14095 PF02872 5'-nucleotidase, C-terminal domain FEE38_14105 PF03447 Homoserine dehydrogenase, NAD binding domain FEE38_14105 PF00696 Amino acid kinase family FEE38_14105 PF00742 Homoserine dehydrogenase FEE38_14110 PF01053 Cys/Met metabolism PLP-dependent enzyme FEE38_14115 PF01340 Met Apo-repressor, MetJ FEE38_14120 PF01197 Ribosomal protein L31 FEE38_14125 PF00271 Helicase conserved C-terminal domain FEE38_14125 PF18074 Primosomal protein N C-terminal domain FEE38_14125 PF00270 DEAD/DEAH box helicase FEE38_14125 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FEE38_14125 PF17764 3′ DNA-binding domain (3′BD) FEE38_14130 PF00356 Bacterial regulatory proteins, lacI family FEE38_14135 PF05036 Sporulation related domain FEE38_14140 PF00227 Proteasome subunit FEE38_14145 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_14145 PF07724 AAA domain (Cdc48 subfamily) FEE38_14145 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_14150 PF01040 UbiA prenyltransferase family FEE38_14155 PF03737 Aldolase/RraA FEE38_14160 PF00365 Phosphofructokinase FEE38_14165 PF16916 Dimerisation domain of Zinc Transporter FEE38_14165 PF01545 Cation efflux family FEE38_14170 PF07813 LTXXQ motif family protein FEE38_14175 PF00072 Response regulator receiver domain FEE38_14175 PF00486 Transcriptional regulatory protein, C terminal FEE38_14180 PF00512 His Kinase A (phospho-acceptor) domain FEE38_14180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_14180 PF00672 HAMP domain FEE38_14180 PF16527 Two-component sensor protein CpxA, periplasmic domain FEE38_14185 PF03475 3-alpha domain FEE38_14185 PF03473 MOSC domain FEE38_14190 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FEE38_14190 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FEE38_14195 PF06379 L-rhamnose-proton symport protein (RhaT) FEE38_14200 PF12833 Helix-turn-helix domain FEE38_14200 PF02311 AraC-like ligand binding domain FEE38_14205 PF02311 AraC-like ligand binding domain FEE38_14205 PF12833 Helix-turn-helix domain FEE38_14215 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_14215 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_14220 PF06134 L-rhamnose isomerase (RhaA) FEE38_14225 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_14230 PF13407 Periplasmic binding protein domain FEE38_14235 PF00005 ABC transporter FEE38_14240 PF02653 Branched-chain amino acid transport system / permease component FEE38_14245 PF02653 Branched-chain amino acid transport system / permease component FEE38_14250 PF00465 Iron-containing alcohol dehydrogenase FEE38_14255 PF05336 L-rhamnose mutarotase FEE38_14260 PF01306 LacY proton/sugar symporter FEE38_14265 PF16875 Glycosyl hydrolase family 36 N-terminal domain FEE38_14265 PF16874 Glycosyl hydrolase family 36 C-terminal domain FEE38_14270 PF00356 Bacterial regulatory proteins, lacI family FEE38_14270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_14295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_14305 PF01116 Fructose-bisphosphate aldolase class-II FEE38_14310 PF03611 PTS system sugar-specific permease component FEE38_14320 PF00365 Phosphofructokinase FEE38_14330 PF02634 FdhD/NarQ family FEE38_14340 PF09163 Formate dehydrogenase N, transmembrane FEE38_14340 PF13247 4Fe-4S dicluster domain FEE38_14345 PF01292 Prokaryotic cytochrome b561 FEE38_14350 PF04216 Protein involved in formate dehydrogenase formation FEE38_14365 PF07859 alpha/beta hydrolase fold FEE38_14370 PF09500 Putative thioesterase (yiiD_Cterm) FEE38_14370 PF00583 Acetyltransferase (GNAT) family FEE38_14375 PF02580 D-Tyr-tRNA(Tyr) deacylase FEE38_14380 PF03631 Virulence factor BrkB FEE38_14385 PF13419 Haloacid dehalogenase-like hydrolase FEE38_14395 PF03951 Glutamine synthetase, beta-Grasp domain FEE38_14395 PF00120 Glutamine synthetase, catalytic domain FEE38_14400 PF00512 His Kinase A (phospho-acceptor) domain FEE38_14400 PF00989 PAS fold FEE38_14400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_14405 PF00072 Response regulator receiver domain FEE38_14405 PF00158 Sigma-54 interaction domain FEE38_14405 PF02954 Bacterial regulatory protein, Fis family FEE38_14415 PF04055 Radical SAM superfamily FEE38_14415 PF06969 HemN C-terminal domain FEE38_14425 PF04220 Der GTPase activator (YihI) FEE38_14430 PF01926 50S ribosome-binding GTPase FEE38_14435 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FEE38_14435 PF01367 5'-3' exonuclease, C-terminal SAM fold FEE38_14435 PF01612 3'-5' exonuclease FEE38_14435 PF00476 DNA polymerase family A FEE38_14440 PF01553 Acyltransferase FEE38_14445 PF01323 DSBA-like thioredoxin domain FEE38_14450 PF01636 Phosphotransferase enzyme family FEE38_14455 PF06288 Protein of unknown function (DUF1040) FEE38_14460 PF12804 MobA-like NTP transferase domain FEE38_14465 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FEE38_14495 PF00392 Bacterial regulatory proteins, gntR family FEE38_14495 PF07729 FCD domain FEE38_14500 PF07690 Major Facilitator Superfamily FEE38_14505 PF00356 Bacterial regulatory proteins, lacI family FEE38_14510 PF00294 pfkB family carbohydrate kinase FEE38_14515 PF13407 Periplasmic binding protein domain FEE38_14520 PF02653 Branched-chain amino acid transport system / permease component FEE38_14525 PF00005 ABC transporter FEE38_14530 PF05025 RbsD / FucU transport protein family FEE38_14535 PF02705 K+ potassium transporter FEE38_14540 PF07728 AAA domain (dynein-related subfamily) FEE38_14540 PF17868 AAA lid domain FEE38_14540 PF12592 Protein of unknown function (DUF3763) FEE38_14545 PF05762 VWA domain containing CoxE-like protein FEE38_14550 PF03590 Aspartate-ammonia ligase FEE38_14555 PF01037 Lrp/AsnC ligand binding domain FEE38_14560 PF00258 Flavodoxin FEE38_14565 PF01134 Glucose inhibited division protein A FEE38_14565 PF13932 GidA associated domain FEE38_14570 PF02527 rRNA small subunit methyltransferase G FEE38_14575 PF03899 ATP synthase I chain FEE38_14580 PF00119 ATP synthase A chain FEE38_14585 PF00137 ATP synthase subunit C FEE38_14590 PF00430 ATP synthase B/B' CF(0) FEE38_14595 PF00213 ATP synthase delta (OSCP) subunit FEE38_14600 PF02874 ATP synthase alpha/beta family, beta-barrel domain FEE38_14600 PF00306 ATP synthase alpha/beta chain, C terminal domain FEE38_14600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FEE38_14605 PF00231 ATP synthase FEE38_14610 PF02874 ATP synthase alpha/beta family, beta-barrel domain FEE38_14610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FEE38_14615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FEE38_14615 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FEE38_14625 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_14625 PF12804 MobA-like NTP transferase domain FEE38_14630 PF01380 SIS domain FEE38_14635 PF12849 PBP superfamily domain FEE38_14640 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_14645 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_14655 PF05893 Acyl-CoA reductase (LuxC) FEE38_14660 PF02273 Acyl transferase FEE38_14665 PF00296 Luciferase-like monooxygenase FEE38_14670 PF00296 Luciferase-like monooxygenase FEE38_14675 PF04443 Acyl-protein synthetase, LuxE FEE38_14690 PF01636 Phosphotransferase enzyme family FEE38_14705 PF01895 PhoU domain FEE38_14710 PF11471 Maltoporin periplasmic N-terminal extension FEE38_14710 PF02264 LamB porin FEE38_14715 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FEE38_14715 PF00756 Putative esterase FEE38_14720 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FEE38_14725 PF13419 Haloacid dehalogenase-like hydrolase FEE38_14735 PF00860 Permease family FEE38_14740 PF03358 NADPH-dependent FMN reductase FEE38_14750 PF03466 LysR substrate binding domain FEE38_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_14755 PF07690 Major Facilitator Superfamily FEE38_14765 PF12631 MnmE helical domain FEE38_14765 PF01926 50S ribosome-binding GTPase FEE38_14765 PF10396 GTP-binding protein TrmE N-terminus FEE38_14770 PF14849 YidC periplasmic domain FEE38_14770 PF02096 60Kd inner membrane protein FEE38_14775 PF01809 Putative membrane protein insertion efficiency factor FEE38_14780 PF00825 Ribonuclease P FEE38_14785 PF00468 Ribosomal protein L34 FEE38_14790 PF00308 Bacterial dnaA protein FEE38_14790 PF08299 Bacterial dnaA protein helix-turn-helix FEE38_14790 PF11638 DnaA N-terminal domain FEE38_14795 PF02768 DNA polymerase III beta subunit, C-terminal domain FEE38_14795 PF02767 DNA polymerase III beta subunit, central domain FEE38_14795 PF00712 DNA polymerase III beta subunit, N-terminal domain FEE38_14800 PF02463 RecF/RecN/SMC N terminal domain FEE38_14805 PF18053 DNA gyrase B subunit insert domain FEE38_14805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_14805 PF01751 Toprim domain FEE38_14805 PF00204 DNA gyrase B FEE38_14805 PF00986 DNA gyrase B subunit, carboxyl terminus FEE38_14825 PF00392 Bacterial regulatory proteins, gntR family FEE38_14825 PF07729 FCD domain FEE38_14830 PF05035 2-keto-3-deoxy-galactonokinase FEE38_14835 PF01081 KDPG and KHG aldolase FEE38_14840 PF13378 Enolase C-terminal domain-like FEE38_14840 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FEE38_14845 PF07690 Major Facilitator Superfamily FEE38_14850 PF12566 Protein of unknown function (DUF3748) FEE38_14850 PF07676 WD40-like Beta Propeller Repeat FEE38_14855 PF07119 Protein of unknown function (DUF1375) FEE38_14860 PF00011 Hsp20/alpha crystallin family FEE38_14865 PF00011 Hsp20/alpha crystallin family FEE38_14875 PF02080 TrkA-C domain FEE38_14875 PF06826 Predicted Permease Membrane Region FEE38_14880 PF00392 Bacterial regulatory proteins, gntR family FEE38_14880 PF07702 UTRA domain FEE38_14885 PF00367 phosphotransferase system, EIIB FEE38_14885 PF02378 Phosphotransferase system, EIIC FEE38_14890 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_14890 PF02056 Family 4 glycosyl hydrolase FEE38_14895 PF02656 Domain of unknown function (DUF202) FEE38_14900 PF02656 Domain of unknown function (DUF202) FEE38_14910 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_14915 PF02447 GntP family permease FEE38_14920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_14920 PF03466 LysR substrate binding domain FEE38_14925 PF07690 Major Facilitator Superfamily FEE38_14950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_14950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_14950 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_14955 PF01842 ACT domain FEE38_14960 PF00072 Response regulator receiver domain FEE38_14960 PF00196 Bacterial regulatory proteins, luxR family FEE38_14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_14965 PF07730 Histidine kinase FEE38_14965 PF05231 MASE1 FEE38_14970 PF07690 Major Facilitator Superfamily FEE38_14975 PF07690 Major Facilitator Superfamily FEE38_14980 PF06711 Protein of unknown function (DUF1198) FEE38_14995 PF07690 Major Facilitator Superfamily FEE38_15005 PF00266 Aminotransferase class-V FEE38_15015 PF00392 Bacterial regulatory proteins, gntR family FEE38_15015 PF07702 UTRA domain FEE38_15020 PF01547 Bacterial extracellular solute-binding protein FEE38_15025 PF00005 ABC transporter FEE38_15025 PF08402 TOBE domain FEE38_15030 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_15035 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_15040 PF02264 LamB porin FEE38_15045 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FEE38_15050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_15050 PF02378 Phosphotransferase system, EIIC FEE38_15055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_15060 PF00356 Bacterial regulatory proteins, lacI family FEE38_15065 PF07690 Major Facilitator Superfamily FEE38_15070 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FEE38_15070 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit FEE38_15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_15075 PF03466 LysR substrate binding domain FEE38_15080 PF02585 GlcNAc-PI de-N-acetylase FEE38_15085 PF03737 Aldolase/RraA FEE38_15090 PF04303 PrpF protein FEE38_15105 PF00892 EamA-like transporter family FEE38_15110 PF00367 phosphotransferase system, EIIB FEE38_15110 PF02378 Phosphotransferase system, EIIC FEE38_15115 PF13580 SIS domain FEE38_15120 PF07690 Major Facilitator Superfamily FEE38_15125 PF02321 Outer membrane efflux protein FEE38_15130 PF00873 AcrB/AcrD/AcrF family FEE38_15135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_15135 PF00529 HlyD membrane-fusion protein of T1SS FEE38_15145 PF00583 Acetyltransferase (GNAT) family FEE38_15155 PF00440 Bacterial regulatory proteins, tetR family FEE38_15160 PF07690 Major Facilitator Superfamily FEE38_15165 PF03466 LysR substrate binding domain FEE38_15165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_15190 PF03180 NLPA lipoprotein FEE38_15200 PF00293 NUDIX domain FEE38_15205 PF12706 Beta-lactamase superfamily domain FEE38_15210 PF01965 DJ-1/PfpI family FEE38_15215 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_15215 PF00107 Zinc-binding dehydrogenase FEE38_15230 PF00107 Zinc-binding dehydrogenase FEE38_15230 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_15255 PF13802 Galactose mutarotase-like FEE38_15255 PF01055 Glycosyl hydrolases family 31 FEE38_15265 PF11975 Family 4 glycosyl hydrolase C-terminal domain FEE38_15265 PF02056 Family 4 glycosyl hydrolase FEE38_15270 PF00367 phosphotransferase system, EIIB FEE38_15270 PF02378 Phosphotransferase system, EIIC FEE38_15275 PF05170 AsmA family FEE38_15285 PF00860 Permease family FEE38_15290 PF03616 Sodium/glutamate symporter FEE38_15295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_15295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_15300 PF00230 Major intrinsic protein FEE38_15305 PF06005 Cell division protein ZapB FEE38_15315 PF02611 CDP-diacylglycerol pyrophosphatase FEE38_15325 PF00121 Triosephosphate isomerase FEE38_15330 PF07305 Protein of unknown function (DUF1454) FEE38_15335 PF05656 Protein of unknown function (DUF805) FEE38_15340 PF00175 Oxidoreductase NAD-binding domain FEE38_15340 PF00970 Oxidoreductase FAD-binding domain FEE38_15345 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FEE38_15350 PF00271 Helicase conserved C-terminal domain FEE38_15350 PF17191 RecG wedge domain FEE38_15350 PF00270 DEAD/DEAH box helicase FEE38_15355 PF12105 SpoU, rRNA methylase, C-terminal FEE38_15355 PF00588 SpoU rRNA Methylase family FEE38_15360 PF02824 TGS domain FEE38_15360 PF13291 ACT domain FEE38_15360 PF04607 Region found in RelA / SpoT proteins FEE38_15365 PF01192 RNA polymerase Rpb6 FEE38_15370 PF00625 Guanylate kinase FEE38_15375 PF01653 NAD-dependent DNA ligase adenylation domain FEE38_15375 PF03120 NAD-dependent DNA ligase OB-fold domain FEE38_15380 PF03458 UPF0126 domain FEE38_15390 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FEE38_15390 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FEE38_15390 PF12833 Helix-turn-helix domain FEE38_15390 PF02805 Metal binding domain of Ada FEE38_15400 PF03755 YicC-like family, N-terminal region FEE38_15400 PF08340 Domain of unknown function (DUF1732) FEE38_15415 PF00005 ABC transporter FEE38_15425 PF03725 3' exoribonuclease family, domain 2 FEE38_15425 PF01138 3' exoribonuclease family, domain 1 FEE38_15430 PF00156 Phosphoribosyl transferase domain FEE38_15440 PF00440 Bacterial regulatory proteins, tetR family FEE38_15445 PF00692 dUTPase FEE38_15450 PF02441 Flavoprotein FEE38_15450 PF04127 DNA / pantothenate metabolism flavoprotein FEE38_15455 PF04002 RadC-like JAB domain FEE38_15460 PF00830 Ribosomal L28 family FEE38_15465 PF00471 Ribosomal protein L33 FEE38_15470 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FEE38_15470 PF06827 Zinc finger found in FPG and IleRS FEE38_15470 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FEE38_15475 PF01467 Cytidylyltransferase-like FEE38_15480 PF00535 Glycosyl transferase family 2 FEE38_15485 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FEE38_15490 PF00535 Glycosyl transferase family 2 FEE38_15495 PF00534 Glycosyl transferases group 1 FEE38_15495 PF13439 Glycosyltransferase Family 4 FEE38_15500 PF00534 Glycosyl transferases group 1 FEE38_15500 PF13439 Glycosyltransferase Family 4 FEE38_15505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FEE38_15520 PF04932 O-Antigen ligase FEE38_15530 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FEE38_15535 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FEE38_15540 PF01370 NAD dependent epimerase/dehydratase family FEE38_15545 PF00155 Aminotransferase class I and II FEE38_15550 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_15550 PF00107 Zinc-binding dehydrogenase FEE38_15555 PF00535 Glycosyl transferase family 2 FEE38_15560 PF04748 Divergent polysaccharide deacetylase FEE38_15565 PF01551 Peptidase family M23 FEE38_15570 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FEE38_15570 PF01676 Metalloenzyme superfamily FEE38_15575 PF00581 Rhodanese-like domain FEE38_15580 PF00462 Glutaredoxin FEE38_15585 PF02556 Preprotein translocase subunit SecB FEE38_15590 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FEE38_15590 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FEE38_15595 PF06426 Serine acetyltransferase, N-terminal FEE38_15595 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_15600 PF00588 SpoU rRNA Methylase family FEE38_15605 PF01070 FMN-dependent dehydrogenase FEE38_15610 PF07729 FCD domain FEE38_15610 PF00392 Bacterial regulatory proteins, gntR family FEE38_15615 PF02652 L-lactate permease FEE38_15620 PF10928 Protein of unknown function (DUF2810) FEE38_15630 PF05068 Mannitol repressor FEE38_15635 PF08125 Mannitol dehydrogenase C-terminal domain FEE38_15635 PF01232 Mannitol dehydrogenase Rossmann domain FEE38_15640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_15640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_15640 PF02378 Phosphotransferase system, EIIC FEE38_15645 PF11742 Protein of unknown function (DUF3302) FEE38_15650 PF00529 HlyD membrane-fusion protein of T1SS FEE38_15650 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_15655 PF00043 Glutathione S-transferase, C-terminal domain FEE38_15655 PF13417 Glutathione S-transferase, N-terminal domain FEE38_15660 PF03841 L-seryl-tRNA selenium transferase FEE38_15660 PF12390 Selenocysteine synthase N terminal FEE38_15665 PF00009 Elongation factor Tu GTP binding domain FEE38_15665 PF03144 Elongation factor Tu domain 2 FEE38_15665 PF09106 Elongation factor SelB, winged helix FEE38_15665 PF09107 Elongation factor SelB, winged helix FEE38_15670 PF09339 IclR helix-turn-helix domain FEE38_15670 PF01614 Bacterial transcriptional regulator FEE38_15675 PF12800 4Fe-4S binding domain FEE38_15675 PF13247 4Fe-4S dicluster domain FEE38_15680 PF00155 Aminotransferase class I and II FEE38_15685 PF00128 Alpha amylase, catalytic domain FEE38_15690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FEE38_15695 PF12833 Helix-turn-helix domain FEE38_15705 PF00005 ABC transporter FEE38_15710 PF13407 Periplasmic binding protein domain FEE38_15720 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_15720 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_15725 PF05360 yiaA/B two helix domain FEE38_15730 PF05360 yiaA/B two helix domain FEE38_15735 PF01757 Acyltransferase family FEE38_15740 PF13983 YsaB-like lipoprotein FEE38_15745 PF02091 Glycyl-tRNA synthetase alpha subunit FEE38_15750 PF05746 DALR anticodon binding domain FEE38_15750 PF02092 Glycyl-tRNA synthetase beta subunit FEE38_15760 PF01848 Hok/gef family FEE38_15765 PF12848 ABC transporter