locus-tag class description ASU28_00005 PF11638 DnaA N-terminal domain ASU28_00005 PF08299 Bacterial dnaA protein helix-turn-helix ASU28_00005 PF00308 Bacterial dnaA protein ASU28_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ASU28_00010 PF02767 DNA polymerase III beta subunit, central domain ASU28_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ASU28_00020 PF02463 RecF/RecN/SMC N terminal domain ASU28_00025 PF00986 DNA gyrase B subunit, carboxyl terminus ASU28_00025 PF01751 Toprim domain ASU28_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_00025 PF00204 DNA gyrase B ASU28_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller ASU28_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A ASU28_00035 PF01250 Ribosomal protein S6 ASU28_00040 PF00436 Single-strand binding protein family ASU28_00045 PF01084 Ribosomal protein S18 ASU28_00050 PF01368 DHH family ASU28_00050 PF02272 DHHA1 domain ASU28_00055 PF01281 Ribosomal protein L9, N-terminal domain ASU28_00055 PF03948 Ribosomal protein L9, C-terminal domain ASU28_00060 PF00772 DnaB-like helicase N terminal domain ASU28_00060 PF03796 DnaB-like helicase C terminal domain ASU28_00070 PF00696 Amino acid kinase family ASU28_00075 PF00171 Aldehyde dehydrogenase family ASU28_00080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_00085 PF02806 Alpha amylase, C-terminal all-beta domain ASU28_00085 PF00128 Alpha amylase, catalytic domain ASU28_00085 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASU28_00090 PF00483 Nucleotidyl transferase ASU28_00095 PF00483 Nucleotidyl transferase ASU28_00100 PF08323 Starch synthase catalytic domain ASU28_00100 PF00534 Glycosyl transferases group 1 ASU28_00105 PF00343 Carbohydrate phosphorylase ASU28_00110 PF00128 Alpha amylase, catalytic domain ASU28_00110 PF02903 Alpha amylase, N-terminal ig-like domain ASU28_00115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASU28_00120 PF13419 Haloacid dehalogenase-like hydrolase ASU28_00125 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASU28_00125 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASU28_00125 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASU28_00135 PF00313 'Cold-shock' DNA-binding domain ASU28_00210 PF04860 Phage portal protein ASU28_00235 PF00313 'Cold-shock' DNA-binding domain ASU28_00250 PF00072 Response regulator receiver domain ASU28_00250 PF00486 Transcriptional regulatory protein, C terminal ASU28_00255 PF00512 His Kinase A (phospho-acceptor) domain ASU28_00255 PF14827 Double sensory domain of two-component sensor kinase ASU28_00255 PF13426 PAS domain ASU28_00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_00255 PF00672 HAMP domain ASU28_00265 PF09648 YycH protein ASU28_00270 PF00753 Metallo-beta-lactamase superfamily ASU28_00275 PF13180 PDZ domain ASU28_00280 PF02590 Predicted SPOUT methyltransferase ASU28_00300 PF03060 Nitronate monooxygenase ASU28_00320 PF00665 Integrase core domain ASU28_00320 PF13276 HTH-like domain ASU28_00320 PF13333 Integrase core domain ASU28_00350 PF00535 Glycosyl transferase family 2 ASU28_00350 PF01501 Glycosyl transferase family 8 ASU28_00365 PF13439 Glycosyltransferase Family 4 ASU28_00365 PF00534 Glycosyl transferases group 1 ASU28_00370 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ASU28_00375 PF01467 Cytidylyltransferase-like ASU28_00385 PF00665 Integrase core domain ASU28_00385 PF13333 Integrase core domain ASU28_00385 PF13276 HTH-like domain ASU28_00395 PF03033 Glycosyltransferase family 28 N-terminal domain ASU28_00395 PF04101 Glycosyltransferase family 28 C-terminal domain ASU28_00410 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASU28_00420 PF00230 Major intrinsic protein ASU28_00430 PF02350 UDP-N-acetylglucosamine 2-epimerase ASU28_00435 PF00144 Beta-lactamase ASU28_00440 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ASU28_00440 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ASU28_00460 PF02378 Phosphotransferase system, EIIC ASU28_00485 PF00271 Helicase conserved C-terminal domain ASU28_00485 PF00270 DEAD/DEAH box helicase ASU28_00490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_00495 