locus-tag class description JT746_00005 PF08299 Bacterial dnaA protein helix-turn-helix JT746_00005 PF00308 Bacterial dnaA protein JT746_00005 PF11638 DnaA N-terminal domain JT746_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JT746_00010 PF02767 DNA polymerase III beta subunit, central domain JT746_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JT746_00015 PF02463 RecF/RecN/SMC N terminal domain JT746_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_00020 PF01751 Toprim domain JT746_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JT746_00020 PF00204 DNA gyrase B JT746_00020 PF18053 DNA gyrase B subunit insert domain JT746_00040 PF07676 WD40-like Beta Propeller Repeat JT746_00040 PF12566 Protein of unknown function (DUF3748) JT746_00045 PF07119 Protein of unknown function (DUF1375) JT746_00050 PF00011 Hsp20/alpha crystallin family JT746_00055 PF00011 Hsp20/alpha crystallin family JT746_00060 PF02080 TrkA-C domain JT746_00060 PF06826 Predicted Permease Membrane Region JT746_00065 PF07702 UTRA domain JT746_00065 PF00392 Bacterial regulatory proteins, gntR family JT746_00070 PF02378 Phosphotransferase system, EIIC JT746_00070 PF00367 phosphotransferase system, EIIB JT746_00075 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_00075 PF02056 Family 4 glycosyl hydrolase JT746_00080 PF02656 Domain of unknown function (DUF202) JT746_00085 PF02656 Domain of unknown function (DUF202) JT746_00095 PF00291 Pyridoxal-phosphate dependent enzyme JT746_00100 PF02447 GntP family permease JT746_00105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_00105 PF03466 LysR substrate binding domain JT746_00110 PF07690 Major Facilitator Superfamily JT746_00140 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_00140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_00140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_00145 PF01842 ACT domain JT746_00150 PF00072 Response regulator receiver domain JT746_00150 PF00196 Bacterial regulatory proteins, luxR family JT746_00155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_00155 PF07730 Histidine kinase JT746_00155 PF05231 MASE1 JT746_00160 PF07690 Major Facilitator Superfamily JT746_00165 PF07690 Major Facilitator Superfamily JT746_00170 PF06711 Protein of unknown function (DUF1198) JT746_00185 PF07690 Major Facilitator Superfamily JT746_00195 PF00266 Aminotransferase class-V JT746_00200 PF07702 UTRA domain JT746_00200 PF00392 Bacterial regulatory proteins, gntR family JT746_00205 PF01547 Bacterial extracellular solute-binding protein JT746_00210 PF08402 TOBE domain JT746_00210 PF00005 ABC transporter JT746_00215 PF00528 Binding-protein-dependent transport system inner membrane component JT746_00220 PF00528 Binding-protein-dependent transport system inner membrane component JT746_00225 PF02264 LamB porin JT746_00230 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT746_00235 PF02378 Phosphotransferase system, EIIC JT746_00235 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_00240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_00250 PF00356 Bacterial regulatory proteins, lacI family JT746_00255 PF07690 Major Facilitator Superfamily JT746_00260 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT746_00260 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit JT746_00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_00265 PF03466 LysR substrate binding domain JT746_00270 PF02585 GlcNAc-PI de-N-acetylase JT746_00275 PF03737 Aldolase/RraA JT746_00280 PF04303 PrpF protein JT746_00285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT746_00285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT746_00295 PF00892 EamA-like transporter family JT746_00300 PF02378 Phosphotransferase system, EIIC JT746_00300 PF00367 phosphotransferase system, EIIB JT746_00305 PF13580 SIS domain JT746_00310 PF07690 Major Facilitator Superfamily JT746_00315 PF02321 Outer membrane efflux protein JT746_00320 PF00873 AcrB/AcrD/AcrF family JT746_00325 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_00325 PF00529 HlyD membrane-fusion protein of T1SS JT746_00340 PF00583 Acetyltransferase (GNAT) family JT746_00345 PF00440 Bacterial regulatory proteins, tetR family JT746_00345 PF13977 BetI-type transcriptional repressor, C-terminal JT746_00350 PF07690 Major Facilitator Superfamily JT746_00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_00355 PF03466 LysR substrate binding domain JT746_00380 PF03180 NLPA lipoprotein JT746_00390 PF00293 NUDIX domain JT746_00395 PF12706 Beta-lactamase superfamily domain JT746_00400 PF01965 DJ-1/PfpI family JT746_00405 PF08240 Alcohol dehydrogenase GroES-like domain JT746_00405 PF00107 Zinc-binding dehydrogenase JT746_00410 PF15977 Winged helix-turn-helix DNA binding JT746_00420 PF00107 Zinc-binding dehydrogenase JT746_00420 PF08240 Alcohol dehydrogenase GroES-like domain JT746_00445 PF02056 Family 4 glycosyl hydrolase JT746_00445 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_00450 PF02378 Phosphotransferase system, EIIC JT746_00450 PF00367 phosphotransferase system, EIIB JT746_00455 PF05170 AsmA family JT746_00460 PF00860 Permease family JT746_00465 PF03616 Sodium/glutamate symporter JT746_00470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_00470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_00475 PF00230 Major intrinsic protein JT746_00480 PF06005 Cell division protein ZapB JT746_00490 PF02611 CDP-diacylglycerol pyrophosphatase JT746_00500 PF00121 Triosephosphate isomerase JT746_00505 PF07305 Protein of unknown function (DUF1454) JT746_00510 PF05656 Protein of unknown function (DUF805) JT746_00515 PF00175 Oxidoreductase NAD-binding domain JT746_00515 PF00970 Oxidoreductase FAD-binding domain JT746_00520 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JT746_00525 PF17191 RecG wedge domain JT746_00525 PF00270 DEAD/DEAH box helicase JT746_00525 PF00271 Helicase conserved C-terminal domain JT746_00530 PF12105 SpoU, rRNA methylase, C-terminal JT746_00530 PF00588 SpoU rRNA Methylase family JT746_00535 PF02824 TGS domain JT746_00535 PF04607 Region found in RelA / SpoT proteins JT746_00535 PF13291 ACT domain JT746_00540 PF01192 RNA polymerase Rpb6 JT746_00545 PF00625 Guanylate kinase JT746_00550 PF01653 NAD-dependent DNA ligase adenylation domain JT746_00550 PF03120 NAD-dependent DNA ligase OB-fold domain JT746_00555 PF03458 UPF0126 domain JT746_00565 PF03755 YicC-like family, N-terminal region JT746_00565 PF08340 Domain of unknown function (DUF1732) JT746_00570 PF01138 3' exoribonuclease family, domain 1 JT746_00570 PF03725 3' exoribonuclease family, domain 2 JT746_00575 PF00156 Phosphoribosyl transferase domain JT746_00580 PF00440 Bacterial regulatory proteins, tetR family JT746_00585 PF00692 dUTPase JT746_00590 PF04127 DNA / pantothenate metabolism flavoprotein JT746_00590 PF02441 Flavoprotein JT746_00595 PF04002 RadC-like JAB domain JT746_00600 PF00830 Ribosomal L28 family JT746_00605 PF00471 Ribosomal protein L33 JT746_00610 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JT746_00610 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JT746_00610 PF06827 Zinc finger found in FPG and IleRS JT746_00615 PF01467 Cytidylyltransferase-like JT746_00620 PF00535 Glycosyl transferase family 2 JT746_00625 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JT746_00630 PF00535 Glycosyl transferase family 2 JT746_00635 PF00534 Glycosyl transferases group 1 JT746_00635 PF13439 Glycosyltransferase Family 4 JT746_00640 PF13439 Glycosyltransferase Family 4 JT746_00640 PF00534 Glycosyl transferases group 1 JT746_00645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT746_00660 PF04932 O-Antigen ligase JT746_00670 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT746_00675 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT746_00680 PF01370 NAD dependent epimerase/dehydratase family JT746_00685 PF00155 Aminotransferase class I and II JT746_00690 PF00107 Zinc-binding dehydrogenase JT746_00690 PF08240 Alcohol dehydrogenase GroES-like domain JT746_00695 PF00535 Glycosyl transferase family 2 JT746_00700 PF04748 Divergent polysaccharide deacetylase JT746_00705 PF01551 Peptidase family M23 JT746_00710 PF01676 Metalloenzyme superfamily JT746_00710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JT746_00715 PF00581 Rhodanese-like domain JT746_00720 PF00462 Glutaredoxin JT746_00725 PF02556 Preprotein translocase subunit SecB JT746_00730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JT746_00730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JT746_00735 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_00735 PF06426 Serine acetyltransferase, N-terminal JT746_00740 PF00588 SpoU rRNA Methylase family JT746_00745 PF01070 FMN-dependent dehydrogenase JT746_00750 PF07729 FCD domain JT746_00750 PF00392 Bacterial regulatory proteins, gntR family JT746_00755 PF02652 L-lactate permease JT746_00760 PF10928 Protein of unknown function (DUF2810) JT746_00770 PF05068 Mannitol repressor JT746_00775 PF08125 Mannitol dehydrogenase C-terminal domain JT746_00775 PF01232 Mannitol dehydrogenase Rossmann domain JT746_00780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_00780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_00780 PF02378 Phosphotransferase system, EIIC JT746_00785 PF11742 Protein of unknown function (DUF3302) JT746_00790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_00790 PF00529 HlyD membrane-fusion protein of T1SS JT746_00795 PF00043 Glutathione S-transferase, C-terminal domain JT746_00795 PF13417 Glutathione S-transferase, N-terminal domain JT746_00800 PF03841 L-seryl-tRNA selenium transferase JT746_00800 PF12390 Selenocysteine synthase N terminal JT746_00805 PF09107 Elongation factor SelB, winged helix JT746_00805 PF09106 Elongation factor SelB, winged helix JT746_00805 PF03144 Elongation factor Tu domain 2 JT746_00805 PF00009 Elongation factor Tu GTP binding domain JT746_00810 PF07944 Beta-L-arabinofuranosidase, GH127 JT746_00820 PF12833 Helix-turn-helix domain JT746_00820 PF02311 AraC-like ligand binding domain JT746_00825 PF12800 4Fe-4S binding domain JT746_00825 PF13247 4Fe-4S dicluster domain JT746_00830 PF00155 Aminotransferase class I and II JT746_00835 PF00128 Alpha amylase, catalytic domain JT746_00840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JT746_00845 PF12833 Helix-turn-helix domain JT746_00850 PF02653 Branched-chain amino acid transport system / permease component JT746_00855 PF00005 ABC transporter JT746_00860 PF13407 Periplasmic binding protein domain JT746_00870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_00870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_00875 PF05360 yiaA/B two helix domain JT746_00880 PF05360 yiaA/B two helix domain JT746_00885 PF01757 Acyltransferase family JT746_00890 PF13983 YsaB-like lipoprotein JT746_00895 PF02091 Glycyl-tRNA synthetase alpha subunit JT746_00900 PF05746 DALR anticodon binding domain JT746_00900 PF02092 Glycyl-tRNA synthetase beta subunit JT746_00905 PF01848 Hok/gef family JT746_00910 PF12848 ABC transporter JT746_00910 PF00005 ABC transporter JT746_00915 PF00313 'Cold-shock' DNA-binding domain JT746_00920 PF01381 Helix-turn-helix JT746_00925 PF07690 Major Facilitator Superfamily JT746_00935 PF11254 Protein of unknown function (DUF3053) JT746_00940 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_00940 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_00950 PF00294 pfkB family carbohydrate kinase JT746_00960 PF00356 Bacterial regulatory proteins, lacI family JT746_00965 PF00691 OmpA family JT746_00965 PF13488 Glycine zipper JT746_00970 PF00384 Molybdopterin oxidoreductase JT746_00970 PF01568 Molydopterin dinucleotide binding domain JT746_00970 PF18364 Molybdopterin oxidoreductase N-terminal domain JT746_00975 PF00583 Acetyltransferase (GNAT) family JT746_00980 PF03352 Methyladenine glycosylase JT746_00985 PF03797 Autotransporter beta-domain JT746_00990 PF07690 Major Facilitator Superfamily JT746_00995 PF00884 Sulfatase JT746_00995 PF08019 Phosphoethanolamine transferase EptA/EptB JT746_01030 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_01035 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01040 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_01040 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01045 PF00005 ABC transporter JT746_01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_01050 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_01050 PF00005 ABC transporter JT746_01065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT746_01070 PF03170 Bacterial cellulose synthase subunit JT746_01070 PF03552 Cellulose synthase JT746_01070 PF00535 Glycosyl transferase family 2 JT746_01070 PF07238 PilZ domain JT746_01075 PF03170 Bacterial cellulose synthase subunit JT746_01080 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JT746_01090 PF01270 Glycosyl hydrolases family 8 JT746_01095 PF11658 Cellulose biosynthesis protein BcsG JT746_01100 PF11120 Cellulose biosynthesis protein BcsF JT746_01105 PF10995 Cellulose biosynthesis GIL JT746_01110 PF10945 Cellulose biosynthesis protein BcsR JT746_01115 PF06564 Cellulose biosynthesis protein BcsQ JT746_01120 PF07238 PilZ domain JT746_01120 PF00535 Glycosyl transferase family 2 JT746_01125 PF03170 Bacterial cellulose synthase subunit JT746_01130 PF01270 Glycosyl hydrolases family 8 JT746_01135 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) JT746_01140 PF00563 EAL domain JT746_01140 PF17154 Gammaproteobacterial periplasmic sensor domain JT746_01140 PF00990 Diguanylate cyclase, GGDEF domain JT746_01140 PF00672 HAMP domain JT746_01145 PF00375 Sodium:dicarboxylate symporter family JT746_01150 PF05193 Peptidase M16 inactive domain JT746_01150 PF00675 Insulinase (Peptidase family M16) JT746_01155 PF00294 pfkB family carbohydrate kinase JT746_01160 PF05170 AsmA family JT746_01165 PF07690 Major Facilitator Superfamily JT746_01165 PF00083 Sugar (and other) transporter JT746_01170 PF03631 Virulence factor BrkB JT746_01175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_01175 PF03466 LysR substrate binding domain JT746_01185 PF13302 Acetyltransferase (GNAT) domain JT746_01190 PF01204 Trehalase JT746_01195 PF00465 Iron-containing alcohol dehydrogenase JT746_01205 PF00144 Beta-lactamase JT746_01210 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_01210 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT746_01215 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JT746_01220 PF01569 PAP2 superfamily JT746_01225 PF01432 Peptidase family M3 JT746_01230 PF04445 Putative SAM-dependent methyltransferase JT746_01235 PF00854 POT family JT746_01240 PF00582 Universal stress protein family JT746_01245 PF10625 Universal stress protein B (UspB) JT746_01250 PF01384 Phosphate transporter family JT746_01260 PF00072 Response regulator receiver domain JT746_01260 PF00158 Sigma-54 interaction domain JT746_01260 PF02954 Bacterial regulatory protein, Fis family JT746_01265 PF01979 Amidohydrolase family JT746_01280 PF03737 Aldolase/RraA JT746_01285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_01285 PF01842 ACT domain JT746_01285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_01295 PF00571 CBS domain JT746_01295 PF01769 Divalent cation transporter JT746_01295 PF03448 MgtE intracellular N domain JT746_01300 PF08753 NikR C terminal nickel binding domain JT746_01300 PF01402 Ribbon-helix-helix protein, copG family JT746_01305 PF00005 ABC transporter JT746_01310 PF00005 ABC transporter JT746_01315 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01320 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_01330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_01330 PF03466 LysR substrate binding domain JT746_01335 PF05870 Phenolic acid decarboxylase (PAD) JT746_01340 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JT746_01345 PF00535 Glycosyl transferase family 2 JT746_01350 PF00551 Formyl transferase JT746_01350 PF02911 Formyl transferase, C-terminal domain JT746_01350 PF01370 NAD dependent epimerase/dehydratase family JT746_01355 PF01522 Polysaccharide deacetylase JT746_01360 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JT746_01365 PF00892 EamA-like transporter family JT746_01375 PF01594 AI-2E family transporter JT746_01380 PF01648 4'-phosphopantetheinyl transferase superfamily JT746_01385 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_01385 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_01400 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_01400 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_01425 PF00535 Glycosyl transferase family 2 JT746_01435 PF13193 AMP-binding enzyme C-terminal domain JT746_01435 PF00501 AMP-binding enzyme JT746_01445 PF00550 Phosphopantetheine attachment site JT746_01450 PF00550 Phosphopantetheine attachment site JT746_01475 PF07690 Major Facilitator Superfamily JT746_01480 PF08786 DcrB JT746_01485 PF02592 Putative vitamin uptake transporter JT746_01490 PF01206 Sulfurtransferase TusA JT746_01495 PF00403 Heavy-metal-associated domain JT746_01500 PF07947 YhhN family JT746_01505 PF10694 Protein of unknown function (DUF2500) JT746_01510 PF06611 Protein of unknown function (DUF1145) JT746_01520 PF00448 SRP54-type protein, GTPase domain JT746_01520 PF02881 SRP54-type protein, helical bundle domain JT746_01525 PF00005 ABC transporter JT746_01530 PF02687 FtsX-like permease family JT746_01530 PF18075 FtsX extracellular domain JT746_01535 PF04545 Sigma-70, region 4 JT746_01535 PF04542 Sigma-70 region 2 JT746_01540 PF00155 Aminotransferase class I and II JT746_01540 PF00392 Bacterial regulatory proteins, gntR family JT746_01545 PF00202 Aminotransferase class-III JT746_01555 PF13458 Periplasmic binding protein JT746_01560 PF12568 Acetyltransferase (GNAT) domain, PanZ JT746_01565 PF13458 Periplasmic binding protein JT746_01570 PF02653 Branched-chain amino acid transport system / permease component JT746_01575 PF11862 Domain of unknown function (DUF3382) JT746_01575 PF02653 Branched-chain amino acid transport system / permease component JT746_01580 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT746_01580 PF00005 ABC transporter JT746_01585 PF00005 ABC transporter JT746_01590 PF13416 Bacterial extracellular solute-binding protein JT746_01595 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01600 PF00528 Binding-protein-dependent transport system inner membrane component JT746_01605 PF00005 ABC transporter JT746_01605 PF17912 MalK OB fold domain JT746_01610 PF03009 Glycerophosphoryl diester phosphodiesterase family JT746_01615 PF10956 Protein of unknown function (DUF2756) JT746_01625 PF00583 Acetyltransferase (GNAT) family JT746_01635 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_01635 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_01640 PF02678 Pirin JT746_01640 PF17954 Quercetinase C-terminal cupin domain JT746_01645 PF00356 Bacterial regulatory proteins, lacI family JT746_01645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_01650 PF01202 Shikimate kinase JT746_01655 PF02447 GntP family permease JT746_01665 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT746_01665 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT746_01670 PF00128 Alpha amylase, catalytic domain JT746_01670 PF02806 Alpha amylase, C-terminal all-beta domain JT746_01670 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT746_01675 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT746_01675 PF18390 Glycogen debranching enzyme C-terminal domain JT746_01675 PF00128 Alpha amylase, catalytic domain JT746_01680 PF00483 Nucleotidyl transferase JT746_01685 PF08323 Starch synthase catalytic domain JT746_01685 PF00534 Glycosyl transferases group 1 JT746_01690 PF00343 Carbohydrate phosphorylase JT746_01695 PF01266 FAD dependent oxidoreductase JT746_01695 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JT746_01700 PF00581 Rhodanese-like domain JT746_01705 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JT746_01705 PF01694 Rhomboid family JT746_01710 PF00455 DeoR C terminal sensor domain JT746_01710 PF08220 DeoR-like helix-turn-helix domain JT746_01715 PF00196 Bacterial regulatory proteins, luxR family JT746_01715 PF17874 MalT-like TPR region JT746_01720 PF00343 Carbohydrate phosphorylase JT746_01725 PF02446 4-alpha-glucanotransferase JT746_01730 PF02447 GntP family permease JT746_01735 PF01106 NifU-like domain JT746_01735 PF01521 Iron-sulphur cluster biosynthesis JT746_01740 PF00156 Phosphoribosyl transferase domain JT746_01745 PF00561 alpha/beta hydrolase fold JT746_01755 PF09012 FeoC like transcriptional regulator JT746_01760 PF07670 Nucleoside recognition JT746_01760 PF02421 Ferrous iron transport protein B JT746_01760 PF17910 FeoB cytosolic helical domain JT746_01760 PF07664 Ferrous iron transport protein B C terminus JT746_01765 PF04023 FeoA domain JT746_01770 PF00575 S1 RNA binding domain JT746_01770 PF16921 Tex protein YqgF-like domain JT746_01770 PF09371 Tex-like protein N-terminal domain JT746_01770 PF17674 HHH domain JT746_01775 PF03449 Transcription elongation factor, N-terminal JT746_01775 PF01272 Transcription elongation factor, GreA/GreB, C-term JT746_01780 PF00486 Transcriptional regulatory protein, C terminal JT746_01780 PF00072 Response regulator receiver domain JT746_01785 PF00672 HAMP domain JT746_01785 PF00512 His Kinase A (phospho-acceptor) domain JT746_01785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_01790 PF01293 Phosphoenolpyruvate carboxykinase JT746_01795 PF01430 Hsp33 protein JT746_01800 PF01479 S4 domain JT746_01805 PF13419 Haloacid dehalogenase-like hydrolase JT746_01810 PF07095 Intracellular growth attenuator protein IgaA JT746_01815 PF00293 NUDIX domain JT746_01820 PF00912 Transglycosylase JT746_01820 PF17092 Penicillin-binding protein OB-like domain JT746_01820 PF00905 Penicillin binding protein transpeptidase domain JT746_01845 PF03958 Bacterial type II/III secretion system short domain JT746_01845 PF00263 Bacterial type II and III secretion system protein JT746_01850 PF01202 Shikimate kinase JT746_01855 PF01761 3-dehydroquinate synthase JT746_01860 PF05036 Sporulation related domain JT746_01865 PF02086 D12 class N6 adenine-specific DNA methyltransferase JT746_01870 PF00834 Ribulose-phosphate 3 epimerase family JT746_01875 PF13419 Haloacid dehalogenase-like hydrolase JT746_01880 PF00579 tRNA synthetases class I (W and Y) JT746_01885 PF14824 Sirohaem biosynthesis protein central JT746_01885 PF10414 Sirohaem synthase dimerisation region JT746_01885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_01890 PF13806 Rieske-like [2Fe-2S] domain JT746_01895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_01895 PF18267 Rubredoxin NAD+ reductase C-terminal domain JT746_01895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT746_01895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT746_01895 PF04324 BFD-like [2Fe-2S] binding domain JT746_01900 PF07969 Amidohydrolase family JT746_01905 PF07690 Major Facilitator Superfamily JT746_01910 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JT746_01915 PF10832 Protein of unknown function (DUF2559) JT746_01920 PF02661 Fic/DOC family JT746_01925 PF00117 Glutamine amidotransferase class-I JT746_01930 PF00202 Aminotransferase class-III JT746_01935 PF12805 FUSC-like inner membrane protein yccS JT746_01940 PF13545 Crp-like helix-turn-helix domain JT746_01940 PF00027 Cyclic nucleotide-binding domain JT746_01945 PF02566 OsmC-like protein JT746_01950 PF00485 Phosphoribulokinase / Uridine kinase family JT746_01955 PF06794 Uncharacterised protein family (UPF0270) JT746_01960 PF00561 alpha/beta hydrolase fold JT746_01965 PF12848 ABC transporter JT746_01965 PF00005 ABC transporter JT746_01970 PF02525 Flavodoxin-like fold JT746_01975 PF00999 Sodium/hydrogen exchanger family JT746_01975 PF02254 TrkA-N domain JT746_01980 PF09526 Probable metal-binding protein (DUF2387) JT746_01985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT746_01990 PF04102 SlyX JT746_01995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JT746_01995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT746_02000 PF08348 YheO-like PAS domain JT746_02000 PF13309 HTH domain JT746_02005 PF02635 DsrE/DsrF-like family JT746_02010 PF02635 DsrE/DsrF-like family JT746_02015 PF04077 DsrH like protein JT746_02020 PF00164 Ribosomal protein S12/S23 JT746_02025 PF00177 Ribosomal protein S7p/S5e JT746_02030 PF00679 Elongation factor G C-terminus JT746_02030 PF14492 Elongation Factor G, domain II JT746_02030 PF03764 Elongation factor G, domain IV JT746_02030 PF00009 Elongation factor Tu GTP binding domain JT746_02030 PF03144 Elongation factor Tu domain 2 JT746_02035 PF03144 Elongation factor Tu domain 2 JT746_02035 PF03143 Elongation factor Tu C-terminal domain JT746_02035 PF00009 Elongation factor Tu GTP binding domain JT746_02040 PF04324 BFD-like [2Fe-2S] binding domain JT746_02045 PF00210 Ferritin-like domain JT746_02050 PF01478 Type IV leader peptidase family JT746_02055 PF00338 Ribosomal protein S10p/S20e JT746_02060 PF00297 Ribosomal protein L3 JT746_02065 PF00573 Ribosomal protein L4/L1 family JT746_02070 PF00276 Ribosomal protein L23 JT746_02075 PF03947 Ribosomal Proteins L2, C-terminal domain JT746_02075 PF00181 Ribosomal Proteins L2, RNA binding domain JT746_02080 PF00203 Ribosomal protein S19 JT746_02085 PF00237 Ribosomal protein L22p/L17e JT746_02090 PF07650 KH domain JT746_02090 PF00189 Ribosomal protein S3, C-terminal domain JT746_02095 PF00252 Ribosomal protein L16p/L10e JT746_02100 PF00831 Ribosomal L29 protein JT746_02105 PF00366 Ribosomal protein S17 JT746_02110 PF00238 Ribosomal protein L14p/L23e JT746_02115 PF00467 KOW motif JT746_02115 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JT746_02120 PF00281 Ribosomal protein L5 JT746_02120 PF00673 ribosomal L5P family C-terminus JT746_02125 PF00253 Ribosomal protein S14p/S29e JT746_02130 PF00410 Ribosomal protein S8 JT746_02135 PF00347 Ribosomal protein L6 JT746_02140 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JT746_02145 PF00333 Ribosomal protein S5, N-terminal domain JT746_02145 PF03719 Ribosomal protein S5, C-terminal domain JT746_02150 PF00327 Ribosomal protein L30p/L7e JT746_02155 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JT746_02160 PF00344 SecY translocase JT746_02165 PF00444 Ribosomal protein L36 JT746_02170 PF00416 Ribosomal protein S13/S18 JT746_02175 PF00411 Ribosomal protein S11 JT746_02180 PF01479 S4 domain JT746_02180 PF00163 Ribosomal protein S4/S9 N-terminal domain JT746_02185 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JT746_02185 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JT746_02185 PF01000 RNA polymerase Rpb3/RpoA insert domain JT746_02190 PF01196 Ribosomal protein L17 JT746_02195 PF09350 Domain of unknown function (DUF1992) JT746_02200 PF13411 MerR HTH family regulatory protein JT746_02205 PF03889 Alternative ribosome-rescue factor A JT746_02210 PF01741 Large-conductance mechanosensitive channel, MscL JT746_02215 PF02254 TrkA-N domain JT746_02215 PF02080 TrkA-C domain JT746_02220 PF01029 NusB family JT746_02220 PF01189 16S rRNA methyltransferase RsmB/F JT746_02225 PF00551 Formyl transferase JT746_02225 PF02911 Formyl transferase, C-terminal domain JT746_02230 PF01327 Polypeptide deformylase JT746_02235 PF02481 DNA recombination-mediator protein A JT746_02235 PF17782 DprA winged helix domain JT746_02240 PF04361 Protein of unknown function (DUF494) JT746_02245 PF01396 Topoisomerase DNA binding C4 zinc finger JT746_02250 PF01300 Telomere recombination JT746_02255 PF08501 Shikimate dehydrogenase substrate binding domain JT746_02255 PF01488 Shikimate / quinate 5-dehydrogenase JT746_02255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT746_02260 PF07369 Protein of unknown function (DUF1488) JT746_02265 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_02300 PF00873 AcrB/AcrD/AcrF family JT746_02305 PF00529 HlyD membrane-fusion protein of T1SS JT746_02305 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_02310 PF08361 MAATS-type transcriptional repressor, C-terminal region JT746_02310 PF00440 Bacterial regulatory proteins, tetR family JT746_02315 PF02954 Bacterial regulatory protein, Fis family JT746_02320 PF01207 Dihydrouridine synthase (Dus) JT746_02330 PF00474 Sodium:solute symporter family JT746_02335 PF06196 Protein of unknown function (DUF997) JT746_02340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT746_02340 PF00289 Biotin carboxylase, N-terminal domain JT746_02340 PF02785 Biotin carboxylase C-terminal domain JT746_02345 PF00364 Biotin-requiring enzyme JT746_02350 PF01220 Dehydroquinase class II JT746_02355 PF01794 Ferric reductase like transmembrane component JT746_02360 PF00174 Oxidoreductase molybdopterin binding domain JT746_02370 PF17157 Gammaproteobacterial periplasmic sensor domain JT746_02370 PF00990 Diguanylate cyclase, GGDEF domain JT746_02370 PF00563 EAL domain JT746_02380 PF04085 rod shape-determining protein MreC JT746_02385 PF04093 rod shape-determining protein MreD JT746_02390 PF02545 Maf-like protein JT746_02395 PF00575 S1 RNA binding domain JT746_02395 PF10150 Ribonuclease E/G family JT746_02400 PF13502 AsmA-like C-terminal region JT746_02400 PF13116 Protein of unknown function JT746_02405 PF01523 Putative modulator of DNA gyrase JT746_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_02410 PF03466 LysR substrate binding domain JT746_02415 PF07869 Protein of unknown function (DUF1656) JT746_02420 PF13533 Biotin-lipoyl like JT746_02425 PF04632 Fusaric acid resistance protein family JT746_02430 PF01337 Barstar (barnase inhibitor) JT746_02435 PF07338 Protein of unknown function (DUF1471) JT746_02440 PF07338 Protein of unknown function (DUF1471) JT746_02445 PF01316 Arginine repressor, DNA binding domain JT746_02445 PF02863 Arginine repressor, C-terminal domain JT746_02450 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JT746_02450 PF00056 lactate/malate dehydrogenase, NAD binding domain JT746_02455 PF13180 PDZ domain JT746_02460 PF13180 PDZ domain JT746_02460 PF00595 PDZ domain JT746_02465 PF06295 Protein of unknown function (DUF1043) JT746_02470 PF03969 AFG1-like ATPase JT746_02475 PF00572 Ribosomal protein L13 JT746_02480 PF00380 Ribosomal protein S9/S16 JT746_02490 PF02798 Glutathione S-transferase, N-terminal domain JT746_02490 PF00043 Glutathione S-transferase, C-terminal domain JT746_02495 PF04386 Stringent starvation protein B JT746_02500 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JT746_02505 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JT746_02505 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_02510 PF01493 GXGXG motif JT746_02510 PF01645 Conserved region in glutamate synthase JT746_02510 PF04898 Glutamate synthase central domain JT746_02510 PF00310 Glutamine amidotransferases class-II JT746_02515 PF04055 Radical SAM superfamily JT746_02515 PF16199 Radical_SAM C-terminal domain JT746_02520 PF07690 Major Facilitator Superfamily JT746_02525 PF08240 Alcohol dehydrogenase GroES-like domain JT746_02525 PF00107 Zinc-binding dehydrogenase JT746_02530 PF03786 D-mannonate dehydratase (UxuA) JT746_02535 PF00989 PAS fold JT746_02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_02535 PF00512 His Kinase A (phospho-acceptor) domain JT746_02535 PF18415 Histidine kinase receptor ArcB trans-membrane domain JT746_02535 PF01627 Hpt domain JT746_02535 PF00072 Response regulator receiver domain JT746_02545 PF00912 Transglycosylase JT746_02550 PF00381 PTS HPr component phosphorylation site JT746_02555 PF03668 P-loop ATPase protein family JT746_02560 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_02565 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JT746_02570 PF04963 Sigma-54 factor, core binding domain JT746_02570 PF00309 Sigma-54 factor, Activator interacting domain (AID) JT746_02570 PF04552 Sigma-54, DNA binding domain JT746_02575 PF00005 ABC transporter JT746_02575 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT746_02580 PF03968 OstA-like protein JT746_02585 PF06835 Lipopolysaccharide-assembly, LptC-related JT746_02595 PF01380 SIS domain JT746_02595 PF00571 CBS domain JT746_02600 PF01699 Sodium/calcium exchanger protein JT746_02605 PF00005 ABC transporter JT746_02610 PF02405 Permease MlaE JT746_02615 PF02470 MlaD protein JT746_02620 PF05494 MlaC protein JT746_02625 PF13466 STAS domain JT746_02630 PF01722 BolA-like protein JT746_02635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JT746_02640 PF13693 Winged helix-turn-helix DNA-binding JT746_02645 PF00348 Polyprenyl synthetase JT746_02650 PF00829 Ribosomal prokaryotic L21 protein JT746_02655 PF01016 Ribosomal L27 protein JT746_02660 PF00892 EamA-like transporter family JT746_02665 PF01018 GTP1/OBG JT746_02665 PF01926 50S ribosome-binding GTPase JT746_02670 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JT746_02675 PF03449 Transcription elongation factor, N-terminal JT746_02675 PF01272 Transcription elongation factor, GreA/GreB, C-term JT746_02680 PF01985 CRS1 / YhbY (CRM) domain JT746_02685 PF01728 FtsJ-like methyltransferase JT746_02690 PF06480 FtsH Extracellular JT746_02690 PF01434 Peptidase family M41 JT746_02690 PF00004 ATPase family associated with various cellular activities (AAA) JT746_02690 PF17862 AAA+ lid domain JT746_02695 PF00809 Pterin binding enzyme JT746_02700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT746_02700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT746_02700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT746_02700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT746_02705 PF03840 Preprotein translocase SecG subunit JT746_02720 PF07437 YfaZ precursor JT746_02725 PF15977 Winged helix-turn-helix DNA binding JT746_02730 PF00764 Arginosuccinate synthase JT746_02740 PF17384 RimP C-terminal SH3 domain JT746_02740 PF02576 RimP N-terminal domain JT746_02745 PF00575 S1 RNA binding domain JT746_02745 PF08529 NusA N-terminal domain JT746_02745 PF13184 NusA-like KH domain JT746_02750 PF04760 Translation initiation factor IF-2, N-terminal region JT746_02750 PF11987 Translation-initiation factor 2 JT746_02750 PF08364 Bacterial translation initiation factor IF-2 associated region JT746_02750 PF00009 Elongation factor Tu GTP binding domain JT746_02755 PF02033 Ribosome-binding factor A JT746_02760 PF01509 TruB family pseudouridylate synthase (N terminal domain) JT746_02760 PF16198 tRNA pseudouridylate synthase B C-terminal domain JT746_02760 PF09157 Pseudouridine synthase II TruB, C-terminal JT746_02765 PF00312 Ribosomal protein S15 JT746_02770 PF00013 KH domain JT746_02770 PF03725 3' exoribonuclease family, domain 2 JT746_02770 PF01138 3' exoribonuclease family, domain 1 JT746_02770 PF00575 S1 RNA binding domain JT746_02770 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JT746_02775 PF13181 Tetratricopeptide repeat JT746_02775 PF07719 Tetratricopeptide repeat JT746_02785 PF03880 DbpA RNA binding domain JT746_02785 PF12343 Cold shock protein DEAD box A JT746_02785 PF00270 DEAD/DEAH box helicase JT746_02785 PF00271 Helicase conserved C-terminal domain JT746_02790 PF03222 Tryptophan/tyrosine permease family JT746_02795 PF03466 LysR substrate binding domain JT746_02795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_02815 PF00682 HMGL-like JT746_02815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT746_02815 PF00364 Biotin-requiring enzyme JT746_02815 PF02436 Conserved carboxylase domain JT746_02815 PF02785 Biotin carboxylase C-terminal domain JT746_02815 PF00289 Biotin carboxylase, N-terminal domain JT746_02835 PF01039 Carboxyl transferase domain JT746_02840 PF06857 Malonate decarboxylase delta subunit (MdcD) JT746_02845 PF16957 Malonate decarboxylase, alpha subunit, transporter JT746_02850 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JT746_02855 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT746_02860 PF00296 Luciferase-like monooxygenase JT746_02865 PF01136 Peptidase family U32 JT746_02870 PF01136 Peptidase family U32 JT746_02875 PF02036 SCP-2 sterol transfer family JT746_02880 PF13508 Acetyltransferase (GNAT) domain JT746_02885 PF01541 GIY-YIG catalytic domain JT746_02895 PF01965 DJ-1/PfpI family JT746_02900 PF13460 NAD(P)H-binding JT746_02905 PF03773 Predicted permease JT746_02910 PF04972 BON domain JT746_02915 PF13580 SIS domain JT746_02920 PF02021 Uncharacterised protein family UPF0102 JT746_02925 PF04348 LppC putative lipoprotein JT746_02930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_02935 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JT746_02935 PF08666 SAF domain JT746_02940 PF03328 HpcH/HpaI aldolase/citrate lyase family JT746_02945 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT746_02945 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT746_02955 PF05552 Conserved TM helix JT746_02955 PF00924 Mechanosensitive ion channel JT746_02970 PF02678 Pirin JT746_02970 PF17954 Quercetinase C-terminal cupin domain JT746_02975 PF03466 LysR substrate binding domain JT746_02975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_02980 PF05656 Protein of unknown function (DUF805) JT746_02985 PF13409 Glutathione S-transferase, N-terminal domain JT746_02990 PF07681 DoxX JT746_02995 PF13997 YqjK-like protein JT746_03000 PF07332 Putative Actinobacterial Holin-X, holin superfamily III JT746_03005 PF05957 Bacterial protein of unknown function (DUF883) JT746_03010 PF06476 Protein of unknown function (DUF1090) JT746_03015 PF13721 SecD export protein N-terminal TM region JT746_03020 PF09335 SNARE associated Golgi protein JT746_03025 PF00392 Bacterial regulatory proteins, gntR family JT746_03025 PF07729 FCD domain JT746_03030 PF07690 Major Facilitator Superfamily JT746_03035 PF02614 Glucuronate isomerase JT746_03040 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JT746_03040 PF08666 SAF domain JT746_03045 PF10688 Bacterial inner membrane protein JT746_03050 PF00375 Sodium:dicarboxylate symporter family JT746_03055 PF03741 Integral membrane protein TerC family JT746_03060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_03065 PF01863 Protein of unknown function DUF45 JT746_03080 PF05175 Methyltransferase small domain JT746_03085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT746_03085 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_03090 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_03090 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_03095 PF04198 Putative sugar-binding domain JT746_03100 PF00005 ABC transporter JT746_03105 PF02653 Branched-chain amino acid transport system / permease component JT746_03110 PF02653 Branched-chain amino acid transport system / permease component JT746_03115 PF13407 Periplasmic binding protein domain JT746_03120 