FEE38_15765 PF00005 ABC transporter FEE38_15770 PF00313 'Cold-shock' DNA-binding domain FEE38_15775 PF01381 Helix-turn-helix FEE38_15780 PF07690 Major Facilitator Superfamily FEE38_15790 PF11254 Protein of unknown function (DUF3053) FEE38_15795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_15795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_15800 PF07690 Major Facilitator Superfamily FEE38_15805 PF00294 pfkB family carbohydrate kinase FEE38_15815 PF00356 Bacterial regulatory proteins, lacI family FEE38_15820 PF00691 OmpA family FEE38_15820 PF13488 Glycine zipper FEE38_15825 PF00384 Molybdopterin oxidoreductase FEE38_15825 PF01568 Molydopterin dinucleotide binding domain FEE38_15825 PF18364 Molybdopterin oxidoreductase N-terminal domain FEE38_15830 PF00583 Acetyltransferase (GNAT) family FEE38_15835 PF03352 Methyladenine glycosylase FEE38_15840 PF03797 Autotransporter beta-domain FEE38_15845 PF07690 Major Facilitator Superfamily FEE38_15850 PF00884 Sulfatase FEE38_15850 PF08019 Phosphoethanolamine transferase EptA/EptB FEE38_15870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_15875 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_15880 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_15880 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_15885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_15885 PF00005 ABC transporter FEE38_15890 PF00005 ABC transporter FEE38_15890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_15905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FEE38_15910 PF07238 PilZ domain FEE38_15910 PF00535 Glycosyl transferase family 2 FEE38_15910 PF03170 Bacterial cellulose synthase subunit FEE38_15910 PF03552 Cellulose synthase FEE38_15915 PF03170 Bacterial cellulose synthase subunit FEE38_15920 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FEE38_15930 PF13737 Transposase DDE domain FEE38_15940 PF01270 Glycosyl hydrolases family 8 FEE38_15945 PF11658 Cellulose biosynthesis protein BcsG FEE38_15950 PF11120 Cellulose biosynthesis protein BcsF FEE38_15955 PF10995 Cellulose biosynthesis GIL FEE38_15960 PF10945 Cellulose biosynthesis protein BcsR FEE38_15965 PF06564 Cellulose biosynthesis protein BcsQ FEE38_15970 PF07238 PilZ domain FEE38_15970 PF00535 Glycosyl transferase family 2 FEE38_15975 PF03170 Bacterial cellulose synthase subunit FEE38_15980 PF01270 Glycosyl hydrolases family 8 FEE38_15985 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FEE38_15990 PF00672 HAMP domain FEE38_15990 PF00563 EAL domain FEE38_15990 PF00990 Diguanylate cyclase, GGDEF domain FEE38_15990 PF17154 Gammaproteobacterial periplasmic sensor domain FEE38_15995 PF00375 Sodium:dicarboxylate symporter family FEE38_16000 PF00675 Insulinase (Peptidase family M16) FEE38_16000 PF05193 Peptidase M16 inactive domain FEE38_16005 PF00294 pfkB family carbohydrate kinase FEE38_16015 PF05170 AsmA family FEE38_16020 PF00083 Sugar (and other) transporter FEE38_16020 PF07690 Major Facilitator Superfamily FEE38_16025 PF03631 Virulence factor BrkB FEE38_16030 PF03466 LysR substrate binding domain FEE38_16030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_16040 PF13302 Acetyltransferase (GNAT) domain FEE38_16045 PF01204 Trehalase FEE38_16050 PF00465 Iron-containing alcohol dehydrogenase FEE38_16060 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FEE38_16060 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_16065 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FEE38_16070 PF01569 PAP2 superfamily FEE38_16075 PF01432 Peptidase family M3 FEE38_16080 PF04445 Putative SAM-dependent methyltransferase FEE38_16085 PF00854 POT family FEE38_16090 PF00582 Universal stress protein family FEE38_16095 PF10625 Universal stress protein B (UspB) FEE38_16100 PF01384 Phosphate transporter family FEE38_16110 PF03448 MgtE intracellular N domain FEE38_16110 PF01769 Divalent cation transporter FEE38_16110 PF00571 CBS domain FEE38_16115 PF01402 Ribbon-helix-helix protein, copG family FEE38_16115 PF08753 NikR C terminal nickel binding domain FEE38_16120 PF00005 ABC transporter FEE38_16125 PF00005 ABC transporter FEE38_16130 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_16135 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_16140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_16145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_16145 PF03466 LysR substrate binding domain FEE38_16150 PF05870 Phenolic acid decarboxylase (PAD) FEE38_16155 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FEE38_16160 PF00535 Glycosyl transferase family 2 FEE38_16165 PF01370 NAD dependent epimerase/dehydratase family FEE38_16165 PF00551 Formyl transferase FEE38_16165 PF02911 Formyl transferase, C-terminal domain FEE38_16170 PF01522 Polysaccharide deacetylase FEE38_16175 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FEE38_16180 PF00892 EamA-like transporter family FEE38_16190 PF01594 AI-2E family transporter FEE38_16195 PF07690 Major Facilitator Superfamily FEE38_16200 PF08786 DcrB FEE38_16205 PF02592 Putative vitamin uptake transporter FEE38_16210 PF01206 Sulfurtransferase TusA FEE38_16215 PF00403 Heavy-metal-associated domain FEE38_16220 PF07947 YhhN family FEE38_16225 PF10694 Protein of unknown function (DUF2500) FEE38_16230 PF06611 Protein of unknown function (DUF1145) FEE38_16240 PF02881 SRP54-type protein, helical bundle domain FEE38_16240 PF00448 SRP54-type protein, GTPase domain FEE38_16245 PF00005 ABC transporter FEE38_16250 PF02687 FtsX-like permease family FEE38_16250 PF18075 FtsX extracellular domain FEE38_16255 PF04542 Sigma-70 region 2 FEE38_16255 PF04545 Sigma-70, region 4 FEE38_16260 PF00392 Bacterial regulatory proteins, gntR family FEE38_16260 PF00155 Aminotransferase class I and II FEE38_16265 PF00202 Aminotransferase class-III FEE38_16275 PF13458 Periplasmic binding protein FEE38_16280 PF12568 Acetyltransferase (GNAT) domain, PanZ FEE38_16290 PF13458 Periplasmic binding protein FEE38_16295 PF02653 Branched-chain amino acid transport system / permease component FEE38_16300 PF11862 Domain of unknown function (DUF3382) FEE38_16300 PF02653 Branched-chain amino acid transport system / permease component FEE38_16305 PF00005 ABC transporter FEE38_16305 PF12399 Branched-chain amino acid ATP-binding cassette transporter FEE38_16310 PF00005 ABC transporter FEE38_16315 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FEE38_16325 PF13416 Bacterial extracellular solute-binding protein FEE38_16330 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_16335 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_16340 PF00005 ABC transporter FEE38_16340 PF17912 MalK OB fold domain FEE38_16345 PF03009 Glycerophosphoryl diester phosphodiesterase family FEE38_16350 PF10956 Protein of unknown function (DUF2756) FEE38_16360 PF00583 Acetyltransferase (GNAT) family FEE38_16370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_16370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_16375 PF02678 Pirin FEE38_16375 PF17954 Quercetinase C-terminal cupin domain FEE38_16380 PF00356 Bacterial regulatory proteins, lacI family FEE38_16380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_16385 PF01202 Shikimate kinase FEE38_16390 PF02447 GntP family permease FEE38_16400 PF01118 Semialdehyde dehydrogenase, NAD binding domain FEE38_16400 PF02774 Semialdehyde dehydrogenase, dimerisation domain FEE38_16405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FEE38_16405 PF02806 Alpha amylase, C-terminal all-beta domain FEE38_16405 PF00128 Alpha amylase, catalytic domain FEE38_16410 PF00128 Alpha amylase, catalytic domain FEE38_16410 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FEE38_16410 PF18390 Glycogen debranching enzyme C-terminal domain FEE38_16415 PF00483 Nucleotidyl transferase FEE38_16420 PF00534 Glycosyl transferases group 1 FEE38_16420 PF08323 Starch synthase catalytic domain FEE38_16425 PF00343 Carbohydrate phosphorylase FEE38_16440 PF01266 FAD dependent oxidoreductase FEE38_16440 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FEE38_16445 PF00581 Rhodanese-like domain FEE38_16450 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FEE38_16450 PF01694 Rhomboid family FEE38_16455 PF08220 DeoR-like helix-turn-helix domain FEE38_16455 PF00455 DeoR C terminal sensor domain FEE38_16460 PF00196 Bacterial regulatory proteins, luxR family FEE38_16460 PF17874 MalT-like TPR region FEE38_16465 PF00343 Carbohydrate phosphorylase FEE38_16470 PF02446 4-alpha-glucanotransferase FEE38_16475 PF02447 GntP family permease FEE38_16480 PF01521 Iron-sulphur cluster biosynthesis FEE38_16480 PF01106 NifU-like domain FEE38_16485 PF00156 Phosphoribosyl transferase domain FEE38_16490 PF00561 alpha/beta hydrolase fold FEE38_16500 PF09012 FeoC like transcriptional regulator FEE38_16505 PF07670 Nucleoside recognition FEE38_16505 PF17910 FeoB cytosolic helical domain FEE38_16505 PF07664 Ferrous iron transport protein B C terminus FEE38_16505 PF02421 Ferrous iron transport protein B FEE38_16510 PF04023 FeoA domain FEE38_16515 PF09371 Tex-like protein N-terminal domain FEE38_16515 PF16921 Tex protein YqgF-like domain FEE38_16515 PF00575 S1 RNA binding domain FEE38_16515 PF17674 HHH domain FEE38_16520 PF03449 Transcription elongation factor, N-terminal FEE38_16520 PF01272 Transcription elongation factor, GreA/GreB, C-term FEE38_16525 PF00486 Transcriptional regulatory protein, C terminal FEE38_16525 PF00072 Response regulator receiver domain FEE38_16530 PF00672 HAMP domain FEE38_16530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_16530 PF00512 His Kinase A (phospho-acceptor) domain FEE38_16535 PF01293 Phosphoenolpyruvate carboxykinase FEE38_16540 PF01430 Hsp33 protein FEE38_16545 PF01479 S4 domain FEE38_16550 PF13419 Haloacid dehalogenase-like hydrolase FEE38_16555 PF07095 Intracellular growth attenuator protein IgaA FEE38_16560 PF00293 NUDIX domain FEE38_16565 PF00905 Penicillin binding protein transpeptidase domain FEE38_16565 PF00912 Transglycosylase FEE38_16565 PF17092 Penicillin-binding protein OB-like domain FEE38_16590 PF03958 Bacterial type II/III secretion system short domain FEE38_16590 PF00263 Bacterial type II and III secretion system protein FEE38_16595 PF01202 Shikimate kinase FEE38_16600 PF01761 3-dehydroquinate synthase FEE38_16605 PF05036 Sporulation related domain FEE38_16610 PF02086 D12 class N6 adenine-specific DNA methyltransferase FEE38_16615 PF00834 Ribulose-phosphate 3 epimerase family FEE38_16620 PF13419 Haloacid dehalogenase-like hydrolase FEE38_16625 PF00579 tRNA synthetases class I (W and Y) FEE38_16630 PF14824 Sirohaem biosynthesis protein central FEE38_16630 PF10414 Sirohaem synthase dimerisation region FEE38_16630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_16635 PF13806 Rieske-like [2Fe-2S] domain FEE38_16640 PF18267 Rubredoxin NAD+ reductase C-terminal domain FEE38_16640 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FEE38_16640 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_16640 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FEE38_16640 PF04324 BFD-like [2Fe-2S] binding domain FEE38_16645 PF07969 Amidohydrolase family FEE38_16650 PF07690 Major Facilitator Superfamily FEE38_16655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FEE38_16660 PF10832 Protein of unknown function (DUF2559) FEE38_16665 PF02661 Fic/DOC family FEE38_16670 PF00117 Glutamine amidotransferase class-I FEE38_16675 PF00202 Aminotransferase class-III FEE38_16680 PF12805 FUSC-like inner membrane protein yccS FEE38_16685 PF00027 Cyclic nucleotide-binding domain FEE38_16685 PF13545 Crp-like helix-turn-helix domain FEE38_16690 PF02566 OsmC-like protein FEE38_16695 PF00485 Phosphoribulokinase / Uridine kinase family FEE38_16700 PF06794 Uncharacterised protein family (UPF0270) FEE38_16705 PF00561 alpha/beta hydrolase fold FEE38_16715 PF12848 ABC transporter FEE38_16715 PF00005 ABC transporter FEE38_16720 PF02525 Flavodoxin-like fold FEE38_16725 PF02254 TrkA-N domain FEE38_16725 PF00999 Sodium/hydrogen exchanger family FEE38_16730 PF09526 Probable metal-binding protein (DUF2387) FEE38_16735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FEE38_16740 PF04102 SlyX FEE38_16745 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FEE38_16745 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FEE38_16750 PF13309 HTH domain FEE38_16750 PF08348 YheO-like PAS domain FEE38_16755 PF02635 DsrE/DsrF-like family FEE38_16760 PF02635 DsrE/DsrF-like family FEE38_16765 PF04077 DsrH like protein FEE38_16770 PF00164 Ribosomal protein S12/S23 FEE38_16775 PF00177 Ribosomal protein S7p/S5e FEE38_16780 PF00009 Elongation factor Tu GTP binding domain FEE38_16780 PF03764 Elongation factor G, domain IV FEE38_16780 PF00679 Elongation factor G C-terminus FEE38_16780 PF14492 Elongation Factor G, domain II FEE38_16780 PF03144 Elongation factor Tu domain 2 FEE38_16785 PF03143 Elongation factor Tu C-terminal domain FEE38_16785 PF03144 Elongation factor Tu domain 2 FEE38_16785 PF00009 Elongation factor Tu GTP binding domain FEE38_16790 PF04324 BFD-like [2Fe-2S] binding domain FEE38_16795 PF00210 Ferritin-like domain FEE38_16800 PF01478 Type IV leader peptidase family FEE38_16805 PF00338 Ribosomal protein S10p/S20e FEE38_16810 PF00297 Ribosomal protein L3 FEE38_16815 PF00573 Ribosomal protein L4/L1 family FEE38_16820 PF00276 Ribosomal protein L23 FEE38_16825 PF03947 Ribosomal Proteins L2, C-terminal domain FEE38_16825 PF00181 Ribosomal Proteins L2, RNA binding domain FEE38_16830 PF00203 Ribosomal protein S19 FEE38_16835 PF00237 Ribosomal protein L22p/L17e FEE38_16840 PF07650 KH domain FEE38_16840 PF00189 Ribosomal protein S3, C-terminal domain FEE38_16845 PF00252 Ribosomal protein L16p/L10e FEE38_16850 PF00831 Ribosomal L29 protein FEE38_16855 PF00366 Ribosomal protein S17 FEE38_16860 PF00238 Ribosomal protein L14p/L23e FEE38_16865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FEE38_16865 PF00467 KOW motif FEE38_16870 PF00673 ribosomal L5P family C-terminus FEE38_16870 PF00281 Ribosomal protein L5 FEE38_16875 PF00253 Ribosomal protein S14p/S29e FEE38_16880 PF00410 Ribosomal protein S8 FEE38_16885 PF00347 Ribosomal protein L6 FEE38_16890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FEE38_16895 PF00333 Ribosomal protein S5, N-terminal domain FEE38_16895 PF03719 Ribosomal protein S5, C-terminal domain FEE38_16900 PF00327 Ribosomal protein L30p/L7e FEE38_16905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FEE38_16910 PF00344 SecY translocase FEE38_16915 PF00444 Ribosomal protein L36 FEE38_16920 PF00416 Ribosomal protein S13/S18 FEE38_16925 PF00411 Ribosomal protein S11 FEE38_16930 PF00163 Ribosomal protein S4/S9 N-terminal domain FEE38_16930 PF01479 S4 domain FEE38_16935 PF01000 RNA polymerase Rpb3/RpoA insert domain FEE38_16935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FEE38_16935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FEE38_16940 PF01196 Ribosomal protein L17 FEE38_16945 PF09350 Domain of unknown function (DUF1992) FEE38_16950 PF13411 MerR HTH family regulatory protein FEE38_16955 PF03889 Alternative ribosome-rescue factor A FEE38_16960 PF01741 Large-conductance mechanosensitive channel, MscL FEE38_16965 PF02080 TrkA-C domain FEE38_16965 PF02254 TrkA-N domain FEE38_16970 PF01189 16S rRNA methyltransferase RsmB/F FEE38_16970 PF01029 NusB family FEE38_16975 PF00551 Formyl transferase FEE38_16975 PF02911 Formyl transferase, C-terminal domain FEE38_16980 PF01327 Polypeptide deformylase FEE38_16985 PF02481 DNA recombination-mediator protein A FEE38_16985 PF17782 DprA winged helix domain FEE38_16990 PF04361 Protein of unknown function (DUF494) FEE38_16995 PF01396 Topoisomerase DNA binding C4 zinc finger FEE38_17000 PF01300 Telomere recombination FEE38_17005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FEE38_17005 PF01488 Shikimate / quinate 5-dehydrogenase FEE38_17005 PF08501 Shikimate dehydrogenase substrate binding domain FEE38_17010 PF07369 Protein of unknown function (DUF1488) FEE38_17015 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_17050 PF00873 AcrB/AcrD/AcrF family FEE38_17055 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_17055 PF00529 HlyD membrane-fusion protein of T1SS FEE38_17060 PF08361 MAATS-type transcriptional repressor, C-terminal region FEE38_17060 PF00440 Bacterial regulatory proteins, tetR family FEE38_17065 PF02954 Bacterial regulatory protein, Fis family FEE38_17070 PF01207 Dihydrouridine synthase (Dus) FEE38_17085 PF00474 Sodium:solute symporter family FEE38_17090 PF06196 Protein of unknown function (DUF997) FEE38_17095 PF00289 Biotin carboxylase, N-terminal domain FEE38_17095 PF02785 Biotin carboxylase C-terminal domain FEE38_17095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FEE38_17100 PF00364 Biotin-requiring enzyme FEE38_17105 PF01220 Dehydroquinase class II FEE38_17110 PF01794 Ferric reductase like transmembrane component FEE38_17115 PF00174 Oxidoreductase molybdopterin binding domain FEE38_17125 PF00990 Diguanylate cyclase, GGDEF domain FEE38_17125 PF00563 EAL domain FEE38_17125 PF17157 Gammaproteobacterial periplasmic sensor domain FEE38_17135 PF04085 rod shape-determining protein MreC FEE38_17140 PF04093 rod shape-determining protein MreD FEE38_17145 PF02545 Maf-like protein FEE38_17150 PF00575 S1 RNA binding domain FEE38_17150 PF10150 Ribonuclease E/G family FEE38_17155 PF13116 Protein of unknown function FEE38_17155 PF13502 AsmA-like C-terminal region FEE38_17160 PF01523 Putative modulator of DNA gyrase FEE38_17165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_17165 PF03466 LysR substrate binding domain FEE38_17170 PF07869 Protein of unknown function (DUF1656) FEE38_17175 PF13533 Biotin-lipoyl like FEE38_17180 PF04632 Fusaric acid resistance protein family FEE38_17185 PF01337 Barstar (barnase inhibitor) FEE38_17190 PF07338 Protein of unknown function (DUF1471) FEE38_17195 PF07338 Protein of unknown function (DUF1471) FEE38_17200 PF01316 Arginine repressor, DNA binding domain FEE38_17200 PF02863 Arginine repressor, C-terminal domain FEE38_17205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FEE38_17205 PF00056 lactate/malate dehydrogenase, NAD binding domain FEE38_17210 PF00392 Bacterial regulatory proteins, gntR family FEE38_17220 PF00939 Sodium:sulfate symporter transmembrane region FEE38_17225 PF05681 Fumarate hydratase (Fumerase) FEE38_17230 PF05683 Fumarase C-terminus FEE38_17235 PF04277 Oxaloacetate decarboxylase, gamma chain FEE38_17240 PF00364 Biotin-requiring enzyme FEE38_17240 PF02436 Conserved carboxylase domain FEE38_17240 PF00682 HMGL-like FEE38_17245 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FEE38_17250 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FEE38_17255 PF13180 PDZ domain FEE38_17260 PF13180 PDZ domain FEE38_17260 PF00595 PDZ domain FEE38_17265 PF06295 Protein of unknown function (DUF1043) FEE38_17270 PF03969 AFG1-like ATPase FEE38_17275 PF00572 Ribosomal protein L13 FEE38_17280 PF00380 Ribosomal protein S9/S16 FEE38_17290 PF02798 Glutathione S-transferase, N-terminal domain FEE38_17290 PF00043 Glutathione S-transferase, C-terminal domain FEE38_17295 PF04386 Stringent starvation protein B FEE38_17300 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FEE38_17305 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FEE38_17305 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_17310 PF04898 Glutamate synthase central domain FEE38_17310 PF00310 Glutamine amidotransferases class-II FEE38_17310 PF01493 GXGXG motif FEE38_17310 