locus-tag class description FIV03_00005 PF11638 DnaA N-terminal domain FIV03_00005 PF00308 Bacterial dnaA protein FIV03_00005 PF08299 Bacterial dnaA protein helix-turn-helix FIV03_00015 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus FIV03_00015 PF05175 Methyltransferase small domain FIV03_00020 PF02586 SOS response associated peptidase (SRAP) FIV03_00030 PF00293 NUDIX domain FIV03_00070 PF16385 Domain of unknown function FIV03_00070 PF00884 Sulfatase FIV03_00120 PF08241 Methyltransferase domain FIV03_00125 PF17874 MalT-like TPR region FIV03_00125 PF00196 Bacterial regulatory proteins, luxR family FIV03_00130 PF01494 FAD binding domain FIV03_00140 PF01042 Endoribonuclease L-PSP FIV03_00145 PF01266 FAD dependent oxidoreductase FIV03_00150 PF00850 Histone deacetylase domain FIV03_00160 PF05853 beta-keto acid cleavage enzyme FIV03_00165 PF00202 Aminotransferase class-III FIV03_00170 PF00005 ABC transporter FIV03_00170 PF08402 TOBE domain FIV03_00180 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_00185 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_00190 PF03466 LysR substrate binding domain FIV03_00190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_00200 PF00691 OmpA family FIV03_00200 PF05736 OprF membrane domain FIV03_00225 PF01979 Amidohydrolase family FIV03_00235 PF01966 HD domain FIV03_00255 PF00501 AMP-binding enzyme FIV03_00255 PF13193 AMP-binding enzyme C-terminal domain FIV03_00265 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_00275 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_00280 PF00392 Bacterial regulatory proteins, gntR family FIV03_00280 PF07729 FCD domain FIV03_00285 PF01965 DJ-1/PfpI family FIV03_00285 PF12833 Helix-turn-helix domain FIV03_00295 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FIV03_00295 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FIV03_00300 PF02910 Fumarate reductase flavoprotein C-term FIV03_00300 PF00890 FAD binding domain FIV03_00305 PF02445 Quinolinate synthetase A protein FIV03_00315 PF02092 Glycyl-tRNA synthetase beta subunit FIV03_00315 PF05746 DALR anticodon binding domain FIV03_00320 PF03707 Bacterial signalling protein N terminal repeat FIV03_00320 PF13188 PAS domain FIV03_00320 PF00990 Diguanylate cyclase, GGDEF domain FIV03_00320 PF00563 EAL domain FIV03_00325 PF03616 Sodium/glutamate symporter FIV03_00335 PF04011 LemA family FIV03_00345 PF02091 Glycyl-tRNA synthetase alpha subunit FIV03_00360 PF06965 Na+/H+ antiporter 1 FIV03_00360 PF01343 Peptidase family S49 FIV03_00370 PF03167 Uracil DNA glycosylase superfamily FIV03_00385 PF00270 DEAD/DEAH box helicase FIV03_00385 PF00271 Helicase conserved C-terminal domain FIV03_00390 PF07995 Glucose / Sorbosone dehydrogenase FIV03_00395 PF01817 Chorismate mutase type II FIV03_00395 PF02153 Prephenate dehydrogenase FIV03_00400 PF00390 Malic enzyme, N-terminal domain FIV03_00400 PF03949 Malic enzyme, NAD binding domain FIV03_00400 PF01515 Phosphate acetyl/butaryl transferase FIV03_00410 PF00155 Aminotransferase class I and II FIV03_00415 PF00994 Probable molybdopterin binding domain FIV03_00430 PF04055 Radical SAM superfamily FIV03_00435 PF01351 Ribonuclease HII FIV03_00440 PF00430 ATP synthase B/B' CF(0) FIV03_00445 PF00430 ATP synthase B/B' CF(0) FIV03_00450 PF00137 ATP synthase subunit C FIV03_00455 PF00119 ATP synthase A chain FIV03_00460 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FIV03_00465 PF02463 RecF/RecN/SMC N terminal domain FIV03_00480 PF10576 Iron-sulfur binding domain of endonuclease III FIV03_00480 PF00633 Helix-hairpin-helix motif FIV03_00480 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV03_00480 PF14815 NUDIX domain FIV03_00485 PF13640 2OG-Fe(II) oxygenase superfamily FIV03_00485 PF18331 PKHD-type hydroxylase C-terminal domain FIV03_00490 PF00210 Ferritin-like domain FIV03_00495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_00495 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_00500 PF01048 Phosphorylase superfamily FIV03_00500 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FIV03_00510 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_00520 PF01555 DNA methylase FIV03_00520 PF18755 Restriction Enzyme Adenine Methylase Associated FIV03_00525 PF00990 Diguanylate cyclase, GGDEF domain FIV03_00525 PF03707 Bacterial signalling protein N terminal repeat FIV03_00525 PF13188 PAS domain FIV03_00525 PF00563 EAL domain FIV03_00535 PF02954 Bacterial regulatory protein, Fis family FIV03_00535 PF02954 Bacterial regulatory protein, Fis family FIV03_00540 PF00171 Aldehyde dehydrogenase family FIV03_00545 PF12697 Alpha/beta hydrolase family FIV03_00550 PF01638 HxlR-like helix-turn-helix FIV03_00555 PF14497 Glutathione S-transferase, C-terminal domain FIV03_00555 PF02798 Glutathione S-transferase, N-terminal domain FIV03_00565 PF01361 Tautomerase enzyme FIV03_00575 PF00579 tRNA synthetases class I (W and Y) FIV03_00605 PF01209 ubiE/COQ5 methyltransferase family FIV03_00610 PF00266 Aminotransferase class-V FIV03_00615 PF02347 Glycine cleavage system P-protein FIV03_00625 PF01597 Glycine cleavage H-protein FIV03_00630 PF01571 Aminomethyltransferase folate-binding domain FIV03_00630 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV03_00640 PF02401 LytB protein FIV03_00645 PF01636 Phosphotransferase enzyme family FIV03_00650 PF00075 RNase H FIV03_00655 PF00781 Diacylglycerol kinase catalytic domain FIV03_00660 PF00563 EAL domain FIV03_00660 PF00990 Diguanylate cyclase, GGDEF domain FIV03_00660 PF03707 Bacterial signalling protein N terminal repeat FIV03_00665 PF13302 Acetyltransferase (GNAT) domain FIV03_00670 PF05193 Peptidase M16 inactive domain FIV03_00670 PF00675 Insulinase (Peptidase family M16) FIV03_00675 PF14821 Threonine synthase N terminus FIV03_00675 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_00680 PF02622 Uncharacterized ACR, COG1678 FIV03_00690 PF08534 Redoxin FIV03_00690 PF00462 Glutaredoxin FIV03_00695 PF02104 SURF1 family FIV03_00705 PF00510 Cytochrome c oxidase subunit III FIV03_00710 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FIV03_00720 PF01040 UbiA prenyltransferase family FIV03_00725 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV03_00730 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FIV03_00730 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIV03_00740 PF02254 TrkA-N domain FIV03_00740 PF00999 Sodium/hydrogen exchanger family FIV03_00750 PF13419 Haloacid dehalogenase-like hydrolase FIV03_00755 PF01523 Putative modulator of DNA gyrase FIV03_00765 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FIV03_00770 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FIV03_00785 PF00459 Inositol monophosphatase family FIV03_00790 PF01523 Putative modulator of DNA gyrase FIV03_00800 PF01040 UbiA prenyltransferase family FIV03_00805 PF02843 Phosphoribosylglycinamide synthetase, C domain FIV03_00805 PF02844 Phosphoribosylglycinamide synthetase, N domain FIV03_00805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FIV03_00810 PF00561 alpha/beta hydrolase fold FIV03_00815 PF00990 Diguanylate cyclase, GGDEF domain FIV03_00815 PF08448 PAS fold FIV03_00815 PF08447 PAS fold FIV03_00815 PF00563 EAL domain FIV03_00820 PF01734 Patatin-like phospholipase FIV03_00840 PF01479 S4 domain FIV03_00840 PF00849 RNA pseudouridylate synthase FIV03_00845 PF14437 MafB19-like deaminase FIV03_00850 PF02530 Porin subfamily FIV03_00855 PF12146 Serine aminopeptidase, S33 FIV03_00860 PF01119 DNA mismatch repair protein, C-terminal domain FIV03_00860 PF08676 MutL C terminal dimerisation domain FIV03_00870 PF00440 Bacterial regulatory proteins, tetR family FIV03_00880 PF00873 AcrB/AcrD/AcrF family FIV03_00890 PF00072 Response regulator receiver domain FIV03_00895 PF01575 MaoC like domain FIV03_00900 PF06574 FAD synthetase FIV03_00900 PF01687 Riboflavin kinase FIV03_00915 PF08264 Anticodon-binding domain of tRNA FIV03_00915 PF00133 tRNA synthetases class I (I, L, M and V) FIV03_00920 PF01252 Signal peptidase (SPase) II FIV03_00930 PF05193 Peptidase M16 inactive domain FIV03_00930 PF00675 Insulinase (Peptidase family M16) FIV03_00935 PF05193 Peptidase M16 inactive domain FIV03_00955 PF02954 Bacterial regulatory protein, Fis family FIV03_00955 PF00158 Sigma-54 interaction domain FIV03_00955 PF00072 Response regulator receiver domain FIV03_00965 PF00166 Chaperonin 10 Kd subunit FIV03_00970 PF00118 TCP-1/cpn60 chaperonin family FIV03_00990 PF02798 Glutathione S-transferase, N-terminal domain FIV03_00990 PF00043 Glutathione S-transferase, C-terminal domain FIV03_00995 PF04102 SlyX FIV03_01005 PF02687 FtsX-like permease family FIV03_01005 PF12704 MacB-like periplasmic core domain FIV03_01005 PF00005 ABC transporter FIV03_01010 PF00005 ABC transporter FIV03_01025 PF03061 Thioesterase superfamily FIV03_01040 PF02082 Transcriptional regulator FIV03_01045 PF13545 Crp-like helix-turn-helix domain FIV03_01045 PF00027 Cyclic nucleotide-binding domain FIV03_01055 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FIV03_01060 PF00535 Glycosyl transferase family 2 FIV03_01060 PF00795 Carbon-nitrogen hydrolase FIV03_01065 PF03129 Anticodon binding domain FIV03_01065 PF13393 Histidyl-tRNA synthetase FIV03_01070 PF13393 Histidyl-tRNA synthetase FIV03_01075 PF01634 ATP phosphoribosyltransferase FIV03_01080 PF03352 Methyladenine glycosylase FIV03_01095 PF17969 L,D-transpeptidase C-terminal domain FIV03_01095 PF03734 L,D-transpeptidase catalytic domain FIV03_01100 PF00654 Voltage gated chloride channel FIV03_01105 PF13183 4Fe-4S dicluster domain FIV03_01105 PF02754 Cysteine-rich domain FIV03_01120 PF02913 FAD linked oxidases, C-terminal domain FIV03_01120 PF01565 FAD binding domain FIV03_01125 PF02913 FAD linked oxidases, C-terminal domain FIV03_01125 PF01565 FAD binding domain FIV03_01130 PF03466 LysR substrate binding domain FIV03_01130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_01135 PF00034 Cytochrome c FIV03_01145 PF07690 Major Facilitator Superfamily FIV03_01160 PF00392 Bacterial regulatory proteins, gntR family FIV03_01160 PF07729 FCD domain FIV03_01165 PF01070 FMN-dependent dehydrogenase FIV03_01170 PF12833 Helix-turn-helix domain FIV03_01170 PF01965 DJ-1/PfpI family FIV03_01175 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_01180 PF00117 Glutamine amidotransferase class-I FIV03_01190 PF03466 LysR substrate binding domain FIV03_01190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_01195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_01195 PF03466 LysR substrate binding domain FIV03_01210 PF04107 Glutamate-cysteine ligase family 2(GCS2) FIV03_01215 PF04452 RNA methyltransferase FIV03_01220 PF02601 Exonuclease VII, large subunit FIV03_01220 PF13742 OB-fold nucleic acid binding domain FIV03_01230 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_01250 PF02954 Bacterial regulatory protein, Fis family FIV03_01250 PF00072 Response regulator receiver domain FIV03_01250 PF00158 Sigma-54 interaction domain FIV03_01255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_01255 PF00512 His Kinase A (phospho-acceptor) domain FIV03_01265 PF13380 CoA binding domain FIV03_01265 PF00583 Acetyltransferase (GNAT) family FIV03_01265 PF13607 Succinyl-CoA ligase like flavodoxin domain FIV03_01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_01275 PF03466 LysR substrate binding domain FIV03_01280 PF01638 HxlR-like helix-turn-helix FIV03_01305 PF12794 Mechanosensitive ion channel inner membrane domain 1 FIV03_01305 PF12795 Mechanosensitive ion channel porin domain FIV03_01305 PF00924 Mechanosensitive ion channel FIV03_01315 PF00576 HIUase/Transthyretin family FIV03_01325 PF04115 Ureidoglycolate lyase FIV03_01330 PF00860 Permease family FIV03_01340 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV03_01340 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV03_01345 PF02423 Ornithine cyclodeaminase/mu-crystallin family FIV03_01355 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_01360 PF00266 Aminotransferase class-V FIV03_01365 PF01614 Bacterial transcriptional regulator FIV03_01365 PF09339 IclR helix-turn-helix domain FIV03_01370 PF07883 Cupin domain FIV03_01370 PF05899 Protein of unknown function (DUF861) FIV03_01375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_01375 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_01375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_01380 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_01390 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_01395 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_01395 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_01395 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_01420 PF01925 Sulfite exporter TauE/SafE FIV03_01430 PF02678 Pirin FIV03_01430 PF17954 Quercetinase C-terminal cupin domain FIV03_01435 PF14542 GCN5-related N-acetyl-transferase FIV03_01450 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA FIV03_01455 PF02805 Metal binding domain of Ada FIV03_01455 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV03_01455 PF12833 Helix-turn-helix domain FIV03_01455 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV03_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_01545 PF00512 His Kinase A (phospho-acceptor) domain FIV03_01545 PF00512 His Kinase A (phospho-acceptor) domain FIV03_01545 PF00989 PAS fold FIV03_01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_01545 PF13188 PAS domain FIV03_01545 PF00989 PAS fold FIV03_01545 PF13188 PAS domain FIV03_01555 PF13416 Bacterial extracellular solute-binding protein FIV03_01560 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_01565 PF17862 AAA+ lid domain FIV03_01565 PF06480 FtsH Extracellular FIV03_01565 PF01434 Peptidase family M41 FIV03_01565 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_01570 PF03707 Bacterial signalling protein N terminal repeat FIV03_01570 PF00990 Diguanylate cyclase, GGDEF domain FIV03_01570 PF00563 EAL domain FIV03_01575 PF01144 Coenzyme A transferase FIV03_01580 PF01144 Coenzyme A transferase FIV03_01600 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_01605 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_01610 PF00005 ABC transporter FIV03_01610 PF08402 TOBE domain FIV03_01615 PF13416 Bacterial extracellular solute-binding protein FIV03_01620 PF00120 Glutamine synthetase, catalytic domain FIV03_01630 PF00120 Glutamine synthetase, catalytic domain FIV03_01635 PF00202 Aminotransferase class-III FIV03_01645 PF03795 YCII-related domain FIV03_01650 PF08281 Sigma-70, region 4 FIV03_01650 PF04542 Sigma-70 region 2 FIV03_01675 PF17151 Periplasmic sensor domain FIV03_01675 PF00990 Diguanylate cyclase, GGDEF domain FIV03_01690 PF01507 Phosphoadenosine phosphosulfate reductase family FIV03_01695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV03_01695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV03_01705 PF14824 Sirohaem biosynthesis protein central FIV03_01705 PF10414 Sirohaem synthase dimerisation region FIV03_01705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_01725 PF02803 Thiolase, C-terminal domain FIV03_01725 PF00108 Thiolase, N-terminal domain FIV03_01730 PF00128 Alpha amylase, catalytic domain FIV03_01735 PF00535 Glycosyl transferase family 2 FIV03_01740 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_01740 PF00672 HAMP domain FIV03_01745 PF00171 Aldehyde dehydrogenase family FIV03_01750 PF05199 GMC oxidoreductase FIV03_01750 PF00732 GMC oxidoreductase FIV03_01755 PF13977 BetI-type transcriptional repressor, C-terminal FIV03_01755 PF00440 Bacterial regulatory proteins, tetR family FIV03_01760 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FIV03_01765 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_01770 PF00571 CBS domain FIV03_01770 PF00005 ABC transporter FIV03_01775 PF00313 'Cold-shock' DNA-binding domain FIV03_01785 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FIV03_01790 PF04324 BFD-like [2Fe-2S] binding domain FIV03_01790 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_01805 PF02082 Transcriptional regulator FIV03_01810 PF00356 Bacterial regulatory proteins, lacI family FIV03_01820 PF13458 Periplasmic binding protein FIV03_01825 PF11862 Domain of unknown function (DUF3382) FIV03_01825 PF02653 Branched-chain amino acid transport system / permease component FIV03_01830 PF02653 Branched-chain amino acid transport system / permease component FIV03_01835 PF00005 ABC transporter FIV03_01840 PF00005 ABC transporter FIV03_01840 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_01845 PF04199 Putative cyclase FIV03_01850 PF00563 EAL domain FIV03_01850 PF00990 Diguanylate cyclase, GGDEF domain FIV03_01850 PF13188 PAS domain FIV03_01850 PF03707 Bacterial signalling protein N terminal repeat FIV03_01855 PF00266 Aminotransferase class-V FIV03_01860 PF03315 Serine dehydratase beta chain FIV03_01860 PF03313 Serine dehydratase alpha chain FIV03_01870 PF00392 Bacterial regulatory proteins, gntR family FIV03_01870 PF07729 FCD domain FIV03_01875 PF03702 Anhydro-N-acetylmuramic acid kinase FIV03_01880 PF00202 Aminotransferase class-III FIV03_01900 PF13545 Crp-like helix-turn-helix domain FIV03_01900 PF00027 Cyclic nucleotide-binding domain FIV03_01915 PF00313 'Cold-shock' DNA-binding domain FIV03_01940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_01940 PF00512 His Kinase A (phospho-acceptor) domain FIV03_01940 PF00989 PAS fold FIV03_01945 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_01945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_01945 PF00403 Heavy-metal-associated domain FIV03_01950 PF09335 SNARE associated Golgi protein FIV03_01955 PF00825 Ribonuclease P FIV03_01960 PF14849 YidC periplasmic domain FIV03_01960 PF02096 60Kd inner membrane protein FIV03_01970 PF17092 Penicillin-binding protein OB-like domain FIV03_01970 PF00912 Transglycosylase FIV03_01970 PF00905 Penicillin binding protein transpeptidase domain FIV03_01975 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_01980 PF01926 50S ribosome-binding GTPase FIV03_01985 PF00696 Amino acid kinase family FIV03_01995 PF05675 Protein of unknown function (DUF817) FIV03_02000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_02000 PF03466 LysR substrate binding domain FIV03_02010 PF00108 Thiolase, N-terminal domain FIV03_02010 PF02803 Thiolase, C-terminal domain FIV03_02015 PF01144 Coenzyme A transferase FIV03_02020 PF01144 Coenzyme A transferase FIV03_02025 PF01614 Bacterial transcriptional regulator FIV03_02025 PF09339 IclR helix-turn-helix domain FIV03_02030 PF01370 NAD dependent epimerase/dehydratase family FIV03_02030 PF08338 Domain of unknown function (DUF1731) FIV03_02060 PF01263 Aldose 1-epimerase FIV03_02065 PF02653 Branched-chain amino acid transport system / permease component FIV03_02070 PF00005 ABC transporter FIV03_02075 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV03_02080 PF00392 Bacterial regulatory proteins, gntR family FIV03_02080 PF07729 FCD domain FIV03_02085 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_02085 PF13378 Enolase C-terminal domain-like FIV03_02090 PF00360 Phytochrome region FIV03_02090 PF00990 Diguanylate cyclase, GGDEF domain FIV03_02090 PF01590 GAF domain FIV03_02090 PF00563 EAL domain FIV03_02100 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_02100 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FIV03_02100 PF14602 Hexapeptide repeat of succinyl-transferase FIV03_02110 PF01546 Peptidase family M20/M25/M40 FIV03_02110 PF07687 Peptidase dimerisation domain FIV03_02120 PF00924 Mechanosensitive ion channel FIV03_02130 PF01416 tRNA pseudouridine synthase FIV03_02140 PF00551 Formyl transferase FIV03_02140 PF02911 Formyl transferase, C-terminal domain FIV03_02145 PF01914 MarC family integral membrane protein FIV03_02150 PF01327 Polypeptide deformylase FIV03_02155 PF02646 RmuC family FIV03_02165 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain FIV03_02165 PF00877 NlpC/P60 family FIV03_02175 PF02789 Cytosol aminopeptidase family, N-terminal domain FIV03_02175 PF00883 Cytosol aminopeptidase family, catalytic domain FIV03_02200 PF00437 Type II/IV secretion system protein FIV03_02215 PF00263 Bacterial type II and III secretion system protein FIV03_02215 PF04972 BON domain FIV03_02215 PF13629 Pilus formation protein N terminal region FIV03_02250 PF01515 Phosphate acetyl/butaryl transferase FIV03_02255 PF00871 Acetokinase family FIV03_02265 PF13419 Haloacid dehalogenase-like hydrolase FIV03_02270 PF00850 Histone deacetylase domain FIV03_02280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV03_02280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV03_02280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV03_02280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV03_02290 PF00294 pfkB family carbohydrate kinase FIV03_02310 PF00962 Adenosine/AMP deaminase FIV03_02315 PF01676 Metalloenzyme superfamily FIV03_02320 PF02885 Glycosyl transferase family, helical bundle domain FIV03_02320 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FIV03_02320 PF00591 Glycosyl transferase family, a/b domain FIV03_02325 PF01791 DeoC/LacD family aldolase FIV03_02330 PF01048 Phosphorylase superfamily FIV03_02335 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV03_02365 PF04198 Putative sugar-binding domain FIV03_02375 PF02142 MGS-like domain FIV03_02380 PF02685 Glucokinase FIV03_02385 PF08482 ATP-dependent helicase C-terminal FIV03_02385 PF00271 Helicase conserved C-terminal domain FIV03_02385 PF04408 Helicase associated domain (HA2) FIV03_02385 PF00270 DEAD/DEAH box helicase FIV03_02395 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FIV03_02395 PF14850 DNA-binding domain of Proline dehydrogenase FIV03_02395 PF00171 Aldehyde dehydrogenase family FIV03_02395 PF01619 Proline dehydrogenase FIV03_02400 PF01037 Lrp/AsnC ligand binding domain FIV03_02405 PF13416 Bacterial extracellular solute-binding protein FIV03_02410 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_02415 PF00005 ABC transporter FIV03_02420 PF00210 Ferritin-like domain FIV03_02435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_02440 PF10672 S-adenosylmethionine-dependent methyltransferase FIV03_02440 PF17785 PUA-like domain FIV03_02445 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV03_02445 PF00588 SpoU rRNA Methylase family FIV03_02455 PF00578 AhpC/TSA family FIV03_02455 PF10417 C-terminal domain of 1-Cys peroxiredoxin FIV03_02465 PF00313 'Cold-shock' DNA-binding domain FIV03_02475 PF02310 B12 binding domain FIV03_02475 PF04055 Radical SAM superfamily FIV03_02475 PF13282 Domain of unknown function (DUF4070) FIV03_02480 PF07690 Major Facilitator Superfamily FIV03_02485 PF02230 Phospholipase/Carboxylesterase FIV03_02495 PF05343 M42 glutamyl aminopeptidase FIV03_02510 PF03411 Penicillin-insensitive murein endopeptidase FIV03_02520 PF06421 GTP-binding protein LepA C-terminus FIV03_02520 PF00679 Elongation factor G C-terminus FIV03_02520 PF03144 Elongation factor Tu domain 2 FIV03_02520 PF00009 Elongation factor Tu GTP binding domain FIV03_02525 PF03831 PhnA domain FIV03_02525 PF08274 PhnA Zinc-Ribbon FIV03_02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_02530 PF03466 LysR substrate binding domain FIV03_02535 PF14552 Tautomerase enzyme FIV03_02545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_02545 PF03466 LysR substrate binding domain FIV03_02550 PF03631 Virulence factor BrkB FIV03_02555 PF01409 tRNA synthetases class II core domain (F) FIV03_02555 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FIV03_02565 PF03483 B3/4 domain FIV03_02565 PF03484 tRNA synthetase B5 domain FIV03_02565 PF03147 Ferredoxin-fold anticodon binding domain FIV03_02565 PF01588 Putative tRNA binding domain FIV03_02565 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FIV03_02605 PF04715 Anthranilate synthase component I, N terminal region FIV03_02605 PF00425 chorismate binding enzyme FIV03_02620 PF01625 Peptide methionine sulfoxide reductase FIV03_02635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_02635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_02640 PF08659 KR domain FIV03_02640 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_02640 PF16197 Ketoacyl-synthetase C-terminal extension FIV03_02640 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_02640 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_02640 PF00698 Acyl transferase domain FIV03_02640 PF14765 Polyketide synthase dehydratase FIV03_02640 PF00550 Phosphopantetheine attachment site FIV03_02645 PF00108 Thiolase, N-terminal domain FIV03_02645 PF02803 Thiolase, C-terminal domain FIV03_02660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_02660 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_02660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_02665 PF13193 AMP-binding enzyme C-terminal domain FIV03_02665 PF00501 AMP-binding enzyme FIV03_02680 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_02685 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_02690 PF13411 MerR HTH family regulatory protein FIV03_02695 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV03_02695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_02705 PF00561 alpha/beta hydrolase fold FIV03_02715 PF16925 Tetracyclin repressor-like, C-terminal domain FIV03_02715 PF00440 Bacterial regulatory proteins, tetR family FIV03_02725 PF07729 FCD domain FIV03_02725 PF00392 Bacterial regulatory proteins, gntR family FIV03_02730 PF00694 Aconitase C-terminal domain FIV03_02730 PF00330 Aconitase family (aconitate hydratase) FIV03_02735 PF05145 Transition state regulatory protein AbrB FIV03_02740 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_02755 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_02770 PF00465 Iron-containing alcohol dehydrogenase FIV03_02780 PF01618 MotA/TolQ/ExbB proton channel family FIV03_02785 PF02472 Biopolymer transport protein ExbD/TolR FIV03_02800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV03_02800 PF12833 Helix-turn-helix domain FIV03_02800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV03_02800 PF02805 Metal binding domain of Ada FIV03_02810 PF02548 Ketopantoate hydroxymethyltransferase FIV03_02815 PF02569 Pantoate-beta-alanine ligase FIV03_02840 PF03552 Cellulose synthase FIV03_02840 PF07238 PilZ domain FIV03_02840 PF00535 Glycosyl transferase family 2 FIV03_02860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_02860 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_02860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_02865 PF02515 CoA-transferase family III FIV03_02890 PF04143 Sulphur transport FIV03_02905 PF00990 Diguanylate cyclase, GGDEF domain FIV03_02915 PF00011 Hsp20/alpha crystallin family FIV03_02920 PF03466 LysR substrate binding domain FIV03_02920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_02935 PF08281 Sigma-70, region 4 FIV03_02935 PF04542 Sigma-70 region 2 FIV03_02950 PF08713 DNA alkylation repair enzyme FIV03_02955 PF00005 ABC transporter FIV03_02955 PF08402 TOBE domain FIV03_02960 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_02965 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_02970 PF13416 Bacterial extracellular solute-binding protein FIV03_02995 PF01336 OB-fold nucleic acid binding domain FIV03_02995 PF02811 PHP domain FIV03_02995 PF14579 Helix-hairpin-helix motif FIV03_02995 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV03_02995 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV03_03005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_03015 PF14579 Helix-hairpin-helix motif FIV03_03015 PF01336 OB-fold nucleic acid binding domain FIV03_03015 PF02811 PHP domain FIV03_03015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV03_03015 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV03_03025 PF00248 Aldo/keto reductase family FIV03_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_03075 PF03466 LysR substrate binding domain FIV03_03080 PF07690 Major Facilitator Superfamily FIV03_03085 PF00248 Aldo/keto reductase family FIV03_03095 PF00392 Bacterial regulatory proteins, gntR family FIV03_03095 PF07729 FCD domain FIV03_03100 PF07690 Major Facilitator Superfamily FIV03_03120 PF01979 Amidohydrolase family FIV03_03120 PF13382 Adenine deaminase C-terminal domain FIV03_03135 PF00296 Luciferase-like monooxygenase FIV03_03140 PF01613 Flavin reductase like domain FIV03_03150 PF03738 Glutathionylspermidine synthase preATP-grasp FIV03_03155 PF04012 PspA/IM30 family FIV03_03160 PF09938 Uncharacterized protein conserved in bacteria (DUF2170) FIV03_03175 PF03994 Domain of Unknown Function (DUF350) FIV03_03185 PF00255 Glutathione peroxidase FIV03_03190 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FIV03_03195 PF02627 Carboxymuconolactone decarboxylase family FIV03_03200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_03200 PF03466 LysR substrate binding domain FIV03_03205 PF00892 EamA-like transporter family FIV03_03210 PF07676 WD40-like Beta Propeller Repeat FIV03_03215 PF00356 Bacterial regulatory proteins, lacI family FIV03_03220 PF03009 Glycerophosphoryl diester phosphodiesterase family FIV03_03225 PF17912 MalK OB fold domain FIV03_03225 PF00005 ABC transporter FIV03_03230 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_03290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV03_03295 PF02224 Cytidylate kinase FIV03_03300 PF00575 S1 RNA binding domain FIV03_03310 PF01494 FAD binding domain FIV03_03310 PF07976 Phenol hydroxylase, C-terminal dimerisation domain FIV03_03330 PF00005 ABC transporter FIV03_03335 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_03340 PF01979 Amidohydrolase family FIV03_03350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV03_03355 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_03360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_03370 PF01380 SIS domain FIV03_03370 PF02685 Glucokinase FIV03_03370 PF01418 Helix-turn-helix domain, rpiR family FIV03_03375 PF01343 Peptidase family S49 FIV03_03380 PF00216 Bacterial DNA-binding protein FIV03_03400 PF03458 UPF0126 domain FIV03_03405 PF01025 GrpE FIV03_03410 PF00085 Thioredoxin FIV03_03415 PF13361 UvrD-like helicase C-terminal domain FIV03_03415 PF00580 UvrD/REP helicase N-terminal domain FIV03_03420 PF12705 PD-(D/E)XK nuclease superfamily FIV03_03425 PF12804 MobA-like NTP transferase domain FIV03_03430 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FIV03_03435 PF00512 His Kinase A (phospho-acceptor) domain FIV03_03435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_03440 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FIV03_03440 PF05221 S-adenosyl-L-homocysteine hydrolase FIV03_03450 PF00381 PTS HPr component phosphorylation site FIV03_03455 PF03830 PTS system sorbose subfamily IIB component FIV03_03455 PF03610 PTS system fructose IIA component FIV03_03465 PF13756 Stimulus-sensing domain FIV03_03465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_03465 PF00512 His Kinase A (phospho-acceptor) domain FIV03_03465 PF13755 Sensor N-terminal transmembrane domain FIV03_03465 PF00672 HAMP domain FIV03_03470 PF00486 Transcriptional regulatory protein, C terminal FIV03_03470 PF00072 Response regulator receiver domain FIV03_03475 PF01293 Phosphoenolpyruvate carboxykinase FIV03_03485 PF01810 LysE type translocator FIV03_03490 PF02625 XdhC and CoxI family FIV03_03490 PF13478 XdhC Rossmann domain FIV03_03495 PF12804 MobA-like NTP transferase domain FIV03_03495 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_03505 PF03707 Bacterial signalling protein N terminal repeat FIV03_03505 PF00990 Diguanylate cyclase, GGDEF domain FIV03_03505 PF00563 EAL domain FIV03_03510 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FIV03_03515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_03515 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV03_03520 PF00231 ATP synthase FIV03_03525 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV03_03525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_03525 PF00306 ATP synthase alpha/beta chain, C terminal domain FIV03_03530 PF00213 ATP synthase delta (OSCP) subunit FIV03_03535 PF18074 Primosomal protein N C-terminal domain FIV03_03535 PF17764 3′ DNA-binding domain (3′BD) FIV03_03535 PF00270 DEAD/DEAH box helicase FIV03_03535 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FIV03_03540 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV03_03545 PF00589 Phage integrase family FIV03_03545 PF02899 Phage integrase, N-terminal SAM-like domain FIV03_03575 PF13411 MerR HTH family regulatory protein FIV03_03590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_03590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_03605 PF01810 LysE type translocator FIV03_03610 PF02817 e3 binding domain FIV03_03610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV03_03610 PF00364 Biotin-requiring enzyme FIV03_03615 PF16078 2-oxoglutarate dehydrogenase N-terminus FIV03_03615 PF02779 Transketolase, pyrimidine binding domain FIV03_03615 PF00676 Dehydrogenase E1 component FIV03_03615 PF16870 2-oxoglutarate dehydrogenase C-terminal FIV03_03620 PF02629 CoA binding domain FIV03_03620 PF00549 CoA-ligase FIV03_03630 PF00549 CoA-ligase FIV03_03630 PF08442 ATP-grasp domain FIV03_03635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FIV03_03635 PF00056 lactate/malate dehydrogenase, NAD binding domain FIV03_03640 PF03969 AFG1-like ATPase FIV03_03645 PF04229 GrpB protein FIV03_03675 PF16124 RecQ zinc-binding FIV03_03675 PF00570 HRDC domain FIV03_03675 PF00271 Helicase conserved C-terminal domain FIV03_03675 PF09382 RQC domain FIV03_03675 PF00270 DEAD/DEAH box helicase FIV03_03685 PF01625 Peptide methionine sulfoxide reductase FIV03_03700 PF06123 Inner membrane protein CreD FIV03_03710 PF13847 Methyltransferase domain FIV03_03715 PF13237 4Fe-4S dicluster domain FIV03_03715 PF13085 2Fe-2S iron-sulfur cluster binding domain FIV03_03725 PF00890 FAD binding domain FIV03_03725 PF02910 Fumarate reductase flavoprotein C-term FIV03_03735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FIV03_03740 PF04960 Glutaminase FIV03_03755 PF02132 RecR protein FIV03_03755 PF13662 Toprim domain FIV03_03760 PF02575 YbaB/EbfC DNA-binding family FIV03_03765 PF12169 DNA polymerase III subunits gamma and tau domain III FIV03_03800 PF09297 NADH pyrophosphatase zinc ribbon domain FIV03_03800 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FIV03_03800 PF00293 NUDIX domain FIV03_03815 PF00916 Sulfate permease family FIV03_03815 PF01740 STAS domain FIV03_03830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_03830 PF00005 ABC transporter FIV03_03835 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_03835 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_03840 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_03845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_03850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_03855 