PF01791 DeoC/LacD family aldolase JT746_03125 PF03992 Antibiotic biosynthesis monooxygenase JT746_03130 PF00202 Aminotransferase class-III JT746_03135 PF03551 Transcriptional regulator PadR-like family JT746_03140 PF08021 Siderophore-interacting FAD-binding domain JT746_03140 PF04954 Siderophore-interacting protein JT746_03145 PF02734 DAK2 domain JT746_03145 PF02733 Dak1 domain JT746_03150 PF00391 PEP-utilising enzyme, mobile domain JT746_03150 PF05524 PEP-utilising enzyme, N-terminal JT746_03150 PF00381 PTS HPr component phosphorylation site JT746_03150 PF03610 PTS system fructose IIA component JT746_03155 PF02734 DAK2 domain JT746_03160 PF02733 Dak1 domain JT746_03165 PF00465 Iron-containing alcohol dehydrogenase JT746_03170 PF02954 Bacterial regulatory protein, Fis family JT746_03170 PF00989 PAS fold JT746_03170 PF00158 Sigma-54 interaction domain JT746_03175 PF01923 Cobalamin adenosyltransferase JT746_03180 PF02288 Dehydratase medium subunit JT746_03185 PF00465 Iron-containing alcohol dehydrogenase JT746_03190 PF03928 Haem-degrading JT746_03195 PF02286 Dehydratase large subunit JT746_03200 PF02288 Dehydratase medium subunit JT746_03205 PF02287 Dehydratase small subunit JT746_03210 PF18427 DD-reactivating factor swiveling domain JT746_03210 PF08841 Diol dehydratase reactivase ATPase-like domain JT746_03215 PF00230 Major intrinsic protein JT746_03220 PF06411 HdeA/HdeB family JT746_03225 PF03729 Short repeat of unknown function (DUF308) JT746_03230 PF10938 YfdX protein JT746_03235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_03235 PF00512 His Kinase A (phospho-acceptor) domain JT746_03235 PF01627 Hpt domain JT746_03235 PF00072 Response regulator receiver domain JT746_03235 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_03240 PF00196 Bacterial regulatory proteins, luxR family JT746_03240 PF00072 Response regulator receiver domain JT746_03260 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JT746_03265 PF01925 Sulfite exporter TauE/SafE JT746_03275 PF00589 Phage integrase family JT746_03275 PF02899 Phage integrase, N-terminal SAM-like domain JT746_03280 PF07022 Bacteriophage CI repressor helix-turn-helix domain JT746_03280 PF16452 Bacteriophage CI repressor C-terminal domain JT746_03290 PF06892 Phage regulatory protein CII (CP76) JT746_03300 PF17282 Family of unknown function (DUF5347) JT746_03320 PF05840 Bacteriophage replication gene A protein (GPA) JT746_03480 PF04606 Ogr/Delta-like zinc finger JT746_03490 PF03167 Uracil DNA glycosylase superfamily JT746_03495 PF00140 Sigma-70 factor, region 1.2 JT746_03495 PF04546 Sigma-70, non-essential region JT746_03495 PF04545 Sigma-70, region 4 JT746_03495 PF04539 Sigma-70 region 3 JT746_03495 PF04542 Sigma-70 region 2 JT746_03495 PF03979 Sigma-70 factor, region 1.1 JT746_03500 PF08278 DNA primase DnaG DnaB-binding JT746_03500 PF10410 DnaB-helicase binding domain of primase JT746_03500 PF08275 DNA primase catalytic core, N-terminal domain JT746_03500 PF01807 CHC2 zinc finger JT746_03505 PF01165 Ribosomal protein S21 JT746_03510 PF00814 Glycoprotease family JT746_03520 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT746_03525 PF01730 UreF JT746_03530 PF05194 UreE urease accessory protein, C-terminal domain JT746_03530 PF02814 UreE urease accessory protein, N-terminal domain JT746_03535 PF00449 Urease alpha-subunit, N-terminal domain JT746_03535 PF01979 Amidohydrolase family JT746_03540 PF00699 Urease beta subunit JT746_03545 PF00547 Urease, gamma subunit JT746_03550 PF01774 UreD urease accessory protein JT746_03560 PF02660 Glycerol-3-phosphate acyltransferase JT746_03565 PF02152 Dihydroneopterin aldolase JT746_03570 PF02673 Bacitracin resistance protein BacA JT746_03575 PF01966 HD domain JT746_03575 PF01743 Poly A polymerase head domain JT746_03575 PF12627 Probable RNA and SrmB- binding site of polymerase A JT746_03580 PF08239 Bacterial SH3 domain JT746_03585 PF01928 CYTH domain JT746_03590 PF03710 Glutamate-ammonia ligase adenylyltransferase JT746_03590 PF08335 GlnD PII-uridylyltransferase JT746_03595 PF01467 Cytidylyltransferase-like JT746_03595 PF00294 pfkB family carbohydrate kinase JT746_03605 PF08971 Glycogen synthesis protein JT746_03610 PF04380 Membrane fusogenic activity JT746_03615 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JT746_03620 PF02535 ZIP Zinc transporter JT746_03625 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT746_03630 PF03738 Glutathionylspermidine synthase preATP-grasp JT746_03635 PF06693 Protein of unknown function (DUF1190) JT746_03640 PF02321 Outer membrane efflux protein JT746_03645 PF00293 NUDIX domain JT746_03650 PF06853 Protein of unknown function (DUF1249) JT746_03655 PF00149 Calcineurin-like phosphoesterase JT746_03660 PF05728 Uncharacterised protein family (UPF0227) JT746_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_03665 PF00986 DNA gyrase B subunit, carboxyl terminus JT746_03665 PF01751 Toprim domain JT746_03665 PF00204 DNA gyrase B JT746_03670 PF03992 Antibiotic biosynthesis monooxygenase JT746_03675 PF02525 Flavodoxin-like fold JT746_03680 PF00512 His Kinase A (phospho-acceptor) domain JT746_03680 PF08521 Two-component sensor kinase N-terminal JT746_03680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_03685 PF00072 Response regulator receiver domain JT746_03685 PF00486 Transcriptional regulatory protein, C terminal JT746_03690 PF04076 Bacterial OB fold (BOF) protein JT746_03695 PF06445 GyrI-like small molecule binding domain JT746_03700 PF03989 DNA gyrase C-terminal domain, beta-propeller JT746_03700 PF00521 DNA gyrase/topoisomerase IV, subunit A JT746_03705 PF01553 Acyltransferase JT746_03710 PF00394 Multicopper oxidase JT746_03710 PF07732 Multicopper oxidase JT746_03710 PF07731 Multicopper oxidase JT746_03715 PF11842 Domain of unknown function (DUF3362) JT746_03715 PF08497 Radical SAM N-terminal JT746_03715 PF04055 Radical SAM superfamily JT746_03720 PF00248 Aldo/keto reductase family JT746_03725 PF00465 Iron-containing alcohol dehydrogenase JT746_03730 PF06719 AraC-type transcriptional regulator N-terminus JT746_03730 PF12833 Helix-turn-helix domain JT746_03735 PF09335 SNARE associated Golgi protein JT746_03740 PF01053 Cys/Met metabolism PLP-dependent enzyme JT746_03745 PF01618 MotA/TolQ/ExbB proton channel family JT746_03750 PF02472 Biopolymer transport protein ExbD/TolR JT746_03755 PF03350 Uncharacterized protein family, UPF0114 JT746_03760 PF01738 Dienelactone hydrolase family JT746_03765 PF02798 Glutathione S-transferase, N-terminal domain JT746_03780 PF05257 CHAP domain JT746_03780 PF03738 Glutathionylspermidine synthase preATP-grasp JT746_03785 PF00155 Aminotransferase class I and II JT746_03805 PF03466 LysR substrate binding domain JT746_03805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_03810 PF01053 Cys/Met metabolism PLP-dependent enzyme JT746_03815 PF00291 Pyridoxal-phosphate dependent enzyme JT746_03815 PF00571 CBS domain JT746_03825 PF04474 Protein of unknown function (DUF554) JT746_03830 PF01276 Orn/Lys/Arg decarboxylase, major domain JT746_03830 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT746_03830 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT746_03835 PF03825 Nucleoside H+ symporter JT746_03840 PF01464 Transglycosylase SLT domain JT746_03840 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JT746_03845 PF04362 Bacterial Fe(2+) trafficking JT746_03850 PF10576 Iron-sulfur binding domain of endonuclease III JT746_03850 PF00633 Helix-hairpin-helix motif JT746_03850 PF00730 HhH-GPD superfamily base excision DNA repair protein JT746_03850 PF14815 NUDIX domain JT746_03855 PF02390 Putative methyltransferase JT746_03860 PF04320 Protein with unknown function (DUF469) JT746_03865 PF11101 Protein of unknown function (DUF2884) JT746_03870 PF06717 Protein of unknown function (DUF1202) JT746_03875 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JT746_03880 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JT746_03885 PF03480 Bacterial extracellular solute-binding protein, family 7 JT746_03890 PF06969 HemN C-terminal domain JT746_03890 PF04055 Radical SAM superfamily JT746_03895 PF01725 Ham1 family JT746_03900 PF02594 Uncharacterised ACR, YggU family COG1872 JT746_03905 PF02325 YGGT family JT746_03910 PF01168 Alanine racemase, N-terminal domain JT746_03915 PF00437 Type II/IV secretion system protein JT746_03920 PF00196 Bacterial regulatory proteins, luxR family JT746_03925 PF03652 Holliday junction resolvase JT746_03930 PF02622 Uncharacterized ACR, COG1678 JT746_03935 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JT746_03935 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JT746_03940 PF04452 RNA methyltransferase JT746_03945 PF04231 Endonuclease I JT746_03950 PF10263 SprT-like family JT746_03950 PF17283 SprT-like zinc ribbon domain JT746_03955 PF00083 Sugar (and other) transporter JT746_03960 PF02772 S-adenosylmethionine synthetase, central domain JT746_03960 PF02773 S-adenosylmethionine synthetase, C-terminal domain JT746_03960 PF00438 S-adenosylmethionine synthetase, N-terminal domain JT746_03980 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JT746_03980 PF17944 Arginine decarboxylase C-terminal helical extension JT746_03980 PF17810 Arginine decarboxylase helical bundle domain JT746_03985 PF00491 Arginase family JT746_03990 PF03573 outer membrane porin, OprD family JT746_03995 PF01435 Peptidase family M48 JT746_04000 PF02779 Transketolase, pyrimidine binding domain JT746_04000 PF00456 Transketolase, thiamine diphosphate binding domain JT746_04000 PF02780 Transketolase, C-terminal domain JT746_04005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT746_04005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT746_04010 PF00162 Phosphoglycerate kinase JT746_04015 PF01116 Fructose-bisphosphate aldolase class-II JT746_04020 PF00924 Mechanosensitive ion channel JT746_04020 PF05552 Conserved TM helix JT746_04025 PF01810 LysE type translocator JT746_04030 PF04402 Protein of unknown function (DUF541) JT746_04035 PF03466 LysR substrate binding domain JT746_04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_04040 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JT746_04045 PF01842 ACT domain JT746_04045 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_04045 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_04050 PF01812 5-formyltetrahydrofolate cyclo-ligase family JT746_04060 PF05164 Cell division protein ZapA JT746_04065 PF03695 Uncharacterised protein family (UPF0149) JT746_04070 PF00557 Metallopeptidase family M24 JT746_04070 PF05195 Aminopeptidase P, N-terminal domain JT746_04075 PF01494 FAD binding domain JT746_04080 PF01494 FAD binding domain JT746_04085 PF08669 Glycine cleavage T-protein C-terminal barrel domain JT746_04085 PF01571 Aminomethyltransferase folate-binding domain JT746_04090 PF01597 Glycine cleavage H-protein JT746_04095 PF02347 Glycine cleavage system P-protein JT746_04105 PF00578 AhpC/TSA family JT746_04125 PF00232 Glycosyl hydrolase family 1 JT746_04130 PF01380 SIS domain JT746_04130 PF01418 Helix-turn-helix domain, rpiR family JT746_04135 PF04266 ASCH domain JT746_04140 PF03006 Haemolysin-III related JT746_04145 PF01571 Aminomethyltransferase folate-binding domain JT746_04150 PF03937 Flavinator of succinate dehydrogenase JT746_04155 PF07254 Membrane-bound toxin component of toxin-antitoxin system JT746_04160 PF00258 Flavodoxin JT746_04165 PF00589 Phage integrase family JT746_04165 PF02899 Phage integrase, N-terminal SAM-like domain JT746_04170 PF10411 Disulfide bond isomerase protein N-terminus JT746_04170 PF13098 Thioredoxin-like domain JT746_04175 PF02272 DHHA1 domain JT746_04175 PF17768 RecJ OB domain JT746_04175 PF01368 DHH family JT746_04185 PF00152 tRNA synthetases class II (D, K and N) JT746_04185 PF01336 OB-fold nucleic acid binding domain JT746_04190 PF00293 NUDIX domain JT746_04195 PF01551 Peptidase family M23 JT746_04195 PF01476 LysM domain JT746_04205 PF07690 Major Facilitator Superfamily JT746_04210 PF03466 LysR substrate binding domain JT746_04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_04235 PF01022 Bacterial regulatory protein, arsR family JT746_04240 PF02040 Arsenical pump membrane protein JT746_04245 PF03960 ArsC family JT746_04250 PF00854 POT family JT746_04255 PF08986 Domain of unknown function (DUF1889) JT746_04260 PF02321 Outer membrane efflux protein JT746_04265 PF04632 Fusaric acid resistance protein family JT746_04270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_04270 PF00529 HlyD membrane-fusion protein of T1SS JT746_04275 PF17090 Uncharacterised protein family JT746_04280 PF06902 Divergent 4Fe-4S mono-cluster JT746_04285 PF14542 GCN5-related N-acetyl-transferase JT746_04290 PF09160 FimH, mannose binding JT746_04290 PF00419 Fimbrial protein JT746_04300 PF00419 Fimbrial protein JT746_04305 PF00577 Outer membrane usher protein JT746_04305 PF13954 PapC N-terminal domain JT746_04305 PF13953 PapC C-terminal domain JT746_04310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_04310 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_04315 PF00419 Fimbrial protein JT746_04320 PF00419 Fimbrial protein JT746_04325 PF00589 Phage integrase family JT746_04330 PF00589 Phage integrase family JT746_04345 PF03824 High-affinity nickel-transport protein JT746_04350 PF01047 MarR family JT746_04355 PF00892 EamA-like transporter family JT746_04365 PF00419 Fimbrial protein JT746_04370 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_04370 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_04375 PF00577 Outer membrane usher protein JT746_04375 PF13954 PapC N-terminal domain JT746_04375 PF13953 PapC C-terminal domain JT746_04380 PF00419 Fimbrial protein JT746_04395 PF00072 Response regulator receiver domain JT746_04395 PF00196 Bacterial regulatory proteins, luxR family JT746_04410 PF03222 Tryptophan/tyrosine permease family JT746_04420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_04420 PF03466 LysR substrate binding domain JT746_04425 PF02803 Thiolase, C-terminal domain JT746_04425 PF00108 Thiolase, N-terminal domain JT746_04430 PF06178 Oligogalacturonate-specific porin protein (KdgM) JT746_04435 PF14583 Oligogalacturonate lyase JT746_04445 PF00083 Sugar (and other) transporter JT746_04450 PF00356 Bacterial regulatory proteins, lacI family JT746_04450 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_04460 PF01306 LacY proton/sugar symporter JT746_04465 PF08244 Glycosyl hydrolases family 32 C terminal JT746_04465 PF00251 Glycosyl hydrolases family 32 N-terminal domain JT746_04480 PF17912 MalK OB fold domain JT746_04480 PF00005 ABC transporter JT746_04485 PF00528 Binding-protein-dependent transport system inner membrane component JT746_04490 PF00528 Binding-protein-dependent transport system inner membrane component JT746_04500 PF16867 Dimethlysulfonioproprionate lyase JT746_04505 PF01177 Asp/Glu/Hydantoin racemase JT746_04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_04510 PF03466 LysR substrate binding domain JT746_04515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JT746_04515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JT746_04520 PF00356 Bacterial regulatory proteins, lacI family JT746_04525 PF02378 Phosphotransferase system, EIIC JT746_04530 PF00232 Glycosyl hydrolase family 1 JT746_04535 PF07729 FCD domain JT746_04535 PF00392 Bacterial regulatory proteins, gntR family JT746_04545 PF00356 Bacterial regulatory proteins, lacI family JT746_04555 PF01553 Acyltransferase JT746_04555 PF00501 AMP-binding enzyme JT746_04560 PF07690 Major Facilitator Superfamily JT746_04565 PF00248 Aldo/keto reductase family JT746_04570 PF06004 Bacterial protein of unknown function (DUF903) JT746_04575 PF03741 Integral membrane protein TerC family JT746_04580 PF02976 DNA mismatch repair enzyme MutH JT746_04590 PF00293 NUDIX domain JT746_04595 PF00391 PEP-utilising enzyme, mobile domain JT746_04595 PF05524 PEP-utilising enzyme, N-terminal JT746_04595 PF02896 PEP-utilising enzyme, TIM barrel domain JT746_04595 PF01590 GAF domain JT746_04600 PF01790 Prolipoprotein diacylglyceryl transferase JT746_04605 PF00303 Thymidylate synthase JT746_04610 PF07963 Prokaryotic N-terminal methylation motif JT746_04615 PF07963 Prokaryotic N-terminal methylation motif JT746_04620 PF10713 Protein of unknown function (DUF2509) JT746_04625 PF07963 Prokaryotic N-terminal methylation motif JT746_04625 PF12528 Type II secretion prepilin peptidase dependent protein C JT746_04630 PF17946 RecC C-terminal domain JT746_04635 PF05193 Peptidase M16 inactive domain JT746_04635 PF16187 Middle or third domain of peptidase_M16 JT746_04635 PF00675 Insulinase (Peptidase family M16) JT746_04640 PF12705 PD-(D/E)XK nuclease superfamily JT746_04640 PF00580 UvrD/REP helicase N-terminal domain JT746_04640 PF13361 UvrD-like helicase C-terminal domain JT746_04645 PF13538 UvrD-like helicase C-terminal domain JT746_04650 PF00583 Acetyltransferase (GNAT) family JT746_04650 PF00696 Amino acid kinase family JT746_04655 PF11741 AMIN domain JT746_04655 PF01520 N-acetylmuramoyl-L-alanine amidase JT746_04660 PF00155 Aminotransferase class I and II JT746_04665 PF00288 GHMP kinases N terminal domain JT746_04670 PF00871 Acetokinase family JT746_04675 PF10662 Ethanolamine utilisation - propanediol utilisation JT746_04680 PF00936 BMC domain JT746_04690 PF13375 RnfC Barrel sandwich hybrid domain JT746_04690 PF10531 SLBB domain JT746_04690 PF13237 4Fe-4S dicluster domain JT746_04690 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT746_04695 PF00171 Aldehyde dehydrogenase family JT746_04695 PF00465 Iron-containing alcohol dehydrogenase JT746_04700 PF00171 Aldehyde dehydrogenase family JT746_04705 PF01923 Cobalamin adenosyltransferase JT746_04710 PF03319 Ethanolamine utilisation protein EutN/carboxysome JT746_04720 PF06130 Phosphate propanoyltransferase JT746_04725 PF00936 BMC domain JT746_04730 PF00936 BMC domain JT746_04740 PF18427 DD-reactivating factor swiveling domain JT746_04740 PF08841 Diol dehydratase reactivase ATPase-like domain JT746_04745 PF02287 Dehydratase small subunit JT746_04750 PF02288 Dehydratase medium subunit JT746_04755 PF02286 Dehydratase large subunit JT746_04760 PF00936 BMC domain JT746_04765 PF00936 BMC domain JT746_04770 PF00230 Major intrinsic protein JT746_04775 PF12833 Helix-turn-helix domain JT746_04775 PF10114 Sensory domain found in PocR JT746_04780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT746_04780 PF07685 CobB/CobQ-like glutamine amidotransferase domain JT746_04785 PF03186 CobD/Cbib protein JT746_04790 PF02570 Precorrin-8X methylmutase JT746_04795 PF01888 CbiD JT746_04800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_04805 PF05175 Methyltransferase small domain JT746_04810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_04815 PF11760 Cobalamin synthesis G N-terminal JT746_04815 PF11761 Cobalamin biosynthesis central region JT746_04815 PF01890 Cobalamin synthesis G C-terminus JT746_04820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_04825 PF02571 Precorrin-6x reductase CbiJ/CobK JT746_04830 PF06180 Cobalt chelatase (CbiK) JT746_04835 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_04840 PF01891 Cobalt uptake substrate-specific transmembrane region JT746_04845 PF02553 Cobalt transport protein component CbiN JT746_04850 PF02361 Cobalt transport protein JT746_04855 PF00005 ABC transporter JT746_04860 PF07685 CobB/CobQ-like glutamine amidotransferase domain JT746_04865 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JT746_04870 PF02277 Phosphoribosyltransferase JT746_04890 PF03562 MltA specific insert domain JT746_04890 PF06725 3D domain JT746_04895 PF00899 ThiF family JT746_04900 PF02657 Fe-S metabolism associated domain JT746_04905 PF00266 Aminotransferase class-V JT746_04910 PF06004 Bacterial protein of unknown function (DUF903) JT746_04915 PF03466 LysR substrate binding domain JT746_04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_04920 PF04241 Protein of unknown function (DUF423) JT746_04925 PF01728 FtsJ-like methyltransferase JT746_04925 PF18125 RlmM ferredoxin-like domain JT746_04930 PF00455 DeoR C terminal sensor domain JT746_04930 PF08220 DeoR-like helix-turn-helix domain JT746_04935 PF05025 RbsD / FucU transport protein family JT746_04940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_04940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_04945 PF07882 L-fucose isomerase, second N-terminal domain JT746_04945 PF02952 L-fucose isomerase, C-terminal domain JT746_04945 PF07881 L-fucose isomerase, first N-terminal domain JT746_04950 PF07690 Major Facilitator Superfamily JT746_04955 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_04960 PF00465 Iron-containing alcohol dehydrogenase JT746_04965 PF01367 5'-3' exonuclease, C-terminal SAM fold JT746_04965 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JT746_04970 PF00158 Sigma-54 interaction domain JT746_04980 PF00296 Luciferase-like monooxygenase JT746_04990 PF00296 Luciferase-like monooxygenase JT746_04995 PF00005 ABC transporter JT746_05000 PF00528 Binding-protein-dependent transport system inner membrane component JT746_05005 PF03180 NLPA lipoprotein JT746_05010 PF07690 Major Facilitator Superfamily JT746_05025 PF03315 Serine dehydratase beta chain JT746_05025 PF03313 Serine dehydratase alpha chain JT746_05035 PF11892 Domain of unknown function (DUF3412) JT746_05035 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JT746_05035 PF03641 Possible lysine decarboxylase JT746_05040 PF14489 QueF-like protein JT746_05040 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JT746_05045 PF07348 Syd protein (SUKH-2) JT746_05050 PF04287 tRNA pseudouridine synthase C JT746_05055 PF00849 RNA pseudouridylate synthase JT746_05060 PF00258 Flavodoxin JT746_05065 PF07690 Major Facilitator Superfamily JT746_05070 PF13378 Enolase C-terminal domain-like JT746_05070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT746_05075 PF13378 Enolase C-terminal domain-like JT746_05080 PF02595 Glycerate kinase family JT746_05085 PF00672 HAMP domain JT746_05085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_05085 PF01627 Hpt domain JT746_05085 PF00512 His Kinase A (phospho-acceptor) domain JT746_05085 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JT746_05085 PF00072 Response regulator receiver domain JT746_05090 PF01938 TRAM domain JT746_05090 PF05958 tRNA (Uracil-5-)-methyltransferase JT746_05095 PF02824 TGS domain JT746_05095 PF13291 ACT domain JT746_05095 PF04607 Region found in RelA / SpoT proteins JT746_05100 PF03819 MazG nucleotide pyrophosphohydrolase domain JT746_05105 PF00117 Glutamine amidotransferase class-I JT746_05105 PF06418 CTP synthase N-terminus JT746_05110 PF03952 Enolase, N-terminal domain JT746_05110 PF00113 Enolase, C-terminal TIM barrel domain JT746_05120 PF04055 Radical SAM superfamily JT746_05125 PF01242 6-pyruvoyl tetrahydropterin synthase JT746_05130 PF00175 Oxidoreductase NAD-binding domain JT746_05130 PF00258 Flavodoxin JT746_05130 PF00667 FAD binding domain JT746_05135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT746_05135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT746_05140 PF01507 Phosphoadenosine phosphosulfate reductase family JT746_05145 PF04389 Peptidase family M28 JT746_05150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JT746_05150 PF10414 Sirohaem synthase dimerisation region JT746_05150 PF14824 Sirohaem biosynthesis protein central JT746_05155 PF01507 Phosphoadenosine phosphosulfate reductase family JT746_05160 PF00009 Elongation factor Tu GTP binding domain JT746_05170 PF12084 Protein of unknown function (DUF3561) JT746_05175 PF04977 Septum formation initiator JT746_05180 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JT746_05185 PF02542 YgbB family JT746_05190 PF01142 tRNA pseudouridine synthase D (TruD) JT746_05195 PF01975 Survival protein SurE JT746_05205 PF01476 LysM domain JT746_05205 PF01551 Peptidase family M23 JT746_05210 PF04539 Sigma-70 region 3 JT746_05210 PF04542 Sigma-70 region 2 JT746_05210 PF04545 Sigma-70, region 4 JT746_05210 PF00140 Sigma-70 factor, region 1.2 JT746_05220 PF07690 Major Facilitator Superfamily JT746_05225 PF03466 LysR substrate binding domain JT746_05225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_05230 PF01047 MarR family JT746_05235 PF02441 Flavoprotein JT746_05240 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT746_05250 PF01848 Hok/gef family JT746_05255 PF01624 MutS domain I JT746_05255 PF05188 MutS domain II JT746_05255 PF05192 MutS domain III JT746_05255 PF05190 MutS family domain IV JT746_05255 PF00488 MutS domain V JT746_05270 PF00005 ABC transporter JT746_05275 PF01032 FecCD transport family JT746_05280 PF01497 Periplasmic binding protein JT746_05285 PF05171 Haemin-degrading HemS.ChuX domain JT746_05290 PF00593 TonB dependent receptor JT746_05290 PF07715 TonB-dependent Receptor Plug Domain JT746_05300 PF11756 Nitrous oxide-stimulated promoter JT746_05305 PF00950 ABC 3 transport family JT746_05310 PF00950 ABC 3 transport family JT746_05315 PF00005 ABC transporter JT746_05320 PF01297 Zinc-uptake complex component A periplasmic JT746_05325 PF00356 Bacterial regulatory proteins, lacI family JT746_05330 PF00480 ROK family JT746_05335 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT746_05340 PF02378 Phosphotransferase system, EIIC JT746_05345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_05350 PF02378 Phosphotransferase system, EIIC JT746_05355 PF02264 LamB porin JT746_05365 PF00232 Glycosyl hydrolase family 1 JT746_05370 PF01590 GAF domain JT746_05370 PF02954 Bacterial regulatory protein, Fis family JT746_05370 PF00158 Sigma-54 interaction domain JT746_05375 PF02769 AIR synthase related protein, C-terminal domain JT746_05375 PF00586 AIR synthase related protein, N-terminal domain JT746_05380 PF01924 Hydrogenase formation hypA family JT746_05385 PF01455 HupF/HypC family JT746_05390 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT746_05395 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA JT746_05400 PF11046 Transcriptional repressor of hyc and hyp operons JT746_05405 PF13247 4Fe-4S dicluster domain JT746_05410 PF00361 Proton-conducting membrane transporter JT746_05415 PF00146 NADH dehydrogenase JT746_05420 PF00374 Nickel-dependent hydrogenase JT746_05420 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JT746_05420 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JT746_05425 PF12838 4Fe-4S dicluster domain JT746_05430 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JT746_05435 PF07450 Formate hydrogenlyase maturation protein HycH JT746_05440 PF01750 Hydrogenase maturation protease JT746_05445 PF08845 Toxin SymE, type I toxin-antitoxin system JT746_05450 PF00232 Glycosyl hydrolase family 1 JT746_05455 PF00367 phosphotransferase system, EIIB JT746_05455 PF02378 Phosphotransferase system, EIIC JT746_05465 PF00356 Bacterial regulatory proteins, lacI family JT746_05470 PF13247 4Fe-4S dicluster domain JT746_05470 PF12800 4Fe-4S binding domain JT746_05475 PF07503 HypF finger JT746_05475 PF01300 Telomere recombination JT746_05475 PF17788 HypF Kae1-like domain JT746_05475 PF00708 Acylphosphatase JT746_05480 PF03824 High-affinity nickel-transport protein JT746_05490 PF07690 Major Facilitator Superfamily JT746_05495 PF07690 Major Facilitator Superfamily JT746_05500 PF09339 IclR helix-turn-helix domain JT746_05500 PF01614 Bacterial transcriptional regulator JT746_05505 PF03737 Aldolase/RraA JT746_05510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_05510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_05510 PF01842 ACT domain JT746_05515 PF18113 Rubredoxin binding C-terminal domain JT746_05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_05520 PF00301 Rubredoxin JT746_05520 PF00753 Metallo-beta-lactamase superfamily JT746_05520 PF00258 Flavodoxin JT746_05525 PF00158 Sigma-54 interaction domain JT746_05525 PF01590 GAF domain JT746_05530 PF00571 CBS domain JT746_05530 PF01380 SIS domain JT746_05535 PF08220 DeoR-like helix-turn-helix domain JT746_05535 PF00455 DeoR C terminal sensor domain JT746_05540 PF06923 Glucitol operon activator protein (GutM) JT746_05545 PF00106 short chain dehydrogenase JT746_05550 PF03829 PTS system glucitol/sorbitol-specific IIA component JT746_05555 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JT746_05555 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JT746_05560 PF03608 PTS system enzyme II sorbitol-specific factor JT746_05565 PF13406 Transglycosylase SLT domain JT746_05570 PF00005 ABC transporter JT746_05575 PF00950 ABC 3 transport family JT746_05580 PF01297 Zinc-uptake complex component A periplasmic JT746_05585 PF02464 Competence-damaged protein JT746_05590 PF00154 recA bacterial DNA recombination protein JT746_05595 PF02631 RecX family JT746_05600 PF02272 DHHA1 domain JT746_05600 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT746_05600 PF01411 tRNA synthetases class II (A) JT746_05605 PF02599 Global regulator protein family JT746_05635 PF04972 BON domain JT746_05640 PF13419 Haloacid dehalogenase-like hydrolase JT746_05645 PF09335 SNARE associated Golgi protein JT746_05650 PF04262 Glutamate-cysteine ligase JT746_05655 PF02664 S-Ribosylhomocysteinase (LuxS) JT746_05660 PF12833 Helix-turn-helix domain JT746_05660 PF12852 Cupin JT746_05665 PF08502 LeuA allosteric (dimerisation) domain JT746_05665 PF00682 HMGL-like JT746_05670 PF07690 Major Facilitator Superfamily JT746_05675 PF00529 HlyD membrane-fusion protein of T1SS JT746_05675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_05680 PF01047 MarR family JT746_05685 PF05437 Branched-chain amino acid transport protein (AzlD) JT746_05690 PF03591 AzlC protein JT746_05695 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT746_05700 PF00528 Binding-protein-dependent transport system inner membrane component JT746_05705 PF00571 CBS domain JT746_05705 PF00005 ABC transporter JT746_05710 PF00268 Ribonucleotide reductase, small chain JT746_05715 PF08343 Ribonucleotide reductase N-terminal JT746_05715 PF02867 Ribonucleotide reductase, barrel domain JT746_05715 PF00317 Ribonucleotide reductase, all-alpha domain JT746_05720 PF07972 NrdI Flavodoxin like JT746_05725 PF00462 Glutaredoxin JT746_05730 PF02627 Carboxymuconolactone decarboxylase family JT746_05735 PF00155 Aminotransferase class I and II JT746_05735 PF00392 Bacterial regulatory proteins, gntR family JT746_05740 PF05957 Bacterial protein of unknown function (DUF883) JT746_05745 PF09400 Protein of unknown function (DUF2002) JT746_05750 PF06610 L-alanine exporter JT746_05755 PF00816 H-NS histone family JT746_05770 PF00581 Rhodanese-like domain JT746_05770 PF11127 Protein of unknown function (DUF2892) JT746_05775 PF01022 Bacterial regulatory protein, arsR family JT746_05780 PF02525 Flavodoxin-like fold JT746_05785 PF03466 LysR substrate binding domain JT746_05785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_05790 PF02954 Bacterial regulatory protein, Fis family JT746_05790 PF00158 Sigma-54 interaction domain JT746_05790 PF01590 GAF domain JT746_05795 PF00171 Aldehyde dehydrogenase family JT746_05800 PF00419 Fimbrial protein JT746_05805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_05805 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_05810 PF00577 Outer membrane usher protein JT746_05810 PF13953 PapC C-terminal domain JT746_05810 PF13954 PapC N-terminal domain JT746_05820 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_05820 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_05840 PF00106 short chain dehydrogenase JT746_05845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_05850 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_05855 PF00005 ABC transporter JT746_05860 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_05875 PF00491 Arginase family JT746_05880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_05880 PF03466 LysR substrate binding domain JT746_05890 PF01494 FAD binding domain JT746_05895 PF03466 LysR substrate binding domain JT746_05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_05920 PF04199 Putative cyclase JT746_05935 PF01915 Glycosyl hydrolase family 3 C-terminal domain JT746_05935 PF00933 Glycosyl hydrolase family 3 N terminal domain JT746_05935 PF07691 PA14 domain JT746_05935 PF14310 Fibronectin type III-like domain JT746_05940 PF03358 NADPH-dependent FMN reductase JT746_05945 PF00296 Luciferase-like monooxygenase JT746_05955 PF07690 Major Facilitator Superfamily JT746_05965 PF07690 Major Facilitator Superfamily JT746_05970 PF01261 Xylose isomerase-like TIM barrel JT746_05990 PF00873 AcrB/AcrD/AcrF family JT746_05995 PF00529 HlyD membrane-fusion protein of T1SS JT746_05995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_06000 PF06445 GyrI-like small molecule binding domain JT746_06000 PF12833 Helix-turn-helix domain JT746_06010 PF03466 LysR substrate binding domain JT746_06010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_06020 PF07883 Cupin domain JT746_06035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT746_06035 PF13378 Enolase C-terminal domain-like JT746_06040 PF00106 short chain dehydrogenase JT746_06045 PF07690 Major Facilitator Superfamily JT746_06050 PF08240 Alcohol dehydrogenase GroES-like domain JT746_06050 PF00107 Zinc-binding dehydrogenase JT746_06055 PF07729 FCD domain JT746_06055 PF00392 Bacterial regulatory proteins, gntR family JT746_06075 PF17345 Family of unknown function (DUF5375) JT746_06100 PF04606 Ogr/Delta-like zinc finger JT746_06115 PF00589 Phage integrase family JT746_06115 PF13356 Arm DNA-binding domain JT746_06125 PF01668 SmpB protein JT746_06130 PF03364 Polyketide cyclase / dehydrase and lipid transport JT746_06135 PF03658 RnfH family Ubiquitin JT746_06140 PF04355 SmpA / OmlA family JT746_06145 PF02463 RecF/RecN/SMC N terminal domain JT746_06150 PF01513 ATP-NAD kinase JT746_06155 PF01025 GrpE JT746_06160 PF01595 Cyclin M transmembrane N-terminal domain JT746_06160 PF03471 Transporter associated domain JT746_06160 PF00571 CBS domain JT746_06165 PF01578 Cytochrome C assembly protein JT746_06170 PF00448 SRP54-type protein, GTPase domain JT746_06170 PF02881 SRP54-type protein, helical bundle domain JT746_06170 PF02978 Signal peptide binding domain JT746_06175 PF00886 Ribosomal protein S16 JT746_06180 PF05239 PRC-barrel domain JT746_06180 PF01782 RimM N-terminal domain JT746_06185 PF01746 tRNA (Guanine-1)-methyltransferase JT746_06190 PF01245 Ribosomal protein L19 JT746_06205 PF00691 OmpA family JT746_06210 PF00990 Diguanylate cyclase, GGDEF domain JT746_06210 PF17152 Periplasmic sensor domain JT746_06215 PF13689 YfiR/HmsC-like JT746_06220 PF00793 DAHP synthetase I family JT746_06225 PF01817 Chorismate mutase type II JT746_06225 PF02153 Prephenate dehydrogenase JT746_06230 PF08450 SMP-30/Gluconolactonase/LRE-like region JT746_06235 PF00800 Prephenate dehydratase JT746_06235 PF01817 Chorismate mutase type II JT746_06245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JT746_06250 PF13525 Outer membrane lipoprotein JT746_06255 PF01479 S4 domain JT746_06255 PF00849 RNA pseudouridylate synthase JT746_06260 PF02578 Multi-copper polyphenol oxidoreductase laccase JT746_06265 PF02861 Clp amino terminal domain, pathogenicity island component JT746_06265 PF07724 AAA domain (Cdc48 subfamily) JT746_06265 PF10431 C-terminal, D2-small domain, of ClpB protein JT746_06265 PF00004 ATPase family associated with various cellular activities (AAA) JT746_06265 PF17871 AAA lid domain JT746_06295 PF00083 Sugar (and other) transporter JT746_06300 PF10043 Predicted periplasmic lipoprotein (DUF2279) JT746_06305 PF13091 PLD-like domain JT746_06310 PF13607 Succinyl-CoA ligase like flavodoxin domain JT746_06310 PF13380 CoA binding domain JT746_06310 PF00583 Acetyltransferase (GNAT) family JT746_06315 PF03942 DTW domain JT746_06320 PF00085 Thioredoxin JT746_06325 PF00588 SpoU rRNA Methylase family JT746_06325 PF08032 RNA 2'-O ribose methyltransferase substrate binding JT746_06330 PF03167 Uracil DNA glycosylase superfamily JT746_06335 PF01228 Glycine radical JT746_06340 PF00271 Helicase conserved C-terminal domain JT746_06340 PF00270 DEAD/DEAH box helicase JT746_06345 PF05175 Methyltransferase small domain JT746_06350 PF00890 FAD binding domain JT746_06350 PF02910 Fumarate reductase flavoprotein C-term JT746_06360 PF04542 Sigma-70 region 2 JT746_06360 PF08281 Sigma-70, region 4 JT746_06365 PF03873 Anti sigma-E protein RseA, C-terminal domain JT746_06365 PF03872 Anti sigma-E protein RseA, N-terminal domain JT746_06370 PF03888 MucB/RseB N-terminal domain JT746_06370 PF17188 MucB/RseB C-terminal domain JT746_06380 PF06421 GTP-binding protein LepA C-terminus JT746_06380 PF03144 Elongation factor Tu domain 2 JT746_06380 PF00679 Elongation factor G C-terminus JT746_06380 PF00009 Elongation factor Tu GTP binding domain JT746_06385 PF10502 Signal peptidase, peptidase S26 JT746_06390 PF00035 Double-stranded RNA binding motif JT746_06390 PF14622 Ribonuclease-III-like JT746_06395 PF07650 KH domain JT746_06395 PF01926 50S ribosome-binding GTPase JT746_06400 PF11967 Recombination protein O N terminal JT746_06400 PF02565 Recombination protein O C terminal JT746_06405 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JT746_06410 PF01648 4'-phosphopantetheinyl transferase superfamily JT746_06415 PF12838 4Fe-4S dicluster domain JT746_06420 PF01380 SIS domain JT746_06420 PF01418 Helix-turn-helix domain, rpiR family JT746_06430 PF14437 MafB19-like deaminase JT746_06435 PF01464 Transglycosylase SLT domain JT746_06435 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_06440 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JT746_06440 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JT746_06440 PF02769 AIR synthase related protein, C-terminal domain JT746_06445 PF00512 His Kinase A (phospho-acceptor) domain JT746_06445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_06450 PF13942 YfhG lipoprotein JT746_06455 PF00072 Response regulator receiver domain JT746_06455 PF00158 Sigma-54 interaction domain JT746_06460 PF00543 Nitrogen regulatory protein P-II JT746_06465 PF00175 Oxidoreductase NAD-binding domain JT746_06465 PF00970 Oxidoreductase FAD-binding domain JT746_06465 PF00042 Globin JT746_06470 PF00464 Serine hydroxymethyltransferase JT746_06475 PF07681 DoxX JT746_06480 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_06480 PF14759 Reductase C-terminal JT746_06485 PF00106 short chain dehydrogenase JT746_06490 PF00355 Rieske [2Fe-2S] domain JT746_06495 PF00866 Ring hydroxylating beta subunit JT746_06500 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JT746_06500 PF00355 Rieske [2Fe-2S] domain JT746_06505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_06505 PF03466 LysR