PF01645 Conserved region in glutamate synthase FEE38_17315 PF16199 Radical_SAM C-terminal domain FEE38_17315 PF04055 Radical SAM superfamily FEE38_17320 PF07690 Major Facilitator Superfamily FEE38_17325 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_17325 PF00107 Zinc-binding dehydrogenase FEE38_17330 PF03786 D-mannonate dehydratase (UxuA) FEE38_17335 PF00989 PAS fold FEE38_17335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_17335 PF00512 His Kinase A (phospho-acceptor) domain FEE38_17335 PF01627 Hpt domain FEE38_17335 PF00072 Response regulator receiver domain FEE38_17335 PF18415 Histidine kinase receptor ArcB trans-membrane domain FEE38_17345 PF00912 Transglycosylase FEE38_17350 PF00381 PTS HPr component phosphorylation site FEE38_17355 PF03668 P-loop ATPase protein family FEE38_17360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_17365 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FEE38_17370 PF04963 Sigma-54 factor, core binding domain FEE38_17370 PF04552 Sigma-54, DNA binding domain FEE38_17370 PF00309 Sigma-54 factor, Activator interacting domain (AID) FEE38_17375 PF00005 ABC transporter FEE38_17375 PF12399 Branched-chain amino acid ATP-binding cassette transporter FEE38_17380 PF03968 OstA-like protein FEE38_17385 PF06835 Lipopolysaccharide-assembly, LptC-related FEE38_17395 PF01380 SIS domain FEE38_17395 PF00571 CBS domain FEE38_17400 PF01699 Sodium/calcium exchanger protein FEE38_17410 PF00005 ABC transporter FEE38_17415 PF02405 Permease MlaE FEE38_17420 PF02470 MlaD protein FEE38_17425 PF05494 MlaC protein FEE38_17430 PF13466 STAS domain FEE38_17435 PF01722 BolA-like protein FEE38_17440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FEE38_17445 PF13693 Winged helix-turn-helix DNA-binding FEE38_17450 PF00348 Polyprenyl synthetase FEE38_17455 PF00829 Ribosomal prokaryotic L21 protein FEE38_17460 PF01016 Ribosomal L27 protein FEE38_17465 PF00892 EamA-like transporter family FEE38_17470 PF01018 GTP1/OBG FEE38_17470 PF01926 50S ribosome-binding GTPase FEE38_17475 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FEE38_17480 PF01272 Transcription elongation factor, GreA/GreB, C-term FEE38_17480 PF03449 Transcription elongation factor, N-terminal FEE38_17485 PF01985 CRS1 / YhbY (CRM) domain FEE38_17490 PF01728 FtsJ-like methyltransferase FEE38_17495 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_17495 PF17862 AAA+ lid domain FEE38_17495 PF06480 FtsH Extracellular FEE38_17495 PF01434 Peptidase family M41 FEE38_17500 PF00809 Pterin binding enzyme FEE38_17505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FEE38_17505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FEE38_17505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FEE38_17505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FEE38_17510 PF03840 Preprotein translocase SecG subunit FEE38_17525 PF07437 YfaZ precursor FEE38_17530 PF15977 Winged helix-turn-helix DNA binding FEE38_17535 PF00764 Arginosuccinate synthase FEE38_17545 PF02576 RimP N-terminal domain FEE38_17545 PF17384 RimP C-terminal SH3 domain FEE38_17550 PF00575 S1 RNA binding domain FEE38_17550 PF13184 NusA-like KH domain FEE38_17550 PF08529 NusA N-terminal domain FEE38_17555 PF08364 Bacterial translation initiation factor IF-2 associated region FEE38_17555 PF04760 Translation initiation factor IF-2, N-terminal region FEE38_17555 PF11987 Translation-initiation factor 2 FEE38_17555 PF00009 Elongation factor Tu GTP binding domain FEE38_17560 PF02033 Ribosome-binding factor A FEE38_17565 PF16198 tRNA pseudouridylate synthase B C-terminal domain FEE38_17565 PF01509 TruB family pseudouridylate synthase (N terminal domain) FEE38_17565 PF09157 Pseudouridine synthase II TruB, C-terminal FEE38_17570 PF00312 Ribosomal protein S15 FEE38_17575 PF00013 KH domain FEE38_17575 PF00575 S1 RNA binding domain FEE38_17575 PF03725 3' exoribonuclease family, domain 2 FEE38_17575 PF01138 3' exoribonuclease family, domain 1 FEE38_17575 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FEE38_17580 PF13181 Tetratricopeptide repeat FEE38_17580 PF07719 Tetratricopeptide repeat FEE38_17590 PF00270 DEAD/DEAH box helicase FEE38_17590 PF12343 Cold shock protein DEAD box A FEE38_17590 PF03880 DbpA RNA binding domain FEE38_17590 PF00271 Helicase conserved C-terminal domain FEE38_17595 PF03222 Tryptophan/tyrosine permease family FEE38_17600 PF00296 Luciferase-like monooxygenase FEE38_17605 PF01136 Peptidase family U32 FEE38_17610 PF01136 Peptidase family U32 FEE38_17615 PF02036 SCP-2 sterol transfer family FEE38_17620 PF13508 Acetyltransferase (GNAT) domain FEE38_17625 PF01541 GIY-YIG catalytic domain FEE38_17635 PF01965 DJ-1/PfpI family FEE38_17640 PF13460 NAD(P)H-binding FEE38_17645 PF03773 Predicted permease FEE38_17650 PF04972 BON domain FEE38_17655 PF13580 SIS domain FEE38_17660 PF02021 Uncharacterised protein family UPF0102 FEE38_17665 PF04348 LppC putative lipoprotein FEE38_17670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_17675 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FEE38_17675 PF08666 SAF domain FEE38_17680 PF07690 Major Facilitator Superfamily FEE38_17685 PF03328 HpcH/HpaI aldolase/citrate lyase family FEE38_17690 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FEE38_17690 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FEE38_17695 PF02595 Glycerate kinase family FEE38_17715 PF17954 Quercetinase C-terminal cupin domain FEE38_17715 PF02678 Pirin FEE38_17720 PF03466 LysR substrate binding domain FEE38_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_17725 PF05656 Protein of unknown function (DUF805) FEE38_17730 PF13409 Glutathione S-transferase, N-terminal domain FEE38_17735 PF07681 DoxX FEE38_17740 PF13997 YqjK-like protein FEE38_17745 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FEE38_17750 PF05957 Bacterial protein of unknown function (DUF883) FEE38_17755 PF06476 Protein of unknown function (DUF1090) FEE38_17760 PF13721 SecD export protein N-terminal TM region FEE38_17765 PF09335 SNARE associated Golgi protein FEE38_17770 PF00392 Bacterial regulatory proteins, gntR family FEE38_17770 PF07729 FCD domain FEE38_17775 PF07690 Major Facilitator Superfamily FEE38_17780 PF02614 Glucuronate isomerase FEE38_17785 PF08666 SAF domain FEE38_17785 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FEE38_17790 PF10688 Bacterial inner membrane protein FEE38_17795 PF00375 Sodium:dicarboxylate symporter family FEE38_17800 PF03741 Integral membrane protein TerC family FEE38_17805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_17810 PF01863 Protein of unknown function DUF45 FEE38_17825 PF05175 Methyltransferase small domain FEE38_17830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FEE38_17830 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_17835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_17835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_17840 PF04198 Putative sugar-binding domain FEE38_17845 PF00005 ABC transporter FEE38_17850 PF02653 Branched-chain amino acid transport system / permease component FEE38_17855 PF02653 Branched-chain amino acid transport system / permease component FEE38_17860 PF13407 Periplasmic binding protein domain FEE38_17865 PF01791 DeoC/LacD family aldolase FEE38_17870 PF03992 Antibiotic biosynthesis monooxygenase FEE38_17875 PF00202 Aminotransferase class-III FEE38_17880 PF03551 Transcriptional regulator PadR-like family FEE38_17885 PF08021 Siderophore-interacting FAD-binding domain FEE38_17885 PF04954 Siderophore-interacting protein FEE38_17890 PF02733 Dak1 domain FEE38_17890 PF02734 DAK2 domain FEE38_17895 PF03610 PTS system fructose IIA component FEE38_17895 PF00381 PTS HPr component phosphorylation site FEE38_17895 PF05524 PEP-utilising enzyme, N-terminal FEE38_17895 PF00391 PEP-utilising enzyme, mobile domain FEE38_17900 PF02734 DAK2 domain FEE38_17905 PF02733 Dak1 domain FEE38_17920 PF00465 Iron-containing alcohol dehydrogenase FEE38_17925 PF00989 PAS fold FEE38_17925 PF02954 Bacterial regulatory protein, Fis family FEE38_17925 PF00158 Sigma-54 interaction domain FEE38_17930 PF01923 Cobalamin adenosyltransferase FEE38_17935 PF02288 Dehydratase medium subunit FEE38_17940 PF00465 Iron-containing alcohol dehydrogenase FEE38_17945 PF03928 Haem-degrading FEE38_17950 PF13737 Transposase DDE domain FEE38_17960 PF02286 Dehydratase large subunit FEE38_17965 PF02288 Dehydratase medium subunit FEE38_17970 PF02287 Dehydratase small subunit FEE38_17975 PF18427 DD-reactivating factor swiveling domain FEE38_17975 PF08841 Diol dehydratase reactivase ATPase-like domain FEE38_17980 PF00230 Major intrinsic protein FEE38_17985 PF06411 HdeA/HdeB family FEE38_17990 PF03729 Short repeat of unknown function (DUF308) FEE38_17995 PF10938 YfdX protein FEE38_18005 PF00072 Response regulator receiver domain FEE38_18005 PF00196 Bacterial regulatory proteins, luxR family FEE38_18025 PF03167 Uracil DNA glycosylase superfamily FEE38_18030 PF04545 Sigma-70, region 4 FEE38_18030 PF04546 Sigma-70, non-essential region FEE38_18030 PF03979 Sigma-70 factor, region 1.1 FEE38_18030 PF00140 Sigma-70 factor, region 1.2 FEE38_18030 PF04542 Sigma-70 region 2 FEE38_18030 PF04539 Sigma-70 region 3 FEE38_18035 PF08278 DNA primase DnaG DnaB-binding FEE38_18035 PF10410 DnaB-helicase binding domain of primase FEE38_18035 PF08275 DNA primase catalytic core, N-terminal domain FEE38_18035 PF01807 CHC2 zinc finger FEE38_18040 PF01165 Ribosomal protein S21 FEE38_18045 PF00814 Glycoprotease family FEE38_18055 PF02492 CobW/HypB/UreG, nucleotide-binding domain FEE38_18060 PF01730 UreF FEE38_18065 PF02814 UreE urease accessory protein, N-terminal domain FEE38_18065 PF05194 UreE urease accessory protein, C-terminal domain FEE38_18070 PF01979 Amidohydrolase family FEE38_18070 PF00449 Urease alpha-subunit, N-terminal domain FEE38_18075 PF00699 Urease beta subunit FEE38_18080 PF00547 Urease, gamma subunit FEE38_18085 PF01774 UreD urease accessory protein FEE38_18095 PF02660 Glycerol-3-phosphate acyltransferase FEE38_18100 PF02152 Dihydroneopterin aldolase FEE38_18105 PF02673 Bacitracin resistance protein BacA FEE38_18110 PF01743 Poly A polymerase head domain FEE38_18110 PF12627 Probable RNA and SrmB- binding site of polymerase A FEE38_18110 PF01966 HD domain FEE38_18115 PF08239 Bacterial SH3 domain FEE38_18120 PF01928 CYTH domain FEE38_18125 PF08335 GlnD PII-uridylyltransferase FEE38_18125 PF03710 Glutamate-ammonia ligase adenylyltransferase FEE38_18130 PF00294 pfkB family carbohydrate kinase FEE38_18130 PF01467 Cytidylyltransferase-like FEE38_18135 PF08971 Glycogen synthesis protein FEE38_18140 PF04380 Membrane fusogenic activity FEE38_18145 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FEE38_18150 PF02535 ZIP Zinc transporter FEE38_18155 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FEE38_18160 PF03738 Glutathionylspermidine synthase preATP-grasp FEE38_18165 PF06693 Protein of unknown function (DUF1190) FEE38_18170 PF02321 Outer membrane efflux protein FEE38_18175 PF00293 NUDIX domain FEE38_18180 PF06853 Protein of unknown function (DUF1249) FEE38_18185 PF00149 Calcineurin-like phosphoesterase FEE38_18190 PF05728 Uncharacterised protein family (UPF0227) FEE38_18195 PF00986 DNA gyrase B subunit, carboxyl terminus FEE38_18195 PF00204 DNA gyrase B FEE38_18195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_18195 PF01751 Toprim domain FEE38_18200 PF03992 Antibiotic biosynthesis monooxygenase FEE38_18205 PF02525 Flavodoxin-like fold FEE38_18210 PF00512 His Kinase A (phospho-acceptor) domain FEE38_18210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_18210 PF08521 Two-component sensor kinase N-terminal FEE38_18215 PF00486 Transcriptional regulatory protein, C terminal FEE38_18215 PF00072 Response regulator receiver domain FEE38_18220 PF04076 Bacterial OB fold (BOF) protein FEE38_18225 PF06445 GyrI-like small molecule binding domain FEE38_18230 PF03989 DNA gyrase C-terminal domain, beta-propeller FEE38_18230 PF00521 DNA gyrase/topoisomerase IV, subunit A FEE38_18235 PF01553 Acyltransferase FEE38_18240 PF07732 Multicopper oxidase FEE38_18240 PF00394 Multicopper oxidase FEE38_18240 PF07731 Multicopper oxidase FEE38_18245 PF04055 Radical SAM superfamily FEE38_18245 PF08497 Radical SAM N-terminal FEE38_18245 PF11842 Domain of unknown function (DUF3362) FEE38_18255 PF00248 Aldo/keto reductase family FEE38_18260 PF00465 Iron-containing alcohol dehydrogenase FEE38_18265 PF06719 AraC-type transcriptional regulator N-terminus FEE38_18265 PF12833 Helix-turn-helix domain FEE38_18270 PF09335 SNARE associated Golgi protein FEE38_18275 PF01053 Cys/Met metabolism PLP-dependent enzyme FEE38_18280 PF01618 MotA/TolQ/ExbB proton channel family FEE38_18285 PF02472 Biopolymer transport protein ExbD/TolR FEE38_18295 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FEE38_18295 PF04616 Glycosyl hydrolases family 43 FEE38_18300 PF03350 Uncharacterized protein family, UPF0114 FEE38_18305 PF01738 Dienelactone hydrolase family FEE38_18310 PF11115 Protein of unknown function (DUF2623) FEE38_18315 PF02798 Glutathione S-transferase, N-terminal domain FEE38_18325 PF05257 CHAP domain FEE38_18325 PF03738 Glutathionylspermidine synthase preATP-grasp FEE38_18330 PF00155 Aminotransferase class I and II FEE38_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_18350 PF03466 LysR substrate binding domain FEE38_18355 PF01053 Cys/Met metabolism PLP-dependent enzyme FEE38_18370 PF04474 Protein of unknown function (DUF554) FEE38_18380 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FEE38_18380 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FEE38_18380 PF01276 Orn/Lys/Arg decarboxylase, major domain FEE38_18385 PF03825 Nucleoside H+ symporter FEE38_18390 PF01464 Transglycosylase SLT domain FEE38_18390 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FEE38_18395 PF04362 Bacterial Fe(2+) trafficking FEE38_18400 PF00730 HhH-GPD superfamily base excision DNA repair protein FEE38_18400 PF14815 NUDIX domain FEE38_18400 PF00633 Helix-hairpin-helix motif FEE38_18400 PF10576 Iron-sulfur binding domain of endonuclease III FEE38_18405 PF02390 Putative methyltransferase FEE38_18410 PF04320 Protein with unknown function (DUF469) FEE38_18415 PF11101 Protein of unknown function (DUF2884) FEE38_18420 PF04055 Radical SAM superfamily FEE38_18420 PF06969 HemN C-terminal domain FEE38_18425 PF01725 Ham1 family FEE38_18430 PF02594 Uncharacterised ACR, YggU family COG1872 FEE38_18435 PF02325 YGGT family FEE38_18440 PF01168 Alanine racemase, N-terminal domain FEE38_18445 PF00437 Type II/IV secretion system protein FEE38_18450 PF00196 Bacterial regulatory proteins, luxR family FEE38_18455 PF03652 Holliday junction resolvase FEE38_18460 PF02622 Uncharacterized ACR, COG1678 FEE38_18465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FEE38_18465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FEE38_18470 PF04452 RNA methyltransferase FEE38_18475 PF04231 Endonuclease I FEE38_18480 PF17283 SprT-like zinc ribbon domain FEE38_18480 PF10263 SprT-like family FEE38_18485 PF00083 Sugar (and other) transporter FEE38_18490 PF00438 S-adenosylmethionine synthetase, N-terminal domain FEE38_18490 PF02773 S-adenosylmethionine synthetase, C-terminal domain FEE38_18490 PF02772 S-adenosylmethionine synthetase, central domain FEE38_18500 PF17944 Arginine decarboxylase C-terminal helical extension FEE38_18500 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FEE38_18500 PF17810 Arginine decarboxylase helical bundle domain FEE38_18505 PF00491 Arginase family FEE38_18520 PF00355 Rieske [2Fe-2S] domain FEE38_18530 PF00355 Rieske [2Fe-2S] domain FEE38_18540 PF09339 IclR helix-turn-helix domain FEE38_18540 PF01614 Bacterial transcriptional regulator FEE38_18550 PF14759 Reductase C-terminal FEE38_18550 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_18565 PF12697 Alpha/beta hydrolase family FEE38_18575 PF03447 Homoserine dehydrogenase, NAD binding domain FEE38_18575 PF01958 Domain of unknown function DUF108 FEE38_18580 PF00171 Aldehyde dehydrogenase family FEE38_18585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_18585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_18585 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_18590 PF03573 outer membrane porin, OprD family FEE38_18595 PF01435 Peptidase family M48 FEE38_18600 PF02779 Transketolase, pyrimidine binding domain FEE38_18600 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_18600 PF02780 Transketolase, C-terminal domain FEE38_18605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FEE38_18605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FEE38_18610 PF00162 Phosphoglycerate kinase FEE38_18615 PF01116 Fructose-bisphosphate aldolase class-II FEE38_18620 PF00924 Mechanosensitive ion channel FEE38_18620 PF05552 Conserved TM helix FEE38_18625 PF01810 LysE type translocator FEE38_18630 PF04402 Protein of unknown function (DUF541) FEE38_18635 PF03466 LysR substrate binding domain FEE38_18635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_18640 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FEE38_18645 PF01842 ACT domain FEE38_18645 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_18645 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_18650 PF01812 5-formyltetrahydrofolate cyclo-ligase family FEE38_18660 PF05164 Cell division protein ZapA FEE38_18665 PF03695 Uncharacterised protein family (UPF0149) FEE38_18670 PF05195 Aminopeptidase P, N-terminal domain FEE38_18670 PF00557 Metallopeptidase family M24 FEE38_18675 PF01494 FAD binding domain FEE38_18680 PF01494 FAD binding domain FEE38_18685 PF01571 Aminomethyltransferase folate-binding domain FEE38_18685 PF08669 Glycine cleavage T-protein C-terminal barrel domain FEE38_18690 PF01597 Glycine cleavage H-protein FEE38_18695 PF02347 Glycine cleavage system P-protein FEE38_18710 PF00578 AhpC/TSA family FEE38_18730 PF00232 Glycosyl hydrolase family 1 FEE38_18735 PF01380 SIS domain FEE38_18735 PF01418 Helix-turn-helix domain, rpiR family FEE38_18745 PF03006 Haemolysin-III related FEE38_18750 PF01571 Aminomethyltransferase folate-binding domain FEE38_18755 PF03937 Flavinator of succinate dehydrogenase FEE38_18760 PF07254 Membrane-bound toxin component of toxin-antitoxin system FEE38_18765 PF00258 Flavodoxin FEE38_18770 PF02899 Phage integrase, N-terminal SAM-like domain FEE38_18770 PF00589 Phage integrase family FEE38_18775 PF13098 Thioredoxin-like domain FEE38_18775 PF10411 Disulfide bond isomerase protein N-terminus FEE38_18780 PF02272 DHHA1 domain FEE38_18780 PF17768 RecJ OB domain FEE38_18780 PF01368 DHH family FEE38_18790 PF00152 tRNA synthetases class II (D, K and N) FEE38_18790 PF01336 OB-fold nucleic acid binding domain FEE38_18795 PF00293 NUDIX domain FEE38_18800 PF01476 LysM domain FEE38_18800 PF01551 Peptidase family M23 FEE38_18810 PF07690 Major Facilitator Superfamily FEE38_18815 PF03466 LysR substrate binding domain FEE38_18815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_18825 PF00248 Aldo/keto reductase family FEE38_18830 PF02525 Flavodoxin-like fold FEE38_18840 PF03466 LysR substrate binding domain FEE38_18840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_18860 PF01022 Bacterial regulatory protein, arsR family FEE38_18865 PF02040 Arsenical pump membrane protein FEE38_18870 PF03960 ArsC family FEE38_18875 PF00854 POT family FEE38_18880 PF08986 Domain of unknown function (DUF1889) FEE38_18885 PF02321 Outer membrane efflux protein FEE38_18890 PF04632 Fusaric acid resistance protein family