PF00990 Diguanylate cyclase, GGDEF domain FIV03_03855 PF03707 Bacterial signalling protein N terminal repeat FIV03_03855 PF00563 EAL domain FIV03_03860 PF00034 Cytochrome c FIV03_03865 PF02348 Cytidylyltransferase FIV03_03870 PF00800 Prephenate dehydratase FIV03_03870 PF01817 Chorismate mutase type II FIV03_03870 PF01842 ACT domain FIV03_03875 PF00294 pfkB family carbohydrate kinase FIV03_03880 PF01425 Amidase FIV03_03885 PF00282 Pyridoxal-dependent decarboxylase conserved domain FIV03_03895 PF00106 short chain dehydrogenase FIV03_03910 PF07995 Glucose / Sorbosone dehydrogenase FIV03_03915 PF03466 LysR substrate binding domain FIV03_03915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_03935 PF00873 AcrB/AcrD/AcrF family FIV03_03940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_03940 PF00529 HlyD membrane-fusion protein of T1SS FIV03_03950 PF00561 alpha/beta hydrolase fold FIV03_03960 PF00561 alpha/beta hydrolase fold FIV03_03965 PF00072 Response regulator receiver domain FIV03_03965 PF00196 Bacterial regulatory proteins, luxR family FIV03_03970 PF00072 Response regulator receiver domain FIV03_03970 PF00196 Bacterial regulatory proteins, luxR family FIV03_03975 PF13493 Domain of unknown function (DUF4118) FIV03_03975 PF00989 PAS fold FIV03_03975 PF13426 PAS domain FIV03_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_03975 PF08447 PAS fold FIV03_03975 PF00512 His Kinase A (phospho-acceptor) domain FIV03_03980 PF00561 alpha/beta hydrolase fold FIV03_03995 PF01799 [2Fe-2S] binding domain FIV03_03995 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_04020 PF00072 Response regulator receiver domain FIV03_04020 PF00196 Bacterial regulatory proteins, luxR family FIV03_04025 PF04011 LemA family FIV03_04050 PF00092 von Willebrand factor type A domain FIV03_04060 PF00300 Histidine phosphatase superfamily (branch 1) FIV03_04065 PF05173 Dihydrodipicolinate reductase, C-terminus FIV03_04065 PF01113 Dihydrodipicolinate reductase, N-terminus FIV03_04070 PF00990 Diguanylate cyclase, GGDEF domain FIV03_04070 PF03707 Bacterial signalling protein N terminal repeat FIV03_04070 PF00563 EAL domain FIV03_04070 PF13188 PAS domain FIV03_04075 PF00575 S1 RNA binding domain FIV03_04075 PF01138 3' exoribonuclease family, domain 1 FIV03_04075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FIV03_04075 PF00013 KH domain FIV03_04075 PF03725 3' exoribonuclease family, domain 2 FIV03_04080 PF00312 Ribosomal protein S15 FIV03_04085 PF01509 TruB family pseudouridylate synthase (N terminal domain) FIV03_04085 PF09157 Pseudouridine synthase II TruB, C-terminal FIV03_04085 PF16198 tRNA pseudouridylate synthase B C-terminal domain FIV03_04090 PF02033 Ribosome-binding factor A FIV03_04095 PF08364 Bacterial translation initiation factor IF-2 associated region FIV03_04095 PF04760 Translation initiation factor IF-2, N-terminal region FIV03_04095 PF11987 Translation-initiation factor 2 FIV03_04095 PF00009 Elongation factor Tu GTP binding domain FIV03_04105 PF08529 NusA N-terminal domain FIV03_04105 PF00575 S1 RNA binding domain FIV03_04105 PF13184 NusA-like KH domain FIV03_04110 PF17384 RimP C-terminal SH3 domain FIV03_04110 PF02576 RimP N-terminal domain FIV03_04115 PF02390 Putative methyltransferase FIV03_04120 PF02773 S-adenosylmethionine synthetase, C-terminal domain FIV03_04120 PF02772 S-adenosylmethionine synthetase, central domain FIV03_04120 PF00438 S-adenosylmethionine synthetase, N-terminal domain FIV03_04125 PF01381 Helix-turn-helix FIV03_04130 PF00795 Carbon-nitrogen hydrolase FIV03_04135 PF00571 CBS domain FIV03_04135 PF03471 Transporter associated domain FIV03_04140 PF02130 Uncharacterized protein family UPF0054 FIV03_04145 PF02562 PhoH-like protein FIV03_04150 PF04055 Radical SAM superfamily FIV03_04150 PF01938 TRAM domain FIV03_04150 PF00919 Uncharacterized protein family UPF0004 FIV03_04160 PF01475 Ferric uptake regulator family FIV03_04170 PF00814 Glycoprotease family FIV03_04185 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_04185 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_04185 PF07724 AAA domain (Cdc48 subfamily) FIV03_04195 PF00227 Proteasome subunit FIV03_04200 PF00890 FAD binding domain FIV03_04200 PF04205 FMN-binding domain FIV03_04200 PF03358 NADPH-dependent FMN reductase FIV03_04205 PF13649 Methyltransferase domain FIV03_04210 PF00684 DnaJ central domain FIV03_04210 PF00226 DnaJ domain FIV03_04210 PF01556 DnaJ C terminal domain FIV03_04215 PF00012 Hsp70 protein FIV03_04225 PF13532 2OG-Fe(II) oxygenase superfamily FIV03_04235 PF00392 Bacterial regulatory proteins, gntR family FIV03_04235 PF07729 FCD domain FIV03_04240 PF03109 ABC1 family FIV03_04245 PF01209 ubiE/COQ5 methyltransferase family FIV03_04250 PF06827 Zinc finger found in FPG and IleRS FIV03_04250 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FIV03_04250 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FIV03_04255 PF00378 Enoyl-CoA hydratase/isomerase FIV03_04260 PF01649 Ribosomal protein S20 FIV03_04265 PF00581 Rhodanese-like domain FIV03_04270 PF11638 DnaA N-terminal domain FIV03_04270 PF08299 Bacterial dnaA protein helix-turn-helix FIV03_04270 PF00308 Bacterial dnaA protein FIV03_04275 PF02767 DNA polymerase III beta subunit, central domain FIV03_04275 PF00712 DNA polymerase III beta subunit, N-terminal domain FIV03_04275 PF02768 DNA polymerase III beta subunit, C-terminal domain FIV03_04280 PF02463 RecF/RecN/SMC N terminal domain FIV03_04285 PF01751 Toprim domain FIV03_04285 PF00204 DNA gyrase B FIV03_04285 PF00986 DNA gyrase B subunit, carboxyl terminus FIV03_04285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_04290 PF03707 Bacterial signalling protein N terminal repeat FIV03_04290 PF00990 Diguanylate cyclase, GGDEF domain FIV03_04290 PF00563 EAL domain FIV03_04295 PF03330 Lytic transglycolase FIV03_04300 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FIV03_04380 PF00589 Phage integrase family FIV03_04380 PF02899 Phage integrase, N-terminal SAM-like domain FIV03_04385 PF16653 Saccharopine dehydrogenase C-terminal domain FIV03_04385 PF03435 Saccharopine dehydrogenase NADP binding domain FIV03_04390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV03_04400 PF00005 ABC transporter FIV03_04400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_04410 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_04415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_04425 PF06253 Trimethylamine methyltransferase (MTTB) FIV03_04430 PF13378 Enolase C-terminal domain-like FIV03_04430 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_04445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_04445 PF03466 LysR substrate binding domain FIV03_04455 PF01266 FAD dependent oxidoreductase FIV03_04460 PF00171 Aldehyde dehydrogenase family FIV03_04465 PF00701 Dihydrodipicolinate synthetase family FIV03_04470 PF00392 Bacterial regulatory proteins, gntR family FIV03_04470 PF07729 FCD domain FIV03_04475 PF12833 Helix-turn-helix domain FIV03_04475 PF01965 DJ-1/PfpI family FIV03_04480 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV03_04480 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV03_04485 PF01370 NAD dependent epimerase/dehydratase family FIV03_04505 PF00355 Rieske [2Fe-2S] domain FIV03_04515 PF03737 Aldolase/RraA FIV03_04530 PF02743 Cache domain FIV03_04530 PF00672 HAMP domain FIV03_04530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_04535 PF01209 ubiE/COQ5 methyltransferase family FIV03_04545 PF13426 PAS domain FIV03_04545 PF07228 Stage II sporulation protein E (SpoIIE) FIV03_04550 PF13581 Histidine kinase-like ATPase domain FIV03_04555 PF01740 STAS domain FIV03_04570 PF00069 Protein kinase domain FIV03_04570 PF03793 PASTA domain FIV03_04575 PF01883 Iron-sulfur cluster assembly protein FIV03_04575 PF10609 NUBPL iron-transfer P-loop NTPase FIV03_04585 PF01321 Creatinase/Prolidase N-terminal domain FIV03_04585 PF00557 Metallopeptidase family M24 FIV03_04590 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_04595 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_04605 PF08402 TOBE domain FIV03_04605 PF00005 ABC transporter FIV03_04610 PF13458 Periplasmic binding protein FIV03_04620 PF00005 ABC transporter FIV03_04625 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_04625 PF00005 ABC transporter FIV03_04630 PF11862 Domain of unknown function (DUF3382) FIV03_04630 PF02653 Branched-chain amino acid transport system / permease component FIV03_04635 PF02653 Branched-chain amino acid transport system / permease component FIV03_04640 PF16868 NMT1-like family FIV03_04645 PF01980 tRNA-methyltransferase O FIV03_04650 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_04650 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_04650 PF00378 Enoyl-CoA hydratase/isomerase FIV03_04660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_04660 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_04660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_04670 PF01575 MaoC like domain FIV03_04680 PF00501 AMP-binding enzyme FIV03_04680 PF13193 AMP-binding enzyme C-terminal domain FIV03_04690 PF00534 Glycosyl transferases group 1 FIV03_04690 PF13439 Glycosyltransferase Family 4 FIV03_04700 PF01531 Glycosyl transferase family 11 FIV03_04720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV03_04725 PF01370 NAD dependent epimerase/dehydratase family FIV03_04730 PF16363 GDP-mannose 4,6 dehydratase FIV03_04745 PF00781 Diacylglycerol kinase catalytic domain FIV03_04750 PF03466 LysR substrate binding domain FIV03_04750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_04755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_04755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_04755 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_04770 PF00266 Aminotransferase class-V FIV03_04780 PF03976 Polyphosphate kinase 2 (PPK2) FIV03_04785 PF01569 PAP2 superfamily FIV03_04790 PF04143 Sulphur transport FIV03_04800 PF00753 Metallo-beta-lactamase superfamily FIV03_04810 PF00916 Sulfate permease family FIV03_04810 PF01740 STAS domain FIV03_04840 PF07690 Major Facilitator Superfamily FIV03_04845 PF01965 DJ-1/PfpI family FIV03_04850 PF01261 Xylose isomerase-like TIM barrel FIV03_04855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_04855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_04860 PF00005 ABC transporter FIV03_04865 PF02653 Branched-chain amino acid transport system / permease component FIV03_04870 PF13407 Periplasmic binding protein domain FIV03_04875 PF00480 ROK family FIV03_04875 PF01047 MarR family FIV03_04895 PF02525 Flavodoxin-like fold FIV03_04905 PF07969 Amidohydrolase family FIV03_04915 PF00005 ABC transporter FIV03_04920 PF09084 NMT1/THI5 like FIV03_04925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_04925 PF03466 LysR substrate binding domain FIV03_04940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIV03_04940 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_04945 PF01180 Dihydroorotate dehydrogenase FIV03_04950 PF00990 Diguanylate cyclase, GGDEF domain FIV03_04950 PF00563 EAL domain FIV03_04950 PF03707 Bacterial signalling protein N terminal repeat FIV03_04950 PF13188 PAS domain FIV03_04960 PF00881 Nitroreductase family FIV03_04965 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV03_04965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_04965 PF16886 ATPsynthase alpha/beta subunit N-term extension FIV03_04990 PF01813 ATP synthase subunit D FIV03_04995 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV03_04995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_05005 PF00175 Oxidoreductase NAD-binding domain FIV03_05005 PF00970 Oxidoreductase FAD-binding domain FIV03_05005 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_05010 PF00990 Diguanylate cyclase, GGDEF domain FIV03_05010 PF03707 Bacterial signalling protein N terminal repeat FIV03_05010 PF13188 PAS domain FIV03_05010 PF00563 EAL domain FIV03_05020 PF00356 Bacterial regulatory proteins, lacI family FIV03_05025 PF01547 Bacterial extracellular solute-binding protein FIV03_05035 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05040 PF17912 MalK OB fold domain FIV03_05040 PF00005 ABC transporter FIV03_05055 PF00248 Aldo/keto reductase family FIV03_05060 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain FIV03_05060 PF04616 Glycosyl hydrolases family 43 FIV03_05070 PF00480 ROK family FIV03_05070 PF01047 MarR family FIV03_05075 PF01547 Bacterial extracellular solute-binding protein FIV03_05080 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05085 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05095 PF02685 Glucokinase FIV03_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05100 PF03466 LysR substrate binding domain FIV03_05105 PF01494 FAD binding domain FIV03_05110 PF12697 Alpha/beta hydrolase family FIV03_05115 PF02627 Carboxymuconolactone decarboxylase family FIV03_05120 PF00775 Dioxygenase FIV03_05120 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FIV03_05125 PF00775 Dioxygenase FIV03_05130 PF05853 beta-keto acid cleavage enzyme FIV03_05135 PF10397 Adenylosuccinate lyase C-terminus FIV03_05135 PF00206 Lyase FIV03_05140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05140 PF03466 LysR substrate binding domain FIV03_05145 PF01799 [2Fe-2S] binding domain FIV03_05145 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_05150 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_05150 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_05165 PF01979 Amidohydrolase family FIV03_05170 PF14497 Glutathione S-transferase, C-terminal domain FIV03_05170 PF02798 Glutathione S-transferase, N-terminal domain FIV03_05180 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_05185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_05185 PF00005 ABC transporter FIV03_05190 PF03069 Acetamidase/Formamidase family FIV03_05195 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_05200 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05205 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_05205 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05215 PF02954 Bacterial regulatory protein, Fis family FIV03_05215 PF13188 PAS domain FIV03_05215 PF00158 Sigma-54 interaction domain FIV03_05220 PF07729 FCD domain FIV03_05220 PF00392 Bacterial regulatory proteins, gntR family FIV03_05225 PF00005 ABC transporter FIV03_05225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_05230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_05230 PF00005 ABC transporter FIV03_05235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_05240 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05255 PF03576 Peptidase family S58 FIV03_05260 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05265 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05270 PF00005 ABC transporter FIV03_05270 PF08402 TOBE domain FIV03_05275 PF13416 Bacterial extracellular solute-binding protein FIV03_05290 PF00202 Aminotransferase class-III FIV03_05325 PF00108 Thiolase, N-terminal domain FIV03_05325 PF02803 Thiolase, C-terminal domain FIV03_05330 PF13193 AMP-binding enzyme C-terminal domain FIV03_05330 PF00501 AMP-binding enzyme FIV03_05335 PF02632 BioY family FIV03_05340 PF02361 Cobalt transport protein FIV03_05345 PF00005 ABC transporter FIV03_05365 PF03466 LysR substrate binding domain FIV03_05365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05370 PF00551 Formyl transferase FIV03_05380 PF00202 Aminotransferase class-III FIV03_05390 PF03960 ArsC family FIV03_05395 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_05400 PF07687 Peptidase dimerisation domain FIV03_05400 PF01546 Peptidase family M20/M25/M40 FIV03_05405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_05410 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05415 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05415 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_05420 PF00005 ABC transporter FIV03_05420 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_05425 PF00403 Heavy-metal-associated domain FIV03_05430 PF00920 Dehydratase family FIV03_05440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_05445 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV03_05450 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_05455 PF04542 Sigma-70 region 2 FIV03_05455 PF08281 Sigma-70, region 4 FIV03_05455 PF12680 SnoaL-like domain FIV03_05465 PF00072 Response regulator receiver domain FIV03_05465 PF02954 Bacterial regulatory protein, Fis family FIV03_05465 PF00158 Sigma-54 interaction domain FIV03_05470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_05470 PF00512 His Kinase A (phospho-acceptor) domain FIV03_05470 PF02743 Cache domain FIV03_05475 PF00005 ABC transporter FIV03_05475 PF03459 TOBE domain FIV03_05480 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_05505 PF00583 Acetyltransferase (GNAT) family FIV03_05505 PF13673 Acetyltransferase (GNAT) domain FIV03_05510 PF03193 RsgA GTPase FIV03_05515 PF00285 Citrate synthase, C-terminal domain FIV03_05520 PF00285 Citrate synthase, C-terminal domain FIV03_05525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05525 PF03466 LysR substrate binding domain FIV03_05530 PF00067 Cytochrome P450 FIV03_05535 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_05540 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_05555 PF01037 Lrp/AsnC ligand binding domain FIV03_05560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_05570 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FIV03_05570 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FIV03_05575 PF02021 Uncharacterised protein family UPF0102 FIV03_05580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_05590 PF04127 DNA / pantothenate metabolism flavoprotein FIV03_05590 PF02441 Flavoprotein FIV03_05595 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FIV03_05610 PF00692 dUTPase FIV03_05615 PF13419 Haloacid dehalogenase-like hydrolase FIV03_05620 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_05625 PF00491 Arginase family FIV03_05635 PF01906 Putative heavy-metal-binding FIV03_05640 PF00155 Aminotransferase class I and II FIV03_05645 PF00743 Flavin-binding monooxygenase-like FIV03_05650 PF02954 Bacterial regulatory protein, Fis family FIV03_05650 PF01590 GAF domain FIV03_05650 PF00158 Sigma-54 interaction domain FIV03_05665 PF01497 Periplasmic binding protein FIV03_05670 PF01266 FAD dependent oxidoreductase FIV03_05675 PF01078 Magnesium chelatase, subunit ChlI FIV03_05675 PF13335 Magnesium chelatase, subunit ChlI C-terminal FIV03_05700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05700 PF03466 LysR substrate binding domain FIV03_05705 PF03060 Nitronate monooxygenase FIV03_05715 PF01367 5'-3' exonuclease, C-terminal SAM fold FIV03_05715 PF01612 3'-5' exonuclease FIV03_05715 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FIV03_05715 PF00476 DNA polymerase family A FIV03_05725 PF04186 FxsA cytoplasmic membrane protein FIV03_05735 PF06725 3D domain FIV03_05735 PF03562 MltA specific insert domain FIV03_05750 PF01909 Nucleotidyltransferase domain FIV03_05750 PF08335 GlnD PII-uridylyltransferase FIV03_05750 PF01842 ACT domain FIV03_05750 PF01966 HD domain FIV03_05755 PF03023 Lipid II flippase MurJ FIV03_05760 PF00579 tRNA synthetases class I (W and Y) FIV03_05775 PF13404 AsnC-type helix-turn-helix domain FIV03_05775 PF01037 Lrp/AsnC ligand binding domain FIV03_05780 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV03_05780 PF01627 Hpt domain FIV03_05780 PF00672 HAMP domain FIV03_05780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_05780 PF00512 His Kinase A (phospho-acceptor) domain FIV03_05780 PF00072 Response regulator receiver domain FIV03_05790 PF00905 Penicillin binding protein transpeptidase domain FIV03_05790 PF00912 Transglycosylase FIV03_05800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_05800 PF03466 LysR substrate binding domain FIV03_05810 PF00892 EamA-like transporter family FIV03_05830 PF00318 Ribosomal protein S2 FIV03_05835 PF06969 HemN C-terminal domain FIV03_05835 PF04055 Radical SAM superfamily FIV03_05840 PF01725 Ham1 family FIV03_05845 PF01138 3' exoribonuclease family, domain 1 FIV03_05845 PF03725 3' exoribonuclease family, domain 2 FIV03_05850 PF01628 HrcA protein C terminal domain FIV03_05855 PF00899 ThiF family FIV03_05860 PF02556 Preprotein translocase subunit SecB FIV03_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_05865 PF00512 His Kinase A (phospho-acceptor) domain FIV03_05870 PF00072 Response regulator receiver domain FIV03_05880 PF17200 Single Cache domain 2 FIV03_05880 PF00672 HAMP domain FIV03_05880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_05885 PF00440 Bacterial regulatory proteins, tetR family FIV03_05890 PF01042 Endoribonuclease L-PSP FIV03_05895 PF00561 alpha/beta hydrolase fold FIV03_05900 PF00485 Phosphoribulokinase / Uridine kinase family FIV03_05905 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FIV03_05910 PF00977 Histidine biosynthesis protein FIV03_05915 PF00977 Histidine biosynthesis protein FIV03_05925 PF00117 Glutamine amidotransferase class-I FIV03_05935 PF00475 Imidazoleglycerol-phosphate dehydratase FIV03_05940 PF00106 short chain dehydrogenase FIV03_05945 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FIV03_05955 PF02423 Ornithine cyclodeaminase/mu-crystallin family FIV03_05960 PF00491 Arginase family FIV03_05970 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV03_05970 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV03_05980 PF08245 Mur ligase middle domain FIV03_05985 PF01039 Carboxyl transferase domain FIV03_05990 PF00290 Tryptophan synthase alpha chain FIV03_06005 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_06010 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FIV03_06015 PF01541 GIY-YIG catalytic domain FIV03_06020 PF01515 Phosphate acetyl/butaryl transferase FIV03_06020 PF03949 Malic enzyme, NAD binding domain FIV03_06020 PF00390 Malic enzyme, N-terminal domain FIV03_06025 PF00488 MutS domain V FIV03_06025 PF05190 MutS family domain IV FIV03_06025 PF05188 MutS domain II FIV03_06025 PF01624 MutS domain I FIV03_06025 PF05192 MutS domain III FIV03_06030 PF07690 Major Facilitator Superfamily FIV03_06040 PF00730 HhH-GPD superfamily base excision DNA repair protein FIV03_06040 PF00633 Helix-hairpin-helix motif FIV03_06040 PF10576 Iron-sulfur binding domain of endonuclease III FIV03_06055 PF07977 FabA-like domain FIV03_06060 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_06060 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_06075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_06075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_06080 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase FIV03_06085 PF00929 Exonuclease FIV03_06090 PF01121 Dephospho-CoA kinase FIV03_06095 PF08501 Shikimate dehydrogenase substrate binding domain FIV03_06095 PF01488 Shikimate / quinate 5-dehydrogenase FIV03_06095 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIV03_06100 PF02545 Maf-like protein FIV03_06105 PF03618 Kinase/pyrophosphorylase FIV03_06110 PF01208 Uroporphyrinogen decarboxylase (URO-D) FIV03_06120 PF07497 Rho termination factor, RNA-binding domain FIV03_06120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_06120 PF07498 Rho termination factor, N-terminal domain FIV03_06125 PF13302 Acetyltransferase (GNAT) domain FIV03_06130 PF13302 Acetyltransferase (GNAT) domain FIV03_06135 PF01926 50S ribosome-binding GTPase FIV03_06135 PF10396 GTP-binding protein TrmE N-terminus FIV03_06135 PF12631 MnmE helical domain FIV03_06140 PF13932 GidA associated domain FIV03_06140 PF01134 Glucose inhibited division protein A FIV03_06145 PF02527 rRNA small subunit methyltransferase G FIV03_06150 PF13614 AAA domain FIV03_06155 PF02195 ParB-like nuclease domain FIV03_06155 PF17762 HTH domain found in ParB protein FIV03_06170 PF13603 Leucyl-tRNA synthetase, Domain 2 FIV03_06170 PF00133 tRNA synthetases class I (I, L, M and V) FIV03_06170 PF08264 Anticodon-binding domain of tRNA FIV03_06180 PF01168 Alanine racemase, N-terminal domain FIV03_06190 PF02386 Cation transport protein FIV03_06195 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_06205 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_06225 PF02881 SRP54-type protein, helical bundle domain FIV03_06225 PF02978 Signal peptide binding domain FIV03_06225 PF00448 SRP54-type protein, GTPase domain FIV03_06230 PF01817 Chorismate mutase type II FIV03_06230 PF02153 Prephenate dehydrogenase FIV03_06235 PF00886 Ribosomal protein S16 FIV03_06240 PF05239 PRC-barrel domain FIV03_06240 PF01782 RimM N-terminal domain FIV03_06250 PF01746 tRNA (Guanine-1)-methyltransferase FIV03_06255 PF01245 Ribosomal protein L19 FIV03_06260 PF00330 Aconitase family (aconitate hydratase) FIV03_06280 PF13193 AMP-binding enzyme C-terminal domain FIV03_06280 PF00501 AMP-binding enzyme FIV03_06280 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV03_06290 PF00092 von Willebrand factor type A domain FIV03_06300 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_06305 PF01730 UreF FIV03_06310 PF05194 UreE urease accessory protein, C-terminal domain FIV03_06310 PF02814 UreE urease accessory protein, N-terminal domain FIV03_06315 PF00043 Glutathione S-transferase, C-terminal domain FIV03_06315 PF13417 Glutathione S-transferase, N-terminal domain FIV03_06320 PF00449 Urease alpha-subunit, N-terminal domain FIV03_06320 PF01979 Amidohydrolase family FIV03_06330 PF07007 Lysozyme inhibitor LprI FIV03_06335 PF00699 Urease beta subunit FIV03_06340 PF00547 Urease, gamma subunit FIV03_06345 PF01774 UreD urease accessory protein FIV03_06360 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_06360 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV03_06370 PF01494 FAD binding domain FIV03_06375 PF00106 short chain dehydrogenase FIV03_06385 PF01923 Cobalamin adenosyltransferase FIV03_06395 PF05433 Glycine zipper 2TM domain FIV03_06395 PF16998 17 kDa outer membrane surface antigen FIV03_06405 PF08281 Sigma-70, region 4 FIV03_06405 PF04542 Sigma-70 region 2 FIV03_06415 PF01012 Electron transfer flavoprotein domain FIV03_06420 PF01012 Electron transfer flavoprotein domain FIV03_06420 PF00766 Electron transfer flavoprotein FAD-binding domain FIV03_06425 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_06425 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_06430 PF13193 AMP-binding enzyme C-terminal domain FIV03_06430 PF00501 AMP-binding enzyme FIV03_06450 PF08534 Redoxin FIV03_06455 PF00206 Lyase FIV03_06455 PF14698 Argininosuccinate lyase C-terminal FIV03_06465 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV03_06465 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV03_06475 PF00072 Response regulator receiver domain FIV03_06475 PF00486 Transcriptional regulatory protein, C terminal FIV03_06480 PF01171 PP-loop family FIV03_06480 PF00156 Phosphoribosyl transferase domain FIV03_06480 PF11734 TilS substrate C-terminal domain FIV03_06490 PF00005 ABC transporter FIV03_06510 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIV03_06520 PF04752 ChaC-like protein FIV03_06540 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_06550 PF00884 Sulfatase FIV03_06570 PF02525 Flavodoxin-like fold FIV03_06575 PF00296 Luciferase-like monooxygenase FIV03_06580 PF02655 ATP-grasp domain FIV03_06580 PF18419 ATP-grasp-like domain FIV03_06580 PF04262 Glutamate-cysteine ligase FIV03_06590 PF09397 Ftsk gamma domain FIV03_06590 PF17854 FtsK alpha domain FIV03_06590 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FIV03_06590 PF01580 FtsK/SpoIIIE family FIV03_06595 PF00155 Aminotransferase class I and II FIV03_06610 PF01435 Peptidase family M48 FIV03_06615 PF01189 16S rRNA methyltransferase RsmB/F FIV03_06615 PF01029 NusB family FIV03_06625 PF02142 MGS-like domain FIV03_06625 PF01808 AICARFT/IMPCHase bienzyme FIV03_06635 PF11700 Vacuole effluxer Atg22 like FIV03_06640 PF05088 Bacterial NAD-glutamate dehydrogenase FIV03_06650 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV03_06655 PF00694 Aconitase C-terminal domain FIV03_06665 PF01794 Ferric reductase like transmembrane component FIV03_06680 PF00072 Response regulator receiver domain FIV03_06680 PF00486 Transcriptional regulatory protein, C terminal FIV03_06695 PF04228 Putative neutral zinc metallopeptidase FIV03_06700 PF01678 Diaminopimelate epimerase FIV03_06705 PF00919 Uncharacterized protein family UPF0004 FIV03_06705 PF04055 Radical SAM superfamily FIV03_06710 PF02881 SRP54-type protein, helical bundle domain FIV03_06710 PF00448 SRP54-type protein, GTPase domain FIV03_06735 PF00753 Metallo-beta-lactamase superfamily FIV03_06735 PF16123 Hydroxyacylglutathione hydrolase C-terminus FIV03_06740 PF08241 Methyltransferase domain FIV03_06750 PF00561 alpha/beta hydrolase fold FIV03_06755 PF00800 Prephenate dehydratase FIV03_06755 PF01817 Chorismate mutase type II FIV03_06755 PF01842 ACT domain FIV03_06760 PF00155 Aminotransferase class I and II FIV03_06765 PF02153 Prephenate dehydrogenase FIV03_06770 PF00348 Polyprenyl synthetase FIV03_06780 PF00912 Transglycosylase FIV03_06785 PF01783 Ribosomal L32p protein family FIV03_06795 PF04279 Intracellular septation protein A FIV03_06810 PF02803 Thiolase, C-terminal domain FIV03_06810 PF00108 Thiolase, N-terminal domain FIV03_06815 PF05233 PHB accumulation regulatory domain FIV03_06815 PF07879 PHB/PHA accumulation regulator DNA-binding domain FIV03_06835 PF07731 Multicopper oxidase FIV03_06835 PF00394 Multicopper oxidase FIV03_06835 PF07732 Multicopper oxidase FIV03_06860 PF01235 Sodium:alanine symporter family FIV03_06865 PF00453 Ribosomal protein L20 FIV03_06870 PF01632 Ribosomal protein L35 FIV03_06875 PF02525 Flavodoxin-like fold FIV03_06880 PF03466 LysR substrate binding domain FIV03_06880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_06890 PF00107 Zinc-binding dehydrogenase FIV03_06905 PF00392 Bacterial regulatory proteins, gntR family FIV03_06905 PF07729 FCD domain FIV03_06965 PF00271 Helicase conserved C-terminal domain FIV03_06965 PF00176 SNF2 family N-terminal domain FIV03_06985 PF12705 PD-(D/E)XK nuclease superfamily FIV03_06985 PF00580 UvrD/REP helicase N-terminal domain FIV03_06985 PF13361 UvrD-like helicase C-terminal domain FIV03_06990 PF04851 Type III restriction enzyme, res subunit FIV03_06990 PF02151 UvrB/uvrC motif FIV03_06990 PF12344 Ultra-violet resistance protein B FIV03_06990 PF17757 UvrB interaction domain FIV03_06990 PF00271 Helicase conserved C-terminal domain FIV03_07005 PF04002 RadC-like JAB domain FIV03_07040 PF00436 Single-strand binding protein family FIV03_07050 PF01381 Helix-turn-helix FIV03_07080 PF13614 AAA domain FIV03_07110 PF02534 Type IV secretory system Conjugative DNA transfer FIV03_07130 PF00437 Type II/IV secretion system protein FIV03_07145 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FIV03_07160 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FIV03_07175 PF03743 Bacterial conjugation TrbI-like protein FIV03_07185 PF03466 LysR substrate binding domain FIV03_07185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_07190 PF02803 Thiolase, C-terminal domain FIV03_07190 PF00108 Thiolase, N-terminal domain FIV03_07195 PF01144 Coenzyme A transferase FIV03_07200 PF01144 Coenzyme A transferase FIV03_07205 PF01614 Bacterial transcriptional regulator FIV03_07205 PF09339 IclR helix-turn-helix domain FIV03_07220 PF02653 Branched-chain amino acid transport system / permease component FIV03_07230 PF02653 Branched-chain amino acid transport system / permease component FIV03_07245 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_07245 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_07250 PF00171 Aldehyde dehydrogenase family FIV03_07255 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_07265 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_07270 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_07270 PF00107 Zinc-binding dehydrogenase FIV03_07275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_07275 PF03466 LysR substrate binding domain FIV03_07280 PF00206 Lyase FIV03_07280 PF10397 Adenylosuccinate lyase C-terminus FIV03_07285 PF00775 Dioxygenase FIV03_07290 PF00775 Dioxygenase FIV03_07290 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FIV03_07300 PF12146 Serine aminopeptidase, S33 FIV03_07305 PF03466 LysR substrate binding domain FIV03_07305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_07310 PF00171 Aldehyde dehydrogenase family FIV03_07315 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FIV03_07315 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FIV03_07320 PF05378 Hydantoinase/oxoprolinase N-terminal region FIV03_07320 PF01968 Hydantoinase/oxoprolinase FIV03_07325 PF05378 Hydantoinase/oxoprolinase N-terminal region FIV03_07325 PF01968 Hydantoinase/oxoprolinase FIV03_07330 PF02538 Hydantoinase B/oxoprolinase FIV03_07340 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_07355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_07355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_07355 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_07360 PF01842 ACT domain FIV03_07360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_07360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_07380 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_07390 PF00355 Rieske [2Fe-2S] domain FIV03_07395 PF01070 FMN-dependent dehydrogenase FIV03_07400 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_07400 PF00970 Oxidoreductase FAD-binding domain FIV03_07400 PF00175 Oxidoreductase NAD-binding domain FIV03_07405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_07405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_07410 PF09084 NMT1/THI5 like FIV03_07425 PF01047 MarR family FIV03_07445 PF01614 Bacterial transcriptional regulator FIV03_07445 PF09339 IclR helix-turn-helix domain FIV03_07460 PF01548 Transposase FIV03_07460 PF02371 Transposase IS116/IS110/IS902 family FIV03_07475 PF01435 Peptidase family M48 FIV03_07475 PF13181 Tetratricopeptide repeat FIV03_07480 PF00140 Sigma-70 factor, region 1.2 FIV03_07480 PF04545 Sigma-70, region 4 FIV03_07480 PF04542 Sigma-70 region 2 FIV03_07485 PF02559 CarD-like/TRCF domain FIV03_07490 PF11953 Domain of unknown function (DUF3470) FIV03_07490 PF00037 4Fe-4S binding domain FIV03_07505 PF02436 Conserved carboxylase domain FIV03_07505 PF00682 HMGL-like FIV03_07505 PF00364 Biotin-requiring enzyme FIV03_07505 PF02785 Biotin carboxylase C-terminal domain FIV03_07505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV03_07505 PF00289 Biotin carboxylase, N-terminal domain FIV03_07515 PF00117 Glutamine amidotransferase class-I FIV03_07525 PF09375 Imelysin FIV03_07575 PF00625 Guanylate kinase FIV03_07580 PF07969 Amidohydrolase family FIV03_07585 PF06299 Protein of unknown function (DUF1045) FIV03_07590 