PF00313 'Cold-shock' DNA-binding domain ASU28_00510 PF01418 Helix-turn-helix domain, rpiR family ASU28_00510 PF01380 SIS domain ASU28_00520 PF02378 Phosphotransferase system, EIIC ASU28_00530 PF03551 Transcriptional regulator PadR-like family ASU28_00545 PF00753 Metallo-beta-lactamase superfamily ASU28_00560 PF01938 TRAM domain ASU28_00560 PF05958 tRNA (Uracil-5-)-methyltransferase ASU28_00565 PF00781 Diacylglycerol kinase catalytic domain ASU28_00570 PF02934 GatB/GatE catalytic domain ASU28_00570 PF02637 GatB domain ASU28_00575 PF01425 Amidase ASU28_00580 PF02686 Glu-tRNAGln amidotransferase C subunit ASU28_00585 PF07537 CamS sex pheromone cAM373 precursor ASU28_00590 PF03120 NAD-dependent DNA ligase OB-fold domain ASU28_00590 PF01653 NAD-dependent DNA ligase adenylation domain ASU28_00590 PF12826 Helix-hairpin-helix motif ASU28_00590 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASU28_00590 PF00533 BRCA1 C Terminus (BRCT) domain ASU28_00595 PF13361 UvrD-like helicase C-terminal domain ASU28_00595 PF00580 UvrD/REP helicase N-terminal domain ASU28_00600 PF02222 ATP-grasp domain ASU28_00600 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ASU28_00605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ASU28_00615 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ASU28_00615 PF13457 GW (Gly-Tryp) dipeptide domain ASU28_00620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASU28_00620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_00630 PF00348 Polyprenyl synthetase ASU28_00645 PF00664 ABC transporter transmembrane region ASU28_00645 PF00005 ABC transporter ASU28_00650 PF00005 ABC transporter ASU28_00650 PF00664 ABC transporter transmembrane region ASU28_00655 PF02322 Cytochrome bd terminal oxidase subunit II ASU28_00660 PF01654 Cytochrome bd terminal oxidase subunit I ASU28_00670 PF12822 ECF transporter, substrate-specific component ASU28_00675 PF13520 Amino acid permease ASU28_00685 PF00390 Malic enzyme, N-terminal domain ASU28_00685 PF03949 Malic enzyme, NAD binding domain ASU28_00690 PF03466 LysR substrate binding domain ASU28_00690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_00695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_00695 PF03466 LysR substrate binding domain ASU28_00700 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase ASU28_00700 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ASU28_00705 PF00890 FAD binding domain ASU28_00705 PF14537 Cytochrome c3 ASU28_00710 PF10415 Fumarase C C-terminus ASU28_00710 PF00206 Lyase ASU28_00715 PF04223 Citrate lyase, alpha subunit (CitF) ASU28_00720 PF03328 HpcH/HpaI aldolase/citrate lyase family ASU28_00725 PF06857 Malonate decarboxylase delta subunit (MdcD) ASU28_00730 PF08218 Citrate lyase ligase C-terminal domain ASU28_00735 PF03949 Malic enzyme, NAD binding domain ASU28_00735 PF00390 Malic enzyme, N-terminal domain ASU28_00745 PF00939 Sodium:sulfate symporter transmembrane region ASU28_00750 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_00750 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_00765 PF01297 Zinc-uptake complex component A periplasmic ASU28_00770 PF00950 ABC 3 transport family ASU28_00775 PF00005 ABC transporter ASU28_00780 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase ASU28_00785 PF12833 Helix-turn-helix domain ASU28_00785 PF02311 AraC-like ligand binding domain ASU28_00790 PF05681 Fumarate hydratase (Fumerase) ASU28_00795 PF05683 Fumarase C-terminus ASU28_00800 PF01883 Iron-sulfur cluster assembly protein ASU28_00805 PF00939 Sodium:sulfate symporter transmembrane region ASU28_00810 PF01761 3-dehydroquinate synthase ASU28_00815 PF00793 DAHP synthetase I family ASU28_00815 PF18152 DAHP synthase ferredoxin-like domain ASU28_00820 PF08501 Shikimate dehydrogenase substrate binding domain ASU28_00820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ASU28_00825 PF00456 Transketolase, thiamine diphosphate binding domain ASU28_00825 PF02780 Transketolase, C-terminal domain ASU28_00825 PF02779 Transketolase, pyrimidine binding domain ASU28_00840 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_00845 