FEE38_18895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_18895 PF00529 HlyD membrane-fusion protein of T1SS FEE38_18900 PF17090 Uncharacterised protein family FEE38_18905 PF06902 Divergent 4Fe-4S mono-cluster FEE38_18910 PF14542 GCN5-related N-acetyl-transferase FEE38_18920 PF09160 FimH, mannose binding FEE38_18920 PF00419 Fimbrial protein FEE38_18930 PF00419 Fimbrial protein FEE38_18935 PF13954 PapC N-terminal domain FEE38_18935 PF13953 PapC C-terminal domain FEE38_18935 PF00577 Outer membrane usher protein FEE38_18940 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_18940 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_18945 PF00419 Fimbrial protein FEE38_18950 PF00419 Fimbrial protein FEE38_18955 PF00589 Phage integrase family FEE38_18960 PF00589 Phage integrase family FEE38_18970 PF03824 High-affinity nickel-transport protein FEE38_18975 PF01047 MarR family FEE38_18980 PF00892 EamA-like transporter family FEE38_18990 PF00419 Fimbrial protein FEE38_18995 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_18995 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_19000 PF00577 Outer membrane usher protein FEE38_19000 PF13953 PapC C-terminal domain FEE38_19000 PF13954 PapC N-terminal domain FEE38_19005 PF00419 Fimbrial protein FEE38_19020 PF00072 Response regulator receiver domain FEE38_19020 PF00196 Bacterial regulatory proteins, luxR family FEE38_19030 PF00248 Aldo/keto reductase family FEE38_19035 PF03222 Tryptophan/tyrosine permease family FEE38_19045 PF03466 LysR substrate binding domain FEE38_19045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_19050 PF02803 Thiolase, C-terminal domain FEE38_19050 PF00108 Thiolase, N-terminal domain FEE38_19055 PF06178 Oligogalacturonate-specific porin protein (KdgM) FEE38_19060 PF14583 Oligogalacturonate lyase FEE38_19070 PF00083 Sugar (and other) transporter FEE38_19075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_19075 PF00356 Bacterial regulatory proteins, lacI family FEE38_19080 PF01306 LacY proton/sugar symporter FEE38_19085 PF08244 Glycosyl hydrolases family 32 C terminal FEE38_19085 PF00251 Glycosyl hydrolases family 32 N-terminal domain FEE38_19100 PF17912 MalK OB fold domain FEE38_19100 PF00005 ABC transporter FEE38_19105 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_19110 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_19115 PF16867 Dimethlysulfonioproprionate lyase FEE38_19120 PF01177 Asp/Glu/Hydantoin racemase FEE38_19125 PF03466 LysR substrate binding domain FEE38_19125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_19130 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FEE38_19130 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FEE38_19135 PF00356 Bacterial regulatory proteins, lacI family FEE38_19140 PF02378 Phosphotransferase system, EIIC FEE38_19145 PF00232 Glycosyl hydrolase family 1 FEE38_19150 PF00392 Bacterial regulatory proteins, gntR family FEE38_19150 PF07729 FCD domain FEE38_19160 PF00356 Bacterial regulatory proteins, lacI family FEE38_19165 PF01553 Acyltransferase FEE38_19165 PF00501 AMP-binding enzyme FEE38_19170 PF07690 Major Facilitator Superfamily FEE38_19175 PF00248 Aldo/keto reductase family FEE38_19180 PF06004 Bacterial protein of unknown function (DUF903) FEE38_19185 PF03741 Integral membrane protein TerC family FEE38_19190 PF02976 DNA mismatch repair enzyme MutH FEE38_19200 PF00293 NUDIX domain FEE38_19205 PF02896 PEP-utilising enzyme, TIM barrel domain FEE38_19205 PF00391 PEP-utilising enzyme, mobile domain FEE38_19205 PF05524 PEP-utilising enzyme, N-terminal FEE38_19205 PF01590 GAF domain FEE38_19210 PF01790 Prolipoprotein diacylglyceryl transferase FEE38_19215 PF00303 Thymidylate synthase FEE38_19220 PF07963 Prokaryotic N-terminal methylation motif FEE38_19225 PF07963 Prokaryotic N-terminal methylation motif FEE38_19230 PF10713 Protein of unknown function (DUF2509) FEE38_19235 PF12528 Type II secretion prepilin peptidase dependent protein C FEE38_19235 PF07963 Prokaryotic N-terminal methylation motif FEE38_19240 PF17946 RecC C-terminal domain FEE38_19245 PF00675 Insulinase (Peptidase family M16) FEE38_19245 PF05193 Peptidase M16 inactive domain FEE38_19245 PF16187 Middle or third domain of peptidase_M16 FEE38_19250 PF00580 UvrD/REP helicase N-terminal domain FEE38_19250 PF12705 PD-(D/E)XK nuclease superfamily FEE38_19250 PF13361 UvrD-like helicase C-terminal domain FEE38_19255 PF13538 UvrD-like helicase C-terminal domain FEE38_19265 PF00696 Amino acid kinase family FEE38_19265 PF00583 Acetyltransferase (GNAT) family FEE38_19270 PF11741 AMIN domain FEE38_19270 PF01520 N-acetylmuramoyl-L-alanine amidase FEE38_19275 PF00155 Aminotransferase class I and II FEE38_19280 PF00288 GHMP kinases N terminal domain FEE38_19285 PF00871 Acetokinase family FEE38_19290 PF10662 Ethanolamine utilisation - propanediol utilisation FEE38_19295 PF00936 BMC domain FEE38_19305 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FEE38_19305 PF13237 4Fe-4S dicluster domain FEE38_19305 PF13375 RnfC Barrel sandwich hybrid domain FEE38_19305 PF10531 SLBB domain FEE38_19310 PF00171 Aldehyde dehydrogenase family FEE38_19310 PF00465 Iron-containing alcohol dehydrogenase FEE38_19315 PF00171 Aldehyde dehydrogenase family FEE38_19320 PF01923 Cobalamin adenosyltransferase FEE38_19325 PF03319 Ethanolamine utilisation protein EutN/carboxysome FEE38_19335 PF06130 Phosphate propanoyltransferase FEE38_19345 PF00936 BMC domain FEE38_19355 PF08841 Diol dehydratase reactivase ATPase-like domain FEE38_19355 PF18427 DD-reactivating factor swiveling domain FEE38_19360 PF02287 Dehydratase small subunit FEE38_19365 PF02288 Dehydratase medium subunit FEE38_19375 PF00936 BMC domain FEE38_19380 PF00936 BMC domain FEE38_19385 PF00230 Major intrinsic protein FEE38_19390 PF10114 Sensory domain found in PocR FEE38_19390 PF12833 Helix-turn-helix domain FEE38_19395 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FEE38_19395 PF07685 CobB/CobQ-like glutamine amidotransferase domain FEE38_19400 PF03186 CobD/Cbib protein FEE38_19405 PF02570 Precorrin-8X methylmutase FEE38_19410 PF01888 CbiD FEE38_19415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_19420 PF05175 Methyltransferase small domain FEE38_19425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_19430 PF11760 Cobalamin synthesis G N-terminal FEE38_19430 PF11761 Cobalamin biosynthesis central region FEE38_19430 PF01890 Cobalamin synthesis G C-terminus FEE38_19435 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_19440 PF02571 Precorrin-6x reductase CbiJ/CobK FEE38_19445 PF06180 Cobalt chelatase (CbiK) FEE38_19450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_19455 PF01891 Cobalt uptake substrate-specific transmembrane region FEE38_19460 PF02553 Cobalt transport protein component CbiN FEE38_19465 PF02361 Cobalt transport protein FEE38_19470 PF00005 ABC transporter FEE38_19475 PF07685 CobB/CobQ-like glutamine amidotransferase domain FEE38_19480 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FEE38_19485 PF02277 Phosphoribosyltransferase FEE38_19525 PF13737 Transposase DDE domain FEE38_19540 PF13488 Glycine zipper FEE38_19540 PF00691 OmpA family FEE38_19575 PF03562 MltA specific insert domain FEE38_19575 PF06725 3D domain FEE38_19580 PF00899 ThiF family FEE38_19585 PF02657 Fe-S metabolism associated domain FEE38_19590 PF00266 Aminotransferase class-V FEE38_19595 PF06004 Bacterial protein of unknown function (DUF903) FEE38_19600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_19600 PF03466 LysR substrate binding domain FEE38_19605 PF04241 Protein of unknown function (DUF423) FEE38_19610 PF01728 FtsJ-like methyltransferase FEE38_19610 PF18125 RlmM ferredoxin-like domain FEE38_19615 PF00455 DeoR C terminal sensor domain FEE38_19615 PF08220 DeoR-like helix-turn-helix domain FEE38_19620 PF05025 RbsD / FucU transport protein family FEE38_19625 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FEE38_19625 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FEE38_19630 PF07881 L-fucose isomerase, first N-terminal domain FEE38_19630 PF07882 L-fucose isomerase, second N-terminal domain FEE38_19630 PF02952 L-fucose isomerase, C-terminal domain FEE38_19635 PF07690 Major Facilitator Superfamily FEE38_19640 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_19645 PF00465 Iron-containing alcohol dehydrogenase FEE38_19650 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FEE38_19650 PF01367 5'-3' exonuclease, C-terminal SAM fold FEE38_19655 PF00158 Sigma-54 interaction domain FEE38_19660 PF00296 Luciferase-like monooxygenase FEE38_19670 PF00296 Luciferase-like monooxygenase FEE38_19675 PF00005 ABC transporter FEE38_19680 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_19685 PF03180 NLPA lipoprotein FEE38_19705 PF13737 Transposase DDE domain FEE38_19720 PF09084 NMT1/THI5 like FEE38_19725 PF03315 Serine dehydratase beta chain FEE38_19725 PF03313 Serine dehydratase alpha chain FEE38_19735 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FEE38_19735 PF03641 Possible lysine decarboxylase FEE38_19735 PF11892 Domain of unknown function (DUF3412) FEE38_19740 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FEE38_19740 PF14489 QueF-like protein FEE38_19745 PF07348 Syd protein (SUKH-2) FEE38_19750 PF04287 tRNA pseudouridine synthase C FEE38_19755 PF00849 RNA pseudouridylate synthase FEE38_19760 PF00258 Flavodoxin FEE38_19765 PF07690 Major Facilitator Superfamily FEE38_19770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FEE38_19770 PF13378 Enolase C-terminal domain-like FEE38_19775 PF13378 Enolase C-terminal domain-like FEE38_19780 PF02595 Glycerate kinase family FEE38_19790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_19790 PF00072 Response regulator receiver domain FEE38_19790 PF00512 His Kinase A (phospho-acceptor) domain FEE38_19790 PF00672 HAMP domain FEE38_19790 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FEE38_19790 PF01627 Hpt domain FEE38_19795 PF05958 tRNA (Uracil-5-)-methyltransferase FEE38_19795 PF01938 TRAM domain FEE38_19800 PF04607 Region found in RelA / SpoT proteins FEE38_19800 PF13291 ACT domain FEE38_19800 PF02824 TGS domain FEE38_19805 PF03819 MazG nucleotide pyrophosphohydrolase domain FEE38_19810 PF00117 Glutamine amidotransferase class-I FEE38_19810 PF06418 CTP synthase N-terminus FEE38_19815 PF03952 Enolase, N-terminal domain FEE38_19815 PF00113 Enolase, C-terminal TIM barrel domain FEE38_19825 PF04055 Radical SAM superfamily FEE38_19830 PF01242 6-pyruvoyl tetrahydropterin synthase FEE38_19835 PF00667 FAD binding domain FEE38_19835 PF00258 Flavodoxin FEE38_19835 PF00175 Oxidoreductase NAD-binding domain FEE38_19840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FEE38_19840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FEE38_19845 PF01507 Phosphoadenosine phosphosulfate reductase family FEE38_19850 PF04389 Peptidase family M28 FEE38_19855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FEE38_19855 PF14824 Sirohaem biosynthesis protein central FEE38_19855 PF10414 Sirohaem synthase dimerisation region FEE38_19860 PF01507 Phosphoadenosine phosphosulfate reductase family FEE38_19865 PF00009 Elongation factor Tu GTP binding domain FEE38_19875 PF12084 Protein of unknown function (DUF3561) FEE38_19880 PF04977 Septum formation initiator FEE38_19885 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FEE38_19890 PF02542 YgbB family FEE38_19895 PF01142 tRNA pseudouridine synthase D (TruD) FEE38_19900 PF01975 Survival protein SurE FEE38_19910 PF01476 LysM domain FEE38_19910 PF01551 Peptidase family M23 FEE38_19915 PF00140 Sigma-70 factor, region 1.2 FEE38_19915 PF04542 Sigma-70 region 2 FEE38_19915 PF04539 Sigma-70 region 3 FEE38_19915 PF04545 Sigma-70, region 4 FEE38_19925 PF07690 Major Facilitator Superfamily FEE38_19930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_19930 PF03466 LysR substrate binding domain FEE38_19935 PF01047 MarR family FEE38_19940 PF02441 Flavoprotein FEE38_19945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FEE38_19960 PF01848 Hok/gef family FEE38_19965 PF01624 MutS domain I FEE38_19965 PF00488 MutS domain V FEE38_19965 PF05190 MutS family domain IV FEE38_19965 PF05188 MutS domain II FEE38_19965 PF05192 MutS domain III FEE38_19970 PF00005 ABC transporter FEE38_19975 PF01032 FecCD transport family FEE38_19980 PF01497 Periplasmic binding protein FEE38_19985 PF05171 Haemin-degrading HemS.ChuX domain FEE38_19990 PF07715 TonB-dependent Receptor Plug Domain FEE38_19990 PF00593 TonB dependent receptor FEE38_20000 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_20000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_20000 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_20005 PF03547 Membrane transport protein FEE38_20015 PF11756 Nitrous oxide-stimulated promoter FEE38_20020 PF00950 ABC 3 transport family FEE38_20025 PF00950 ABC 3 transport family FEE38_20030 PF00005 ABC transporter FEE38_20035 PF01297 Zinc-uptake complex component A periplasmic FEE38_20040 PF00356 Bacterial regulatory proteins, lacI family FEE38_20045 PF00480 ROK family FEE38_20050 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FEE38_20055 PF02378 Phosphotransferase system, EIIC FEE38_20060 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_20065 PF02378 Phosphotransferase system, EIIC FEE38_20085 PF00232 Glycosyl hydrolase family 1 FEE38_20090 PF01590 GAF domain FEE38_20090 PF02954 Bacterial regulatory protein, Fis family FEE38_20090 PF00158 Sigma-54 interaction domain FEE38_20095 PF00586 AIR synthase related protein, N-terminal domain FEE38_20095 PF02769 AIR synthase related protein, C-terminal domain FEE38_20100 PF01924 Hydrogenase formation hypA family FEE38_20105 PF01455 HupF/HypC family FEE38_20110 PF02492 CobW/HypB/UreG, nucleotide-binding domain FEE38_20115 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FEE38_20120 PF11046 Transcriptional repressor of hyc and hyp operons FEE38_20130 PF13247 4Fe-4S dicluster domain FEE38_20135 PF00361 Proton-conducting membrane transporter FEE38_20140 PF00146 NADH dehydrogenase FEE38_20145 PF00374 Nickel-dependent hydrogenase FEE38_20145 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FEE38_20145 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FEE38_20150 PF12838 4Fe-4S dicluster domain FEE38_20155 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FEE38_20160 PF07450 Formate hydrogenlyase maturation protein HycH FEE38_20165 PF01750 Hydrogenase maturation protease FEE38_20170 PF08845 Toxin SymE, type I toxin-antitoxin system FEE38_20175 PF00232 Glycosyl hydrolase family 1 FEE38_20180 PF00367 phosphotransferase system, EIIB FEE38_20180 PF02378 Phosphotransferase system, EIIC FEE38_20185 PF00356 Bacterial regulatory proteins, lacI family FEE38_20190 PF12800 4Fe-4S binding domain FEE38_20190 PF13247 4Fe-4S dicluster domain FEE38_20195 PF17788 HypF Kae1-like domain FEE38_20195 PF00708 Acylphosphatase FEE38_20195 PF07503 HypF finger FEE38_20195 PF01300 Telomere recombination FEE38_20200 PF03824 High-affinity nickel-transport protein FEE38_20205 PF18113 Rubredoxin binding C-terminal domain FEE38_20205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_20210 PF00258 Flavodoxin FEE38_20210 PF00753 Metallo-beta-lactamase superfamily FEE38_20210 PF00301 Rubredoxin FEE38_20220 PF00158 Sigma-54 interaction domain FEE38_20220 PF01590 GAF domain FEE38_20225 PF00571 CBS domain FEE38_20225 PF01380 SIS domain FEE38_20230 PF00455 DeoR C terminal sensor domain FEE38_20230 PF08220 DeoR-like helix-turn-helix domain FEE38_20235 PF06923 Glucitol operon activator protein (GutM) FEE38_20240 PF00106 short chain dehydrogenase FEE38_20245 PF03829 PTS system glucitol/sorbitol-specific IIA component FEE38_20250 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FEE38_20250 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FEE38_20255 PF03608 PTS system enzyme II sorbitol-specific factor FEE38_20260 PF13406 Transglycosylase SLT domain FEE38_20270 PF00005 ABC transporter FEE38_20275 PF00950 ABC 3 transport family FEE38_20280 PF01297 Zinc-uptake complex component A periplasmic FEE38_20285 PF02464 Competence-damaged protein FEE38_20290 PF00154 recA bacterial DNA recombination protein FEE38_20295 PF02631 RecX family FEE38_20300 PF01411 tRNA synthetases class II (A) FEE38_20300 PF02272 DHHA1 domain FEE38_20300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FEE38_20310 PF02599 Global regulator protein family FEE38_20340 PF04972 BON domain FEE38_20345 PF13419 Haloacid dehalogenase-like hydrolase FEE38_20350 PF09335 SNARE associated Golgi protein FEE38_20355 PF04262 Glutamate-cysteine ligase FEE38_20360 PF02664 S-Ribosylhomocysteinase (LuxS) FEE38_20365 PF12852 Cupin FEE38_20365 PF12833 Helix-turn-helix domain FEE38_20370 PF08502 LeuA allosteric (dimerisation) domain FEE38_20370 PF00682 HMGL-like FEE38_20375 PF07690 Major Facilitator Superfamily FEE38_20380 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_20380 PF00529 HlyD membrane-fusion protein of T1SS FEE38_20385 PF01047 MarR family FEE38_20390 PF05437 Branched-chain amino acid transport protein (AzlD) FEE38_20395 PF03591 AzlC protein FEE38_20400 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FEE38_20405 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_20410 PF00005 ABC transporter FEE38_20410 PF00571 CBS domain FEE38_20415 PF00268 Ribonucleotide reductase, small chain FEE38_20420 PF08343 Ribonucleotide reductase N-terminal FEE38_20420 PF00317 Ribonucleotide reductase, all-alpha domain FEE38_20420 PF02867 Ribonucleotide reductase, barrel domain FEE38_20425 PF07972 NrdI Flavodoxin like FEE38_20430 PF00462 Glutaredoxin FEE38_20435 PF02627 Carboxymuconolactone decarboxylase family FEE38_20440 PF00392 Bacterial regulatory proteins, gntR family FEE38_20440 PF00155 Aminotransferase class I and II FEE38_20445 PF05957 Bacterial protein of unknown function (DUF883) FEE38_20450 PF09400 Protein of unknown function (DUF2002) FEE38_20455 PF06610 L-alanine exporter FEE38_20470 PF00816 H-NS histone family FEE38_20485 PF00581 Rhodanese-like domain FEE38_20485 PF11127 Protein of unknown function (DUF2892) FEE38_20490 PF01022 Bacterial regulatory protein, arsR family FEE38_20495 PF02525 Flavodoxin-like fold FEE38_20500 PF03466 LysR substrate binding domain FEE38_20500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_20505 PF02954 Bacterial regulatory protein, Fis family FEE38_20505 PF00158 Sigma-54 interaction domain FEE38_20505 PF01590 GAF domain FEE38_20515 PF16970 Type-1 fimbrial protein, A FEE38_20520 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_20520 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_20525 PF13954 PapC N-terminal domain FEE38_20525 PF00577 Outer membrane usher protein FEE38_20525 PF13953 PapC C-terminal domain FEE38_20540 PF13953 PapC C-terminal domain FEE38_20540 PF00577 Outer membrane usher protein FEE38_20540 PF13954 PapC N-terminal domain FEE38_20545 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_20545 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_20550 PF00419 Fimbrial protein FEE38_20555 PF00072 Response regulator receiver domain FEE38_20555 PF00196 Bacterial regulatory proteins, luxR family FEE38_20570 PF00106 short chain dehydrogenase FEE38_20575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_20580 PF00596 Class II Aldolase and Adducin N-terminal domain FEE38_20585 PF00005 ABC transporter FEE38_20590 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_20605 PF00491 Arginase family