PF00005 ABC transporter FIV03_07595 PF00005 ABC transporter FIV03_07600 PF06007 Phosphonate metabolism protein PhnJ FIV03_07605 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_07610 PF05861 Bacterial phosphonate metabolism protein (PhnI) FIV03_07615 PF05845 Bacterial phosphonate metabolism protein (PhnH) FIV03_07620 PF06754 Phosphonate metabolism protein PhnG FIV03_07625 PF07702 UTRA domain FIV03_07625 PF00392 Bacterial regulatory proteins, gntR family FIV03_07630 PF12833 Helix-turn-helix domain FIV03_07630 PF12852 Cupin FIV03_07645 PF00561 alpha/beta hydrolase fold FIV03_07665 PF00561 alpha/beta hydrolase fold FIV03_07685 PF17200 Single Cache domain 2 FIV03_07685 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_07685 PF00672 HAMP domain FIV03_07695 PF00005 ABC transporter FIV03_07715 PF01810 LysE type translocator FIV03_07745 PF00392 Bacterial regulatory proteins, gntR family FIV03_07745 PF07729 FCD domain FIV03_07755 PF00884 Sulfatase FIV03_07760 PF03466 LysR substrate binding domain FIV03_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_07765 PF00202 Aminotransferase class-III FIV03_07785 PF01928 CYTH domain FIV03_07830 PF01527 Transposase FIV03_07855 PF09335 SNARE associated Golgi protein FIV03_07875 PF00719 Inorganic pyrophosphatase FIV03_07890 PF00368 Hydroxymethylglutaryl-coenzyme A reductase FIV03_07895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_07905 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_07910 PF00155 Aminotransferase class I and II FIV03_07910 PF00392 Bacterial regulatory proteins, gntR family FIV03_07925 PF01027 Inhibitor of apoptosis-promoting Bax1 FIV03_07940 PF00005 ABC transporter FIV03_07945 PF13472 GDSL-like Lipase/Acylhydrolase family FIV03_07950 PF00248 Aldo/keto reductase family FIV03_07955 PF02834 LigT like Phosphoesterase FIV03_07965 PF13439 Glycosyltransferase Family 4 FIV03_07965 PF00534 Glycosyl transferases group 1 FIV03_07980 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV03_07990 PF00512 His Kinase A (phospho-acceptor) domain FIV03_07990 PF01627 Hpt domain FIV03_07990 PF00072 Response regulator receiver domain FIV03_07990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_07995 PF00557 Metallopeptidase family M24 FIV03_08010 PF01569 PAP2 superfamily FIV03_08020 PF01451 Low molecular weight phosphotyrosine protein phosphatase FIV03_08025 PF01329 Pterin 4 alpha carbinolamine dehydratase FIV03_08030 PF01206 Sulfurtransferase TusA FIV03_08045 PF07969 Amidohydrolase family FIV03_08050 PF00543 Nitrogen regulatory protein P-II FIV03_08055 PF00909 Ammonium Transporter Family FIV03_08060 PF00909 Ammonium Transporter Family FIV03_08065 PF13419 Haloacid dehalogenase-like hydrolase FIV03_08070 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_08075 PF16916 Dimerisation domain of Zinc Transporter FIV03_08075 PF01545 Cation efflux family FIV03_08090 PF00781 Diacylglycerol kinase catalytic domain FIV03_08095 PF04101 Glycosyltransferase family 28 C-terminal domain FIV03_08095 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FIV03_08110 PF07885 Ion channel FIV03_08110 PF00027 Cyclic nucleotide-binding domain FIV03_08120 PF01757 Acyltransferase family FIV03_08125 PF16363 GDP-mannose 4,6 dehydratase FIV03_08130 PF08534 Redoxin FIV03_08140 PF01578 Cytochrome C assembly protein FIV03_08145 PF03379 CcmB protein FIV03_08150 PF00005 ABC transporter FIV03_08180 PF17863 AAA lid domain FIV03_08180 PF07726 ATPase family associated with various cellular activities (AAA) FIV03_08200 PF00330 Aconitase family (aconitate hydratase) FIV03_08200 PF00694 Aconitase C-terminal domain FIV03_08205 PF11791 Aconitate B N-terminal domain FIV03_08205 PF06434 Aconitate hydratase 2 N-terminus FIV03_08205 PF00330 Aconitase family (aconitate hydratase) FIV03_08215 PF14489 QueF-like protein FIV03_08220 PF04055 Radical SAM superfamily FIV03_08225 PF01242 6-pyruvoyl tetrahydropterin synthase FIV03_08230 PF06508 Queuosine biosynthesis protein QueC FIV03_08240 PF08543 Phosphomethylpyrimidine kinase FIV03_08245 PF04551 GcpE protein FIV03_08280 PF02325 YGGT family FIV03_08305 PF03966 Trm112p-like protein FIV03_08310 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV03_08310 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_08310 PF02190 ATP-dependent protease La (LON) substrate-binding domain FIV03_08315 PF00085 Thioredoxin FIV03_08330 PF03253 Urea transporter FIV03_08335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_08335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_08370 PF02810 SEC-C motif FIV03_08385 PF00501 AMP-binding enzyme FIV03_08385 PF13193 AMP-binding enzyme C-terminal domain FIV03_08390 PF00672 HAMP domain FIV03_08390 PF17200 Single Cache domain 2 FIV03_08390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_08395 PF00589 Phage integrase family FIV03_08395 PF02899 Phage integrase, N-terminal SAM-like domain FIV03_08405 PF01202 Shikimate kinase FIV03_08410 PF01761 3-dehydroquinate synthase FIV03_08415 PF01595 Cyclin M transmembrane N-terminal domain FIV03_08415 PF03471 Transporter associated domain FIV03_08415 PF00571 CBS domain FIV03_08420 PF01722 BolA-like protein FIV03_08425 PF00226 DnaJ domain FIV03_08430 PF12556 Cobaltochelatase CobS subunit N terminal FIV03_08430 PF08406 CbbQ/NirQ/NorQ C-terminal FIV03_08430 PF07728 AAA domain (dynein-related subfamily) FIV03_08435 PF06213 Cobalamin biosynthesis protein CobT FIV03_08435 PF11775 Cobalamin biosynthesis protein CobT VWA domain FIV03_08445 PF02592 Putative vitamin uptake transporter FIV03_08450 PF00830 Ribosomal L28 family FIV03_08460 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FIV03_08465 PF03734 L,D-transpeptidase catalytic domain FIV03_08475 PF00293 NUDIX domain FIV03_08485 PF01425 Amidase FIV03_08490 PF00196 Bacterial regulatory proteins, luxR family FIV03_08490 PF00072 Response regulator receiver domain FIV03_08495 PF01575 MaoC like domain FIV03_08505 PF04143 Sulphur transport FIV03_08525 PF07690 Major Facilitator Superfamily FIV03_08535 PF00809 Pterin binding enzyme FIV03_08540 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FIV03_08555 PF00764 Arginosuccinate synthase FIV03_08565 PF01799 [2Fe-2S] binding domain FIV03_08565 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_08570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_08575 PF00672 HAMP domain FIV03_08575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_08580 PF04055 Radical SAM superfamily FIV03_08590 PF04545 Sigma-70, region 4 FIV03_08590 PF04542 Sigma-70 region 2 FIV03_08600 PF00107 Zinc-binding dehydrogenase FIV03_08600 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_08605 PF03372 Endonuclease/Exonuclease/phosphatase family FIV03_08615 PF01183 Glycosyl hydrolases family 25 FIV03_08635 PF13649 Methyltransferase domain FIV03_08650 PF00990 Diguanylate cyclase, GGDEF domain FIV03_08650 PF17151 Periplasmic sensor domain FIV03_08660 PF00484 Carbonic anhydrase FIV03_08670 PF00596 Class II Aldolase and Adducin N-terminal domain FIV03_08675 PF04198 Putative sugar-binding domain FIV03_08680 PF01008 Initiation factor 2 subunit family FIV03_08685 PF01636 Phosphotransferase enzyme family FIV03_08690 PF00005 ABC transporter FIV03_08695 PF02653 Branched-chain amino acid transport system / permease component FIV03_08705 PF13426 PAS domain FIV03_08705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_08705 PF08447 PAS fold FIV03_08715 PF00672 HAMP domain FIV03_08715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_08715 PF17202 Single cache domain 3 FIV03_08720 PF01497 Periplasmic binding protein FIV03_08725 PF01032 FecCD transport family FIV03_08730 PF00005 ABC transporter FIV03_08765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_08765 PF03466 LysR substrate binding domain FIV03_08770 PF00892 EamA-like transporter family FIV03_08780 PF02774 Semialdehyde dehydrogenase, dimerisation domain FIV03_08780 PF01118 Semialdehyde dehydrogenase, NAD binding domain FIV03_08795 PF01321 Creatinase/Prolidase N-terminal domain FIV03_08795 PF00557 Metallopeptidase family M24 FIV03_08815 PF07690 Major Facilitator Superfamily FIV03_08835 PF01047 MarR family FIV03_08845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_08855 PF00180 Isocitrate/isopropylmalate dehydrogenase FIV03_08870 PF01546 Peptidase family M20/M25/M40 FIV03_08870 PF07687 Peptidase dimerisation domain FIV03_08890 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FIV03_08890 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FIV03_08905 PF00814 Glycoprotease family FIV03_08910 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FIV03_08910 PF03900 Porphobilinogen deaminase, C-terminal domain FIV03_08940 PF18755 Restriction Enzyme Adenine Methylase Associated FIV03_08940 PF01555 DNA methylase FIV03_09070 PF06074 Protein of unknown function (DUF935) FIV03_09075 PF03237 Terminase-like family FIV03_09230 PF00072 Response regulator receiver domain FIV03_09240 PF00378 Enoyl-CoA hydratase/isomerase FIV03_09245 PF00682 HMGL-like FIV03_09250 PF13193 AMP-binding enzyme C-terminal domain FIV03_09250 PF00501 AMP-binding enzyme FIV03_09255 PF02785 Biotin carboxylase C-terminal domain FIV03_09255 PF00289 Biotin carboxylase, N-terminal domain FIV03_09255 PF00364 Biotin-requiring enzyme FIV03_09255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV03_09265 PF01661 Macro domain FIV03_09275 PF01039 Carboxyl transferase domain FIV03_09285 PF03976 Polyphosphate kinase 2 (PPK2) FIV03_09290 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_09290 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_09295 PF00753 Metallo-beta-lactamase superfamily FIV03_09300 PF12833 Helix-turn-helix domain FIV03_09310 PF00459 Inositol monophosphatase family FIV03_09315 PF00005 ABC transporter FIV03_09315 PF08402 TOBE domain FIV03_09320 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09335 PF00072 Response regulator receiver domain FIV03_09335 PF00486 Transcriptional regulatory protein, C terminal FIV03_09340 PF00512 His Kinase A (phospho-acceptor) domain FIV03_09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_09340 PF00072 Response regulator receiver domain FIV03_09340 PF13188 PAS domain FIV03_09340 PF08448 PAS fold FIV03_09350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_09350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_09355 PF01144 Coenzyme A transferase FIV03_09360 PF00378 Enoyl-CoA hydratase/isomerase FIV03_09370 PF00356 Bacterial regulatory proteins, lacI family FIV03_09375 PF01547 Bacterial extracellular solute-binding protein FIV03_09380 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09390 PF00005 ABC transporter FIV03_09390 PF17912 MalK OB fold domain FIV03_09395 PF05199 GMC oxidoreductase FIV03_09395 PF00732 GMC oxidoreductase FIV03_09405 PF00732 GMC oxidoreductase FIV03_09405 PF05199 GMC oxidoreductase FIV03_09420 PF00356 Bacterial regulatory proteins, lacI family FIV03_09425 PF05161 MOFRL family FIV03_09425 PF13660 Domain of unknown function (DUF4147) FIV03_09430 PF13419 Haloacid dehalogenase-like hydrolase FIV03_09435 PF04542 Sigma-70 region 2 FIV03_09435 PF08281 Sigma-70, region 4 FIV03_09435 PF12680 SnoaL-like domain FIV03_09440 PF03358 NADPH-dependent FMN reductase FIV03_09445 PF00707 Translation initiation factor IF-3, C-terminal domain FIV03_09445 PF05198 Translation initiation factor IF-3, N-terminal domain FIV03_09455 PF06803 Protein of unknown function (DUF1232) FIV03_09500 PF02308 MgtC family FIV03_09505 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_09505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_09505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_09510 PF03631 Virulence factor BrkB FIV03_09520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_09520 PF17200 Single Cache domain 2 FIV03_09520 PF00672 HAMP domain FIV03_09525 PF14759 Reductase C-terminal FIV03_09525 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_09535 PF00561 alpha/beta hydrolase fold FIV03_09535 PF00364 Biotin-requiring enzyme FIV03_09555 PF00535 Glycosyl transferase family 2 FIV03_09560 PF01043 SecA preprotein cross-linking domain FIV03_09560 PF07516 SecA Wing and Scaffold domain FIV03_09560 PF02810 SEC-C motif FIV03_09560 PF07517 SecA DEAD-like domain FIV03_09565 PF00639 PPIC-type PPIASE domain FIV03_09570 PF01960 ArgJ family FIV03_09575 PF00293 NUDIX domain FIV03_09590 PF00156 Phosphoribosyl transferase domain FIV03_09595 PF00462 Glutaredoxin FIV03_09600 PF00795 Carbon-nitrogen hydrolase FIV03_09620 PF12697 Alpha/beta hydrolase family FIV03_09630 PF13840 ACT domain FIV03_09630 PF00696 Amino acid kinase family FIV03_09630 PF01842 ACT domain FIV03_09635 PF02896 PEP-utilising enzyme, TIM barrel domain FIV03_09635 PF01590 GAF domain FIV03_09635 PF00391 PEP-utilising enzyme, mobile domain FIV03_09635 PF05524 PEP-utilising enzyme, N-terminal FIV03_09640 PF00472 RF-1 domain FIV03_09640 PF03462 PCRF domain FIV03_09645 PF17827 PrmC N-terminal domain FIV03_09645 PF05175 Methyltransferase small domain FIV03_09655 PF02861 Clp amino terminal domain, pathogenicity island component FIV03_09655 PF17871 AAA lid domain FIV03_09655 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_09655 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_09655 PF07724 AAA domain (Cdc48 subfamily) FIV03_09680 PF04225 Opacity-associated protein A LysM-like domain FIV03_09680 PF01551 Peptidase family M23 FIV03_09715 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_09725 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_09730 PF00873 AcrB/AcrD/AcrF family FIV03_09735 PF13533 Biotin-lipoyl like FIV03_09745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_09745 PF03466 LysR substrate binding domain FIV03_09750 PF01266 FAD dependent oxidoreductase FIV03_09755 PF05199 GMC oxidoreductase FIV03_09755 PF00732 GMC oxidoreductase FIV03_09760 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09765 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09770 PF00005 ABC transporter FIV03_09770 PF08402 TOBE domain FIV03_09775 PF13416 Bacterial extracellular solute-binding protein FIV03_09780 PF00392 Bacterial regulatory proteins, gntR family FIV03_09780 PF00155 Aminotransferase class I and II FIV03_09785 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_09785 PF13378 Enolase C-terminal domain-like FIV03_09800 PF00072 Response regulator receiver domain FIV03_09800 PF00196 Bacterial regulatory proteins, luxR family FIV03_09820 PF00005 ABC transporter FIV03_09820 PF00664 ABC transporter transmembrane region FIV03_09825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_09825 PF00529 HlyD membrane-fusion protein of T1SS FIV03_09845 PF00923 Transaldolase/Fructose-6-phosphate aldolase FIV03_09850 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_09850 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_09855 PF00106 short chain dehydrogenase FIV03_09860 PF02653 Branched-chain amino acid transport system / permease component FIV03_09865 PF00005 ABC transporter FIV03_09875 PF00356 Bacterial regulatory proteins, lacI family FIV03_09890 PF08281 Sigma-70, region 4 FIV03_09890 PF04542 Sigma-70 region 2 FIV03_09905 PF13280 WYL domain FIV03_09905 PF08279 HTH domain FIV03_09910 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FIV03_09915 PF00361 Proton-conducting membrane transporter FIV03_09915 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FIV03_09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_09920 PF03466 LysR substrate binding domain FIV03_09925 PF02321 Outer membrane efflux protein FIV03_09930 PF00873 AcrB/AcrD/AcrF family FIV03_09935 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_09935 PF00529 HlyD membrane-fusion protein of T1SS FIV03_09950 PF10996 Beta-Casp domain FIV03_09950 PF00753 Metallo-beta-lactamase superfamily FIV03_09950 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FIV03_09960 PF17969 L,D-transpeptidase C-terminal domain FIV03_09960 PF01476 LysM domain FIV03_09960 PF03734 L,D-transpeptidase catalytic domain FIV03_09970 PF01628 HrcA protein C terminal domain FIV03_09980 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09985 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_09990 PF00005 ABC transporter FIV03_09995 PF00701 Dihydrodipicolinate synthetase family FIV03_10000 PF05544 Proline racemase FIV03_10005 PF00171 Aldehyde dehydrogenase family FIV03_10010 PF01266 FAD dependent oxidoreductase FIV03_10015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_10015 PF13378 Enolase C-terminal domain-like FIV03_10020 PF05544 Proline racemase FIV03_10035 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIV03_10035 PF03807 NADP oxidoreductase coenzyme F420-dependent FIV03_10040 PF08125 Mannitol dehydrogenase C-terminal domain FIV03_10040 PF01232 Mannitol dehydrogenase Rossmann domain FIV03_10045 PF13802 Galactose mutarotase-like FIV03_10045 PF01055 Glycosyl hydrolases family 31 FIV03_10050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_10055 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV03_10060 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_10065 PF00703 Glycosyl hydrolases family 2 FIV03_10065 PF16353 Domain of unknown function(DUF4981) FIV03_10065 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FIV03_10065 PF02929 Beta galactosidase small chain FIV03_10065 PF02837 Glycosyl hydrolases family 2, sugar binding domain FIV03_10070 PF07729 FCD domain FIV03_10070 PF00392 Bacterial regulatory proteins, gntR family FIV03_10075 PF03786 D-mannonate dehydratase (UxuA) FIV03_10085 PF00809 Pterin binding enzyme FIV03_10130 PF00698 Acyl transferase domain FIV03_10130 PF08990 Erythronolide synthase docking FIV03_10130 PF16197 Ketoacyl-synthetase C-terminal extension FIV03_10130 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_10130 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_10130 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_10130 PF08659 KR domain FIV03_10130 PF14765 Polyketide synthase dehydratase FIV03_10130 PF09277 Erythronolide synthase, docking FIV03_10130 PF00550 Phosphopantetheine attachment site FIV03_10135 PF05853 beta-keto acid cleavage enzyme FIV03_10145 PF04444 Catechol dioxygenase N terminus FIV03_10145 PF00775 Dioxygenase FIV03_10150 PF02798 Glutathione S-transferase, N-terminal domain FIV03_10150 PF00043 Glutathione S-transferase, C-terminal domain FIV03_10155 PF11862 Domain of unknown function (DUF3382) FIV03_10155 PF02653 Branched-chain amino acid transport system / permease component FIV03_10160 PF11862 Domain of unknown function (DUF3382) FIV03_10160 PF02653 Branched-chain amino acid transport system / permease component FIV03_10165 PF00005 ABC transporter FIV03_10170 PF00005 ABC transporter FIV03_10170 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_10180 PF00356 Bacterial regulatory proteins, lacI family FIV03_10185 PF00171 Aldehyde dehydrogenase family FIV03_10190 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_10195 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_10200 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_10210 PF03401 Tripartite tricarboxylate transporter family receptor FIV03_10225 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_10230 PF09339 IclR helix-turn-helix domain FIV03_10230 PF01614 Bacterial transcriptional regulator FIV03_10240 PF00144 Beta-lactamase FIV03_10255 PF00072 Response regulator receiver domain FIV03_10255 PF00158 Sigma-54 interaction domain FIV03_10255 PF02954 Bacterial regulatory protein, Fis family FIV03_10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_10260 PF00989 PAS fold FIV03_10260 PF00512 His Kinase A (phospho-acceptor) domain FIV03_10265 PF07690 Major Facilitator Superfamily FIV03_10275 PF00005 ABC transporter FIV03_10280 PF02653 Branched-chain amino acid transport system / permease component FIV03_10285 PF04198 Putative sugar-binding domain FIV03_10285 PF00325 Bacterial regulatory proteins, crp family FIV03_10290 PF00248 Aldo/keto reductase family FIV03_10295 PF01266 FAD dependent oxidoreductase FIV03_10295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIV03_10300 PF01791 DeoC/LacD family aldolase FIV03_10305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_10305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_10310 PF00732 GMC oxidoreductase FIV03_10310 PF05199 GMC oxidoreductase FIV03_10315 PF09856 Predicted transcriptional regulator (DUF2083) FIV03_10315 PF06114 IrrE N-terminal-like domain FIV03_10315 PF01381 Helix-turn-helix FIV03_10320 PF00196 Bacterial regulatory proteins, luxR family FIV03_10325 PF03466 LysR substrate binding domain FIV03_10325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_10330 PF02633 Creatinine amidohydrolase FIV03_10340 PF07690 Major Facilitator Superfamily FIV03_10345 PF00005 ABC transporter FIV03_10365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_10365 PF03466 LysR substrate binding domain FIV03_10380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV03_10400 PF01223 DNA/RNA non-specific endonuclease FIV03_10405 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FIV03_10405 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FIV03_10420 PF00691 OmpA family FIV03_10425 PF00356 Bacterial regulatory proteins, lacI family FIV03_10430 PF02028 BCCT, betaine/carnitine/choline family transporter FIV03_10440 PF00990 Diguanylate cyclase, GGDEF domain FIV03_10440 PF17151 Periplasmic sensor domain FIV03_10445 PF00155 Aminotransferase class I and II FIV03_10450 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV03_10450 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_10465 PF03466 LysR substrate binding domain FIV03_10465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_10475 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FIV03_10475 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FIV03_10485 PF07722 Peptidase C26 FIV03_10490 PF00196 Bacterial regulatory proteins, luxR family FIV03_10490 PF00072 Response regulator receiver domain FIV03_10495 PF17200 Single Cache domain 2 FIV03_10495 PF07730 Histidine kinase FIV03_10500 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_10510 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_10520 PF00486 Transcriptional regulatory protein, C terminal FIV03_10520 PF00072 Response regulator receiver domain FIV03_10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_10525 PF00072 Response regulator receiver domain FIV03_10525 PF13426 PAS domain FIV03_10530 PF03797 Autotransporter beta-domain FIV03_10530 PF00082 Subtilase family FIV03_10530 PF12951 Passenger-associated-transport-repeat FIV03_10540 PF05443 ROS/MUCR transcriptional regulator protein FIV03_10545 PF02530 Porin subfamily FIV03_10550 PF00356 Bacterial regulatory proteins, lacI family FIV03_10555 PF00501 AMP-binding enzyme FIV03_10560 PF00005 ABC transporter FIV03_10560 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_10565 PF02653 Branched-chain amino acid transport system / permease component FIV03_10580 PF00005 ABC transporter FIV03_10585 PF14535 AMP-binding enzyme C-terminal domain FIV03_10585 PF00501 AMP-binding enzyme FIV03_10590 PF00762 Ferrochelatase FIV03_10595 PF01145 SPFH domain / Band 7 family FIV03_10595 PF16200 C-terminal region of band_7 FIV03_10605 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV03_10605 PF00691 OmpA family FIV03_10610 PF01618 MotA/TolQ/ExbB proton channel family FIV03_10615 PF01380 SIS domain FIV03_10615 PF00571 CBS domain FIV03_10625 PF13406 Transglycosylase SLT domain FIV03_10635 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FIV03_10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_10640 PF04898 Glutamate synthase central domain FIV03_10640 PF01493 GXGXG motif FIV03_10640 PF01645 Conserved region in glutamate synthase FIV03_10640 PF00310 Glutamine amidotransferases class-II FIV03_10650 PF05114 Protein of unknown function (DUF692) FIV03_10665 PF01212 Beta-eliminating lyase FIV03_10670 PF00011 Hsp20/alpha crystallin family FIV03_10685 PF00459 Inositol monophosphatase family FIV03_10700 PF00072 Response regulator receiver domain FIV03_10710 PF00444 Ribosomal protein L36 FIV03_10720 PF00561 alpha/beta hydrolase fold FIV03_10725 PF00224 Pyruvate kinase, barrel domain FIV03_10725 PF02887 Pyruvate kinase, alpha/beta domain FIV03_10745 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FIV03_10755 PF00072 Response regulator receiver domain FIV03_10755 PF00158 Sigma-54 interaction domain FIV03_10755 PF02954 Bacterial regulatory protein, Fis family FIV03_10790 PF00849 RNA pseudouridylate synthase FIV03_10805 PF01165 Ribosomal protein S21 FIV03_10810 PF01554 MatE FIV03_10815 PF02222 ATP-grasp domain FIV03_10815 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FIV03_10820 PF00731 AIR carboxylase FIV03_10835 PF00501 AMP-binding enzyme FIV03_10835 PF13193 AMP-binding enzyme C-terminal domain FIV03_10845 PF16177 Acetyl-coenzyme A synthetase N-terminus FIV03_10845 PF00501 AMP-binding enzyme FIV03_10845 PF13193 AMP-binding enzyme C-terminal domain FIV03_10855 PF00005 ABC transporter FIV03_10855 PF00664 ABC transporter transmembrane region FIV03_10860 PF01197 Ribosomal protein L31 FIV03_10875 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_10875 PF08659 KR domain FIV03_10875 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_10875 PF16197 Ketoacyl-synthetase C-terminal extension FIV03_10875 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_10875 PF14765 Polyketide synthase dehydratase FIV03_10875 PF00550 Phosphopantetheine attachment site FIV03_10875 PF00698 Acyl transferase domain FIV03_10890 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_10895 PF06906 Protein of unknown function (DUF1272) FIV03_10905 PF00691 OmpA family FIV03_10905 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV03_10915 PF00459 Inositol monophosphatase family FIV03_10920 PF01132 Elongation factor P (EF-P) OB domain FIV03_10920 PF08207 Elongation factor P (EF-P) KOW-like domain FIV03_10920 PF09285 Elongation factor P, C-terminal FIV03_10935 PF01116 Fructose-bisphosphate aldolase class-II FIV03_10945 PF00162 Phosphoglycerate kinase FIV03_10965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV03_10965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV03_10970 PF00456 Transketolase, thiamine diphosphate binding domain FIV03_10970 PF02779 Transketolase, pyrimidine binding domain FIV03_10970 PF02780 Transketolase, C-terminal domain FIV03_10995 PF13277 YmdB-like protein FIV03_11000 PF01709 Transcriptional regulator FIV03_11015 PF02075 Crossover junction endodeoxyribonuclease RuvC FIV03_11020 PF01330 RuvA N terminal domain FIV03_11020 PF07499 RuvA, C-terminal domain FIV03_11030 PF05496 Holliday junction DNA helicase RuvB P-loop domain FIV03_11030 PF17864 RuvB AAA lid domain FIV03_11030 PF05491 RuvB C-terminal winged helix domain FIV03_11035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_11035 PF00672 HAMP domain FIV03_11040 PF03061 Thioesterase superfamily FIV03_11045 PF01618 MotA/TolQ/ExbB proton channel family FIV03_11050 PF02472 Biopolymer transport protein ExbD/TolR FIV03_11060 PF07676 WD40-like Beta Propeller Repeat FIV03_11060 PF04052 TolB amino-terminal domain FIV03_11065 PF00691 OmpA family FIV03_11075 PF01171 PP-loop family FIV03_11080 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_11080 PF06480 FtsH Extracellular FIV03_11080 PF01434 Peptidase family M41 FIV03_11080 PF17862 AAA+ lid domain FIV03_11085 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FIV03_11085 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FIV03_11085 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FIV03_11085 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FIV03_11090 PF13505 Outer membrane protein beta-barrel domain FIV03_11100 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_11100 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_11100 PF01842 ACT domain FIV03_11105 PF00892 EamA-like transporter family FIV03_11115 PF00709 Adenylosuccinate synthetase FIV03_11125 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11130 PF09084 NMT1/THI5 like FIV03_11135 PF00140 Sigma-70 factor, region 1.2 FIV03_11135 PF04542 Sigma-70 region 2 FIV03_11135 PF04545 Sigma-70, region 4 FIV03_11140 PF00849 RNA pseudouridylate synthase FIV03_11155 PF00455 DeoR C terminal sensor domain FIV03_11155 PF08220 DeoR-like helix-turn-helix domain FIV03_11175 PF10090 Histidine phosphotransferase C-terminal domain FIV03_11180 PF02895 Signal transducing histidine kinase, homodimeric domain FIV03_11180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_11180 PF01627 Hpt domain FIV03_11180 PF01584 CheW-like domain FIV03_11180 PF07194 P2 response regulator binding domain FIV03_11185 PF01584 CheW-like domain FIV03_11190 PF00072 Response regulator receiver domain FIV03_11195 PF01339 CheB methylesterase FIV03_11195 PF00072 Response regulator receiver domain FIV03_11200 PF01739 CheR methyltransferase, SAM binding domain FIV03_11200 PF03705 CheR methyltransferase, all-alpha domain FIV03_11205 PF00753 Metallo-beta-lactamase superfamily FIV03_11205 PF10996 Beta-Casp domain FIV03_11205 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FIV03_11215 PF00486 Transcriptional regulatory protein, C terminal FIV03_11215 PF00072 Response regulator receiver domain FIV03_11225 PF02874 ATP synthase alpha/beta family, beta-barrel domain FIV03_11225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_11225 PF18269 T3SS EscN ATPase C-terminal domain FIV03_11245 PF00924 Mechanosensitive ion channel FIV03_11250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIV03_11250 PF01266 FAD dependent oxidoreductase FIV03_11255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_11255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_11260 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_11265 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11270 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11270 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_11275 PF00005 ABC transporter FIV03_11275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_11280 PF00005 ABC transporter FIV03_11280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_11290 PF01758 Sodium Bile acid symporter family FIV03_11295 PF07729 FCD domain FIV03_11295 PF00392 Bacterial regulatory proteins, gntR family FIV03_11300 PF01266 FAD dependent oxidoreductase FIV03_11320 PF17674 HHH domain FIV03_11320 PF00575 S1 RNA binding domain FIV03_11320 PF09371 Tex-like protein N-terminal domain FIV03_11320 PF16921 Tex protein YqgF-like domain FIV03_11330 PF14490 Helix-hairpin-helix containing domain FIV03_11330 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FIV03_11330 PF13538 UvrD-like helicase C-terminal domain FIV03_11335 PF01266 FAD dependent oxidoreductase FIV03_11355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_11355 PF03466 LysR substrate binding domain FIV03_11365 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV03_11365 PF01571 Aminomethyltransferase folate-binding domain FIV03_11365 PF16350 FAD dependent oxidoreductase central domain FIV03_11365 PF01266 FAD dependent oxidoreductase FIV03_11370 PF06253 Trimethylamine methyltransferase (MTTB) FIV03_11380 PF08402 TOBE domain FIV03_11380 PF00005 ABC transporter FIV03_11400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_11400 PF03466 LysR substrate binding domain FIV03_11405 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FIV03_11405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV03_11415 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_11435 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11440 PF00005 ABC transporter FIV03_11440 PF00571 CBS domain FIV03_11450 PF00005 ABC transporter FIV03_11455 PF00005 ABC transporter FIV03_11455 PF00664 ABC transporter transmembrane region FIV03_11465 PF02321 Outer membrane efflux protein FIV03_11470 PF00563 EAL domain FIV03_11470 PF00990 Diguanylate cyclase, GGDEF domain FIV03_11470 PF13188 PAS domain FIV03_11470 PF03707 Bacterial signalling protein N terminal repeat FIV03_11475 PF07729 FCD domain FIV03_11475 PF00392 Bacterial regulatory proteins, gntR family FIV03_11480 PF00356 Bacterial regulatory proteins, lacI family FIV03_11485 PF01547 Bacterial extracellular solute-binding protein FIV03_11490 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11495 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11500 PF17912 MalK OB fold domain FIV03_11500 PF03459 TOBE domain FIV03_11500 PF00005 ABC transporter FIV03_11515 PF00005 ABC transporter FIV03_11525 PF00245 Alkaline phosphatase FIV03_11530 PF00455 DeoR C terminal sensor domain FIV03_11530 PF08220 DeoR-like helix-turn-helix domain FIV03_11535 PF17912 MalK OB fold domain FIV03_11535 PF00005 ABC transporter FIV03_11540 PF13416 Bacterial extracellular solute-binding protein FIV03_11545 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11550 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11555 PF00294 pfkB family carbohydrate kinase FIV03_11560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_11560 PF00672 HAMP domain FIV03_11565 PF04962 KduI/IolB family FIV03_11570 PF01261 Xylose isomerase-like TIM barrel FIV03_11575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_11575 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_11575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_11580 PF00294 pfkB family carbohydrate kinase FIV03_11585 PF00005 ABC transporter FIV03_11590 PF02653 Branched-chain amino acid transport system / permease component FIV03_11605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_11605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_11610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_11610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_11615 PF02525 Flavodoxin-like fold FIV03_11620 PF00999 Sodium/hydrogen exchanger family FIV03_11620 PF02254 TrkA-N domain FIV03_11630 PF08532 Beta-galactosidase trimerisation domain FIV03_11630 PF08533 Beta-galactosidase C-terminal domain FIV03_11630 PF02449 Beta-galactosidase FIV03_11635 PF08450 SMP-30/Gluconolactonase/LRE-like region FIV03_11640 PF01081 KDPG and KHG aldolase FIV03_11645 PF05035 2-keto-3-deoxy-galactonokinase FIV03_11655 PF16875 Glycosyl hydrolase family 36 N-terminal domain FIV03_11655 PF16874 Glycosyl hydrolase family 36 C-terminal domain FIV03_11660 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11675 PF09339 IclR helix-turn-helix domain FIV03_11675 PF01614 Bacterial transcriptional regulator FIV03_11680 PF00005 ABC transporter FIV03_11680 PF17912 MalK OB fold domain FIV03_11690 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_11690 PF00005 ABC transporter FIV03_11695 PF00005 ABC transporter FIV03_11740 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_11740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_11740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_11745 PF01645 Conserved region in glutamate synthase FIV03_11760 