substrate binding domain JT746_06510 PF12832 MFS_1 like family JT746_06515 PF00874 PRD domain JT746_06520 PF06226 Protein of unknown function (DUF1007) JT746_06525 PF03824 High-affinity nickel-transport protein JT746_06530 PF00459 Inositol monophosphatase family JT746_06535 PF00588 SpoU rRNA Methylase family JT746_06540 PF02082 Transcriptional regulator JT746_06545 PF00266 Aminotransferase class-V JT746_06550 PF01592 NifU-like N terminal domain JT746_06555 PF01521 Iron-sulphur cluster biosynthesis JT746_06560 PF07743 HSCB C-terminal oligomerisation domain JT746_06560 PF00226 DnaJ domain JT746_06565 PF00012 Hsp70 protein JT746_06570 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_06575 PF04384 Iron-sulphur cluster assembly JT746_06580 PF00883 Cytosol aminopeptidase family, catalytic domain JT746_06580 PF12404 Peptidase JT746_06585 PF07179 SseB protein N-terminal domain JT746_06585 PF14581 SseB protein C-terminal domain JT746_06600 PF00581 Rhodanese-like domain JT746_06605 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain JT746_06605 PF17962 Bacterial macroglobulin domain 6 JT746_06605 PF07703 Alpha-2-macroglobulin bait region domain JT746_06605 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain JT746_06605 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain JT746_06605 PF11974 Bacterial alpha-2-macroglobulin MG3 domain JT746_06605 PF00207 Alpha-2-macroglobulin family JT746_06605 PF07678 A-macroglobulin TED domain JT746_06605 PF01835 MG2 domain JT746_06610 PF00905 Penicillin binding protein transpeptidase domain JT746_06610 PF00912 Transglycosylase JT746_06610 PF06832 Penicillin-Binding Protein C-terminus Family JT746_06615 PF00334 Nucleoside diphosphate kinase JT746_06620 PF04055 Radical SAM superfamily JT746_06625 PF13464 Domain of unknown function (DUF4115) JT746_06630 PF04551 GcpE protein JT746_06635 PF03129 Anticodon binding domain JT746_06635 PF13393 Histidyl-tRNA synthetase JT746_06640 PF09976 Tetratricopeptide repeat-like domain JT746_06645 PF13360 PQQ-like domain JT746_06650 PF01926 50S ribosome-binding GTPase JT746_06650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JT746_06660 PF07191 zinc-ribbons JT746_06665 PF02601 Exonuclease VII, large subunit JT746_06665 PF13742 OB-fold nucleic acid binding domain JT746_06670 PF00571 CBS domain JT746_06670 PF00478 IMP dehydrogenase / GMP reductase domain JT746_06675 PF00117 Glutamine amidotransferase class-I JT746_06675 PF00958 GMP synthase C terminal domain JT746_06675 PF02540 NAD synthase JT746_06695 PF00106 short chain dehydrogenase JT746_06705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_06705 PF03466 LysR substrate binding domain JT746_06710 PF11119 Protein of unknown function (DUF2633) JT746_06715 PF00563 EAL domain JT746_06715 PF05231 MASE1 JT746_06720 PF02541 Ppx/GppA phosphatase family JT746_06725 PF13089 Polyphosphate kinase N-terminal domain JT746_06725 PF17941 Polyphosphate kinase C-terminal domain 1 JT746_06725 PF13090 Polyphosphate kinase C-terminal domain 2 JT746_06725 PF02503 Polyphosphate kinase middle domain JT746_06730 PF00551 Formyl transferase JT746_06735 PF02769 AIR synthase related protein, C-terminal domain JT746_06735 PF00586 AIR synthase related protein, N-terminal domain JT746_06740 PF00480 ROK family JT746_06745 PF00232 Glycosyl hydrolase family 1 JT746_06755 PF00860 Permease family JT746_06765 PF04754 Putative transposase, YhgA-like JT746_06770 PF03960 ArsC family JT746_06775 PF01435 Peptidase family M48 JT746_06785 PF01594 AI-2E family transporter JT746_06790 PF00578 AhpC/TSA family JT746_06795 PF01842 ACT domain JT746_06800 PF00701 Dihydrodipicolinate synthetase family JT746_06805 PF06804 NlpB/DapX lipoprotein JT746_06810 PF01259 SAICAR synthetase JT746_06815 PF04228 Putative neutral zinc metallopeptidase JT746_06820 PF13718 GNAT acetyltransferase 2 JT746_06820 PF05127 Helicase JT746_06820 PF17176 tRNA-binding domain JT746_06820 PF08351 Domain of unknown function (DUF1726) JT746_06825 PF02230 Phospholipase/Carboxylesterase JT746_06830 PF13980 Uncharacterised protein family (UPF0370) JT746_06835 PF07687 Peptidase dimerisation domain JT746_06835 PF01546 Peptidase family M20/M25/M40 JT746_06840 PF03960 ArsC family JT746_06850 PF00873 AcrB/AcrD/AcrF family JT746_06855 PF13247 4Fe-4S dicluster domain JT746_06855 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JT746_06855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_06860 PF00293 NUDIX domain JT746_06865 PF06674 Protein of unknown function (DUF1176) JT746_06870 PF00456 Transketolase, thiamine diphosphate binding domain JT746_06870 PF02780 Transketolase, C-terminal domain JT746_06870 PF02779 Transketolase, pyrimidine binding domain JT746_06875 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT746_06880 PF03949 Malic enzyme, NAD binding domain JT746_06880 PF01515 Phosphate acetyl/butaryl transferase JT746_06880 PF00390 Malic enzyme, N-terminal domain JT746_06885 PF01218 Coproporphyrinogen III oxidase JT746_06890 PF01520 N-acetylmuramoyl-L-alanine amidase JT746_06895 PF00583 Acetyltransferase (GNAT) family JT746_06900 PF11143 Protein of unknown function (DUF2919) JT746_06905 PF06572 Protein of unknown function (DUF1131) JT746_06910 PF04261 Dyp-type peroxidase family JT746_06925 PF00528 Binding-protein-dependent transport system inner membrane component JT746_06930 PF00528 Binding-protein-dependent transport system inner membrane component JT746_06935 PF00005 ABC transporter JT746_06940 PF00291 Pyridoxal-phosphate dependent enzyme JT746_06945 PF13474 SnoaL-like domain JT746_06950 PF00392 Bacterial regulatory proteins, gntR family JT746_06950 PF00155 Aminotransferase class I and II JT746_06955 PF08543 Phosphomethylpyrimidine kinase JT746_06965 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT746_06970 PF02896 PEP-utilising enzyme, TIM barrel domain JT746_06970 PF05524 PEP-utilising enzyme, N-terminal JT746_06970 PF00391 PEP-utilising enzyme, mobile domain JT746_06975 PF00381 PTS HPr component phosphorylation site JT746_06980 PF00291 Pyridoxal-phosphate dependent enzyme JT746_06990 PF04354 ZipA, C-terminal FtsZ-binding domain JT746_06995 PF03120 NAD-dependent DNA ligase OB-fold domain JT746_06995 PF01653 NAD-dependent DNA ligase adenylation domain JT746_06995 PF00533 BRCA1 C Terminus (BRCT) domain JT746_06995 PF12826 Helix-hairpin-helix motif JT746_06995 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JT746_07000 PF12843 Putative quorum-sensing-regulated virulence factor JT746_07005 PF13593 SBF-like CPA transporter family (DUF4137) JT746_07010 PF03466 LysR substrate binding domain JT746_07010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_07045 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT746_07055 PF07037 Putative transcription regulator (DUF1323) JT746_07070 PF05231 MASE1 JT746_07070 PF00563 EAL domain JT746_07075 PF07662 Na+ dependent nucleoside transporter C-terminus JT746_07075 PF07670 Nucleoside recognition JT746_07075 PF01773 Na+ dependent nucleoside transporter N-terminus JT746_07080 PF01566 Natural resistance-associated macrophage protein JT746_07085 PF10697 Protein of unknown function (DUF2502) JT746_07090 PF00248 Aldo/keto reductase family JT746_07095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_07095 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_07095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_07100 PF00654 Voltage gated chloride channel JT746_07105 PF02685 Glucokinase JT746_07110 PF04397 LytTr DNA-binding domain JT746_07110 PF00072 Response regulator receiver domain JT746_07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_07115 PF07694 5TMR of 5TMR-LYT JT746_07115 PF06580 Histidine kinase JT746_07125 PF00155 Aminotransferase class I and II JT746_07135 PF07690 Major Facilitator Superfamily JT746_07140 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT746_07145 PF03466 LysR substrate binding domain JT746_07145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_07160 PF00990 Diguanylate cyclase, GGDEF domain JT746_07160 PF17158 Membrane-associated sensor, integral membrane domain JT746_07175 PF00589 Phage integrase family JT746_07175 PF14659 Phage integrase, N-terminal SAM-like domain JT746_07175 PF13356 Arm DNA-binding domain JT746_07225 PF01381 Helix-turn-helix JT746_07250 PF02086 D12 class N6 adenine-specific DNA methyltransferase JT746_07255 PF05866 Endodeoxyribonuclease RusA JT746_07260 PF06147 Protein of unknown function (DUF968) JT746_07300 PF00182 Chitinase class I JT746_07450 PF00239 Resolvase, N terminal domain JT746_07450 PF02796 Helix-turn-helix domain of resolvase JT746_07470 PF01226 Formate/nitrite transporter JT746_07475 PF04333 MlaA lipoprotein JT746_07480 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JT746_07485 PF04175 Protein of unknown function (DUF406) JT746_07490 PF00108 Thiolase, N-terminal domain JT746_07490 PF02803 Thiolase, C-terminal domain JT746_07495 PF00378 Enoyl-CoA hydratase/isomerase JT746_07495 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT746_07495 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT746_07500 PF00300 Histidine phosphatase superfamily (branch 1) JT746_07505 PF01713 Smr domain JT746_07510 PF05175 Methyltransferase small domain JT746_07515 PF01264 Chorismate synthase JT746_07520 PF03411 Penicillin-insensitive murein endopeptidase JT746_07525 PF01925 Sulfite exporter TauE/SafE JT746_07530 PF04315 Elongation factor P hydroxylase JT746_07535 PF08891 YfcL protein JT746_07540 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JT746_07540 PF01266 FAD dependent oxidoreductase JT746_07545 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_07545 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_07550 PF07690 Major Facilitator Superfamily JT746_07560 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_07560 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_07560 PF11890 Domain of unknown function (DUF3410) JT746_07565 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT746_07565 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT746_07570 PF01416 tRNA pseudouridine synthase JT746_07575 PF09335 SNARE associated Golgi protein JT746_07580 PF17848 Acetyl-coA carboxylase zinc finger domain JT746_07580 PF01039 Carboxyl transferase domain JT746_07585 PF08245 Mur ligase middle domain JT746_07585 PF02875 Mur ligase family, glutamate ligase domain JT746_07590 PF05036 Sporulation related domain JT746_07595 PF02674 Colicin V production protein JT746_07600 PF00156 Phosphoribosyl transferase domain JT746_07605 PF02441 Flavoprotein JT746_07615 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_07620 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_07625 PF00528 Binding-protein-dependent transport system inner membrane component JT746_07630 PF00528 Binding-protein-dependent transport system inner membrane component JT746_07635 PF00005 ABC transporter JT746_07640 PF13302 Acetyltransferase (GNAT) domain JT746_07650 PF08338 Domain of unknown function (DUF1731) JT746_07650 PF01370 NAD dependent epimerase/dehydratase family JT746_07655 PF02152 Dihydroneopterin aldolase JT746_07660 PF02798 Glutathione S-transferase, N-terminal domain JT746_07660 PF00043 Glutathione S-transferase, C-terminal domain JT746_07665 PF14834 Glutathione S-transferase, C-terminal domain JT746_07665 PF02798 Glutathione S-transferase, N-terminal domain JT746_07670 PF12850 Calcineurin-like phosphoesterase superfamily domain JT746_07675 PF00293 NUDIX domain JT746_07680 PF01515 Phosphate acetyl/butaryl transferase JT746_07680 PF07085 DRTGG domain JT746_07685 PF00871 Acetokinase family JT746_07690 PF04217 Protein of unknown function, DUF412 JT746_07695 PF03887 YfbU domain JT746_07700 PF13419 Haloacid dehalogenase-like hydrolase JT746_07705 PF02080 TrkA-C domain JT746_07705 PF03600 Citrate transporter JT746_07715 PF00155 Aminotransferase class I and II JT746_07720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_07720 PF03466 LysR substrate binding domain JT746_07725 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JT746_07730 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JT746_07735 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JT746_07735 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JT746_07745 PF10531 SLBB domain JT746_07745 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JT746_07745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT746_07750 PF01568 Molydopterin dinucleotide binding domain JT746_07750 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JT746_07750 PF00384 Molybdopterin oxidoreductase JT746_07750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT746_07755 PF00146 NADH dehydrogenase JT746_07760 PF12838 4Fe-4S dicluster domain JT746_07765 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JT746_07770 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JT746_07775 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JT746_07775 PF00361 Proton-conducting membrane transporter JT746_07780 PF00361 Proton-conducting membrane transporter JT746_07785 PF00361 Proton-conducting membrane transporter JT746_07790 PF12706 Beta-lactamase superfamily domain JT746_07795 PF13673 Acetyltransferase (GNAT) domain JT746_07800 PF00425 chorismate binding enzyme JT746_07805 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_07805 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_07805 PF16582 Middle domain of thiamine pyrophosphate JT746_07810 PF12697 Alpha/beta hydrolase family JT746_07815 PF00378 Enoyl-CoA hydratase/isomerase JT746_07820 PF13378 Enolase C-terminal domain-like JT746_07825 PF00501 AMP-binding enzyme JT746_07825 PF13193 AMP-binding enzyme C-terminal domain JT746_07830 PF01970 Tripartite tricarboxylate transporter TctA family JT746_07845 PF00072 Response regulator receiver domain JT746_07845 PF00486 Transcriptional regulatory protein, C terminal JT746_07850 PF08521 Two-component sensor kinase N-terminal JT746_07850 PF00512 His Kinase A (phospho-acceptor) domain JT746_07850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_07855 PF00293 NUDIX domain JT746_07860 PF04754 Putative transposase, YhgA-like JT746_07865 PF07437 YfaZ precursor JT746_07870 PF00994 Probable molybdopterin binding domain JT746_07875 PF09339 IclR helix-turn-helix domain JT746_07875 PF01614 Bacterial transcriptional regulator JT746_07880 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT746_07880 PF13378 Enolase C-terminal domain-like JT746_07885 PF07690 Major Facilitator Superfamily JT746_07890 PF03328 HpcH/HpaI aldolase/citrate lyase family JT746_07895 PF02754 Cysteine-rich domain JT746_07895 PF13183 4Fe-4S dicluster domain JT746_07900 PF00890 FAD binding domain JT746_07905 PF04324 BFD-like [2Fe-2S] binding domain JT746_07905 PF01266 FAD dependent oxidoreductase JT746_07910 PF07690 Major Facilitator Superfamily JT746_07915 PF03009 Glycerophosphoryl diester phosphodiesterase family JT746_07920 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_07925 PF00268 Ribonucleotide reductase, small chain JT746_07930 PF02867 Ribonucleotide reductase, barrel domain JT746_07930 PF00317 Ribonucleotide reductase, all-alpha domain JT746_07930 PF03477 ATP cone domain JT746_07940 PF00521 DNA gyrase/topoisomerase IV, subunit A JT746_07940 PF03989 DNA gyrase C-terminal domain, beta-propeller JT746_07945 PF00512 His Kinase A (phospho-acceptor) domain JT746_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_07945 PF09456 RcsC Alpha-Beta-Loop (ABL) JT746_07945 PF00072 Response regulator receiver domain JT746_07950 PF00196 Bacterial regulatory proteins, luxR family JT746_07950 PF00072 Response regulator receiver domain JT746_07955 PF01627 Hpt domain JT746_07955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_07955 PF16359 RcsD-ABL domain JT746_07960 PF00267 Gram-negative porin JT746_07965 PF02424 ApbE family JT746_07970 PF02805 Metal binding domain of Ada JT746_07970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JT746_07970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT746_07970 PF12833 Helix-turn-helix domain JT746_07975 PF13532 2OG-Fe(II) oxygenase superfamily JT746_07980 PF00005 ABC transporter JT746_07985 PF00571 CBS domain JT746_07985 PF01769 Divalent cation transporter JT746_07985 PF03448 MgtE intracellular N domain JT746_07990 PF00916 Sulfate permease family JT746_07990 PF01740 STAS domain JT746_07995 PF06039 Malate:quinone oxidoreductase (Mqo) JT746_08000 PF03974 Ecotin JT746_08005 PF01594 AI-2E family transporter JT746_08015 PF00884 Sulfatase JT746_08015 PF11893 Domain of unknown function (DUF3413) JT746_08020 PF07208 Protein of unknown function (DUF1414) JT746_08025 PF04245 37-kD nucleoid-associated bacterial protein JT746_08030 PF00455 DeoR C terminal sensor domain JT746_08030 PF08220 DeoR-like helix-turn-helix domain JT746_08035 PF00293 NUDIX domain JT746_08040 PF00144 Beta-lactamase JT746_08050 PF01386 Ribosomal L25p family JT746_08055 PF04851 Type III restriction enzyme, res subunit JT746_08055 PF00271 Helicase conserved C-terminal domain JT746_08060 PF00849 RNA pseudouridylate synthase JT746_08060 PF01479 S4 domain JT746_08065 PF07690 Major Facilitator Superfamily JT746_08070 PF13989 YejG-like protein JT746_08075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_08075 PF00005 ABC transporter JT746_08080 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_08080 PF00528 Binding-protein-dependent transport system inner membrane component JT746_08085 PF00528 Binding-protein-dependent transport system inner membrane component JT746_08090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_08095 PF00563 EAL domain JT746_08095 PF12792 CSS motif domain associated with EAL JT746_08100 PF00877 NlpC/P60 family JT746_08105 PF01569 PAP2 superfamily JT746_08110 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT746_08110 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT746_08115 PF08125 Mannitol dehydrogenase C-terminal domain JT746_08115 PF01232 Mannitol dehydrogenase Rossmann domain JT746_08120 PF03786 D-mannonate dehydratase (UxuA) JT746_08125 PF01132 Elongation factor P (EF-P) OB domain JT746_08125 PF08207 Elongation factor P (EF-P) KOW-like domain JT746_08125 PF09285 Elongation factor P, C-terminal JT746_08130 PF03692 Putative zinc- or iron-chelating domain JT746_08135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08135 PF03466 LysR substrate binding domain JT746_08140 PF11742 Protein of unknown function (DUF3302) JT746_08145 PF00529 HlyD membrane-fusion protein of T1SS JT746_08145 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_08150 PF07690 Major Facilitator Superfamily JT746_08155 PF00381 PTS HPr component phosphorylation site JT746_08155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_08160 PF00294 pfkB family carbohydrate kinase JT746_08165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_08165 PF02378 Phosphotransferase system, EIIC JT746_08170 PF01261 Xylose isomerase-like TIM barrel JT746_08175 PF03601 Conserved hypothetical protein 698 JT746_08180 PF03466 LysR substrate binding domain JT746_08180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08185 PF00324 Amino acid permease JT746_08190 PF07715 TonB-dependent Receptor Plug Domain JT746_08190 PF00593 TonB dependent receptor JT746_08195 PF00756 Putative esterase JT746_08200 PF01227 GTP cyclohydrolase I JT746_08205 PF04235 Protein of unknown function (DUF418) JT746_08210 PF00356 Bacterial regulatory proteins, lacI family JT746_08215 PF13407 Periplasmic binding protein domain JT746_08220 PF00005 ABC transporter JT746_08225 PF02653 Branched-chain amino acid transport system / permease component JT746_08230 PF02698 DUF218 domain JT746_08235 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JT746_08235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT746_08240 PF04172 LrgB-like family JT746_08245 PF03788 LrgA family JT746_08250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08250 PF03466 LysR substrate binding domain JT746_08260 PF07883 Cupin domain JT746_08265 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_08270 PF02798 Glutathione S-transferase, N-terminal domain JT746_08270 PF14497 Glutathione S-transferase, C-terminal domain JT746_08275 PF01494 FAD binding domain JT746_08280 PF01207 Dihydrouridine synthase (Dus) JT746_08285 PF04966 Carbohydrate-selective porin, OprB family JT746_08290 PF00874 PRD domain JT746_08290 PF03123 CAT RNA binding domain JT746_08295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT746_08295 PF02378 Phosphotransferase system, EIIC JT746_08295 PF00367 phosphotransferase system, EIIB JT746_08300 PF00232 Glycosyl hydrolase family 1 JT746_08305 PF08241 Methyltransferase domain JT746_08310 PF02321 Outer membrane efflux protein JT746_08315 PF09335 SNARE associated Golgi protein JT746_08320 PF04893 Yip1 domain JT746_08325 PF00768 D-alanyl-D-alanine carboxypeptidase JT746_08335 PF01565 FAD binding domain JT746_08335 PF09330 D-lactate dehydrogenase, membrane binding JT746_08340 PF01915 Glycosyl hydrolase family 3 C-terminal domain JT746_08340 PF14310 Fibronectin type III-like domain JT746_08340 PF00933 Glycosyl hydrolase family 3 N terminal domain JT746_08345 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT746_08350 PF00528 Binding-protein-dependent transport system inner membrane component JT746_08355 PF00005 ABC transporter JT746_08360 PF00528 Binding-protein-dependent transport system inner membrane component JT746_08370 PF06580 Histidine kinase JT746_08370 PF07694 5TMR of 5TMR-LYT JT746_08375 PF04397 LytTr DNA-binding domain JT746_08375 PF00072 Response regulator receiver domain JT746_08380 PF07308 Protein of unknown function (DUF1456) JT746_08385 PF01588 Putative tRNA binding domain JT746_08385 PF09334 tRNA synthetases class I (M) JT746_08390 PF10609 NUBPL iron-transfer P-loop NTPase JT746_08400 PF11776 Nickel/cobalt transporter regulator JT746_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08405 PF03466 LysR substrate binding domain JT746_08410 PF00860 Permease family JT746_08415 PF13382 Adenine deaminase C-terminal domain JT746_08415 PF01979 Amidohydrolase family JT746_08420 PF03466 LysR substrate binding domain JT746_08420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08430 PF00753 Metallo-beta-lactamase superfamily JT746_08430 PF14864 Alkyl sulfatase C-terminal JT746_08430 PF14863 Alkyl sulfatase dimerisation JT746_08440 PF00753 Metallo-beta-lactamase superfamily JT746_08440 PF14863 Alkyl sulfatase dimerisation JT746_08440 PF14864 Alkyl sulfatase C-terminal JT746_08445 PF02110 Hydroxyethylthiazole kinase family JT746_08450 PF08543 Phosphomethylpyrimidine kinase JT746_08455 PF01791 DeoC/LacD family aldolase JT746_08460 PF07690 Major Facilitator Superfamily JT746_08470 PF00106 short chain dehydrogenase JT746_08475 PF00356 Bacterial regulatory proteins, lacI family JT746_08480 PF04198 Putative sugar-binding domain JT746_08485 PF08125 Mannitol dehydrogenase C-terminal domain JT746_08485 PF01232 Mannitol dehydrogenase Rossmann domain JT746_08490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_08490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_08495 PF07690 Major Facilitator Superfamily JT746_08500 PF13419 Haloacid dehalogenase-like hydrolase JT746_08505 PF00781 Diacylglycerol kinase catalytic domain JT746_08510 PF16325 Peptidase family U32 C-terminal domain JT746_08510 PF01136 Peptidase family U32 JT746_08515 PF00072 Response regulator receiver domain JT746_08515 PF00486 Transcriptional regulatory protein, C terminal JT746_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_08520 PF00512 His Kinase A (phospho-acceptor) domain JT746_08520 PF00672 HAMP domain JT746_08525 PF07690 Major Facilitator Superfamily JT746_08530 PF00873 AcrB/AcrD/AcrF family JT746_08535 PF00873 AcrB/AcrD/AcrF family JT746_08540 PF13533 Biotin-lipoyl like JT746_08545 PF00375 Sodium:dicarboxylate symporter family JT746_08560 PF00486 Transcriptional regulatory protein, C terminal JT746_08560 PF00072 Response regulator receiver domain JT746_08565 PF07689 KaiB domain JT746_08565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_08565 PF00512 His Kinase A (phospho-acceptor) domain JT746_08570 PF00012 Hsp70 protein JT746_08575 PF00730 HhH-GPD superfamily base excision DNA repair protein JT746_08575 PF06029 AlkA N-terminal domain JT746_08580 PF00485 Phosphoribulokinase / Uridine kinase family JT746_08585 PF00692 dUTPase JT746_08590 PF05170 AsmA family JT746_08595 PF03471 Transporter associated domain JT746_08595 PF00571 CBS domain JT746_08595 PF03741 Integral membrane protein TerC family JT746_08600 PF00483 Nucleotidyl transferase JT746_08605 PF01569 PAP2 superfamily JT746_08615 PF14052 Capsule assembly protein Wzi JT746_08620 PF02563 Polysaccharide biosynthesis/export protein JT746_08620 PF10531 SLBB domain JT746_08620 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JT746_08625 PF01451 Low molecular weight phosphotyrosine protein phosphatase JT746_08630 PF13807 G-rich domain on putative tyrosine kinase JT746_08630 PF13614 AAA domain JT746_08630 PF02706 Chain length determinant protein JT746_08635 PF02397 Bacterial sugar transferase JT746_08640 PF00534 Glycosyl transferases group 1 JT746_08640 PF13439 Glycosyltransferase Family 4 JT746_08660 PF00534 Glycosyl transferases group 1 JT746_08660 PF13439 Glycosyltransferase Family 4 JT746_08685 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT746_08685 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JT746_08690 PF00483 Nucleotidyl transferase JT746_08690 PF01050 Mannose-6-phosphate isomerase JT746_08695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT746_08695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT746_08695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT746_08695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT746_08700 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JT746_08700 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JT746_08700 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JT746_08710 PF01370 NAD dependent epimerase/dehydratase family JT746_08715 PF00483 Nucleotidyl transferase JT746_08715 PF01050 Mannose-6-phosphate isomerase JT746_08720 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT746_08720 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT746_08720 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT746_08720 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT746_08730 PF00005 ABC transporter JT746_08735 PF13847 Methyltransferase domain JT746_08735 PF00069 Protein kinase domain JT746_08740 PF00534 Glycosyl transferases group 1 JT746_08740 PF13439 Glycosyltransferase Family 4 JT746_08745 PF00862 Sucrose synthase JT746_08745 PF00534 Glycosyl transferases group 1 JT746_08755 PF01502 Phosphoribosyl-AMP cyclohydrolase JT746_08755 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JT746_08760 PF00977 Histidine biosynthesis protein JT746_08765 PF00977 Histidine biosynthesis protein JT746_08770 PF00117 Glutamine amidotransferase class-I JT746_08775 PF08645 Polynucleotide kinase 3 phosphatase JT746_08775 PF00475 Imidazoleglycerol-phosphate dehydratase JT746_08780 PF00155 Aminotransferase class I and II JT746_08785 PF00815 Histidinol dehydrogenase JT746_08790 PF01634 ATP phosphoribosyltransferase JT746_08790 PF08029 HisG, C-terminal domain JT746_08800 PF01370 NAD dependent epimerase/dehydratase family JT746_08805 PF03466 LysR substrate binding domain JT746_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08815 PF13520 Amino acid permease JT746_08820 PF04891 NifQ JT746_08825 PF04055 Radical SAM superfamily JT746_08825 PF02579 Dinitrogenase iron-molybdenum cofactor JT746_08830 PF00158 Sigma-54 interaction domain JT746_08830 PF02954 Bacterial regulatory protein, Fis family JT746_08830 PF13185 GAF domain JT746_08835 PF00989 PAS fold JT746_08840 PF00258 Flavodoxin JT746_08845 PF00639 PPIC-type PPIASE domain JT746_08850 PF04319 NifZ domain JT746_08855 PF03206 Nitrogen fixation protein NifW JT746_08860 PF00682 HMGL-like JT746_08865 PF00266 Aminotransferase class-V JT746_08870 PF01106 NifU-like domain JT746_08870 PF04324 BFD-like [2Fe-2S] binding domain JT746_08870 PF01592 NifU-like N terminal domain JT746_08875 PF02579 Dinitrogenase iron-molybdenum cofactor JT746_08880 PF00148 Nitrogenase component 1 type Oxidoreductase JT746_08885 PF00148 Nitrogenase component 1 type Oxidoreductase JT746_08890 PF02579 Dinitrogenase iron-molybdenum cofactor JT746_08895 PF06988 NifT/FixU protein JT746_08900 PF00148 Nitrogenase component 1 type Oxidoreductase JT746_08900 PF11844 Domain of unknown function (DUF3364) JT746_08905 PF00148 Nitrogenase component 1 type Oxidoreductase JT746_08910 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family JT746_08915 PF10371 Domain of unknown function JT746_08915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_08915 PF12838 4Fe-4S dicluster domain JT746_08915 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JT746_08915 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JT746_08915 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JT746_08920 PF01022 Bacterial regulatory protein, arsR family JT746_08925 PF00679 Elongation factor G C-terminus JT746_08925 PF00009 Elongation factor Tu GTP binding domain JT746_08925 PF03764 Elongation factor G, domain IV JT746_08925 PF03144 Elongation factor Tu domain 2 JT746_08925 PF14492 Elongation Factor G, domain II JT746_08930 PF08411 Exonuclease C-terminal JT746_08930 PF00929 Exonuclease JT746_08935 PF07943 Penicillin-binding protein 5, C-terminal domain JT746_08935 PF00768 D-alanyl-D-alanine carboxypeptidase JT746_08940 PF06445 GyrI-like small molecule binding domain JT746_08945 PF04632 Fusaric acid resistance protein family JT746_08950 PF04363 Protein of unknown function (DUF496) JT746_08955 PF02654 Cobalamin-5-phosphate synthase JT746_08960 PF02277 Phosphoribosyltransferase JT746_08965 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain JT746_08965 PF05221 S-adenosyl-L-homocysteine hydrolase JT746_08975 PF14552 Tautomerase enzyme JT746_08980 PF03466 LysR substrate binding domain JT746_08980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_08990 PF00083 Sugar (and other) transporter JT746_08990 PF07690 Major Facilitator Superfamily JT746_09000 PF03707 Bacterial signalling protein N terminal repeat JT746_09000 PF13188 PAS domain JT746_09000 PF00990 Diguanylate cyclase, GGDEF domain JT746_09000 PF00563 EAL domain JT746_09005 PF09313 Domain of unknown function (DUF1971) JT746_09010 PF08956 Domain of unknown function (DUF1869) JT746_09015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_09015 PF03466 LysR substrate binding domain JT746_09025 PF00561 alpha/beta hydrolase fold JT746_09030 PF00990 Diguanylate cyclase, GGDEF domain JT746_09045 PF01554 MatE JT746_09065 PF03852 DNA mismatch endonuclease Vsr JT746_09070 PF01048 Phosphorylase superfamily JT746_09070 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus JT746_09080 PF12146 Serine aminopeptidase, S33 JT746_09090 PF00107 Zinc-binding dehydrogenase JT746_09090 PF08240 Alcohol dehydrogenase GroES-like domain JT746_09095 PF16925 Tetracyclin repressor-like, C-terminal domain JT746_09095 PF00440 Bacterial regulatory proteins, tetR family JT746_09105 PF00999 Sodium/hydrogen exchanger family JT746_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_09115 PF03466 LysR substrate binding domain JT746_09120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_09120 PF03466 LysR substrate binding domain JT746_09125 PF17969 L,D-transpeptidase C-terminal domain JT746_09125 PF03734 L,D-transpeptidase catalytic domain JT746_09130 PF03466 LysR substrate binding domain JT746_09130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_09135 PF01042 Endoribonuclease L-PSP JT746_09145 PF06167 Glucose-regulated metallo-peptidase M90 JT746_09155 PF00267 Gram-negative porin JT746_09165 PF01966 HD domain JT746_09170 PF00145 C-5 cytosine-specific DNA methylase JT746_09170 PF18284 DNA methylase N-terminal domain JT746_09175 PF03852 DNA mismatch endonuclease Vsr JT746_09180 PF00892 EamA-like transporter family JT746_09185 PF05661 Protein of unknown function (DUF808) JT746_09190 PF00990 Diguanylate cyclase, GGDEF domain JT746_09190 PF17151 Periplasmic sensor domain JT746_09195 PF10733 Protein of unknown function (DUF2525) JT746_09200 PF10781 Dextransucrase DSRB JT746_09205 PF00196 Bacterial regulatory proteins, luxR family JT746_09210 PF13987 YedD-like protein JT746_09215 PF02806 Alpha amylase, C-terminal all-beta domain JT746_09215 PF00128 Alpha amylase, catalytic domain JT746_09220 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_09225 PF00291 Pyridoxal-phosphate dependent enzyme JT746_09230 PF00528 Binding-protein-dependent transport system inner membrane component JT746_09235 PF00005 ABC transporter JT746_09240 PF03472 Autoinducer binding domain JT746_09240 PF00196 Bacterial regulatory proteins, luxR family JT746_09245 PF10769 Protein of unknown function (DUF2594) JT746_09250 PF01609 Transposase DDE domain JT746_09250 PF05598 Transposase domain (DUF772) JT746_09255 PF00072 Response regulator receiver domain JT746_09255 PF00196 Bacterial regulatory proteins, luxR family JT746_09260 PF08459 UvrC Helix-hairpin-helix N-terminal JT746_09260 PF01541 GIY-YIG catalytic domain JT746_09260 PF02151 UvrB/uvrC motif JT746_09265 PF01066 CDP-alcohol phosphatidyltransferase JT746_09290 PF00701 Dihydrodipicolinate synthetase family JT746_09295 PF03695 Uncharacterised protein family (UPF0149) JT746_09295 PF02810 SEC-C motif JT746_09300 PF03222 Tryptophan/tyrosine permease family JT746_09305 PF10678 Protein of unknown function (DUF2492) JT746_09310 PF00210 Ferritin-like domain JT746_09325 PF07690 Major Facilitator Superfamily JT746_09330 PF10964 Protein of unknown function (DUF2766) JT746_09345 PF00210 Ferritin-like domain JT746_09350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_09355 PF00005 ABC transporter JT746_09360 PF02653 Branched-chain amino acid transport system / permease component JT746_09365 PF02358 Trehalose-phosphatase JT746_09370 PF00982 Glycosyltransferase family 20 JT746_09375 PF00582 Universal stress protein family JT746_09385 PF07470 Glycosyl Hydrolase Family 88 JT746_09390 PF05746 DALR anticodon binding domain JT746_09390 PF00750 tRNA synthetases class I (R) JT746_09390 PF03485 Arginyl tRNA synthetase N terminal domain JT746_09395 PF06185 YecM protein JT746_09400 PF03932 CutC family JT746_09405 PF08003 Protein of unknown function (DUF1698) JT746_09410 PF13649 Methyltransferase domain JT746_09415 PF01124 MAPEG family JT746_09420 PF01904 Protein of unknown function DUF72 JT746_09425 PF00857 Isochorismatase family JT746_09430 PF02938 GAD domain JT746_09430 PF01336 OB-fold nucleic acid binding domain JT746_09430 PF00152 tRNA synthetases class II (D, K and N) JT746_09435 PF00293 NUDIX domain JT746_09440 PF01709 Transcriptional regulator JT746_09445 PF02075 Crossover junction endodeoxyribonuclease RuvC JT746_09450 PF01330 RuvA N terminal domain JT746_09450 PF07499 RuvA, C-terminal domain JT746_09455 PF05491 RuvB C-terminal winged helix domain JT746_09455 PF05496 Holliday junction DNA helicase RuvB P-loop domain JT746_09455 PF17864 RuvB AAA lid domain JT746_09460 PF00950 ABC 3 transport family JT746_09465 PF00005 ABC transporter JT746_09470 PF01297 Zinc-uptake complex component A periplasmic JT746_09475 PF01551 Peptidase family M23 JT746_09475 PF08525 Opacity-associated protein A N-terminal motif JT746_09475 PF01476 LysM domain JT746_09480 PF03279 Bacterial lipid A biosynthesis acyltransferase JT746_09485 PF00072 Response regulator receiver domain JT746_09490 PF00390 Malic enzyme, N-terminal domain JT746_09490 PF03949 Malic enzyme, NAD binding domain JT746_09500 PF03390 2-hydroxycarboxylate transporter family JT746_09505 PF00224 Pyruvate kinase, barrel domain JT746_09505 PF02887 Pyruvate kinase, alpha/beta domain JT746_09510 PF01380 SIS domain JT746_09510 PF01418 Helix-turn-helix domain, rpiR family JT746_09520 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JT746_09520 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JT746_09525 PF00920 Dehydratase family JT746_09530 PF01081 KDPG and KHG aldolase JT746_09535 PF02222 ATP-grasp domain JT746_09540 PF07130 YebG protein JT746_09550 PF04391 Protein of unknown function (DUF533) JT746_09555 PF00326 Prolyl oligopeptidase family JT746_09555 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JT746_09560 PF00929 Exonuclease JT746_09565 PF06440 DNA polymerase III, theta subunit JT746_09570 PF04234 CopC domain JT746_09575 PF05425 Copper resistance protein D JT746_09580 PF10709 Protein of unknown function (DUF2511) JT746_09590 PF04393 Protein of unknown function (DUF535) JT746_09595 PF00149 Calcineurin-like phosphoesterase JT746_09600 PF07358 Protein of unknown function (DUF1482) JT746_09605 PF07351 Protein of unknown function (DUF1480) JT746_09610 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JT746_09610 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JT746_09610 PF01189 16S rRNA methyltransferase RsmB/F JT746_09615 PF02470 MlaD protein JT746_09620 PF04403 Paraquat-inducible protein A JT746_09625 PF13185 GAF domain JT746_09630 PF17516 ProQ C-terminal domain JT746_09630 PF04352 ProQ/FINO family JT746_09635 PF03572 Peptidase family S41 JT746_09635 PF17804 Tail specific protease N-terminal domain JT746_09635 PF11818 C-terminal domain of tail specific protease (DUF3340) JT746_09635 PF00595 PDZ domain JT746_09640 PF01435 Peptidase family M48 JT746_09645 PF07690 Major Facilitator Superfamily JT746_09650 PF09339 IclR helix-turn-helix domain JT746_09650 PF01614 Bacterial transcriptional regulator JT746_09655 PF13996 YobH-like protein JT746_09660 PF13998 MgrB protein JT746_09665 PF13974 YebO-like protein JT746_09670 PF10736 Protein of unknown function (DUF2627) JT746_09675 PF00313 'Cold-shock' DNA-binding domain JT746_09680 PF00905 Penicillin binding protein transpeptidase domain JT746_09680 PF03717 Penicillin-binding Protein dimerisation domain JT746_09685 PF13847 Methyltransferase domain JT746_09690 PF02659 Putative manganese efflux pump JT746_09695 PF06173 Protein of unknown function (DUF986) JT746_09700 PF03613 PTS system mannose/fructose/sorbose family IID component JT746_09705 PF03609 PTS system sorbose-specific iic component JT746_09710 PF03830 PTS system sorbose subfamily IIB component JT746_09710 PF03610 PTS system fructose IIA component JT746_09715 PF03741 Integral membrane protein TerC family JT746_09715 PF03471 Transporter associated domain JT746_09720 PF00563 EAL domain JT746_09720 PF12792 CSS motif domain associated with EAL JT746_09725 PF03315 Serine dehydratase beta chain JT746_09725 PF03313 Serine dehydratase alpha chain JT746_09730 PF00293 NUDIX domain JT746_09735 