FEE38_20610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_20610 PF03466 LysR substrate binding domain FEE38_20620 PF00873 AcrB/AcrD/AcrF family FEE38_20630 PF12833 Helix-turn-helix domain FEE38_20630 PF06445 GyrI-like small molecule binding domain FEE38_20640 PF03466 LysR substrate binding domain FEE38_20640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_20675 PF13356 Arm DNA-binding domain FEE38_20675 PF00589 Phage integrase family FEE38_20685 PF01668 SmpB protein FEE38_20690 PF03364 Polyketide cyclase / dehydrase and lipid transport FEE38_20695 PF03658 RnfH family Ubiquitin FEE38_20700 PF04355 SmpA / OmlA family FEE38_20705 PF02463 RecF/RecN/SMC N terminal domain FEE38_20710 PF01513 ATP-NAD kinase FEE38_20715 PF01025 GrpE FEE38_20720 PF03471 Transporter associated domain FEE38_20720 PF01595 Cyclin M transmembrane N-terminal domain FEE38_20720 PF00571 CBS domain FEE38_20725 PF01578 Cytochrome C assembly protein FEE38_20730 PF02978 Signal peptide binding domain FEE38_20730 PF00448 SRP54-type protein, GTPase domain FEE38_20730 PF02881 SRP54-type protein, helical bundle domain FEE38_20735 PF00886 Ribosomal protein S16 FEE38_20740 PF01782 RimM N-terminal domain FEE38_20740 PF05239 PRC-barrel domain FEE38_20745 PF01746 tRNA (Guanine-1)-methyltransferase FEE38_20750 PF01245 Ribosomal protein L19 FEE38_20765 PF00691 OmpA family FEE38_20770 PF17152 Periplasmic sensor domain FEE38_20770 PF00990 Diguanylate cyclase, GGDEF domain FEE38_20775 PF13689 YfiR/HmsC-like FEE38_20780 PF00793 DAHP synthetase I family FEE38_20785 PF02153 Prephenate dehydrogenase FEE38_20785 PF01817 Chorismate mutase type II FEE38_20790 PF08450 SMP-30/Gluconolactonase/LRE-like region FEE38_20795 PF01817 Chorismate mutase type II FEE38_20795 PF00800 Prephenate dehydratase FEE38_20805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FEE38_20810 PF13525 Outer membrane lipoprotein FEE38_20815 PF01479 S4 domain FEE38_20815 PF00849 RNA pseudouridylate synthase FEE38_20825 PF17871 AAA lid domain FEE38_20825 PF07724 AAA domain (Cdc48 subfamily) FEE38_20825 PF02861 Clp amino terminal domain, pathogenicity island component FEE38_20825 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_20825 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_20860 PF00083 Sugar (and other) transporter FEE38_20865 PF10043 Predicted periplasmic lipoprotein (DUF2279) FEE38_20870 PF13091 PLD-like domain FEE38_20875 PF00583 Acetyltransferase (GNAT) family FEE38_20875 PF13380 CoA binding domain FEE38_20875 PF13607 Succinyl-CoA ligase like flavodoxin domain FEE38_20885 PF00085 Thioredoxin FEE38_20890 PF00588 SpoU rRNA Methylase family FEE38_20890 PF08032 RNA 2'-O ribose methyltransferase substrate binding FEE38_20895 PF03167 Uracil DNA glycosylase superfamily FEE38_20900 PF01228 Glycine radical FEE38_20905 PF00271 Helicase conserved C-terminal domain FEE38_20905 PF00270 DEAD/DEAH box helicase FEE38_20910 PF05175 Methyltransferase small domain FEE38_20915 PF02910 Fumarate reductase flavoprotein C-term FEE38_20915 PF00890 FAD binding domain FEE38_20925 PF08281 Sigma-70, region 4 FEE38_20925 PF04542 Sigma-70 region 2 FEE38_20930 PF03873 Anti sigma-E protein RseA, C-terminal domain FEE38_20930 PF03872 Anti sigma-E protein RseA, N-terminal domain FEE38_20935 PF03888 MucB/RseB N-terminal domain FEE38_20935 PF17188 MucB/RseB C-terminal domain FEE38_20945 PF06421 GTP-binding protein LepA C-terminus FEE38_20945 PF03144 Elongation factor Tu domain 2 FEE38_20945 PF00009 Elongation factor Tu GTP binding domain FEE38_20945 PF00679 Elongation factor G C-terminus FEE38_20950 PF10502 Signal peptidase, peptidase S26 FEE38_20955 PF00035 Double-stranded RNA binding motif FEE38_20955 PF14622 Ribonuclease-III-like FEE38_20960 PF01926 50S ribosome-binding GTPase FEE38_20960 PF07650 KH domain FEE38_20965 PF02565 Recombination protein O C terminal FEE38_20965 PF11967 Recombination protein O N terminal FEE38_20970 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FEE38_20975 PF01648 4'-phosphopantetheinyl transferase superfamily FEE38_20980 PF12838 4Fe-4S dicluster domain FEE38_20985 PF01380 SIS domain FEE38_20985 PF01418 Helix-turn-helix domain, rpiR family FEE38_20995 PF14437 MafB19-like deaminase FEE38_21000 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_21000 PF01464 Transglycosylase SLT domain FEE38_21005 PF02769 AIR synthase related protein, C-terminal domain FEE38_21005 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FEE38_21005 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FEE38_21015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_21015 PF00512 His Kinase A (phospho-acceptor) domain FEE38_21020 PF13942 YfhG lipoprotein FEE38_21025 PF00072 Response regulator receiver domain FEE38_21025 PF00158 Sigma-54 interaction domain FEE38_21030 PF00543 Nitrogen regulatory protein P-II FEE38_21035 PF00175 Oxidoreductase NAD-binding domain FEE38_21035 PF00970 Oxidoreductase FAD-binding domain FEE38_21035 PF00042 Globin FEE38_21040 PF00464 Serine hydroxymethyltransferase FEE38_21045 PF07681 DoxX FEE38_21050 PF00480 ROK family FEE38_21055 PF13181 Tetratricopeptide repeat FEE38_21055 PF17128 Domain of unknown function (DUF5107) FEE38_21060 PF00083 Sugar (and other) transporter FEE38_21065 PF01263 Aldose 1-epimerase FEE38_21070 PF12832 MFS_1 like family FEE38_21075 PF00874 PRD domain FEE38_21080 PF06226 Protein of unknown function (DUF1007) FEE38_21085 PF03824 High-affinity nickel-transport protein FEE38_21095 PF00459 Inositol monophosphatase family FEE38_21100 PF00588 SpoU rRNA Methylase family FEE38_21105 PF02082 Transcriptional regulator FEE38_21110 PF00266 Aminotransferase class-V FEE38_21115 PF01592 NifU-like N terminal domain FEE38_21120 PF01521 Iron-sulphur cluster biosynthesis FEE38_21125 PF07743 HSCB C-terminal oligomerisation domain FEE38_21125 PF00226 DnaJ domain FEE38_21130 PF00012 Hsp70 protein FEE38_21135 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_21140 PF04384 Iron-sulphur cluster assembly FEE38_21145 PF00883 Cytosol aminopeptidase family, catalytic domain FEE38_21145 PF12404 Peptidase FEE38_21150 PF07179 SseB protein N-terminal domain FEE38_21150 PF14581 SseB protein C-terminal domain FEE38_21160 PF00581 Rhodanese-like domain FEE38_21165 PF17962 Bacterial macroglobulin domain 6 FEE38_21165 PF07703 Alpha-2-macroglobulin bait region domain FEE38_21165 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FEE38_21165 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FEE38_21165 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FEE38_21165 PF07678 A-macroglobulin TED domain FEE38_21165 PF01835 MG2 domain FEE38_21165 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FEE38_21165 PF00207 Alpha-2-macroglobulin family FEE38_21170 PF00905 Penicillin binding protein transpeptidase domain FEE38_21170 PF06832 Penicillin-Binding Protein C-terminus Family FEE38_21170 PF00912 Transglycosylase FEE38_21175 PF00334 Nucleoside diphosphate kinase FEE38_21185 PF04055 Radical SAM superfamily FEE38_21190 PF13464 Domain of unknown function (DUF4115) FEE38_21195 PF04551 GcpE protein FEE38_21200 PF13393 Histidyl-tRNA synthetase FEE38_21200 PF03129 Anticodon binding domain FEE38_21205 PF09976 Tetratricopeptide repeat-like domain FEE38_21210 PF13360 PQQ-like domain FEE38_21215 PF01926 50S ribosome-binding GTPase FEE38_21215 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FEE38_21225 PF07191 zinc-ribbons FEE38_21230 PF13742 OB-fold nucleic acid binding domain FEE38_21230 PF02601 Exonuclease VII, large subunit FEE38_21235 PF00478 IMP dehydrogenase / GMP reductase domain FEE38_21235 PF00571 CBS domain FEE38_21240 PF00958 GMP synthase C terminal domain FEE38_21240 PF00117 Glutamine amidotransferase class-I FEE38_21240 PF02540 NAD synthase FEE38_21280 PF03837 RecT family FEE38_21365 PF00717 Peptidase S24-like FEE38_21370 PF03592 Terminase small subunit FEE38_21370 PF10668 Phage terminase small subunit FEE38_21515 PF00182 Chitinase class I FEE38_21525 PF00884 Sulfatase FEE38_21530 PF13186 Iron-sulfur cluster-binding domain FEE38_21530 PF04055 Radical SAM superfamily FEE38_21540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_21540 PF03466 LysR substrate binding domain FEE38_21545 PF11119 Protein of unknown function (DUF2633) FEE38_21550 PF00563 EAL domain FEE38_21550 PF05231 MASE1 FEE38_21555 PF02541 Ppx/GppA phosphatase family FEE38_21560 PF13090 Polyphosphate kinase C-terminal domain 2 FEE38_21560 PF17941 Polyphosphate kinase C-terminal domain 1 FEE38_21560 PF13089 Polyphosphate kinase N-terminal domain FEE38_21560 PF02503 Polyphosphate kinase middle domain FEE38_21565 PF00551 Formyl transferase FEE38_21570 PF00586 AIR synthase related protein, N-terminal domain FEE38_21570 PF02769 AIR synthase related protein, C-terminal domain FEE38_21575 PF00480 ROK family FEE38_21580 PF00232 Glycosyl hydrolase family 1 FEE38_21590 PF00860 Permease family FEE38_21595 PF00308 Bacterial dnaA protein FEE38_21600 PF04754 Putative transposase, YhgA-like FEE38_21605 PF03960 ArsC family FEE38_21610 PF01435 Peptidase family M48 FEE38_21615 PF01594 AI-2E family transporter FEE38_21620 PF00578 AhpC/TSA family FEE38_21625 PF01842 ACT domain FEE38_21630 PF00701 Dihydrodipicolinate synthetase family FEE38_21635 PF06804 NlpB/DapX lipoprotein FEE38_21640 PF01259 SAICAR synthetase FEE38_21645 PF04228 Putative neutral zinc metallopeptidase FEE38_21650 PF17176 tRNA-binding domain FEE38_21650 PF13718 GNAT acetyltransferase 2 FEE38_21650 PF08351 Domain of unknown function (DUF1726) FEE38_21650 PF05127 Helicase FEE38_21655 PF02230 Phospholipase/Carboxylesterase FEE38_21660 PF13980 Uncharacterised protein family (UPF0370) FEE38_21665 PF07687 Peptidase dimerisation domain FEE38_21665 PF01546 Peptidase family M20/M25/M40 FEE38_21670 PF03960 ArsC family FEE38_21680 PF00873 AcrB/AcrD/AcrF family FEE38_21690 PF13247 4Fe-4S dicluster domain FEE38_21690 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_21690 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FEE38_21695 PF00293 NUDIX domain FEE38_21700 PF06674 Protein of unknown function (DUF1176) FEE38_21705 PF00456 Transketolase, thiamine diphosphate binding domain FEE38_21705 PF02779 Transketolase, pyrimidine binding domain FEE38_21705 PF02780 Transketolase, C-terminal domain FEE38_21710 PF00923 Transaldolase/Fructose-6-phosphate aldolase FEE38_21715 PF01515 Phosphate acetyl/butaryl transferase FEE38_21715 PF00390 Malic enzyme, N-terminal domain FEE38_21715 PF03949 Malic enzyme, NAD binding domain FEE38_21720 PF00936 BMC domain FEE38_21725 PF10662 Ethanolamine utilisation - propanediol utilisation FEE38_21730 PF06249 Ethanolamine utilisation protein EutQ FEE38_21735 PF01923 Cobalamin adenosyltransferase FEE38_21740 PF01515 Phosphate acetyl/butaryl transferase FEE38_21745 PF00936 BMC domain FEE38_21750 PF03319 Ethanolamine utilisation protein EutN/carboxysome FEE38_21755 PF00171 Aldehyde dehydrogenase family FEE38_21780 PF04346 Ethanolamine utilisation protein, EutH FEE38_21785 PF06277 Ethanolamine utilisation protein EutA FEE38_21790 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FEE38_21795 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FEE38_21800 PF00936 BMC domain FEE38_21805 PF00936 BMC domain FEE38_21805 PF16365 Ethanolamine utilization protein EutK C-terminus FEE38_21810 PF12833 Helix-turn-helix domain FEE38_21815 PF01218 Coproporphyrinogen III oxidase FEE38_21820 PF01520 N-acetylmuramoyl-L-alanine amidase FEE38_21825 PF00583 Acetyltransferase (GNAT) family FEE38_21830 PF11143 Protein of unknown function (DUF2919) FEE38_21835 PF06572 Protein of unknown function (DUF1131) FEE38_21840 PF04261 Dyp-type peroxidase family FEE38_21855 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_21860 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_21865 PF00005 ABC transporter FEE38_21870 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_21875 PF13474 SnoaL-like domain FEE38_21880 PF00155 Aminotransferase class I and II FEE38_21880 PF00392 Bacterial regulatory proteins, gntR family FEE38_21885 PF08543 Phosphomethylpyrimidine kinase FEE38_21895 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FEE38_21900 PF00391 PEP-utilising enzyme, mobile domain FEE38_21900 PF05524 PEP-utilising enzyme, N-terminal FEE38_21900 PF02896 PEP-utilising enzyme, TIM barrel domain FEE38_21905 PF00381 PTS HPr component phosphorylation site FEE38_21910 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_21920 PF04354 ZipA, C-terminal FtsZ-binding domain FEE38_21925 PF01653 NAD-dependent DNA ligase adenylation domain FEE38_21925 PF12826 Helix-hairpin-helix motif FEE38_21925 PF00533 BRCA1 C Terminus (BRCT) domain FEE38_21925 PF03120 NAD-dependent DNA ligase OB-fold domain FEE38_21925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FEE38_21930 PF12843 Putative quorum-sensing-regulated virulence factor FEE38_21935 PF13593 SBF-like CPA transporter family (DUF4137) FEE38_21940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_21940 PF03466 LysR substrate binding domain FEE38_21965 PF00749 tRNA synthetases class I (E and Q), catalytic domain FEE38_21970 PF07037 Putative transcription regulator (DUF1323) FEE38_21975 PF07037 Putative transcription regulator (DUF1323) FEE38_21990 PF05231 MASE1 FEE38_21990 PF00563 EAL domain FEE38_21995 PF01773 Na+ dependent nucleoside transporter N-terminus FEE38_21995 PF07670 Nucleoside recognition FEE38_21995 PF07662 Na+ dependent nucleoside transporter C-terminus FEE38_22000 PF01566 Natural resistance-associated macrophage protein FEE38_22005 PF10697 Protein of unknown function (DUF2502) FEE38_22010 PF00248 Aldo/keto reductase family FEE38_22015 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_22015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_22015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_22020 PF00654 Voltage gated chloride channel FEE38_22025 PF02685 Glucokinase FEE38_22030 PF00072 Response regulator receiver domain FEE38_22030 PF04397 LytTr DNA-binding domain FEE38_22035 PF06580 Histidine kinase FEE38_22035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_22035 PF07694 5TMR of 5TMR-LYT FEE38_22045 PF00155 Aminotransferase class I and II FEE38_22055 PF07690 Major Facilitator Superfamily FEE38_22060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FEE38_22065 PF03466 LysR substrate binding domain FEE38_22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_22085 PF01609 Transposase DDE domain FEE38_22085 PF05598 Transposase domain (DUF772) FEE38_22155 PF00589 Phage integrase family FEE38_22155 PF13356 Arm DNA-binding domain FEE38_22165 PF01226 Formate/nitrite transporter FEE38_22170 PF04333 MlaA lipoprotein FEE38_22175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FEE38_22180 PF04175 Protein of unknown function (DUF406) FEE38_22185 PF02803 Thiolase, C-terminal domain FEE38_22185 PF00108 Thiolase, N-terminal domain FEE38_22190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FEE38_22190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FEE38_22190 PF00378 Enoyl-CoA hydratase/isomerase FEE38_22195 PF00300 Histidine phosphatase superfamily (branch 1) FEE38_22200 PF01713 Smr domain FEE38_22205 PF05175 Methyltransferase small domain FEE38_22210 PF01264 Chorismate synthase FEE38_22215 PF03411 Penicillin-insensitive murein endopeptidase FEE38_22220 PF01925 Sulfite exporter TauE/SafE FEE38_22225 PF04315 Elongation factor P hydroxylase FEE38_22230 PF08891 YfcL protein FEE38_22235 PF01266 FAD dependent oxidoreductase FEE38_22235 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FEE38_22240 PF00109 Beta-ketoacyl synthase, N-terminal domain FEE38_22240 PF02801 Beta-ketoacyl synthase, C-terminal domain FEE38_22245 PF07690 Major Facilitator Superfamily FEE38_22255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FEE38_22255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FEE38_22255 PF11890 Domain of unknown function (DUF3410) FEE38_22260 PF02774 Semialdehyde dehydrogenase, dimerisation domain FEE38_22260 PF01118 Semialdehyde dehydrogenase, NAD binding domain FEE38_22265 PF01416 tRNA pseudouridine synthase FEE38_22270 PF09335 SNARE associated Golgi protein FEE38_22275 PF17848 Acetyl-coA carboxylase zinc finger domain FEE38_22275 PF01039 Carboxyl transferase domain FEE38_22280 PF08245 Mur ligase middle domain FEE38_22280 PF02875 Mur ligase family, glutamate ligase domain FEE38_22285 PF05036 Sporulation related domain FEE38_22290 PF02674 Colicin V production protein FEE38_22295 PF00156 Phosphoribosyl transferase domain FEE38_22300 PF02441 Flavoprotein FEE38_22305 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_22310 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_22315 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22320 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22325 PF00005 ABC transporter FEE38_22330 PF13302 Acetyltransferase (GNAT) domain FEE38_22335 PF01370 NAD dependent epimerase/dehydratase family FEE38_22335 PF08338 Domain of unknown function (DUF1731) FEE38_22340 PF02152 Dihydroneopterin aldolase FEE38_22345 PF02798 Glutathione S-transferase, N-terminal domain FEE38_22345 PF00043 Glutathione S-transferase, C-terminal domain FEE38_22350 PF02798 Glutathione S-transferase, N-terminal domain FEE38_22350 PF14834 Glutathione S-transferase, C-terminal domain FEE38_22355 PF12850 Calcineurin-like phosphoesterase superfamily domain FEE38_22360 PF00293 NUDIX domain FEE38_22365 PF01515 Phosphate acetyl/butaryl transferase FEE38_22365 PF07085 DRTGG domain FEE38_22370 PF00871 Acetokinase family FEE38_22375 PF04217 Protein of unknown function, DUF412 FEE38_22380 PF03887 YfbU domain FEE38_22385 PF13419 Haloacid dehalogenase-like hydrolase FEE38_22390 PF02080 TrkA-C domain FEE38_22390 PF03600 Citrate transporter FEE38_22400 PF00155 Aminotransferase class I and II FEE38_22405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_22405 PF03466 LysR substrate binding domain FEE38_22415 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FEE38_22420 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FEE38_22425 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FEE38_22425 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FEE38_22435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FEE38_22435 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FEE38_22435 PF10531 SLBB domain FEE38_22440 PF00384 Molybdopterin oxidoreductase FEE38_22440 PF01568 Molydopterin dinucleotide binding domain FEE38_22440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FEE38_22440 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FEE38_22445 PF00146 NADH dehydrogenase FEE38_22450 PF12838 4Fe-4S dicluster domain FEE38_22455 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FEE38_22460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FEE38_22465 PF00361 Proton-conducting membrane transporter FEE38_22465 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FEE38_22470 PF00361 Proton-conducting membrane transporter FEE38_22475 PF00361 Proton-conducting membrane transporter FEE38_22480 PF12706 Beta-lactamase superfamily domain FEE38_22485 PF13673 Acetyltransferase (GNAT) domain FEE38_22490 PF00425 chorismate binding enzyme FEE38_22495 PF16582 Middle domain of thiamine pyrophosphate FEE38_22495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_22495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_22500 PF12697 Alpha/beta hydrolase family FEE38_22505 PF00378 Enoyl-CoA hydratase/isomerase FEE38_22510 PF13378 Enolase C-terminal domain-like FEE38_22515 PF13193 AMP-binding enzyme