PF00155 Aminotransferase class I and II FIV03_11765 PF17934 Tetracyclin repressor-like, C-terminal domain FIV03_11765 PF00440 Bacterial regulatory proteins, tetR family FIV03_11775 PF13193 AMP-binding enzyme C-terminal domain FIV03_11775 PF00501 AMP-binding enzyme FIV03_11780 PF01575 MaoC like domain FIV03_11785 PF01575 MaoC like domain FIV03_11795 PF13660 Domain of unknown function (DUF4147) FIV03_11795 PF05161 MOFRL family FIV03_11805 PF05025 RbsD / FucU transport protein family FIV03_11810 PF00356 Bacterial regulatory proteins, lacI family FIV03_11820 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11825 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11835 PF00005 ABC transporter FIV03_11835 PF08402 TOBE domain FIV03_11845 PF08379 Bacterial transglutaminase-like N-terminal region FIV03_11845 PF01841 Transglutaminase-like superfamily FIV03_11850 PF14403 Circularly permuted ATP-grasp type 2 FIV03_11850 PF04168 A predicted alpha-helical domain with a conserved ER motif. FIV03_11865 PF03301 Tryptophan 2,3-dioxygenase FIV03_11875 PF16363 GDP-mannose 4,6 dehydratase FIV03_11890 PF00005 ABC transporter FIV03_11890 PF17912 MalK OB fold domain FIV03_11895 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11900 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_11910 PF03965 Penicillinase repressor FIV03_11920 PF00708 Acylphosphatase FIV03_11920 PF01300 Telomere recombination FIV03_11920 PF17788 HypF Kae1-like domain FIV03_11920 PF07503 HypF finger FIV03_11925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV03_11925 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FIV03_11930 PF00037 4Fe-4S binding domain FIV03_11930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_11930 PF00384 Molybdopterin oxidoreductase FIV03_11930 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIV03_11930 PF01568 Molydopterin dinucleotide binding domain FIV03_11935 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FIV03_11940 PF00374 Nickel-dependent hydrogenase FIV03_11955 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FIV03_11960 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_11965 PF01455 HupF/HypC family FIV03_11970 PF01924 Hydrogenase formation hypA family FIV03_11975 PF00586 AIR synthase related protein, N-terminal domain FIV03_11975 PF02769 AIR synthase related protein, C-terminal domain FIV03_12015 PF01418 Helix-turn-helix domain, rpiR family FIV03_12015 PF01380 SIS domain FIV03_12030 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_12040 PF03951 Glutamine synthetase, beta-Grasp domain FIV03_12040 PF00120 Glutamine synthetase, catalytic domain FIV03_12045 PF00171 Aldehyde dehydrogenase family FIV03_12050 PF00465 Iron-containing alcohol dehydrogenase FIV03_12075 PF00144 Beta-lactamase FIV03_12080 PF11339 Protein of unknown function (DUF3141) FIV03_12090 PF10609 NUBPL iron-transfer P-loop NTPase FIV03_12130 PF01568 Molydopterin dinucleotide binding domain FIV03_12130 PF00384 Molybdopterin oxidoreductase FIV03_12130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_12135 PF13247 4Fe-4S dicluster domain FIV03_12145 PF00034 Cytochrome c FIV03_12155 PF12849 PBP superfamily domain FIV03_12160 PF00005 ABC transporter FIV03_12165 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12170 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_12180 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_12185 PF17391 Urocanase N-terminal domain FIV03_12185 PF17392 Urocanase C-terminal domain FIV03_12185 PF01175 Urocanase Rossmann-like domain FIV03_12195 PF00221 Aromatic amino acid lyase FIV03_12200 PF01979 Amidohydrolase family FIV03_12210 PF07702 UTRA domain FIV03_12210 PF00392 Bacterial regulatory proteins, gntR family FIV03_12230 PF03466 LysR substrate binding domain FIV03_12230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_12235 PF00596 Class II Aldolase and Adducin N-terminal domain FIV03_12240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_12245 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_12260 PF00486 Transcriptional regulatory protein, C terminal FIV03_12260 PF00072 Response regulator receiver domain FIV03_12265 PF08521 Two-component sensor kinase N-terminal FIV03_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_12265 PF00512 His Kinase A (phospho-acceptor) domain FIV03_12275 PF00149 Calcineurin-like phosphoesterase FIV03_12280 PF08402 TOBE domain FIV03_12280 PF00005 ABC transporter FIV03_12285 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12300 PF00356 Bacterial regulatory proteins, lacI family FIV03_12305 PF00593 TonB dependent receptor FIV03_12305 PF07715 TonB-dependent Receptor Plug Domain FIV03_12310 PF05171 Haemin-degrading HemS.ChuX domain FIV03_12320 PF01032 FecCD transport family FIV03_12325 PF00005 ABC transporter FIV03_12330 PF08534 Redoxin FIV03_12335 PF01232 Mannitol dehydrogenase Rossmann domain FIV03_12335 PF08125 Mannitol dehydrogenase C-terminal domain FIV03_12345 PF08402 TOBE domain FIV03_12345 PF00005 ABC transporter FIV03_12350 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12355 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12365 PF04198 Putative sugar-binding domain FIV03_12370 PF13419 Haloacid dehalogenase-like hydrolase FIV03_12375 PF07509 Protein of unknown function (DUF1523) FIV03_12405 PF12464 Maltose acetyltransferase FIV03_12405 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_12405 PF14602 Hexapeptide repeat of succinyl-transferase FIV03_12410 PF05853 beta-keto acid cleavage enzyme FIV03_12425 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV03_12440 PF02719 Polysaccharide biosynthesis protein FIV03_12445 PF00356 Bacterial regulatory proteins, lacI family FIV03_12455 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12460 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_12470 PF00005 ABC transporter FIV03_12470 PF03459 TOBE domain FIV03_12470 PF17912 MalK OB fold domain FIV03_12475 PF08402 TOBE domain FIV03_12475 PF00005 ABC transporter FIV03_12480 PF02734 DAK2 domain FIV03_12480 PF02733 Dak1 domain FIV03_12490 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_12500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_12505 PF00106 short chain dehydrogenase FIV03_12510 PF00378 Enoyl-CoA hydratase/isomerase FIV03_12515 PF12802 MarR family FIV03_12520 PF13193 AMP-binding enzyme C-terminal domain FIV03_12520 PF00501 AMP-binding enzyme FIV03_12535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_12535 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIV03_12535 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_12535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_12540 PF03466 LysR substrate binding domain FIV03_12540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_12545 PF07286 Protein of unknown function (DUF1445) FIV03_12560 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_12570 PF06055 Exopolysaccharide synthesis, ExoD FIV03_12585 PF07043 Protein of unknown function (DUF1328) FIV03_12590 PF10011 Predicted membrane protein (DUF2254) FIV03_12595 PF08281 Sigma-70, region 4 FIV03_12595 PF04542 Sigma-70 region 2 FIV03_12605 PF00072 Response regulator receiver domain FIV03_12610 PF05532 CsbD-like FIV03_12615 PF07536 HWE histidine kinase FIV03_12615 PF13426 PAS domain FIV03_12615 PF08447 PAS fold FIV03_12625 PF00210 Ferritin-like domain FIV03_12660 PF00072 Response regulator receiver domain FIV03_12675 PF00034 Cytochrome c FIV03_12680 PF00174 Oxidoreductase molybdopterin binding domain FIV03_12720 PF02683 Cytochrome C biogenesis protein transmembrane region FIV03_12745 PF04143 Sulphur transport FIV03_12765 PF00691 OmpA family FIV03_12765 PF05736 OprF membrane domain FIV03_12775 PF00691 OmpA family FIV03_12785 PF03786 D-mannonate dehydratase (UxuA) FIV03_12790 PF08125 Mannitol dehydrogenase C-terminal domain FIV03_12790 PF01232 Mannitol dehydrogenase Rossmann domain FIV03_12800 PF04962 KduI/IolB family FIV03_12805 PF07883 Cupin domain FIV03_12810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_12815 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV03_12820 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_12825 PF02614 Glucuronate isomerase FIV03_12830 PF07729 FCD domain FIV03_12830 PF00392 Bacterial regulatory proteins, gntR family FIV03_12835 PF00294 pfkB family carbohydrate kinase FIV03_12845 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_12850 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_12855 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_12865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_12870 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FIV03_12875 PF00171 Aldehyde dehydrogenase family FIV03_12885 PF01047 MarR family FIV03_12895 PF01270 Glycosyl hydrolases family 8 FIV03_12905 PF07238 PilZ domain FIV03_12905 PF00535 Glycosyl transferase family 2 FIV03_12905 PF03552 Cellulose synthase FIV03_12915 PF00202 Aminotransferase class-III FIV03_12920 PF13419 Haloacid dehalogenase-like hydrolase FIV03_12930 PF03401 Tripartite tricarboxylate transporter family receptor FIV03_12940 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_12945 PF00171 Aldehyde dehydrogenase family FIV03_12955 PF01266 FAD dependent oxidoreductase FIV03_12955 PF16350 FAD dependent oxidoreductase central domain FIV03_12955 PF01571 Aminomethyltransferase folate-binding domain FIV03_12955 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV03_12975 PF00300 Histidine phosphatase superfamily (branch 1) FIV03_12985 PF08402 TOBE domain FIV03_12985 PF00005 ABC transporter FIV03_12990 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_13000 PF00158 Sigma-54 interaction domain FIV03_13000 PF02954 Bacterial regulatory protein, Fis family FIV03_13000 PF00072 Response regulator receiver domain FIV03_13005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_13005 PF00512 His Kinase A (phospho-acceptor) domain FIV03_13005 PF02743 Cache domain FIV03_13015 PF00072 Response regulator receiver domain FIV03_13015 PF00486 Transcriptional regulatory protein, C terminal FIV03_13020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_13020 PF16736 Single Cache-like FIV03_13020 PF00512 His Kinase A (phospho-acceptor) domain FIV03_13020 PF00989 PAS fold FIV03_13030 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FIV03_13030 PF08479 POTRA domain, ShlB-type FIV03_13030 PF17287 POTRA domain FIV03_13035 PF00483 Nucleotidyl transferase FIV03_13045 PF12802 MarR family FIV03_13050 PF00005 ABC transporter FIV03_13050 PF00664 ABC transporter transmembrane region FIV03_13055 PF00529 HlyD membrane-fusion protein of T1SS FIV03_13070 PF08241 Methyltransferase domain FIV03_13105 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FIV03_13105 PF00535 Glycosyl transferase family 2 FIV03_13120 PF16363 GDP-mannose 4,6 dehydratase FIV03_13155 PF00106 short chain dehydrogenase FIV03_13165 PF01979 Amidohydrolase family FIV03_13170 PF00266 Aminotransferase class-V FIV03_13175 PF00005 ABC transporter FIV03_13180 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_13185 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_13190 PF00392 Bacterial regulatory proteins, gntR family FIV03_13190 PF07729 FCD domain FIV03_13195 PF13091 PLD-like domain FIV03_13200 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_13200 PF13378 Enolase C-terminal domain-like FIV03_13245 PF03963 Flagellar hook capping protein - N-terminal region FIV03_13255 PF01514 Secretory protein of YscJ/FliF family FIV03_13255 PF08345 Flagellar M-ring protein C-terminal FIV03_13260 PF14842 FliG N-terminal domain FIV03_13260 PF01706 FliG C-terminal domain FIV03_13260 PF14841 FliG middle domain FIV03_13270 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV03_13275 PF02954 Bacterial regulatory protein, Fis family FIV03_13275 PF00158 Sigma-54 interaction domain FIV03_13280 PF00771 FHIPEP family FIV03_13300 PF01008 Initiation factor 2 subunit family FIV03_13325 PF00293 NUDIX domain FIV03_13330 PF13409 Glutathione S-transferase, N-terminal domain FIV03_13355 PF07726 ATPase family associated with various cellular activities (AAA) FIV03_13355 PF17863 AAA lid domain FIV03_13365 PF00293 NUDIX domain FIV03_13375 PF01743 Poly A polymerase head domain FIV03_13375 PF13735 tRNA nucleotidyltransferase domain 2 putative FIV03_13375 PF12627 Probable RNA and SrmB- binding site of polymerase A FIV03_13380 PF01966 HD domain FIV03_13385 PF01218 Coproporphyrinogen III oxidase FIV03_13390 PF00588 SpoU rRNA Methylase family FIV03_13395 PF00664 ABC transporter transmembrane region FIV03_13395 PF00005 ABC transporter FIV03_13405 PF16591 Helical bimodular sensor domain FIV03_13405 PF00672 HAMP domain FIV03_13405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_13410 PF00990 Diguanylate cyclase, GGDEF domain FIV03_13420 PF00664 ABC transporter transmembrane region FIV03_13420 PF00005 ABC transporter FIV03_13425 PF00355 Rieske [2Fe-2S] domain FIV03_13425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FIV03_13430 PF00033 Cytochrome b/b6/petB FIV03_13430 PF00032 Cytochrome b(C-terminal)/b6/petD FIV03_13430 PF02167 Cytochrome C1 family FIV03_13435 PF00033 Cytochrome b/b6/petB FIV03_13435 PF02167 Cytochrome C1 family FIV03_13435 PF00032 Cytochrome b(C-terminal)/b6/petD FIV03_13445 PF01048 Phosphorylase superfamily FIV03_13450 PF00156 Phosphoribosyl transferase domain FIV03_13455 PF00881 Nitroreductase family FIV03_13460 PF00583 Acetyltransferase (GNAT) family FIV03_13475 PF16864 Dimerisation domain FIV03_13475 PF00891 O-methyltransferase domain FIV03_13490 PF01575 MaoC like domain FIV03_13500 PF16363 GDP-mannose 4,6 dehydratase FIV03_13510 PF03600 Citrate transporter FIV03_13510 PF02080 TrkA-C domain FIV03_13515 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_13520 PF00083 Sugar (and other) transporter FIV03_13520 PF08946 Osmosensory transporter coiled coil FIV03_13525 PF01926 50S ribosome-binding GTPase FIV03_13525 PF06071 Protein of unknown function (DUF933) FIV03_13540 PF01195 Peptidyl-tRNA hydrolase FIV03_13545 PF14693 Ribosomal protein TL5, C-terminal domain FIV03_13545 PF01386 Ribosomal L25p family FIV03_13555 PF03475 3-alpha domain FIV03_13555 PF03473 MOSC domain FIV03_13570 PF07969 Amidohydrolase family FIV03_13580 PF02653 Branched-chain amino acid transport system / permease component FIV03_13590 PF02608 ABC transporter substrate-binding protein PnrA-like FIV03_13595 PF14572 Phosphoribosyl synthetase-associated domain FIV03_13595 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FIV03_13605 PF01321 Creatinase/Prolidase N-terminal domain FIV03_13605 PF00557 Metallopeptidase family M24 FIV03_13620 PF01790 Prolipoprotein diacylglyceryl transferase FIV03_13635 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIV03_13635 PF03807 NADP oxidoreductase coenzyme F420-dependent FIV03_13640 PF05974 Domain of unknown function (DUF892) FIV03_13650 PF01588 Putative tRNA binding domain FIV03_13655 PF01979 Amidohydrolase family FIV03_13660 PF00672 HAMP domain FIV03_13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_13660 PF00512 His Kinase A (phospho-acceptor) domain FIV03_13665 PF00486 Transcriptional regulatory protein, C terminal FIV03_13665 PF00072 Response regulator receiver domain FIV03_13670 PF12802 MarR family FIV03_13675 PF01063 Amino-transferase class IV FIV03_13685 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_13685 PF08659 KR domain FIV03_13685 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_13685 PF14765 Polyketide synthase dehydratase FIV03_13685 PF16197 Ketoacyl-synthetase C-terminal extension FIV03_13685 PF00550 Phosphopantetheine attachment site FIV03_13685 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_13685 PF00698 Acyl transferase domain FIV03_13685 PF00107 Zinc-binding dehydrogenase FIV03_13690 PF07690 Major Facilitator Superfamily FIV03_13695 PF02391 MoaE protein FIV03_13705 PF01066 CDP-alcohol phosphatidyltransferase FIV03_13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_13720 PF03459 TOBE domain FIV03_13725 PF00795 Carbon-nitrogen hydrolase FIV03_13730 PF02311 AraC-like ligand binding domain FIV03_13730 PF12833 Helix-turn-helix domain FIV03_13735 PF01741 Large-conductance mechanosensitive channel, MscL FIV03_13740 PF00265 Thymidine kinase FIV03_13750 PF13181 Tetratricopeptide repeat FIV03_13755 PF13181 Tetratricopeptide repeat FIV03_13760 PF01541 GIY-YIG catalytic domain FIV03_13760 PF08459 UvrC Helix-hairpin-helix N-terminal FIV03_13760 PF02151 UvrB/uvrC motif FIV03_13765 PF01699 Sodium/calcium exchanger protein FIV03_13770 PF13505 Outer membrane protein beta-barrel domain FIV03_13780 PF00873 AcrB/AcrD/AcrF family FIV03_13785 PF00248 Aldo/keto reductase family FIV03_13800 PF16861 Carbamoyltransferase C-terminus FIV03_13800 PF02543 Carbamoyltransferase N-terminus FIV03_13810 PF00459 Inositol monophosphatase family FIV03_13820 PF00005 ABC transporter FIV03_13820 PF08402 TOBE domain FIV03_13825 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_13830 PF08220 DeoR-like helix-turn-helix domain FIV03_13830 PF00455 DeoR C terminal sensor domain FIV03_13835 PF00989 PAS fold FIV03_13835 PF00512 His Kinase A (phospho-acceptor) domain FIV03_13835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_13840 PF00072 Response regulator receiver domain FIV03_13840 PF00486 Transcriptional regulatory protein, C terminal FIV03_13850 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FIV03_13850 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FIV03_13855 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_13900 PF00043 Glutathione S-transferase, C-terminal domain FIV03_13900 PF02798 Glutathione S-transferase, N-terminal domain FIV03_13905 PF00445 Ribonuclease T2 family FIV03_13915 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FIV03_13925 PF00313 'Cold-shock' DNA-binding domain FIV03_13935 PF00753 Metallo-beta-lactamase superfamily FIV03_13950 PF00563 EAL domain FIV03_13950 PF13188 PAS domain FIV03_13950 PF03707 Bacterial signalling protein N terminal repeat FIV03_13950 PF00990 Diguanylate cyclase, GGDEF domain FIV03_13965 PF02617 ATP-dependent Clp protease adaptor protein ClpS FIV03_13970 PF16363 GDP-mannose 4,6 dehydratase FIV03_13975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV03_13980 PF02397 Bacterial sugar transferase FIV03_14000 PF00691 OmpA family FIV03_14010 PF01541 GIY-YIG catalytic domain FIV03_14015 PF00271 Helicase conserved C-terminal domain FIV03_14015 PF02151 UvrB/uvrC motif FIV03_14015 PF12344 Ultra-violet resistance protein B FIV03_14015 PF04851 Type III restriction enzyme, res subunit FIV03_14015 PF17757 UvrB interaction domain FIV03_14040 PF12151 Mannan-binding protein FIV03_14045 PF12411 Choline sulfatase enzyme C terminal FIV03_14045 PF00884 Sulfatase FIV03_14050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_14065 PF00440 Bacterial regulatory proteins, tetR family FIV03_14070 PF13411 MerR HTH family regulatory protein FIV03_14075 PF02627 Carboxymuconolactone decarboxylase family FIV03_14080 PF00672 HAMP domain FIV03_14080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_14150 PF14492 Elongation Factor G, domain II FIV03_14150 PF00009 Elongation factor Tu GTP binding domain FIV03_14150 PF00679 Elongation factor G C-terminus FIV03_14150 PF03764 Elongation factor G, domain IV FIV03_14155 PF00174 Oxidoreductase molybdopterin binding domain FIV03_14160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_14160 PF03466 LysR substrate binding domain FIV03_14165 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_14175 PF01037 Lrp/AsnC ligand binding domain FIV03_14190 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV03_14190 PF03449 Transcription elongation factor, N-terminal FIV03_14195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV03_14195 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FIV03_14195 PF02142 MGS-like domain FIV03_14205 PF00376 MerR family regulatory protein FIV03_14205 PF09278 MerR, DNA binding FIV03_14210 PF00117 Glutamine amidotransferase class-I FIV03_14210 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FIV03_14220 PF13662 Toprim domain FIV03_14220 PF08275 DNA primase catalytic core, N-terminal domain FIV03_14220 PF01807 CHC2 zinc finger FIV03_14220 PF08278 DNA primase DnaG DnaB-binding FIV03_14220 PF10410 DnaB-helicase binding domain of primase FIV03_14225 PF00140 Sigma-70 factor, region 1.2 FIV03_14225 PF04542 Sigma-70 region 2 FIV03_14225 PF04539 Sigma-70 region 3 FIV03_14225 PF04545 Sigma-70, region 4 FIV03_14225 PF04546 Sigma-70, non-essential region FIV03_14225 PF03979 Sigma-70 factor, region 1.1 FIV03_14250 PF00083 Sugar (and other) transporter FIV03_14255 PF07690 Major Facilitator Superfamily FIV03_14260 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family FIV03_14285 PF00440 Bacterial regulatory proteins, tetR family FIV03_14285 PF16925 Tetracyclin repressor-like, C-terminal domain FIV03_14290 PF00106 short chain dehydrogenase FIV03_14300 PF02773 S-adenosylmethionine synthetase, C-terminal domain FIV03_14300 PF00438 S-adenosylmethionine synthetase, N-terminal domain FIV03_14300 PF02772 S-adenosylmethionine synthetase, central domain FIV03_14305 PF08241 Methyltransferase domain FIV03_14305 PF13649 Methyltransferase domain FIV03_14310 PF00378 Enoyl-CoA hydratase/isomerase FIV03_14315 PF00440 Bacterial regulatory proteins, tetR family FIV03_14320 PF07729 FCD domain FIV03_14320 PF00392 Bacterial regulatory proteins, gntR family FIV03_14325 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_14335 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_14345 PF00920 Dehydratase family FIV03_14350 PF03737 Aldolase/RraA FIV03_14355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_14360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_14370 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_14375 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FIV03_14375 PF08501 Shikimate dehydrogenase substrate binding domain FIV03_14380 PF17938 Tetracyclin repressor-like, C-terminal domain FIV03_14380 PF00440 Bacterial regulatory proteins, tetR family FIV03_14405 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIV03_14405 PF01266 FAD dependent oxidoreductase FIV03_14425 PF01594 AI-2E family transporter FIV03_14470 PF07687 Peptidase dimerisation domain FIV03_14470 PF01546 Peptidase family M20/M25/M40 FIV03_14475 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_14480 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_14485 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_14490 PF00005 ABC transporter FIV03_14495 PF13977 BetI-type transcriptional repressor, C-terminal FIV03_14495 PF00440 Bacterial regulatory proteins, tetR family FIV03_14500 PF00155 Aminotransferase class I and II FIV03_14505 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_14505 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_14505 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_14510 PF00672 HAMP domain FIV03_14510 PF00072 Response regulator receiver domain FIV03_14510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FIV03_14510 PF01627 Hpt domain FIV03_14510 PF00512 His Kinase A (phospho-acceptor) domain FIV03_14510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_14515 PF00196 Bacterial regulatory proteins, luxR family FIV03_14515 PF00072 Response regulator receiver domain FIV03_14530 PF12034 Domain of unknown function (DUF3520) FIV03_14530 PF12450 von Willebrand factor FIV03_14530 PF00092 von Willebrand factor type A domain FIV03_14545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_14545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_14555 PF05853 beta-keto acid cleavage enzyme FIV03_14560 PF00378 Enoyl-CoA hydratase/isomerase FIV03_14570 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_14570 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_14570 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_14575 PF01965 DJ-1/PfpI family FIV03_14575 PF12833 Helix-turn-helix domain FIV03_14585 PF04542 Sigma-70 region 2 FIV03_14585 PF08281 Sigma-70, region 4 FIV03_14590 PF03466 LysR substrate binding domain FIV03_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_14595 PF02525 Flavodoxin-like fold FIV03_14670 PF00005 ABC transporter FIV03_14680 PF02653 Branched-chain amino acid transport system / permease component FIV03_14695 PF07687 Peptidase dimerisation domain FIV03_14695 PF01546 Peptidase family M20/M25/M40 FIV03_14700 PF01047 MarR family FIV03_14700 PF00480 ROK family FIV03_14725 PF01965 DJ-1/PfpI family FIV03_14725 PF12833 Helix-turn-helix domain FIV03_14875 PF00959 Phage lysozyme FIV03_14895 PF02525 Flavodoxin-like fold FIV03_14905 PF01810 LysE type translocator FIV03_14935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_14935 PF00672 HAMP domain FIV03_14940 PF05378 Hydantoinase/oxoprolinase N-terminal region FIV03_14940 PF01968 Hydantoinase/oxoprolinase FIV03_14965 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_14980 PF03960 ArsC family FIV03_14985 PF03358 NADPH-dependent FMN reductase FIV03_14990 PF03707 Bacterial signalling protein N terminal repeat FIV03_14990 PF13188 PAS domain FIV03_14990 PF00990 Diguanylate cyclase, GGDEF domain FIV03_14990 PF00563 EAL domain FIV03_14995 PF00226 DnaJ domain FIV03_14995 PF05099 Tellurite resistance protein TerB FIV03_15000 PF01510 N-acetylmuramoyl-L-alanine amidase FIV03_15015 PF00155 Aminotransferase class I and II FIV03_15015 PF00392 Bacterial regulatory proteins, gntR family FIV03_15020 PF01144 Coenzyme A transferase FIV03_15025 PF01144 Coenzyme A transferase FIV03_15045 PF01593 Flavin containing amine oxidoreductase FIV03_15055 PF12833 Helix-turn-helix domain FIV03_15055 PF14525 AraC-binding-like domain FIV03_15060 PF02381 MraZ protein, putative antitoxin-like FIV03_15065 PF01795 MraW methylase family FIV03_15075 PF00905 Penicillin binding protein transpeptidase domain FIV03_15075 PF03717 Penicillin-binding Protein dimerisation domain FIV03_15080 PF01225 Mur ligase family, catalytic domain FIV03_15080 PF08245 Mur ligase middle domain FIV03_15080 PF02875 Mur ligase family, glutamate ligase domain FIV03_15085 PF08245 Mur ligase middle domain FIV03_15085 PF02875 Mur ligase family, glutamate ligase domain FIV03_15085 PF01225 Mur ligase family, catalytic domain FIV03_15090 PF00953 Glycosyl transferase family 4 FIV03_15090 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FIV03_15095 PF08245 Mur ligase middle domain FIV03_15100 PF01098 Cell cycle protein FIV03_15105 PF04101 Glycosyltransferase family 28 C-terminal domain FIV03_15105 PF03033 Glycosyltransferase family 28 N-terminal domain FIV03_15110 PF02875 Mur ligase family, glutamate ligase domain FIV03_15110 PF08245 Mur ligase middle domain FIV03_15110 PF01225 Mur ligase family, catalytic domain FIV03_15115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FIV03_15115 PF01565 FAD binding domain FIV03_15120 PF01820 D-ala D-ala ligase N-terminus FIV03_15120 PF07478 D-ala D-ala ligase C-terminus FIV03_15125 PF03799 Cell division protein FtsQ FIV03_15125 PF08478 POTRA domain, FtsQ-type FIV03_15130 PF02491 SHS2 domain inserted in FTSA FIV03_15135 PF12327 FtsZ family, C-terminal domain FIV03_15135 PF00091 Tubulin/FtsZ family, GTPase domain FIV03_15140 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FIV03_15145 PF13525 Outer membrane lipoprotein FIV03_15150 PF02463 RecF/RecN/SMC N terminal domain FIV03_15160 PF01653 NAD-dependent DNA ligase adenylation domain FIV03_15160 PF03120 NAD-dependent DNA ligase OB-fold domain FIV03_15160 PF00533 BRCA1 C Terminus (BRCT) domain FIV03_15160 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FIV03_15160 PF12826 Helix-hairpin-helix motif FIV03_15170 PF13361 UvrD-like helicase C-terminal domain FIV03_15170 PF00580 UvrD/REP helicase N-terminal domain FIV03_15190 PF00557 Metallopeptidase family M24 FIV03_15190 PF01321 Creatinase/Prolidase N-terminal domain FIV03_15190 PF01321 Creatinase/Prolidase N-terminal domain FIV03_15190 PF00557 Metallopeptidase family M24 FIV03_15200 PF00654 Voltage gated chloride channel FIV03_15205 PF00654 Voltage gated chloride channel FIV03_15215 PF01565 FAD binding domain FIV03_15215 PF02913 FAD linked oxidases, C-terminal domain FIV03_15240 PF00303 Thymidylate synthase FIV03_15245 PF07731 Multicopper oxidase FIV03_15245 PF07732 Multicopper oxidase FIV03_15255 PF00232 Glycosyl hydrolase family 1 FIV03_15270 PF00186 Dihydrofolate reductase FIV03_15275 PF13673 Acetyltransferase (GNAT) domain FIV03_15280 PF12221 Bacterial membrane protein N terminal FIV03_15280 PF01145 SPFH domain / Band 7 family FIV03_15285 PF01145 SPFH domain / Band 7 family FIV03_15295 PF13180 PDZ domain FIV03_15335 PF08502 LeuA allosteric (dimerisation) domain FIV03_15335 PF00682 HMGL-like FIV03_15340 PF00072 Response regulator receiver domain FIV03_15345 PF01627 Hpt domain FIV03_15345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_15345 PF00512 His Kinase A (phospho-acceptor) domain FIV03_15345 PF00672 HAMP domain FIV03_15345 PF00072 Response regulator receiver domain FIV03_15345 PF17149 Periplasmic sensor domain found in signal transduction proteins FIV03_15365 PF01022 Bacterial regulatory protein, arsR family FIV03_15380 PF06719 AraC-type transcriptional regulator N-terminus FIV03_15380 PF12833 Helix-turn-helix domain FIV03_15385 PF02567 Phenazine biosynthesis-like protein FIV03_15395 PF02678 Pirin FIV03_15395 PF05726 Pirin C-terminal cupin domain FIV03_15400 PF00005 ABC transporter FIV03_15405 PF00583 Acetyltransferase (GNAT) family FIV03_15410 PF01061 ABC-2 type transporter FIV03_15415 PF07943 Penicillin-binding protein 5, C-terminal domain FIV03_15415 PF00768 D-alanyl-D-alanine carboxypeptidase FIV03_15420 PF07694 5TMR of 5TMR-LYT FIV03_15420 PF00990 Diguanylate cyclase, GGDEF domain FIV03_15425 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FIV03_15425 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FIV03_15445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_15445 PF03466 LysR substrate binding domain FIV03_15465 PF01965 DJ-1/PfpI family FIV03_15475 PF13632 Glycosyl transferase family group 2 FIV03_15485 PF04349 Periplasmic glucan biosynthesis protein, MdoG FIV03_15490 PF01266 FAD dependent oxidoreductase FIV03_15495 PF01425 Amidase FIV03_15505 PF02686 Glu-tRNAGln amidotransferase C subunit FIV03_15530 PF08021 Siderophore-interacting FAD-binding domain FIV03_15530 PF04954 Siderophore-interacting protein FIV03_15540 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_15545 PF01037 Lrp/AsnC ligand binding domain FIV03_15550 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV03_15550 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_15565 PF01810 LysE type translocator FIV03_15575 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FIV03_15585 PF04134 Protein of unknown function, DUF393 FIV03_15590 PF17158 Membrane-associated sensor, integral membrane domain FIV03_15590 PF00990 Diguanylate cyclase, GGDEF domain FIV03_15595 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_15595 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_15610 PF10369 Small subunit of acetolactate synthase FIV03_15615 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_15615 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_15615 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_15875 PF00672 HAMP domain FIV03_15875 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_15875 PF16591 Helical bimodular sensor domain FIV03_15900 PF08450 SMP-30/Gluconolactonase/LRE-like region FIV03_15905 PF01037 Lrp/AsnC ligand binding domain FIV03_15910 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV03_15910 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV03_15935 PF00342 Phosphoglucose isomerase FIV03_15955 PF05532 CsbD-like FIV03_15960 PF01081 KDPG and KHG aldolase FIV03_15965 PF00920 Dehydratase family FIV03_15970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FIV03_15970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FIV03_15975 PF00294 pfkB family carbohydrate kinase FIV03_15985 PF00005 ABC transporter FIV03_15990 PF02653 Branched-chain amino acid transport system / permease component FIV03_15995 PF13407 Periplasmic binding protein domain FIV03_16005 PF13382 Adenine deaminase C-terminal domain FIV03_16005 PF01979 Amidohydrolase family FIV03_16020 PF13193 AMP-binding enzyme C-terminal domain FIV03_16020 PF00501 AMP-binding enzyme FIV03_16035 PF00892 EamA-like transporter family FIV03_16045 PF08443 RimK-like ATP-grasp domain FIV03_16045 PF18030 RimK PreATP-grasp domain FIV03_16050 PF08443 RimK-like ATP-grasp domain FIV03_16050 PF18030 RimK PreATP-grasp domain FIV03_16055 PF08241 Methyltransferase domain FIV03_16060 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_16060 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_16065 PF05992 SbmA/BacA-like family FIV03_16085 PF02899 Phage integrase, N-terminal SAM-like domain FIV03_16085 PF00589 Phage integrase family FIV03_16115 PF18766 SWI2/SNF2 ATPase FIV03_16115 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FIV03_16115 PF11867 Domain of unknown function (DUF3387) FIV03_16120 PF01420 Type I restriction modification DNA specificity domain FIV03_16125 PF12161 HsdM N-terminal domain FIV03_16125 PF02384 N-6 DNA Methylase FIV03_16140 PF02110 Hydroxyethylthiazole kinase family FIV03_16145 PF08543 Phosphomethylpyrimidine kinase FIV03_16150 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_16160 PF00106 short chain dehydrogenase FIV03_16170 PF13439 Glycosyltransferase Family 4 FIV03_16175 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_16190 PF12832 MFS_1 like family FIV03_16195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_16195 PF13378 Enolase C-terminal domain-like FIV03_16205 PF02405 Permease MlaE FIV03_16210 PF00005 ABC transporter FIV03_16230 PF00106 short chain dehydrogenase FIV03_16235 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_16245 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_16275 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_16295 PF00582 Universal stress protein family FIV03_16330 PF05128 Domain of unknown function (DUF697) FIV03_16335 PF04317 YcjX-like family, DUF463 FIV03_16350 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_16350 PF01434 Peptidase family M41 FIV03_16350 PF17862 AAA+ lid domain FIV03_16355 PF00460 Flagella basal body rod protein FIV03_16355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_16355 PF07559 Flagellar basal body protein FlaE FIV03_16385 PF05199 GMC oxidoreductase FIV03_16385 PF00732 GMC oxidoreductase FIV03_16395 PF07378 Flagellar protein FlbT FIV03_16400 PF00669 Bacterial flagellin N-terminal helical region FIV03_16400 PF00700 Bacterial flagellin C-terminal helical region FIV03_16410 PF00669 Bacterial flagellin N-terminal helical region FIV03_16410 PF00700 Bacterial flagellin C-terminal helical region FIV03_16425 PF10135 Rod binding protein FIV03_16430 PF02119 Flagellar P-ring protein