PF04715 Anthranilate synthase component I, N terminal region JT746_09735 PF00425 chorismate binding enzyme JT746_09740 PF03701 Uncharacterised protein family (UPF0181) JT746_09745 PF01042 Endoribonuclease L-PSP JT746_09750 PF13307 Helicase C-terminal domain JT746_09750 PF04851 Type III restriction enzyme, res subunit JT746_09755 PF00814 Glycoprotease family JT746_09760 PF03843 Outer membrane lipoprotein Slp family JT746_09765 PF00501 AMP-binding enzyme JT746_09765 PF13193 AMP-binding enzyme C-terminal domain JT746_09770 PF00570 HRDC domain JT746_09770 PF01612 3'-5' exonuclease JT746_09775 PF03776 Septum formation topological specificity factor MinE JT746_09780 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JT746_09785 PF05209 Septum formation inhibitor MinC, N-terminal domain JT746_09785 PF03775 Septum formation inhibitor MinC, C-terminal domain JT746_09790 PF05166 YcgL domain JT746_09795 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_09800 PF03692 Putative zinc- or iron-chelating domain JT746_09810 PF02600 Disulfide bond formation protein DsbB JT746_09815 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JT746_09820 PF07840 FadR C-terminal domain JT746_09820 PF00392 Bacterial regulatory proteins, gntR family JT746_09825 PF04293 SpoVR like protein JT746_09835 PF01266 FAD dependent oxidoreductase JT746_09840 PF01168 Alanine racemase, N-terminal domain JT746_09840 PF00842 Alanine racemase, C-terminal domain JT746_09845 PF02080 TrkA-C domain JT746_09845 PF03471 Transporter associated domain JT746_09845 PF00999 Sodium/hydrogen exchanger family JT746_09850 PF17676 LD-carboxypeptidase C-terminal domain JT746_09850 PF02016 LD-carboxypeptidase N-terminal domain JT746_09855 PF01464 Transglycosylase SLT domain JT746_09860 PF00593 TonB dependent receptor JT746_09860 PF07715 TonB-dependent Receptor Plug Domain JT746_09865 PF01204 Trehalase JT746_09870 PF14403 Circularly permuted ATP-grasp type 2 JT746_09890 PF00005 ABC transporter JT746_09890 PF03459 TOBE domain JT746_09890 PF17912 MalK OB fold domain JT746_09895 PF00294 pfkB family carbohydrate kinase JT746_09900 PF00528 Binding-protein-dependent transport system inner membrane component JT746_09905 PF00528 Binding-protein-dependent transport system inner membrane component JT746_09910 PF01547 Bacterial extracellular solute-binding protein JT746_09915 PF00480 ROK family JT746_09930 PF00296 Luciferase-like monooxygenase JT746_09935 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT746_09940 PF00528 Binding-protein-dependent transport system inner membrane component JT746_09945 PF00528 Binding-protein-dependent transport system inner membrane component JT746_09950 PF00005 ABC transporter JT746_09950 PF00571 CBS domain JT746_09960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_09960 PF03466 LysR substrate binding domain JT746_09965 PF00291 Pyridoxal-phosphate dependent enzyme JT746_09970 PF03222 Tryptophan/tyrosine permease family JT746_09975 PF00871 Acetokinase family JT746_09980 PF02901 Pyruvate formate lyase-like JT746_09980 PF01228 Glycine radical JT746_09990 PF13458 Periplasmic binding protein JT746_09995 PF02653 Branched-chain amino acid transport system / permease component JT746_10000 PF11862 Domain of unknown function (DUF3382) JT746_10000 PF02653 Branched-chain amino acid transport system / permease component JT746_10005 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT746_10005 PF00005 ABC transporter JT746_10010 PF00005 ABC transporter JT746_10015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10015 PF03466 LysR substrate binding domain JT746_10020 PF01293 Phosphoenolpyruvate carboxykinase JT746_10030 PF03466 LysR substrate binding domain JT746_10030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10035 PF07690 Major Facilitator Superfamily JT746_10045 PF03466 LysR substrate binding domain JT746_10045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10055 PF00849 RNA pseudouridylate synthase JT746_10060 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JT746_10080 PF00691 OmpA family JT746_10080 PF13488 Glycine zipper JT746_10090 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JT746_10090 PF04717 Type VI secretion system, phage-baseplate injector JT746_10090 PF13296 Putative type VI secretion system Rhs element Vgr JT746_10160 PF13407 Periplasmic binding protein domain JT746_10170 PF06071 Protein of unknown function (DUF933) JT746_10170 PF01926 50S ribosome-binding GTPase JT746_10175 PF01195 Peptidyl-tRNA hydrolase JT746_10180 PF10762 Protein of unknown function (DUF2583) JT746_10190 PF00916 Sulfate permease family JT746_10190 PF01740 STAS domain JT746_10195 PF14572 Phosphoribosyl synthetase-associated domain JT746_10195 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JT746_10200 PF08544 GHMP kinases C terminal JT746_10200 PF00288 GHMP kinases N terminal domain JT746_10205 PF03550 Outer membrane lipoprotein LolB JT746_10210 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JT746_10210 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JT746_10210 PF01488 Shikimate / quinate 5-dehydrogenase JT746_10215 PF00472 RF-1 domain JT746_10215 PF03462 PCRF domain JT746_10220 PF13847 Methyltransferase domain JT746_10220 PF17827 PrmC N-terminal domain JT746_10225 PF04247 Invasion gene expression up-regulator, SirB JT746_10230 PF13369 Transglutaminase-like superfamily JT746_10235 PF00793 DAHP synthetase I family JT746_10240 PF01699 Sodium/calcium exchanger protein JT746_10245 PF06150 ChaB JT746_10250 PF04752 ChaC-like protein JT746_10260 PF02635 DsrE/DsrF-like family JT746_10265 PF08376 Nitrate and nitrite sensing JT746_10265 PF03861 ANTAR domain JT746_10275 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10280 PF00005 ABC transporter JT746_10285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_10285 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JT746_10285 PF13806 Rieske-like [2Fe-2S] domain JT746_10285 PF18267 Rubredoxin NAD+ reductase C-terminal domain JT746_10285 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JT746_10285 PF04324 BFD-like [2Fe-2S] binding domain JT746_10290 PF04324 BFD-like [2Fe-2S] binding domain JT746_10290 PF00384 Molybdopterin oxidoreductase JT746_10290 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT746_10290 PF01568 Molydopterin dinucleotide binding domain JT746_10295 PF11924 Inverse autotransporter, beta-domain JT746_10300 PF00072 Response regulator receiver domain JT746_10300 PF00196 Bacterial regulatory proteins, luxR family JT746_10305 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JT746_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_10305 PF07730 Histidine kinase JT746_10305 PF00672 HAMP domain JT746_10310 PF07690 Major Facilitator Superfamily JT746_10315 PF01568 Molydopterin dinucleotide binding domain JT746_10315 PF14710 Respiratory nitrate reductase alpha N-terminal JT746_10315 PF00384 Molybdopterin oxidoreductase JT746_10320 PF14711 Respiratory nitrate reductase beta C-terminal JT746_10320 PF13247 4Fe-4S dicluster domain JT746_10325 PF02613 Nitrate reductase delta subunit JT746_10330 PF02665 Nitrate reductase gamma subunit JT746_10340 PF01037 Lrp/AsnC ligand binding domain JT746_10360 PF00551 Formyl transferase JT746_10360 PF01842 ACT domain JT746_10365 PF02810 SEC-C motif JT746_10370 PF01734 Patatin-like phospholipase JT746_10375 PF00072 Response regulator receiver domain JT746_10380 PF00483 Nucleotidyl transferase JT746_10385 PF00816 H-NS histone family JT746_10395 PF00265 Thymidine kinase JT746_10400 PF00465 Iron-containing alcohol dehydrogenase JT746_10400 PF00171 Aldehyde dehydrogenase family JT746_10410 PF01914 MarC family integral membrane protein JT746_10415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_10420 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10425 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_10425 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10430 PF00005 ABC transporter JT746_10430 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_10435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_10435 PF00005 ABC transporter JT746_10440 PF00027 Cyclic nucleotide-binding domain JT746_10440 PF00520 Ion transport protein JT746_10445 PF04269 Protein of unknown function, DUF440 JT746_10450 PF13091 PLD-like domain JT746_10450 PF13396 Phospholipase_D-nuclease N-terminal JT746_10460 PF04264 YceI-like domain JT746_10465 PF03795 YCII-related domain JT746_10470 PF03544 Gram-negative bacterial TonB protein C-terminal JT746_10475 PF03881 Fructosamine kinase JT746_10480 PF11080 Endoribonuclease GhoS JT746_10485 PF00294 pfkB family carbohydrate kinase JT746_10490 PF04338 Protein of unknown function, DUF481 JT746_10500 PF02824 TGS domain JT746_10500 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JT746_10500 PF03129 Anticodon binding domain JT746_10500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT746_10505 PF05198 Translation initiation factor IF-3, N-terminal domain JT746_10505 PF00707 Translation initiation factor IF-3, C-terminal domain JT746_10510 PF01632 Ribosomal protein L35 JT746_10515 PF00453 Ribosomal protein L20 JT746_10525 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JT746_10525 PF01409 tRNA synthetases class II core domain (F) JT746_10530 PF03483 B3/4 domain JT746_10530 PF01588 Putative tRNA binding domain JT746_10530 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JT746_10530 PF03147 Ferredoxin-fold anticodon binding domain JT746_10530 PF03484 tRNA synthetase B5 domain JT746_10535 PF00216 Bacterial DNA-binding protein JT746_10545 PF01266 FAD dependent oxidoreductase JT746_10550 PF03466 LysR substrate binding domain JT746_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10560 PF01032 FecCD transport family JT746_10565 PF03180 NLPA lipoprotein JT746_10570 PF00255 Glutathione peroxidase JT746_10575 PF00005 ABC transporter JT746_10580 PF00877 NlpC/P60 family JT746_10585 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JT746_10590 PF10636 Hemin uptake protein hemP JT746_10595 PF00793 DAHP synthetase I family JT746_10600 PF03618 Kinase/pyrophosphorylase JT746_10610 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JT746_10610 PF02896 PEP-utilising enzyme, TIM barrel domain JT746_10610 PF00391 PEP-utilising enzyme, mobile domain JT746_10620 PF01594 AI-2E family transporter JT746_10625 PF02913 FAD linked oxidases, C-terminal domain JT746_10625 PF13183 4Fe-4S dicluster domain JT746_10625 PF01565 FAD binding domain JT746_10630 PF03061 Thioesterase superfamily JT746_10635 PF04226 Transglycosylase associated protein JT746_10650 PF08267 Cobalamin-independent synthase, N-terminal domain JT746_10650 PF01717 Cobalamin-independent synthase, Catalytic domain JT746_10655 PF07690 Major Facilitator Superfamily JT746_10660 PF00005 ABC transporter JT746_10665 PF01032 FecCD transport family JT746_10675 PF03466 LysR substrate binding domain JT746_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10695 PF00873 AcrB/AcrD/AcrF family JT746_10700 PF01070 FMN-dependent dehydrogenase JT746_10710 PF01521 Iron-sulphur cluster biosynthesis JT746_10715 PF01458 Uncharacterized protein family (UPF0051) JT746_10720 PF00005 ABC transporter JT746_10725 PF01458 Uncharacterized protein family (UPF0051) JT746_10730 PF00266 Aminotransferase class-V JT746_10735 PF02657 Fe-S metabolism associated domain JT746_10740 PF17969 L,D-transpeptidase C-terminal domain JT746_10740 PF01476 LysM domain JT746_10740 PF03734 L,D-transpeptidase catalytic domain JT746_10745 PF04728 Lipoprotein leucine-zipper JT746_10750 PF02887 Pyruvate kinase, alpha/beta domain JT746_10750 PF00224 Pyruvate kinase, barrel domain JT746_10760 PF10965 Protein of unknown function (DUF2767) JT746_10765 PF17926 Tetracyclin repressor-like, C-terminal domain JT746_10765 PF00440 Bacterial regulatory proteins, tetR family JT746_10770 PF01261 Xylose isomerase-like TIM barrel JT746_10770 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT746_10775 PF07690 Major Facilitator Superfamily JT746_10780 PF08501 Shikimate dehydrogenase substrate binding domain JT746_10780 PF01488 Shikimate / quinate 5-dehydrogenase JT746_10780 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT746_10790 PF00005 ABC transporter JT746_10795 PF01032 FecCD transport family JT746_10800 PF01497 Periplasmic binding protein JT746_10805 PF01614 Bacterial transcriptional regulator JT746_10805 PF09339 IclR helix-turn-helix domain JT746_10810 PF01494 FAD binding domain JT746_10815 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT746_10820 PF12697 Alpha/beta hydrolase family JT746_10825 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_10830 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT746_10830 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation JT746_10835 PF07836 DmpG-like communication domain JT746_10835 PF00682 HMGL-like JT746_10840 PF07690 Major Facilitator Superfamily JT746_10845 PF02578 Multi-copper polyphenol oxidoreductase laccase JT746_10855 PF05995 Cysteine dioxygenase type I JT746_10860 PF03466 LysR substrate binding domain JT746_10860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_10865 PF00296 Luciferase-like monooxygenase JT746_10870 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JT746_10870 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JT746_10885 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10890 PF00005 ABC transporter JT746_10895 PF07715 TonB-dependent Receptor Plug Domain JT746_10900 PF00005 ABC transporter JT746_10905 PF01032 FecCD transport family JT746_10910 PF01032 FecCD transport family JT746_10925 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_10930 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10935 PF00005 ABC transporter JT746_10965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT746_10965 PF00384 Molybdopterin oxidoreductase JT746_10965 PF01568 Molydopterin dinucleotide binding domain JT746_10970 PF02615 Malate/L-lactate dehydrogenase JT746_10980 PF00528 Binding-protein-dependent transport system inner membrane component JT746_10985 PF08402 TOBE domain JT746_10985 PF00005 ABC transporter JT746_10995 PF13618 Gluconate 2-dehydrogenase subunit 3 JT746_11000 PF05199 GMC oxidoreductase JT746_11000 PF00732 GMC oxidoreductase JT746_11005 PF00034 Cytochrome c JT746_11005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JT746_11010 PF00005 ABC transporter JT746_11015 PF03379 CcmB protein JT746_11020 PF01578 Cytochrome C assembly protein JT746_11030 PF03100 CcmE JT746_11035 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JT746_11035 PF01578 Cytochrome C assembly protein JT746_11040 PF08534 Redoxin JT746_11045 PF03918 Cytochrome C biogenesis protein JT746_11060 PF03544 Gram-negative bacterial TonB protein C-terminal JT746_11065 PF00106 short chain dehydrogenase JT746_11070 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_11070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_11070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_11075 PF03306 Alpha-acetolactate decarboxylase JT746_11080 PF03466 LysR substrate binding domain JT746_11080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11085 PF00106 short chain dehydrogenase JT746_11095 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT746_11095 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT746_11100 PF02803 Thiolase, C-terminal domain JT746_11100 PF00108 Thiolase, N-terminal domain JT746_11105 PF01144 Coenzyme A transferase JT746_11110 PF01144 Coenzyme A transferase JT746_11115 PF03466 LysR substrate binding domain JT746_11115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11130 PF07690 Major Facilitator Superfamily JT746_11135 PF01638 HxlR-like helix-turn-helix JT746_11145 PF07690 Major Facilitator Superfamily JT746_11175 PF02913 FAD linked oxidases, C-terminal domain JT746_11175 PF01565 FAD binding domain JT746_11180 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11185 PF00005 ABC transporter JT746_11195 PF02633 Creatinine amidohydrolase JT746_11200 PF01042 Endoribonuclease L-PSP JT746_11205 PF07969 Amidohydrolase family JT746_11210 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_11210 PF00175 Oxidoreductase NAD-binding domain JT746_11215 PF03466 LysR substrate binding domain JT746_11215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11225 PF01979 Amidohydrolase family JT746_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11245 PF03466 LysR substrate binding domain JT746_11250 PF07690 Major Facilitator Superfamily JT746_11270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_11270 PF00005 ABC transporter JT746_11275 PF00005 ABC transporter JT746_11275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_11280 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11285 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_11300 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT746_11305 PF08220 DeoR-like helix-turn-helix domain JT746_11305 PF00455 DeoR C terminal sensor domain JT746_11315 PF00484 Carbonic anhydrase JT746_11320 PF00107 Zinc-binding dehydrogenase JT746_11320 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_11320 PF08659 KR domain JT746_11320 PF16197 Ketoacyl-synthetase C-terminal extension JT746_11320 PF00698 Acyl transferase domain JT746_11320 PF08240 Alcohol dehydrogenase GroES-like domain JT746_11320 PF14765 Polyketide synthase dehydratase JT746_11320 PF00550 Phosphopantetheine attachment site JT746_11320 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_11345 PF16123 Hydroxyacylglutathione hydrolase C-terminus JT746_11345 PF00753 Metallo-beta-lactamase superfamily JT746_11355 PF03466 LysR substrate binding domain JT746_11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11365 PF00106 short chain dehydrogenase JT746_11385 PF03641 Possible lysine decarboxylase JT746_11395 PF01554 MatE JT746_11400 PF00677 Lumazine binding domain JT746_11410 PF07690 Major Facilitator Superfamily JT746_11415 PF03466 LysR substrate binding domain JT746_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11420 PF00356 Bacterial regulatory proteins, lacI family JT746_11430 PF07690 Major Facilitator Superfamily JT746_11435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JT746_11435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JT746_11445 PF00877 NlpC/P60 family JT746_11450 PF00462 Glutaredoxin JT746_11455 PF00929 Exonuclease JT746_11460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT746_11465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT746_11470 PF16925 Tetracyclin repressor-like, C-terminal domain JT746_11470 PF00440 Bacterial regulatory proteins, tetR family JT746_11475 PF06945 Protein of unknown function (DUF1289) JT746_11480 PF00248 Aldo/keto reductase family JT746_11485 PF00080 Copper/zinc superoxide dismutase (SODC) JT746_11490 PF04632 Fusaric acid resistance protein family JT746_11495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_11495 PF00529 HlyD membrane-fusion protein of T1SS JT746_11500 PF07869 Protein of unknown function (DUF1656) JT746_11505 PF01047 MarR family JT746_11510 PF17158 Membrane-associated sensor, integral membrane domain JT746_11510 PF00990 Diguanylate cyclase, GGDEF domain JT746_11515 PF05433 Glycine zipper 2TM domain JT746_11520 PF03702 Anhydro-N-acetylmuramic acid kinase JT746_11525 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme JT746_11530 PF01243 Pyridoxamine 5'-phosphate oxidase JT746_11530 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JT746_11535 PF00579 tRNA synthetases class I (W and Y) JT746_11540 PF08543 Phosphomethylpyrimidine kinase JT746_11545 PF02798 Glutathione S-transferase, N-terminal domain JT746_11545 PF00043 Glutathione S-transferase, C-terminal domain JT746_11550 PF00854 POT family JT746_11555 PF00730 HhH-GPD superfamily base excision DNA repair protein JT746_11555 PF00633 Helix-hairpin-helix motif JT746_11555 PF10576 Iron-sulfur binding domain of endonuclease III JT746_11560 PF02508 Rnf-Nqr subunit, membrane protein JT746_11565 PF04205 FMN-binding domain JT746_11570 PF03116 NQR2, RnfD, RnfE family JT746_11575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JT746_11575 PF10531 SLBB domain JT746_11575 PF12838 4Fe-4S dicluster domain JT746_11575 PF13375 RnfC Barrel sandwich hybrid domain JT746_11580 PF04060 Putative Fe-S cluster JT746_11585 PF02508 Rnf-Nqr subunit, membrane protein JT746_11590 PF10754 Protein of unknown function (DUF2569) JT746_11595 PF05321 Haemolysin expression modulating protein JT746_11600 PF00232 Glycosyl hydrolase family 1 JT746_11610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_11610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_11615 PF00962 Adenosine/AMP deaminase JT746_11630 PF01292 Prokaryotic cytochrome b561 JT746_11635 PF02583 Metal-sensitive transcriptional repressor JT746_11640 PF00107 Zinc-binding dehydrogenase JT746_11640 PF08240 Alcohol dehydrogenase GroES-like domain JT746_11645 PF01011 PQQ enzyme repeat JT746_11650 PF03466 LysR substrate binding domain JT746_11650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_11655 PF00775 Dioxygenase JT746_11660 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal JT746_11660 PF00775 Dioxygenase JT746_11665 PF07063 Domain of unknown function (DUF1338) JT746_11670 PF00135 Carboxylesterase family JT746_11675 PF04349 Periplasmic glucan biosynthesis protein, MdoG JT746_11680 PF13302 Acetyltransferase (GNAT) domain JT746_11685 PF18836 Beta solenoid repeat from YDCK JT746_11690 PF03595 Voltage-dependent anion channel JT746_11695 PF03848 Tellurite resistance protein TehB JT746_11700 PF11769 Protein of unknown function (DUF3313) JT746_11710 PF12833 Helix-turn-helix domain JT746_11710 PF06445 GyrI-like small molecule binding domain JT746_11715 PF03594 Benzoate membrane transport protein JT746_11720 PF01381 Helix-turn-helix JT746_11720 PF07883 Cupin domain JT746_11730 PF01136 Peptidase family U32 JT746_11730 PF12392 Collagenase JT746_11750 PF02322 Cytochrome bd terminal oxidase subunit II JT746_11755 PF01654 Cytochrome bd terminal oxidase subunit I JT746_11760 PF00392 Bacterial regulatory proteins, gntR family JT746_11760 PF00155 Aminotransferase class I and II JT746_11765 PF13416 Bacterial extracellular solute-binding protein JT746_11770 PF00005 ABC transporter JT746_11770 PF08402 TOBE domain JT746_11775 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11780 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11785 PF00171 Aldehyde dehydrogenase family JT746_11805 PF10753 Toxin GhoT_OrtT JT746_11810 PF00561 alpha/beta hydrolase fold JT746_11810 PF00364 Biotin-requiring enzyme JT746_11815 PF00171 Aldehyde dehydrogenase family JT746_11820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_11825 PF10735 Protein of unknown function (DUF2526) JT746_11830 PF04657 Putative inner membrane exporter, YdcZ JT746_11835 PF00583 Acetyltransferase (GNAT) family JT746_11840 PF08671 Anti-repressor SinI JT746_11840 PF01381 Helix-turn-helix JT746_11845 PF16884 N-terminal domain of oxidoreductase JT746_11845 PF00107 Zinc-binding dehydrogenase JT746_11850 PF01156 Inosine-uridine preferring nucleoside hydrolase JT746_11855 PF04175 Protein of unknown function (DUF406) JT746_11860 PF07715 TonB-dependent Receptor Plug Domain JT746_11860 PF00593 TonB dependent receptor JT746_11875 PF00324 Amino acid permease JT746_11880 PF01678 Diaminopimelate epimerase JT746_11885 PF01202 Shikimate kinase JT746_11890 PF00296 Luciferase-like monooxygenase JT746_11895 PF07687 Peptidase dimerisation domain JT746_11895 PF01546 Peptidase family M20/M25/M40 JT746_11900 PF00296 Luciferase-like monooxygenase JT746_11905 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_11905 PF01464 Transglycosylase SLT domain JT746_11915 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11920 PF00005 ABC transporter JT746_11930 PF13417 Glutathione S-transferase, N-terminal domain JT746_11935 PF01361 Tautomerase enzyme JT746_11945 PF11471 Maltoporin periplasmic N-terminal extension JT746_11945 PF02264 LamB porin JT746_11960 PF12833 Helix-turn-helix domain JT746_11960 PF02311 AraC-like ligand binding domain JT746_11965 PF01613 Flavin reductase like domain JT746_11970 PF17912 MalK OB fold domain JT746_11970 PF00005 ABC transporter JT746_11980 PF00528 Binding-protein-dependent transport system inner membrane component JT746_11985 PF00797 N-acetyltransferase JT746_11990 PF02665 Nitrate reductase gamma subunit JT746_11995 PF02613 Nitrate reductase delta subunit JT746_12000 PF13247 4Fe-4S dicluster domain JT746_12000 PF14711 Respiratory nitrate reductase beta C-terminal JT746_12005 PF14710 Respiratory nitrate reductase alpha N-terminal JT746_12005 PF01568 Molydopterin dinucleotide binding domain JT746_12005 PF00384 Molybdopterin oxidoreductase JT746_12010 PF07690 Major Facilitator Superfamily JT746_12020 PF07690 Major Facilitator Superfamily JT746_12025 PF01614 Bacterial transcriptional regulator JT746_12025 PF09339 IclR helix-turn-helix domain JT746_12030 PF13378 Enolase C-terminal domain-like JT746_12030 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT746_12035 PF02426 Muconolactone delta-isomerase JT746_12040 PF04444 Catechol dioxygenase N terminus JT746_12040 PF00775 Dioxygenase JT746_12045 PF00355 Rieske [2Fe-2S] domain JT746_12045 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JT746_12050 PF00866 Ring hydroxylating beta subunit JT746_12055 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_12055 PF00175 Oxidoreductase NAD-binding domain JT746_12055 PF00970 Oxidoreductase FAD-binding domain JT746_12060 PF00106 short chain dehydrogenase JT746_12065 PF00892 EamA-like transporter family JT746_12075 PF13247 4Fe-4S dicluster domain JT746_12075 PF09163 Formate dehydrogenase N, transmembrane JT746_12075 PF12800 4Fe-4S binding domain JT746_12080 PF01292 Prokaryotic cytochrome b561 JT746_12095 PF03976 Polyphosphate kinase 2 (PPK2) JT746_12105 PF07690 Major Facilitator Superfamily JT746_12115 PF00296 Luciferase-like monooxygenase JT746_12120 PF00005 ABC transporter JT746_12120 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_12125 PF00528 Binding-protein-dependent transport system inner membrane component JT746_12125 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_12130 PF00528 Binding-protein-dependent transport system inner membrane component JT746_12135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_12140 PF08240 Alcohol dehydrogenase GroES-like domain JT746_12140 PF00107 Zinc-binding dehydrogenase JT746_12145 PF00719 Inorganic pyrophosphatase JT746_12160 PF12848 ABC transporter JT746_12160 PF00005 ABC transporter JT746_12165 PF00390 Malic enzyme, N-terminal domain JT746_12165 PF03949 Malic enzyme, NAD binding domain JT746_12175 PF08136 30S ribosomal protein subunit S22 family JT746_12185 PF03466 LysR substrate binding domain JT746_12185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12190 PF10820 Protein of unknown function (DUF2543) JT746_12200 PF10685 Stress-induced bacterial acidophilic repeat motif JT746_12210 PF05974 Domain of unknown function (DUF892) JT746_12220 PF00128 Alpha amylase, catalytic domain JT746_12220 PF16657 Maltogenic Amylase, C-terminal domain JT746_12225 PF00106 short chain dehydrogenase JT746_12230 PF04239 Protein of unknown function (DUF421) JT746_12240 PF04076 Bacterial OB fold (BOF) protein JT746_12250 PF02566 OsmC-like protein JT746_12265 PF01545 Cation efflux family JT746_12265 PF16916 Dimerisation domain of Zinc Transporter JT746_12270 PF01062 Bestrophin, RFP-TM, chloride channel JT746_12275 PF00384 Molybdopterin oxidoreductase JT746_12280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12280 PF03466 LysR substrate binding domain JT746_12285 PF00083 Sugar (and other) transporter JT746_12290 PF02308 MgtC family JT746_12295 PF03969 AFG1-like ATPase JT746_12300 PF00141 Peroxidase JT746_12310 PF03717 Penicillin-binding Protein dimerisation domain JT746_12310 PF00905 Penicillin binding protein transpeptidase domain JT746_12315 PF02540 NAD synthase JT746_12315 PF00958 GMP synthase C terminal domain JT746_12315 PF00117 Glutamine amidotransferase class-I JT746_12320 PF00675 Insulinase (Peptidase family M16) JT746_12325 PF04055 Radical SAM superfamily JT746_12325 PF13186 Iron-sulfur cluster-binding domain JT746_12330 PF05402 Coenzyme PQQ synthesis protein D (PqqD) JT746_12335 PF03070 TENA/THI-4/PQQC family JT746_12340 PF12706 Beta-lactamase superfamily domain JT746_12345 PF08042 PqqA family JT746_12350 PF01244 Membrane dipeptidase (Peptidase family M19) JT746_12355 PF00561 alpha/beta hydrolase fold JT746_12360 PF00072 Response regulator receiver domain JT746_12360 PF00486 Transcriptional regulatory protein, C terminal JT746_12365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_12365 PF00672 HAMP domain JT746_12365 PF00512 His Kinase A (phospho-acceptor) domain JT746_12370 PF00578 AhpC/TSA family JT746_12370 PF17991 Thioredoxin like C-terminal domain JT746_12370 PF02683 Cytochrome C biogenesis protein transmembrane region JT746_12375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12375 PF03466 LysR substrate binding domain JT746_12380 PF00282 Pyridoxal-dependent decarboxylase conserved domain JT746_12385 PF00202 Aminotransferase class-III JT746_12390 PF09084 NMT1/THI5 like JT746_12395 PF00528 Binding-protein-dependent transport system inner membrane component JT746_12400 PF00005 ABC transporter JT746_12405 PF03070 TENA/THI-4/PQQC family JT746_12425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_12425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_12435 PF00356 Bacterial regulatory proteins, lacI family JT746_12440 PF08448 PAS fold JT746_12440 PF00990 Diguanylate cyclase, GGDEF domain JT746_12450 PF01979 Amidohydrolase family JT746_12455 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JT746_12465 PF01177 Asp/Glu/Hydantoin racemase JT746_12490 PF00300 Histidine phosphatase superfamily (branch 1) JT746_12495 PF02028 BCCT, betaine/carnitine/choline family transporter JT746_12500 PF10011 Predicted membrane protein (DUF2254) JT746_12510 PF00117 Glutamine amidotransferase class-I JT746_12515 PF02311 AraC-like ligand binding domain JT746_12515 PF12833 Helix-turn-helix domain JT746_12520 PF12795 Mechanosensitive ion channel porin domain JT746_12520 PF12794 Mechanosensitive ion channel inner membrane domain 1 JT746_12520 PF00924 Mechanosensitive ion channel JT746_12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12540 PF03466 LysR substrate binding domain JT746_12555 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_12555 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_12570 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT746_12570 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT746_12580 PF01425 Amidase JT746_12605 PF00528 Binding-protein-dependent transport system inner membrane component JT746_12610 PF00528 Binding-protein-dependent transport system inner membrane component JT746_12615 PF00005 ABC transporter JT746_12620 PF00266 Aminotransferase class-V JT746_12625 PF07687 Peptidase dimerisation domain JT746_12625 PF01546 Peptidase family M20/M25/M40 JT746_12630 PF03060 Nitronate monooxygenase JT746_12635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12635 PF03466 LysR substrate binding domain JT746_12645 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT746_12650 PF13454 FAD-NAD(P)-binding JT746_12655 PF00083 Sugar (and other) transporter JT746_12655 PF07690 Major Facilitator Superfamily JT746_12670 PF00440 Bacterial regulatory proteins, tetR family JT746_12685 PF07690 Major Facilitator Superfamily JT746_12715 PF12857 TOBE-like domain JT746_12715 PF00005 ABC transporter JT746_12725 PF09347 Domain of unknown function (DUF1989) JT746_12730 PF02785 Biotin carboxylase C-terminal domain JT746_12730 PF00289 Biotin carboxylase, N-terminal domain JT746_12730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT746_12735 PF01425 Amidase JT746_12755 PF00356 Bacterial regulatory proteins, lacI family JT746_12770 PF13954 PapC N-terminal domain JT746_12770 PF13953 PapC C-terminal domain JT746_12770 PF00577 Outer membrane usher protein JT746_12775 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_12775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_12785 PF15977 Winged helix-turn-helix DNA binding JT746_12800 PF03466 LysR substrate binding domain JT746_12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12810 PF01546 Peptidase family M20/M25/M40 JT746_12810 PF07687 Peptidase dimerisation domain JT746_12820 PF02126 Phosphotriesterase family JT746_12825 PF02653 Branched-chain amino acid transport system / permease component JT746_12830 PF00005 ABC transporter JT746_12835 PF00356 Bacterial regulatory proteins, lacI family JT746_12845 PF00294 pfkB family carbohydrate kinase JT746_12860 PF01476 LysM domain JT746_12860 PF04972 BON domain JT746_12865 PF07690 Major Facilitator Superfamily JT746_12875 PF00512 His Kinase A (phospho-acceptor) domain JT746_12875 PF00672 HAMP domain JT746_12875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_12880 PF02954 Bacterial regulatory protein, Fis family JT746_12880 PF14532 Sigma-54 interaction domain JT746_12880 PF00072 Response regulator receiver domain JT746_12900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_12900 PF03466 LysR substrate binding domain JT746_12915 PF00455 DeoR C terminal sensor domain JT746_12915 PF08220 DeoR-like helix-turn-helix domain JT746_12920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_12920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_12925 PF01791 DeoC/LacD family aldolase JT746_12930 PF08220 DeoR-like helix-turn-helix domain JT746_12930 PF00455 DeoR C terminal sensor domain JT746_12935 PF00834 Ribulose-phosphate 3 epimerase family JT746_12940 PF00294 pfkB family carbohydrate kinase JT746_12945 PF07690 Major Facilitator Superfamily JT746_12955 PF00501 AMP-binding enzyme JT746_12955 PF13193 AMP-binding enzyme C-terminal domain JT746_12960 PF01144 Coenzyme A transferase JT746_12970 PF00108 Thiolase, N-terminal domain JT746_12970 PF02803 Thiolase, C-terminal domain JT746_12975 PF07690 Major Facilitator Superfamily JT746_12980 PF08450 SMP-30/Gluconolactonase/LRE-like region JT746_12990 PF02595 Glycerate kinase family JT746_12995 PF13556 PucR C-terminal helix-turn-helix domain JT746_12995 PF17853 GGDEF-like domain JT746_12995 PF05651 Putative sugar diacid recognition JT746_13000 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT746_13000 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT746_13015 PF00392 Bacterial regulatory proteins, gntR family JT746_13015 PF07729 FCD domain JT746_13020 PF02378 Phosphotransferase system, EIIC JT746_13020 PF00367 phosphotransferase system, EIIB JT746_13025 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_13025 PF02056 Family 4 glycosyl hydrolase JT746_13030 PF00083 Sugar (and other) transporter JT746_13035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_13035 PF00381 PTS HPr component phosphorylation site JT746_13050 PF00756 Putative esterase JT746_13055 PF00563 EAL domain JT746_13055 PF13188 PAS domain JT746_13055 PF00990 Diguanylate cyclase, GGDEF domain JT746_13055 PF03707 Bacterial signalling protein N terminal repeat JT746_13070 PF00557 Metallopeptidase family M24 JT746_13085 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_13085 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_13090 PF13953 PapC C-terminal domain JT746_13090 PF00577 Outer membrane usher protein JT746_13090 PF13954 PapC N-terminal domain JT746_13100 PF02638 Glycosyl hydrolase-like 10 JT746_13105 PF13657 HipA N-terminal domain JT746_13105 PF07804 HipA-like C-terminal domain JT746_13110 PF01381 Helix-turn-helix JT746_13115 PF00576 HIUase/Transthyretin family JT746_13120 PF09349 OHCU decarboxylase JT746_13120 PF01014 Uricase JT746_13125 PF00860 Permease family JT746_13130 PF01494 FAD binding domain JT746_13135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13135 PF03466 LysR substrate binding domain JT746_13140 PF00355 Rieske [2Fe-2S] domain JT746_13145 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_13150 PF07690 Major Facilitator Superfamily JT746_13155 PF12833 Helix-turn-helix domain JT746_13170 PF09905 DNA-binding protein VF530 JT746_13180 PF03180 NLPA lipoprotein JT746_13185 PF00005 ABC transporter JT746_13185 PF09383 NIL domain JT746_13190 PF00528 Binding-protein-dependent transport system inner membrane component JT746_13195 PF03060 Nitronate monooxygenase JT746_13200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13200 PF03466 LysR substrate binding domain JT746_13215 PF07690 Major Facilitator Superfamily JT746_13225 PF13649 Methyltransferase domain JT746_13240 PF00583 Acetyltransferase (GNAT) family JT746_13245 PF01232 Mannitol dehydrogenase Rossmann domain JT746_13245 PF08125 Mannitol dehydrogenase C-terminal domain JT746_13255 PF00990 Diguanylate cyclase, GGDEF domain JT746_13260 PF13811 Domain of unknown function (DUF4186) JT746_13265 PF04960 Glutaminase JT746_13270 PF00171 Aldehyde dehydrogenase family JT746_13275 PF03466 LysR substrate binding domain JT746_13275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13280 PF00583 Acetyltransferase (GNAT) family JT746_13285 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JT746_13285 PF00056 lactate/malate dehydrogenase, NAD binding domain JT746_13290 PF08220 DeoR-like helix-turn-helix domain JT746_13290 PF00455 DeoR C terminal sensor domain JT746_13295 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JT746_13300 PF07005 Sugar-binding N-terminal domain JT746_13300 PF17042 Nucleotide-binding C-terminal domain JT746_13305 PF00465 Iron-containing alcohol dehydrogenase JT746_13310 PF00701 Dihydrodipicolinate synthetase family JT746_13315 PF01842 ACT domain JT746_13315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_13315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_13320 PF07690 Major Facilitator Superfamily JT746_13325 PF02567 Phenazine biosynthesis-like protein JT746_13330 PF07690 Major Facilitator Superfamily JT746_13335 PF01914 MarC family integral membrane protein JT746_13340 PF01047 MarR family JT746_13345 PF12833 Helix-turn-helix domain JT746_13350 PF13999 MarB protein JT746_13355 PF00892 EamA-like transporter family JT746_13360 PF07690 Major Facilitator Superfamily JT746_13370 PF00005 ABC transporter JT746_13375 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT746_13375 PF00005 ABC transporter JT746_13380 PF02653 Branched-chain amino acid transport system / permease component JT746_13385 PF02653 Branched-chain amino acid transport system / permease component JT746_13390 PF02954 Bacterial regulatory protein, Fis family JT746_13390 PF13188 PAS domain JT746_13390 PF00158 Sigma-54 interaction domain JT746_13395 PF01717 