C-terminal domain FEE38_22515 PF00501 AMP-binding enzyme FEE38_22520 PF00293 NUDIX domain FEE38_22525 PF04754 Putative transposase, YhgA-like FEE38_22530 PF07437 YfaZ precursor FEE38_22535 PF00994 Probable molybdopterin binding domain FEE38_22540 PF01614 Bacterial transcriptional regulator FEE38_22540 PF09339 IclR helix-turn-helix domain FEE38_22545 PF13378 Enolase C-terminal domain-like FEE38_22545 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FEE38_22550 PF07690 Major Facilitator Superfamily FEE38_22555 PF03328 HpcH/HpaI aldolase/citrate lyase family FEE38_22560 PF02754 Cysteine-rich domain FEE38_22560 PF13183 4Fe-4S dicluster domain FEE38_22565 PF00890 FAD binding domain FEE38_22570 PF04324 BFD-like [2Fe-2S] binding domain FEE38_22570 PF01266 FAD dependent oxidoreductase FEE38_22575 PF07690 Major Facilitator Superfamily FEE38_22580 PF03009 Glycerophosphoryl diester phosphodiesterase family FEE38_22585 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_22590 PF00268 Ribonucleotide reductase, small chain FEE38_22595 PF00317 Ribonucleotide reductase, all-alpha domain FEE38_22595 PF02867 Ribonucleotide reductase, barrel domain FEE38_22595 PF03477 ATP cone domain FEE38_22605 PF00521 DNA gyrase/topoisomerase IV, subunit A FEE38_22605 PF03989 DNA gyrase C-terminal domain, beta-propeller FEE38_22610 PF00072 Response regulator receiver domain FEE38_22610 PF09456 RcsC Alpha-Beta-Loop (ABL) FEE38_22610 PF00512 His Kinase A (phospho-acceptor) domain FEE38_22610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_22615 PF00196 Bacterial regulatory proteins, luxR family FEE38_22615 PF00072 Response regulator receiver domain FEE38_22620 PF16359 RcsD-ABL domain FEE38_22620 PF01627 Hpt domain FEE38_22620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_22625 PF00267 Gram-negative porin FEE38_22630 PF02424 ApbE family FEE38_22640 PF13532 2OG-Fe(II) oxygenase superfamily FEE38_22645 PF00005 ABC transporter FEE38_22650 PF01769 Divalent cation transporter FEE38_22650 PF00571 CBS domain FEE38_22650 PF03448 MgtE intracellular N domain FEE38_22655 PF00916 Sulfate permease family FEE38_22655 PF01740 STAS domain FEE38_22660 PF06039 Malate:quinone oxidoreductase (Mqo) FEE38_22665 PF03974 Ecotin FEE38_22670 PF01594 AI-2E family transporter FEE38_22680 PF00884 Sulfatase FEE38_22680 PF11893 Domain of unknown function (DUF3413) FEE38_22685 PF07208 Protein of unknown function (DUF1414) FEE38_22690 PF04245 37-kD nucleoid-associated bacterial protein FEE38_22695 PF08220 DeoR-like helix-turn-helix domain FEE38_22695 PF00455 DeoR C terminal sensor domain FEE38_22700 PF00293 NUDIX domain FEE38_22705 PF00144 Beta-lactamase FEE38_22715 PF01386 Ribosomal L25p family FEE38_22720 PF00271 Helicase conserved C-terminal domain FEE38_22720 PF04851 Type III restriction enzyme, res subunit FEE38_22725 PF01479 S4 domain FEE38_22725 PF00849 RNA pseudouridylate synthase FEE38_22730 PF07690 Major Facilitator Superfamily FEE38_22735 PF13989 YejG-like protein FEE38_22740 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_22740 PF00005 ABC transporter FEE38_22745 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22745 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_22750 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_22760 PF12792 CSS motif domain associated with EAL FEE38_22760 PF00563 EAL domain FEE38_22765 PF00877 NlpC/P60 family FEE38_22770 PF01569 PAP2 superfamily FEE38_22775 PF02492 CobW/HypB/UreG, nucleotide-binding domain FEE38_22775 PF07683 Cobalamin synthesis protein cobW C-terminal domain FEE38_22780 PF08125 Mannitol dehydrogenase C-terminal domain FEE38_22780 PF01232 Mannitol dehydrogenase Rossmann domain FEE38_22785 PF03786 D-mannonate dehydratase (UxuA) FEE38_22790 PF01132 Elongation factor P (EF-P) OB domain FEE38_22790 PF09285 Elongation factor P, C-terminal FEE38_22790 PF08207 Elongation factor P (EF-P) KOW-like domain FEE38_22795 PF03692 Putative zinc- or iron-chelating domain FEE38_22800 PF07690 Major Facilitator Superfamily FEE38_22805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FEE38_22805 PF00381 PTS HPr component phosphorylation site FEE38_22810 PF00294 pfkB family carbohydrate kinase FEE38_22815 PF02378 Phosphotransferase system, EIIC FEE38_22815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FEE38_22820 PF01261 Xylose isomerase-like TIM barrel FEE38_22825 PF03601 Conserved hypothetical protein 698 FEE38_22830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_22830 PF03466 LysR substrate binding domain FEE38_22835 PF00324 Amino acid permease FEE38_22845 PF00756 Putative esterase FEE38_22850 PF01227 GTP cyclohydrolase I FEE38_22855 PF04235 Protein of unknown function (DUF418) FEE38_22860 PF00356 Bacterial regulatory proteins, lacI family FEE38_22865 PF13407 Periplasmic binding protein domain FEE38_22870 PF00005 ABC transporter FEE38_22875 PF02653 Branched-chain amino acid transport system / permease component FEE38_22880 PF02698 DUF218 domain FEE38_22885 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FEE38_22885 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FEE38_22890 PF04172 LrgB-like family FEE38_22895 PF03788 LrgA family FEE38_22900 PF01207 Dihydrouridine synthase (Dus) FEE38_22905 PF04966 Carbohydrate-selective porin, OprB family FEE38_22910 PF00874 PRD domain FEE38_22910 PF03123 CAT RNA binding domain FEE38_22915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FEE38_22915 PF02378 Phosphotransferase system, EIIC FEE38_22915 PF00367 phosphotransferase system, EIIB FEE38_22920 PF00232 Glycosyl hydrolase family 1 FEE38_22930 PF02321 Outer membrane efflux protein FEE38_22935 PF09335 SNARE associated Golgi protein FEE38_22940 PF04893 Yip1 domain FEE38_22945 PF00768 D-alanyl-D-alanine carboxypeptidase FEE38_22955 PF01565 FAD binding domain FEE38_22955 PF09330 D-lactate dehydrogenase, membrane binding FEE38_22960 PF14310 Fibronectin type III-like domain FEE38_22960 PF00933 Glycosyl hydrolase family 3 N terminal domain FEE38_22960 PF01915 Glycosyl hydrolase family 3 C-terminal domain FEE38_22965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FEE38_22970 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22975 PF00005 ABC transporter FEE38_22980 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_22990 PF06580 Histidine kinase FEE38_22990 PF07694 5TMR of 5TMR-LYT FEE38_22995 PF00072 Response regulator receiver domain FEE38_22995 PF04397 LytTr DNA-binding domain FEE38_23000 PF07308 Protein of unknown function (DUF1456) FEE38_23005 PF09334 tRNA synthetases class I (M) FEE38_23005 PF01588 Putative tRNA binding domain FEE38_23010 PF10609 NUBPL iron-transfer P-loop NTPase FEE38_23020 PF11776 Nickel/cobalt transporter regulator FEE38_23025 PF03466 LysR substrate binding domain FEE38_23025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23030 PF00860 Permease family FEE38_23035 PF01979 Amidohydrolase family FEE38_23035 PF13382 Adenine deaminase C-terminal domain FEE38_23040 PF03466 LysR substrate binding domain FEE38_23040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23050 PF02110 Hydroxyethylthiazole kinase family FEE38_23055 PF08543 Phosphomethylpyrimidine kinase FEE38_23060 PF07702 UTRA domain FEE38_23060 PF00392 Bacterial regulatory proteins, gntR family FEE38_23065 PF00294 pfkB family carbohydrate kinase FEE38_23070 PF03747 ADP-ribosylglycohydrolase FEE38_23075 PF03825 Nucleoside H+ symporter FEE38_23080 PF01791 DeoC/LacD family aldolase FEE38_23090 PF00781 Diacylglycerol kinase catalytic domain FEE38_23100 PF00072 Response regulator receiver domain FEE38_23100 PF00486 Transcriptional regulatory protein, C terminal FEE38_23105 PF00672 HAMP domain FEE38_23105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_23105 PF00512 His Kinase A (phospho-acceptor) domain FEE38_23110 PF07690 Major Facilitator Superfamily FEE38_23115 PF00873 AcrB/AcrD/AcrF family FEE38_23120 PF00873 AcrB/AcrD/AcrF family FEE38_23125 PF13533 Biotin-lipoyl like FEE38_23130 PF00375 Sodium:dicarboxylate symporter family FEE38_23155 PF00012 Hsp70 protein FEE38_23160 PF00730 HhH-GPD superfamily base excision DNA repair protein FEE38_23160 PF06029 AlkA N-terminal domain FEE38_23165 PF00485 Phosphoribulokinase / Uridine kinase family FEE38_23170 PF00692 dUTPase FEE38_23175 PF05170 AsmA family FEE38_23180 PF00571 CBS domain FEE38_23180 PF03471 Transporter associated domain FEE38_23180 PF03741 Integral membrane protein TerC family FEE38_23190 PF00483 Nucleotidyl transferase FEE38_23195 PF01569 PAP2 superfamily FEE38_23200 PF14052 Capsule assembly protein Wzi FEE38_23205 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FEE38_23205 PF10531 SLBB domain FEE38_23205 PF02563 Polysaccharide biosynthesis/export protein FEE38_23210 PF01451 Low molecular weight phosphotyrosine protein phosphatase FEE38_23215 PF13614 AAA domain FEE38_23215 PF02706 Chain length determinant protein FEE38_23215 PF13807 G-rich domain on putative tyrosine kinase FEE38_23220 PF02397 Bacterial sugar transferase FEE38_23225 PF13439 Glycosyltransferase Family 4 FEE38_23225 PF00534 Glycosyl transferases group 1 FEE38_23230 PF13439 Glycosyltransferase Family 4 FEE38_23230 PF00534 Glycosyl transferases group 1 FEE38_23235 PF03023 Lipid II flippase MurJ FEE38_23245 PF13477 Glycosyl transferase 4-like FEE38_23245 PF00534 Glycosyl transferases group 1 FEE38_23265 PF13439 Glycosyltransferase Family 4 FEE38_23265 PF00534 Glycosyl transferases group 1 FEE38_23270 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FEE38_23270 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FEE38_23275 PF00483 Nucleotidyl transferase FEE38_23275 PF01050 Mannose-6-phosphate isomerase FEE38_23280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FEE38_23280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FEE38_23280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FEE38_23280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FEE38_23285 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FEE38_23285 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FEE38_23285 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FEE38_23295 PF01370 NAD dependent epimerase/dehydratase family FEE38_23300 PF01061 ABC-2 type transporter FEE38_23305 PF00005 ABC transporter FEE38_23315 PF03275 UDP-galactopyranose mutase FEE38_23325 PF13439 Glycosyltransferase Family 4 FEE38_23325 PF00534 Glycosyl transferases group 1 FEE38_23330 PF01501 Glycosyl transferase family 8 FEE38_23330 PF00535 Glycosyl transferase family 2 FEE38_23340 PF00535 Glycosyl transferase family 2 FEE38_23350 PF01502 Phosphoribosyl-AMP cyclohydrolase FEE38_23350 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FEE38_23355 PF00977 Histidine biosynthesis protein FEE38_23360 PF00977 Histidine biosynthesis protein FEE38_23365 PF00117 Glutamine amidotransferase class-I FEE38_23370 PF00475 Imidazoleglycerol-phosphate dehydratase FEE38_23370 PF08645 Polynucleotide kinase 3 phosphatase FEE38_23375 PF00155 Aminotransferase class I and II FEE38_23380 PF00815 Histidinol dehydrogenase FEE38_23385 PF01634 ATP phosphoribosyltransferase FEE38_23385 PF08029 HisG, C-terminal domain FEE38_23395 PF01370 NAD dependent epimerase/dehydratase family FEE38_23400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23400 PF03466 LysR substrate binding domain FEE38_23410 PF13520 Amino acid permease FEE38_23415 PF01022 Bacterial regulatory protein, arsR family FEE38_23420 PF00679 Elongation factor G C-terminus FEE38_23420 PF03144 Elongation factor Tu domain 2 FEE38_23420 PF14492 Elongation Factor G, domain II FEE38_23420 PF03764 Elongation factor G, domain IV FEE38_23420 PF00009 Elongation factor Tu GTP binding domain FEE38_23430 PF08411 Exonuclease C-terminal FEE38_23430 PF00929 Exonuclease FEE38_23435 PF07943 Penicillin-binding protein 5, C-terminal domain FEE38_23435 PF00768 D-alanyl-D-alanine carboxypeptidase FEE38_23440 PF06445 GyrI-like small molecule binding domain FEE38_23445 PF04632 Fusaric acid resistance protein family FEE38_23450 PF04363 Protein of unknown function (DUF496) FEE38_23455 PF02654 Cobalamin-5-phosphate synthase FEE38_23460 PF02277 Phosphoribosyltransferase FEE38_23465 PF05221 S-adenosyl-L-homocysteine hydrolase FEE38_23465 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FEE38_23475 PF14552 Tautomerase enzyme FEE38_23480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23480 PF03466 LysR substrate binding domain FEE38_23490 PF07690 Major Facilitator Superfamily FEE38_23490 PF00083 Sugar (and other) transporter FEE38_23505 PF00563 EAL domain FEE38_23505 PF00990 Diguanylate cyclase, GGDEF domain FEE38_23505 PF03707 Bacterial signalling protein N terminal repeat FEE38_23505 PF13188 PAS domain FEE38_23515 PF09313 Domain of unknown function (DUF1971) FEE38_23520 PF08956 Domain of unknown function (DUF1869) FEE38_23525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23525 PF03466 LysR substrate binding domain FEE38_23535 PF00561 alpha/beta hydrolase fold FEE38_23540 PF00990 Diguanylate cyclase, GGDEF domain FEE38_23560 PF01554 MatE FEE38_23570 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FEE38_23570 PF01048 Phosphorylase superfamily FEE38_23580 PF12146 Serine aminopeptidase, S33 FEE38_23590 PF00107 Zinc-binding dehydrogenase FEE38_23590 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_23595 PF00440 Bacterial regulatory proteins, tetR family FEE38_23595 PF16925 Tetracyclin repressor-like, C-terminal domain FEE38_23600 PF00999 Sodium/hydrogen exchanger family FEE38_23610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23610 PF03466 LysR substrate binding domain FEE38_23615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23615 PF03466 LysR substrate binding domain FEE38_23620 PF03734 L,D-transpeptidase catalytic domain FEE38_23620 PF17969 L,D-transpeptidase C-terminal domain FEE38_23630 PF03466 LysR substrate binding domain FEE38_23630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_23640 PF06167 Glucose-regulated metallo-peptidase M90 FEE38_23705 PF00717 Peptidase S24-like FEE38_23705 PF01381 Helix-turn-helix FEE38_23735 PF02086 D12 class N6 adenine-specific DNA methyltransferase FEE38_23740 PF05866 Endodeoxyribonuclease RusA FEE38_23745 PF06147 Protein of unknown function (DUF968) FEE38_23770 PF00182 Chitinase class I FEE38_23815 PF03354 Phage Terminase FEE38_23825 PF04860 Phage portal protein FEE38_23880 PF13974 YebO-like protein FEE38_23930 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FEE38_23940 PF00717 Peptidase S24-like FEE38_23945 PF00267 Gram-negative porin FEE38_23960 PF01966 HD domain FEE38_23965 PF00145 C-5 cytosine-specific DNA methylase FEE38_23965 PF18284 DNA methylase N-terminal domain FEE38_23970 PF03852 DNA mismatch endonuclease Vsr FEE38_23975 PF00892 EamA-like transporter family FEE38_23980 PF05661 Protein of unknown function (DUF808) FEE38_23985 PF17151 Periplasmic sensor domain FEE38_23985 PF00990 Diguanylate cyclase, GGDEF domain FEE38_23990 PF10733 Protein of unknown function (DUF2525) FEE38_23995 PF10781 Dextransucrase DSRB FEE38_24000 PF00196 Bacterial regulatory proteins, luxR family FEE38_24005 PF13987 YedD-like protein FEE38_24010 PF00128 Alpha amylase, catalytic domain FEE38_24010 PF02806 Alpha amylase, C-terminal all-beta domain FEE38_24020 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_24035 PF00196 Bacterial regulatory proteins, luxR family FEE38_24035 PF03472 Autoinducer binding domain FEE38_24040 PF10769 Protein of unknown function (DUF2594) FEE38_24045 PF00196 Bacterial regulatory proteins, luxR family FEE38_24045 PF00072 Response regulator receiver domain FEE38_24050 PF02151 UvrB/uvrC motif FEE38_24050 PF01541 GIY-YIG catalytic domain FEE38_24050 PF08459 UvrC Helix-hairpin-helix N-terminal FEE38_24055 PF01066 CDP-alcohol phosphatidyltransferase FEE38_24075 PF00701 Dihydrodipicolinate synthetase family FEE38_24080 PF03695 Uncharacterised protein family (UPF0149) FEE38_24080 PF02810 SEC-C motif FEE38_24085 PF03222 Tryptophan/tyrosine permease family FEE38_24090 PF10678 Protein of unknown function (DUF2492) FEE38_24095 PF00210 Ferritin-like domain FEE38_24110 PF07690 Major Facilitator Superfamily FEE38_24115 PF10964 Protein of unknown function (DUF2766) FEE38_24130 PF00210 Ferritin-like domain FEE38_24140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FEE38_24145 PF00005 ABC transporter FEE38_24150 PF02653 Branched-chain amino acid transport system / permease component FEE38_24155 PF02358 Trehalose-phosphatase FEE38_24160 PF00982 Glycosyltransferase family 20 FEE38_24165 PF00582 Universal stress protein family FEE38_24175 PF07470 Glycosyl Hydrolase Family 88 FEE38_24180 PF03485 Arginyl tRNA synthetase N terminal domain FEE38_24180 PF00750 tRNA synthetases class I (R) FEE38_24180 PF05746 DALR anticodon binding domain FEE38_24185 PF06185 YecM protein FEE38_24190 PF03932 CutC family FEE38_24195 PF08003 Protein of unknown function (DUF1698) FEE38_24200 PF13649 Methyltransferase domain FEE38_24205 PF01124 MAPEG family FEE38_24210 PF01904 Protein of unknown function DUF72 FEE38_24215 PF00589 Phage integrase family FEE38_24215 PF12167 Arm DNA-binding domain FEE38_24280 PF01381 Helix-turn-helix FEE38_24280 PF00717 Peptidase S24-like FEE38_24350 PF05869 DNA N-6-adenine-methyltransferase (Dam) FEE38_24375 PF00182 Chitinase class I FEE38_24420 PF03354 Phage Terminase FEE38_24430 PF04860 Phage portal protein FEE38_24525 PF00717 Peptidase S24-like FEE38_24530 PF00857 Isochorismatase family FEE38_24535 PF00152 tRNA synthetases class II (D, K and N) FEE38_24535 PF02938 GAD domain FEE38_24535 PF01336 OB-fold nucleic acid binding domain FEE38_24540 PF00293 NUDIX domain FEE38_24545 PF01709 Transcriptional regulator FEE38_24550 PF02075 Crossover junction endodeoxyribonuclease RuvC FEE38_24555 PF01330 RuvA N terminal domain FEE38_24555 PF07499 RuvA, C-terminal domain FEE38_24560 PF17864 RuvB AAA lid domain FEE38_24560 PF05491 RuvB C-terminal winged helix domain FEE38_24560 PF05496 Holliday junction DNA helicase RuvB P-loop domain FEE38_24565 PF00950 ABC 3 transport family FEE38_24570 PF00005 ABC transporter FEE38_24575 PF01297 Zinc-uptake complex component A periplasmic FEE38_24580 PF08525 Opacity-associated protein A N-terminal motif FEE38_24580 PF01476 LysM domain FEE38_24580 PF01551 Peptidase family M23 FEE38_24585 PF03279 Bacterial lipid A biosynthesis acyltransferase FEE38_24590 PF02887 Pyruvate kinase, alpha/beta domain FEE38_24590 PF00224 Pyruvate kinase, barrel domain FEE38_24595 PF01418 Helix-turn-helix domain, rpiR family FEE38_24595 PF01380 SIS domain FEE38_24610 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FEE38_24610 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FEE38_24615 PF00920 Dehydratase family FEE38_24620 PF01081 KDPG and KHG aldolase FEE38_24625 PF02222 ATP-grasp domain FEE38_24630 PF07130 YebG protein FEE38_24635 PF04391 Protein of unknown function (DUF533) FEE38_24640 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FEE38_24640 PF00326 Prolyl oligopeptidase family FEE38_24645 PF00929 Exonuclease FEE38_24650 PF06440 DNA polymerase III, theta subunit FEE38_24655 PF04234 CopC domain FEE38_24660 PF05425 Copper resistance protein D FEE38_24665 PF10709 Protein of unknown function (DUF2511) FEE38_24675 PF04393 Protein of unknown function (DUF535) FEE38_24680 PF00149 Calcineurin-like phosphoesterase FEE38_24685 PF07358 Protein of unknown function (DUF1482) FEE38_24690 PF07351 Protein of unknown function (DUF1480) FEE38_24695 PF01189 16S rRNA methyltransferase RsmB/F FEE38_24695 