PF00380 Ribosomal protein S9/S16 ASU28_00850 PF00572 Ribosomal protein L13 ASU28_00855 PF01416 tRNA pseudouridine synthase ASU28_00860 PF02361 Cobalt transport protein ASU28_00865 PF00005 ABC transporter ASU28_00870 PF00005 ABC transporter ASU28_00875 PF02424 ApbE family ASU28_00880 PF04205 FMN-binding domain ASU28_00900 PF00348 Polyprenyl synthetase ASU28_00905 PF01196 Ribosomal protein L17 ASU28_00910 PF01000 RNA polymerase Rpb3/RpoA insert domain ASU28_00910 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ASU28_00910 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ASU28_00915 PF00411 Ribosomal protein S11 ASU28_00920 PF00416 Ribosomal protein S13/S18 ASU28_00925 PF01176 Translation initiation factor 1A / IF-1 ASU28_00930 PF05191 Adenylate kinase, active site lid ASU28_00935 PF00344 SecY translocase ASU28_00940 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ASU28_00945 PF00327 Ribosomal protein L30p/L7e ASU28_00950 PF00333 Ribosomal protein S5, N-terminal domain ASU28_00950 PF03719 Ribosomal protein S5, C-terminal domain ASU28_00955 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ASU28_00960 PF00347 Ribosomal protein L6 ASU28_00965 PF00410 Ribosomal protein S8 ASU28_00970 PF00281 Ribosomal protein L5 ASU28_00970 PF00673 ribosomal L5P family C-terminus ASU28_00975 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ASU28_00975 PF00467 KOW motif ASU28_00980 PF00238 Ribosomal protein L14p/L23e ASU28_00985 PF00366 Ribosomal protein S17 ASU28_00990 PF00831 Ribosomal L29 protein ASU28_00995 PF00252 Ribosomal protein L16p/L10e ASU28_01000 PF00189 Ribosomal protein S3, C-terminal domain ASU28_01000 PF07650 KH domain ASU28_01005 PF00237 Ribosomal protein L22p/L17e ASU28_01010 PF00203 Ribosomal protein S19 ASU28_01015 PF00181 Ribosomal Proteins L2, RNA binding domain ASU28_01015 PF03947 Ribosomal Proteins L2, C-terminal domain ASU28_01020 PF00276 Ribosomal protein L23 ASU28_01025 PF00573 Ribosomal protein L4/L1 family ASU28_01030 PF00297 Ribosomal protein L3 ASU28_01035 PF00338 Ribosomal protein S10p/S20e ASU28_01045 PF00009 Elongation factor Tu GTP binding domain ASU28_01045 PF14492 Elongation Factor G, domain II ASU28_01045 PF00679 Elongation factor G C-terminus ASU28_01045 PF03764 Elongation factor G, domain IV ASU28_01045 PF03144 Elongation factor Tu domain 2 ASU28_01050 PF00177 Ribosomal protein S7p/S5e ASU28_01055 PF00164 Ribosomal protein S12/S23 ASU28_01060 PF06750 Bacterial Peptidase A24 N-terminal domain ASU28_01060 PF01478 Type IV leader peptidase family ASU28_01065 PF05000 RNA polymerase Rpb1, domain 4 ASU28_01065 PF04998 RNA polymerase Rpb1, domain 5 ASU28_01065 PF00623 RNA polymerase Rpb1, domain 2 ASU28_01065 PF04983 RNA polymerase Rpb1, domain 3 ASU28_01065 PF04997 RNA polymerase Rpb1, domain 1 ASU28_01070 PF04560 RNA polymerase Rpb2, domain 7 ASU28_01070 PF04563 RNA polymerase beta subunit ASU28_01070 PF04565 RNA polymerase Rpb2, domain 3 ASU28_01070 PF04561 RNA polymerase Rpb2, domain 2 ASU28_01070 PF00562 RNA polymerase Rpb2, domain 6 ASU28_01070 PF10385 RNA polymerase beta subunit external 1 domain ASU28_01075 PF08360 QacR-like protein, C-terminal region ASU28_01075 PF00440 Bacterial regulatory proteins, tetR family ASU28_01080 PF07724 AAA domain (Cdc48 subfamily) ASU28_01080 PF17871 AAA lid domain ASU28_01080 PF02861 Clp amino terminal domain, pathogenicity island component ASU28_01080 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_01080 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_01085 PF05848 CtsR N-terminal HTH domain ASU28_01085 PF17727 CtsR C-terminal dimerization domain ASU28_01125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASU28_01125 PF02403 Seryl-tRNA synthetase N-terminal domain ASU28_01130 PF01712 Deoxynucleoside kinase ASU28_01145 PF00324 Amino acid permease ASU28_01150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_01150 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_01150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_01155 PF02082 Transcriptional regulator ASU28_01175 PF03816 Cell envelope-related transcriptional attenuator