Cobalamin-independent synthase, Catalytic domain JT746_13405 PF01965 DJ-1/PfpI family JT746_13420 PF00356 Bacterial regulatory proteins, lacI family JT746_13425 PF02837 Glycosyl hydrolases family 2, sugar binding domain JT746_13425 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JT746_13425 PF00703 Glycosyl hydrolases family 2 JT746_13425 PF16353 Domain of unknown function(DUF4981) JT746_13425 PF02929 Beta galactosidase small chain JT746_13430 PF01306 LacY proton/sugar symporter JT746_13435 PF02463 RecF/RecN/SMC N terminal domain JT746_13450 PF00455 DeoR C terminal sensor domain JT746_13450 PF08220 DeoR-like helix-turn-helix domain JT746_13455 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JT746_13455 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JT746_13460 PF07005 Sugar-binding N-terminal domain JT746_13460 PF17042 Nucleotide-binding C-terminal domain JT746_13465 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_13470 PF01261 Xylose isomerase-like TIM barrel JT746_13475 PF02447 GntP family permease JT746_13480 PF12833 Helix-turn-helix domain JT746_13495 PF00563 EAL domain JT746_13495 PF04940 Sensors of blue-light using FAD JT746_13500 PF02464 Competence-damaged protein JT746_13505 PF00011 Hsp20/alpha crystallin family JT746_13525 PF02586 SOS response associated peptidase (SRAP) JT746_13530 PF13302 Acetyltransferase (GNAT) domain JT746_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13535 PF03466 LysR substrate binding domain JT746_13540 PF01810 LysE type translocator JT746_13550 PF01432 Peptidase family M3 JT746_13555 PF00106 short chain dehydrogenase JT746_13560 PF00392 Bacterial regulatory proteins, gntR family JT746_13560 PF07729 FCD domain JT746_13565 PF00582 Universal stress protein family JT746_13570 PF01232 Mannitol dehydrogenase Rossmann domain JT746_13570 PF08125 Mannitol dehydrogenase C-terminal domain JT746_13575 PF07690 Major Facilitator Superfamily JT746_13580 PF02694 Uncharacterised BCR, YnfA/UPF0060 family JT746_13585 PF06932 Protein of unknown function (DUF1283) JT746_13590 PF13302 Acetyltransferase (GNAT) domain JT746_13595 PF06788 Uncharacterised protein family (UPF0257) JT746_13600 PF06649 Protein of unknown function (DUF1161) JT746_13605 PF01568 Molydopterin dinucleotide binding domain JT746_13605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JT746_13605 PF00384 Molybdopterin oxidoreductase JT746_13610 PF13247 4Fe-4S dicluster domain JT746_13610 PF12800 4Fe-4S binding domain JT746_13615 PF02613 Nitrate reductase delta subunit JT746_13620 PF00654 Voltage gated chloride channel JT746_13630 PF00480 ROK family JT746_13635 PF03466 LysR substrate binding domain JT746_13635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13640 PF07690 Major Facilitator Superfamily JT746_13645 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JT746_13655 PF00089 Trypsin JT746_13660 PF00563 EAL domain JT746_13660 PF00990 Diguanylate cyclase, GGDEF domain JT746_13660 PF03707 Bacterial signalling protein N terminal repeat JT746_13665 PF00893 Small Multidrug Resistance protein JT746_13670 PF00893 Small Multidrug Resistance protein JT746_13675 PF01594 AI-2E family transporter JT746_13680 PF16957 Malonate decarboxylase, alpha subunit, transporter JT746_13685 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT746_13690 PF06857 Malonate decarboxylase delta subunit (MdcD) JT746_13695 PF01039 Carboxyl transferase domain JT746_13705 PF03547 Membrane transport protein JT746_13710 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG JT746_13715 PF00698 Acyl transferase domain JT746_13720 PF03466 LysR substrate binding domain JT746_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13725 PF06039 Malate:quinone oxidoreductase (Mqo) JT746_13730 PF13580 SIS domain JT746_13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_13740 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JT746_13740 PF17203 Single cache domain 3 JT746_13740 PF00989 PAS fold JT746_13745 PF00072 Response regulator receiver domain JT746_13750 PF02424 ApbE family JT746_13755 PF00890 FAD binding domain JT746_13755 PF14537 Cytochrome c3 JT746_13760 PF00939 Sodium:sulfate symporter transmembrane region JT746_13765 PF05683 Fumarase C-terminus JT746_13765 PF05681 Fumarate hydratase (Fumerase) JT746_13775 PF02627 Carboxymuconolactone decarboxylase family JT746_13780 PF12146 Serine aminopeptidase, S33 JT746_13785 PF10397 Adenylosuccinate lyase C-terminus JT746_13785 PF00206 Lyase JT746_13790 PF00108 Thiolase, N-terminal domain JT746_13790 PF02803 Thiolase, C-terminal domain JT746_13795 PF01144 Coenzyme A transferase JT746_13800 PF01144 Coenzyme A transferase JT746_13805 PF01614 Bacterial transcriptional regulator JT746_13805 PF09339 IclR helix-turn-helix domain JT746_13810 PF01713 Smr domain JT746_13815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_13815 PF03466 LysR substrate binding domain JT746_13820 PF07687 Peptidase dimerisation domain JT746_13820 PF01546 Peptidase family M20/M25/M40 JT746_13825 PF01546 Peptidase family M20/M25/M40 JT746_13830 PF03806 AbgT putative transporter family JT746_13840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JT746_13840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT746_13845 PF00325 Bacterial regulatory proteins, crp family JT746_13845 PF00027 Cyclic nucleotide-binding domain JT746_13850 PF00582 Universal stress protein family JT746_13855 PF15930 Domain of unknown function JT746_13860 PF02233 NAD(P) transhydrogenase beta subunit JT746_13865 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JT746_13865 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JT746_13865 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JT746_13875 PF07338 Protein of unknown function (DUF1471) JT746_13880 PF13520 Amino acid permease JT746_13890 PF06942 GlpM protein JT746_13895 PF00486 Transcriptional regulatory protein, C terminal JT746_13895 PF00072 Response regulator receiver domain JT746_13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_13905 PF00672 HAMP domain JT746_13905 PF00512 His Kinase A (phospho-acceptor) domain JT746_13910 PF05472 DNA replication terminus site-binding protein (Ter protein) JT746_13915 PF00206 Lyase JT746_13915 PF10415 Fumarase C C-terminus JT746_13920 PF05683 Fumarase C-terminus JT746_13920 PF05681 Fumarate hydratase (Fumerase) JT746_13925 PF01238 Phosphomannose isomerase type I JT746_13930 PF06097 Bacterial protein of unknown function (DUF945) JT746_13935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_13935 PF00356 Bacterial regulatory proteins, lacI family JT746_13940 PF02378 Phosphotransferase system, EIIC JT746_13940 PF00367 phosphotransferase system, EIIB JT746_13945 PF00155 Aminotransferase class I and II JT746_13950 PF14001 YdfZ protein JT746_13965 PF04143 Sulphur transport JT746_13970 PF01206 Sulfurtransferase TusA JT746_13975 PF07166 Protein of unknown function (DUF1398) JT746_13980 PF01679 Proteolipid membrane potential modulator JT746_13985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT746_13985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT746_13990 PF00171 Aldehyde dehydrogenase family JT746_14000 PF02698 DUF218 domain JT746_14005 PF07690 Major Facilitator Superfamily JT746_14005 PF00083 Sugar (and other) transporter JT746_14010 PF00324 Amino acid permease JT746_14015 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JT746_14020 PF04996 Succinylarginine dihydrolase JT746_14025 PF00171 Aldehyde dehydrogenase family JT746_14030 PF04958 Arginine N-succinyltransferase beta subunit JT746_14035 PF00202 Aminotransferase class-III JT746_14045 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JT746_14045 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JT746_14060 PF00108 Thiolase, N-terminal domain JT746_14060 PF02803 Thiolase, C-terminal domain JT746_14065 PF01494 FAD binding domain JT746_14070 PF00248 Aldo/keto reductase family JT746_14075 PF07690 Major Facilitator Superfamily JT746_14080 PF00248 Aldo/keto reductase family JT746_14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14085 PF03466 LysR substrate binding domain JT746_14100 PF13533 Biotin-lipoyl like JT746_14105 PF02321 Outer membrane efflux protein JT746_14110 PF01596 O-methyltransferase JT746_14115 PF11898 Domain of unknown function (DUF3418) JT746_14115 PF04408 Helicase associated domain (HA2) JT746_14115 PF00271 Helicase conserved C-terminal domain JT746_14115 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JT746_14115 PF00270 DEAD/DEAH box helicase JT746_14120 PF02525 Flavodoxin-like fold JT746_14130 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_14135 PF08223 PaaX-like protein C-terminal domain JT746_14135 PF07848 PaaX-like protein JT746_14140 PF14535 AMP-binding enzyme C-terminal domain JT746_14140 PF00501 AMP-binding enzyme JT746_14145 PF00108 Thiolase, N-terminal domain JT746_14145 PF02803 Thiolase, C-terminal domain JT746_14150 PF03061 Thioesterase superfamily JT746_14155 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain JT746_14155 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT746_14155 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT746_14160 PF00378 Enoyl-CoA hydratase/isomerase JT746_14165 PF00378 Enoyl-CoA hydratase/isomerase JT746_14170 PF00175 Oxidoreductase NAD-binding domain JT746_14170 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_14170 PF00970 Oxidoreductase FAD-binding domain JT746_14175 PF01883 Iron-sulfur cluster assembly protein JT746_14180 PF05138 Phenylacetic acid catabolic protein JT746_14185 PF06243 Phenylacetic acid degradation B JT746_14190 PF05138 Phenylacetic acid catabolic protein JT746_14195 PF01575 MaoC like domain JT746_14195 PF00171 Aldehyde dehydrogenase family JT746_14200 PF02728 Copper amine oxidase, N3 domain JT746_14200 PF02727 Copper amine oxidase, N2 domain JT746_14200 PF01179 Copper amine oxidase, enzyme domain JT746_14200 PF07833 Copper amine oxidase N-terminal domain JT746_14215 PF01546 Peptidase family M20/M25/M40 JT746_14215 PF07687 Peptidase dimerisation domain JT746_14225 PF01042 Endoribonuclease L-PSP JT746_14235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14235 PF03466 LysR substrate binding domain JT746_14240 PF00005 ABC transporter JT746_14245 PF05721 Phytanoyl-CoA dioxygenase (PhyH) JT746_14250 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_14260 PF08546 Ketopantoate reductase PanE/ApbA C terminal JT746_14260 PF02558 Ketopantoate reductase PanE/ApbA JT746_14265 PF00171 Aldehyde dehydrogenase family JT746_14270 PF12833 Helix-turn-helix domain JT746_14270 PF14525 AraC-binding-like domain JT746_14275 PF07027 Protein of unknown function (DUF1318) JT746_14280 PF13617 YnbE-like lipoprotein JT746_14285 PF11739 Dicarboxylate transport JT746_14290 PF09335 SNARE associated Golgi protein JT746_14295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_14295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_14300 PF03724 META domain JT746_14305 PF03891 Domain of unknown function (DUF333) JT746_14310 PF10371 Domain of unknown function JT746_14310 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JT746_14310 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JT746_14310 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_14310 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JT746_14315 PF00267 Gram-negative porin JT746_14325 PF00582 Universal stress protein family JT746_14330 PF01320 Colicin immunity protein / pyocin immunity protein JT746_14335 PF03544 Gram-negative bacterial TonB protein C-terminal JT746_14345 PF01171 PP-loop family JT746_14350 PF03880 DbpA RNA binding domain JT746_14350 PF00270 DEAD/DEAH box helicase JT746_14350 PF00271 Helicase conserved C-terminal domain JT746_14355 PF01544 CorA-like Mg2+ transporter protein JT746_14360 PF08220 DeoR-like helix-turn-helix domain JT746_14360 PF00455 DeoR C terminal sensor domain JT746_14365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_14365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_14375 PF00324 Amino acid permease JT746_14380 PF01037 Lrp/AsnC ligand binding domain JT746_14390 PF00155 Aminotransferase class I and II JT746_14395 PF00528 Binding-protein-dependent transport system inner membrane component JT746_14400 PF00005 ABC transporter JT746_14400 PF09383 NIL domain JT746_14405 PF03180 NLPA lipoprotein JT746_14410 PF00155 Aminotransferase class I and II JT746_14425 PF00753 Metallo-beta-lactamase superfamily JT746_14440 PF03466 LysR substrate binding domain JT746_14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14535 PF13296 Putative type VI secretion system Rhs element Vgr JT746_14535 PF10106 Uncharacterized protein conserved in bacteria (DUF2345) JT746_14535 PF04717 Type VI secretion system, phage-baseplate injector JT746_14540 PF07724 AAA domain (Cdc48 subfamily) JT746_14540 PF10431 C-terminal, D2-small domain, of ClpB protein JT746_14540 PF00004 ATPase family associated with various cellular activities (AAA) JT746_14540 PF17871 AAA lid domain JT746_14550 PF00691 OmpA family JT746_14550 PF13488 Glycine zipper JT746_14565 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JT746_14575 PF01965 DJ-1/PfpI family JT746_14585 PF03466 LysR substrate binding domain JT746_14585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14605 PF00990 Diguanylate cyclase, GGDEF domain JT746_14605 PF00072 Response regulator receiver domain JT746_14620 PF03170 Bacterial cellulose synthase subunit JT746_14620 PF00535 Glycosyl transferase family 2 JT746_14620 PF07238 PilZ domain JT746_14645 PF01627 Hpt domain JT746_14645 PF00672 HAMP domain JT746_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_14645 PF00512 His Kinase A (phospho-acceptor) domain JT746_14645 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JT746_14645 PF00072 Response regulator receiver domain JT746_14650 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JT746_14650 PF16355 Domain of unknown function (DUF4982) JT746_14650 PF02837 Glycosyl hydrolases family 2, sugar binding domain JT746_14650 PF00703 Glycosyl hydrolases family 2 JT746_14655 PF00248 Aldo/keto reductase family JT746_14660 PF07690 Major Facilitator Superfamily JT746_14665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JT746_14670 PF03466 LysR substrate binding domain JT746_14670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_14690 PF00246 Zinc carboxypeptidase JT746_14695 PF13378 Enolase C-terminal domain-like JT746_14695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JT746_14700 PF08534 Redoxin JT746_14705 PF05145 Transition state regulatory protein AbrB JT746_14710 PF00158 Sigma-54 interaction domain JT746_14710 PF18024 Helix-turn-helix domain JT746_14715 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_14715 PF02056 Family 4 glycosyl hydrolase JT746_14720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14720 PF03466 LysR substrate binding domain JT746_14725 PF05128 Domain of unknown function (DUF697) JT746_14730 PF04317 YcjX-like family, DUF463 JT746_14735 PF09584 Phage shock protein PspD (Phageshock_PspD) JT746_14740 PF04024 PspC domain JT746_14745 PF06667 Phage shock protein B JT746_14750 PF04012 PspA/IM30 family JT746_14755 PF00158 Sigma-54 interaction domain JT746_14755 PF02954 Bacterial regulatory protein, Fis family JT746_14760 PF07690 Major Facilitator Superfamily JT746_14765 PF01546 Peptidase family M20/M25/M40 JT746_14765 PF07687 Peptidase dimerisation domain JT746_14770 PF12833 Helix-turn-helix domain JT746_14780 PF13460 NAD(P)H-binding JT746_14785 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_14790 PF00528 Binding-protein-dependent transport system inner membrane component JT746_14795 PF00528 Binding-protein-dependent transport system inner membrane component JT746_14795 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_14800 PF00005 ABC transporter JT746_14800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_14805 PF00005 ABC transporter JT746_14810 PF00221 Aromatic amino acid lyase JT746_14815 PF00005 ABC transporter JT746_14820 PF00528 Binding-protein-dependent transport system inner membrane component JT746_14825 PF00528 Binding-protein-dependent transport system inner membrane component JT746_14830 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_14835 PF05962 HutD JT746_14850 PF00575 S1 RNA binding domain JT746_14850 PF00773 RNB domain JT746_14850 PF17876 Cold shock domain JT746_14850 PF08206 Ribonuclease B OB domain JT746_14860 PF08220 DeoR-like helix-turn-helix domain JT746_14860 PF00455 DeoR C terminal sensor domain JT746_14865 PF05433 Glycine zipper 2TM domain JT746_14870 PF01253 Translation initiation factor SUI1 JT746_14875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JT746_14880 PF18073 Rubredoxin metal binding domain JT746_14885 PF06305 Lipopolysaccharide assembly protein A domain JT746_14890 PF01569 PAP2 superfamily JT746_14895 PF00925 GTP cyclohydrolase II JT746_14900 PF00330 Aconitase family (aconitate hydratase) JT746_14900 PF00694 Aconitase C-terminal domain JT746_14910 PF03466 LysR substrate binding domain JT746_14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_14915 PF01396 Topoisomerase DNA binding C4 zinc finger JT746_14915 PF08272 Topoisomerase I zinc-ribbon-like JT746_14915 PF01751 Toprim domain JT746_14915 PF01131 DNA topoisomerase JT746_14920 PF10692 Protein of unknown function (DUF2498) JT746_14925 PF01343 Peptidase family S49 JT746_14925 PF08496 Peptidase family S49 N-terminal JT746_14930 PF00106 short chain dehydrogenase JT746_14935 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JT746_14935 PF12557 Cob(I)alamin adenosyltransferase N terminal JT746_14940 PF01479 S4 domain JT746_14940 PF00849 RNA pseudouridylate synthase JT746_14950 PF01300 Telomere recombination JT746_14955 PF02811 PHP domain JT746_14960 PF04715 Anthranilate synthase component I, N terminal region JT746_14960 PF00425 chorismate binding enzyme JT746_14965 PF00117 Glutamine amidotransferase class-I JT746_14965 PF00591 Glycosyl transferase family, a/b domain JT746_14965 PF02885 Glycosyl transferase family, helical bundle domain JT746_14970 PF00218 Indole-3-glycerol phosphate synthase JT746_14970 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JT746_14975 PF00291 Pyridoxal-phosphate dependent enzyme JT746_14980 PF00290 Tryptophan synthase alpha chain JT746_14985 PF13660 Domain of unknown function (DUF4147) JT746_14985 PF05161 MOFRL family JT746_14990 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_14995 PF07690 Major Facilitator Superfamily JT746_15000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15000 PF03466 LysR substrate binding domain JT746_15015 PF00593 TonB dependent receptor JT746_15015 PF07715 TonB-dependent Receptor Plug Domain JT746_15020 PF13640 2OG-Fe(II) oxygenase superfamily JT746_15020 PF18331 PKHD-type hydroxylase C-terminal domain JT746_15025 PF03922 OmpW family JT746_15030 PF03692 Putative zinc- or iron-chelating domain JT746_15040 PF04279 Intracellular septation protein A JT746_15045 PF03061 Thioesterase superfamily JT746_15050 PF14002 YniB-like protein JT746_15055 PF13419 Haloacid dehalogenase-like hydrolase JT746_15065 PF04307 LexA-binding, inner membrane-associated putative hydrolase JT746_15070 PF00375 Sodium:dicarboxylate symporter family JT746_15075 PF10729 Cell division activator CedA JT746_15080 PF00199 Catalase JT746_15080 PF06628 Catalase-related immune-responsive JT746_15080 PF18011 C-terminal domain found in long catalases JT746_15085 PF04794 YdjC-like protein JT746_15090 PF02056 Family 4 glycosyl hydrolase JT746_15090 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_15095 PF07883 Cupin domain JT746_15095 PF12833 Helix-turn-helix domain JT746_15100 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT746_15105 PF02378 Phosphotransferase system, EIIC JT746_15115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_15120 PF04355 SmpA / OmlA family JT746_15125 PF02540 NAD synthase JT746_15135 PF07813 LTXXQ motif family protein JT746_15140 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JT746_15145 PF04996 Succinylarginine dihydrolase JT746_15150 PF00171 Aldehyde dehydrogenase family JT746_15155 PF04958 Arginine N-succinyltransferase beta subunit JT746_15160 PF00202 Aminotransferase class-III JT746_15165 PF03372 Endonuclease/Exonuclease/phosphatase family JT746_15170 PF09335 SNARE associated Golgi protein JT746_15175 PF09335 SNARE associated Golgi protein JT746_15180 PF02627 Carboxymuconolactone decarboxylase family JT746_15185 PF13416 Bacterial extracellular solute-binding protein JT746_15190 PF00528 Binding-protein-dependent transport system inner membrane component JT746_15195 PF00005 ABC transporter JT746_15200 PF00581 Rhodanese-like domain JT746_15205 PF01066 CDP-alcohol phosphatidyltransferase JT746_15210 PF00293 NUDIX domain JT746_15215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JT746_15215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JT746_15225 PF01751 Toprim domain JT746_15225 PF01131 DNA topoisomerase JT746_15230 PF00586 AIR synthase related protein, N-terminal domain JT746_15230 PF02769 AIR synthase related protein, C-terminal domain JT746_15235 PF01569 PAP2 superfamily JT746_15240 PF00881 Nitroreductase family JT746_15245 PF01343 Peptidase family S49 JT746_15250 PF00710 Asparaginase, N-terminal JT746_15250 PF17763 Glutaminase/Asparaginase C-terminal domain JT746_15255 PF00857 Isochorismatase family JT746_15260 PF00041 Fibronectin type III domain JT746_15260 PF00704 Glycosyl hydrolases family 18 JT746_15265 PF01844 HNH endonuclease JT746_15270 PF07023 Protein of unknown function (DUF1315) JT746_15275 PF01641 SelR domain JT746_15280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JT746_15280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JT746_15285 PF01263 Aldose 1-epimerase JT746_15290 PF00248 Aldo/keto reductase family JT746_15295 PF06629 MltA-interacting protein MipA JT746_15300 PF08298 PrkA AAA domain JT746_15300 PF06798 PrkA serine protein kinase C-terminal domain JT746_15305 PF04285 Protein of unknown function (DUF444) JT746_15315 PF00255 Glutathione peroxidase JT746_15330 PF03466 LysR substrate binding domain JT746_15330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15335 PF07690 Major Facilitator Superfamily JT746_15345 PF00005 ABC transporter JT746_15350 PF00528 Binding-protein-dependent transport system inner membrane component JT746_15355 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_15365 PF00202 Aminotransferase class-III JT746_15370 PF01418 Helix-turn-helix domain, rpiR family JT746_15370 PF01380 SIS domain JT746_15380 PF00106 short chain dehydrogenase JT746_15385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15385 PF03466 LysR substrate binding domain JT746_15390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT746_15405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15405 PF03466 LysR substrate binding domain JT746_15425 PF07690 Major Facilitator Superfamily JT746_15430 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_15435 PF13378 Enolase C-terminal domain-like JT746_15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15440 PF03466 LysR substrate binding domain JT746_15445 PF13407 Periplasmic binding protein domain JT746_15450 PF01261 Xylose isomerase-like TIM barrel JT746_15455 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_15455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_15460 PF00083 Sugar (and other) transporter JT746_15465 PF13426 PAS domain JT746_15465 PF00158 Sigma-54 interaction domain JT746_15465 PF02954 Bacterial regulatory protein, Fis family JT746_15475 PF01548 Transposase JT746_15475 PF02371 Transposase IS116/IS110/IS902 family JT746_15490 PF06183 DinI-like family JT746_15495 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JT746_15500 PF04073 Aminoacyl-tRNA editing domain JT746_15505 PF04284 Protein of unknown function (DUF441) JT746_15510 PF02311 AraC-like ligand binding domain JT746_15510 PF12833 Helix-turn-helix domain JT746_15515 PF07690 Major Facilitator Superfamily JT746_15520 PF00117 Glutamine amidotransferase class-I JT746_15520 PF06418 CTP synthase N-terminus JT746_15525 PF04463 Protein of unknown function (DUF523) JT746_15530 PF04343 Protein of unknown function, DUF488 JT746_15535 PF03891 Domain of unknown function (DUF333) JT746_15540 PF04606 Ogr/Delta-like zinc finger JT746_15550 PF04984 Phage tail sheath protein subtilisin-like domain JT746_15550 PF17482 Phage tail sheath C-terminal domain JT746_15685 PF00004 ATPase family associated with various cellular activities (AAA) JT746_15690 PF05840 Bacteriophage replication gene A protein (GPA) JT746_15695 PF02086 D12 class N6 adenine-specific DNA methyltransferase JT746_15735 PF00589 Phage integrase family JT746_15735 PF02899 Phage integrase, N-terminal SAM-like domain JT746_15740 PF13185 GAF domain JT746_15740 PF00990 Diguanylate cyclase, GGDEF domain JT746_15760 PF10749 Protein of unknown function (DUF2534) JT746_15765 PF01810 LysE type translocator JT746_15770 PF03279 Bacterial lipid A biosynthesis acyltransferase JT746_15775 PF00710 Asparaginase, N-terminal JT746_15775 PF17763 Glutaminase/Asparaginase C-terminal domain JT746_15780 PF01966 HD domain JT746_15785 PF00990 Diguanylate cyclase, GGDEF domain JT746_15790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_15790 PF03466 LysR substrate binding domain JT746_15795 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT746_15805 PF00563 EAL domain JT746_15805 PF00196 Bacterial regulatory proteins, luxR family JT746_15825 PF02311 AraC-like ligand binding domain JT746_15825 PF12833 Helix-turn-helix domain JT746_15830 PF04632 Fusaric acid resistance protein family JT746_15840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_15840 PF00529 HlyD membrane-fusion protein of T1SS JT746_15845 PF02322 Cytochrome bd terminal oxidase subunit II JT746_15850 PF01654 Cytochrome bd terminal oxidase subunit I JT746_15855 PF05067 Manganese containing catalase JT746_15860 PF05974 Domain of unknown function (DUF892) JT746_15865 PF05974 Domain of unknown function (DUF892) JT746_15870 PF10685 Stress-induced bacterial acidophilic repeat motif JT746_15875 PF13823 Alcohol dehydrogenase GroES-associated JT746_15875 PF08240 Alcohol dehydrogenase GroES-like domain JT746_15875 PF00107 Zinc-binding dehydrogenase JT746_15880 PF06906 Protein of unknown function (DUF1272) JT746_15890 PF00392 Bacterial regulatory proteins, gntR family JT746_15915 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_15925 PF02586 SOS response associated peptidase (SRAP) JT746_15930 PF01810 LysE type translocator JT746_15935 PF01047 MarR family JT746_15940 PF02566 OsmC-like protein JT746_15945 PF03328 HpcH/HpaI aldolase/citrate lyase family JT746_15950 PF11799 impB/mucB/samB family C-terminal domain JT746_15950 PF00817 impB/mucB/samB family JT746_15950 PF11798 IMS family HHH motif JT746_15950 PF13438 Domain of unknown function (DUF4113) JT746_15955 PF00717 Peptidase S24-like JT746_15965 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_15975 PF00563 EAL domain JT746_15975 PF00990 Diguanylate cyclase, GGDEF domain JT746_15975 PF03707 Bacterial signalling protein N terminal repeat JT746_15975 PF13188 PAS domain JT746_15980 PF00990 Diguanylate cyclase, GGDEF domain JT746_15980 PF05230 MASE2 domain JT746_16065 PF01343 Peptidase family S49 JT746_16080 PF03354 Phage Terminase JT746_16125 PF00959 Phage lysozyme JT746_16130 PF04971 Bacteriophage P21 holin S JT746_16145 PF06147 Protein of unknown function (DUF968) JT746_16150 PF00717 Peptidase S24-like JT746_16150 PF01726 LexA DNA binding domain JT746_16160 PF06183 DinI-like family JT746_16165 PF13005 zinc-finger binding domain of transposase IS66 JT746_16165 PF03050 Transposase IS66 family JT746_16165 PF13817 IS66 C-terminal element JT746_16165 PF13007 Transposase C of IS166 homeodomain JT746_16170 PF05717 IS66 Orf2 like protein JT746_16190 PF00990 Diguanylate cyclase, GGDEF domain JT746_16190 PF00563 EAL domain JT746_16190 PF03707 Bacterial signalling protein N terminal repeat JT746_16230 PF06630 Enterobacterial exodeoxyribonuclease VIII JT746_16230 PF12684 PDDEXK-like domain of unknown function (DUF3799) JT746_16235 PF07825 Excisionase-like protein JT746_16240 PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain JT746_16240 PF00589 Phage integrase family JT746_16245 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_16250 PF00849 RNA pseudouridylate synthase JT746_16255 PF00293 NUDIX domain JT746_16265 PF04356 Protein of unknown function (DUF489) JT746_16270 PF08328 Adenylosuccinate lyase C-terminal JT746_16270 PF00206 Lyase JT746_16285 PF00072 Response regulator receiver domain JT746_16285 PF00486 Transcriptional regulatory protein, C terminal JT746_16290 PF08918 PhoQ Sensor JT746_16290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_16295 PF08007 Cupin superfamily protein JT746_16300 PF07687 Peptidase dimerisation domain JT746_16300 PF01546 Peptidase family M20/M25/M40 JT746_16305 PF00005 ABC transporter JT746_16305 PF08402 TOBE domain JT746_16310 PF00528 Binding-protein-dependent transport system inner membrane component JT746_16315 PF00528 Binding-protein-dependent transport system inner membrane component JT746_16320 PF13416 Bacterial extracellular solute-binding protein JT746_16330 PF00501 AMP-binding enzyme JT746_16330 PF13193 AMP-binding enzyme C-terminal domain JT746_16340 PF02146 Sir2 family JT746_16345 PF00480 ROK family JT746_16350 PF02687 FtsX-like permease family JT746_16350 PF12704 MacB-like periplasmic core domain JT746_16355 PF00005 ABC transporter JT746_16360 PF12704 MacB-like periplasmic core domain JT746_16360 PF02687 FtsX-like permease family JT746_16370 PF03461 TRCF domain JT746_16370 PF02559 CarD-like/TRCF domain JT746_16370 PF00270 DEAD/DEAH box helicase JT746_16370 PF17757 UvrB interaction domain JT746_16370 PF00271 Helicase conserved C-terminal domain JT746_16375 PF17969 L,D-transpeptidase C-terminal domain JT746_16375 PF01476 LysM domain JT746_16375 PF03734 L,D-transpeptidase catalytic domain JT746_16380 PF07338 Protein of unknown function (DUF1471) JT746_16390 PF00440 Bacterial regulatory proteins, tetR family JT746_16400 PF07715 TonB-dependent Receptor Plug Domain JT746_16400 PF00593 TonB dependent receptor JT746_16405 PF05433 Glycine zipper 2TM domain JT746_16410 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_16415 PF05728 Uncharacterised protein family (UPF0227) JT746_16420 PF00933 Glycosyl hydrolase family 3 N terminal domain JT746_16425 PF01636 Phosphotransferase enzyme family JT746_16430 PF13036 Peptidoglycan-synthase activator LpoB JT746_16435 PF07233 Protein of unknown function (DUF1425) JT746_16440 PF01230 HIT domain JT746_16445 PF00367 phosphotransferase system, EIIB JT746_16445 PF02378 Phosphotransferase system, EIIC JT746_16450 PF01026 TatD related DNase JT746_16455 PF09115 DNA polymerase III, delta subunit, C terminal JT746_16460 PF02223 Thymidylate kinase JT746_16465 PF02618 YceG-like family JT746_16470 PF01063 Amino-transferase class IV JT746_16475 PF02801 Beta-ketoacyl synthase, C-terminal domain JT746_16475 PF00109 Beta-ketoacyl synthase, N-terminal domain JT746_16480 PF00550 Phosphopantetheine attachment site JT746_16490 PF00698 Acyl transferase domain JT746_16495 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JT746_16495 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JT746_16500 PF02504 Fatty acid synthesis protein JT746_16505 PF01783 Ribosomal L32p protein family JT746_16510 PF02620 Large ribosomal RNA subunit accumulation protein YceD JT746_16515 PF02545 Maf-like protein JT746_16520 PF00849 RNA pseudouridylate synthase JT746_16520 PF01479 S4 domain JT746_16530 PF12111 Polyribonucleotide phosphorylase C terminal JT746_16530 PF10150 Ribonuclease E/G family JT746_16530 PF00575 S1 RNA binding domain JT746_16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_16535 PF03466 LysR substrate binding domain JT746_16540 PF07690 Major Facilitator Superfamily JT746_16545 PF03023 Lipid II flippase MurJ JT746_16550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_16555 PF04337 Protein of unknown function, DUF480 JT746_16560 PF13302 Acetyltransferase (GNAT) domain JT746_16565 PF07690 Major Facilitator Superfamily JT746_16570 PF07273 Protein of unknown function (DUF1439) JT746_16575 PF01979 Amidohydrolase family JT746_16580 PF06183 DinI-like family JT746_16585 PF13991 BssS protein family JT746_16590 PF01266 FAD dependent oxidoreductase JT746_16595 PF10968 Protein of unknown function (DUF2770) JT746_16600 PF12368 Rhodanase C-terminal JT746_16600 PF00581 Rhodanese-like domain JT746_16600 PF17773 UPF0176 acylphosphatase like domain JT746_16605 PF03279 Bacterial lipid A biosynthesis acyltransferase JT746_16610 PF07690 Major Facilitator Superfamily JT746_16615 PF13984 MsyB protein JT746_16620 PF07119 Protein of unknown function (DUF1375) JT746_16625 PF00535 Glycosyl transferase family 2 JT746_16630 PF04349 Periplasmic glucan biosynthesis protein, MdoG JT746_16635 PF01757 Acyltransferase family JT746_16640 PF00440 Bacterial regulatory proteins, tetR family JT746_16640 PF13977 BetI-type transcriptional repressor, C-terminal JT746_16645 PF01661 Macro domain JT746_16650 PF06496 Protein of unknown function (DUF1097) JT746_16655 PF02613 Nitrate reductase delta subunit JT746_16660 PF02811 PHP domain JT746_16665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_16675 PF03466 LysR substrate binding domain JT746_16675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_16680 PF02678 Pirin JT746_16680 PF05726 Pirin C-terminal cupin domain JT746_16685 PF00857 Isochorismatase family JT746_16715 PF02562 PhoH-like protein JT746_16720 PF04261 Dyp-type peroxidase family JT746_16725 PF09375 Imelysin JT746_16725 PF13473 Cupredoxin-like domain JT746_16730 PF03239 Iron permease FTR1 family JT746_16735 PF01773 Na+ dependent nucleoside transporter N-terminus JT746_16735 PF07670 Nucleoside recognition JT746_16735 PF07662 Na+ dependent nucleoside transporter C-terminus JT746_16745 PF00474 Sodium:solute symporter family JT746_16750 PF00171 Aldehyde dehydrogenase family JT746_16750 PF01619 Proline dehydrogenase JT746_16750 PF14850 DNA-binding domain of Proline dehydrogenase JT746_16750 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JT746_16760 PF00440 Bacterial regulatory proteins, tetR family JT746_16760 PF08362 YcdC-like protein, C-terminal region JT746_16765 PF00296 Luciferase-like monooxygenase JT746_16770 PF00857 Isochorismatase family JT746_16775 PF01042 Endoribonuclease L-PSP JT746_16780 PF00561 alpha/beta hydrolase fold JT746_16785 PF00881 Nitroreductase family JT746_16790 PF01613 Flavin reductase like domain JT746_16795 PF00860 Permease family JT746_16805 PF10685 Stress-induced bacterial acidophilic repeat motif JT746_16810 PF03358 NADPH-dependent FMN reductase JT746_16815 PF13993 YccJ-like protein JT746_16965 PF05840 Bacteriophage replication gene A protein (GPA) JT746_16970 PF00145 C-5 cytosine-specific DNA methylase JT746_17025 PF02899 Phage integrase, N-terminal SAM-like domain JT746_17025 PF00589 Phage integrase family JT746_17030 PF00328 Histidine phosphatase superfamily (branch 2) JT746_17035 PF01638 HxlR-like helix-turn-helix JT746_17055 PF00324 Amino acid permease JT746_17060 PF00120 Glutamine synthetase, catalytic domain JT746_17065 PF07722 Peptidase C26 JT746_17070 PF07883 Cupin domain JT746_17070 PF01381 Helix-turn-helix JT746_17075 PF00171 Aldehyde dehydrogenase family JT746_17080 PF01266 FAD dependent oxidoreductase JT746_17085 PF03466 LysR substrate binding domain JT746_17085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_17090 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_17095 PF05524 PEP-utilising enzyme, N-terminal JT746_17095 PF00381 PTS HPr component phosphorylation site JT746_17095 PF02896 PEP-utilising enzyme, TIM barrel domain JT746_17095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_17095 PF00391 PEP-utilising enzyme, mobile domain JT746_17105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_17110 PF01228 Glycine radical JT746_17110 PF02901 Pyruvate formate lyase-like JT746_17115 PF04055 Radical SAM superfamily JT746_17120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_17130 PF12833 Helix-turn-helix domain JT746_17135 PF00990 Diguanylate cyclase, GGDEF domain JT746_17140 PF00005 ABC transporter JT746_17145 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17155 PF12792 CSS motif domain associated with EAL JT746_17155 PF00563 EAL domain JT746_17165 PF00343 Carbohydrate phosphorylase JT746_17175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_17180 PF01027 Inhibitor of apoptosis-promoting Bax1 JT746_17185 PF04358 DsrC like protein JT746_17190 PF00708 Acylphosphatase JT746_17195 PF12833 Helix-turn-helix domain JT746_17200 PF01161 Phosphatidylethanolamine-binding protein JT746_17205 PF10672 S-adenosylmethionine-dependent methyltransferase JT746_17205 PF17785 PUA-like domain JT746_17210 PF08755 Hemimethylated DNA-binding protein YccV like JT746_17215 PF13380 CoA binding domain JT746_17220 PF02142 MGS-like domain JT746_17225 PF00580 UvrD/REP helicase N-terminal domain JT746_17225 PF12462 DNA helicase IV / RNA helicase N terminal JT746_17225 PF13361 UvrD-like helicase C-terminal domain JT746_17230 PF03733 Inner membrane component domain JT746_17235 PF12805 FUSC-like inner membrane protein yccS JT746_17240 PF04994 TfoX C-terminal domain JT746_17240 PF04993 TfoX N-terminal domain JT746_17250 PF03846 Cell division inhibitor SulA JT746_17255 PF01389 OmpA-like transmembrane domain JT746_17255 PF00691 OmpA family JT746_17260 PF17414 MatP C-terminal ribbon-helix-helix domain JT746_17260 PF06303 MatP N-terminal domain JT746_17265 PF05362 Lon protease (S16) C-terminal proteolytic domain JT746_17265 PF13654 AAA domain JT746_17270 PF07977 FabA-like domain JT746_17275 PF04957 Ribosome modulation factor JT746_17280 PF03886 ABC-type transport auxiliary lipoprotein component JT746_17285 PF02470 MlaD protein JT746_17290 PF04403 Paraquat-inducible protein A JT746_17295 PF16326 ABC transporter C-terminal domain JT746_17295 PF12848 ABC transporter JT746_17295 PF00005 ABC transporter JT746_17300 PF01170 Putative RNA methylase family UPF0020 JT746_17300 PF02926 THUMP domain JT746_17300 PF10672 S-adenosylmethionine-dependent methyltransferase JT746_17305 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_17305 PF03473 MOSC domain JT746_17305 PF03476 MOSC N-terminal beta barrel domain JT746_17310 PF07126 Cell-division protein ZapC JT746_17315 PF01180 Dihydroorotate dehydrogenase JT746_17320 PF03358 NADPH-dependent FMN reductase JT746_17325 PF09084 NMT1/THI5 like JT746_17330 PF00296 Luciferase-like monooxygenase JT746_17335 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17340 PF00005 ABC