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FEE38_24695 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FEE38_24700 PF02470 MlaD protein FEE38_24705 PF04403 Paraquat-inducible protein A FEE38_24710 PF13185 GAF domain FEE38_24715 PF17516 ProQ C-terminal domain FEE38_24715 PF04352 ProQ/FINO family FEE38_24720 PF11818 C-terminal domain of tail specific protease (DUF3340) FEE38_24720 PF17804 Tail specific protease N-terminal domain FEE38_24720 PF00595 PDZ domain FEE38_24720 PF03572 Peptidase family S41 FEE38_24725 PF01435 Peptidase family M48 FEE38_24730 PF07690 Major Facilitator Superfamily FEE38_24735 PF09339 IclR helix-turn-helix domain FEE38_24735 PF01614 Bacterial transcriptional regulator FEE38_24740 PF13996 YobH-like protein FEE38_24745 PF13998 MgrB protein FEE38_24750 PF13974 YebO-like protein FEE38_24765 PF10736 Protein of unknown function (DUF2627) FEE38_24770 PF00313 'Cold-shock' DNA-binding domain FEE38_24775 PF00905 Penicillin binding protein transpeptidase domain FEE38_24775 PF03717 Penicillin-binding Protein dimerisation domain FEE38_24780 PF13847 Methyltransferase domain FEE38_24785 PF02659 Putative manganese efflux pump FEE38_24790 PF06173 Protein of unknown function (DUF986) FEE38_24795 PF03613 PTS system mannose/fructose/sorbose family IID component FEE38_24800 PF03609 PTS system sorbose-specific iic component FEE38_24805 PF03610 PTS system fructose IIA component FEE38_24805 PF03830 PTS system sorbose subfamily IIB component FEE38_24810 PF03471 Transporter associated domain FEE38_24810 PF03741 Integral membrane protein TerC family FEE38_24815 PF12792 CSS motif domain associated with EAL FEE38_24815 PF00563 EAL domain FEE38_24820 PF03313 Serine dehydratase alpha chain FEE38_24820 PF03315 Serine dehydratase beta chain FEE38_24825 PF00293 NUDIX domain FEE38_24830 PF04715 Anthranilate synthase component I, N terminal region FEE38_24830 PF00425 chorismate binding enzyme FEE38_24835 PF03701 Uncharacterised protein family (UPF0181) FEE38_24840 PF01042 Endoribonuclease L-PSP FEE38_24845 PF04851 Type III restriction enzyme, res subunit FEE38_24845 PF13307 Helicase C-terminal domain FEE38_24850 PF00814 Glycoprotease family FEE38_24855 PF03843 Outer membrane lipoprotein Slp family FEE38_24860 PF13193 AMP-binding enzyme C-terminal domain FEE38_24860 PF00501 AMP-binding enzyme FEE38_24865 PF00570 HRDC domain FEE38_24865 PF01612 3'-5' exonuclease FEE38_24870 PF03776 Septum formation topological specificity factor MinE FEE38_24875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FEE38_24880 PF03775 Septum formation inhibitor MinC, C-terminal domain FEE38_24880 PF05209 Septum formation inhibitor MinC, N-terminal domain FEE38_24885 PF05166 YcgL domain FEE38_24890 PF01557 Fumarylacetoacetate (FAA) hydrolase family FEE38_24895 PF03692 Putative zinc- or iron-chelating domain FEE38_24905 PF02600 Disulfide bond formation protein DsbB FEE38_24910 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FEE38_24915 PF07840 FadR C-terminal domain FEE38_24915 PF00392 Bacterial regulatory proteins, gntR family FEE38_24920 PF04293 SpoVR like protein FEE38_24925 PF01266 FAD dependent oxidoreductase FEE38_24930 PF00842 Alanine racemase, C-terminal domain FEE38_24930 PF01168 Alanine racemase, N-terminal domain FEE38_24935 PF00999 Sodium/hydrogen exchanger family FEE38_24935 PF02080 TrkA-C domain FEE38_24935 PF03471 Transporter associated domain FEE38_24940 PF17676 LD-carboxypeptidase C-terminal domain FEE38_24940 PF02016 LD-carboxypeptidase N-terminal domain FEE38_24945 PF01464 Transglycosylase SLT domain FEE38_24950 PF00593 TonB dependent receptor FEE38_24950 PF07715 TonB-dependent Receptor Plug Domain FEE38_24955 PF01204 Trehalase FEE38_24965 PF14403 Circularly permuted ATP-grasp type 2 FEE38_25005 PF03466 LysR substrate binding domain FEE38_25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_25010 PF00291 Pyridoxal-phosphate dependent enzyme FEE38_25015 PF03222 Tryptophan/tyrosine permease family FEE38_25020 PF00871 Acetokinase family FEE38_25025 PF02901 Pyruvate formate lyase-like FEE38_25025 PF01228 Glycine radical FEE38_25030 PF13458 Periplasmic binding protein FEE38_25035 PF02653 Branched-chain amino acid transport system / permease component FEE38_25040 PF02653 Branched-chain amino acid transport system / permease component FEE38_25040 PF11862 Domain of unknown function (DUF3382) FEE38_25045 PF12399 Branched-chain amino acid ATP-binding cassette transporter FEE38_25045 PF00005 ABC transporter FEE38_25050 PF00005 ABC transporter FEE38_25055 PF03466 LysR substrate binding domain FEE38_25055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_25060 PF01293 Phosphoenolpyruvate carboxykinase FEE38_25070 PF03466 LysR substrate binding domain FEE38_25070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_25075 PF07690 Major Facilitator Superfamily FEE38_25085 PF03466 LysR substrate binding domain FEE38_25085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_25090 PF12167 Arm DNA-binding domain FEE38_25090 PF00589 Phage integrase family FEE38_25185 PF01695 IstB-like ATP binding protein FEE38_25190 PF03796 DnaB-like helicase C terminal domain FEE38_25190 PF00772 DnaB-like helicase N terminal domain FEE38_25195 PF05866 Endodeoxyribonuclease RusA FEE38_25200 PF03589 Antitermination protein FEE38_25220 PF13007 Transposase C of IS166 homeodomain FEE38_25220 PF13817 IS66 C-terminal element FEE38_25220 PF03050 Transposase IS66 family FEE38_25220 PF13005 zinc-finger binding domain of transposase IS66 FEE38_25225 PF05717 IS66 Orf2 like protein FEE38_25285 PF13737 Transposase DDE domain FEE38_25335 PF02796 Helix-turn-helix domain of resolvase FEE38_25335 PF00239 Resolvase, N terminal domain FEE38_25350 PF00849 RNA pseudouridylate synthase FEE38_25355 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FEE38_25385 PF13488 Glycine zipper FEE38_25385 PF00691 OmpA family FEE38_25390 PF13737 Transposase DDE domain FEE38_25395 PF04717 Type VI secretion system, phage-baseplate injector FEE38_25480 PF13407 Periplasmic binding protein domain FEE38_25490 PF01926 50S ribosome-binding GTPase FEE38_25490 PF06071 Protein of unknown function (DUF933) FEE38_25495 PF01195 Peptidyl-tRNA hydrolase FEE38_25500 PF10762 Protein of unknown function (DUF2583) FEE38_25510 PF00916 Sulfate permease family FEE38_25510 PF01740 STAS domain FEE38_25515 PF14572 Phosphoribosyl synthetase-associated domain FEE38_25515 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FEE38_25520 PF00288 GHMP kinases N terminal domain FEE38_25520 PF08544 GHMP kinases C terminal FEE38_25525 PF03550 Outer membrane lipoprotein LolB FEE38_25530 PF01488 Shikimate / quinate 5-dehydrogenase FEE38_25530 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FEE38_25530 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FEE38_25535 PF03462 PCRF domain FEE38_25535 PF00472 RF-1 domain FEE38_25540 PF17827 PrmC N-terminal domain FEE38_25540 PF13847 Methyltransferase domain FEE38_25545 PF04247 Invasion gene expression up-regulator, SirB FEE38_25550 PF13369 Transglutaminase-like superfamily FEE38_25555 PF00793 DAHP synthetase I family FEE38_25560 PF01699 Sodium/calcium exchanger protein FEE38_25565 PF06150 ChaB FEE38_25570 PF04752 ChaC-like protein FEE38_25580 PF02635 DsrE/DsrF-like family FEE38_25585 PF08376 Nitrate and nitrite sensing FEE38_25585 PF03861 ANTAR domain FEE38_25595 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_25600 PF00005 ABC transporter FEE38_25605 PF18267 Rubredoxin NAD+ reductase C-terminal domain FEE38_25605 PF07992 Pyridine nucleotide-disulphide oxidoreductase FEE38_25605 PF13806 Rieske-like [2Fe-2S] domain FEE38_25605 PF04324 BFD-like [2Fe-2S] binding domain FEE38_25605 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FEE38_25605 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FEE38_25610 PF04324 BFD-like [2Fe-2S] binding domain FEE38_25610 PF01568 Molydopterin dinucleotide binding domain FEE38_25610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FEE38_25610 PF00384 Molybdopterin oxidoreductase FEE38_25615 PF11924 Inverse autotransporter, beta-domain FEE38_25620 PF00072 Response regulator receiver domain FEE38_25620 PF00196 Bacterial regulatory proteins, luxR family FEE38_25625 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FEE38_25625 PF07730 Histidine kinase FEE38_25625 PF00672 HAMP domain FEE38_25625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_25630 PF07690 Major Facilitator Superfamily FEE38_25635 PF01568 Molydopterin dinucleotide binding domain FEE38_25635 PF14710 Respiratory nitrate reductase alpha N-terminal FEE38_25635 PF00384 Molybdopterin oxidoreductase FEE38_25640 PF13247 4Fe-4S dicluster domain FEE38_25640 PF14711 Respiratory nitrate reductase beta C-terminal FEE38_25645 PF02613 Nitrate reductase delta subunit FEE38_25650 PF02665 Nitrate reductase gamma subunit FEE38_25660 PF01037 Lrp/AsnC ligand binding domain FEE38_25695 PF01842 ACT domain FEE38_25695 PF00551 Formyl transferase FEE38_25700 PF02810 SEC-C motif FEE38_25705 PF01734 Patatin-like phospholipase FEE38_25710 PF00072 Response regulator receiver domain FEE38_25715 PF00483 Nucleotidyl transferase FEE38_25720 PF00816 H-NS histone family FEE38_25725 PF00265 Thymidine kinase FEE38_25730 PF00171 Aldehyde dehydrogenase family FEE38_25730 PF00465 Iron-containing alcohol dehydrogenase FEE38_25740 PF01914 MarC family integral membrane protein FEE38_25745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_25750 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_25755 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_25755 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_25760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_25760 PF00005 ABC transporter FEE38_25765 PF00005 ABC transporter FEE38_25765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_25770 PF00520 Ion transport protein FEE38_25770 PF00027 Cyclic nucleotide-binding domain FEE38_25775 PF04269 Protein of unknown function, DUF440 FEE38_25780 PF13396 Phospholipase_D-nuclease N-terminal FEE38_25780 PF13091 PLD-like domain FEE38_25790 PF04264 YceI-like domain FEE38_25800 PF03795 YCII-related domain FEE38_25805 PF03544 Gram-negative bacterial TonB protein C-terminal FEE38_25810 PF03881 Fructosamine kinase FEE38_25815 PF11080 Endoribonuclease GhoS FEE38_25820 PF00294 pfkB family carbohydrate kinase FEE38_25825 PF04338 Protein of unknown function, DUF481 FEE38_25835 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FEE38_25835 PF02824 TGS domain FEE38_25835 PF03129 Anticodon binding domain FEE38_25835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FEE38_25840 PF00707 Translation initiation factor IF-3, C-terminal domain FEE38_25840 PF05198 Translation initiation factor IF-3, N-terminal domain FEE38_25845 PF01632 Ribosomal protein L35 FEE38_25850 PF00453 Ribosomal protein L20 FEE38_25865 PF01409 tRNA synthetases class II core domain (F) FEE38_25865 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FEE38_25870 PF03147 Ferredoxin-fold anticodon binding domain FEE38_25870 PF03484 tRNA synthetase B5 domain FEE38_25870 PF03483 B3/4 domain FEE38_25870 PF01588 Putative tRNA binding domain FEE38_25870 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FEE38_25875 PF00216 Bacterial DNA-binding protein FEE38_25885 PF01266 FAD dependent oxidoreductase FEE38_25890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_25890 PF03466 LysR substrate binding domain FEE38_25900 PF01032 FecCD transport family FEE38_25905 PF03180 NLPA lipoprotein FEE38_25910 PF00255 Glutathione peroxidase FEE38_25915 PF00005 ABC transporter FEE38_25920 PF00877 NlpC/P60 family FEE38_25925 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FEE38_25930 PF10636 Hemin uptake protein hemP FEE38_25935 PF00793 DAHP synthetase I family FEE38_25940 PF03618 Kinase/pyrophosphorylase FEE38_25945 PF00391 PEP-utilising enzyme, mobile domain FEE38_25945 PF02896 PEP-utilising enzyme, TIM barrel domain FEE38_25945 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FEE38_25955 PF01594 AI-2E family transporter FEE38_25960 PF13183 4Fe-4S dicluster domain FEE38_25960 PF01565 FAD binding domain FEE38_25960 PF02913 FAD linked oxidases, C-terminal domain FEE38_25965 PF03061 Thioesterase superfamily FEE38_25970 PF04226 Transglycosylase associated protein FEE38_25990 PF08267 Cobalamin-independent synthase, N-terminal domain FEE38_25990 PF01717 Cobalamin-independent synthase, Catalytic domain FEE38_25995 PF07690 Major Facilitator Superfamily FEE38_26000 PF00005 ABC transporter FEE38_26005 PF01032 FecCD transport family FEE38_26015 PF03466 LysR substrate binding domain FEE38_26015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26025 PF00440 Bacterial regulatory proteins, tetR family FEE38_26035 PF00873 AcrB/AcrD/AcrF family FEE38_26040 PF01070 FMN-dependent dehydrogenase FEE38_26045 PF00440 Bacterial regulatory proteins, tetR family FEE38_26060 PF01521 Iron-sulphur cluster biosynthesis FEE38_26065 PF01458 Uncharacterized protein family (UPF0051) FEE38_26070 PF00005 ABC transporter FEE38_26075 PF01458 Uncharacterized protein family (UPF0051) FEE38_26080 PF00266 Aminotransferase class-V FEE38_26085 PF02657 Fe-S metabolism associated domain FEE38_26090 PF03734 L,D-transpeptidase catalytic domain FEE38_26090 PF01476 LysM domain FEE38_26090 PF17969 L,D-transpeptidase C-terminal domain FEE38_26095 PF04728 Lipoprotein leucine-zipper FEE38_26100 PF02887 Pyruvate kinase, alpha/beta domain FEE38_26100 PF00224 Pyruvate kinase, barrel domain FEE38_26110 PF10965 Protein of unknown function (DUF2767) FEE38_26115 PF17926 Tetracyclin repressor-like, C-terminal domain FEE38_26115 PF00440 Bacterial regulatory proteins, tetR family FEE38_26125 PF07690 Major Facilitator Superfamily FEE38_26130 PF08501 Shikimate dehydrogenase substrate binding domain FEE38_26130 PF01488 Shikimate / quinate 5-dehydrogenase FEE38_26130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FEE38_26155 PF01614 Bacterial transcriptional regulator FEE38_26155 PF09339 IclR helix-turn-helix domain FEE38_26160 PF01494 FAD binding domain FEE38_26165 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FEE38_26170 PF12697 Alpha/beta hydrolase family FEE38_26175 PF01557 Fumarylacetoacetate (FAA) hydrolase family FEE38_26180 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation FEE38_26180 PF01118 Semialdehyde dehydrogenase, NAD binding domain FEE38_26185 PF00682 HMGL-like FEE38_26185 PF07836 DmpG-like communication domain FEE38_26190 PF07690 Major Facilitator Superfamily FEE38_26205 PF05995 Cysteine dioxygenase type I FEE38_26210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26210 PF03466 LysR substrate binding domain FEE38_26215 PF00296 Luciferase-like monooxygenase FEE38_26235 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26240 PF00005 ABC transporter FEE38_26245 PF07715 TonB-dependent Receptor Plug Domain FEE38_26250 PF00005 ABC transporter FEE38_26255 PF01032 FecCD transport family FEE38_26260 PF01032 FecCD transport family FEE38_26275 PF00497 Bacterial extracellular solute-binding proteins, family 3 FEE38_26280 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26285 PF00005 ABC transporter FEE38_26300 PF07690 Major Facilitator Superfamily FEE38_26315 PF07687 Peptidase dimerisation domain FEE38_26315 PF01546 Peptidase family M20/M25/M40 FEE38_26320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FEE38_26320 PF01568 Molydopterin dinucleotide binding domain FEE38_26320 PF00384 Molybdopterin oxidoreductase FEE38_26325 PF02615 Malate/L-lactate dehydrogenase FEE38_26340 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26345 PF08402 TOBE domain FEE38_26345 PF00005 ABC transporter FEE38_26355 PF05638 Type VI secretion system effector, Hcp FEE38_26370 PF13618 Gluconate 2-dehydrogenase subunit 3 FEE38_26375 PF05199 GMC oxidoreductase FEE38_26375 PF00732 GMC oxidoreductase FEE38_26380 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FEE38_26380 PF00034 Cytochrome c FEE38_26385 PF00005 ABC transporter FEE38_26390 PF03379 CcmB protein FEE38_26395 PF01578 Cytochrome C assembly protein FEE38_26405 PF03100 CcmE FEE38_26410 PF01578 Cytochrome C assembly protein FEE38_26410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FEE38_26415 PF08534 Redoxin FEE38_26420 PF03918 Cytochrome C biogenesis protein FEE38_26440 PF00672 HAMP domain FEE38_26440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_26440 PF00512 His Kinase A (phospho-acceptor) domain FEE38_26445 PF00072 Response regulator receiver domain FEE38_26445 PF00486 Transcriptional regulatory protein, C terminal FEE38_26460 PF00873 AcrB/AcrD/AcrF family FEE38_26475 PF00106 short chain dehydrogenase FEE38_26480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FEE38_26480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FEE38_26480 PF00205 Thiamine pyrophosphate enzyme, central domain FEE38_26485 PF03306 Alpha-acetolactate decarboxylase FEE38_26490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26490 PF03466 LysR substrate binding domain FEE38_26495 PF00106 short chain dehydrogenase FEE38_26505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FEE38_26505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FEE38_26510 PF00108 Thiolase, N-terminal domain FEE38_26510 PF02803 Thiolase, C-terminal domain FEE38_26515 PF01144 Coenzyme A transferase FEE38_26520 PF01144 Coenzyme A transferase FEE38_26525 PF03466 LysR substrate binding domain FEE38_26525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26540 PF07690 Major Facilitator Superfamily FEE38_26545 PF01638 HxlR-like helix-turn-helix FEE38_26555 PF07690 Major Facilitator Superfamily FEE38_26560 PF09828 Chromate resistance exported protein FEE38_26570 PF02913 FAD linked oxidases, C-terminal domain FEE38_26570 PF01565 FAD binding domain FEE38_26575 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26580 PF00005 ABC transporter FEE38_26590 PF02633 Creatinine amidohydrolase FEE38_26595 PF01042 Endoribonuclease L-PSP FEE38_26600 PF07969 Amidohydrolase family FEE38_26605 PF00175 Oxidoreductase NAD-binding domain FEE38_26605 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_26610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26610 PF03466 LysR substrate binding domain FEE38_26620 PF01979 Amidohydrolase family FEE38_26630 PF03466 LysR substrate binding domain FEE38_26630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26635 PF07690 Major Facilitator Superfamily FEE38_26655 PF00005 ABC transporter FEE38_26655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_26660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_26660 PF00005 ABC transporter FEE38_26665 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26670 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_26675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_26685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FEE38_26690 PF00455 DeoR C terminal sensor domain FEE38_26690 PF08220 DeoR-like helix-turn-helix domain FEE38_26700 PF00484 Carbonic anhydrase FEE38_26720 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FEE38_26720 PF10996 Beta-Casp domain FEE38_26720 PF00753 Metallo-beta-lactamase superfamily FEE38_26730 PF03466 LysR substrate binding domain FEE38_26730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26740 PF00106 short chain dehydrogenase FEE38_26755 PF01609 Transposase DDE domain FEE38_26755 PF05598 Transposase domain (DUF772) FEE38_26775 PF03641 Possible lysine decarboxylase FEE38_26785 PF01554 MatE FEE38_26790 PF00677 Lumazine