domain ASU28_01190 PF00313 'Cold-shock' DNA-binding domain ASU28_01210 PF07690 Major Facilitator Superfamily ASU28_01245 PF13537 Glutamine amidotransferase domain ASU28_01245 PF00733 Asparagine synthase ASU28_01250 PF00696 Amino acid kinase family ASU28_01250 PF13840 ACT domain ASU28_01255 PF08245 Mur ligase middle domain ASU28_01255 PF02875 Mur ligase family, glutamate ligase domain ASU28_01255 PF01225 Mur ligase family, catalytic domain ASU28_01265 PF07859 alpha/beta hydrolase fold ASU28_01275 PF00106 short chain dehydrogenase ASU28_01275 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_01305 PF01022 Bacterial regulatory protein, arsR family ASU28_01310 PF00849 RNA pseudouridylate synthase ASU28_01315 PF00271 Helicase conserved C-terminal domain ASU28_01315 PF16124 RecQ zinc-binding ASU28_01315 PF09382 RQC domain ASU28_01315 PF00270 DEAD/DEAH box helicase ASU28_01315 PF00570 HRDC domain ASU28_01335 PF03577 Peptidase family C69 ASU28_01340 PF03590 Aspartate-ammonia ligase ASU28_01345 PF01336 OB-fold nucleic acid binding domain ASU28_01345 PF00152 tRNA synthetases class II (D, K and N) ASU28_01350 PF02525 Flavodoxin-like fold ASU28_01360 PF14537 Cytochrome c3 ASU28_01360 PF00890 FAD binding domain ASU28_01365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_01365 PF03466 LysR substrate binding domain ASU28_01405 PF09827 CRISPR associated protein Cas2 ASU28_01410 PF01867 CRISPR associated protein Cas1 ASU28_01415 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 ASU28_01415 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 ASU28_01415 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 ASU28_01415 PF13395 HNH endonuclease ASU28_01420 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 ASU28_01420 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 ASU28_01420 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 ASU28_01420 PF13395 HNH endonuclease ASU28_01425 PF00665 Integrase core domain ASU28_01425 PF13936 Helix-turn-helix domain ASU28_01435 PF03352 Methyladenine glycosylase ASU28_01440 PF03176 MMPL family ASU28_01460 PF01565 FAD binding domain ASU28_01460 PF02913 FAD linked oxidases, C-terminal domain ASU28_01465 PF03816 Cell envelope-related transcriptional attenuator domain ASU28_01480 PF02378 Phosphotransferase system, EIIC ASU28_01485 PF01418 Helix-turn-helix domain, rpiR family ASU28_01485 PF01380 SIS domain ASU28_01495 PF00486 Transcriptional regulatory protein, C terminal ASU28_01495 PF00072 Response regulator receiver domain ASU28_01500 PF00512 His Kinase A (phospho-acceptor) domain ASU28_01500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_01500 PF18719 ArlS sensor domain ASU28_01520 PF01566 Natural resistance-associated macrophage protein ASU28_01525 PF00440 Bacterial regulatory proteins, tetR family ASU28_01530 PF02082 Transcriptional regulator ASU28_01540 PF02441 Flavoprotein ASU28_01550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_01550 PF02378 Phosphotransferase system, EIIC ASU28_01550 PF00367 phosphotransferase system, EIIB ASU28_01555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_01555 PF00367 phosphotransferase system, EIIB ASU28_01555 PF02378 Phosphotransferase system, EIIC ASU28_01560 PF00128 Alpha amylase, catalytic domain ASU28_01560 PF16657 Maltogenic Amylase, C-terminal domain ASU28_01565 PF00392 Bacterial regulatory proteins, gntR family ASU28_01565 PF07702 UTRA domain ASU28_01585 PF00557 Metallopeptidase family M24 ASU28_01590 PF00291 Pyridoxal-phosphate dependent enzyme ASU28_01595 PF01053 Cys/Met metabolism PLP-dependent enzyme ASU28_01600 PF00132 Bacterial transferase hexapeptide (six repeats) ASU28_01605 PF03358 NADPH-dependent FMN reductase ASU28_01615 PF00334 Nucleoside diphosphate kinase ASU28_01635 PF00085 Thioredoxin ASU28_01645 PF01232 Mannitol dehydrogenase Rossmann domain ASU28_01645 PF08125 Mannitol dehydrogenase C-terminal domain ASU28_01650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASU28_01660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_01660 PF02378 Phosphotransferase system, EIIC ASU28_01665 PF03577 Peptidase family C69 