transporter JT746_17345 PF01433 Peptidase family M1 domain JT746_17345 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JT746_17345 PF11940 Domain of unknown function (DUF3458) Ig-like fold JT746_17350 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JT746_17350 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JT746_17355 PF00152 tRNA synthetases class II (D, K and N) JT746_17355 PF01336 OB-fold nucleic acid binding domain JT746_17365 PF00155 Aminotransferase class I and II JT746_17370 PF00753 Metallo-beta-lactamase superfamily JT746_17375 PF05951 Bacterial protein of unknown function (DUF882) JT746_17380 PF03734 L,D-transpeptidase catalytic domain JT746_17380 PF01471 Putative peptidoglycan binding domain JT746_17385 PF16330 MukB hinge domain JT746_17385 PF04310 MukB N-terminal JT746_17390 PF04288 MukE-like family JT746_17395 PF17192 MukF middle domain JT746_17395 PF17193 MukF C-terminal domain JT746_17395 PF03882 MukF winged-helix domain JT746_17400 PF13847 Methyltransferase domain JT746_17405 PF02698 DUF218 domain JT746_17410 PF01636 Phosphotransferase enzyme family JT746_17415 PF02348 Cytidylyltransferase JT746_17420 PF03966 Trm112p-like protein JT746_17425 PF06224 Winged helix DNA-binding domain JT746_17430 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JT746_17435 PF00664 ABC transporter transmembrane region JT746_17435 PF00005 ABC transporter JT746_17440 PF00753 Metallo-beta-lactamase superfamily JT746_17440 PF03772 Competence protein JT746_17445 PF00216 Bacterial DNA-binding protein JT746_17450 PF00575 S1 RNA binding domain JT746_17455 PF02224 Cytidylate kinase JT746_17460 PF01435 Peptidase family M48 JT746_17465 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JT746_17470 PF00266 Aminotransferase class-V JT746_17475 PF04239 Protein of unknown function (DUF421) JT746_17480 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding JT746_17480 PF18381 YcaO cyclodehydratase C-terminal domain JT746_17485 PF01226 Formate/nitrite transporter JT746_17490 PF01228 Glycine radical JT746_17490 PF02901 Pyruvate formate lyase-like JT746_17495 PF04055 Radical SAM superfamily JT746_17500 PF07690 Major Facilitator Superfamily JT746_17505 PF04976 DMSO reductase anchor subunit (DmsC) JT746_17510 PF13247 4Fe-4S dicluster domain JT746_17510 PF12800 4Fe-4S binding domain JT746_17520 PF02403 Seryl-tRNA synthetase N-terminal domain JT746_17520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT746_17525 PF12002 MgsA AAA+ ATPase C terminal JT746_17525 PF00004 ATPase family associated with various cellular activities (AAA) JT746_17525 PF16193 AAA C-terminal domain JT746_17530 PF03548 Outer membrane lipoprotein carrier protein LolA JT746_17535 PF17854 FtsK alpha domain JT746_17535 PF09397 Ftsk gamma domain JT746_17535 PF01580 FtsK/SpoIIIE family JT746_17535 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JT746_17540 PF01037 Lrp/AsnC ligand binding domain JT746_17545 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_17550 PF00005 ABC transporter JT746_17550 PF00664 ABC transporter transmembrane region JT746_17555 PF00664 ABC transporter transmembrane region JT746_17555 PF00005 ABC transporter JT746_17560 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JT746_17565 PF01176 Translation initiation factor 1A / IF-1 JT746_17570 PF00004 ATPase family associated with various cellular activities (AAA) JT746_17570 PF02861 Clp amino terminal domain, pathogenicity island component JT746_17570 PF07724 AAA domain (Cdc48 subfamily) JT746_17570 PF10431 C-terminal, D2-small domain, of ClpB protein JT746_17570 PF17871 AAA lid domain JT746_17575 PF02617 ATP-dependent Clp protease adaptor protein ClpS JT746_17580 PF00313 'Cold-shock' DNA-binding domain JT746_17585 PF02687 FtsX-like permease family JT746_17585 PF00005 ABC transporter JT746_17585 PF12704 MacB-like periplasmic core domain JT746_17590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_17595 PF11398 Protein of unknown function (DUF2813) JT746_17600 PF00230 Major intrinsic protein JT746_17605 PF03956 Lysine exporter LysO JT746_17610 PF03063 Prismane/CO dehydrogenase family JT746_17615 PF00970 Oxidoreductase FAD-binding domain JT746_17615 PF00175 Oxidoreductase NAD-binding domain JT746_17615 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_17625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_17625 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_17625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_17630 PF01212 Beta-eliminating lyase JT746_17635 PF11066 Protein of unknown function (DUF2867) JT746_17635 PF13460 NAD(P)H-binding JT746_17640 PF01370 NAD dependent epimerase/dehydratase family JT746_17645 PF01510 N-acetylmuramoyl-L-alanine amidase JT746_17650 PF00360 Phytochrome region JT746_17650 PF00990 Diguanylate cyclase, GGDEF domain JT746_17650 PF00563 EAL domain JT746_17650 PF01590 GAF domain JT746_17660 PF07338 Protein of unknown function (DUF1471) JT746_17665 PF12883 Protein of unknown function (DUF3828) JT746_17670 PF00005 ABC transporter JT746_17675 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_17680 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17685 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17690 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_17695 PF00512 His Kinase A (phospho-acceptor) domain JT746_17695 PF18698 Histidine kinase sensor domain JT746_17695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_17695 PF00672 HAMP domain JT746_17695 PF00989 PAS fold JT746_17700 PF00072 Response regulator receiver domain JT746_17700 PF00486 Transcriptional regulatory protein, C terminal JT746_17705 PF05958 tRNA (Uracil-5-)-methyltransferase JT746_17710 PF10767 Protein of unknown function (DUF2593) JT746_17715 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17720 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17725 PF08402 TOBE domain JT746_17725 PF00005 ABC transporter JT746_17730 PF13416 Bacterial extracellular solute-binding protein JT746_17735 PF10722 Putative bacterial sensory transduction regulator JT746_17740 PF18030 RimK PreATP-grasp domain JT746_17740 PF08443 RimK-like ATP-grasp domain JT746_17745 PF00881 Nitroreductase family JT746_17750 PF07214 Protein of unknown function (DUF1418) JT746_17755 PF00462 Glutaredoxin JT746_17760 PF11045 Putative inner membrane protein of Enterobacteriaceae JT746_17765 PF02080 TrkA-C domain JT746_17765 PF06826 Predicted Permease Membrane Region JT746_17770 PF00440 Bacterial regulatory proteins, tetR family JT746_17775 PF07690 Major Facilitator Superfamily JT746_17785 PF07690 Major Facilitator Superfamily JT746_17790 PF01569 PAP2 superfamily JT746_17795 PF00455 DeoR C terminal sensor domain JT746_17795 PF08220 DeoR-like helix-turn-helix domain JT746_17800 PF00768 D-alanyl-D-alanine carboxypeptidase JT746_17800 PF07943 Penicillin-binding protein 5, C-terminal domain JT746_17805 PF00043 Glutathione S-transferase, C-terminal domain JT746_17805 PF13417 Glutathione S-transferase, N-terminal domain JT746_17810 PF07995 Glucose / Sorbosone dehydrogenase JT746_17815 PF10799 Biofilm formation protein (YliH/bssR) JT746_17820 PF01306 LacY proton/sugar symporter JT746_17825 PF00919 Uncharacterized protein family UPF0004 JT746_17825 PF04055 Radical SAM superfamily JT746_17825 PF18693 TRAM domain JT746_17830 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17830 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_17835 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_17845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_17845 PF00005 ABC transporter JT746_17850 PF01112 Asparaginase JT746_17855 PF03454 MoeA C-terminal region (domain IV) JT746_17855 PF03453 MoeA N-terminal region (domain I and II) JT746_17855 PF00994 Probable molybdopterin binding domain JT746_17860 PF00899 ThiF family JT746_17865 PF04055 Radical SAM superfamily JT746_17870 PF02901 Pyruvate formate lyase-like JT746_17870 PF01228 Glycine radical JT746_17880 PF07350 Protein of unknown function (DUF1479) JT746_17885 PF00356 Bacterial regulatory proteins, lacI family JT746_17890 PF07690 Major Facilitator Superfamily JT746_17895 PF17137 Domain of unknown function (DUF5110) JT746_17895 PF13802 Galactose mutarotase-like JT746_17895 PF16338 Domain of unknown function (DUF4968) JT746_17895 PF01055 Glycosyl hydrolases family 31 JT746_17900 PF00005 ABC transporter JT746_17900 PF12848 ABC transporter JT746_17910 PF17969 L,D-transpeptidase C-terminal domain JT746_17910 PF03734 L,D-transpeptidase catalytic domain JT746_17915 PF00392 Bacterial regulatory proteins, gntR family JT746_17915 PF07702 UTRA domain JT746_17920 PF00232 Glycosyl hydrolase family 1 JT746_17925 PF03600 Citrate transporter JT746_17930 PF01325 Iron dependent repressor, N-terminal DNA binding domain JT746_17930 PF02742 Iron dependent repressor, metal binding and dimerisation domain JT746_17940 PF00884 Sulfatase JT746_17945 PF13505 Outer membrane protein beta-barrel domain JT746_17950 PF00892 EamA-like transporter family JT746_17955 PF00210 Ferritin-like domain JT746_17960 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_17965 PF00528 Binding-protein-dependent transport system inner membrane component JT746_17970 PF00005 ABC transporter JT746_17975 PF00924 Mechanosensitive ion channel JT746_17980 PF05971 RNA methyltransferase JT746_17985 PF01613 Flavin reductase like domain JT746_17995 PF01258 Prokaryotic dksA/traR C4-type zinc finger JT746_18000 PF07338 Protein of unknown function (DUF1471) JT746_18005 PF02885 Glycosyl transferase family, helical bundle domain JT746_18010 PF13307 Helicase C-terminal domain JT746_18010 PF06733 DEAD_2 JT746_18010 PF00270 DEAD/DEAH box helicase JT746_18015 PF00270 DEAD/DEAH box helicase JT746_18015 PF00271 Helicase conserved C-terminal domain JT746_18025 PF00440 Bacterial regulatory proteins, tetR family JT746_18025 PF09209 Tetracyclin repressor-like, C-terminal domain JT746_18030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_18035 PF00005 ABC transporter JT746_18050 PF11076 Putative inner membrane protein YbhQ JT746_18055 PF03372 Endonuclease/Exonuclease/phosphatase family JT746_18060 PF13091 PLD-like domain JT746_18065 PF03706 Lysylphosphatidylglycerol synthase TM region JT746_18070 PF01027 Inhibitor of apoptosis-promoting Bax1 JT746_18075 PF02391 MoaE protein JT746_18080 PF02597 ThiS family JT746_18085 PF01967 MoaC family JT746_18090 PF00994 Probable molybdopterin binding domain JT746_18095 PF04055 Radical SAM superfamily JT746_18095 PF06463 Molybdenum Cofactor Synthesis C JT746_18100 PF01933 Uncharacterised protein family UPF0052 JT746_18105 PF08019 Phosphoethanolamine transferase EptA/EptB JT746_18105 PF00884 Sulfatase JT746_18110 PF00072 Response regulator receiver domain JT746_18110 PF00486 Transcriptional regulatory protein, C terminal JT746_18115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_18115 PF00512 His Kinase A (phospho-acceptor) domain JT746_18120 PF00271 Helicase conserved C-terminal domain JT746_18120 PF04851 Type III restriction enzyme, res subunit JT746_18120 PF02151 UvrB/uvrC motif JT746_18120 PF17757 UvrB interaction domain JT746_18120 PF12344 Ultra-violet resistance protein B JT746_18130 PF00005 ABC transporter JT746_18140 PF08241 Methyltransferase domain JT746_18145 PF00155 Aminotransferase class I and II JT746_18150 PF06968 Biotin and Thiamin Synthesis associated domain JT746_18150 PF04055 Radical SAM superfamily JT746_18155 PF00202 Aminotransferase class-III JT746_18160 PF01161 Phosphatidylethanolamine-binding protein JT746_18165 PF00324 Amino acid permease JT746_18170 PF00221 Aromatic amino acid lyase JT746_18175 PF17391 Urocanase N-terminal domain JT746_18175 PF01175 Urocanase Rossmann-like domain JT746_18175 PF17392 Urocanase C-terminal domain JT746_18185 PF00392 Bacterial regulatory proteins, gntR family JT746_18185 PF07702 UTRA domain JT746_18190 PF00491 Arginase family JT746_18195 PF01979 Amidohydrolase family JT746_18200 PF01095 Pectinesterase JT746_18205 PF00689 Cation transporting ATPase, C-terminus JT746_18205 PF00690 Cation transporter/ATPase, N-terminus JT746_18210 PF00582 Universal stress protein family JT746_18215 PF13533 Biotin-lipoyl like JT746_18220 PF00873 AcrB/AcrD/AcrF family JT746_18245 PF13411 MerR HTH family regulatory protein JT746_18250 PF00563 EAL domain JT746_18250 PF04940 Sensors of blue-light using FAD JT746_18255 PF10798 Biofilm development protein YmgB/AriR JT746_18265 PF10798 Biofilm development protein YmgB/AriR JT746_18270 PF10282 Lactonase, 7-bladed beta-propeller JT746_18280 PF00005 ABC transporter JT746_18280 PF03459 TOBE domain JT746_18285 PF00528 Binding-protein-dependent transport system inner membrane component JT746_18295 PF10766 Multidrug efflux pump-associated protein AcrZ JT746_18300 PF03459 TOBE domain JT746_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18305 PF00005 ABC transporter JT746_18310 PF16363 GDP-mannose 4,6 dehydratase JT746_18315 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JT746_18315 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JT746_18320 PF00288 GHMP kinases N terminal domain JT746_18320 PF08544 GHMP kinases C terminal JT746_18320 PF10509 Galactokinase galactose-binding signature JT746_18325 PF01263 Aldose 1-epimerase JT746_18330 PF00300 Histidine phosphatase superfamily (branch 1) JT746_18335 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT746_18340 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JT746_18345 PF00364 Biotin-requiring enzyme JT746_18345 PF00682 HMGL-like JT746_18345 PF02436 Conserved carboxylase domain JT746_18350 PF04277 Oxaloacetate decarboxylase, gamma chain JT746_18355 PF03600 Citrate transporter JT746_18355 PF02080 TrkA-C domain JT746_18360 PF03466 LysR substrate binding domain JT746_18360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18365 PF03466 LysR substrate binding domain JT746_18365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18370 PF05681 Fumarate hydratase (Fumerase) JT746_18375 PF05681 Fumarate hydratase (Fumerase) JT746_18375 PF05683 Fumarase C-terminus JT746_18380 PF00793 DAHP synthetase I family JT746_18385 PF13985 YbgS-like protein JT746_18390 PF01545 Cation efflux family JT746_18395 PF04973 Nicotinamide mononucleotide transporter JT746_18400 PF02445 Quinolinate synthetase A protein JT746_18450 PF13174 Tetratricopeptide repeat JT746_18450 PF16331 TolA binding protein trimerisation JT746_18455 PF00691 OmpA family JT746_18460 PF04052 TolB amino-terminal domain JT746_18460 PF07676 WD40-like Beta Propeller Repeat JT746_18465 PF06519 TolA C-terminal JT746_18465 PF06519 TolA C-terminal JT746_18470 PF02472 Biopolymer transport protein ExbD/TolR JT746_18475 PF01618 MotA/TolQ/ExbB proton channel family JT746_18480 PF03061 Thioesterase superfamily JT746_18485 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) JT746_18490 PF08173 Membrane bound YbgT-like protein JT746_18495 PF02322 Cytochrome bd terminal oxidase subunit II JT746_18500 PF01654 Cytochrome bd terminal oxidase subunit I JT746_18505 PF02629 CoA binding domain JT746_18505 PF00549 CoA-ligase JT746_18510 PF08442 ATP-grasp domain JT746_18510 PF00549 CoA-ligase JT746_18515 PF00364 Biotin-requiring enzyme JT746_18515 PF02817 e3 binding domain JT746_18515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JT746_18520 PF16078 2-oxoglutarate dehydrogenase N-terminus JT746_18520 PF16870 2-oxoglutarate dehydrogenase C-terminal JT746_18520 PF00676 Dehydrogenase E1 component JT746_18520 PF02779 Transketolase, pyrimidine binding domain JT746_18525 PF13085 2Fe-2S iron-sulfur cluster binding domain JT746_18530 PF02910 Fumarate reductase flavoprotein C-term JT746_18530 PF00890 FAD binding domain JT746_18535 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JT746_18540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JT746_18545 PF00285 Citrate synthase, C-terminal domain JT746_18550 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JT746_18550 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JT746_18550 PF06827 Zinc finger found in FPG and IleRS JT746_18555 PF01470 Pyroglutamyl peptidase JT746_18560 PF03746 LamB/YcsF family JT746_18565 PF02626 Carboxyltransferase domain, subdomain A and B JT746_18570 PF02682 Carboxyltransferase domain, subdomain C and D JT746_18575 PF01784 NIF3 (NGG1p interacting factor 3) JT746_18580 PF00854 POT family JT746_18585 PF03441 FAD binding domain of DNA photolyase JT746_18585 PF00875 DNA photolyase JT746_18590 PF10725 Protein of unknown function (DUF2517) JT746_18595 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) JT746_18600 PF03814 Potassium-transporting ATPase A subunit JT746_18610 PF02669 K+-transporting ATPase, c chain JT746_18615 PF00512 His Kinase A (phospho-acceptor) domain JT746_18615 PF13493 Domain of unknown function (DUF4118) JT746_18615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_18615 PF02702 Osmosensitive K+ channel His kinase sensor domain JT746_18615 PF13492 GAF domain JT746_18620 PF00072 Response regulator receiver domain JT746_18620 PF00486 Transcriptional regulatory protein, C terminal JT746_18630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT746_18630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT746_18630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT746_18630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT746_18635 PF17206 SeqA protein N-terminal domain JT746_18635 PF03925 SeqA protein C-terminal domain JT746_18640 PF12697 Alpha/beta hydrolase family JT746_18645 PF01402 Ribbon-helix-helix protein, copG family JT746_18650 PF00258 Flavodoxin JT746_18655 PF01475 Ferric uptake regulator family JT746_18660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18660 PF03466 LysR substrate binding domain JT746_18665 PF00890 FAD binding domain JT746_18665 PF14537 Cytochrome c3 JT746_18675 PF07690 Major Facilitator Superfamily JT746_18680 PF13982 YbfN-like lipoprotein JT746_18685 PF03573 outer membrane porin, OprD family JT746_18695 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT746_18695 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JT746_18700 PF02378 Phosphotransferase system, EIIC JT746_18700 PF00367 phosphotransferase system, EIIB JT746_18700 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JT746_18705 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JT746_18710 PF01979 Amidohydrolase family JT746_18715 PF00480 ROK family JT746_18715 PF01047 MarR family JT746_18720 PF13344 Haloacid dehalogenase-like hydrolase JT746_18725 PF13537 Glutamine amidotransferase domain JT746_18725 PF00733 Asparagine synthase JT746_18765 PF01494 FAD binding domain JT746_18770 PF00919 Uncharacterized protein family UPF0004 JT746_18770 PF01938 TRAM domain JT746_18770 PF04055 Radical SAM superfamily JT746_18775 PF02562 PhoH-like protein JT746_18780 PF02130 Uncharacterized protein family UPF0054 JT746_18785 PF03471 Transporter associated domain JT746_18785 PF00571 CBS domain JT746_18790 PF00795 Carbon-nitrogen hydrolase JT746_18795 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_18800 PF00528 Binding-protein-dependent transport system inner membrane component JT746_18805 PF00528 Binding-protein-dependent transport system inner membrane component JT746_18810 PF00005 ABC transporter JT746_18815 PF08479 POTRA domain, ShlB-type JT746_18815 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB JT746_18815 PF17287 POTRA domain JT746_18820 PF05860 haemagglutination activity domain JT746_18820 PF13018 Extended Signal Peptide of Type V secretion system JT746_18820 PF13332 Hemagglutinin repeat JT746_18820 PF04829 Pre-toxin domain with VENN motif JT746_18825 PF07295 Zinc-ribbon containing domain JT746_18830 PF08264 Anticodon-binding domain of tRNA JT746_18830 PF00133 tRNA synthetases class I (I, L, M and V) JT746_18830 PF13603 Leucyl-tRNA synthetase, Domain 2 JT746_18835 PF04390 Lipopolysaccharide-assembly JT746_18840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JT746_18840 PF06144 DNA polymerase III, delta subunit JT746_18845 PF01467 Cytidylyltransferase-like JT746_18850 PF00300 Histidine phosphatase superfamily (branch 1) JT746_18860 PF02590 Predicted SPOUT methyltransferase JT746_18865 PF00905 Penicillin binding protein transpeptidase domain JT746_18865 PF03717 Penicillin-binding Protein dimerisation domain JT746_18870 PF01098 Cell cycle protein JT746_18875 PF03330 Lytic transglycolase JT746_18875 PF05036 Sporulation related domain JT746_18880 PF07943 Penicillin-binding protein 5, C-terminal domain JT746_18880 PF00768 D-alanyl-D-alanine carboxypeptidase JT746_18885 PF04359 Protein of unknown function (DUF493) JT746_18890 PF03099 Biotin/lipoate A/B protein ligase family JT746_18895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18895 PF03466 LysR substrate binding domain JT746_18900 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JT746_18900 PF04055 Radical SAM superfamily JT746_18905 PF02416 mttA/Hcf106 family JT746_18910 PF00795 Carbon-nitrogen hydrolase JT746_18915 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JT746_18920 PF00313 'Cold-shock' DNA-binding domain JT746_18925 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP JT746_18930 PF03606 C4-dicarboxylate anaerobic carrier JT746_18935 PF00445 Ribonuclease T2 family JT746_18940 PF01272 Transcription elongation factor, GreA/GreB, C-term JT746_18940 PF14760 Rnk N-terminus JT746_18945 PF00582 Universal stress protein family JT746_18950 PF13192 Thioredoxin domain JT746_18950 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_18955 PF10417 C-terminal domain of 1-Cys peroxiredoxin JT746_18955 PF00578 AhpC/TSA family JT746_18960 PF13098 Thioredoxin-like domain JT746_18965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_18965 PF03466 LysR substrate binding domain JT746_18970 PF01507 Phosphoadenosine phosphosulfate reductase family JT746_18970 PF11922 Domain of unknown function (DUF3440) JT746_18975 PF02195 ParB-like nuclease domain JT746_18980 PF00155 Aminotransferase class I and II JT746_18990 PF03079 ARD/ARD' family JT746_18995 PF01568 Molydopterin dinucleotide binding domain JT746_18995 PF00384 Molybdopterin oxidoreductase JT746_19005 PF00005 ABC transporter JT746_19010 PF02653 Branched-chain amino acid transport system / permease component JT746_19015 PF02653 Branched-chain amino acid transport system / permease component JT746_19025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_19025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_19030 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_19030 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_19035 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_19040 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JT746_19050 PF07969 Amidohydrolase family JT746_19055 PF00356 Bacterial regulatory proteins, lacI family JT746_19060 PF00459 Inositol monophosphatase family JT746_19065 PF07690 Major Facilitator Superfamily JT746_19070 PF00328 Histidine phosphatase superfamily (branch 2) JT746_19075 PF01008 Initiation factor 2 subunit family JT746_19080 PF01636 Phosphotransferase enzyme family JT746_19095 PF02653 Branched-chain amino acid transport system / permease component JT746_19100 PF00005 ABC transporter JT746_19105 PF00465 Iron-containing alcohol dehydrogenase JT746_19120 PF04328 Selenoprotein, putative JT746_19125 PF02554 Carbon starvation protein CstA JT746_19125 PF13722 5TM C-terminal transporter carbon starvation CstA JT746_19130 PF03061 Thioesterase superfamily JT746_19140 PF00857 Isochorismatase family JT746_19140 PF00550 Phosphopantetheine attachment site JT746_19145 PF00501 AMP-binding enzyme JT746_19145 PF13193 AMP-binding enzyme C-terminal domain JT746_19150 PF00425 chorismate binding enzyme JT746_19155 PF01497 Periplasmic binding protein JT746_19160 PF05977 Transmembrane secretion effector JT746_19165 PF01032 FecCD transport family JT746_19170 PF01032 FecCD transport family JT746_19175 PF00005 ABC transporter JT746_19180 PF00501 AMP-binding enzyme JT746_19180 PF13193 AMP-binding enzyme C-terminal domain JT746_19180 PF00975 Thioesterase domain JT746_19180 PF00550 Phosphopantetheine attachment site JT746_19180 PF00668 Condensation domain JT746_19185 PF03621 MbtH-like protein JT746_19190 PF00756 Putative esterase JT746_19190 PF11806 Domain of unknown function (DUF3327) JT746_19195 PF07715 TonB-dependent Receptor Plug Domain JT746_19195 PF00593 TonB dependent receptor JT746_19200 PF17837 4'-phosphopantetheinyl transferase N-terminal domain JT746_19200 PF01648 4'-phosphopantetheinyl transferase superfamily JT746_19205 PF02779 Transketolase, pyrimidine binding domain JT746_19205 PF02780 Transketolase, C-terminal domain JT746_19210 PF00456 Transketolase, thiamine diphosphate binding domain JT746_19215 PF00325 Bacterial regulatory proteins, crp family JT746_19215 PF04198 Putative sugar-binding domain JT746_19220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_19220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_19225 PF13407 Periplasmic binding protein domain JT746_19235 PF00005 ABC transporter JT746_19240 PF02653 Branched-chain amino acid transport system / permease component JT746_19260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_19260 PF03466 LysR substrate binding domain JT746_19265 PF00924 Mechanosensitive ion channel JT746_19275 PF02028 BCCT, betaine/carnitine/choline family transporter JT746_19280 PF00440 Bacterial regulatory proteins, tetR family JT746_19280 PF13977 BetI-type transcriptional repressor, C-terminal JT746_19285 PF00171 Aldehyde dehydrogenase family JT746_19290 PF00732 GMC oxidoreductase JT746_19290 PF05199 GMC oxidoreductase JT746_19300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_19305 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19310 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19310 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_19315 PF00005 ABC transporter JT746_19315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_19320 PF00005 ABC transporter JT746_19320 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_19325 PF00202 Aminotransferase class-III JT746_19330 PF00106 short chain dehydrogenase JT746_19335 PF00005 ABC transporter JT746_19340 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19345 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19350 PF01464 Transglycosylase SLT domain JT746_19350 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_19355 PF00392 Bacterial regulatory proteins, gntR family JT746_19355 PF00155 Aminotransferase class I and II JT746_19360 PF00155 Aminotransferase class I and II JT746_19365 PF00892 EamA-like transporter family JT746_19370 PF07687 Peptidase dimerisation domain JT746_19370 PF01546 Peptidase family M20/M25/M40 JT746_19375 PF00005 ABC transporter JT746_19375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_19380 PF00005 ABC transporter JT746_19380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JT746_19385 PF12911 N-terminal TM domain of oligopeptide transport permease C JT746_19385 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19390 PF00528 Binding-protein-dependent transport system inner membrane component JT746_19400 PF04107 Glutamate-cysteine ligase family 2(GCS2) JT746_19405 PF09992 Phosphodiester glycosidase JT746_19410 PF00873 AcrB/AcrD/AcrF family JT746_19415 PF13533 Biotin-lipoyl like JT746_19420 PF00689 Cation transporting ATPase, C-terminus JT746_19420 PF00690 Cation transporter/ATPase, N-terminus JT746_19425 PF06643 Protein of unknown function (DUF1158) JT746_19430 PF12833 Helix-turn-helix domain JT746_19435 PF12706 Beta-lactamase superfamily domain JT746_19440 PF00440 Bacterial regulatory proteins, tetR family JT746_19445 PF04237 YjbR JT746_19450 PF00881 Nitroreductase family JT746_19475 PF07690 Major Facilitator Superfamily JT746_19480 PF00924 Mechanosensitive ion channel JT746_19485 PF00356 Bacterial regulatory proteins, lacI family JT746_19495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_19495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_19505 PF03825 Nucleoside H+ symporter JT746_19510 PF00324 Amino acid permease JT746_19515 PF00171 Aldehyde dehydrogenase family JT746_19520 PF01266 FAD dependent oxidoreductase JT746_19530 PF13520 Amino acid permease JT746_19540 PF00850 Histone deacetylase domain JT746_19550 PF00196 Bacterial regulatory proteins, luxR family JT746_19555 PF04055 Radical SAM superfamily JT746_19560 PF00884 Sulfatase JT746_19570 PF17409 MoaF C-terminal domain JT746_19570 PF10703 MoaF N-terminal domain JT746_19575 PF00248 Aldo/keto reductase family JT746_19580 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_19585 PF07687 Peptidase dimerisation domain JT746_19585 PF01546 Peptidase family M20/M25/M40 JT746_19610 PF01032 FecCD transport family JT746_19615 PF00005 ABC transporter JT746_19620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_19620 PF00529 HlyD membrane-fusion protein of T1SS JT746_19625 PF11742 Protein of unknown function (DUF3302) JT746_19635 PF00294 pfkB family carbohydrate kinase JT746_19640 PF02264 LamB porin JT746_19640 PF11471 Maltoporin periplasmic N-terminal extension JT746_19645 PF00367 phosphotransferase system, EIIB JT746_19645 PF02378 Phosphotransferase system, EIIC JT746_19650 PF08244 Glycosyl hydrolases family 32 C terminal JT746_19650 PF00251 Glycosyl hydrolases family 32 N-terminal domain JT746_19655 PF00356 Bacterial regulatory proteins, lacI family JT746_19655 PF13407 Periplasmic binding protein domain JT746_19665 PF02653 Branched-chain amino acid transport system / permease component JT746_19670 PF00005 ABC transporter JT746_19675 PF13407 Periplasmic binding protein domain JT746_19680 PF00356 Bacterial regulatory proteins, lacI family JT746_19685 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_19685 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_19690 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_19690 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_19695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_19695 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_19700 PF01261 Xylose isomerase-like TIM barrel JT746_19710 PF00152 tRNA synthetases class II (D, K and N) JT746_19710 PF01336 OB-fold nucleic acid binding domain JT746_19715 PF00854 POT family JT746_19720 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT746_19720 PF01276 Orn/Lys/Arg decarboxylase, major domain JT746_19720 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT746_19725 PF13520 Amino acid permease JT746_19730 PF00486 Transcriptional regulatory protein, C terminal JT746_19730 PF18500 CadC C-terminal domain 1 JT746_19740 PF03279 Bacterial lipid A biosynthesis acyltransferase JT746_19755 PF00577 Outer membrane usher protein JT746_19755 PF13953 PapC C-terminal domain JT746_19755 PF13954 PapC N-terminal domain JT746_19760 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_19760 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_19765 PF16970 Type-1 fimbrial protein, A JT746_19780 PF00285 Citrate synthase, C-terminal domain JT746_19795 PF00576 HIUase/Transthyretin family JT746_19810 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JT746_19810 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JT746_19820 PF09190 DALR domain JT746_19820 PF01406 tRNA synthetases class I (C) catalytic domain JT746_19825 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JT746_19830 PF00149 Calcineurin-like phosphoesterase JT746_19840 PF00731 AIR carboxylase JT746_19845 PF02222 ATP-grasp domain JT746_19845 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JT746_19855 PF00267 Gram-negative porin JT746_19870 PF00005 ABC transporter JT746_19875 PF13472 GDSL-like Lipase/Acylhydrolase family JT746_19880 PF00106 short chain dehydrogenase JT746_19885 PF00085 Thioredoxin JT746_19890 PF03649 Uncharacterised protein family (UPF0014) JT746_19895 PF00005 ABC transporter JT746_19900 PF16200 C-terminal region of band_7 JT746_19900 PF01145 SPFH domain / Band 7 family JT746_19905 PF01957 NfeD-like C-terminal, partner-binding JT746_19910 PF13411 MerR HTH family regulatory protein JT746_19915 PF00403 Heavy-metal-associated domain JT746_19920 PF01963 TraB family JT746_19925 PF04073 Aminoacyl-tRNA editing domain JT746_19930 PF00149 Calcineurin-like phosphoesterase JT746_19930 PF02872 5'-nucleotidase, C-terminal domain JT746_19935 PF07690 Major Facilitator Superfamily JT746_19940 PF02254 TrkA-N domain JT746_19940 PF00999 Sodium/hydrogen exchanger family JT746_19945 PF00294 pfkB family carbohydrate kinase JT746_19950 PF00762 Ferrochelatase JT746_19955 PF05191 Adenylate kinase, active site lid JT746_19960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_19960 PF00183 Hsp90 protein JT746_19965 PF02132 RecR protein JT746_19965 PF13662 Toprim domain JT746_19970 PF02575 YbaB/EbfC DNA-binding family JT746_19975 PF12169 DNA polymerase III subunits gamma and tau domain III JT746_19975 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JT746_19975 PF12170 DNA polymerase III tau subunit V interacting with alpha JT746_19980 PF00156 Phosphoribosyl transferase domain JT746_19985 PF04304 Protein of unknown function (DUF454) JT746_19990 PF07445 Primosomal replication protein priC JT746_19995 PF10689 Protein of unknown function (DUF2496) JT746_20000 PF04754 Putative transposase, YhgA-like JT746_20005 PF12794 Mechanosensitive ion channel inner membrane domain 1 JT746_20005 PF12795 Mechanosensitive ion channel porin domain JT746_20005 PF00924 Mechanosensitive ion channel JT746_20010 PF00440 Bacterial regulatory proteins, tetR family JT746_20010 PF08361 MAATS-type transcriptional repressor, C-terminal region JT746_20015 PF00529 HlyD membrane-fusion protein of T1SS JT746_20015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_20020 PF00873 AcrB/AcrD/AcrF family JT746_20025 PF10757 Biofilm formation regulator YbaJ JT746_20030 PF05321 Haemolysin expression modulating protein JT746_20035 PF14602 Hexapeptide repeat of succinyl-transferase JT746_20035 PF12464 Maltose acetyltransferase JT746_20045 PF10777 Inner membrane protein YlaC JT746_20050 PF00392 Bacterial regulatory proteins, gntR family JT746_20050 PF00155 Aminotransferase class I and II JT746_20060 PF00444 Ribosomal protein L36 JT746_20065 PF01197 Ribosomal protein L31 JT746_20070 PF00356 Bacterial regulatory proteins, lacI family JT746_20075 PF02264 LamB porin JT746_20080 PF00367 phosphotransferase system, EIIB JT746_20080 PF02378 Phosphotransferase system, EIIC JT746_20085 PF08532 Beta-galactosidase trimerisation domain JT746_20085 PF08533 Beta-galactosidase C-terminal domain JT746_20085 PF02449 Beta-galactosidase JT746_20090 PF07745 Glycosyl hydrolase family 53 JT746_20095 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20100 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20105 PF13416 Bacterial extracellular solute-binding protein JT746_20110 PF17912 MalK OB fold domain JT746_20110 PF00005 ABC transporter JT746_20115 PF00563 EAL domain JT746_20115 PF12792 CSS motif domain associated with EAL JT746_20120 PF02583 Metal-sensitive transcriptional repressor JT746_20125 PF03824 High-affinity nickel-transport protein JT746_20160 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JT746_20165 PF09619 Type III secretion system lipoprotein chaperone (YscW) JT746_20175 PF00909 Ammonium Transporter Family JT746_20180 PF00543 Nitrogen regulatory protein P-II JT746_20185 PF00664 ABC transporter transmembrane region JT746_20185 PF00005 ABC transporter JT746_20190 PF00664 ABC transporter transmembrane region JT746_20190 PF00005 ABC transporter JT746_20195 PF13404 AsnC-type helix-turn-helix domain JT746_20195 PF01037 Lrp/AsnC ligand binding domain JT746_20210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_20210 PF12793 Sugar transport-related sRNA regulator N-term JT746_20215 PF06508 Queuosine biosynthesis protein QueC JT746_20230 PF13145 PPIC-type PPIASE domain JT746_20235 PF00216 Bacterial DNA-binding protein JT746_20240 PF00004 ATPase family associated with various cellular activities (AAA) JT746_20240 PF05362 Lon protease (S16) C-terminal proteolytic domain JT746_20240 PF02190 ATP-dependent protease La (LON) substrate-binding domain JT746_20245 PF06689 ClpX C4-type zinc finger JT746_20245 PF07724 AAA domain (Cdc48 subfamily) JT746_20245 PF10431 C-terminal, D2-small domain, of ClpB protein JT746_20250 PF00574 Clp protease JT746_20255 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT746_20255 PF05698 Bacterial trigger factor protein (TF) C-terminus JT746_20255 PF05697 Bacterial trigger factor protein (TF) JT746_20260 PF01722 BolA-like protein JT746_20265 PF03923 Uncharacterized lipoprotein JT746_20265 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JT746_20270 PF07690 Major Facilitator Superfamily JT746_20275 PF06481 COX Aromatic Rich Motif JT746_20275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JT746_20280 PF00115 Cytochrome C and Quinol oxidase polypeptide I JT746_20285 PF00510 Cytochrome c oxidase subunit III JT746_20290 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JT746_20295 PF01040 UbiA prenyltransferase family JT746_20305 PF01614 Bacterial transcriptional regulator JT746_20305 PF09339 IclR helix-turn-helix domain JT746_20310 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT746_20310 PF01488 Shikimate / quinate 5-dehydrogenase JT746_20310 PF08501 Shikimate dehydrogenase substrate binding domain JT746_20315 PF00890 FAD binding domain JT746_20325 PF00890 FAD binding domain JT746_20335 PF07690 Major Facilitator Superfamily JT746_20340 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_20340 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_20345 PF07690 Major Facilitator Superfamily JT746_20350 PF04461 Protein of unknown function (DUF520) JT746_20355 PF02558 Ketopantoate reductase PanE/ApbA JT746_20355 PF08546 Ketopantoate reductase PanE/ApbA C terminal JT746_20360 PF01965 DJ-1/PfpI family JT746_20370 PF02926 THUMP domain JT746_20370 PF02568 Thiamine biosynthesis protein (ThiI) JT746_20375 PF02609 Exonuclease VII small subunit JT746_20380 PF00348 Polyprenyl synthetase JT746_20385 PF02780 Transketolase, C-terminal domain JT746_20385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JT746_20385 PF02779 Transketolase, pyrimidine binding domain JT746_20390 PF00248 Aldo/keto reductase family JT746_20395 PF04608 Phosphatidylglycerophosphatase A JT746_20400 PF02769 AIR synthase related protein, C-terminal domain JT746_20400 PF00586 AIR synthase related protein, N-terminal domain JT746_20405 PF01029 NusB family JT746_20410 PF00885 6,7-dimethyl-8-ribityllumazine synthase JT746_20415 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JT746_20415 PF01872 RibD C-terminal domain JT746_20420 PF03477 ATP cone domain JT746_20425 PF11622 Protein of unknown