binding domain FEE38_26800 PF07690 Major Facilitator Superfamily FEE38_26805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_26805 PF03466 LysR substrate binding domain FEE38_26810 PF00356 Bacterial regulatory proteins, lacI family FEE38_26820 PF07690 Major Facilitator Superfamily FEE38_26825 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FEE38_26825 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FEE38_26835 PF00877 NlpC/P60 family FEE38_26840 PF00462 Glutaredoxin FEE38_26845 PF00929 Exonuclease FEE38_26850 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FEE38_26855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FEE38_26860 PF16925 Tetracyclin repressor-like, C-terminal domain FEE38_26860 PF00440 Bacterial regulatory proteins, tetR family FEE38_26865 PF06945 Protein of unknown function (DUF1289) FEE38_26870 PF00248 Aldo/keto reductase family FEE38_26875 PF00080 Copper/zinc superoxide dismutase (SODC) FEE38_26880 PF04632 Fusaric acid resistance protein family FEE38_26885 PF00529 HlyD membrane-fusion protein of T1SS FEE38_26885 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_26890 PF07869 Protein of unknown function (DUF1656) FEE38_26895 PF01047 MarR family FEE38_26900 PF17158 Membrane-associated sensor, integral membrane domain FEE38_26900 PF00990 Diguanylate cyclase, GGDEF domain FEE38_26905 PF05433 Glycine zipper 2TM domain FEE38_26910 PF03702 Anhydro-N-acetylmuramic acid kinase FEE38_26915 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FEE38_26920 PF01243 Pyridoxamine 5'-phosphate oxidase FEE38_26920 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FEE38_26925 PF00579 tRNA synthetases class I (W and Y) FEE38_26930 PF08543 Phosphomethylpyrimidine kinase FEE38_26935 PF00043 Glutathione S-transferase, C-terminal domain FEE38_26935 PF02798 Glutathione S-transferase, N-terminal domain FEE38_26940 PF00854 POT family FEE38_26950 PF10576 Iron-sulfur binding domain of endonuclease III FEE38_26950 PF00633 Helix-hairpin-helix motif FEE38_26950 PF00730 HhH-GPD superfamily base excision DNA repair protein FEE38_26955 PF02508 Rnf-Nqr subunit, membrane protein FEE38_26960 PF04205 FMN-binding domain FEE38_26965 PF03116 NQR2, RnfD, RnfE family FEE38_26970 PF13375 RnfC Barrel sandwich hybrid domain FEE38_26970 PF12838 4Fe-4S dicluster domain FEE38_26970 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FEE38_26970 PF10531 SLBB domain FEE38_26975 PF04060 Putative Fe-S cluster FEE38_26980 PF02508 Rnf-Nqr subunit, membrane protein FEE38_26985 PF10754 Protein of unknown function (DUF2569) FEE38_26990 PF05321 Haemolysin expression modulating protein FEE38_26995 PF00232 Glycosyl hydrolase family 1 FEE38_27005 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FEE38_27005 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FEE38_27010 PF00962 Adenosine/AMP deaminase FEE38_27015 PF07690 Major Facilitator Superfamily FEE38_27020 PF01638 HxlR-like helix-turn-helix FEE38_27035 PF01292 Prokaryotic cytochrome b561 FEE38_27040 PF02583 Metal-sensitive transcriptional repressor FEE38_27045 PF00107 Zinc-binding dehydrogenase FEE38_27045 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_27050 PF01011 PQQ enzyme repeat FEE38_27055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_27055 PF03466 LysR substrate binding domain FEE38_27060 PF00775 Dioxygenase FEE38_27065 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FEE38_27065 PF00775 Dioxygenase FEE38_27070 PF07063 Domain of unknown function (DUF1338) FEE38_27075 PF00135 Carboxylesterase family FEE38_27080 PF00107 Zinc-binding dehydrogenase FEE38_27080 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_27085 PF04349 Periplasmic glucan biosynthesis protein, MdoG FEE38_27090 PF13302 Acetyltransferase (GNAT) domain FEE38_27095 PF18836 Beta solenoid repeat from YDCK FEE38_27100 PF03595 Voltage-dependent anion channel FEE38_27105 PF03848 Tellurite resistance protein TehB FEE38_27110 PF11769 Protein of unknown function (DUF3313) FEE38_27115 PF00892 EamA-like transporter family FEE38_27120 PF06445 GyrI-like small molecule binding domain FEE38_27120 PF12833 Helix-turn-helix domain FEE38_27125 PF03594 Benzoate membrane transport protein FEE38_27130 PF01381 Helix-turn-helix FEE38_27130 PF07883 Cupin domain FEE38_27140 PF12392 Collagenase FEE38_27140 PF01136 Peptidase family U32 FEE38_27160 PF02322 Cytochrome bd terminal oxidase subunit II FEE38_27165 PF01654 Cytochrome bd terminal oxidase subunit I FEE38_27170 PF00392 Bacterial regulatory proteins, gntR family FEE38_27170 PF00155 Aminotransferase class I and II FEE38_27175 PF13416 Bacterial extracellular solute-binding protein FEE38_27180 PF08402 TOBE domain FEE38_27180 PF00005 ABC transporter FEE38_27185 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_27190 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_27195 PF00171 Aldehyde dehydrogenase family FEE38_27220 PF10753 Toxin GhoT_OrtT FEE38_27225 PF00364 Biotin-requiring enzyme FEE38_27225 PF00561 alpha/beta hydrolase fold FEE38_27230 PF00171 Aldehyde dehydrogenase family FEE38_27235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_27240 PF10735 Protein of unknown function (DUF2526) FEE38_27245 PF04657 Putative inner membrane exporter, YdcZ FEE38_27250 PF00583 Acetyltransferase (GNAT) family FEE38_27255 PF08671 Anti-repressor SinI FEE38_27255 PF01381 Helix-turn-helix FEE38_27260 PF00107 Zinc-binding dehydrogenase FEE38_27260 PF16884 N-terminal domain of oxidoreductase FEE38_27265 PF01156 Inosine-uridine preferring nucleoside hydrolase FEE38_27275 PF04175 Protein of unknown function (DUF406) FEE38_27280 PF01979 Amidohydrolase family FEE38_27285 PF00593 TonB dependent receptor FEE38_27285 PF07715 TonB-dependent Receptor Plug Domain FEE38_27300 PF00324 Amino acid permease FEE38_27305 PF03466 LysR substrate binding domain FEE38_27305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FEE38_27310 PF01202 Shikimate kinase FEE38_27315 PF00296 Luciferase-like monooxygenase FEE38_27320 PF01546 Peptidase family M20/M25/M40 FEE38_27320 PF07687 Peptidase dimerisation domain FEE38_27325 PF00296 Luciferase-like monooxygenase FEE38_27340 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_27345 PF00005 ABC transporter FEE38_27355 PF13417 Glutathione S-transferase, N-terminal domain FEE38_27360 PF01361 Tautomerase enzyme FEE38_27380 PF11471 Maltoporin periplasmic N-terminal extension FEE38_27380 PF02264 LamB porin FEE38_27395 PF02311 AraC-like ligand binding domain FEE38_27395 PF12833 Helix-turn-helix domain FEE38_27400 PF01613 Flavin reductase like domain FEE38_27405 PF00005 ABC transporter FEE38_27405 PF17912 MalK OB fold domain FEE38_27415 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_27420 PF00797 N-acetyltransferase FEE38_27430 PF02665 Nitrate reductase gamma subunit FEE38_27435 PF02613 Nitrate reductase delta subunit FEE38_27440 PF13247 4Fe-4S dicluster domain FEE38_27440 PF14711 Respiratory nitrate reductase beta C-terminal FEE38_27445 PF14710 Respiratory nitrate reductase alpha N-terminal FEE38_27445 PF01568 Molydopterin dinucleotide binding domain FEE38_27445 PF00384 Molybdopterin oxidoreductase FEE38_27450 PF07690 Major Facilitator Superfamily FEE38_27460 PF07690 Major Facilitator Superfamily FEE38_27465 PF01614 Bacterial transcriptional regulator FEE38_27465 PF09339 IclR helix-turn-helix domain FEE38_27470 PF13378 Enolase C-terminal domain-like FEE38_27470 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FEE38_27475 PF02426 Muconolactone delta-isomerase FEE38_27480 PF00775 Dioxygenase FEE38_27480 PF04444 Catechol dioxygenase N terminus FEE38_27485 PF00355 Rieske [2Fe-2S] domain FEE38_27485 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FEE38_27490 PF00866 Ring hydroxylating beta subunit FEE38_27495 PF00175 Oxidoreductase NAD-binding domain FEE38_27495 PF00111 2Fe-2S iron-sulfur cluster binding domain FEE38_27495 PF00970 Oxidoreductase FAD-binding domain FEE38_27500 PF00106 short chain dehydrogenase FEE38_27505 PF00892 EamA-like transporter family FEE38_27515 PF09163 Formate dehydrogenase N, transmembrane FEE38_27515 PF12800 4Fe-4S binding domain FEE38_27515 PF13247 4Fe-4S dicluster domain FEE38_27520 PF01292 Prokaryotic cytochrome b561 FEE38_27535 PF03976 Polyphosphate kinase 2 (PPK2) FEE38_27545 PF07690 Major Facilitator Superfamily FEE38_27555 PF00296 Luciferase-like monooxygenase FEE38_27560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_27560 PF00005 ABC transporter FEE38_27570 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_27575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_27580 PF08240 Alcohol dehydrogenase GroES-like domain FEE38_27580 PF00107 Zinc-binding dehydrogenase FEE38_27585 PF00719 Inorganic pyrophosphatase FEE38_27635 PF00085 Thioredoxin FEE38_27640 PF02254 TrkA-N domain FEE38_27640 PF02080 TrkA-C domain FEE38_27640 PF00999 Sodium/hydrogen exchanger family FEE38_27650 PF01435 Peptidase family M48 FEE38_27655 PF13180 PDZ domain FEE38_27665 PF01548 Transposase FEE38_27665 PF02371 Transposase IS116/IS110/IS902 family FEE38_27700 PF01979 Amidohydrolase family FEE38_27705 PF07687 Peptidase dimerisation domain FEE38_27705 PF01546 Peptidase family M20/M25/M40 FEE38_27710 PF01180 Dihydroorotate dehydrogenase FEE38_27715 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FEE38_27715 PF00970 Oxidoreductase FAD-binding domain FEE38_27720 PF07690 Major Facilitator Superfamily FEE38_27730 PF01695 IstB-like ATP binding protein FEE38_27735 PF02796 Helix-turn-helix domain of resolvase FEE38_27735 PF00665 Integrase core domain FEE38_27750 PF01569 PAP2 superfamily FEE38_27755 PF13737 Transposase DDE domain FEE38_27770 PF13737 Transposase DDE domain FEE38_27780 PF02151 UvrB/uvrC motif FEE38_27780 PF01541 GIY-YIG catalytic domain FEE38_27780 PF12826 Helix-hairpin-helix motif FEE38_27780 PF08459 UvrC Helix-hairpin-helix N-terminal FEE38_27795 PF02387 IncFII RepA protein family FEE38_27805 PF10723 Replication regulatory protein RepB FEE38_27850 PF18766 SWI2/SNF2 ATPase FEE38_27850 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FEE38_27850 PF11867 Domain of unknown function (DUF3387) FEE38_27855 PF02810 SEC-C motif FEE38_27855 PF03695 Uncharacterised protein family (UPF0149) FEE38_27870 PF13737 Transposase DDE domain FEE38_27890 PF12602 Fertility inhibition protein N terminal FEE38_27890 PF04352 ProQ/FINO family FEE38_27895 PF05857 TraX protein FEE38_27900 PF07057 DNA helicase TraI FEE38_27900 PF18340 DNA relaxase TraI 2B/2B-like domain FEE38_27900 PF18272 single-stranded DNA binding TraI N-terminal subdomain FEE38_27900 PF08751 TrwC relaxase FEE38_27905 PF10412 Type IV secretion-system coupling protein DNA-binding domain FEE38_27905 PF12615 F sex factor protein N terminal FEE38_27920 PF13737 Transposase DDE domain FEE38_27935 PF13728 F plasmid transfer operon protein FEE38_27940 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) FEE38_27945 PF13728 F plasmid transfer operon protein FEE38_27960 PF11100 Conjugal transfer protein TrbE FEE38_27965 PF06986 Type-1V conjugative transfer system mating pair stabilisation FEE38_27970 PF09673 Type-F conjugative transfer system pilin assembly protein FEE38_27975 PF06834 TraU protein FEE38_27980 PF12477 Sex factor F TraW protein N terminal FEE38_27985 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) FEE38_27990 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer FEE38_28030 PF09676 Type IV conjugative transfer system lipoprotein (TraV) FEE38_28035 PF03743 Bacterial conjugation TrbI-like protein FEE38_28040 PF06586 TraK protein FEE38_28045 PF05309 TraE protein FEE38_28050 PF07178 TraL protein FEE38_28055 PF05513 TraA FEE38_28060 PF05509 TraY domain FEE38_28070 PF13737 Transposase DDE domain FEE38_28075 PF05261 TraM protein, DNA-binding FEE38_28080 PF01464 Transglycosylase SLT domain FEE38_28090 PF06067 Domain of unknown function (DUF932) FEE38_28110 PF01252 Signal peptidase (SPase) II FEE38_28120 PF13411 MerR HTH family regulatory protein FEE38_28175 PF01609 Transposase DDE domain FEE38_28180 PF01848 Hok/gef family FEE38_28190 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FEE38_28195 PF04221 RelB antitoxin FEE38_28220 PF09828 Chromate resistance exported protein FEE38_28245 PF13737 Transposase DDE domain FEE38_28250 PF07690 Major Facilitator Superfamily FEE38_28260 PF03824 High-affinity nickel-transport protein FEE38_28265 PF04076 Bacterial OB fold (BOF) protein FEE38_28275 PF00665 Integrase core domain FEE38_28275 PF13333 Integrase core domain FEE38_28275 PF13276 HTH-like domain FEE38_28275 PF01527 Transposase FEE38_28290 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_28315 PF06290 Plasmid SOS inhibition protein (PsiB) FEE38_28320 PF02195 ParB-like nuclease domain FEE38_28325 PF06006 Bacterial protein of unknown function (DUF905) FEE38_28330 PF00436 Single-strand binding protein family FEE38_28350 PF00398 Ribosomal RNA adenine dimethylase FEE38_28390 PF06440 DNA polymerase III, theta subunit FEE38_28405 PF03230 Antirestriction protein FEE38_28415 PF07128 Protein of unknown function (DUF1380) FEE38_28425 PF01555 DNA methylase FEE38_28440 PF06406 StbA protein FEE38_28445 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FEE38_28455 PF00717 Peptidase S24-like FEE38_28460 PF11799 impB/mucB/samB family C-terminal domain FEE38_28460 PF00817 impB/mucB/samB family FEE38_28460 PF13438 Domain of unknown function (DUF4113) FEE38_28485 PF18090 Centromere-binding protein HTH domain FEE38_28485 PF02195 ParB-like nuclease domain FEE38_28490 PF13614 AAA domain FEE38_28495 PF01051 Initiator Replication protein FEE38_28500 PF00589 Phage integrase family FEE38_28540 PF00072 Response regulator receiver domain FEE38_28540 PF00196 Bacterial regulatory proteins, luxR family FEE38_28545 PF13737 Transposase DDE domain FEE38_28555 PF13737 Transposase DDE domain FEE38_28565 PF00419 Fimbrial protein FEE38_28570 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FEE38_28570 PF02753 Pili assembly chaperone PapD, C-terminal domain FEE38_28575 PF13954 PapC N-terminal domain FEE38_28575 PF13953 PapC C-terminal domain FEE38_28575 PF00577 Outer membrane usher protein FEE38_28580 PF00419 Fimbrial protein FEE38_28595 PF01609 Transposase DDE domain FEE38_28595 PF05598 Transposase domain (DUF772) FEE38_28605 PF13737 Transposase DDE domain FEE38_28615 PF00589 Phage integrase family FEE38_28635 PF01845 CcdB protein FEE38_28640 PF07362 Post-segregation antitoxin CcdA FEE38_28655 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FEE38_28660 PF01850 PIN domain FEE38_28665 PF02463 RecF/RecN/SMC N terminal domain FEE38_28685 PF13737 Transposase DDE domain FEE38_28695 PF00672 HAMP domain FEE38_28695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_28695 PF00512 His Kinase A (phospho-acceptor) domain FEE38_28700 PF00072 Response regulator receiver domain FEE38_28700 PF00486 Transcriptional regulatory protein, C terminal FEE38_28705 PF02321 Outer membrane efflux protein FEE38_28710 PF11604 Copper binding periplasmic protein CusF FEE38_28715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FEE38_28720 PF00873 AcrB/AcrD/AcrF family FEE38_28730 PF04945 YHS domain FEE38_28740 PF01476 LysM domain FEE38_28740 PF08525 Opacity-associated protein A N-terminal motif FEE38_28740 PF01551 Peptidase family M23 FEE38_28750 PF07732 Multicopper oxidase FEE38_28750 PF00394 Multicopper oxidase FEE38_28750 PF07731 Multicopper oxidase FEE38_28755 PF05275 Copper resistance protein B precursor (CopB) FEE38_28760 PF04234 CopC domain FEE38_28765 PF05425 Copper resistance protein D FEE38_28770 PF00072 Response regulator receiver domain FEE38_28770 PF00486 Transcriptional regulatory protein, C terminal FEE38_28775 PF00512 His Kinase A (phospho-acceptor) domain FEE38_28775 PF00672 HAMP domain FEE38_28775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_28805 PF05717 IS66 Orf2 like protein FEE38_28810 PF13817 IS66 C-terminal element FEE38_28810 PF13005 zinc-finger binding domain of transposase IS66 FEE38_28810 PF03050 Transposase IS66 family FEE38_28810 PF13007 Transposase C of IS166 homeodomain FEE38_28835 PF05321 Haemolysin expression modulating protein FEE38_28865 PF01435 Peptidase family M48 FEE38_28885 PF17871 AAA lid domain FEE38_28885 PF10431 C-terminal, D2-small domain, of ClpB protein FEE38_28885 PF00004 ATPase family associated with various cellular activities (AAA) FEE38_28885 PF07724 AAA domain (Cdc48 subfamily) FEE38_28885 PF02861 Clp amino terminal domain, pathogenicity island component FEE38_28890 PF00011 Hsp20/alpha crystallin family FEE38_28895 PF12728 Helix-turn-helix domain FEE38_28920 PF00795 Carbon-nitrogen hydrolase FEE38_28925 PF00005 ABC transporter FEE38_28930 PF00005 ABC transporter FEE38_28930 PF12399 Branched-chain amino acid ATP-binding cassette transporter FEE38_28935 PF02653 Branched-chain amino acid transport system / permease component FEE38_28940 PF02653 Branched-chain amino acid transport system / permease component FEE38_28940 PF11862 Domain of unknown function (DUF3382) FEE38_28945 PF13458 Periplasmic binding protein FEE38_28950 PF00072 Response regulator receiver domain FEE38_28950 PF18415 Histidine kinase receptor ArcB trans-membrane domain FEE38_28950 PF00512 His Kinase A (phospho-acceptor) domain FEE38_28950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FEE38_28950 PF01627 Hpt domain FEE38_28950 PF00989 PAS fold FEE38_28955 PF00072 Response regulator receiver domain FEE38_28955 PF00486 Transcriptional regulatory protein, C terminal FEE38_28970 PF13737 Transposase DDE domain FEE38_28975 PF01548 Transposase FEE38_28975 PF02371 Transposase IS116/IS110/IS902 family FEE38_28980 PF01609 Transposase DDE domain FEE38_28980 PF05598 Transposase domain (DUF772) FEE38_28990 PF00005 ABC transporter FEE38_28990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FEE38_28995 PF03069 Acetamidase/Formamidase family FEE38_29000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FEE38_29005 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_29010 PF00528 Binding-protein-dependent transport system inner membrane component FEE38_29010 PF12911 N-terminal TM domain of oligopeptide transport permease C FEE38_29035 PF04542 Sigma-70 region 2 FEE38_29035 PF08281 Sigma-70, region 4 FEE38_29040 PF04773 FecR protein FEE38_29040 PF16220 Domain of unknown function (DUF4880) FEE38_29045 PF00593 TonB dependent receptor FEE38_29045 PF07715 TonB-dependent Receptor Plug Domain FEE38_29045 PF07660 Secretin and TonB N terminus short domain FEE38_29050 PF01497 Periplasmic binding protein FEE38_29055 PF01032 FecCD transport family FEE38_29060 PF01032 FecCD transport family FEE38_29065 PF00005 ABC transporter FEE38_29070 PF05717 IS66 Orf2 like protein FEE38_29085 PF01548 Transposase FEE38_29085 PF02371 Transposase IS116/IS110/IS902 family FEE38_29090 PF00356 Bacterial regulatory proteins, lacI family FEE38_29095 PF02929 Beta galactosidase small chain FEE38_29095 PF02837 Glycosyl hydrolases family 2, sugar binding domain FEE38_29095 PF00703 Glycosyl hydrolases family 2 FEE38_29095 PF16353 Domain of unknown function(DUF4981) FEE38_29095 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FEE38_29100 PF01306 LacY proton/sugar symporter FEE38_29105 PF12464 Maltose acetyltransferase FEE38_29105 PF00132 Bacterial transferase hexapeptide (six repeats) FEE38_29110 PF02264 LamB porin FEE38_29115 PF08349 Protein of unknown function (DUF1722) FEE38_29125 PF13737 Transposase DDE domain FEE38_29135 PF12728 Helix-turn-helix domain FEE38_29140 PF00011 Hsp20/alpha crystallin family