ASU28_01670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ASU28_01680 PF03449 Transcription elongation factor, N-terminal ASU28_01680 PF01272 Transcription elongation factor, GreA/GreB, C-term ASU28_01685 PF00248 Aldo/keto reductase family ASU28_01690 PF00255 Glutathione peroxidase ASU28_01700 PF00005 ABC transporter ASU28_01710 PF00005 ABC transporter ASU28_01710 PF12848 ABC transporter ASU28_01715 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASU28_01720 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASU28_01730 PF00871 Acetokinase family ASU28_01735 PF05670 NFACT protein RNA binding domain ASU28_01750 PF00248 Aldo/keto reductase family ASU28_01755 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_01760 PF00266 Aminotransferase class-V ASU28_01765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASU28_01765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASU28_01765 PF01842 ACT domain ASU28_01775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_01780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_01790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_01790 PF03466 LysR substrate binding domain ASU28_01805 PF01061 ABC-2 type transporter ASU28_01810 PF00005 ABC transporter ASU28_01825 PF07690 Major Facilitator Superfamily ASU28_01830 PF00909 Ammonium Transporter Family ASU28_01835 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_01835 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_01850 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASU28_01855 PF07732 Multicopper oxidase ASU28_01855 PF07731 Multicopper oxidase ASU28_01860 PF06993 Protein of unknown function (DUF1304) ASU28_01865 PF01161 Phosphatidylethanolamine-binding protein ASU28_01890 PF01156 Inosine-uridine preferring nucleoside hydrolase ASU28_01895 PF00106 short chain dehydrogenase ASU28_01905 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_01910 PF00005 ABC transporter ASU28_01915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_01915 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_01920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASU28_01920 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASU28_01925 PF01266 FAD dependent oxidoreductase ASU28_01925 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ASU28_01930 PF00230 Major intrinsic protein ASU28_01935 PF00132 Bacterial transferase hexapeptide (six repeats) ASU28_01935 PF12464 Maltose acetyltransferase ASU28_01950 PF12833 Helix-turn-helix domain ASU28_01950 PF02311 AraC-like ligand binding domain ASU28_01960 PF05525 Branched-chain amino acid transport protein ASU28_01965 PF00999 Sodium/hydrogen exchanger family ASU28_02025 PF04397 LytTr DNA-binding domain ASU28_02025 PF00072 Response regulator receiver domain ASU28_02030 PF00072 Response regulator receiver domain ASU28_02030 PF04397 LytTr DNA-binding domain ASU28_02050 PF00664 ABC transporter transmembrane region ASU28_02050 PF00005 ABC transporter ASU28_02050 PF03412 Peptidase C39 family ASU28_02085 PF13538 UvrD-like helicase C-terminal domain ASU28_02090 PF00795 Carbon-nitrogen hydrolase ASU28_02095 PF00579 tRNA synthetases class I (W and Y) ASU28_02100 PF00392 Bacterial regulatory proteins, gntR family ASU28_02100 PF07702 UTRA domain ASU28_02105 PF02378 Phosphotransferase system, EIIC ASU28_02130 PF01207 Dihydrouridine synthase (Dus) ASU28_02135 PF02541 Ppx/GppA phosphatase family ASU28_02140 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ASU28_02150 PF02146 Sir2 family ASU28_02155 PF01904 Protein of unknown function DUF72 ASU28_02160 PF01588 Putative tRNA binding domain ASU28_02160 PF08264 Anticodon-binding domain of tRNA ASU28_02160 PF09334 tRNA synthetases class I (M) ASU28_02165 PF07690 Major Facilitator Superfamily ASU28_02170 PF01026 TatD related DNase ASU28_02175 PF13331 Domain of unknown function (DUF4093) ASU28_02180 PF00398 Ribosomal RNA adenine dimethylase ASU28_02185 PF06257 Biofilm formation stimulator VEG ASU28_02190 PF08544 GHMP kinases C terminal ASU28_02190 PF00288 GHMP kinases N terminal domain ASU28_02200 PF00005 ABC transporter ASU28_02205 PF00950 ABC 3 transport