FIV03_16440 PF10768 Class II flagellar assembly regulator FIV03_16445 PF01258 Prokaryotic dksA/traR C4-type zinc finger FIV03_16450 PF02872 5'-nucleotidase, C-terminal domain FIV03_16450 PF00149 Calcineurin-like phosphoesterase FIV03_16465 PF02525 Flavodoxin-like fold FIV03_16470 PF02107 Flagellar L-ring protein FIV03_16480 PF00460 Flagella basal body rod protein FIV03_16480 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_16485 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_16485 PF00460 Flagella basal body rod protein FIV03_16495 PF02154 Flagellar motor switch protein FliM FIV03_16495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV03_16525 PF00813 FliP family FIV03_16535 PF00460 Flagella basal body rod protein FIV03_16540 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_16545 PF02049 Flagellar hook-basal body complex protein FliE FIV03_16550 PF01313 Bacterial export proteins, family 3 FIV03_16555 PF01311 Bacterial export proteins, family 1 FIV03_16560 PF01312 FlhB HrpN YscU SpaS Family FIV03_16565 PF00072 Response regulator receiver domain FIV03_16565 PF13188 PAS domain FIV03_16565 PF08448 PAS fold FIV03_16565 PF00512 His Kinase A (phospho-acceptor) domain FIV03_16565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_16575 PF02417 Chromate transporter FIV03_16600 PF01066 CDP-alcohol phosphatidyltransferase FIV03_16605 PF00561 alpha/beta hydrolase fold FIV03_16610 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_16620 PF02515 CoA-transferase family III FIV03_16625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_16625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_16625 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_16630 PF03466 LysR substrate binding domain FIV03_16640 PF06940 Domain of unknown function (DUF1287) FIV03_16645 PF00563 EAL domain FIV03_16645 PF00990 Diguanylate cyclase, GGDEF domain FIV03_16645 PF03707 Bacterial signalling protein N terminal repeat FIV03_16650 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_16655 PF00072 Response regulator receiver domain FIV03_16655 PF00196 Bacterial regulatory proteins, luxR family FIV03_16660 PF00501 AMP-binding enzyme FIV03_16660 PF13193 AMP-binding enzyme C-terminal domain FIV03_16675 PF00857 Isochorismatase family FIV03_16680 PF16750 Sensor domain of 2-component histidine kinase FIV03_16680 PF00512 His Kinase A (phospho-acceptor) domain FIV03_16680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_16680 PF00672 HAMP domain FIV03_16685 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV03_16685 PF12833 Helix-turn-helix domain FIV03_16690 PF00440 Bacterial regulatory proteins, tetR family FIV03_16720 PF01965 DJ-1/PfpI family FIV03_16735 PF13192 Thioredoxin domain FIV03_16735 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_16745 PF02798 Glutathione S-transferase, N-terminal domain FIV03_16745 PF00043 Glutathione S-transferase, C-terminal domain FIV03_16760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_16765 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_16770 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_16775 PF01476 LysM domain FIV03_16775 PF04972 BON domain FIV03_16780 PF00892 EamA-like transporter family FIV03_16785 PF00155 Aminotransferase class I and II FIV03_16805 PF01370 NAD dependent epimerase/dehydratase family FIV03_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_16815 PF03466 LysR substrate binding domain FIV03_16825 PF13409 Glutathione S-transferase, N-terminal domain FIV03_16830 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV03_16830 PF12833 Helix-turn-helix domain FIV03_16845 PF13186 Iron-sulfur cluster-binding domain FIV03_16845 PF04055 Radical SAM superfamily FIV03_16850 PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit FIV03_16860 PF00664 ABC transporter transmembrane region FIV03_16860 PF00005 ABC transporter FIV03_16875 PF02634 FdhD/NarQ family FIV03_16880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIV03_16880 PF01568 Molydopterin dinucleotide binding domain FIV03_16880 PF12838 4Fe-4S dicluster domain FIV03_16880 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_16880 PF00384 Molybdopterin oxidoreductase FIV03_16885 PF00037 4Fe-4S binding domain FIV03_16885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FIV03_16885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV03_16895 PF03466 LysR substrate binding domain FIV03_16895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_16910 PF00440 Bacterial regulatory proteins, tetR family FIV03_16940 PF00924 Mechanosensitive ion channel FIV03_16940 PF12795 Mechanosensitive ion channel porin domain FIV03_16940 PF12794 Mechanosensitive ion channel inner membrane domain 1 FIV03_16945 PF04227 Indigoidine synthase A like protein FIV03_16950 PF00294 pfkB family carbohydrate kinase FIV03_16960 PF01555 DNA methylase FIV03_16975 PF00154 recA bacterial DNA recombination protein FIV03_16980 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV03_16980 PF01411 tRNA synthetases class II (A) FIV03_16980 PF02272 DHHA1 domain FIV03_16990 PF00520 Ion transport protein FIV03_16990 PF00027 Cyclic nucleotide-binding domain FIV03_17000 PF00043 Glutathione S-transferase, C-terminal domain FIV03_17000 PF13417 Glutathione S-transferase, N-terminal domain FIV03_17005 PF03649 Uncharacterised protein family (UPF0014) FIV03_17010 PF00005 ABC transporter FIV03_17015 PF00180 Isocitrate/isopropylmalate dehydrogenase FIV03_17025 PF07690 Major Facilitator Superfamily FIV03_17030 PF13426 PAS domain FIV03_17030 PF00563 EAL domain FIV03_17030 PF00990 Diguanylate cyclase, GGDEF domain FIV03_17035 PF01817 Chorismate mutase type II FIV03_17060 PF12833 Helix-turn-helix domain FIV03_17060 PF12852 Cupin FIV03_17070 PF01047 MarR family FIV03_17075 PF00561 alpha/beta hydrolase fold FIV03_17085 PF03971 Monomeric isocitrate dehydrogenase FIV03_17090 PF13188 PAS domain FIV03_17090 PF00990 Diguanylate cyclase, GGDEF domain FIV03_17090 PF00563 EAL domain FIV03_17090 PF03707 Bacterial signalling protein N terminal repeat FIV03_17105 PF00588 SpoU rRNA Methylase family FIV03_17110 PF01177 Asp/Glu/Hydantoin racemase FIV03_17115 PF00563 EAL domain FIV03_17115 PF12792 CSS motif domain associated with EAL FIV03_17120 PF01479 S4 domain FIV03_17120 PF00163 Ribosomal protein S4/S9 N-terminal domain FIV03_17125 PF04972 BON domain FIV03_17125 PF01476 LysM domain FIV03_17140 PF16347 Domain of unknown function (DUF4976) FIV03_17140 PF00884 Sulfatase FIV03_17145 PF03466 LysR substrate binding domain FIV03_17145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_17150 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_17160 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_17165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FIV03_17170 PF13378 Enolase C-terminal domain-like FIV03_17170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_17175 PF00701 Dihydrodipicolinate synthetase family FIV03_17180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_17180 PF03466 LysR substrate binding domain FIV03_17185 PF01261 Xylose isomerase-like TIM barrel FIV03_17190 PF00596 Class II Aldolase and Adducin N-terminal domain FIV03_17195 PF08220 DeoR-like helix-turn-helix domain FIV03_17195 PF00455 DeoR C terminal sensor domain FIV03_17200 PF13407 Periplasmic binding protein domain FIV03_17205 PF00005 ABC transporter FIV03_17210 PF02653 Branched-chain amino acid transport system / permease component FIV03_17215 PF02653 Branched-chain amino acid transport system / permease component FIV03_17220 PF05336 L-rhamnose mutarotase FIV03_17230 PF01171 PP-loop family FIV03_17235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_17235 PF03466 LysR substrate binding domain FIV03_17240 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV03_17240 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV03_17245 PF00171 Aldehyde dehydrogenase family FIV03_17250 PF03734 L,D-transpeptidase catalytic domain FIV03_17250 PF17969 L,D-transpeptidase C-terminal domain FIV03_17250 PF01476 LysM domain FIV03_17270 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_17270 PF00672 HAMP domain FIV03_17280 PF00462 Glutaredoxin FIV03_17290 PF02769 AIR synthase related protein, C-terminal domain FIV03_17290 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FIV03_17290 PF00586 AIR synthase related protein, N-terminal domain FIV03_17300 PF01699 Sodium/calcium exchanger protein FIV03_17315 PF00392 Bacterial regulatory proteins, gntR family FIV03_17315 PF00155 Aminotransferase class I and II FIV03_17330 PF02311 AraC-like ligand binding domain FIV03_17330 PF12833 Helix-turn-helix domain FIV03_17345 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FIV03_17355 PF01259 SAICAR synthetase FIV03_17365 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_17395 PF10397 Adenylosuccinate lyase C-terminus FIV03_17395 PF00206 Lyase FIV03_17405 PF13520 Amino acid permease FIV03_17410 PF01541 GIY-YIG catalytic domain FIV03_17415 PF00834 Ribulose-phosphate 3 epimerase family FIV03_17430 PF01266 FAD dependent oxidoreductase FIV03_17435 PF01037 Lrp/AsnC ligand binding domain FIV03_17455 PF00924 Mechanosensitive ion channel FIV03_17470 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_17480 PF00005 ABC transporter FIV03_17485 PF03551 Transcriptional regulator PadR-like family FIV03_17485 PF13847 Methyltransferase domain FIV03_17490 PF02219 Methylenetetrahydrofolate reductase FIV03_17500 PF02965 Vitamin B12 dependent methionine synthase, activation domain FIV03_17500 PF00809 Pterin binding enzyme FIV03_17500 PF02607 B12 binding domain FIV03_17500 PF02574 Homocysteine S-methyltransferase FIV03_17500 PF02310 B12 binding domain FIV03_17535 PF01494 FAD binding domain FIV03_17540 PF00672 HAMP domain FIV03_17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_17540 PF00512 His Kinase A (phospho-acceptor) domain FIV03_17545 PF00486 Transcriptional regulatory protein, C terminal FIV03_17545 PF00072 Response regulator receiver domain FIV03_17575 PF01497 Periplasmic binding protein FIV03_17580 PF01032 FecCD transport family FIV03_17585 PF01032 FecCD transport family FIV03_17590 PF00005 ABC transporter FIV03_17610 PF00486 Transcriptional regulatory protein, C terminal FIV03_17610 PF00072 Response regulator receiver domain FIV03_17615 PF00989 PAS fold FIV03_17615 PF00672 HAMP domain FIV03_17615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_17615 PF00512 His Kinase A (phospho-acceptor) domain FIV03_17615 PF18698 Histidine kinase sensor domain FIV03_17620 PF03466 LysR substrate binding domain FIV03_17620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_17625 PF02798 Glutathione S-transferase, N-terminal domain FIV03_17630 PF00970 Oxidoreductase FAD-binding domain FIV03_17630 PF00175 Oxidoreductase NAD-binding domain FIV03_17630 PF00042 Globin FIV03_17640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FIV03_17640 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FIV03_17650 PF16653 Saccharopine dehydrogenase C-terminal domain FIV03_17650 PF03435 Saccharopine dehydrogenase NADP binding domain FIV03_17665 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_17670 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_17675 PF01740 STAS domain FIV03_17675 PF00916 Sulfate permease family FIV03_17700 PF00155 Aminotransferase class I and II FIV03_17730 PF00440 Bacterial regulatory proteins, tetR family FIV03_17735 PF01470 Pyroglutamyl peptidase FIV03_17755 PF03641 Possible lysine decarboxylase FIV03_17765 PF00924 Mechanosensitive ion channel FIV03_17775 PF05872 Bacterial protein of unknown function (DUF853) FIV03_17790 PF00196 Bacterial regulatory proteins, luxR family FIV03_17790 PF03472 Autoinducer binding domain FIV03_17795 PF01642 Methylmalonyl-CoA mutase FIV03_17800 PF02310 B12 binding domain FIV03_17800 PF01642 Methylmalonyl-CoA mutase FIV03_17815 PF13443 Cro/C1-type HTH DNA-binding domain FIV03_17835 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_17845 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_17860 PF01063 Amino-transferase class IV FIV03_17865 PF06779 Uncharacterised MFS-type transporter YbfB FIV03_17870 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FIV03_17870 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FIV03_17880 PF00034 Cytochrome c FIV03_17890 PF01042 Endoribonuclease L-PSP FIV03_17905 PF03466 LysR substrate binding domain FIV03_17905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_17915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FIV03_17915 PF00326 Prolyl oligopeptidase family FIV03_17930 PF00005 ABC transporter FIV03_17940 PF01032 FecCD transport family FIV03_17955 PF05368 NmrA-like family FIV03_17960 PF01638 HxlR-like helix-turn-helix FIV03_17970 PF01641 SelR domain FIV03_17985 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FIV03_17990 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FIV03_18005 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FIV03_18010 PF03334 Na+/H+ antiporter subunit FIV03_18015 PF05443 ROS/MUCR transcriptional regulator protein FIV03_18020 PF02657 Fe-S metabolism associated domain FIV03_18025 PF17264 Family of unknown function (DUF5330) FIV03_18060 PF13181 Tetratricopeptide repeat FIV03_18075 PF00912 Transglycosylase FIV03_18075 PF00905 Penicillin binding protein transpeptidase domain FIV03_18080 PF03692 Putative zinc- or iron-chelating domain FIV03_18095 PF01464 Transglycosylase SLT domain FIV03_18105 PF03576 Peptidase family S58 FIV03_18110 PF01613 Flavin reductase like domain FIV03_18115 PF13458 Periplasmic binding protein FIV03_18120 PF04264 YceI-like domain FIV03_18125 PF03734 L,D-transpeptidase catalytic domain FIV03_18125 PF01476 LysM domain FIV03_18125 PF17969 L,D-transpeptidase C-terminal domain FIV03_18150 PF06233 Usg-like family FIV03_18165 PF00348 Polyprenyl synthetase FIV03_18170 PF08544 GHMP kinases C terminal FIV03_18170 PF00288 GHMP kinases N terminal domain FIV03_18180 PF02896 PEP-utilising enzyme, TIM barrel domain FIV03_18180 PF00391 PEP-utilising enzyme, mobile domain FIV03_18180 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FIV03_18190 PF13188 PAS domain FIV03_18190 PF00990 Diguanylate cyclase, GGDEF domain FIV03_18190 PF03707 Bacterial signalling protein N terminal repeat FIV03_18190 PF00563 EAL domain FIV03_18195 PF04002 RadC-like JAB domain FIV03_18200 PF00557 Metallopeptidase family M24 FIV03_18210 PF07969 Amidohydrolase family FIV03_18215 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_18220 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_18230 PF00005 ABC transporter FIV03_18240 PF00005 ABC transporter FIV03_18245 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_18255 PF05343 M42 glutamyl aminopeptidase FIV03_18260 PF04262 Glutamate-cysteine ligase FIV03_18260 PF18419 ATP-grasp-like domain FIV03_18260 PF02655 ATP-grasp domain FIV03_18265 PF13537 Glutamine amidotransferase domain FIV03_18265 PF00733 Asparagine synthase FIV03_18270 PF01047 MarR family FIV03_18275 PF00563 EAL domain FIV03_18275 PF00990 Diguanylate cyclase, GGDEF domain FIV03_18275 PF03707 Bacterial signalling protein N terminal repeat FIV03_18280 PF02386 Cation transport protein FIV03_18285 PF03749 Sugar fermentation stimulation protein RE domain FIV03_18285 PF17746 SfsA N-terminal OB domain FIV03_18290 PF03734 L,D-transpeptidase catalytic domain FIV03_18290 PF17969 L,D-transpeptidase C-terminal domain FIV03_18295 PF00156 Phosphoribosyl transferase domain FIV03_18300 PF18146 Damage-inducible protein CinA KH domain FIV03_18300 PF02464 Competence-damaged protein FIV03_18300 PF00994 Probable molybdopterin binding domain FIV03_18305 PF01494 FAD binding domain FIV03_18315 PF12697 Alpha/beta hydrolase family FIV03_18325 PF00378 Enoyl-CoA hydratase/isomerase FIV03_18330 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_18330 PF06426 Serine acetyltransferase, N-terminal FIV03_18350 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_18375 PF00571 CBS domain FIV03_18380 PF03264 NapC/NirT cytochrome c family, N-terminal region FIV03_18385 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FIV03_18390 PF00384 Molybdopterin oxidoreductase FIV03_18390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_18390 PF01568 Molydopterin dinucleotide binding domain FIV03_18400 PF06796 Periplasmic nitrate reductase protein NapE FIV03_18405 PF01502 Phosphoribosyl-AMP cyclohydrolase FIV03_18410 PF01227 GTP cyclohydrolase I FIV03_18420 PF01809 Putative membrane protein insertion efficiency factor FIV03_18425 PF02310 B12 binding domain FIV03_18425 PF13282 Domain of unknown function (DUF4070) FIV03_18425 PF04055 Radical SAM superfamily FIV03_18435 PF01037 Lrp/AsnC ligand binding domain FIV03_18440 PF00583 Acetyltransferase (GNAT) family FIV03_18445 PF08443 RimK-like ATP-grasp domain FIV03_18445 PF18030 RimK PreATP-grasp domain FIV03_18450 PF03129 Anticodon binding domain FIV03_18450 PF02824 TGS domain FIV03_18450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV03_18450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV03_18470 PF01613 Flavin reductase like domain FIV03_18505 PF01513 ATP-NAD kinase FIV03_18510 PF00089 Trypsin FIV03_18515 PF00884 Sulfatase FIV03_18515 PF16347 Domain of unknown function (DUF4976) FIV03_18520 PF13419 Haloacid dehalogenase-like hydrolase FIV03_18530 PF03466 LysR substrate binding domain FIV03_18530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_18535 PF01425 Amidase FIV03_18545 PF08376 Nitrate and nitrite sensing FIV03_18545 PF03861 ANTAR domain FIV03_18550 PF00005 ABC transporter FIV03_18555 PF00005 ABC transporter FIV03_18560 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_18565 PF00005 ABC transporter FIV03_18570 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV03_18570 PF18267 Rubredoxin NAD+ reductase C-terminal domain FIV03_18570 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_18570 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FIV03_18570 PF04324 BFD-like [2Fe-2S] binding domain FIV03_18585 PF00069 Protein kinase domain FIV03_18585 PF03793 PASTA domain FIV03_18590 PF02560 Cyanate lyase C-terminal domain FIV03_18595 PF01568 Molydopterin dinucleotide binding domain FIV03_18595 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_18595 PF04324 BFD-like [2Fe-2S] binding domain FIV03_18595 PF00384 Molybdopterin oxidoreductase FIV03_18600 PF10414 Sirohaem synthase dimerisation region FIV03_18600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_18600 PF14824 Sirohaem biosynthesis protein central FIV03_18605 PF00392 Bacterial regulatory proteins, gntR family FIV03_18605 PF07729 FCD domain FIV03_18615 PF13458 Periplasmic binding protein FIV03_18625 PF00005 ABC transporter FIV03_18630 PF01979 Amidohydrolase family FIV03_18640 PF00005 ABC transporter FIV03_18640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_18645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_18645 PF00005 ABC transporter FIV03_18650 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_18655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_18660 PF01546 Peptidase family M20/M25/M40 FIV03_18660 PF07687 Peptidase dimerisation domain FIV03_18665 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FIV03_18665 PF06481 COX Aromatic Rich Motif FIV03_18670 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV03_18675 PF00510 Cytochrome c oxidase subunit III FIV03_18680 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FIV03_18690 PF01134 Glucose inhibited division protein A FIV03_18710 PF00588 SpoU rRNA Methylase family FIV03_18710 PF08032 RNA 2'-O ribose methyltransferase substrate binding FIV03_18735 PF03143 Elongation factor Tu C-terminal domain FIV03_18735 PF00009 Elongation factor Tu GTP binding domain FIV03_18735 PF03144 Elongation factor Tu domain 2 FIV03_18745 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FIV03_18750 PF00467 KOW motif FIV03_18750 PF02357 Transcription termination factor nusG FIV03_18755 PF00298 Ribosomal protein L11, RNA binding domain FIV03_18755 PF03946 Ribosomal protein L11, N-terminal domain FIV03_18760 PF00687 Ribosomal protein L1p/L10e family FIV03_18765 PF00466 Ribosomal protein L10 FIV03_18770 PF00542 Ribosomal protein L7/L12 C-terminal domain FIV03_18770 PF16320 Ribosomal protein L7/L12 dimerisation domain FIV03_18775 PF10385 RNA polymerase beta subunit external 1 domain FIV03_18775 PF04563 RNA polymerase beta subunit FIV03_18775 PF04561 RNA polymerase Rpb2, domain 2 FIV03_18775 PF04565 RNA polymerase Rpb2, domain 3 FIV03_18775 PF00562 RNA polymerase Rpb2, domain 6 FIV03_18775 PF04560 RNA polymerase Rpb2, domain 7 FIV03_18780 PF04998 RNA polymerase Rpb1, domain 5 FIV03_18780 PF04997 RNA polymerase Rpb1, domain 1 FIV03_18780 PF04983 RNA polymerase Rpb1, domain 3 FIV03_18780 PF05000 RNA polymerase Rpb1, domain 4 FIV03_18780 PF00623 RNA polymerase Rpb1, domain 2 FIV03_18790 PF00164 Ribosomal protein S12/S23 FIV03_18795 PF00177 Ribosomal protein S7p/S5e FIV03_18800 PF03144 Elongation factor Tu domain 2 FIV03_18800 PF14492 Elongation Factor G, domain II FIV03_18800 PF00009 Elongation factor Tu GTP binding domain FIV03_18800 PF03764 Elongation factor G, domain IV FIV03_18800 PF00679 Elongation factor G C-terminus FIV03_18805 PF00009 Elongation factor Tu GTP binding domain FIV03_18805 PF03144 Elongation factor Tu domain 2 FIV03_18805 PF03143 Elongation factor Tu C-terminal domain FIV03_18810 PF00338 Ribosomal protein S10p/S20e FIV03_18815 PF00297 Ribosomal protein L3 FIV03_18820 PF00573 Ribosomal protein L4/L1 family FIV03_18825 PF00276 Ribosomal protein L23 FIV03_18830 PF03947 Ribosomal Proteins L2, C-terminal domain FIV03_18830 PF00181 Ribosomal Proteins L2, RNA binding domain FIV03_18835 PF00203 Ribosomal protein S19 FIV03_18840 PF00237 Ribosomal protein L22p/L17e FIV03_18845 PF00189 Ribosomal protein S3, C-terminal domain FIV03_18845 PF07650 KH domain FIV03_18850 PF00252 Ribosomal protein L16p/L10e FIV03_18855 PF00831 Ribosomal L29 protein FIV03_18860 PF00366 Ribosomal protein S17 FIV03_18865 PF00238 Ribosomal protein L14p/L23e FIV03_18870 PF00467 KOW motif FIV03_18870 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FIV03_18875 PF00673 ribosomal L5P family C-terminus FIV03_18875 PF00281 Ribosomal protein L5 FIV03_18880 PF00253 Ribosomal protein S14p/S29e FIV03_18885 PF00410 Ribosomal protein S8 FIV03_18890 PF00347 Ribosomal protein L6 FIV03_18895 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FIV03_18900 PF00333 Ribosomal protein S5, N-terminal domain FIV03_18900 PF03719 Ribosomal protein S5, C-terminal domain FIV03_18905 PF00327 Ribosomal protein L30p/L7e FIV03_18910 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FIV03_18915 PF00344 SecY translocase FIV03_18925 PF00416 Ribosomal protein S13/S18 FIV03_18930 PF00411 Ribosomal protein S11 FIV03_18935 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FIV03_18935 PF01000 RNA polymerase Rpb3/RpoA insert domain FIV03_18935 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FIV03_18940 PF01196 Ribosomal protein L17 FIV03_18945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_18945 PF00672 HAMP domain FIV03_18950 PF17820 PDZ domain FIV03_18950 PF13180 PDZ domain FIV03_18955 PF12002 MgsA AAA+ ATPase C terminal FIV03_18955 PF16193 AAA C-terminal domain FIV03_18955 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_18960 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_18965 PF11856 Protein of unknown function (DUF3376) FIV03_18965 PF01734 Patatin-like phospholipase FIV03_18985 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FIV03_18990 PF01479 S4 domain FIV03_18990 PF00849 RNA pseudouridylate synthase FIV03_19010 PF13419 Haloacid dehalogenase-like hydrolase FIV03_19020 PF00571 CBS domain FIV03_19020 PF01769 Divalent cation transporter FIV03_19020 PF03448 MgtE intracellular N domain FIV03_19030 PF08379 Bacterial transglutaminase-like N-terminal region FIV03_19030 PF01841 Transglutaminase-like superfamily FIV03_19040 PF14403 Circularly permuted ATP-grasp type 2 FIV03_19050 PF01039 Carboxyl transferase domain FIV03_19070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV03_19070 PF00364 Biotin-requiring enzyme FIV03_19070 PF00289 Biotin carboxylase, N-terminal domain FIV03_19070 PF02785 Biotin carboxylase C-terminal domain FIV03_19075 PF13419 Haloacid dehalogenase-like hydrolase FIV03_19080 PF00990 Diguanylate cyclase, GGDEF domain FIV03_19080 PF17151 Periplasmic sensor domain FIV03_19085 PF00892 EamA-like transporter family FIV03_19090 PF00708 Acylphosphatase FIV03_19105 PF04321 RmlD substrate binding domain FIV03_19110 PF02743 Cache domain FIV03_19110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_19110 PF00672 HAMP domain FIV03_19115 PF03099 Biotin/lipoate A/B protein ligase family FIV03_19120 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV03_19145 PF00571 CBS domain FIV03_19145 PF01769 Divalent cation transporter FIV03_19145 PF03448 MgtE intracellular N domain FIV03_19165 PF01047 MarR family FIV03_19170 PF02566 OsmC-like protein FIV03_19190 PF00376 MerR family regulatory protein FIV03_19190 PF09278 MerR, DNA binding FIV03_19205 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_19205 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_19205 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_19220 PF00440 Bacterial regulatory proteins, tetR family FIV03_19240 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_19245 PF00574 Clp protease FIV03_19255 PF00990 Diguanylate cyclase, GGDEF domain FIV03_19255 PF00072 Response regulator receiver domain FIV03_19315 PF01556 DnaJ C terminal domain FIV03_19315 PF00226 DnaJ domain FIV03_19315 PF16713 Enriched in aromatic and glycine Residues box FIV03_19320 PF07943 Penicillin-binding protein 5, C-terminal domain FIV03_19320 PF00768 D-alanyl-D-alanine carboxypeptidase FIV03_19330 PF02617 ATP-dependent Clp protease adaptor protein ClpS FIV03_19335 PF02861 Clp amino terminal domain, pathogenicity island component FIV03_19335 PF17871 AAA lid domain FIV03_19335 PF07724 AAA domain (Cdc48 subfamily) FIV03_19335 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_19335 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_19360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_19365 PF01230 HIT domain FIV03_19380 PF00501 AMP-binding enzyme FIV03_19380 PF01553 Acyltransferase FIV03_19405 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FIV03_19410 PF00440 Bacterial regulatory proteins, tetR family FIV03_19415 PF13533 Biotin-lipoyl like FIV03_19420 PF07690 Major Facilitator Superfamily FIV03_19435 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_19440 PF00264 Common central domain of tyrosinase FIV03_19465 PF07687 Peptidase dimerisation domain FIV03_19465 PF01546 Peptidase family M20/M25/M40 FIV03_19480 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FIV03_19480 PF02867 Ribonucleotide reductase, barrel domain FIV03_19500 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FIV03_19505 PF00289 Biotin carboxylase, N-terminal domain FIV03_19505 PF02785 Biotin carboxylase C-terminal domain FIV03_19505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FIV03_19510 PF00364 Biotin-requiring enzyme FIV03_19530 PF12111 Polyribonucleotide phosphorylase C terminal FIV03_19530 PF10150 Ribonuclease E/G family FIV03_19530 PF00575 S1 RNA binding domain FIV03_19535 PF11741 AMIN domain FIV03_19535 PF01520 N-acetylmuramoyl-L-alanine amidase FIV03_19540 PF17092 Penicillin-binding protein OB-like domain FIV03_19540 PF00905 Penicillin binding protein transpeptidase domain FIV03_19540 PF00912 Transglycosylase FIV03_19545 PF03462 PCRF domain FIV03_19545 PF00472 RF-1 domain FIV03_19550 PF01551 Peptidase family M23 FIV03_19550 PF08525 Opacity-associated protein A N-terminal motif FIV03_19550 PF01476 LysM domain FIV03_19555 PF04305 Protein of unknown function (DUF455) FIV03_19560 PF00578 AhpC/TSA family FIV03_19570 PF00579 tRNA synthetases class I (W and Y) FIV03_19570 PF01479 S4 domain FIV03_19585 PF03576 Peptidase family S58 FIV03_19590 PF03951 Glutamine synthetase, beta-Grasp domain FIV03_19590 PF00120 Glutamine synthetase, catalytic domain FIV03_19595 PF00543 Nitrogen regulatory protein P-II FIV03_19605 PF07536 HWE histidine kinase FIV03_19605 PF13426 PAS domain FIV03_19605 PF08447 PAS fold FIV03_19615 PF01256 Carbohydrate kinase FIV03_19615 PF03853 YjeF-related protein N-terminus FIV03_19625 PF05697 Bacterial trigger factor protein (TF) FIV03_19625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV03_19625 PF05698 Bacterial trigger factor protein (TF) C-terminus FIV03_19630 PF00574 Clp protease FIV03_19635 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_19635 PF06689 ClpX C4-type zinc finger FIV03_19635 PF07724 AAA domain (Cdc48 subfamily) FIV03_19640 PF02190 ATP-dependent protease La (LON) substrate-binding domain FIV03_19640 PF05362 Lon protease (S16) C-terminal proteolytic domain FIV03_19640 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_19645 PF00216 Bacterial DNA-binding protein FIV03_19655 PF01593 Flavin containing amine oxidoreductase FIV03_19665 PF02690 Na+/Pi-cotransporter FIV03_19680 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FIV03_19685 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FIV03_19690 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FIV03_19700 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FIV03_19710 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FIV03_19710 PF10531 SLBB domain FIV03_19710 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV03_19715 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FIV03_19715 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIV03_19715 PF00384 Molybdopterin oxidoreductase FIV03_19720 PF00146 NADH dehydrogenase FIV03_19730 PF12838 4Fe-4S dicluster domain FIV03_19735 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FIV03_19740 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FIV03_19745 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FIV03_19745 PF00361 Proton-conducting membrane transporter FIV03_19750 PF00361 Proton-conducting membrane transporter FIV03_19755 PF00361 Proton-conducting membrane transporter FIV03_19760 PF02237 Biotin protein ligase C terminal domain FIV03_19760 PF03099 Biotin/lipoate A/B protein ligase family FIV03_19765 PF17770 Ribonuclease J C-terminal domain FIV03_19765 PF12706 Beta-lactamase superfamily domain FIV03_19765 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FIV03_19780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV03_19780 PF03129 Anticodon binding domain FIV03_19785 PF02687 FtsX-like permease family FIV03_19785 PF12704 MacB-like periplasmic core domain FIV03_19790 PF00005 ABC transporter FIV03_19800 PF14579 Helix-hairpin-helix motif FIV03_19800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV03_19800 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV03_19800 PF02811 PHP domain FIV03_19805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_19805 PF03466 LysR substrate binding domain FIV03_19810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_19825 PF00005 ABC transporter FIV03_19825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_19830 PF01425 Amidase FIV03_19835 PF00392 Bacterial regulatory proteins, gntR family FIV03_19835 PF00155 Aminotransferase class I and II FIV03_19840 PF07883 Cupin domain FIV03_19850 PF00318 Ribosomal protein S2 FIV03_19855 PF00889 Elongation factor TS FIV03_19860 PF00696 Amino acid kinase family FIV03_19865 PF01765 Ribosome recycling factor FIV03_19870 PF01255 Putative undecaprenyl diphosphate synthase FIV03_19880 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FIV03_19880 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FIV03_19880 PF13288 DXP reductoisomerase C-terminal domain FIV03_19885 PF17820 PDZ domain FIV03_19885 PF02163 Peptidase family M50 FIV03_19890 PF07244 Surface antigen variable number repeat FIV03_19890 PF01103 Surface antigen FIV03_19895 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FIV03_19895 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_19900 PF07977 FabA-like domain FIV03_19905 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_19905 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FIV03_19915 PF02684 Lipid-A-disaccharide synthetase FIV03_19920 PF00155 Aminotransferase class I and II FIV03_19940 PF00672 HAMP domain FIV03_19940 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_19945 PF00285 Citrate synthase, C-terminal domain FIV03_19950 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV03_19955 PF03772 Competence protein FIV03_19955 PF00753 Metallo-beta-lactamase superfamily FIV03_19960 PF01726 LexA DNA binding domain FIV03_19960 PF00717 Peptidase S24-like FIV03_19970 PF00501 AMP-binding enzyme FIV03_19970 PF13193 AMP-binding enzyme C-terminal domain FIV03_19980 PF10415 Fumarase C C-terminus FIV03_19980 PF00206 Lyase FIV03_19990 PF00392 Bacterial regulatory proteins, gntR family FIV03_19990 PF07729 FCD domain FIV03_20010 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_20010 PF00460 Flagella basal body rod protein FIV03_20015 PF02049 Flagellar hook-basal body complex protein FliE FIV03_20020 PF00460 Flagella basal body rod protein FIV03_20020 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_20025 PF13144 Chaperone for flagella basal body P-ring formation FIV03_20030 PF02119 Flagellar P-ring protein FIV03_20040 PF02107 Flagellar L-ring protein FIV03_20050 PF00813 FliP family FIV03_20055 PF00700 Bacterial flagellin C-terminal helical region FIV03_20055 PF00669 Bacterial flagellin N-terminal helical region FIV03_20060 PF08345 Flagellar M-ring protein C-terminal FIV03_20060 PF01514 Secretory protein of YscJ/FliF family FIV03_20070 PF13677 Membrane MotB of proton-channel complex MotA/MotB FIV03_20070 PF00691 OmpA family FIV03_20090 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_20090 PF07559 Flagellar basal body protein FlaE FIV03_20090 PF00460 Flagella basal body rod protein FIV03_20105 PF07309 Flagellar protein FlaF FIV03_20110 PF07378 Flagellar protein FlbT FIV03_20115 PF03963 Flagellar hook capping protein - N-terminal region FIV03_20120 PF01313 Bacterial export proteins, family 3 FIV03_20125 PF00771 FHIPEP family FIV03_20130 PF01311 Bacterial export proteins, family 1 FIV03_20170 PF01312 FlhB HrpN YscU SpaS Family FIV03_20175 PF14842 FliG N-terminal domain FIV03_20175 PF14841 FliG middle domain FIV03_20175 PF01706 FliG C-terminal domain FIV03_20180 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FIV03_20195 PF01618 MotA/TolQ/ExbB proton channel family FIV03_20205 PF00460 Flagella basal body rod protein FIV03_20205 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FIV03_20215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FIV03_20215 PF18269 T3SS EscN ATPase C-terminal domain FIV03_20220 PF00486 Transcriptional regulatory protein, C terminal FIV03_20225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_20225 