function (DUF3251) JT746_20430 PF03502 Nucleoside-specific channel-forming protein, Tsx JT746_20445 PF02355 Protein export membrane protein JT746_20445 PF07549 SecD/SecF GG Motif JT746_20450 PF07549 SecD/SecF GG Motif JT746_20450 PF02355 Protein export membrane protein JT746_20450 PF13721 SecD export protein N-terminal TM region JT746_20455 PF02699 Preprotein translocase subunit JT746_20460 PF01702 Queuine tRNA-ribosyltransferase JT746_20465 PF02547 Queuosine biosynthesis protein JT746_20475 PF04336 Acyl carrier protein phosphodiesterase JT746_20480 PF00578 AhpC/TSA family JT746_20480 PF10417 C-terminal domain of 1-Cys peroxiredoxin JT746_20490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_20500 PF03611 PTS system sugar-specific permease component JT746_20505 PF00294 pfkB family carbohydrate kinase JT746_20510 PF01116 Fructose-bisphosphate aldolase class-II JT746_20515 PF01979 Amidohydrolase family JT746_20525 PF00857 Isochorismatase family JT746_20530 PF03466 LysR substrate binding domain JT746_20530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_20535 PF02903 Alpha amylase, N-terminal ig-like domain JT746_20535 PF00128 Alpha amylase, catalytic domain JT746_20540 PF00324 Amino acid permease JT746_20545 PF05525 Branched-chain amino acid transport protein JT746_20550 PF00512 His Kinase A (phospho-acceptor) domain JT746_20550 PF00989 PAS fold JT746_20550 PF11808 Phosphate regulon sensor protein PhoR JT746_20550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_20555 PF00486 Transcriptional regulatory protein, C terminal JT746_20555 PF00072 Response regulator receiver domain JT746_20560 PF00149 Calcineurin-like phosphoesterase JT746_20560 PF12320 Type 5 capsule protein repressor C-terminal domain JT746_20565 PF13476 AAA domain JT746_20570 PF00480 ROK family JT746_20575 PF04381 Putative exonuclease, RdgC JT746_20580 PF06865 Pyrimidine/purine nucleoside phosphorylase JT746_20585 PF07302 AroM protein JT746_20590 PF16362 YaiA protein JT746_20595 PF01202 Shikimate kinase JT746_20600 PF09849 Uncharacterized protein conserved in bacteria (DUF2076) JT746_20605 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JT746_20610 PF03807 NADP oxidoreductase coenzyme F420-dependent JT746_20610 PF14748 Pyrroline-5-carboxylate reductase dimerisation JT746_20615 PF07769 psiF repeat JT746_20620 PF00245 Alkaline phosphatase JT746_20625 PF10796 Sigma-S stabilisation anti-adaptor protein JT746_20630 PF07690 Major Facilitator Superfamily JT746_20640 PF07478 D-ala D-ala ligase C-terminus JT746_20640 PF01820 D-ala D-ala ligase N-terminus JT746_20645 PF10953 Protein of unknown function (DUF2754) JT746_20650 PF10954 Protein of unknown function (DUF2755) JT746_20655 PF07759 Protein of unknown function (DUF1615) JT746_20660 PF05992 SbmA/BacA-like family JT746_20665 PF00857 Isochorismatase family JT746_20670 PF00144 Beta-lactamase JT746_20675 PF00490 Delta-aminolevulinic acid dehydratase JT746_20690 PF02668 Taurine catabolism dioxygenase TauD, TfdA family JT746_20695 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20700 PF00005 ABC transporter JT746_20705 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JT746_20710 PF02574 Homocysteine S-methyltransferase JT746_20715 PF00324 Amino acid permease JT746_20725 PF13520 Amino acid permease JT746_20730 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JT746_20735 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JT746_20745 PF13458 Periplasmic binding protein JT746_20750 PF02653 Branched-chain amino acid transport system / permease component JT746_20755 PF02653 Branched-chain amino acid transport system / permease component JT746_20755 PF11862 Domain of unknown function (DUF3382) JT746_20760 PF00005 ABC transporter JT746_20760 PF12399 Branched-chain amino acid ATP-binding cassette transporter JT746_20765 PF00005 ABC transporter JT746_20775 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_20780 PF00005 ABC transporter JT746_20785 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20790 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20805 PF15976 CS1-pili formation C-terminal JT746_20805 PF16967 E-set like domain JT746_20810 PF18649 EcpB C-terminal domain JT746_20815 PF16449 Fimbrillin MatB JT746_20820 PF00196 Bacterial regulatory proteins, luxR family JT746_20825 PF00005 ABC transporter JT746_20835 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20840 PF00528 Binding-protein-dependent transport system inner membrane component JT746_20855 PF00877 NlpC/P60 family JT746_20860 PF00267 Gram-negative porin JT746_20865 PF00696 Amino acid kinase family JT746_20865 PF01472 PUA domain JT746_20870 PF00171 Aldehyde dehydrogenase family JT746_20930 PF03050 Transposase IS66 family JT746_20930 PF13817 IS66 C-terminal element JT746_20930 PF13005 zinc-finger binding domain of transposase IS66 JT746_20930 PF13007 Transposase C of IS166 homeodomain JT746_20935 PF05717 IS66 Orf2 like protein JT746_20980 PF10411 Disulfide bond isomerase protein N-terminus JT746_20980 PF13098 Thioredoxin-like domain JT746_21030 PF13356 Arm DNA-binding domain JT746_21030 PF00589 Phage integrase family JT746_21045 PF02796 Helix-turn-helix domain of resolvase JT746_21045 PF00239 Resolvase, N terminal domain JT746_21075 PF13191 AAA ATPase domain JT746_21075 PF00069 Protein kinase domain JT746_21080 PF00676 Dehydrogenase E1 component JT746_21085 PF02780 Transketolase, C-terminal domain JT746_21085 PF02779 Transketolase, pyrimidine binding domain JT746_21090 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JT746_21090 PF00364 Biotin-requiring enzyme JT746_21090 PF02817 e3 binding domain JT746_21095 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_21095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT746_21105 PF01791 DeoC/LacD family aldolase JT746_21115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_21115 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_21125 PF01842 ACT domain JT746_21125 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JT746_21125 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JT746_21130 PF03611 PTS system sugar-specific permease component JT746_21135 PF13417 Glutathione S-transferase, N-terminal domain JT746_21135 PF00043 Glutathione S-transferase, C-terminal domain JT746_21140 PF13847 Methyltransferase domain JT746_21145 PF09857 Putative toxin of bacterial toxin-antitoxin pair JT746_21150 PF08943 CsiD JT746_21155 PF01266 FAD dependent oxidoreductase JT746_21160 PF00171 Aldehyde dehydrogenase family JT746_21165 PF00202 Aminotransferase class-III JT746_21170 PF00324 Amino acid permease JT746_21175 PF00392 Bacterial regulatory proteins, gntR family JT746_21175 PF07729 FCD domain JT746_21180 PF07417 Sigma factor-binding transcriptional regulator Crl JT746_21185 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JT746_21190 PF00156 Phosphoribosyl transferase domain JT746_21195 PF07687 Peptidase dimerisation domain JT746_21195 PF01546 Peptidase family M20/M25/M40 JT746_21200 PF13673 Acetyltransferase (GNAT) domain JT746_21205 PF11799 impB/mucB/samB family C-terminal domain JT746_21205 PF11798 IMS family HHH motif JT746_21205 PF00817 impB/mucB/samB family JT746_21210 PF03009 Glycerophosphoryl diester phosphodiesterase family JT746_21215 PF04400 (Na+)-NQR maturation NqrM JT746_21220 PF00111 2Fe-2S iron-sulfur cluster binding domain JT746_21220 PF00175 Oxidoreductase NAD-binding domain JT746_21220 PF00970 Oxidoreductase FAD-binding domain JT746_21225 PF02508 Rnf-Nqr subunit, membrane protein JT746_21230 PF02508 Rnf-Nqr subunit, membrane protein JT746_21235 PF04205 FMN-binding domain JT746_21240 PF03116 NQR2, RnfD, RnfE family JT746_21245 PF11973 NQRA C-terminal domain JT746_21245 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JT746_21250 PF03734 L,D-transpeptidase catalytic domain JT746_21255 PF13230 Glutamine amidotransferases class-II JT746_21260 PF13580 SIS domain JT746_21265 PF09317 Domain of unknown function (DUF1974) JT746_21265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JT746_21265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JT746_21265 PF02770 Acyl-CoA dehydrogenase, middle domain JT746_21270 PF00795 Carbon-nitrogen hydrolase JT746_21280 PF01810 LysE type translocator JT746_21285 PF03466 LysR substrate binding domain JT746_21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_21295 PF00929 Exonuclease JT746_21300 PF00075 RNase H JT746_21305 PF08241 Methyltransferase domain JT746_21310 PF00753 Metallo-beta-lactamase superfamily JT746_21310 PF16123 Hydroxyacylglutathione hydrolase C-terminus JT746_21315 PF01476 LysM domain JT746_21315 PF01464 Transglycosylase SLT domain JT746_21320 PF08241 Methyltransferase domain JT746_21325 PF03372 Endonuclease/Exonuclease/phosphatase family JT746_21330 PF07690 Major Facilitator Superfamily JT746_21335 PF03466 LysR substrate binding domain JT746_21335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_21340 PF00248 Aldo/keto reductase family JT746_21380 PF00005 ABC transporter JT746_21380 PF09383 NIL domain JT746_21385 PF00528 Binding-protein-dependent transport system inner membrane component JT746_21390 PF03180 NLPA lipoprotein JT746_21395 PF16358 RcsF lipoprotein JT746_21400 PF01980 tRNA-methyltransferase O JT746_21400 PF18389 TrmO C-terminal domain JT746_21405 PF03129 Anticodon binding domain JT746_21405 PF04073 Aminoacyl-tRNA editing domain JT746_21405 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JT746_21410 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family JT746_21415 PF04170 NlpE N-terminal domain JT746_21415 PF17185 NlpE C-terminal OB domain JT746_21420 PF00472 RF-1 domain JT746_21425 PF07152 YaeQ protein JT746_21430 PF06786 Uncharacterised protein family (UPF0253) JT746_21435 PF07073 Modulator of Rho-dependent transcription termination (ROF) JT746_21440 PF01171 PP-loop family JT746_21440 PF09179 TilS substrate binding domain JT746_21440 PF11734 TilS substrate C-terminal domain JT746_21445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT746_21450 PF01276 Orn/Lys/Arg decarboxylase, major domain JT746_21450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JT746_21450 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JT746_21455 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JT746_21460 PF02811 PHP domain JT746_21460 PF14579 Helix-hairpin-helix motif JT746_21460 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JT746_21460 PF01336 OB-fold nucleic acid binding domain JT746_21460 PF07733 Bacterial DNA polymerase III alpha NTPase domain JT746_21465 PF01351 Ribonuclease HII JT746_21470 PF02684 Lipid-A-disaccharide synthetase JT746_21475 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JT746_21475 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_21480 PF07977 FabA-like domain JT746_21485 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_21485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JT746_21490 PF03938 Outer membrane protein (OmpH-like) JT746_21495 PF01103 Surface antigen JT746_21495 PF07244 Surface antigen variable number repeat JT746_21500 PF02163 Peptidase family M50 JT746_21500 PF17820 PDZ domain JT746_21510 PF01255 Putative undecaprenyl diphosphate synthase JT746_21515 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JT746_21515 PF13288 DXP reductoisomerase C-terminal domain JT746_21515 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JT746_21520 PF01765 Ribosome recycling factor JT746_21525 PF00696 Amino acid kinase family JT746_21530 PF00889 Elongation factor TS JT746_21535 PF00318 Ribosomal protein S2 JT746_21540 PF00557 Metallopeptidase family M24 JT746_21545 PF01909 Nucleotidyltransferase domain JT746_21545 PF01966 HD domain JT746_21545 PF08335 GlnD PII-uridylyltransferase JT746_21545 PF01842 ACT domain JT746_21550 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_21550 PF14602 Hexapeptide repeat of succinyl-transferase JT746_21550 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal JT746_21555 PF11944 Protein of unknown function (DUF3461) JT746_21560 PF17853 GGDEF-like domain JT746_21560 PF05651 Putative sugar diacid recognition JT746_21560 PF13556 PucR C-terminal helix-turn-helix domain JT746_21565 PF00595 PDZ domain JT746_21570 PF13286 Phosphohydrolase-associated domain JT746_21570 PF01966 HD domain JT746_21575 PF01048 Phosphorylase superfamily JT746_21580 PF01497 Periplasmic binding protein JT746_21585 PF03458 UPF0126 domain JT746_21590 PF01521 Iron-sulphur cluster biosynthesis JT746_21595 PF00654 Voltage gated chloride channel JT746_21600 PF00202 Aminotransferase class-III JT746_21605 PF01032 FecCD transport family JT746_21610 PF01497 Periplasmic binding protein JT746_21615 PF00005 ABC transporter JT746_21620 PF00593 TonB dependent receptor JT746_21620 PF07715 TonB-dependent Receptor Plug Domain JT746_21625 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal JT746_21625 PF00905 Penicillin binding protein transpeptidase domain JT746_21625 PF14814 Bifunctional transglycosylase second domain JT746_21625 PF00912 Transglycosylase JT746_21635 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JT746_21640 PF16537 Type II secretion system protein B JT746_21645 PF18494 Pullulanase Ins domain JT746_21645 PF03714 Bacterial pullanase-associated domain JT746_21645 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT746_21645 PF17967 Pullulanase N2 domain JT746_21645 PF11852 Domain of unknown function (DUF3372) JT746_21655 PF11356 Type II secretion system protein C JT746_21660 PF03958 Bacterial type II/III secretion system short domain JT746_21660 PF00263 Bacterial type II and III secretion system protein JT746_21665 PF00437 Type II/IV secretion system protein JT746_21670 PF00482 Type II secretion system (T2SS), protein F JT746_21675 PF08334 Type II secretion system (T2SS), protein G JT746_21675 PF07963 Prokaryotic N-terminal methylation motif JT746_21680 PF07963 Prokaryotic N-terminal methylation motif JT746_21685 PF02501 Type II secretion system (T2SS), protein I JT746_21685 PF07963 Prokaryotic N-terminal methylation motif JT746_21690 PF07963 Prokaryotic N-terminal methylation motif JT746_21690 PF11612 Type II secretion system (T2SS), protein J JT746_21695 PF03934 Type II secretion system (T2SS), protein K JT746_21700 PF12693 GspL periplasmic domain JT746_21700 PF05134 Type II secretion system (T2SS), protein L JT746_21705 PF04612 Type II secretion system (T2SS), protein M JT746_21710 PF01203 Type II secretion system (T2SS), protein N JT746_21715 PF01478 Type IV leader peptidase family JT746_21715 PF06750 Bacterial Peptidase A24 N-terminal domain JT746_21720 PF00270 DEAD/DEAH box helicase JT746_21720 PF04408 Helicase associated domain (HA2) JT746_21720 PF00271 Helicase conserved C-terminal domain JT746_21720 PF08482 ATP-dependent helicase C-terminal JT746_21725 PF02834 LigT like Phosphoesterase JT746_21730 PF17746 SfsA N-terminal OB domain JT746_21730 PF03749 Sugar fermentation stimulation protein RE domain JT746_21735 PF01258 Prokaryotic dksA/traR C4-type zinc finger JT746_21740 PF00749 tRNA synthetases class I (E and Q), catalytic domain JT746_21745 PF12627 Probable RNA and SrmB- binding site of polymerase A JT746_21745 PF01743 Poly A polymerase head domain JT746_21745 PF12626 Polymerase A arginine-rich C-terminus JT746_21750 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JT746_21755 PF02548 Ketopantoate hydroxymethyltransferase JT746_21760 PF02569 Pantoate-beta-alanine ligase JT746_21765 PF02261 Aspartate decarboxylase JT746_21770 PF01522 Polysaccharide deacetylase JT746_21775 PF03610 PTS system fructose IIA component JT746_21780 PF01061 ABC-2 type transporter JT746_21785 PF00005 ABC transporter JT746_21790 PF00484 Carbonic anhydrase JT746_21795 PF00156 Phosphoribosyl transferase domain JT746_21805 PF01011 PQQ enzyme repeat JT746_21810 PF07732 Multicopper oxidase JT746_21810 PF07731 Multicopper oxidase JT746_21810 PF00394 Multicopper oxidase JT746_21815 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) JT746_21830 PF17284 Spermidine synthase tetramerisation domain JT746_21835 PF02675 S-adenosylmethionine decarboxylase JT746_21840 PF06062 Uncharacterised protein family (UPF0231) JT746_21845 PF06434 Aconitate hydratase 2 N-terminus JT746_21845 PF00330 Aconitase family (aconitate hydratase) JT746_21845 PF11791 Aconitate B N-terminal domain JT746_21850 PF11737 Protein of unknown function (DUF3300) JT746_21865 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT746_21865 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_21870 PF00364 Biotin-requiring enzyme JT746_21870 PF02817 e3 binding domain JT746_21870 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JT746_21875 PF00456 Transketolase, thiamine diphosphate binding domain JT746_21875 PF17831 Pyruvate dehydrogenase E1 component middle domain JT746_21880 PF00392 Bacterial regulatory proteins, gntR family JT746_21880 PF07729 FCD domain JT746_21885 PF00324 Amino acid permease JT746_21895 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain JT746_21895 PF04616 Glycosyl hydrolases family 43 JT746_21900 PF17113 Regulatory signalling modulator protein AmpE JT746_21905 PF01510 N-acetylmuramoyl-L-alanine amidase JT746_21910 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JT746_21910 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JT746_21915 PF07963 Prokaryotic N-terminal methylation motif JT746_21920 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JT746_21920 PF00437 Type II/IV secretion system protein JT746_21925 PF00482 Type II secretion system (T2SS), protein F JT746_21930 PF00478 IMP dehydrogenase / GMP reductase domain JT746_21935 PF01121 Dephospho-CoA kinase JT746_21940 PF07072 Cell division protein JT746_21945 PF03884 DNA gyrase inhibitor YacG JT746_21950 PF00293 NUDIX domain JT746_21955 PF07516 SecA Wing and Scaffold domain JT746_21955 PF01043 SecA preprotein cross-linking domain JT746_21955 PF07517 SecA DEAD-like domain JT746_21955 PF02810 SEC-C motif JT746_21960 PF06558 Secretion monitor precursor protein (SecM) JT746_21965 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JT746_21970 PF12327 FtsZ family, C-terminal domain JT746_21970 PF00091 Tubulin/FtsZ family, GTPase domain JT746_21975 PF02491 SHS2 domain inserted in FTSA JT746_21980 PF03799 Cell division protein FtsQ JT746_21980 PF08478 POTRA domain, FtsQ-type JT746_21985 PF01820 D-ala D-ala ligase N-terminus JT746_21985 PF07478 D-ala D-ala ligase C-terminus JT746_21990 PF08245 Mur ligase middle domain JT746_21990 PF01225 Mur ligase family, catalytic domain JT746_21990 PF02875 Mur ligase family, glutamate ligase domain JT746_21995 PF03033 Glycosyltransferase family 28 N-terminal domain JT746_21995 PF04101 Glycosyltransferase family 28 C-terminal domain JT746_22000 PF01098 Cell cycle protein JT746_22005 PF02875 Mur ligase family, glutamate ligase domain JT746_22005 PF08245 Mur ligase middle domain JT746_22010 PF00953 Glycosyl transferase family 4 JT746_22010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JT746_22015 PF08245 Mur ligase middle domain JT746_22015 PF02875 Mur ligase family, glutamate ligase domain JT746_22015 PF01225 Mur ligase family, catalytic domain JT746_22020 PF01225 Mur ligase family, catalytic domain JT746_22020 PF02875 Mur ligase family, glutamate ligase domain JT746_22020 PF08245 Mur ligase middle domain JT746_22025 PF00905 Penicillin binding protein transpeptidase domain JT746_22025 PF03717 Penicillin-binding Protein dimerisation domain JT746_22030 PF04999 Cell division protein FtsL JT746_22035 PF01795 MraW methylase family JT746_22040 PF02381 MraZ protein, putative antitoxin-like JT746_22045 PF00356 Bacterial regulatory proteins, lacI family JT746_22045 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_22050 PF10369 Small subunit of acetolactate synthase JT746_22055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_22055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_22055 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_22060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_22060 PF03466 LysR substrate binding domain JT746_22070 PF00682 HMGL-like JT746_22070 PF08502 LeuA allosteric (dimerisation) domain JT746_22075 PF00180 Isocitrate/isopropylmalate dehydrogenase JT746_22080 PF00330 Aconitase family (aconitate hydratase) JT746_22085 PF00694 Aconitase C-terminal domain JT746_22090 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JT746_22090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_22095 PF08501 Shikimate dehydrogenase substrate binding domain JT746_22095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JT746_22100 PF07690 Major Facilitator Superfamily JT746_22105 PF01487 Type I 3-dehydroquinase JT746_22110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_22110 PF03466 LysR substrate binding domain JT746_22115 PF07690 Major Facilitator Superfamily JT746_22120 PF07690 Major Facilitator Superfamily JT746_22130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JT746_22130 PF12793 Sugar transport-related sRNA regulator N-term JT746_22140 PF00528 Binding-protein-dependent transport system inner membrane component JT746_22145 PF00005 ABC transporter JT746_22150 PF09335 SNARE associated Golgi protein JT746_22155 PF12833 Helix-turn-helix domain JT746_22155 PF02311 AraC-like ligand binding domain JT746_22160 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_22165 PF11762 L-arabinose isomerase C-terminal domain JT746_22165 PF02610 L-arabinose isomerase JT746_22170 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_22175 PF03104 DNA polymerase family B, exonuclease domain JT746_22175 PF00136 DNA polymerase family B JT746_22180 PF00176 SNF2 family N-terminal domain JT746_22180 PF12137 RNA polymerase recycling family C-terminal JT746_22180 PF18339 RapA N-terminal Tudor like domain 1 JT746_22180 PF00271 Helicase conserved C-terminal domain JT746_22180 PF18337 RapA N-terminal Tudor like domain JT746_22185 PF00849 RNA pseudouridylate synthase JT746_22190 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase JT746_22195 PF03390 2-hydroxycarboxylate transporter family JT746_22200 PF17203 Single cache domain 3 JT746_22200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_22205 PF12431 Transcriptional regulator JT746_22205 PF00072 Response regulator receiver domain JT746_22210 PF00226 DnaJ domain JT746_22210 PF05099 Tellurite resistance protein TerB JT746_22215 PF04453 LPS transport system D JT746_22215 PF03968 OstA-like protein JT746_22220 PF00639 PPIC-type PPIASE domain JT746_22220 PF09312 SurA N-terminal domain JT746_22225 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JT746_22230 PF00398 Ribosomal RNA adenine dimethylase JT746_22235 PF04379 ApaG domain JT746_22240 PF00149 Calcineurin-like phosphoesterase JT746_22245 PF00186 Dihydrofolate reductase JT746_22250 PF02254 TrkA-N domain JT746_22250 PF00999 Sodium/hydrogen exchanger family JT746_22255 PF02525 Flavodoxin-like fold JT746_22260 PF06004 Bacterial protein of unknown function (DUF903) JT746_22265 PF02142 MGS-like domain JT746_22265 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JT746_22265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JT746_22270 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JT746_22270 PF00117 Glutamine amidotransferase class-I JT746_22275 PF05173 Dihydrodipicolinate reductase, C-terminus JT746_22275 PF01113 Dihydrodipicolinate reductase, N-terminus JT746_22280 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase JT746_22285 PF04223 Citrate lyase, alpha subunit (CitF) JT746_22290 PF03328 HpcH/HpaI aldolase/citrate lyase family JT746_22295 PF06857 Malonate decarboxylase delta subunit (MdcD) JT746_22300 PF00583 Acetyltransferase (GNAT) family JT746_22300 PF08218 Citrate lyase ligase C-terminal domain JT746_22305 PF03390 2-hydroxycarboxylate transporter family JT746_22310 PF04277 Oxaloacetate decarboxylase, gamma chain JT746_22315 PF00364 Biotin-requiring enzyme JT746_22315 PF00682 HMGL-like JT746_22315 PF02436 Conserved carboxylase domain JT746_22320 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JT746_22325 PF17203 Single cache domain 3 JT746_22325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_22330 PF00072 Response regulator receiver domain JT746_22330 PF12431 Transcriptional regulator JT746_22340 PF03466 LysR substrate binding domain JT746_22340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_22350 PF00330 Aconitase family (aconitate hydratase) JT746_22350 PF00694 Aconitase C-terminal domain JT746_22355 PF00939 Sodium:sulfate symporter transmembrane region JT746_22360 PF00939 Sodium:sulfate symporter transmembrane region JT746_22365 PF04303 PrpF protein JT746_22370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_22370 PF03466 LysR substrate binding domain JT746_22375 PF01156 Inosine-uridine preferring nucleoside hydrolase JT746_22380 PF02401 LytB protein JT746_22385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT746_22390 PF01252 Signal peptidase (SPase) II JT746_22395 PF08264 Anticodon-binding domain of tRNA JT746_22395 PF00133 tRNA synthetases class I (I, L, M and V) JT746_22395 PF06827 Zinc finger found in FPG and IleRS JT746_22400 PF01687 Riboflavin kinase JT746_22400 PF06574 FAD synthetase JT746_22405 PF01649 Ribosomal protein S20 JT746_22410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_22410 PF03466 LysR substrate binding domain JT746_22415 PF06965 Na+/H+ antiporter 1 JT746_22425 PF13186 Iron-sulfur cluster-binding domain JT746_22425 PF04055 Radical SAM superfamily JT746_22430 PF00884 Sulfatase JT746_22430 PF16385 Domain of unknown function JT746_22440 PF00226 DnaJ domain JT746_22440 PF00684 DnaJ central domain JT746_22440 PF01556 DnaJ C terminal domain JT746_22445 PF00012 Hsp70 protein JT746_22450 PF10807 Protein of unknown function (DUF2541) JT746_22455 PF13099 Domain of unknown function (DUF3944) JT746_22455 PF03981 Ubiquinol-cytochrome C chaperone JT746_22460 PF01184 GPR1/FUN34/yaaH family JT746_22465 PF07690 Major Facilitator Superfamily JT746_22470 PF00994 Probable molybdopterin binding domain JT746_22475 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT746_22480 PF01235 Sodium:alanine symporter family JT746_22485 PF03883 Peroxide stress protein YaaA JT746_22490 PF14821 Threonine synthase N terminus JT746_22490 PF00291 Pyridoxal-phosphate dependent enzyme JT746_22495 PF08544 GHMP kinases C terminal JT746_22495 PF00288 GHMP kinases N terminal domain JT746_22500 PF03447 Homoserine dehydrogenase, NAD binding domain JT746_22500 PF00742 Homoserine dehydrogenase JT746_22500 PF01842 ACT domain JT746_22500 PF00696 Amino acid kinase family JT746_22500 PF13840 ACT domain JT746_22505 PF08254 Threonine leader peptide JT746_22510 PF00588 SpoU rRNA Methylase family JT746_22520 PF00486 Transcriptional regulatory protein, C terminal JT746_22520 PF00072 Response regulator receiver domain JT746_22525 PF06123 Inner membrane protein CreD JT746_22530 PF00672 HAMP domain JT746_22530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_22530 PF00512 His Kinase A (phospho-acceptor) domain JT746_22535 PF00486 Transcriptional regulatory protein, C terminal JT746_22535 PF00072 Response regulator receiver domain JT746_22540 PF05981 CreA protein JT746_22545 PF12833 Helix-turn-helix domain JT746_22545 PF06445 GyrI-like small molecule binding domain JT746_22550 PF00300 Histidine phosphatase superfamily (branch 1) JT746_22555 PF01931 Protein of unknown function DUF84 JT746_22560 PF01371 Trp repressor protein JT746_22565 PF14718 Soluble lytic murein transglycosylase L domain JT746_22565 PF01464 Transglycosylase SLT domain JT746_22570 PF00005 ABC transporter JT746_22570 PF12848 ABC transporter JT746_22575 PF01381 Helix-turn-helix JT746_22575 PF13521 AAA domain JT746_22580 PF18073 Rubredoxin metal binding domain JT746_22585 PF18429 Domain of unknown function (DUF5609) JT746_22590 PF10144 Bacterial virulence factor haemolysin JT746_22595 PF03099 Biotin/lipoate A/B protein ligase family JT746_22595 PF10437 Bacterial lipoate protein ligase C-terminus JT746_22600 PF01048 Phosphorylase superfamily JT746_22605 PF01676 Metalloenzyme superfamily JT746_22610 PF02885 Glycosyl transferase family, helical bundle domain JT746_22610 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JT746_22610 PF00591 Glycosyl transferase family, a/b domain JT746_22615 PF01791 DeoC/LacD family aldolase JT746_22620 PF07662 Na+ dependent nucleoside transporter C-terminus JT746_22620 PF01773 Na+ dependent nucleoside transporter N-terminus JT746_22620 PF07670 Nucleoside recognition JT746_22625 PF01026 TatD related DNase JT746_22630 PF01734 Patatin-like phospholipase JT746_22635 PF07043 Protein of unknown function (DUF1328) JT746_22640 PF04972 BON domain JT746_22645 PF03144 Elongation factor Tu domain 2 JT746_22645 PF16658 Class II release factor RF3, C-terminal domain JT746_22645 PF00009 Elongation factor Tu GTP binding domain JT746_22650 PF13419 Haloacid dehalogenase-like hydrolase JT746_22655 PF00583 Acetyltransferase (GNAT) family JT746_22660 PF03603 DNA polymerase III psi subunit JT746_22665 PF05175 Methyltransferase small domain JT746_22665 PF08468 Methyltransferase small domain N-terminal JT746_22685 PF07256 Protein of unknown function (DUF1435) JT746_22695 PF00990 Diguanylate cyclase, GGDEF domain JT746_22700 PF11575 FhuF 2Fe-2S C-terminal domain JT746_22700 PF06276 Ferric iron reductase FhuF-like transporter JT746_22705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_22705 PF02378 Phosphotransferase system, EIIC JT746_22710 PF04073 Aminoacyl-tRNA editing domain JT746_22715 PF00196 Bacterial regulatory proteins, luxR family JT746_22720 PF00196 Bacterial regulatory proteins, luxR family JT746_22730 PF01494 FAD binding domain JT746_22735 PF06738 Putative threonine/serine exporter JT746_22740 PF12821 Threonine/Serine exporter, ThrE JT746_22745 PF17948 DnaT DNA-binding domain JT746_22750 PF01695 IstB-like ATP binding protein JT746_22755 PF10696 Protein of unknown function (DUF2501) JT746_22760 PF00884 Sulfatase JT746_22765 PF04754 Putative transposase, YhgA-like JT746_22770 PF01380 SIS domain JT746_22775 PF01380 SIS domain JT746_22780 PF03613 PTS system mannose/fructose/sorbose family IID component JT746_22785 PF03609 PTS system sorbose-specific iic component JT746_22790 PF03830 PTS system sorbose subfamily IIB component JT746_22795 PF03610 PTS system fructose IIA component JT746_22795 PF03830 PTS system sorbose subfamily IIB component JT746_22800 PF00158 Sigma-54 interaction domain JT746_22800 PF00874 PRD domain JT746_22800 PF03610 PTS system fructose IIA component JT746_22805 PF00814 Glycoprotease family JT746_22805 PF00583 Acetyltransferase (GNAT) family JT746_22810 PF00583 Acetyltransferase (GNAT) family JT746_22815 PF01418 Helix-turn-helix domain, rpiR family JT746_22815 PF01380 SIS domain JT746_22820 PF01081 KDPG and KHG aldolase JT746_22825 PF05035 2-keto-3-deoxy-galactonokinase JT746_22830 PF00474 Sodium:solute symporter family JT746_22840 PF07969 Amidohydrolase family JT746_22855 PF02615 Malate/L-lactate dehydrogenase JT746_22860 PF13520 Amino acid permease JT746_22865 PF00171 Aldehyde dehydrogenase family JT746_22870 PF00701 Dihydrodipicolinate synthetase family JT746_22880 PF05544 Proline racemase JT746_22885 PF01266 FAD dependent oxidoreductase JT746_22895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_22895 PF04324 BFD-like [2Fe-2S] binding domain JT746_22900 PF01047 MarR family JT746_22910 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_22915 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_22920 PF00171 Aldehyde dehydrogenase family JT746_22925 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JT746_22930 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JT746_22935 PF01557 Fumarylacetoacetate (FAA) hydrolase family JT746_22940 PF03328 HpcH/HpaI aldolase/citrate lyase family JT746_22945 PF07690 Major Facilitator Superfamily JT746_22950 PF12833 Helix-turn-helix domain JT746_22955 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JT746_22955 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JT746_22960 PF01613 Flavin reductase like domain JT746_22965 PF13722 5TM C-terminal transporter carbon starvation CstA JT746_22965 PF02554 Carbon starvation protein CstA JT746_22970 PF04328 Selenoprotein, putative JT746_22975 PF02492 CobW/HypB/UreG, nucleotide-binding domain JT746_22975 PF07683 Cobalamin synthesis protein cobW C-terminal domain JT746_22990 PF00171 Aldehyde dehydrogenase family JT746_22995 PF04754 Putative transposase, YhgA-like JT746_23000 PF02311 AraC-like ligand binding domain JT746_23000 PF12833 Helix-turn-helix domain JT746_23010 PF04286 Protein of unknown function (DUF445) JT746_23015 PF07690 Major Facilitator Superfamily JT746_23025 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JT746_23030 PF01869 BadF/BadG/BcrA/BcrD ATPase family JT746_23035 PF11823 Protein of unknown function (DUF3343) JT746_23045 PF00529 HlyD membrane-fusion protein of T1SS JT746_23045 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_23055 PF06568 Domain of unknown function (DUF1127) JT746_23060 PF00155 Aminotransferase class I and II JT746_23060 PF00392 Bacterial regulatory proteins, gntR family JT746_23065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JT746_23070 PF03466 LysR substrate binding domain JT746_23070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_23075 PF02525 Flavodoxin-like fold JT746_23080 PF02653 Branched-chain amino acid transport system / permease component JT746_23085 PF02653 Branched-chain amino acid transport system / permease component JT746_23090 PF00005 ABC transporter JT746_23095 PF13407 Periplasmic binding protein domain JT746_23100 PF00579 tRNA synthetases class I (W and Y) JT746_23105 PF13533 Biotin-lipoyl like JT746_23110 PF00005 ABC transporter JT746_23150 PF08007 Cupin superfamily protein JT746_23155 PF00672 HAMP domain JT746_23155 PF00512 His Kinase A (phospho-acceptor) domain JT746_23155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_23160 PF00486 Transcriptional regulatory protein, C terminal JT746_23160 PF00072 Response regulator receiver domain JT746_23165 PF02321 Outer membrane efflux protein JT746_23170 PF11604 Copper binding periplasmic protein CusF JT746_23175 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_23175 PF00529 HlyD membrane-fusion protein of T1SS JT746_23180 PF00873 AcrB/AcrD/AcrF family JT746_23190 PF08212 Lipocalin-like domain JT746_23195 PF13411 MerR HTH family regulatory protein JT746_23205 PF00106 short chain dehydrogenase JT746_23240 PF08349 Protein of unknown function (DUF1722) JT746_23245 PF02264 LamB porin JT746_23260 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JT746_23260 PF04616 Glycosyl hydrolases family 43 JT746_23295 PF13361 UvrD-like helicase C-terminal domain JT746_23295 PF00580 UvrD/REP helicase N-terminal domain JT746_23305 PF00589 Phage integrase family JT746_23305 PF13356 Arm DNA-binding domain JT746_23310 PF00589 Phage integrase family JT746_23310 PF13356 Arm DNA-binding domain JT746_23320 PF00484 Carbonic anhydrase JT746_23325 PF01740 STAS domain JT746_23325 PF00916 Sulfate permease family JT746_23330 PF00107 Zinc-binding dehydrogenase JT746_23330 PF08240 Alcohol dehydrogenase GroES-like domain JT746_23335 PF00528 Binding-protein-dependent transport system inner membrane component JT746_23340 PF00528 Binding-protein-dependent transport system inner membrane component JT746_23345 PF00149 Calcineurin-like phosphoesterase JT746_23350 PF17912 MalK OB fold domain JT746_23350 PF00005 ABC transporter JT746_23355 PF13416 Bacterial extracellular solute-binding protein JT746_23360 PF01261 Xylose isomerase-like TIM barrel JT746_23365 PF01261 Xylose isomerase-like TIM barrel JT746_23370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_23370 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JT746_23375 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_23375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_23375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_23380 PF00294 pfkB family carbohydrate kinase JT746_23385 PF02685 Glucokinase JT746_23385 PF01380 SIS domain JT746_23385 PF01418 Helix-turn-helix domain, rpiR family JT746_23390 PF04962 KduI/IolB family JT746_23395 PF00171 Aldehyde dehydrogenase family JT746_23405 PF05872 Bacterial protein of unknown function (DUF853) JT746_23410 PF03739 Lipopolysaccharide export system permease LptF/LptG JT746_23415 PF03739 Lipopolysaccharide export system permease LptF/LptG JT746_23420 PF00883 Cytosol aminopeptidase family, catalytic domain JT746_23420 PF02789 Cytosol aminopeptidase family, N-terminal domain JT746_23425 PF04364 DNA polymerase III chi subunit, HolC JT746_23430 PF08264 Anticodon-binding domain of tRNA JT746_23430 PF10458 Valyl tRNA synthetase tRNA binding arm JT746_23430 PF00133 tRNA synthetases class I (I, L, M and V) JT746_23435 PF05987 Bacterial protein of unknown function (DUF898) JT746_23440 PF00583 Acetyltransferase (GNAT) family JT746_23445 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JT746_23450 PF06877 Regulator of ribonuclease activity B JT746_23455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JT746_23455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JT746_23460 PF04074 YhcH/YjgK/YiaL JT746_23470 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JT746_23470 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JT746_23475 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JT746_23475 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JT746_23480 PF01042 Endoribonuclease L-PSP JT746_23485 PF00690 Cation transporter/ATPase, N-terminus JT746_23485 PF00689 Cation transporting ATPase, C-terminus JT746_23490 PF00356 Bacterial regulatory proteins, lacI family JT746_23495 PF02378 Phosphotransferase system, EIIC JT746_23495 PF00367 phosphotransferase system, EIIB JT746_23500 PF11941 Domain of unknown function (DUF3459) JT746_23500 PF00128 Alpha amylase, catalytic domain JT746_23505 PF13597 Anaerobic ribonucleoside-triphosphate reductase JT746_23505 PF03477 ATP cone domain JT746_23515 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JT746_23520 PF04221 RelB antitoxin JT746_23525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_23525 PF05043 Mga helix-turn-helix domain JT746_23525 PF00874 PRD domain JT746_23525 PF08279 HTH domain JT746_23530 PF10282 Lactonase, 7-bladed beta-propeller JT746_23535 PF07071 KDGP aldolase JT746_23540 PF03841 L-seryl-tRNA selenium transferase JT746_23545 PF01979 Amidohydrolase family JT746_23575 PF07361 Cytochrome b562 JT746_23580 PF01523 Putative modulator of DNA gyrase JT746_23585 PF04751 Protein of unknown function (DUF615) JT746_23600 PF08245 Mur ligase middle domain JT746_23600 PF02875 Mur ligase family, glutamate ligase domain JT746_23600 