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_20225 PF00512 His Kinase A (phospho-acceptor) domain FIV03_20230 PF00563 EAL domain FIV03_20230 PF03707 Bacterial signalling protein N terminal repeat FIV03_20230 PF00990 Diguanylate cyclase, GGDEF domain FIV03_20240 PF01799 [2Fe-2S] binding domain FIV03_20240 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_20245 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_20245 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_20250 PF03450 CO dehydrogenase flavoprotein C-terminal domain FIV03_20250 PF00941 FAD binding domain in molybdopterin dehydrogenase FIV03_20255 PF03453 MoeA N-terminal region (domain I and II) FIV03_20255 PF03454 MoeA C-terminal region (domain IV) FIV03_20255 PF00994 Probable molybdopterin binding domain FIV03_20260 PF01967 MoaC family FIV03_20265 PF00218 Indole-3-glycerol phosphate synthase FIV03_20270 PF00591 Glycosyl transferase family, a/b domain FIV03_20270 PF02885 Glycosyl transferase family, helical bundle domain FIV03_20275 PF13145 PPIC-type PPIASE domain FIV03_20280 PF00121 Triosephosphate isomerase FIV03_20290 PF06418 CTP synthase N-terminus FIV03_20290 PF00117 Glutamine amidotransferase class-I FIV03_20300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_20305 PF00873 AcrB/AcrD/AcrF family FIV03_20325 PF02683 Cytochrome C biogenesis protein transmembrane region FIV03_20335 PF12804 MobA-like NTP transferase domain FIV03_20335 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_20340 PF01380 SIS domain FIV03_20345 PF00583 Acetyltransferase (GNAT) family FIV03_20350 PF04304 Protein of unknown function (DUF454) FIV03_20360 PF00271 Helicase conserved C-terminal domain FIV03_20360 PF00270 DEAD/DEAH box helicase FIV03_20360 PF17191 RecG wedge domain FIV03_20365 PF03937 Flavinator of succinate dehydrogenase FIV03_20370 PF17757 UvrB interaction domain FIV03_20370 PF00270 DEAD/DEAH box helicase FIV03_20370 PF02559 CarD-like/TRCF domain FIV03_20370 PF00271 Helicase conserved C-terminal domain FIV03_20370 PF03461 TRCF domain FIV03_20385 PF00676 Dehydrogenase E1 component FIV03_20390 PF02779 Transketolase, pyrimidine binding domain FIV03_20390 PF02780 Transketolase, C-terminal domain FIV03_20390 PF00364 Biotin-requiring enzyme FIV03_20395 PF02817 e3 binding domain FIV03_20395 PF00364 Biotin-requiring enzyme FIV03_20395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV03_20400 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_20400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_20420 PF04055 Radical SAM superfamily FIV03_20425 PF03364 Polyketide cyclase / dehydrase and lipid transport FIV03_20445 PF00994 Probable molybdopterin binding domain FIV03_20445 PF02464 Competence-damaged protein FIV03_20445 PF18146 Damage-inducible protein CinA KH domain FIV03_20450 PF02542 YgbB family FIV03_20450 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FIV03_20455 PF01207 Dihydrouridine synthase (Dus) FIV03_20460 PF00512 His Kinase A (phospho-acceptor) domain FIV03_20460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_20460 PF00989 PAS fold FIV03_20465 PF00158 Sigma-54 interaction domain FIV03_20465 PF02954 Bacterial regulatory protein, Fis family FIV03_20465 PF00072 Response regulator receiver domain FIV03_20470 PF00672 HAMP domain FIV03_20470 PF00989 PAS fold FIV03_20470 PF00512 His Kinase A (phospho-acceptor) domain FIV03_20470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_20475 PF00072 Response regulator receiver domain FIV03_20475 PF00158 Sigma-54 interaction domain FIV03_20475 PF02954 Bacterial regulatory protein, Fis family FIV03_20480 PF02080 TrkA-C domain FIV03_20480 PF02254 TrkA-N domain FIV03_20485 PF01063 Amino-transferase class IV FIV03_20490 PF17209 Hfq protein FIV03_20495 PF01926 50S ribosome-binding GTPase FIV03_20495 PF13167 GTP-binding GTPase N-terminal FIV03_20495 PF16360 GTP-binding GTPase Middle Region FIV03_20500 PF03819 MazG nucleotide pyrophosphohydrolase domain FIV03_20505 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_20510 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_20515 PF00005 ABC transporter FIV03_20520 PF01979 Amidohydrolase family FIV03_20530 PF01546 Peptidase family M20/M25/M40 FIV03_20530 PF07687 Peptidase dimerisation domain FIV03_20535 PF00202 Aminotransferase class-III FIV03_20540 PF00440 Bacterial regulatory proteins, tetR family FIV03_20540 PF08362 YcdC-like protein, C-terminal region FIV03_20545 PF00472 RF-1 domain FIV03_20550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_20550 PF13426 PAS domain FIV03_20550 PF08447 PAS fold FIV03_20555 PF07478 D-ala D-ala ligase C-terminus FIV03_20555 PF01820 D-ala D-ala ligase N-terminus FIV03_20570 PF02631 RecX family FIV03_20580 PF01026 TatD related DNase FIV03_20585 PF12170 DNA polymerase III tau subunit V interacting with alpha FIV03_20585 PF12169 DNA polymerase III subunits gamma and tau domain III FIV03_20590 PF02223 Thymidylate kinase FIV03_20595 PF07943 Penicillin-binding protein 5, C-terminal domain FIV03_20595 PF00768 D-alanyl-D-alanine carboxypeptidase FIV03_20600 PF05036 Sporulation related domain FIV03_20600 PF03330 Lytic transglycolase FIV03_20610 PF04397 LytTr DNA-binding domain FIV03_20610 PF00072 Response regulator receiver domain FIV03_20615 PF00941 FAD binding domain in molybdopterin dehydrogenase FIV03_20615 PF03450 CO dehydrogenase flavoprotein C-terminal domain FIV03_20620 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_20620 PF01799 [2Fe-2S] binding domain FIV03_20625 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_20625 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_20630 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_20630 PF17871 AAA lid domain FIV03_20630 PF07724 AAA domain (Cdc48 subfamily) FIV03_20630 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_20630 PF02861 Clp amino terminal domain, pathogenicity island component FIV03_20640 PF02625 XdhC and CoxI family FIV03_20640 PF13478 XdhC Rossmann domain FIV03_20660 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_20665 PF00005 ABC transporter FIV03_20670 PF00491 Arginase family FIV03_20690 PF00563 EAL domain FIV03_20690 PF00990 Diguanylate cyclase, GGDEF domain FIV03_20690 PF08447 PAS fold FIV03_20690 PF08448 PAS fold FIV03_20700 PF01734 Patatin-like phospholipase FIV03_20705 PF02608 ABC transporter substrate-binding protein PnrA-like FIV03_20730 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_20730 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_20735 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_20735 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_20735 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_20735 PF01799 [2Fe-2S] binding domain FIV03_20745 PF03466 LysR substrate binding domain FIV03_20745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_20750 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_20750 PF00107 Zinc-binding dehydrogenase FIV03_20765 PF01494 FAD binding domain FIV03_20775 PF03547 Membrane transport protein FIV03_20785 PF03328 HpcH/HpaI aldolase/citrate lyase family FIV03_20800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_20820 PF00113 Enolase, C-terminal TIM barrel domain FIV03_20820 PF03952 Enolase, N-terminal domain FIV03_20825 PF00793 DAHP synthetase I family FIV03_20830 PF00483 Nucleotidyl transferase FIV03_20835 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FIV03_20835 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FIV03_20835 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FIV03_20845 PF01702 Queuine tRNA-ribosyltransferase FIV03_20850 PF02547 Queuosine biosynthesis protein FIV03_20855 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV03_20860 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FIV03_20865 PF01467 Cytidylyltransferase-like FIV03_20875 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV03_20875 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV03_20880 PF01914 MarC family integral membrane protein FIV03_20890 PF01638 HxlR-like helix-turn-helix FIV03_20895 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_20895 PF00107 Zinc-binding dehydrogenase FIV03_20915 PF02540 NAD synthase FIV03_20915 PF00958 GMP synthase C terminal domain FIV03_20915 PF00117 Glutamine amidotransferase class-I FIV03_20925 PF01189 16S rRNA methyltransferase RsmB/F FIV03_20925 PF01029 NusB family FIV03_20930 PF00478 IMP dehydrogenase / GMP reductase domain FIV03_20930 PF00571 CBS domain FIV03_20935 PF01728 FtsJ-like methyltransferase FIV03_20940 PF02541 Ppx/GppA phosphatase family FIV03_20955 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_20955 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_20955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_20960 PF00294 pfkB family carbohydrate kinase FIV03_20965 PF00551 Formyl transferase FIV03_20970 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_20970 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_20975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_20980 PF02548 Ketopantoate hydroxymethyltransferase FIV03_20985 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_20985 PF14759 Reductase C-terminal FIV03_20990 PF01261 Xylose isomerase-like TIM barrel FIV03_20995 PF00355 Rieske [2Fe-2S] domain FIV03_21005 PF01261 Xylose isomerase-like TIM barrel FIV03_21010 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_21010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_21015 PF00005 ABC transporter FIV03_21020 PF02653 Branched-chain amino acid transport system / permease component FIV03_21030 PF02653 Branched-chain amino acid transport system / permease component FIV03_21035 PF02653 Branched-chain amino acid transport system / permease component FIV03_21055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV03_21055 PF00356 Bacterial regulatory proteins, lacI family FIV03_21070 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FIV03_21090 PF00392 Bacterial regulatory proteins, gntR family FIV03_21090 PF07729 FCD domain FIV03_21095 PF07687 Peptidase dimerisation domain FIV03_21095 PF01546 Peptidase family M20/M25/M40 FIV03_21100 PF00557 Metallopeptidase family M24 FIV03_21100 PF01321 Creatinase/Prolidase N-terminal domain FIV03_21105 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_21110 PF02423 Ornithine cyclodeaminase/mu-crystallin family FIV03_21115 PF01037 Lrp/AsnC ligand binding domain FIV03_21120 PF00171 Aldehyde dehydrogenase family FIV03_21125 PF00202 Aminotransferase class-III FIV03_21130 PF00664 ABC transporter transmembrane region FIV03_21130 PF00005 ABC transporter FIV03_21130 PF03412 Peptidase C39 family FIV03_21135 PF00664 ABC transporter transmembrane region FIV03_21135 PF00005 ABC transporter FIV03_21150 PF00378 Enoyl-CoA hydratase/isomerase FIV03_21155 PF03061 Thioesterase superfamily FIV03_21165 PF00171 Aldehyde dehydrogenase family FIV03_21165 PF01575 MaoC like domain FIV03_21170 PF00175 Oxidoreductase NAD-binding domain FIV03_21170 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_21170 PF00970 Oxidoreductase FAD-binding domain FIV03_21175 PF01883 Iron-sulfur cluster assembly protein FIV03_21180 PF05138 Phenylacetic acid catabolic protein FIV03_21185 PF06243 Phenylacetic acid degradation B FIV03_21195 PF05138 Phenylacetic acid catabolic protein FIV03_21205 PF01297 Zinc-uptake complex component A periplasmic FIV03_21210 PF03734 L,D-transpeptidase catalytic domain FIV03_21210 PF01471 Putative peptidoglycan binding domain FIV03_21220 PF00436 Single-strand binding protein family FIV03_21225 PF17760 UvrA interaction domain FIV03_21225 PF17755 UvrA DNA-binding domain FIV03_21250 PF01134 Glucose inhibited division protein A FIV03_21265 PF02355 Protein export membrane protein FIV03_21265 PF07549 SecD/SecF GG Motif FIV03_21270 PF02355 Protein export membrane protein FIV03_21275 PF02699 Preprotein translocase subunit FIV03_21285 PF01476 LysM domain FIV03_21285 PF01551 Peptidase family M23 FIV03_21295 PF01975 Survival protein SurE FIV03_21300 PF02403 Seryl-tRNA synthetase N-terminal domain FIV03_21300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FIV03_21305 PF00902 Sec-independent protein translocase protein (TatC) FIV03_21310 PF02416 mttA/Hcf106 family FIV03_21315 PF02416 mttA/Hcf106 family FIV03_21320 PF08402 TOBE domain FIV03_21320 PF00005 ABC transporter FIV03_21325 PF04079 Segregation and condensation complex subunit ScpB FIV03_21330 PF02616 Segregation and condensation protein ScpA FIV03_21335 PF00933 Glycosyl hydrolase family 3 N terminal domain FIV03_21350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_21350 PF03466 LysR substrate binding domain FIV03_21360 PF05746 DALR anticodon binding domain FIV03_21360 PF00750 tRNA synthetases class I (R) FIV03_21360 PF03485 Arginyl tRNA synthetase N terminal domain FIV03_21365 PF01966 HD domain FIV03_21365 PF13286 Phosphohydrolase-associated domain FIV03_21370 PF01521 Iron-sulphur cluster biosynthesis FIV03_21385 PF00204 DNA gyrase B FIV03_21385 PF00986 DNA gyrase B subunit, carboxyl terminus FIV03_21385 PF01751 Toprim domain FIV03_21385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_21395 PF00270 DEAD/DEAH box helicase FIV03_21395 PF00271 Helicase conserved C-terminal domain FIV03_21400 PF00072 Response regulator receiver domain FIV03_21400 PF00990 Diguanylate cyclase, GGDEF domain FIV03_21405 PF03070 TENA/THI-4/PQQC family FIV03_21410 PF01521 Iron-sulphur cluster biosynthesis FIV03_21415 PF01883 Iron-sulfur cluster assembly protein FIV03_21420 PF00266 Aminotransferase class-V FIV03_21425 PF01458 Uncharacterized protein family (UPF0051) FIV03_21430 PF00005 ABC transporter FIV03_21440 PF01458 Uncharacterized protein family (UPF0051) FIV03_21445 PF00266 Aminotransferase class-V FIV03_21450 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FIV03_21470 PF00133 tRNA synthetases class I (I, L, M and V) FIV03_21470 PF08264 Anticodon-binding domain of tRNA FIV03_21470 PF10458 Valyl tRNA synthetase tRNA binding arm FIV03_21485 PF02321 Outer membrane efflux protein FIV03_21505 PF04107 Glutamate-cysteine ligase family 2(GCS2) FIV03_21515 PF00155 Aminotransferase class I and II FIV03_21520 PF03186 CobD/Cbib protein FIV03_21525 PF07685 CobB/CobQ-like glutamine amidotransferase domain FIV03_21535 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FIV03_21540 PF02514 CobN/Magnesium Chelatase FIV03_21545 PF02492 CobW/HypB/UreG, nucleotide-binding domain FIV03_21545 PF07683 Cobalamin synthesis protein cobW C-terminal domain FIV03_21550 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FIV03_21565 PF01979 Amidohydrolase family FIV03_21570 PF01380 SIS domain FIV03_21575 PF07702 UTRA domain FIV03_21575 PF00392 Bacterial regulatory proteins, gntR family FIV03_21580 PF13580 SIS domain FIV03_21585 PF00480 ROK family FIV03_21590 PF03932 CutC family FIV03_21600 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_21605 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_21610 PF01547 Bacterial extracellular solute-binding protein FIV03_21615 PF17912 MalK OB fold domain FIV03_21615 PF00005 ABC transporter FIV03_21620 PF14031 Putative serine dehydratase domain FIV03_21620 PF01168 Alanine racemase, N-terminal domain FIV03_21625 PF07364 Metallopeptidase family M81 FIV03_21625 PF07171 MlrC C-terminus FIV03_21640 PF01380 SIS domain FIV03_21640 PF01418 Helix-turn-helix domain, rpiR family FIV03_21650 PF02838 Glycosyl hydrolase family 20, domain 2 FIV03_21650 PF00728 Glycosyl hydrolase family 20, catalytic domain FIV03_21680 PF00106 short chain dehydrogenase FIV03_21690 PF00571 CBS domain FIV03_21690 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_21695 PF13091 PLD-like domain FIV03_21700 PF01810 LysE type translocator FIV03_21715 PF01411 tRNA synthetases class II (A) FIV03_21715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FIV03_21715 PF02272 DHHA1 domain FIV03_21720 PF04828 Glutathione-dependent formaldehyde-activating enzyme FIV03_21725 PF00581 Rhodanese-like domain FIV03_21740 PF00440 Bacterial regulatory proteins, tetR family FIV03_21750 PF00005 ABC transporter FIV03_21755 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_21760 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_21765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_21770 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_21780 PF00535 Glycosyl transferase family 2 FIV03_21785 PF01569 PAP2 superfamily FIV03_21790 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FIV03_21795 PF00149 Calcineurin-like phosphoesterase FIV03_21870 PF00313 'Cold-shock' DNA-binding domain FIV03_21875 PF02146 Sir2 family FIV03_21880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_21915 PF01618 MotA/TolQ/ExbB proton channel family FIV03_21930 PF00069 Protein kinase domain FIV03_21950 PF00691 OmpA family FIV03_21950 PF13488 Glycine zipper FIV03_21970 PF04717 Type VI secretion system, phage-baseplate injector FIV03_21970 PF16671 Actin cross-linking domain FIV03_21975 PF05736 OprF membrane domain FIV03_21975 PF00691 OmpA family FIV03_21995 PF05638 Type VI secretion system effector, Hcp FIV03_22015 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_22015 PF07724 AAA domain (Cdc48 subfamily) FIV03_22015 PF17871 AAA lid domain FIV03_22015 PF10431 C-terminal, D2-small domain, of ClpB protein FIV03_22025 PF10145 Phage-related minor tail protein FIV03_22025 PF01551 Peptidase family M23 FIV03_22025 PF01464 Transglycosylase SLT domain FIV03_22030 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_22030 PF00672 HAMP domain FIV03_22060 PF02423 Ornithine cyclodeaminase/mu-crystallin family FIV03_22065 PF01699 Sodium/calcium exchanger protein FIV03_22070 PF00005 ABC transporter FIV03_22075 PF00005 ABC transporter FIV03_22085 PF02653 Branched-chain amino acid transport system / permease component FIV03_22100 PF01432 Peptidase family M3 FIV03_22110 PF00067 Cytochrome P450 FIV03_22120 PF00756 Putative esterase FIV03_22125 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_22125 PF00107 Zinc-binding dehydrogenase FIV03_22130 PF01266 FAD dependent oxidoreductase FIV03_22135 PF04267 Sarcosine oxidase, delta subunit family FIV03_22140 PF01571 Aminomethyltransferase folate-binding domain FIV03_22140 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV03_22140 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_22140 PF17806 Sarcosine oxidase A3 domain FIV03_22145 PF04268 Sarcosine oxidase, gamma subunit family FIV03_22160 PF01384 Phosphate transporter family FIV03_22170 PF01384 Phosphate transporter family FIV03_22190 PF01368 DHH family FIV03_22190 PF02272 DHHA1 domain FIV03_22190 PF17768 RecJ OB domain FIV03_22195 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FIV03_22200 PF01842 ACT domain FIV03_22200 PF00742 Homoserine dehydrogenase FIV03_22200 PF03447 Homoserine dehydrogenase, NAD binding domain FIV03_22205 PF00155 Aminotransferase class I and II FIV03_22210 PF00990 Diguanylate cyclase, GGDEF domain FIV03_22220 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FIV03_22225 PF00563 EAL domain FIV03_22225 PF00990 Diguanylate cyclase, GGDEF domain FIV03_22225 PF03707 Bacterial signalling protein N terminal repeat FIV03_22240 PF00491 Arginase family FIV03_22245 PF01545 Cation efflux family FIV03_22250 PF01979 Amidohydrolase family FIV03_22255 PF00083 Sugar (and other) transporter FIV03_22260 PF00376 MerR family regulatory protein FIV03_22260 PF09278 MerR, DNA binding FIV03_22265 PF01554 MatE FIV03_22270 PF00380 Ribosomal protein S9/S16 FIV03_22275 PF00572 Ribosomal protein L13 FIV03_22295 PF00175 Oxidoreductase NAD-binding domain FIV03_22295 PF00970 Oxidoreductase FAD-binding domain FIV03_22295 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_22300 PF02574 Homocysteine S-methyltransferase FIV03_22300 PF02219 Methylenetetrahydrofolate reductase FIV03_22305 PF06253 Trimethylamine methyltransferase (MTTB) FIV03_22310 PF00550 Phosphopantetheine attachment site FIV03_22310 PF08659 KR domain FIV03_22310 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_22310 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_22310 PF16197 Ketoacyl-synthetase C-terminal extension FIV03_22310 PF14765 Polyketide synthase dehydratase FIV03_22310 PF00698 Acyl transferase domain FIV03_22310 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_22315 PF00155 Aminotransferase class I and II FIV03_22325 PF05159 Capsule polysaccharide biosynthesis protein FIV03_22330 PF05159 Capsule polysaccharide biosynthesis protein FIV03_22335 PF05159 Capsule polysaccharide biosynthesis protein FIV03_22340 PF02563 Polysaccharide biosynthesis/export protein FIV03_22350 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FIV03_22350 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FIV03_22355 PF07244 Surface antigen variable number repeat FIV03_22355 PF01103 Surface antigen FIV03_22355 PF17243 POTRA domain TamA domain 1 FIV03_22370 PF00171 Aldehyde dehydrogenase family FIV03_22375 PF00563 EAL domain FIV03_22375 PF00990 Diguanylate cyclase, GGDEF domain FIV03_22375 PF08447 PAS fold FIV03_22375 PF08448 PAS fold FIV03_22395 PF04264 YceI-like domain FIV03_22400 PF01292 Prokaryotic cytochrome b561 FIV03_22410 PF05683 Fumarase C-terminus FIV03_22410 PF05681 Fumarate hydratase (Fumerase) FIV03_22415 PF17969 L,D-transpeptidase C-terminal domain FIV03_22415 PF03734 L,D-transpeptidase catalytic domain FIV03_22420 PF00440 Bacterial regulatory proteins, tetR family FIV03_22435 PF00772 DnaB-like helicase N terminal domain FIV03_22435 PF03796 DnaB-like helicase C terminal domain FIV03_22435 PF14528 LAGLIDADG-like domain FIV03_22445 PF03441 FAD binding domain of DNA photolyase FIV03_22445 PF00875 DNA photolyase FIV03_22450 PF04055 Radical SAM superfamily FIV03_22450 PF06463 Molybdenum Cofactor Synthesis C FIV03_22455 PF07690 Major Facilitator Superfamily FIV03_22460 PF10609 NUBPL iron-transfer P-loop NTPase FIV03_22480 PF03594 Benzoate membrane transport protein FIV03_22485 PF02634 FdhD/NarQ family FIV03_22490 PF12804 MobA-like NTP transferase domain FIV03_22495 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FIV03_22500 PF03453 MoeA N-terminal region (domain I and II) FIV03_22500 PF03454 MoeA C-terminal region (domain IV) FIV03_22500 PF00994 Probable molybdopterin binding domain FIV03_22505 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FIV03_22505 PF10996 Beta-Casp domain FIV03_22505 PF00753 Metallo-beta-lactamase superfamily FIV03_22510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_22510 PF03466 LysR substrate binding domain FIV03_22515 PF00043 Glutathione S-transferase, C-terminal domain FIV03_22515 PF13417 Glutathione S-transferase, N-terminal domain FIV03_22525 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_22530 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_22535 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_22540 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_22545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_22545 PF03466 LysR substrate binding domain FIV03_22555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV03_22555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV03_22570 PF00970 Oxidoreductase FAD-binding domain FIV03_22570 PF00175 Oxidoreductase NAD-binding domain FIV03_22570 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_22575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIV03_22575 PF00355 Rieske [2Fe-2S] domain FIV03_22585 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV03_22605 PF13404 AsnC-type helix-turn-helix domain FIV03_22605 PF01037 Lrp/AsnC ligand binding domain FIV03_22615 PF03167 Uracil DNA glycosylase superfamily FIV03_22620 PF00989 PAS fold FIV03_22620 PF00512 His Kinase A (phospho-acceptor) domain FIV03_22620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_22625 PF02277 Phosphoribosyltransferase FIV03_22630 PF02654 Cobalamin-5-phosphate synthase FIV03_22645 PF01207 Dihydrouridine synthase (Dus) FIV03_22650 PF01648 4'-phosphopantetheinyl transferase superfamily FIV03_22655 PF00005 ABC transporter FIV03_22655 PF00664 ABC transporter transmembrane region FIV03_22660 PF03621 MbtH-like protein FIV03_22665 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FIV03_22665 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FIV03_22670 PF13193 AMP-binding enzyme C-terminal domain FIV03_22670 PF00501 AMP-binding enzyme FIV03_22670 PF00668 Condensation domain FIV03_22670 PF07993 Male sterility protein FIV03_22670 PF00550 Phosphopantetheine attachment site FIV03_22675 PF00296 Luciferase-like monooxygenase FIV03_22710 PF00892 EamA-like transporter family FIV03_22715 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_22720 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_22730 PF08534 Redoxin FIV03_22735 PF08173 Membrane bound YbgT-like protein FIV03_22740 PF02322 Cytochrome bd terminal oxidase subunit II FIV03_22745 PF01654 Cytochrome bd terminal oxidase subunit I FIV03_22755 PF00664 ABC transporter transmembrane region FIV03_22755 PF00005 ABC transporter FIV03_22765 PF04191 Phospholipid methyltransferase FIV03_22770 PF00171 Aldehyde dehydrogenase family FIV03_22775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_22775 PF03466 LysR substrate binding domain FIV03_22780 PF02581 Thiamine monophosphate synthase FIV03_22785 PF05690 Thiazole biosynthesis protein ThiG FIV03_22795 PF01266 FAD dependent oxidoreductase FIV03_22805 PF05726 Pirin C-terminal cupin domain FIV03_22805 PF02678 Pirin FIV03_22815 PF00596 Class II Aldolase and Adducin N-terminal domain FIV03_22820 PF00480 ROK family FIV03_22830 PF01047 MarR family FIV03_22835 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FIV03_22840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_22840 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_22850 PF00117 Glutamine amidotransferase class-I FIV03_22850 PF00425 chorismate binding enzyme FIV03_22850 PF04715 Anthranilate synthase component I, N terminal region FIV03_22870 PF00990 Diguanylate cyclase, GGDEF domain FIV03_22870 PF13188 PAS domain FIV03_22870 PF03707 Bacterial signalling protein N terminal repeat FIV03_22870 PF00563 EAL domain FIV03_22880 PF00920 Dehydratase family FIV03_22895 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FIV03_22900 PF00440 Bacterial regulatory proteins, tetR family FIV03_22925 PF00884 Sulfatase FIV03_22935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FIV03_22935 PF00205 Thiamine pyrophosphate enzyme, central domain FIV03_22935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FIV03_22950 PF03652 Holliday junction resolvase FIV03_22960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV03_22960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV03_22965 PF01979 Amidohydrolase family FIV03_22975 PF02660 Glycerol-3-phosphate acyltransferase FIV03_22980 PF02481 DNA recombination-mediator protein A FIV03_22980 PF17782 DprA winged helix domain FIV03_22985 PF01396 Topoisomerase DNA binding C4 zinc finger FIV03_22985 PF01751 Toprim domain FIV03_22985 PF01131 DNA topoisomerase FIV03_22985 PF13368 Topoisomerase C-terminal repeat FIV03_22990 PF08461 Ribonuclease R winged-helix domain FIV03_22990 PF17876 Cold shock domain FIV03_22990 PF00575 S1 RNA binding domain FIV03_22990 PF00773 RNB domain FIV03_22990 PF08206 Ribonuclease B OB domain FIV03_23010 PF00471 Ribosomal protein L33 FIV03_23015 PF00072 Response regulator receiver domain FIV03_23030 PF11799 impB/mucB/samB family C-terminal domain FIV03_23030 PF00817 impB/mucB/samB family FIV03_23055 PF00583 Acetyltransferase (GNAT) family FIV03_23055 PF13508 Acetyltransferase (GNAT) domain FIV03_23065 PF03466 LysR substrate binding domain FIV03_23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_23080 PF05899 Protein of unknown function (DUF861) FIV03_23080 PF07883 Cupin domain FIV03_23085 PF00873 AcrB/AcrD/AcrF family FIV03_23100 PF00563 EAL domain FIV03_23100 PF12792 CSS motif domain associated with EAL FIV03_23105 PF00294 pfkB family carbohydrate kinase FIV03_23115 PF00005 ABC transporter FIV03_23115 PF00664 ABC transporter transmembrane region FIV03_23120 PF02938 GAD domain FIV03_23120 PF00152 tRNA synthetases class II (D, K and N) FIV03_23120 PF01336 OB-fold nucleic acid binding domain FIV03_23125 PF10609 NUBPL iron-transfer P-loop NTPase FIV03_23125 PF01883 Iron-sulfur cluster assembly protein FIV03_23130 PF01612 3'-5' exonuclease FIV03_23130 PF00570 HRDC domain FIV03_23140 PF02503 Polyphosphate kinase middle domain FIV03_23140 PF17941 Polyphosphate kinase C-terminal domain 1 FIV03_23140 PF13089 Polyphosphate kinase N-terminal domain FIV03_23140 PF13090 Polyphosphate kinase C-terminal domain 2 FIV03_23150 PF01594 AI-2E family transporter FIV03_23155 PF02769 AIR synthase related protein, C-terminal domain FIV03_23155 PF00586 AIR synthase related protein, N-terminal domain FIV03_23160 PF00551 Formyl transferase FIV03_23175 PF00005 ABC transporter FIV03_23180 PF01032 FecCD transport family FIV03_23190 PF01209 ubiE/COQ5 methyltransferase family FIV03_23200 PF00392 Bacterial regulatory proteins, gntR family FIV03_23200 PF07729 FCD domain FIV03_23205 PF08402 TOBE domain FIV03_23205 PF00005 ABC transporter FIV03_23215 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_23225 PF01177 Asp/Glu/Hydantoin racemase FIV03_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_23230 PF03466 LysR substrate binding domain FIV03_23240 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_23245 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_23245 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_23250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_23260 PF00005 ABC transporter FIV03_23260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_23265 PF05661 Protein of unknown function (DUF808) FIV03_23270 PF00117 Glutamine amidotransferase class-I FIV03_23270 PF02540 NAD synthase FIV03_23270 PF00958 GMP synthase C terminal domain FIV03_23285 PF00392 Bacterial regulatory proteins, gntR family FIV03_23285 PF00155 Aminotransferase class I and II FIV03_23295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_23295 PF00384 Molybdopterin oxidoreductase FIV03_23295 PF01568 Molydopterin dinucleotide binding domain FIV03_23310 PF00334 Nucleoside diphosphate kinase FIV03_23330 PF12848 ABC transporter FIV03_23330 PF00005 ABC transporter FIV03_23350 PF04364 DNA polymerase III chi subunit, HolC FIV03_23360 PF02789 Cytosol aminopeptidase family, N-terminal domain FIV03_23360 PF00883 Cytosol aminopeptidase family, catalytic domain FIV03_23380 PF00639 PPIC-type PPIASE domain FIV03_23380 PF09312 SurA N-terminal domain FIV03_23385 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FIV03_23390 PF00398 Ribosomal RNA adenine dimethylase FIV03_23400 PF03466 LysR substrate binding domain FIV03_23400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_23405 PF00625 Guanylate kinase FIV03_23410 PF03755 YicC-like family, N-terminal region FIV03_23410 PF08340 Domain of unknown function (DUF1732) FIV03_23415 PF02618 YceG-like family FIV03_23420 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_23420 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_23425 PF00550 Phosphopantetheine attachment site FIV03_23435 PF00698 Acyl transferase domain FIV03_23440 PF01250 Ribosomal protein S6 FIV03_23445 PF01084 Ribosomal protein S18 FIV03_23450 PF03948 Ribosomal protein L9, C-terminal domain FIV03_23450 PF01281 Ribosomal protein L9, N-terminal domain FIV03_23455 PF00772 DnaB-like helicase N terminal domain FIV03_23455 PF03796 DnaB-like helicase C terminal domain FIV03_23465 PF00842 Alanine racemase, C-terminal domain FIV03_23465 PF01168 Alanine racemase, N-terminal domain FIV03_23470 PF18073 Rubredoxin metal binding domain FIV03_23470 PF06745 KaiC FIV03_23475 PF02674 Colicin V production protein FIV03_23480 PF00156 Phosphoribosyl transferase domain FIV03_23480 PF13537 Glutamine amidotransferase domain FIV03_23485 PF00106 short chain dehydrogenase FIV03_23500 PF00459 Inositol monophosphatase family FIV03_23505 PF01926 50S ribosome-binding GTPase FIV03_23505 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FIV03_23510 PF13360 PQQ-like domain FIV03_23530 PF01475 Ferric uptake regulator family FIV03_23535 PF00950 ABC 3 transport family FIV03_23540 PF00005 ABC transporter FIV03_23545 PF00483 Nucleotidyl transferase FIV03_23545 PF01050 Mannose-6-phosphate isomerase FIV03_23550 PF00108 Thiolase, N-terminal domain FIV03_23550 PF02803 Thiolase, C-terminal domain FIV03_23570 PF03551 Transcriptional regulator PadR-like family FIV03_23570 PF10400 Virulence activator alpha C-term FIV03_23580 PF00873 AcrB/AcrD/AcrF family FIV03_23595 PF01066 CDP-alcohol phosphatidyltransferase FIV03_23600 PF02666 Phosphatidylserine decarboxylase FIV03_23605 PF03466 LysR substrate binding domain FIV03_23605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_23615 PF00664 ABC transporter transmembrane region FIV03_23615 PF00005 ABC transporter FIV03_23620 PF01022 Bacterial regulatory protein, arsR family FIV03_23625 PF01476 LysM domain FIV03_23630 PF03641 Possible lysine decarboxylase FIV03_23635 PF00072 Response regulator receiver domain FIV03_23635 PF00990 Diguanylate cyclase, GGDEF domain FIV03_23640 PF00892 EamA-like transporter family FIV03_23645 PF00682 HMGL-like FIV03_23645 PF08502 LeuA allosteric (dimerisation) domain FIV03_23665 PF09190 DALR domain FIV03_23665 PF01406 tRNA synthetases class I (C) catalytic domain FIV03_23670 PF01471 Putative peptidoglycan binding domain FIV03_23670 PF03734 L,D-transpeptidase catalytic domain FIV03_23680 PF01022 Bacterial regulatory protein, arsR family FIV03_23685 PF03466 LysR substrate binding domain FIV03_23685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_23700 PF05981 CreA protein FIV03_23725 PF00749 tRNA synthetases class I (E and Q), catalytic domain FIV03_23735 PF00795 Carbon-nitrogen hydrolase FIV03_23735 PF02540 NAD synthase FIV03_23740 PF00486 Transcriptional regulatory protein, C terminal FIV03_23740 PF00072 Response regulator receiver domain FIV03_23745 PF01474 Class-II DAHP synthetase family FIV03_23760 PF00266 Aminotransferase class-V FIV03_23765 PF03707 Bacterial signalling protein N terminal repeat FIV03_23765 PF00563 EAL domain FIV03_23765 PF00990 Diguanylate cyclase, GGDEF domain FIV03_23770 PF08448 PAS fold FIV03_23770 PF05231 MASE1 FIV03_23770 PF00990 Diguanylate cyclase, GGDEF domain FIV03_23770 PF13426 PAS domain FIV03_23770 PF08447 PAS fold FIV03_23770 PF00563 EAL domain FIV03_23775 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_23775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_23785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FIV03_23790 PF00672 HAMP domain FIV03_23790 PF02743 Cache domain FIV03_23790 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_23795 PF13419 Haloacid dehalogenase-like hydrolase FIV03_23960 PF00145 C-5 cytosine-specific DNA methylase FIV03_23975 PF00004 ATPase family associated with various cellular activities (AAA) FIV03_23975 PF17866 AAA lid domain FIV03_23980 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FIV03_23985 PF01555 DNA methylase FIV03_23985 PF18755 Restriction Enzyme Adenine Methylase Associated FIV03_24100 PF02348 Cytidylyltransferase FIV03_24110 PF03102 NeuB family FIV03_24110 PF08666 SAF domain FIV03_24115 PF00175 Oxidoreductase NAD-binding domain FIV03_24115 PF00970 Oxidoreductase FAD-binding domain FIV03_24125 PF03466 LysR substrate binding domain FIV03_24125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_24130 PF12833 Helix-turn-helix domain FIV03_24130 PF01965 DJ-1/PfpI family FIV03_24145 PF06224 Winged helix DNA-binding domain FIV03_24155 PF00293 NUDIX domain FIV03_24155 PF13344 Haloacid dehalogenase-like hydrolase FIV03_24165 PF00107 Zinc-binding dehydrogenase FIV03_24165 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_24170 PF00155 Aminotransferase class I and II FIV03_24175 PF01810 LysE type translocator FIV03_24200 PF01268 Formate--tetrahydrofolate ligase FIV03_24210 PF00440 Bacterial regulatory proteins, tetR family FIV03_24210 PF16859 Tetracyclin repressor-like, C-terminal domain FIV03_24215 PF02310 B12 binding domain FIV03_24215 PF02607 B12 binding domain FIV03_24230 PF02219 Methylenetetrahydrofolate reductase FIV03_24235 PF02310 B12 binding domain FIV03_24235 PF02607 B12 binding domain FIV03_24235 PF02574 Homocysteine S-methyltransferase FIV03_24235 PF02965 Vitamin B12 dependent methionine synthase, activation domain FIV03_24235 PF00809 Pterin binding enzyme FIV03_24250 PF00378 Enoyl-CoA hydratase/isomerase FIV03_24260 PF13380 CoA binding domain FIV03_24280 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_24285 PF02628 Cytochrome oxidase assembly protein FIV03_24320 PF02397 Bacterial sugar transferase FIV03_24355 PF00535 Glycosyl transferase family 2 FIV03_24360 PF00483 Nucleotidyl transferase FIV03_24365 PF04321 RmlD substrate binding domain FIV03_24370 PF16363 GDP-mannose 4,6 dehydratase FIV03_24375 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FIV03_24380 PF00557 Metallopeptidase family M24 FIV03_24380 PF01321 Creatinase/Prolidase N-terminal domain FIV03_24385 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_24395 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_24405 PF00005 ABC transporter FIV03_24405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_24410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_24410 PF00005 ABC transporter FIV03_24430 PF00067 Cytochrome P450 FIV03_24445 PF13411 MerR HTH family regulatory protein FIV03_24450 PF00216 Bacterial DNA-binding protein FIV03_24455 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FIV03_24455 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FIV03_24460 PF02504 Fatty acid synthesis protein FIV03_24480 PF03030 Inorganic H+ pyrophosphatase FIV03_24485 PF07690 Major Facilitator Superfamily FIV03_24490 PF02769 AIR synthase related protein, C-terminal domain FIV03_24490 PF00586 AIR synthase related protein, N-terminal domain FIV03_24495 PF01029 NusB family FIV03_24500 PF00885 6,7-dimethyl-8-ribityllumazine synthase FIV03_24505 PF00677 Lumazine binding domain FIV03_24510 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV03_24510 PF01872 RibD C-terminal domain FIV03_24515 PF03477 ATP cone domain FIV03_24520 PF00464 Serine hydroxymethyltransferase FIV03_24530 PF03734 L,D-transpeptidase catalytic domain FIV03_24530 PF01471 Putative peptidoglycan binding domain FIV03_24535 PF12802 MarR family FIV03_24540 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FIV03_24540 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FIV03_24550 PF00378 Enoyl-CoA hydratase/isomerase FIV03_24555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_24555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_24555 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_24560 PF00490 Delta-aminolevulinic acid dehydratase FIV03_24565 PF13291 ACT domain FIV03_24565 PF00291 Pyridoxal-phosphate dependent enzyme FIV03_24575 PF03073 TspO/MBR family FIV03_24580 PF02080 TrkA-C domain FIV03_24580 PF03600 Citrate transporter FIV03_24585 PF04377 Arginine-tRNA-protein transferase, C terminus FIV03_24585 PF04376 Arginine-tRNA-protein transferase, N terminus FIV03_24590 PF03167 Uracil DNA glycosylase superfamily FIV03_24600 PF01192 RNA polymerase Rpb6 FIV03_24605 PF13291 ACT domain FIV03_24605 PF02824 TGS domain FIV03_24605 PF04607 Region found in RelA / SpoT proteins FIV03_24610 PF00156 Phosphoribosyl transferase domain FIV03_24620 PF01648 4'-phosphopantetheinyl transferase superfamily FIV03_24625 PF10502 Signal peptidase, peptidase S26 FIV03_24630 PF00035 Double-stranded RNA binding motif FIV03_24630 PF14622 Ribonuclease-III-like FIV03_24635 PF01926 50S ribosome-binding GTPase FIV03_24635 PF07650 KH domain FIV03_24640 PF02565 Recombination protein O C terminal FIV03_24640 PF11967 Recombination protein O N terminal FIV03_24645 PF10502 Signal peptidase, peptidase S26 FIV03_24650 PF00563 EAL domain FIV03_24650 PF00990 Diguanylate cyclase, GGDEF domain FIV03_24650 PF08447 PAS fold FIV03_24650 PF08448 PAS fold FIV03_24655 PF00521 DNA gyrase/topoisomerase IV, subunit A FIV03_24655 PF03989 DNA gyrase C-terminal domain, beta-propeller FIV03_24660 PF12833 Helix-turn-helix domain FIV03_24660 PF02311 AraC-like ligand binding domain FIV03_24670 PF00465 Iron-containing alcohol dehydrogenase FIV03_24680 PF01668 SmpB protein FIV03_24685 PF00701 Dihydrodipicolinate synthetase family FIV03_24690 PF12697 Alpha/beta hydrolase family FIV03_24695 PF02530 Porin subfamily FIV03_24700 PF02530 Porin subfamily FIV03_24705 PF00905 Penicillin binding protein transpeptidase domain FIV03_24705 PF00912 Transglycosylase FIV03_24705 PF06832 Penicillin-Binding Protein C-terminus Family FIV03_24710 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FIV03_24710 PF00207 Alpha-2-macroglobulin family FIV03_24710 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FIV03_24710 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FIV03_24710 PF07703 Alpha-2-macroglobulin bait region domain FIV03_24710 PF17962 Bacterial macroglobulin domain 6 FIV03_24710 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FIV03_24710 PF01835 MG2 domain FIV03_24710 PF07678 A-macroglobulin TED domain FIV03_24715 PF13614 AAA domain FIV03_24720 PF03707 Bacterial signalling protein N terminal repeat FIV03_24720 PF00990 Diguanylate cyclase, GGDEF domain FIV03_24720 PF00563 EAL domain FIV03_24725 PF13406 Transglycosylase SLT domain FIV03_24730 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_24735 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_24745 PF00005 ABC transporter FIV03_24750 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_24780 PF01037 Lrp/AsnC ligand binding domain FIV03_24780 PF13404 AsnC-type helix-turn-helix domain FIV03_24795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_24795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_24805 PF00296 Luciferase-like monooxygenase FIV03_24810 PF00248 Aldo/keto reductase family FIV03_24815 PF01613 Flavin reductase like domain FIV03_24825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_24845 PF03601 Conserved hypothetical protein 698 FIV03_24850 PF01588 Putative tRNA binding domain FIV03_24850 PF09334 tRNA synthetases class I (M) FIV03_24850 PF00133 tRNA synthetases class I (I, L, M and V) FIV03_24855 PF00701 Dihydrodipicolinate synthetase family FIV03_24865 PF00440 Bacterial regulatory proteins, tetR family FIV03_24865 PF08360 QacR-like protein, C-terminal region FIV03_24870 PF03781 Sulfatase-modifying factor enzyme 1 FIV03_24870 PF12867 DinB superfamily FIV03_24875 PF10017 Histidine-specific methyltransferase, SAM-dependent FIV03_24880 PF00561 alpha/beta hydrolase fold FIV03_24900 PF00582 Universal stress protein family FIV03_24905 PF03466 LysR substrate binding domain FIV03_24905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_24910 PF00557 Metallopeptidase family M24 FIV03_24925 PF02798 Glutathione S-transferase, N-terminal domain FIV03_24930 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FIV03_24930 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FIV03_24930 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FIV03_24935 PF02233 NAD(P) transhydrogenase beta subunit FIV03_24940 PF17912 MalK OB fold domain FIV03_24940 PF00005 ABC transporter FIV03_24945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_24945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_24950 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_24965 PF07729 FCD domain FIV03_24965 PF00392 Bacterial regulatory proteins, gntR family FIV03_24970 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_24975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FIV03_24980 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_24990 PF17912 MalK OB fold domain FIV03_24990 PF00005 ABC transporter FIV03_24995 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25000 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25010 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_25030 PF00005 ABC transporter FIV03_25035 PF00005 ABC transporter FIV03_25040 PF02653 Branched-chain amino acid transport system / permease component FIV03_25040 PF11862 Domain of unknown function (DUF3382) FIV03_25045 PF02653 Branched-chain amino acid transport system / permease component FIV03_25055 PF13193 AMP-binding enzyme C-terminal domain FIV03_25055 PF00501 AMP-binding enzyme FIV03_25060 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_25060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_25060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_25065 PF00378 Enoyl-CoA hydratase/isomerase FIV03_25075 PF00106 short chain dehydrogenase FIV03_25080 PF01494 FAD binding domain FIV03_25085 PF00356 Bacterial regulatory proteins, lacI family FIV03_25090 PF00294 pfkB family carbohydrate kinase FIV03_25095 PF05025 RbsD / FucU transport protein family FIV03_25100 PF02653 Branched-chain amino acid transport system / permease component FIV03_25105 PF00005 ABC transporter FIV03_25110 PF13407 Periplasmic binding protein domain FIV03_25125 PF00171 Aldehyde dehydrogenase family FIV03_25130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_25130 PF00005 ABC transporter FIV03_25140 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_25150 PF01546 Peptidase family M20/M25/M40 FIV03_25150 PF07687 Peptidase dimerisation domain FIV03_25155 PF00196 Bacterial regulatory proteins, luxR family FIV03_25155 PF00072 Response regulator receiver domain FIV03_25160 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25170 PF00005 ABC transporter FIV03_25170 PF08402 TOBE domain FIV03_25180 PF00155 Aminotransferase class I and II FIV03_25180 PF00392 Bacterial regulatory proteins, gntR family FIV03_25185 PF00202 Aminotransferase class-III FIV03_25190 PF00106 short chain dehydrogenase FIV03_25195 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_25200 PF13407 Periplasmic binding protein domain FIV03_25205 PF02653 Branched-chain amino acid transport system / permease component FIV03_25210 PF00005 ABC transporter FIV03_25220 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FIV03_25220 PF08666 SAF domain FIV03_25225 PF07729 FCD domain FIV03_25225 PF00392 Bacterial regulatory proteins, gntR family FIV03_25230 PF00248 Aldo/keto reductase family FIV03_25235 PF05025 RbsD / FucU transport protein family FIV03_25245 PF01037 Lrp/AsnC ligand binding domain FIV03_25250 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_25255 PF01037 Lrp/AsnC ligand binding domain FIV03_25265 PF02653 Branched-chain amino acid transport system / permease component FIV03_25270 PF00005 ABC transporter FIV03_25275 PF00005 ABC transporter FIV03_25275 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_25310 PF01047 MarR family FIV03_25320 PF04199 Putative cyclase FIV03_25330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_25335 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25340 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25340 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_25345 PF00005 ABC transporter FIV03_25345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_25350 PF00005 ABC transporter FIV03_25350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_25360 PF13419 Haloacid dehalogenase-like hydrolase FIV03_25380 PF13247 4Fe-4S dicluster domain FIV03_25390 PF00175 Oxidoreductase NAD-binding domain FIV03_25390 PF00042 Globin FIV03_25390 PF00970 Oxidoreductase FAD-binding domain FIV03_25455 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25460 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25465 PF00440 Bacterial regulatory proteins, tetR family FIV03_25475 PF07690 Major Facilitator Superfamily FIV03_25490 PF02934 GatB/GatE catalytic domain FIV03_25490 PF02637 GatB domain FIV03_25495 PF01312 FlhB HrpN YscU SpaS Family FIV03_25520 PF09857 Putative toxin of bacterial toxin-antitoxin pair FIV03_25525 PF09278 MerR, DNA binding FIV03_25525 PF00376 MerR family regulatory protein FIV03_25545 PF00106 short chain dehydrogenase FIV03_25550 PF00072 Response regulator receiver domain FIV03_25550 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_25565 PF13302 Acetyltransferase (GNAT) domain FIV03_25565 PF00027 Cyclic nucleotide-binding domain FIV03_25570 PF00664 ABC transporter transmembrane region FIV03_25570 PF00005 ABC transporter FIV03_25580 PF00534 Glycosyl transferases group 1 FIV03_25585 PF00534 Glycosyl transferases group 1 FIV03_25585 PF13439 Glycosyltransferase Family 4 FIV03_25590 PF03033 Glycosyltransferase family 28 N-terminal domain FIV03_25590 PF04101 Glycosyltransferase family 28 C-terminal domain FIV03_25605 PF01625 Peptide methionine sulfoxide reductase FIV03_25610 PF00583 Acetyltransferase (GNAT) family FIV03_25620 PF01494 FAD binding domain FIV03_25625 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FIV03_25630 PF02979 Nitrile hydratase, alpha chain FIV03_25635 PF02211 Nitrile hydratase beta subunit FIV03_25645 PF04191 Phospholipid methyltransferase FIV03_25650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_25650 PF03466 LysR substrate binding domain FIV03_25665 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_25665 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25670 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_25680 PF00005 ABC transporter FIV03_25680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_25685 PF00211 Adenylate and Guanylate cyclase catalytic domain FIV03_25690 PF00293 NUDIX domain FIV03_25695 PF02515 CoA-transferase family III FIV03_25705 PF01433 Peptidase family M1 domain FIV03_25705 PF11940 Domain of unknown function (DUF3458) Ig-like fold FIV03_25705 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FIV03_25710 PF00512 His Kinase A (phospho-acceptor) domain FIV03_25710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_25710 PF00989 PAS fold FIV03_25720 PF03710 Glutamate-ammonia ligase adenylyltransferase FIV03_25720 PF08335 GlnD PII-uridylyltransferase FIV03_25725 PF00512 His Kinase A (phospho-acceptor) domain FIV03_25725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_25730 PF00486 Transcriptional regulatory protein, C terminal FIV03_25730 PF00072 Response regulator receiver domain FIV03_25735 PF13180 PDZ domain FIV03_25755 PF01812 5-formyltetrahydrofolate cyclo-ligase family FIV03_25770 PF03918 Cytochrome C biogenesis protein FIV03_25775 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FIV03_25775 PF01578 Cytochrome C assembly protein FIV03_25780 PF03100 CcmE FIV03_25800 PF00672 HAMP domain FIV03_25800 PF16527 Two-component sensor protein CpxA, periplasmic domain FIV03_25800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_25800 PF00512 His Kinase A (phospho-acceptor) domain FIV03_25805 PF00486 Transcriptional regulatory protein, C terminal FIV03_25805 PF00072 Response regulator receiver domain FIV03_25815 PF13439 Glycosyltransferase Family 4 FIV03_25815 PF00534 Glycosyl transferases group 1 FIV03_25840 PF00356 Bacterial regulatory proteins, lacI family FIV03_25850 PF04116 Fatty acid hydroxylase superfamily FIV03_25855 PF12146 Serine aminopeptidase, S33 FIV03_25855 PF13026 Protein of unknown function (DUF3887) FIV03_25875 PF00563 EAL domain FIV03_25875 PF12792 CSS motif domain associated with EAL FIV03_25900 PF01894 Uncharacterised protein family UPF0047 FIV03_25905 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase FIV03_25905 PF03033 Glycosyltransferase family 28 N-terminal domain FIV03_25910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_25910 PF03466 LysR substrate binding domain FIV03_25920 PF01645 Conserved region in glutamate synthase FIV03_25930 PF00664 ABC transporter transmembrane region FIV03_25930 PF00005 ABC transporter FIV03_25940 PF03707 Bacterial signalling protein N terminal repeat FIV03_25940 PF00990 Diguanylate cyclase, GGDEF domain FIV03_25940 PF00563 EAL domain FIV03_25940 PF13188 PAS domain FIV03_25950 PF01042 Endoribonuclease L-PSP FIV03_25970 PF00005 ABC transporter FIV03_25970 PF12848 ABC transporter FIV03_25980 PF01022 Bacterial regulatory protein, arsR family FIV03_25985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_25985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_26000 PF03466 LysR substrate binding domain FIV03_26000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26005 PF01266 FAD dependent oxidoreductase FIV03_26005 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FIV03_26020 PF04073 Aminoacyl-tRNA editing domain FIV03_26025 PF16363 GDP-mannose 4,6 dehydratase FIV03_26030 PF00009 Elongation factor Tu GTP binding domain FIV03_26035 PF01507 Phosphoadenosine phosphosulfate reductase family FIV03_26040 PF00459 Inositol monophosphatase family FIV03_26090 PF05860 haemagglutination activity domain FIV03_26090 PF05594 Haemagluttinin repeat FIV03_26090 PF13332 Hemagglutinin repeat FIV03_26090 PF04829 Pre-toxin domain with VENN motif FIV03_26090 PF15526 Novel toxin 21 FIV03_26095 PF08479 POTRA domain, ShlB-type FIV03_26095 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB FIV03_26095 PF17287 POTRA domain FIV03_26115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FIV03_26115 PF00356 Bacterial regulatory proteins, lacI family FIV03_26125 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_26135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_26140 PF00873 AcrB/AcrD/AcrF family FIV03_26150 PF00950 ABC 3 transport family FIV03_26155 PF00950 ABC 3 transport family FIV03_26160 PF00005 ABC transporter FIV03_26165 PF01297 Zinc-uptake complex component A periplasmic FIV03_26175 PF01494 FAD binding domain FIV03_26190 PF00753 Metallo-beta-lactamase superfamily FIV03_26205 PF04209 homogentisate 1,2-dioxygenase FIV03_26255 PF03466 LysR substrate binding domain FIV03_26255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26260 PF07690 Major Facilitator Superfamily FIV03_26275 PF13193 AMP-binding enzyme C-terminal domain FIV03_26275 PF00501 AMP-binding enzyme FIV03_26280 PF03006 Haemolysin-III related FIV03_26285 PF17969 L,D-transpeptidase C-terminal domain FIV03_26285 PF01476 LysM domain FIV03_26285 PF03734 L,D-transpeptidase catalytic domain FIV03_26290 PF01244 Membrane dipeptidase (Peptidase family M19) FIV03_26295 PF00392 Bacterial regulatory proteins, gntR family FIV03_26295 PF07702 UTRA domain FIV03_26300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_26300 PF00005 ABC transporter FIV03_26305 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_26305 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_26310 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_26315 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_26330 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_26330 PF00970 Oxidoreductase FAD-binding domain FIV03_26330 PF00175 Oxidoreductase NAD-binding domain FIV03_26345 PF00109 Beta-ketoacyl synthase, N-terminal domain FIV03_26345 PF02801 Beta-ketoacyl synthase, C-terminal domain FIV03_26360 PF06155 Protein of unknown function (DUF971) FIV03_26360 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FIV03_26380 PF00849 RNA pseudouridylate synthase FIV03_26380 PF01479 S4 domain FIV03_26385 PF05175 Methyltransferase small domain FIV03_26385 PF08468 Methyltransferase small domain N-terminal FIV03_26400 PF11339 Protein of unknown function (DUF3141) FIV03_26410 PF00141 Peroxidase FIV03_26415 PF03466 LysR substrate binding domain FIV03_26415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26435 PF03466 LysR substrate binding domain FIV03_26450 PF07015 VirC1 protein FIV03_26455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_26460 PF00005 ABC transporter FIV03_26470 PF00892 EamA-like transporter family FIV03_26475 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_26480 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_26485 PF00005 ABC transporter FIV03_26495 PF00486 Transcriptional regulatory protein, C terminal FIV03_26495 PF00072 Response regulator receiver domain FIV03_26500 PF00072 Response regulator receiver domain FIV03_26500 PF13426 PAS domain FIV03_26500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_26510 PF05209 Septum formation inhibitor MinC, N-terminal domain FIV03_26510 PF03775 Septum formation inhibitor MinC, C-terminal domain FIV03_26515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV03_26520 PF03776 Septum formation topological specificity factor MinE FIV03_26525 PF03707 Bacterial signalling protein N terminal repeat FIV03_26525 PF00990 Diguanylate cyclase, GGDEF domain FIV03_26525 PF00563 EAL domain FIV03_26530 PF00009 Elongation factor Tu GTP binding domain FIV03_26530 PF16658 Class II release factor RF3, C-terminal domain FIV03_26540 PF10755 Protein of unknown function (DUF2585) FIV03_26545 PF00356 Bacterial regulatory proteins, lacI family FIV03_26550 PF00005 ABC transporter FIV03_26555 PF02653 Branched-chain amino acid transport system / permease component FIV03_26560 PF13407 Periplasmic binding protein domain FIV03_26570 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_26570 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_26575 PF13407 Periplasmic binding protein domain FIV03_26580 PF00005 ABC transporter FIV03_26585 PF02653 Branched-chain amino acid transport system / permease component FIV03_26590 PF02653 Branched-chain amino acid transport system / permease component FIV03_26595 PF00392 Bacterial regulatory proteins, gntR family FIV03_26595 PF07729 FCD domain FIV03_26600 PF00171 Aldehyde dehydrogenase family FIV03_26605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_26610 PF00920 Dehydratase family FIV03_26620 PF02653 Branched-chain amino acid transport system / permease component FIV03_26625 PF00005 ABC transporter FIV03_26630 PF13407 Periplasmic binding protein domain FIV03_26635 PF03466 LysR substrate binding domain FIV03_26635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26645 PF02872 5'-nucleotidase, C-terminal domain FIV03_26645 PF00149 Calcineurin-like phosphoesterase FIV03_26650 PF03884 DNA gyrase inhibitor YacG FIV03_26655 PF02545 Maf-like protein FIV03_26660 PF01176 Translation initiation factor 1A / IF-1 FIV03_26665 PF13302 Acetyltransferase (GNAT) domain FIV03_26675 PF06793 Uncharacterised protein family (UPF0262) FIV03_26680 PF00815 Histidinol dehydrogenase FIV03_26700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FIV03_26725 PF02567 Phenazine biosynthesis-like protein FIV03_26730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_26730 PF03466 LysR substrate binding domain FIV03_26740 PF01734 Patatin-like phospholipase FIV03_26745 PF00990 Diguanylate cyclase, GGDEF domain FIV03_26745 PF00072 Response regulator receiver domain FIV03_26750 PF01627 Hpt domain FIV03_26750 PF00512 His Kinase A (phospho-acceptor) domain FIV03_26750 PF00072 Response regulator receiver domain FIV03_26750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_26755 PF13458 Periplasmic binding protein FIV03_26760 PF11862 Domain of unknown function (DUF3382) FIV03_26760 PF02653 Branched-chain amino acid transport system / permease component FIV03_26770 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_26770 PF00005 ABC transporter FIV03_26775 PF00005 ABC transporter FIV03_26780 PF03069 Acetamidase/Formamidase family FIV03_26790 PF05159 Capsule polysaccharide biosynthesis protein FIV03_26810 PF05159 Capsule polysaccharide biosynthesis protein FIV03_26820 PF00005 ABC transporter FIV03_26830 PF00012 Hsp70 protein FIV03_26845 PF07228 Stage II sporulation protein E (SpoIIE) FIV03_26845 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain FIV03_26865 PF01903 CbiX FIV03_26870 PF02570 Precorrin-8X methylmutase FIV03_26880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_26885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_26890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_26890 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FIV03_26895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_26900 PF01209 ubiE/COQ5 methyltransferase family FIV03_26905 PF07685 CobB/CobQ-like glutamine amidotransferase domain FIV03_26905 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FIV03_26910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_26915 PF01888 CbiD FIV03_26920 PF02571 Precorrin-6x reductase CbiJ/CobK FIV03_26925 PF03808 Glycosyl transferase WecB/TagA/CpsF family FIV03_26930 PF00132 Bacterial transferase hexapeptide (six repeats) FIV03_26935 PF13439 Glycosyltransferase Family 4 FIV03_26935 PF00534 Glycosyl transferases group 1 FIV03_26960 PF01501 Glycosyl transferase family 8 FIV03_26960 PF00535 Glycosyl transferase family 2 FIV03_26995 PF00550 Phosphopantetheine attachment site FIV03_27010 PF00534 Glycosyl transferases group 1 FIV03_27010 PF13439 Glycosyltransferase Family 4 FIV03_27025 PF00535 Glycosyl transferase family 2 FIV03_27030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FIV03_27035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FIV03_27035 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FIV03_27040 PF04552 Sigma-54, DNA binding domain FIV03_27040 PF04963 Sigma-54 factor, core binding domain FIV03_27040 PF00309 Sigma-54 factor, Activator interacting domain (AID) FIV03_27045 PF00005 ABC transporter FIV03_27060 PF01612 3'-5' exonuclease FIV03_27060 PF00476 DNA polymerase family A FIV03_27065 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV03_27065 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV03_27070 PF00376 MerR family regulatory protein FIV03_27070 PF09278 MerR, DNA binding FIV03_27075 PF04945 YHS domain FIV03_27080 PF00005 ABC transporter FIV03_27085 PF00005 ABC transporter FIV03_27085 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_27095 PF02653 Branched-chain amino acid transport system / permease component FIV03_27110 PF00171 Aldehyde dehydrogenase family FIV03_27120 PF00893 Small Multidrug Resistance protein FIV03_27130 PF01370 NAD dependent epimerase/dehydratase family FIV03_27135 PF07690 Major Facilitator Superfamily FIV03_27150 PF02673 Bacitracin resistance protein BacA FIV03_27155 PF00043 Glutathione S-transferase, C-terminal domain FIV03_27155 PF13417 Glutathione S-transferase, N-terminal domain FIV03_27160 PF08331 Domain of unknown function (DUF1730) FIV03_27170 PF12838 4Fe-4S dicluster domain FIV03_27170 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FIV03_27170 PF01568 Molydopterin dinucleotide binding domain FIV03_27170 PF00384 Molybdopterin oxidoreductase FIV03_27170 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FIV03_27175 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FIV03_27175 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FIV03_27175 PF10531 SLBB domain FIV03_27180 PF00293 NUDIX domain FIV03_27190 PF03572 Peptidase family S41 FIV03_27190 PF13180 PDZ domain FIV03_27195 PF01551 Peptidase family M23 FIV03_27205 PF02590 Predicted SPOUT methyltransferase FIV03_27215 PF01467 Cytidylyltransferase-like FIV03_27220 PF00171 Aldehyde dehydrogenase family FIV03_27225 PF00696 Amino acid kinase family FIV03_27225 PF01472 PUA domain FIV03_27230 PF01018 GTP1/OBG FIV03_27230 PF01926 50S ribosome-binding GTPase FIV03_27235 PF13302 Acetyltransferase (GNAT) domain FIV03_27250 PF01016 Ribosomal L27 protein FIV03_27255 PF00829 Ribosomal prokaryotic L21 protein FIV03_27275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_27275 PF03466 LysR substrate binding domain FIV03_27280 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_27290 PF03401 Tripartite tricarboxylate transporter family receptor FIV03_27295 PF03737 Aldolase/RraA FIV03_27300 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_27300 PF01842 ACT domain FIV03_27300 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_27305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_27305 PF03466 LysR substrate binding domain FIV03_27310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_27325 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FIV03_27325 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FIV03_27330 PF01799 [2Fe-2S] binding domain FIV03_27330 PF00111 2Fe-2S iron-sulfur cluster binding domain FIV03_27335 PF00941 FAD binding domain in molybdopterin dehydrogenase FIV03_27335 PF03450 CO dehydrogenase flavoprotein C-terminal domain FIV03_27340 PF00440 Bacterial regulatory proteins, tetR family FIV03_27345 PF00364 Biotin-requiring enzyme FIV03_27345 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV03_27345 PF02817 e3 binding domain FIV03_27350 PF00171 Aldehyde dehydrogenase family FIV03_27355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FIV03_27355 PF00364 Biotin-requiring enzyme FIV03_27355 PF02817 e3 binding domain FIV03_27360 PF02779 Transketolase, pyrimidine binding domain FIV03_27360 PF02780 Transketolase, C-terminal domain FIV03_27365 PF00676 Dehydrogenase E1 component FIV03_27370 PF00557 Metallopeptidase family M24 FIV03_27380 PF01547 Bacterial extracellular solute-binding protein FIV03_27385 PF13407 Periplasmic binding protein domain FIV03_27395 PF02653 Branched-chain amino acid transport system / permease component FIV03_27400 PF02653 Branched-chain amino acid transport system / permease component FIV03_27405 PF00005 ABC transporter FIV03_27425 PF07729 FCD domain FIV03_27425 PF00392 Bacterial regulatory proteins, gntR family FIV03_27430 PF00072 Response regulator receiver domain FIV03_27430 PF00990 Diguanylate cyclase, GGDEF domain FIV03_27435 PF00512 His Kinase A (phospho-acceptor) domain FIV03_27435 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_27435 PF00072 Response regulator receiver domain FIV03_27435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_27435 PF01627 Hpt domain FIV03_27445 PF02653 Branched-chain amino acid transport system / permease component FIV03_27455 PF00005 ABC transporter FIV03_27455 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_27460 PF00005 ABC transporter FIV03_27465 PF01546 Peptidase family M20/M25/M40 FIV03_27465 PF07687 Peptidase dimerisation domain FIV03_27470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FIV03_27470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FIV03_27470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FIV03_27475 PF02397 Bacterial sugar transferase FIV03_27480 PF01220 Dehydroquinase class II FIV03_27490 PF00072 Response regulator receiver domain FIV03_27490 PF00486 Transcriptional regulatory protein, C terminal FIV03_27500 PF08242 Methyltransferase domain FIV03_27505 PF03597 Cytochrome oxidase maturation protein cbb3-type FIV03_27510 PF00403 Heavy-metal-associated domain FIV03_27520 PF13746 4Fe-4S dicluster domain FIV03_27520 PF12801 4Fe-4S binding domain FIV03_27520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FIV03_27525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV03_27525 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV03_27540 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV03_27545 PF00892 EamA-like transporter family FIV03_27550 PF03466 LysR substrate binding domain FIV03_27550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_27555 PF00464 Serine hydroxymethyltransferase FIV03_27575 PF04055 Radical SAM superfamily FIV03_27580 PF13545 Crp-like helix-turn-helix domain FIV03_27580 PF00027 Cyclic nucleotide-binding domain FIV03_27585 PF00072 Response regulator receiver domain FIV03_27585 PF00486 Transcriptional regulatory protein, C terminal FIV03_27590 PF00196 Bacterial regulatory proteins, luxR family FIV03_27590 PF00072 Response regulator receiver domain FIV03_27595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_27595 PF00512 His Kinase A (phospho-acceptor) domain FIV03_27595 PF00989 PAS fold FIV03_27600 PF00155 Aminotransferase class I and II FIV03_27605 PF00672 HAMP domain FIV03_27605 PF01627 Hpt domain FIV03_27605 PF00072 Response regulator receiver domain FIV03_27605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_27605 PF00512 His Kinase A (phospho-acceptor) domain FIV03_27610 PF08448 PAS fold FIV03_27610 PF08447 PAS fold FIV03_27610 PF00563 EAL domain FIV03_27610 PF00990 Diguanylate cyclase, GGDEF domain FIV03_27615 PF00072 Response regulator receiver domain FIV03_27615 PF00196 Bacterial regulatory proteins, luxR family FIV03_27630 PF04679 ATP dependent DNA ligase C terminal region FIV03_27630 PF01068 ATP dependent DNA ligase domain FIV03_27630 PF04675 DNA ligase N terminus FIV03_27635 PF00270 DEAD/DEAH box helicase FIV03_27635 PF00271 Helicase conserved C-terminal domain FIV03_27650 PF04675 DNA ligase N terminus FIV03_27650 PF01068 ATP dependent DNA ligase domain FIV03_27650 PF04679 ATP dependent DNA ligase C terminal region FIV03_27660 PF08494 DEAD/H associated FIV03_27660 PF00270 DEAD/DEAH box helicase FIV03_27660 PF00271 Helicase conserved C-terminal domain FIV03_27680 PF01594 AI-2E family transporter FIV03_27690 PF01925 Sulfite exporter TauE/SafE FIV03_27700 PF13411 MerR HTH family regulatory protein FIV03_27705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_27705 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_27705 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIV03_27705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_27715 PF02803 Thiolase, C-terminal domain FIV03_27715 PF00108 Thiolase, N-terminal domain FIV03_27725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_27725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_27725 PF00378 Enoyl-CoA hydratase/isomerase FIV03_27730 PF12833 Helix-turn-helix domain FIV03_27730 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FIV03_27745 PF00850 Histone deacetylase domain FIV03_27750 PF01554 MatE FIV03_27755 PF01180 Dihydroorotate dehydrogenase FIV03_27775 PF00672 HAMP domain FIV03_27775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_27780 PF03807 NADP oxidoreductase coenzyme F420-dependent FIV03_27780 PF14748 Pyrroline-5-carboxylate reductase dimerisation FIV03_27785 PF01921 tRNA synthetases class