PF01225 Mur ligase family, catalytic domain JT746_23605 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JT746_23610 PF02653 Branched-chain amino acid transport system / permease component JT746_23615 PF02653 Branched-chain amino acid transport system / permease component JT746_23620 PF00005 ABC transporter JT746_23625 PF13407 Periplasmic binding protein domain JT746_23630 PF00719 Inorganic pyrophosphatase JT746_23640 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JT746_23645 PF04357 TamB, inner membrane protein subunit of TAM complex JT746_23650 PF01103 Surface antigen JT746_23650 PF07244 Surface antigen variable number repeat JT746_23650 PF17243 POTRA domain TamA domain 1 JT746_23655 PF01625 Peptide methionine sulfoxide reductase JT746_23660 PF00571 CBS domain JT746_23660 PF03471 Transporter associated domain JT746_23660 PF01595 Cyclin M transmembrane N-terminal domain JT746_23665 PF01306 LacY proton/sugar symporter JT746_23670 PF08533 Beta-galactosidase C-terminal domain JT746_23670 PF08532 Beta-galactosidase trimerisation domain JT746_23670 PF02449 Beta-galactosidase JT746_23675 PF12833 Helix-turn-helix domain JT746_23675 PF02311 AraC-like ligand binding domain JT746_23680 PF06526 Protein of unknown function (DUF1107) JT746_23685 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JT746_23690 PF00459 Inositol monophosphatase family JT746_23695 PF00149 Calcineurin-like phosphoesterase JT746_23695 PF02872 5'-nucleotidase, C-terminal domain JT746_23700 PF01638 HxlR-like helix-turn-helix JT746_23705 PF05368 NmrA-like family JT746_23710 PF12833 Helix-turn-helix domain JT746_23715 PF00892 EamA-like transporter family JT746_23720 PF04405 Domain of Unknown function (DUF542) JT746_23720 PF01814 Hemerythrin HHE cation binding domain JT746_23725 PF00324 Amino acid permease JT746_23730 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JT746_23730 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JT746_23735 PF04225 Opacity-associated protein A LysM-like domain JT746_23735 PF08525 Opacity-associated protein A N-terminal motif JT746_23740 PF03948 Ribosomal protein L9, C-terminal domain JT746_23740 PF01281 Ribosomal protein L9, N-terminal domain JT746_23745 PF01084 Ribosomal protein S18 JT746_23750 PF00436 Single-strand binding protein family JT746_23755 PF01250 Ribosomal protein S6 JT746_23760 PF07338 Protein of unknown function (DUF1471) JT746_23765 PF07690 Major Facilitator Superfamily JT746_23775 PF00326 Prolyl oligopeptidase family JT746_23780 PF07338 Protein of unknown function (DUF1471) JT746_23785 PF07338 Protein of unknown function (DUF1471) JT746_23790 PF18158 Adaptive response protein AidB N-terminal domain JT746_23790 PF02770 Acyl-CoA dehydrogenase, middle domain JT746_23790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JT746_23795 PF00588 SpoU rRNA Methylase family JT746_23795 PF08032 RNA 2'-O ribose methyltransferase substrate binding JT746_23800 PF00773 RNB domain JT746_23800 PF08206 Ribonuclease B OB domain JT746_23800 PF00575 S1 RNA binding domain JT746_23800 PF08461 Ribonuclease R winged-helix domain JT746_23800 PF17876 Cold shock domain JT746_23805 PF02082 Transcriptional regulator JT746_23810 PF00709 Adenylosuccinate synthetase JT746_23815 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JT746_23825 PF01145 SPFH domain / Band 7 family JT746_23830 PF12221 Bacterial membrane protein N terminal JT746_23830 PF01145 SPFH domain / Band 7 family JT746_23835 PF01926 50S ribosome-binding GTPase JT746_23835 PF13167 GTP-binding GTPase N-terminal JT746_23835 PF16360 GTP-binding GTPase Middle Region JT746_23840 PF17209 Hfq protein JT746_23850 PF08676 MutL C terminal dimerisation domain JT746_23850 PF01119 DNA mismatch repair protein, C-terminal domain JT746_23855 PF01520 N-acetylmuramoyl-L-alanine amidase JT746_23860 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JT746_23865 PF01256 Carbohydrate kinase JT746_23865 PF03853 YjeF-related protein N-terminus JT746_23870 PF08331 Domain of unknown function (DUF1730) JT746_23890 PF00497 Bacterial extracellular solute-binding proteins, family 3 JT746_23895 PF00929 Exonuclease JT746_23900 PF03193 RsgA GTPase JT746_23905 PF02666 Phosphatidylserine decarboxylase JT746_23910 PF12795 Mechanosensitive ion channel porin domain JT746_23910 PF00924 Mechanosensitive ion channel JT746_23910 PF12794 Mechanosensitive ion channel inner membrane domain 1 JT746_23915 PF13520 Amino acid permease JT746_23920 PF00152 tRNA synthetases class II (D, K and N) JT746_23925 PF00890 FAD binding domain JT746_23925 PF02910 Fumarate reductase flavoprotein C-term JT746_23930 PF13183 4Fe-4S dicluster domain JT746_23930 PF13085 2Fe-2S iron-sulfur cluster binding domain JT746_23935 PF02300 Fumarate reductase subunit C JT746_23940 PF02313 Fumarate reductase subunit D JT746_23945 PF08212 Lipocalin-like domain JT746_23950 PF00893 Small Multidrug Resistance protein JT746_23955 PF08085 Entericidin EcnA/B family JT746_23960 PF08085 Entericidin EcnA/B family JT746_23965 PF08207 Elongation factor P (EF-P) KOW-like domain JT746_23965 PF01132 Elongation factor P (EF-P) OB domain JT746_23965 PF09285 Elongation factor P, C-terminal JT746_23970 PF04055 Radical SAM superfamily JT746_23975 PF00486 Transcriptional regulatory protein, C terminal JT746_23975 PF00072 Response regulator receiver domain JT746_23980 PF00419 Fimbrial protein JT746_23985 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_23985 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_23990 PF00577 Outer membrane usher protein JT746_23990 PF13954 PapC N-terminal domain JT746_23990 PF13953 PapC C-terminal domain JT746_23995 PF01609 Transposase DDE domain JT746_23995 PF05598 Transposase domain (DUF772) JT746_24000 PF00577 Outer membrane usher protein JT746_24000 PF13954 PapC N-terminal domain JT746_24000 PF13953 PapC C-terminal domain JT746_24015 PF00529 HlyD membrane-fusion protein of T1SS JT746_24015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_24030 PF03412 Peptidase C39 family JT746_24030 PF00664 ABC transporter transmembrane region JT746_24030 PF00005 ABC transporter JT746_24040 PF13698 Domain of unknown function (DUF4156) JT746_24045 PF00118 TCP-1/cpn60 chaperonin family JT746_24050 PF00166 Chaperonin 10 Kd subunit JT746_24055 PF13520 Amino acid permease JT746_24060 PF04186 FxsA cytoplasmic membrane protein JT746_24065 PF00206 Lyase JT746_24065 PF10415 Fumarase C C-terminus JT746_24070 PF03605 Anaerobic c4-dicarboxylate membrane transporter JT746_24075 PF03091 CutA1 divalent ion tolerance protein JT746_24080 PF02683 Cytochrome C biogenesis protein transmembrane region JT746_24080 PF11412 Disulphide bond corrector protein DsbC JT746_24115 PF14883 Hypothetical glycosyl hydrolase family 13 JT746_24115 PF01522 Polysaccharide deacetylase JT746_24120 PF00535 Glycosyl transferase family 2 JT746_24135 PF03741 Integral membrane protein TerC family JT746_24140 PF01556 DnaJ C terminal domain JT746_24140 PF00226 DnaJ domain JT746_24155 PF06406 StbA protein JT746_24165 PF02056 Family 4 glycosyl hydrolase JT746_24165 PF11975 Family 4 glycosyl hydrolase C-terminal domain JT746_24170 PF12833 Helix-turn-helix domain JT746_24175 PF08946 Osmosensory transporter coiled coil JT746_24175 PF00083 Sugar (and other) transporter JT746_24180 PF08274 PhnA Zinc-Ribbon JT746_24180 PF03831 PhnA domain JT746_24185 PF06983 3-demethylubiquinone-9 3-methyltransferase JT746_24190 PF00392 Bacterial regulatory proteins, gntR family JT746_24190 PF07702 UTRA domain JT746_24195 PF06754 Phosphonate metabolism protein PhnG JT746_24200 PF05845 Bacterial phosphonate metabolism protein (PhnH) JT746_24205 PF05861 Bacterial phosphonate metabolism protein (PhnI) JT746_24210 PF06007 Phosphonate metabolism protein PhnJ JT746_24215 PF00005 ABC transporter JT746_24220 PF00005 ABC transporter JT746_24225 PF07969 Amidohydrolase family JT746_24235 PF12706 Beta-lactamase superfamily domain JT746_24245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_24245 PF13426 PAS domain JT746_24245 PF00072 Response regulator receiver domain JT746_24250 PF00005 ABC transporter JT746_24255 PF02653 Branched-chain amino acid transport system / permease component JT746_24260 PF13407 Periplasmic binding protein domain JT746_24270 PF00486 Transcriptional regulatory protein, C terminal JT746_24270 PF00072 Response regulator receiver domain JT746_24280 PF08238 Sel1 repeat JT746_24285 PF00375 Sodium:dicarboxylate symporter family JT746_24295 PF00501 AMP-binding enzyme JT746_24295 PF16177 Acetyl-coenzyme A synthetase N-terminus JT746_24295 PF13193 AMP-binding enzyme C-terminal domain JT746_24300 PF04341 Protein of unknown function, DUF485 JT746_24305 PF00474 Sodium:solute symporter family JT746_24320 PF13953 PapC C-terminal domain JT746_24320 PF13954 PapC N-terminal domain JT746_24320 PF00577 Outer membrane usher protein JT746_24325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain JT746_24325 PF02753 Pili assembly chaperone PapD, C-terminal domain JT746_24330 PF00419 Fimbrial protein JT746_24335 PF04172 LrgB-like family JT746_24340 PF03788 LrgA family JT746_24345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_24345 PF03466 LysR substrate binding domain JT746_24350 PF00999 Sodium/hydrogen exchanger family JT746_24355 PF00860 Permease family JT746_24360 PF00043 Glutathione S-transferase, C-terminal domain JT746_24360 PF02798 Glutathione S-transferase, N-terminal domain JT746_24365 PF09278 MerR, DNA binding JT746_24365 PF00376 MerR family regulatory protein JT746_24370 PF12833 Helix-turn-helix domain JT746_24375 PF00563 EAL domain JT746_24375 PF12792 CSS motif domain associated with EAL JT746_24380 PF15940 Family of unknown function JT746_24385 PF00528 Binding-protein-dependent transport system inner membrane component JT746_24400 PF00005 ABC transporter JT746_24400 PF17912 MalK OB fold domain JT746_24405 PF12706 Beta-lactamase superfamily domain JT746_24405 PF00753 Metallo-beta-lactamase superfamily JT746_24410 PF00356 Bacterial regulatory proteins, lacI family JT746_24415 PF00459 Inositol monophosphatase family JT746_24425 PF01103 Surface antigen JT746_24425 PF07244 Surface antigen variable number repeat JT746_24430 PF07519 Tannase and feruloyl esterase JT746_24435 PF12833 Helix-turn-helix domain JT746_24440 PF00593 TonB dependent receptor JT746_24440 PF07715 TonB-dependent Receptor Plug Domain JT746_24445 PF01464 Transglycosylase SLT domain JT746_24450 PF00436 Single-strand binding protein family JT746_24455 PF17760 UvrA interaction domain JT746_24455 PF17755 UvrA DNA-binding domain JT746_24455 PF00005 ABC transporter JT746_24460 PF04237 YjbR JT746_24465 PF01894 Uncharacterised protein family UPF0047 JT746_24470 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JT746_24475 PF00155 Aminotransferase class I and II JT746_24480 PF00842 Alanine racemase, C-terminal domain JT746_24480 PF01168 Alanine racemase, N-terminal domain JT746_24485 PF00772 DnaB-like helicase N terminal domain JT746_24485 PF03796 DnaB-like helicase C terminal domain JT746_24490 PF08240 Alcohol dehydrogenase GroES-like domain JT746_24490 PF00107 Zinc-binding dehydrogenase JT746_24495 PF09583 Phage shock protein G (Phageshock_PspG) JT746_24500 PF01207 Dihydrouridine synthase (Dus) JT746_24510 PF01475 Ferric uptake regulator family JT746_24515 PF05532 CsbD-like JT746_24520 PF01554 MatE JT746_24525 PF00717 Peptidase S24-like JT746_24525 PF01726 LexA DNA binding domain JT746_24530 PF01219 Prokaryotic diacylglycerol kinase JT746_24535 PF01553 Acyltransferase JT746_24540 PF01040 UbiA prenyltransferase family JT746_24545 PF04345 Chorismate lyase JT746_24550 PF07148 Maltose operon periplasmic protein precursor (MalM) JT746_24555 PF02264 LamB porin JT746_24560 PF17912 MalK OB fold domain JT746_24560 PF00005 ABC transporter JT746_24565 PF01547 Bacterial extracellular solute-binding protein JT746_24570 PF00528 Binding-protein-dependent transport system inner membrane component JT746_24570 PF14785 Maltose transport system permease protein MalF P2 domain JT746_24575 PF00528 Binding-protein-dependent transport system inner membrane component JT746_24580 PF06146 Phosphate-starvation-inducible E JT746_24585 PF03313 Serine dehydratase alpha chain JT746_24600 PF01042 Endoribonuclease L-PSP JT746_24610 PF12804 MobA-like NTP transferase domain JT746_24610 PF14602 Hexapeptide repeat of succinyl-transferase JT746_24610 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_24615 PF00342 Phosphoglucose isomerase JT746_24620 PF01842 ACT domain JT746_24620 PF00696 Amino acid kinase family JT746_24625 PF01758 Sodium Bile acid symporter family JT746_24630 PF11656 YjbD family (DUF3811) JT746_24635 PF00849 RNA pseudouridylate synthase JT746_24635 PF01479 S4 domain JT746_24640 PF13936 Helix-turn-helix domain JT746_24640 PF04198 Putative sugar-binding domain JT746_24645 PF00106 short chain dehydrogenase JT746_24650 PF03610 PTS system fructose IIA component JT746_24655 PF03830 PTS system sorbose subfamily IIB component JT746_24660 PF03609 PTS system sorbose-specific iic component JT746_24665 PF03613 PTS system mannose/fructose/sorbose family IID component JT746_24670 PF08240 Alcohol dehydrogenase GroES-like domain JT746_24670 PF00107 Zinc-binding dehydrogenase JT746_24675 PF08501 Shikimate dehydrogenase substrate binding domain JT746_24680 PF02690 Na+/Pi-cotransporter JT746_24685 PF02574 Homocysteine S-methyltransferase JT746_24685 PF02965 Vitamin B12 dependent methionine synthase, activation domain JT746_24685 PF02310 B12 binding domain JT746_24685 PF00809 Pterin binding enzyme JT746_24685 PF02607 B12 binding domain JT746_24690 PF01614 Bacterial transcriptional regulator JT746_24690 PF09339 IclR helix-turn-helix domain JT746_24695 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) JT746_24700 PF00463 Isocitrate lyase family JT746_24705 PF01274 Malate synthase JT746_24710 PF04204 Homoserine O-succinyltransferase JT746_24715 PF13673 Acetyltransferase (GNAT) domain JT746_24740 PF01808 AICARFT/IMPCHase bienzyme JT746_24740 PF02142 MGS-like domain JT746_24745 PF02844 Phosphoribosylglycinamide synthetase, N domain JT746_24745 PF02843 Phosphoribosylglycinamide synthetase, C domain JT746_24745 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JT746_24750 PF00158 Sigma-54 interaction domain JT746_24750 PF02954 Bacterial regulatory protein, Fis family JT746_24750 PF00072 Response regulator receiver domain JT746_24755 PF00512 His Kinase A (phospho-acceptor) domain JT746_24755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_24760 PF13801 Heavy-metal resistance JT746_24765 PF07356 Protein of unknown function (DUF1481) JT746_24770 PF00216 Bacterial DNA-binding protein JT746_24775 PF04222 Protein of unknown function (DUF416) JT746_24780 PF04493 Endonuclease V JT746_24785 PF01208 Uroporphyrinogen decarboxylase (URO-D) JT746_24790 PF09297 NADH pyrophosphatase zinc ribbon domain JT746_24790 PF00293 NUDIX domain JT746_24795 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JT746_24800 PF01964 Radical SAM ThiC family JT746_24800 PF13667 ThiC-associated domain JT746_24805 PF02581 Thiamine monophosphate synthase JT746_24810 PF00899 ThiF family JT746_24815 PF02597 ThiS family JT746_24820 PF05690 Thiazole biosynthesis protein ThiG JT746_24825 PF06968 Biotin and Thiamin Synthesis associated domain JT746_24825 PF04055 Radical SAM superfamily JT746_24830 PF00990 Diguanylate cyclase, GGDEF domain JT746_24835 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JT746_24840 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JT746_24845 PF03605 Anaerobic c4-dicarboxylate membrane transporter JT746_24850 PF05000 RNA polymerase Rpb1, domain 4 JT746_24850 PF00623 RNA polymerase Rpb1, domain 2 JT746_24850 PF04998 RNA polymerase Rpb1, domain 5 JT746_24850 PF04997 RNA polymerase Rpb1, domain 1 JT746_24850 PF04983 RNA polymerase Rpb1, domain 3 JT746_24855 PF04565 RNA polymerase Rpb2, domain 3 JT746_24855 PF04560 RNA polymerase Rpb2, domain 7 JT746_24855 PF10385 RNA polymerase beta subunit external 1 domain JT746_24855 PF04563 RNA polymerase beta subunit JT746_24855 PF04561 RNA polymerase Rpb2, domain 2 JT746_24855 PF00562 RNA polymerase Rpb2, domain 6 JT746_24860 PF16320 Ribosomal protein L7/L12 dimerisation domain JT746_24860 PF00542 Ribosomal protein L7/L12 C-terminal domain JT746_24865 PF00466 Ribosomal protein L10 JT746_24870 PF00687 Ribosomal protein L1p/L10e family JT746_24875 PF00298 Ribosomal protein L11, RNA binding domain JT746_24875 PF03946 Ribosomal protein L11, N-terminal domain JT746_24880 PF02357 Transcription termination factor nusG JT746_24880 PF00467 KOW motif JT746_24885 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JT746_24890 PF03143 Elongation factor Tu C-terminal domain JT746_24890 PF00009 Elongation factor Tu GTP binding domain JT746_24890 PF03144 Elongation factor Tu domain 2 JT746_24915 PF00485 Phosphoribulokinase / Uridine kinase family JT746_24920 PF03099 Biotin/lipoate A/B protein ligase family JT746_24920 PF08279 HTH domain JT746_24920 PF02237 Biotin protein ligase C terminal domain JT746_24925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JT746_24925 PF01565 FAD binding domain JT746_24955 PF12724 Flavodoxin domain JT746_24960 PF02386 Cation transport protein JT746_24965 PF01205 Uncharacterized protein family UPF0029 JT746_24965 PF09186 Domain of unknown function (DUF1949) JT746_24970 PF00557 Metallopeptidase family M24 JT746_24975 PF00378 Enoyl-CoA hydratase/isomerase JT746_24975 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JT746_24975 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JT746_24980 PF00108 Thiolase, N-terminal domain JT746_24980 PF02803 Thiolase, C-terminal domain JT746_24985 PF00970 Oxidoreductase FAD-binding domain JT746_24985 PF00175 Oxidoreductase NAD-binding domain JT746_24990 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JT746_24995 PF02357 Transcription termination factor nusG JT746_25000 PF01026 TatD related DNase JT746_25005 PF00902 Sec-independent protein translocase protein (TatC) JT746_25015 PF02416 mttA/Hcf106 family JT746_25020 PF03109 ABC1 family JT746_25025 PF02036 SCP-2 sterol transfer family JT746_25030 PF01209 ubiE/COQ5 methyltransferase family JT746_25035 PF02646 RmuC family JT746_25040 PF01048 Phosphorylase superfamily JT746_25045 PF01738 Dienelactone hydrolase family JT746_25050 PF01717 Cobalamin-independent synthase, Catalytic domain JT746_25050 PF08267 Cobalamin-independent synthase, N-terminal domain JT746_25055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_25055 PF03466 LysR substrate binding domain JT746_25060 PF00892 EamA-like transporter family JT746_25070 PF12146 Serine aminopeptidase, S33 JT746_25075 PF01810 LysE type translocator JT746_25080 PF04754 Putative transposase, YhgA-like JT746_25085 PF01810 LysE type translocator JT746_25090 PF09382 RQC domain JT746_25090 PF00570 HRDC domain JT746_25090 PF00271 Helicase conserved C-terminal domain JT746_25090 PF00270 DEAD/DEAH box helicase JT746_25090 PF16124 RecQ zinc-binding JT746_25095 PF02253 Phospholipase A1 JT746_25100 PF03061 Thioesterase superfamily JT746_25105 PF00892 EamA-like transporter family JT746_25110 PF01544 CorA-like Mg2+ transporter protein JT746_25115 PF13361 UvrD-like helicase C-terminal domain JT746_25115 PF00580 UvrD/REP helicase N-terminal domain JT746_25120 PF13419 Haloacid dehalogenase-like hydrolase JT746_25125 PF02899 Phage integrase, N-terminal SAM-like domain JT746_25125 PF00589 Phage integrase family JT746_25130 PF04340 Protein of unknown function, DUF484 JT746_25135 PF01678 Diaminopimelate epimerase JT746_25140 PF13627 Prokaryotic lipoprotein-attachment site JT746_25145 PF01491 Frataxin-like domain JT746_25150 PF01295 Adenylate cyclase, class-I JT746_25150 PF12633 Adenylate cyclase NT domain JT746_25155 PF03900 Porphobilinogen deaminase, C-terminal domain JT746_25155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JT746_25160 PF02602 Uroporphyrinogen-III synthase HemD JT746_25165 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JT746_25170 PF07219 HemY protein N-terminus JT746_25170 PF07719 Tetratricopeptide repeat JT746_25195 PF00324 Amino acid permease JT746_25200 PF03808 Glycosyl transferase WecB/TagA/CpsF family JT746_25205 PF06899 WzyE protein, O-antigen assembly polymerase JT746_25210 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 JT746_25215 PF01943 Polysaccharide biosynthesis protein JT746_25220 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JT746_25230 PF00483 Nucleotidyl transferase JT746_25235 PF16363 GDP-mannose 4,6 dehydratase JT746_25240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JT746_25240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JT746_25240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JT746_25245 PF02350 UDP-N-acetylglucosamine 2-epimerase JT746_25250 PF02706 Chain length determinant protein JT746_25255 PF00953 Glycosyl transferase family 4 JT746_25260 PF07497 Rho termination factor, RNA-binding domain JT746_25260 PF07498 Rho termination factor, N-terminal domain JT746_25260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT746_25265 PF00085 Thioredoxin JT746_25270 PF00270 DEAD/DEAH box helicase JT746_25270 PF00271 Helicase conserved C-terminal domain JT746_25275 PF02541 Ppx/GppA phosphatase family JT746_25280 PF00580 UvrD/REP helicase N-terminal domain JT746_25280 PF13361 UvrD-like helicase C-terminal domain JT746_25295 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JT746_25295 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JT746_25300 PF03466 LysR substrate binding domain JT746_25300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_25305 PF00585 C-terminal regulatory domain of Threonine dehydratase JT746_25305 PF00291 Pyridoxal-phosphate dependent enzyme JT746_25310 PF00920 Dehydratase family JT746_25315 PF01063 Amino-transferase class IV JT746_25325 PF00205 Thiamine pyrophosphate enzyme, central domain JT746_25325 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JT746_25325 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JT746_25335 PF08046 IlvGEDA operon leader peptide JT746_25340 PF01078 Magnesium chelatase, subunit ChlI JT746_25340 PF13335 Magnesium chelatase, subunit ChlI C-terminal JT746_25345 PF04219 Protein of unknown function, DUF JT746_25350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_25350 PF03466 LysR substrate binding domain JT746_25390 PF01177 Asp/Glu/Hydantoin racemase JT746_25395 PF00593 TonB dependent receptor JT746_25395 PF07715 TonB-dependent Receptor Plug Domain JT746_25400 PF05958 tRNA (Uracil-5-)-methyltransferase JT746_25405 PF07226 Protein of unknown function (DUF1422) JT746_25410 PF00440 Bacterial regulatory proteins, tetR family JT746_25415 PF07992 Pyridine nucleotide-disulphide oxidoreductase JT746_25415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JT746_25420 PF03466 LysR substrate binding domain JT746_25420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_25425 PF00206 Lyase JT746_25425 PF14698 Argininosuccinate lyase C-terminal JT746_25430 PF00696 Amino acid kinase family JT746_25435 PF02774 Semialdehyde dehydrogenase, dimerisation domain JT746_25435 PF01118 Semialdehyde dehydrogenase, NAD binding domain JT746_25440 PF07687 Peptidase dimerisation domain JT746_25440 PF01546 Peptidase family M20/M25/M40 JT746_25445 PF00311 Phosphoenolpyruvate carboxylase JT746_25450 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment JT746_25455 PF12833 Helix-turn-helix domain JT746_25460 PF00923 Transaldolase/Fructose-6-phosphate aldolase JT746_25465 PF00465 Iron-containing alcohol dehydrogenase JT746_25470 PF02219 Methylenetetrahydrofolate reductase JT746_25475 PF03466 LysR substrate binding domain JT746_25475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_25480 PF02627 Carboxymuconolactone decarboxylase family JT746_25485 PF03447 Homoserine dehydrogenase, NAD binding domain JT746_25485 PF00696 Amino acid kinase family JT746_25485 PF00742 Homoserine dehydrogenase JT746_25490 PF01053 Cys/Met metabolism PLP-dependent enzyme JT746_25495 PF01340 Met Apo-repressor, MetJ JT746_25500 PF01197 Ribosomal protein L31 JT746_25505 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JT746_25505 PF17764 3′ DNA-binding domain (3′BD) JT746_25505 PF00271 Helicase conserved C-terminal domain JT746_25505 PF00270 DEAD/DEAH box helicase JT746_25505 PF18074 Primosomal protein N C-terminal domain JT746_25510 PF00356 Bacterial regulatory proteins, lacI family JT746_25515 PF05036 Sporulation related domain JT746_25520 PF00227 Proteasome subunit JT746_25525 PF00004 ATPase family associated with various cellular activities (AAA) JT746_25525 PF10431 C-terminal, D2-small domain, of ClpB protein JT746_25525 PF07724 AAA domain (Cdc48 subfamily) JT746_25530 PF01040 UbiA prenyltransferase family JT746_25535 PF03737 Aldolase/RraA JT746_25540 PF00365 Phosphofructokinase JT746_25545 PF01545 Cation efflux family JT746_25545 PF16916 Dimerisation domain of Zinc Transporter JT746_25550 PF07813 LTXXQ motif family protein JT746_25555 PF00072 Response regulator receiver domain JT746_25555 PF00486 Transcriptional regulatory protein, C terminal JT746_25560 PF00512 His Kinase A (phospho-acceptor) domain JT746_25560 PF00672 HAMP domain JT746_25560 PF16527 Two-component sensor protein CpxA, periplasmic domain JT746_25560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_25565 PF03475 3-alpha domain JT746_25565 PF03473 MOSC domain JT746_25570 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JT746_25570 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JT746_25575 PF06379 L-rhamnose-proton symport protein (RhaT) JT746_25580 PF02311 AraC-like ligand binding domain JT746_25580 PF12833 Helix-turn-helix domain JT746_25585 PF12833 Helix-turn-helix domain JT746_25585 PF02311 AraC-like ligand binding domain JT746_25590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JT746_25590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JT746_25595 PF06134 L-rhamnose isomerase (RhaA) JT746_25600 PF00596 Class II Aldolase and Adducin N-terminal domain JT746_25605 PF13407 Periplasmic binding protein domain JT746_25610 PF00005 ABC transporter JT746_25615 PF02653 Branched-chain amino acid transport system / permease component JT746_25620 PF02653 Branched-chain amino acid transport system / permease component JT746_25625 PF00465 Iron-containing alcohol dehydrogenase JT746_25630 PF05336 L-rhamnose mutarotase JT746_25640 PF05048 Periplasmic copper-binding protein (NosD) JT746_25640 PF18835 Beta helix repeat of Inulin fructotransferase JT746_25645 PF08244 Glycosyl hydrolases family 32 C terminal JT746_25645 PF00251 Glycosyl hydrolases family 32 N-terminal domain JT746_25655 PF00356 Bacterial regulatory proteins, lacI family JT746_25660 PF01306 LacY proton/sugar symporter JT746_25665 PF16875 Glycosyl hydrolase family 36 N-terminal domain JT746_25665 PF16874 Glycosyl hydrolase family 36 C-terminal domain JT746_25670 PF00356 Bacterial regulatory proteins, lacI family JT746_25670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JT746_25695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JT746_25705 PF01116 Fructose-bisphosphate aldolase class-II JT746_25710 PF03611 PTS system sugar-specific permease component JT746_25720 PF00365 Phosphofructokinase JT746_25730 PF02634 FdhD/NarQ family JT746_25740 PF09163 Formate dehydrogenase N, transmembrane JT746_25740 PF13247 4Fe-4S dicluster domain JT746_25745 PF01292 Prokaryotic cytochrome b561 JT746_25750 PF04216 Protein involved in formate dehydrogenase formation JT746_25755 PF07859 alpha/beta hydrolase fold JT746_25760 PF00583 Acetyltransferase (GNAT) family JT746_25760 PF09500 Putative thioesterase (yiiD_Cterm) JT746_25765 PF02580 D-Tyr-tRNA(Tyr) deacylase JT746_25770 PF03631 Virulence factor BrkB JT746_25775 PF13419 Haloacid dehalogenase-like hydrolase JT746_25780 PF07690 Major Facilitator Superfamily JT746_25785 PF01261 Xylose isomerase-like TIM barrel JT746_25790 PF07702 UTRA domain JT746_25790 PF00392 Bacterial regulatory proteins, gntR family JT746_25795 PF00679 Elongation factor G C-terminus JT746_25795 PF00009 Elongation factor Tu GTP binding domain JT746_25795 PF03144 Elongation factor Tu domain 2 JT746_25800 PF03951 Glutamine synthetase, beta-Grasp domain JT746_25800 PF00120 Glutamine synthetase, catalytic domain JT746_25805 PF00989 PAS fold JT746_25805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_25805 PF00512 His Kinase A (phospho-acceptor) domain JT746_25810 PF00158 Sigma-54 interaction domain JT746_25810 PF02954 Bacterial regulatory protein, Fis family JT746_25810 PF00072 Response regulator receiver domain JT746_25820 PF06969 HemN C-terminal domain JT746_25820 PF04055 Radical SAM superfamily JT746_25825 PF04220 Der GTPase activator (YihI) JT746_25830 PF01926 50S ribosome-binding GTPase JT746_25835 PF00476 DNA polymerase family A JT746_25835 PF01612 3'-5' exonuclease JT746_25835 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JT746_25835 PF01367 5'-3' exonuclease, C-terminal SAM fold JT746_25840 PF01553 Acyltransferase JT746_25845 PF01323 DSBA-like thioredoxin domain JT746_25850 PF01636 Phosphotransferase enzyme family JT746_25855 PF06288 Protein of unknown function (DUF1040) JT746_25860 PF12804 MobA-like NTP transferase domain JT746_25865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JT746_25890 PF00392 Bacterial regulatory proteins, gntR family JT746_25890 PF07729 FCD domain JT746_25895 PF07690 Major Facilitator Superfamily JT746_25900 PF00356 Bacterial regulatory proteins, lacI family JT746_25905 PF00294 pfkB family carbohydrate kinase JT746_25910 PF13407 Periplasmic binding protein domain JT746_25915 PF02653 Branched-chain amino acid transport system / permease component JT746_25920 PF00005 ABC transporter JT746_25925 PF05025 RbsD / FucU transport protein family JT746_25930 PF02705 K+ potassium transporter JT746_25935 PF12592 Protein of unknown function (DUF3763) JT746_25935 PF07728 AAA domain (dynein-related subfamily) JT746_25935 PF17868 AAA lid domain JT746_25940 PF05762 VWA domain containing CoxE-like protein JT746_25945 PF03590 Aspartate-ammonia ligase JT746_25950 PF01037 Lrp/AsnC ligand binding domain JT746_25955 PF00258 Flavodoxin JT746_25960 PF01134 Glucose inhibited division protein A JT746_25960 PF13932 GidA associated domain JT746_25965 PF02527 rRNA small subunit methyltransferase G JT746_25970 PF03899 ATP synthase I chain JT746_25975 PF00119 ATP synthase A chain JT746_25980 PF00137 ATP synthase subunit C JT746_25985 PF00430 ATP synthase B/B' CF(0) JT746_25990 PF00213 ATP synthase delta (OSCP) subunit JT746_25995 PF02874 ATP synthase alpha/beta family, beta-barrel domain JT746_25995 PF00306 ATP synthase alpha/beta chain, C terminal domain JT746_25995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT746_26000 PF00231 ATP synthase JT746_26005 PF02874 ATP synthase alpha/beta family, beta-barrel domain JT746_26005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JT746_26010 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JT746_26010 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JT746_26015 PF12804 MobA-like NTP transferase domain JT746_26015 PF00132 Bacterial transferase hexapeptide (six repeats) JT746_26020 PF01380 SIS domain JT746_26025 PF12849 PBP superfamily domain JT746_26030 PF00528 Binding-protein-dependent transport system inner membrane component JT746_26035 PF00528 Binding-protein-dependent transport system inner membrane component JT746_26040 PF00005 ABC transporter JT746_26045 PF01895 PhoU domain JT746_26050 PF11471 Maltoporin periplasmic N-terminal extension JT746_26050 PF02264 LamB porin JT746_26055 PF00756 Putative esterase JT746_26055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT746_26060 PF13419 Haloacid dehalogenase-like hydrolase JT746_26065 PF00860 Permease family JT746_26070 PF03358 NADPH-dependent FMN reductase JT746_26080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_26080 PF03466 LysR substrate binding domain JT746_26085 PF07690 Major Facilitator Superfamily JT746_26095 PF01926 50S ribosome-binding GTPase JT746_26095 PF12631 MnmE helical domain JT746_26095 PF10396 GTP-binding protein TrmE N-terminus JT746_26100 PF14849 YidC periplasmic domain JT746_26100 PF02096 60Kd inner membrane protein JT746_26105 PF01809 Putative membrane protein insertion efficiency factor JT746_26110 PF00825 Ribonuclease P JT746_26115 PF00468 Ribosomal protein L34 JT746_26120 PF01051 Initiator Replication protein JT746_26125 PF00589 Phage integrase family JT746_26145 PF01306 LacY proton/sugar symporter JT746_26150 PF02837 Glycosyl hydrolases family 2, sugar binding domain JT746_26150 PF16353 Domain of unknown function(DUF4981) JT746_26150 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JT746_26150 PF02929 Beta galactosidase small chain JT746_26150 PF00703 Glycosyl hydrolases family 2 JT746_26155 PF00356 Bacterial regulatory proteins, lacI family JT746_26160 PF00107 Zinc-binding dehydrogenase JT746_26160 PF08240 Alcohol dehydrogenase GroES-like domain JT746_26170 PF02796 Helix-turn-helix domain of resolvase JT746_26170 PF00239 Resolvase, N terminal domain JT746_26185 PF03358 NADPH-dependent FMN reductase JT746_26190 PF01022 Bacterial regulatory protein, arsR family JT746_26195 PF02040 Arsenical pump membrane protein JT746_26200 PF03960 ArsC family JT746_26215 PF05717 IS66 Orf2 like protein JT746_26220 PF00005 ABC transporter JT746_26225 PF01032 FecCD transport family JT746_26230 PF01032 FecCD transport family JT746_26235 PF01497 Periplasmic binding protein JT746_26240 PF07660 Secretin and TonB N terminus short domain JT746_26240 PF00593 TonB dependent receptor JT746_26240 PF07715 TonB-dependent Receptor Plug Domain JT746_26245 PF16220 Domain of unknown function (DUF4880) JT746_26245 PF04773 FecR protein JT746_26250 PF08281 Sigma-70, region 4 JT746_26250 PF04542 Sigma-70 region 2 JT746_26260 PF01321 Creatinase/Prolidase N-terminal domain JT746_26260 PF00557 Metallopeptidase family M24 JT746_26265 PF03466 LysR substrate binding domain JT746_26265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JT746_26275 PF00528 Binding-protein-dependent transport system inner membrane component JT746_26280 PF00528 Binding-protein-dependent transport system inner membrane component JT746_26285 PF00005 ABC transporter JT746_26305 PF00589 Phage integrase family JT746_26340 PF00672 HAMP domain JT746_26340 PF00512 His Kinase A (phospho-acceptor) domain JT746_26340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JT746_26345 PF00486 Transcriptional regulatory protein, C terminal JT746_26345 PF00072 Response regulator receiver domain JT746_26350 PF02321 Outer membrane efflux protein JT746_26355 PF11604 Copper binding periplasmic protein CusF JT746_26360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JT746_26365 PF00873 AcrB/AcrD/AcrF family JT746_26375 PF04945 YHS domain JT746_26385 PF01551 Peptidase family M23 JT746_26385 PF01476 LysM domain JT746_26385 PF08525 Opacity-associated protein A N-terminal motif JT746_26400 PF13610 DDE domain JT746_26405 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JT746_26405 PF00128 Alpha amylase, catalytic domain JT746_26405 PF02806 Alpha amylase, C-terminal all-beta domain JT746_26410 PF00483 Nucleotidyl transferase JT746_26415 PF00534 Glycosyl transferases group 1 JT746_26415 PF08323 Starch synthase catalytic domain JT746_26420 PF00343 Carbohydrate phosphorylase JT746_26425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JT746_26425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JT746_26425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JT746_26425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JT746_26485 PF05717 IS66 Orf2 like protein JT746_26490 PF13007 Transposase C of IS166 homeodomain JT746_26490 PF13817 IS66 C-terminal element JT746_26490 PF03050 Transposase IS66 family JT746_26490 PF13005 zinc-finger binding domain of transposase IS66 JT746_26505 PF00990 Diguanylate cyclase, GGDEF domain JT746_26515 PF02463 RecF/RecN/SMC N terminal domain JT746_26520 PF01850 PIN domain JT746_26525 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JT746_26535 PF07362 Post-segregation antitoxin CcdA JT746_26540 PF01845 CcdB protein JT746_26560 PF13610 DDE domain JT746_26605 PF01464 Transglycosylase SLT domain JT746_26615 PF06067 Domain of unknown function (DUF932) JT746_26620 PF01381 Helix-turn-helix JT746_26660 PF01848 Hok/gef family JT746_26710 PF07690 Major Facilitator Superfamily JT746_26720 PF03824 High-affinity nickel-transport protein JT746_26725 PF04076 Bacterial OB fold (BOF) protein JT746_26750 PF06290 Plasmid SOS inhibition protein (PsiB) JT746_26755 PF02195 ParB-like nuclease domain JT746_26760 PF06006 Bacterial protein of unknown function (DUF905) JT746_26765 PF00436 Single-strand binding protein family JT746_26810 PF01610 Transposase JT746_26810 PF13542 Helix-turn-helix domain of transposase family ISL3 JT746_26810 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JT746_26815 PF00717 Peptidase S24-like JT746_26820 PF13438 Domain of unknown function (DUF4113) JT746_26820 PF00817 impB/mucB/samB family JT746_26820 PF11799 impB/mucB/samB family C-terminal domain JT746_26835 PF18090 Centromere-binding protein HTH domain JT746_26835 PF02195 ParB-like nuclease domain JT746_26840 PF13614 AAA domain JT746_26900 PF00816 H-NS histone family JT746_26905 PF01131 DNA topoisomerase JT746_26905 PF01751 Toprim domain JT746_26910 PF01434 Peptidase family M41 JT746_26910 PF06480 FtsH Extracellular JT746_26910 PF17862 AAA+ lid domain JT746_26910 PF00004 ATPase family associated with various cellular activities (AAA) JT746_26915 PF00565 Staphylococcal nuclease homologue JT746_26940 PF00437 Type II/IV secretion system protein JT746_26950 PF03743 Bacterial conjugation TrbI-like protein JT746_26980 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JT746_27055 PF00684 DnaJ central domain JT746_27055 PF00226 DnaJ domain JT746_27055 PF01556 DnaJ C terminal domain JT746_27065 PF01051 Initiator Replication protein JT746_27095 PF13614 AAA domain JT746_27100 PF02796 Helix-turn-helix domain of resolvase JT746_27100 PF00239 Resolvase, N terminal domain JT746_27105 PF01610 Transposase JT746_27105 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JT746_27105 PF13542 Helix-turn-helix domain of transposase family ISL3 JT746_27115 PF13610 DDE domain JT746_27125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JT746_27130 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JT746_27140 PF00753 Metallo-beta-lactamase superfamily JT746_27145 PF05598 Transposase domain (DUF772) JT746_27145 PF01609 Transposase DDE domain JT746_27150 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) JT746_27165 PF13614 AAA domain JT746_27170 PF01815 Rop protein