I (K) FIV03_27805 PF04379 ApaG domain FIV03_27810 PF01066 CDP-alcohol phosphatidyltransferase FIV03_27815 PF01053 Cys/Met metabolism PLP-dependent enzyme FIV03_27820 PF00692 dUTPase FIV03_27825 PF09186 Domain of unknown function (DUF1949) FIV03_27825 PF01205 Uncharacterized protein family UPF0029 FIV03_27850 PF00497 Bacterial extracellular solute-binding proteins, family 3 FIV03_27865 PF01430 Hsp33 protein FIV03_27870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FIV03_27870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FIV03_27875 PF00202 Aminotransferase class-III FIV03_27890 PF00486 Transcriptional regulatory protein, C terminal FIV03_27890 PF00072 Response regulator receiver domain FIV03_27895 PF01895 PhoU domain FIV03_27900 PF00005 ABC transporter FIV03_27905 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_27910 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_27925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_27925 PF00512 His Kinase A (phospho-acceptor) domain FIV03_27925 PF16736 Single Cache-like FIV03_27925 PF00989 PAS fold FIV03_27940 PF03668 P-loop ATPase protein family FIV03_27955 PF01544 CorA-like Mg2+ transporter protein FIV03_27960 PF01243 Pyridoxamine 5'-phosphate oxidase FIV03_27960 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FIV03_27970 PF01556 DnaJ C terminal domain FIV03_27970 PF00226 DnaJ domain FIV03_28005 PF01266 FAD dependent oxidoreductase FIV03_28020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_28020 PF03466 LysR substrate binding domain FIV03_28025 PF00732 GMC oxidoreductase FIV03_28025 PF05199 GMC oxidoreductase FIV03_28035 PF13378 Enolase C-terminal domain-like FIV03_28035 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_28040 PF03707 Bacterial signalling protein N terminal repeat FIV03_28040 PF13188 PAS domain FIV03_28040 PF00563 EAL domain FIV03_28040 PF00990 Diguanylate cyclase, GGDEF domain FIV03_28045 PF01274 Malate synthase FIV03_28060 PF00999 Sodium/hydrogen exchanger family FIV03_28065 PF00924 Mechanosensitive ion channel FIV03_28065 PF05552 Conserved TM helix FIV03_28075 PF01638 HxlR-like helix-turn-helix FIV03_28090 PF00378 Enoyl-CoA hydratase/isomerase FIV03_28095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_28095 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_28095 PF12806 Acetyl-CoA dehydrogenase C-terminal like FIV03_28095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_28100 PF03481 Putative GTP-binding controlling metal-binding FIV03_28100 PF01300 Telomere recombination FIV03_28105 PF00850 Histone deacetylase domain FIV03_28110 PF02609 Exonuclease VII small subunit FIV03_28120 PF02780 Transketolase, C-terminal domain FIV03_28120 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FIV03_28120 PF02779 Transketolase, pyrimidine binding domain FIV03_28125 PF07690 Major Facilitator Superfamily FIV03_28140 PF02630 SCO1/SenC FIV03_28150 PF01479 S4 domain FIV03_28150 PF01728 FtsJ-like methyltransferase FIV03_28155 PF05958 tRNA (Uracil-5-)-methyltransferase FIV03_28160 PF08241 Methyltransferase domain FIV03_28165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FIV03_28165 PF00925 GTP cyclohydrolase II FIV03_28175 PF01738 Dienelactone hydrolase family FIV03_28180 PF01264 Chorismate synthase FIV03_28185 PF00563 EAL domain FIV03_28185 PF00990 Diguanylate cyclase, GGDEF domain FIV03_28185 PF03707 Bacterial signalling protein N terminal repeat FIV03_28200 PF00300 Histidine phosphatase superfamily (branch 1) FIV03_28210 PF02913 FAD linked oxidases, C-terminal domain FIV03_28210 PF01565 FAD binding domain FIV03_28225 PF00005 ABC transporter FIV03_28230 PF02653 Branched-chain amino acid transport system / permease component FIV03_28235 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_28235 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_28245 PF07729 FCD domain FIV03_28245 PF00392 Bacterial regulatory proteins, gntR family FIV03_28285 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FIV03_28285 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FIV03_28290 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_28300 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_28305 PF00732 GMC oxidoreductase FIV03_28305 PF05199 GMC oxidoreductase FIV03_28310 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_28330 PF00701 Dihydrodipicolinate synthetase family FIV03_28335 PF01177 Asp/Glu/Hydantoin racemase FIV03_28340 PF01979 Amidohydrolase family FIV03_28345 PF01979 Amidohydrolase family FIV03_28350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_28355 PF00005 ABC transporter FIV03_28355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_28360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_28360 PF00005 ABC transporter FIV03_28365 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28365 PF12911 N-terminal TM domain of oligopeptide transport permease C FIV03_28370 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_28385 PF00392 Bacterial regulatory proteins, gntR family FIV03_28385 PF07729 FCD domain FIV03_28390 PF01979 Amidohydrolase family FIV03_28410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_28410 PF00005 ABC transporter FIV03_28415 PF00005 ABC transporter FIV03_28415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_28425 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28430 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_28435 PF01381 Helix-turn-helix FIV03_28455 PF01676 Metalloenzyme superfamily FIV03_28455 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FIV03_28460 PF01966 HD domain FIV03_28465 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FIV03_28465 PF06155 Protein of unknown function (DUF971) FIV03_28470 PF03466 LysR substrate binding domain FIV03_28470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_28480 PF00202 Aminotransferase class-III FIV03_28490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_28530 PF00920 Dehydratase family FIV03_28535 PF00171 Aldehyde dehydrogenase family FIV03_28550 PF01614 Bacterial transcriptional regulator FIV03_28550 PF09339 IclR helix-turn-helix domain FIV03_28560 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28565 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28570 PF00005 ABC transporter FIV03_28570 PF17912 MalK OB fold domain FIV03_28575 PF02371 Transposase IS116/IS110/IS902 family FIV03_28575 PF01548 Transposase FIV03_28595 PF03781 Sulfatase-modifying factor enzyme 1 FIV03_28600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_28610 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_28615 PF00884 Sulfatase FIV03_28630 PF13419 Haloacid dehalogenase-like hydrolase FIV03_28635 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_28635 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_28640 PF00455 DeoR C terminal sensor domain FIV03_28640 PF08220 DeoR-like helix-turn-helix domain FIV03_28645 PF00106 short chain dehydrogenase FIV03_28650 PF17912 MalK OB fold domain FIV03_28650 PF00005 ABC transporter FIV03_28655 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28665 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28670 PF03437 BtpA family FIV03_28675 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_28680 PF05406 WGR domain FIV03_28685 PF07756 Protein of unknown function (DUF1612) FIV03_28685 PF11972 HTH DNA binding domain FIV03_28690 PF02899 Phage integrase, N-terminal SAM-like domain FIV03_28690 PF00589 Phage integrase family FIV03_28695 PF07690 Major Facilitator Superfamily FIV03_28710 PF07715 TonB-dependent Receptor Plug Domain FIV03_28715 PF03364 Polyketide cyclase / dehydrase and lipid transport FIV03_28715 PF00891 O-methyltransferase domain FIV03_28725 PF00550 Phosphopantetheine attachment site FIV03_28725 PF00857 Isochorismatase family FIV03_28730 PF00501 AMP-binding enzyme FIV03_28730 PF13193 AMP-binding enzyme C-terminal domain FIV03_28735 PF00425 chorismate binding enzyme FIV03_28740 PF00668 Condensation domain FIV03_28740 PF00550 Phosphopantetheine attachment site FIV03_28740 PF00501 AMP-binding enzyme FIV03_28745 PF00550 Phosphopantetheine attachment site FIV03_28745 PF00668 Condensation domain FIV03_28745 PF00501 AMP-binding enzyme FIV03_28745 PF08242 Methyltransferase domain FIV03_28750 PF00975 Thioesterase domain FIV03_28750 PF00668 Condensation domain FIV03_28750 PF00550 Phosphopantetheine attachment site FIV03_28750 PF00501 AMP-binding enzyme FIV03_28755 PF00356 Bacterial regulatory proteins, lacI family FIV03_28760 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FIV03_28760 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FIV03_28765 PF01261 Xylose isomerase-like TIM barrel FIV03_28770 PF01547 Bacterial extracellular solute-binding protein FIV03_28775 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28780 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_28785 PF03459 TOBE domain FIV03_28785 PF00005 ABC transporter FIV03_28785 PF17912 MalK OB fold domain FIV03_28790 PF01323 DSBA-like thioredoxin domain FIV03_28795 PF00893 Small Multidrug Resistance protein FIV03_28800 PF00893 Small Multidrug Resistance protein FIV03_28805 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FIV03_28810 PF12802 MarR family FIV03_28815 PF03466 LysR substrate binding domain FIV03_28815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_28820 PF03358 NADPH-dependent FMN reductase FIV03_28830 PF01810 LysE type translocator FIV03_28835 PF02627 Carboxymuconolactone decarboxylase family FIV03_28840 PF08281 Sigma-70, region 4 FIV03_28840 PF04542 Sigma-70 region 2 FIV03_28840 PF12680 SnoaL-like domain FIV03_28845 PF07690 Major Facilitator Superfamily FIV03_28880 PF02567 Phenazine biosynthesis-like protein FIV03_28885 PF03466 LysR substrate binding domain FIV03_28885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_28900 PF07730 Histidine kinase FIV03_28900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_28900 PF05384 Sensor protein DegS FIV03_28905 PF13407 Periplasmic binding protein domain FIV03_28910 PF00005 ABC transporter FIV03_28920 PF02653 Branched-chain amino acid transport system / permease component FIV03_28925 PF08450 SMP-30/Gluconolactonase/LRE-like region FIV03_28930 PF00107 Zinc-binding dehydrogenase FIV03_28930 PF08240 Alcohol dehydrogenase GroES-like domain FIV03_28935 PF00005 ABC transporter FIV03_28945 PF02653 Branched-chain amino acid transport system / permease component FIV03_28955 PF00248 Aldo/keto reductase family FIV03_28960 PF08125 Mannitol dehydrogenase C-terminal domain FIV03_28960 PF01232 Mannitol dehydrogenase Rossmann domain FIV03_28965 PF00480 ROK family FIV03_28975 PF13407 Periplasmic binding protein domain FIV03_28980 PF00005 ABC transporter FIV03_28985 PF02653 Branched-chain amino acid transport system / permease component FIV03_29000 PF14760 Rnk N-terminus FIV03_29000 PF01272 Transcription elongation factor, GreA/GreB, C-term FIV03_29015 PF00108 Thiolase, N-terminal domain FIV03_29015 PF02803 Thiolase, C-terminal domain FIV03_29025 PF00534 Glycosyl transferases group 1 FIV03_29025 PF13439 Glycosyltransferase Family 4 FIV03_29040 PF00034 Cytochrome c FIV03_29045 PF00155 Aminotransferase class I and II FIV03_29050 PF00027 Cyclic nucleotide-binding domain FIV03_29050 PF13545 Crp-like helix-turn-helix domain FIV03_29065 PF00510 Cytochrome c oxidase subunit III FIV03_29070 PF00092 von Willebrand factor type A domain FIV03_29075 PF07728 AAA domain (dynein-related subfamily) FIV03_29075 PF08406 CbbQ/NirQ/NorQ C-terminal FIV03_29080 PF00115 Cytochrome C and Quinol oxidase polypeptide I FIV03_29085 PF00034 Cytochrome c FIV03_29090 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV03_29095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FIV03_29100 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV03_29115 PF17805 AsnC-like ligand binding domain FIV03_29115 PF13404 AsnC-type helix-turn-helix domain FIV03_29120 PF17805 AsnC-like ligand binding domain FIV03_29150 PF02424 ApbE family FIV03_29155 PF05573 NosL FIV03_29160 PF12679 ABC-2 family transporter protein FIV03_29165 PF00005 ABC transporter FIV03_29170 PF05048 Periplasmic copper-binding protein (NosD) FIV03_29175 PF13473 Cupredoxin-like domain FIV03_29175 PF18764 Nitrous oxide reductase propeller repeat FIV03_29175 PF18793 Nitrous oxide reductase propeller repeat 2 FIV03_29180 PF04205 FMN-binding domain FIV03_29180 PF12801 4Fe-4S binding domain FIV03_29190 PF01571 Aminomethyltransferase folate-binding domain FIV03_29190 PF01266 FAD dependent oxidoreductase FIV03_29190 PF16350 FAD dependent oxidoreductase central domain FIV03_29190 PF08669 Glycine cleavage T-protein C-terminal barrel domain FIV03_29215 PF07690 Major Facilitator Superfamily FIV03_29245 PF07715 TonB-dependent Receptor Plug Domain FIV03_29245 PF00593 TonB dependent receptor FIV03_29280 PF00005 ABC transporter FIV03_29285 PF01032 FecCD transport family FIV03_29290 PF01032 FecCD transport family FIV03_29300 PF00440 Bacterial regulatory proteins, tetR family FIV03_29300 PF17932 Tetracyclin repressor-like, C-terminal domain FIV03_29310 PF00005 ABC transporter FIV03_29315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_29315 PF00005 ABC transporter FIV03_29325 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FIV03_29335 PF08753 NikR C terminal nickel binding domain FIV03_29335 PF01402 Ribbon-helix-helix protein, copG family FIV03_29350 PF07972 NrdI Flavodoxin like FIV03_29355 PF00317 Ribonucleotide reductase, all-alpha domain FIV03_29355 PF08343 Ribonucleotide reductase N-terminal FIV03_29355 PF02867 Ribonucleotide reductase, barrel domain FIV03_29360 PF00268 Ribonucleotide reductase, small chain FIV03_29375 PF00005 ABC transporter FIV03_29375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FIV03_29380 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29405 PF01022 Bacterial regulatory protein, arsR family FIV03_29440 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FIV03_29445 PF02441 Flavoprotein FIV03_29455 PF07670 Nucleoside recognition FIV03_29455 PF02421 Ferrous iron transport protein B FIV03_29455 PF07664 Ferrous iron transport protein B C terminus FIV03_29460 PF02734 DAK2 domain FIV03_29460 PF02733 Dak1 domain FIV03_29465 PF02734 DAK2 domain FIV03_29470 PF02733 Dak1 domain FIV03_29475 PF02653 Branched-chain amino acid transport system / permease component FIV03_29485 PF00005 ABC transporter FIV03_29490 PF02653 Branched-chain amino acid transport system / permease component FIV03_29495 PF00294 pfkB family carbohydrate kinase FIV03_29500 PF04198 Putative sugar-binding domain FIV03_29505 PF00455 DeoR C terminal sensor domain FIV03_29505 PF08220 DeoR-like helix-turn-helix domain FIV03_29510 PF13407 Periplasmic binding protein domain FIV03_29515 PF02653 Branched-chain amino acid transport system / permease component FIV03_29520 PF00005 ABC transporter FIV03_29530 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_29530 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_29535 PF01266 FAD dependent oxidoreductase FIV03_29535 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FIV03_29540 PF01261 Xylose isomerase-like TIM barrel FIV03_29545 PF04198 Putative sugar-binding domain FIV03_29550 PF02779 Transketolase, pyrimidine binding domain FIV03_29550 PF00456 Transketolase, thiamine diphosphate binding domain FIV03_29550 PF02780 Transketolase, C-terminal domain FIV03_29555 PF00455 DeoR C terminal sensor domain FIV03_29555 PF08220 DeoR-like helix-turn-helix domain FIV03_29560 PF00121 Triosephosphate isomerase FIV03_29565 PF02502 Ribose/Galactose Isomerase FIV03_29570 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FIV03_29575 PF01116 Fructose-bisphosphate aldolase class-II FIV03_29580 PF03466 LysR substrate binding domain FIV03_29580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_29590 PF01810 LysE type translocator FIV03_29600 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29605 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29615 PF17912 MalK OB fold domain FIV03_29615 PF00005 ABC transporter FIV03_29620 PF06964 Alpha-L-arabinofuranosidase C-terminal domain FIV03_29630 PF03466 LysR substrate binding domain FIV03_29630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_29635 PF09084 NMT1/THI5 like FIV03_29640 PF00005 ABC transporter FIV03_29645 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29650 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_29650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_29655 PF02515 CoA-transferase family III FIV03_29660 PF00378 Enoyl-CoA hydratase/isomerase FIV03_29665 PF00037 4Fe-4S binding domain FIV03_29670 PF00701 Dihydrodipicolinate synthetase family FIV03_29675 PF00171 Aldehyde dehydrogenase family FIV03_29685 PF00561 alpha/beta hydrolase fold FIV03_29695 PF02798 Glutathione S-transferase, N-terminal domain FIV03_29695 PF00043 Glutathione S-transferase, C-terminal domain FIV03_29700 PF07237 Protein of unknown function (DUF1428) FIV03_29705 PF01638 HxlR-like helix-turn-helix FIV03_29710 PF01380 SIS domain FIV03_29710 PF01418 Helix-turn-helix domain, rpiR family FIV03_29715 PF13416 Bacterial extracellular solute-binding protein FIV03_29720 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29725 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_29760 PF08281 Sigma-70, region 4 FIV03_29760 PF04542 Sigma-70 region 2 FIV03_29765 PF03795 YCII-related domain FIV03_29780 PF00072 Response regulator receiver domain FIV03_29780 PF00196 Bacterial regulatory proteins, luxR family FIV03_29785 PF00487 Fatty acid desaturase FIV03_29790 PF13193 AMP-binding enzyme C-terminal domain FIV03_29790 PF00975 Thioesterase domain FIV03_29790 PF00550 Phosphopantetheine attachment site FIV03_29790 PF00668 Condensation domain FIV03_29790 PF00501 AMP-binding enzyme FIV03_29800 PF01032 FecCD transport family FIV03_29805 PF01032 FecCD transport family FIV03_29810 PF00005 ABC transporter FIV03_29815 PF00296 Luciferase-like monooxygenase FIV03_29820 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FIV03_29825 PF00561 alpha/beta hydrolase fold FIV03_29835 PF03861 ANTAR domain FIV03_29835 PF08376 Nitrate and nitrite sensing FIV03_29845 PF11862 Domain of unknown function (DUF3382) FIV03_29845 PF02653 Branched-chain amino acid transport system / permease component FIV03_29855 PF00005 ABC transporter FIV03_29855 PF12399 Branched-chain amino acid ATP-binding cassette transporter FIV03_29860 PF00005 ABC transporter FIV03_29865 PF00795 Carbon-nitrogen hydrolase FIV03_29870 PF08406 CbbQ/NirQ/NorQ C-terminal FIV03_29870 PF07728 AAA domain (dynein-related subfamily) FIV03_29875 PF00092 von Willebrand factor type A domain FIV03_29880 PF13614 AAA domain FIV03_29880 PF00376 MerR family regulatory protein FIV03_29885 PF02195 ParB-like nuclease domain FIV03_29885 PF07506 RepB plasmid partitioning protein FIV03_29890 PF11800 Replication protein C C-terminal region FIV03_29890 PF03428 Replication protein C N-terminal domain FIV03_29895 PF04349 Periplasmic glucan biosynthesis protein, MdoG FIV03_29915 PF00072 Response regulator receiver domain FIV03_29915 PF04397 LytTr DNA-binding domain FIV03_29920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_29920 PF07694 5TMR of 5TMR-LYT FIV03_29920 PF06580 Histidine kinase FIV03_29940 PF00690 Cation transporter/ATPase, N-terminus FIV03_29940 PF00689 Cation transporting ATPase, C-terminus FIV03_29965 PF00403 Heavy-metal-associated domain FIV03_29980 PF01322 Cytochrome C' FIV03_29985 PF00034 Cytochrome c FIV03_29990 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FIV03_29990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FIV03_30010 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_30010 PF00529 HlyD membrane-fusion protein of T1SS FIV03_30015 PF00873 AcrB/AcrD/AcrF family FIV03_30025 PF08450 SMP-30/Gluconolactonase/LRE-like region FIV03_30030 PF03459 TOBE domain FIV03_30030 PF17912 MalK OB fold domain FIV03_30030 PF00005 ABC transporter FIV03_30045 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30050 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_30060 PF13378 Enolase C-terminal domain-like FIV03_30070 PF05035 2-keto-3-deoxy-galactonokinase FIV03_30080 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_30080 PF13378 Enolase C-terminal domain-like FIV03_30085 PF00005 ABC transporter FIV03_30085 PF17912 MalK OB fold domain FIV03_30085 PF03459 TOBE domain FIV03_30090 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30095 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30105 PF00356 Bacterial regulatory proteins, lacI family FIV03_30110 PF00574 Clp protease FIV03_30125 PF00330 Aconitase family (aconitate hydratase) FIV03_30125 PF00694 Aconitase C-terminal domain FIV03_30130 PF01970 Tripartite tricarboxylate transporter TctA family FIV03_30140 PF03401 Tripartite tricarboxylate transporter family receptor FIV03_30145 PF07729 FCD domain FIV03_30145 PF00392 Bacterial regulatory proteins, gntR family FIV03_30160 PF17854 FtsK alpha domain FIV03_30160 PF09397 Ftsk gamma domain FIV03_30160 PF01580 FtsK/SpoIIIE family FIV03_30160 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FIV03_30170 PF07690 Major Facilitator Superfamily FIV03_30175 PF12680 SnoaL-like domain FIV03_30175 PF08281 Sigma-70, region 4 FIV03_30175 PF04542 Sigma-70 region 2 FIV03_30180 PF02627 Carboxymuconolactone decarboxylase family FIV03_30185 PF01557 Fumarylacetoacetate (FAA) hydrolase family FIV03_30190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_30190 PF13378 Enolase C-terminal domain-like FIV03_30210 PF05336 L-rhamnose mutarotase FIV03_30215 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FIV03_30215 PF13378 Enolase C-terminal domain-like FIV03_30220 PF08402 TOBE domain FIV03_30220 PF00005 ABC transporter FIV03_30225 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30230 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30245 PF04909 Amidohydrolase FIV03_30255 PF02515 CoA-transferase family III FIV03_30265 PF01047 MarR family FIV03_30275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FIV03_30275 PF00355 Rieske [2Fe-2S] domain FIV03_30280 PF00866 Ring hydroxylating beta subunit FIV03_30285 PF00668 Condensation domain FIV03_30285 PF00550 Phosphopantetheine attachment site FIV03_30285 PF00501 AMP-binding enzyme FIV03_30285 PF13193 AMP-binding enzyme C-terminal domain FIV03_30300 PF04199 Putative cyclase FIV03_30315 PF03480 Bacterial extracellular solute-binding protein, family 7 FIV03_30325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FIV03_30330 PF00067 Cytochrome P450 FIV03_30340 PF00072 Response regulator receiver domain FIV03_30340 PF00486 Transcriptional regulatory protein, C terminal FIV03_30345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_30345 PF08521 Two-component sensor kinase N-terminal FIV03_30345 PF00512 His Kinase A (phospho-acceptor) domain FIV03_30360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_30360 PF03466 LysR substrate binding domain FIV03_30365 PF02525 Flavodoxin-like fold FIV03_30370 PF00732 GMC oxidoreductase FIV03_30370 PF05199 GMC oxidoreductase FIV03_30380 PF01047 MarR family FIV03_30395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_30395 PF03466 LysR substrate binding domain FIV03_30400 PF00574 Clp protease FIV03_30405 PF00180 Isocitrate/isopropylmalate dehydrogenase FIV03_30405 PF03737 Aldolase/RraA FIV03_30415 PF12697 Alpha/beta hydrolase family FIV03_30450 PF00664 ABC transporter transmembrane region FIV03_30450 PF00005 ABC transporter FIV03_30455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FIV03_30455 PF00529 HlyD membrane-fusion protein of T1SS FIV03_30465 PF00465 Iron-containing alcohol dehydrogenase FIV03_30470 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30475 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_30485 PF00005 ABC transporter FIV03_30485 PF08402 TOBE domain FIV03_30490 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FIV03_30490 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FIV03_30495 PF01565 FAD binding domain FIV03_30495 PF02913 FAD linked oxidases, C-terminal domain FIV03_30500 PF00356 Bacterial regulatory proteins, lacI family FIV03_30505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FIV03_30505 PF00512 His Kinase A (phospho-acceptor) domain FIV03_30520 PF02954 Bacterial regulatory protein, Fis family FIV03_30520 PF00158 Sigma-54 interaction domain FIV03_30520 PF00072 Response regulator receiver domain FIV03_30525 PF07478 D-ala D-ala ligase C-terminus FIV03_30525 PF01820 D-ala D-ala ligase N-terminus FIV03_30545 PF00862 Sucrose synthase FIV03_30545 PF00534 Glycosyl transferases group 1 FIV03_30575 PF13807 G-rich domain on putative tyrosine kinase FIV03_30575 PF13614 AAA domain FIV03_30575 PF02706 Chain length determinant protein FIV03_30585 PF00534 Glycosyl transferases group 1 FIV03_30585 PF13439 Glycosyltransferase Family 4 FIV03_30590 PF00535 Glycosyl transferase family 2 FIV03_30595 PF01370 NAD dependent epimerase/dehydratase family FIV03_30600 PF08421 Putative zinc binding domain FIV03_30600 PF08484 C-methyltransferase C-terminal domain FIV03_30605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV03_30610 PF16363 GDP-mannose 4,6 dehydratase FIV03_30615 PF00483 Nucleotidyl transferase FIV03_30635 PF02719 Polysaccharide biosynthesis protein FIV03_30640 PF02397 Bacterial sugar transferase FIV03_30645 PF02911 Formyl transferase, C-terminal domain FIV03_30645 PF00551 Formyl transferase FIV03_30655 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FIV03_30670 PF06983 3-demethylubiquinone-9 3-methyltransferase FIV03_30695 PF01872 RibD C-terminal domain FIV03_30705 PF01381 Helix-turn-helix FIV03_30710 PF17042 Nucleotide-binding C-terminal domain FIV03_30710 PF07005 Sugar-binding N-terminal domain FIV03_30715 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FIV03_30715 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FIV03_30720 PF10727 Rossmann-like domain FIV03_30720 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term FIV03_30725 PF13407 Periplasmic binding protein domain FIV03_30730 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FIV03_30735 PF03524 Conjugal transfer protein FIV03_30740 PF04335 VirB8 protein FIV03_30745 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FIV03_30760 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FIV03_30765 PF05101 Type IV secretory pathway, VirB3-like protein FIV03_30770 PF04956 TrbC/VIRB2 family FIV03_30775 PF00437 Type II/IV secretion system protein FIV03_30800 PF05717 IS66 Orf2 like protein FIV03_30815 PF02374 Anion-transporting ATPase FIV03_30825 PF02311 AraC-like ligand binding domain FIV03_30825 PF12833 Helix-turn-helix domain FIV03_30830 PF02515 CoA-transferase family III FIV03_30835 PF00465 Iron-containing alcohol dehydrogenase FIV03_30840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FIV03_30840 PF02770 Acyl-CoA dehydrogenase, middle domain FIV03_30840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FIV03_30845 PF09339 IclR helix-turn-helix domain FIV03_30850 PF00171 Aldehyde dehydrogenase family FIV03_30855 PF00378 Enoyl-CoA hydratase/isomerase FIV03_30855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FIV03_30855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FIV03_30860 PF07859 alpha/beta hydrolase fold FIV03_30865 PF00743 Flavin-binding monooxygenase-like FIV03_30875 PF01012 Electron transfer flavoprotein domain FIV03_30880 PF00766 Electron transfer flavoprotein FAD-binding domain FIV03_30880 PF01012 Electron transfer flavoprotein domain FIV03_30885 PF02803 Thiolase, C-terminal domain FIV03_30885 PF00108 Thiolase, N-terminal domain FIV03_30895 PF03358 NADPH-dependent FMN reductase FIV03_30905 PF13407 Periplasmic binding protein domain FIV03_30910 PF00005 ABC transporter FIV03_30915 PF02653 Branched-chain amino acid transport system / permease component FIV03_30920 PF01418 Helix-turn-helix domain, rpiR family FIV03_30920 PF01380 SIS domain FIV03_30925 PF00294 pfkB family carbohydrate kinase FIV03_30950 PF01966 HD domain FIV03_30960 PF11490 DNA polymerase III polC-type N-terminus II FIV03_30960 PF00929 Exonuclease FIV03_30960 PF07733 Bacterial DNA polymerase III alpha NTPase domain FIV03_30960 PF02811 PHP domain FIV03_30960 PF14579 Helix-hairpin-helix motif FIV03_30960 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FIV03_30960 PF14480 DNA polymerase III polC-type N-terminus I FIV03_30985 PF01381 Helix-turn-helix FIV03_30990 PF00565 Staphylococcal nuclease homologue FIV03_30990 PF05901 Excalibur calcium-binding domain FIV03_30995 PF06871 TraH_2 FIV03_31000 PF00795 Carbon-nitrogen hydrolase FIV03_31005 PF10502 Signal peptidase, peptidase S26 FIV03_31010 PF01443 Viral (Superfamily 1) RNA helicase FIV03_31010 PF17841 BID domain of Bartonella effector protein (Bep) FIV03_31010 PF03389 MobA/MobL family FIV03_31025 PF06412 Conjugal transfer protein TraD FIV03_31030 PF02534 Type IV secretory system Conjugative DNA transfer FIV03_31045 PF18543 Intracellular delivery domain FIV03_31045 PF02661 Fic/DOC family FIV03_31065 PF03428 Replication protein C N-terminal domain FIV03_31065 PF11800 Replication protein C C-terminal region FIV03_31070 PF07506 RepB plasmid partitioning protein FIV03_31070 PF02195 ParB-like nuclease domain FIV03_31075 PF13614 AAA domain FIV03_31080 PF01964 Radical SAM ThiC family FIV03_31080 PF13667 ThiC-associated domain FIV03_31100 PF01548 Transposase FIV03_31105 PF05443 ROS/MUCR transcriptional regulator protein FIV03_31135 PF00437 Type II/IV secretion system protein FIV03_31140 PF04956 TrbC/VIRB2 family FIV03_31145 PF05101 Type IV secretory pathway, VirB3-like protein FIV03_31165 PF13462 Thioredoxin FIV03_31170 PF01551 Peptidase family M23 FIV03_31170 PF04225 Opacity-associated protein A LysM-like domain FIV03_31175 PF01569 PAP2 superfamily FIV03_31185 PF13005 zinc-finger binding domain of transposase IS66 FIV03_31185 PF13817 IS66 C-terminal element FIV03_31185 PF03050 Transposase IS66 family FIV03_31185 PF13007 Transposase C of IS166 homeodomain FIV03_31190 PF05717 IS66 Orf2 like protein FIV03_31195 PF01527 Transposase FIV03_31200 PF01548 Transposase FIV03_31200 PF02371 Transposase IS116/IS110/IS902 family FIV03_31210 PF01325 Iron dependent repressor, N-terminal DNA binding domain FIV03_31210 PF02742 Iron dependent repressor, metal binding and dimerisation domain FIV03_31215 PF03150 Di-haem cytochrome c peroxidase FIV03_31225 PF00005 ABC transporter FIV03_31230 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_31245 PF03734 L,D-transpeptidase catalytic domain FIV03_31255 PF00403 Heavy-metal-associated domain FIV03_31260 PF03734 L,D-transpeptidase catalytic domain FIV03_31265 PF02796 Helix-turn-helix domain of resolvase FIV03_31265 PF00239 Resolvase, N terminal domain FIV03_31270 PF01526 Tn3 transposase DDE domain FIV03_31270 PF13700 Domain of unknown function (DUF4158) FIV03_31315 PF02586 SOS response associated peptidase (SRAP) FIV03_31325 PF00672 HAMP domain FIV03_31325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FIV03_31335 PF03743 Bacterial conjugation TrbI-like protein FIV03_31340 PF10502 Signal peptidase, peptidase S26 FIV03_31345 PF17841 BID domain of Bartonella effector protein (Bep) FIV03_31345 PF03389 MobA/MobL family FIV03_31345 PF01443 Viral (Superfamily 1) RNA helicase FIV03_31350 PF07820 TraC-like protein FIV03_31355 PF02534 Type IV secretory system Conjugative DNA transfer FIV03_31370 PF05284 Protein of unknown function (DUF736) FIV03_31415 PF17762 HTH domain found in ParB protein FIV03_31415 PF02195 ParB-like nuclease domain FIV03_31505 PF07756 Protein of unknown function (DUF1612) FIV03_31505 PF11972 HTH DNA binding domain FIV03_31510 PF00239 Resolvase, N terminal domain FIV03_31515 PF11800 Replication protein C C-terminal region FIV03_31515 PF03428 Replication protein C N-terminal domain FIV03_31520 PF07506 RepB plasmid partitioning protein FIV03_31520 PF02195 ParB-like nuclease domain FIV03_31525 PF13614 AAA domain FIV03_31535 PF05443 ROS/MUCR transcriptional regulator protein FIV03_31545 PF00437 Type II/IV secretion system protein FIV03_31550 PF04956 TrbC/VIRB2 family FIV03_31555 PF05101 Type IV secretory pathway, VirB3-like protein FIV03_31560 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FIV03_31575 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FIV03_31580 PF04335 VirB8 protein FIV03_31585 PF03524 Conjugal transfer protein FIV03_31595 PF03743 Bacterial conjugation TrbI-like protein FIV03_31600 PF13411 MerR HTH family regulatory protein FIV03_31620 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FIV03_31620 PF00403 Heavy-metal-associated domain FIV03_31620 PF07992 Pyridine nucleotide-disulphide oxidoreductase FIV03_31625 PF01740 STAS domain FIV03_31625 PF00916 Sulfate permease family FIV03_31635 PF02796 Helix-turn-helix domain of resolvase FIV03_31635 PF00239 Resolvase, N terminal domain FIV03_31655 PF04225 Opacity-associated protein A LysM-like domain FIV03_31655 PF01551 Peptidase family M23 FIV03_31660 PF01569 PAP2 superfamily FIV03_31665 PF02742 Iron dependent repressor, metal binding and dimerisation domain FIV03_31665 PF01325 Iron dependent repressor, N-terminal DNA binding domain FIV03_31670 PF03150 Di-haem cytochrome c peroxidase FIV03_31680 PF00005 ABC transporter FIV03_31685 PF00528 Binding-protein-dependent transport system inner membrane component FIV03_31700 PF03734 L,D-transpeptidase catalytic domain FIV03_31710 PF00403 Heavy-metal-associated domain FIV03_31715 PF03734 L,D-transpeptidase catalytic domain FIV03_31720 PF17969 L,D-transpeptidase C-terminal domain FIV03_31720 PF01476 LysM domain FIV03_31720 PF03734 L,D-transpeptidase catalytic domain FIV03_31740 PF01545 Cation efflux family FIV03_31750 PF13411 MerR HTH family regulatory protein FIV03_31760 PF02600 Disulfide bond formation protein DsbB FIV03_31765 PF13462 Thioredoxin FIV03_31775 PF02630 SCO1/SenC FIV03_31785 PF01252 Signal peptidase (SPase) II FIV03_31790 PF03050 Transposase IS66 family FIV03_31790 PF13817 IS66 C-terminal element FIV03_31790 PF13007 Transposase C of IS166 homeodomain FIV03_31790 PF13005 zinc-finger binding domain of transposase IS66 FIV03_31800 PF06871 TraH_2 FIV03_31805 PF00795 Carbon-nitrogen hydrolase FIV03_31820 PF05845 Bacterial phosphonate metabolism protein (PhnH) FIV03_31855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FIV03_31855 PF03466 LysR substrate binding domain FIV03_31860 PF00239 Resolvase, N terminal domain FIV03_31860 PF02796 Helix-turn-helix domain of resolvase FIV03_31880 PF13614 AAA domain FIV03_31915 PF02534 Type IV secretory system Conjugative DNA transfer FIV03_31925 PF01443 Viral (Superfamily 1) RNA helicase FIV03_31925 PF03389 MobA/MobL family FIV03_31925 PF17841 BID domain of Bartonella effector protein (Bep) FIV03_31935 PF00005 ABC transporter FIV03_31940 PF00005 ABC transporter FIV03_31945 PF06007 Phosphonate metabolism protein PhnJ FIV03_31950 PF05861 Bacterial phosphonate metabolism protein (PhnI)