family ASU28_02210 PF09182 Bacterial purine repressor, N-terminal ASU28_02210 PF00156 Phosphoribosyl transferase domain ASU28_02215 PF00132 Bacterial transferase hexapeptide (six repeats) ASU28_02215 PF00483 Nucleotidyl transferase ASU28_02225 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASU28_02225 PF14572 Phosphoribosyl synthetase-associated domain ASU28_02245 PF01966 HD domain ASU28_02250 PF03099 Biotin/lipoate A/B protein ligase family ASU28_02260 PF05066 HB1, ASXL, restriction endonuclease HTH domain ASU28_02265 PF06418 CTP synthase N-terminus ASU28_02265 PF00117 Glutamine amidotransferase class-I ASU28_02270 PF04198 Putative sugar-binding domain ASU28_02275 PF01791 DeoC/LacD family aldolase ASU28_02290 PF00294 pfkB family carbohydrate kinase ASU28_02295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASU28_02295 PF02403 Seryl-tRNA synthetase N-terminal domain ASU28_02310 PF03315 Serine dehydratase beta chain ASU28_02310 PF01842 ACT domain ASU28_02315 PF03313 Serine dehydratase alpha chain ASU28_02330 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASU28_02335 PF07498 Rho termination factor, N-terminal domain ASU28_02335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASU28_02335 PF07497 Rho termination factor, RNA-binding domain ASU28_02340 PF01197 Ribosomal protein L31 ASU28_02350 PF04203 Sortase domain ASU28_02355 PF04011 LemA family ASU28_02360 PF01435 Peptidase family M48 ASU28_02370 PF02875 Mur ligase family, glutamate ligase domain ASU28_02370 PF01225 Mur ligase family, catalytic domain ASU28_02370 PF08245 Mur ligase middle domain ASU28_02375 PF00270 DEAD/DEAH box helicase ASU28_02375 PF00271 Helicase conserved C-terminal domain ASU28_02380 PF01648 4'-phosphopantetheinyl transferase superfamily ASU28_02385 PF01168 Alanine racemase, N-terminal domain ASU28_02385 PF00842 Alanine racemase, C-terminal domain ASU28_02390 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ASU28_02395 PF02705 K+ potassium transporter ASU28_02410 PF00005 ABC transporter ASU28_02415 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASU28_02415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_02420 PF00117 Glutamine amidotransferase class-I ASU28_02420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASU28_02425 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASU28_02425 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASU28_02430 PF01960 ArgJ family ASU28_02435 PF00696 Amino acid kinase family ASU28_02440 PF00202 Aminotransferase class-III ASU28_02445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASU28_02445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASU28_02465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_02465 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_02470 PF01195 Peptidyl-tRNA hydrolase ASU28_02475 PF17757 UvrB interaction domain ASU28_02475 PF03461 TRCF domain ASU28_02475 PF00271 Helicase conserved C-terminal domain ASU28_02475 PF00270 DEAD/DEAH box helicase ASU28_02475 PF02559 CarD-like/TRCF domain ASU28_02480 PF14667 Polysaccharide biosynthesis C-terminal domain ASU28_02480 PF01943 Polysaccharide biosynthesis protein ASU28_02485 PF01479 S4 domain ASU28_02495 PF00575 S1 RNA binding domain ASU28_02500 PF11734 TilS substrate C-terminal domain ASU28_02500 PF01171 PP-loop family ASU28_02505 PF11734 TilS substrate C-terminal domain ASU28_02505 PF00156 Phosphoribosyl transferase domain ASU28_02505 PF01171 PP-loop family ASU28_02510 PF01434 Peptidase family M41 ASU28_02510 PF17862 AAA+ lid domain ASU28_02510 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_02510 PF06480 FtsH Extracellular ASU28_02515 PF01430 Hsp33 protein ASU28_02520 PF01207 Dihydrouridine synthase (Dus) ASU28_02525 PF00152 tRNA synthetases class II (D, K and N) ASU28_02525 PF01336 OB-fold nucleic acid binding domain ASU28_02530 PF00403 Heavy-metal-associated domain ASU28_02560 PF07690 Major Facilitator Superfamily ASU28_02565 PF00664 ABC transporter transmembrane region ASU28_02565 PF00005 ABC transporter ASU28_02570 PF00005 ABC transporter ASU28_02570 PF00664 ABC transporter transmembrane region ASU28_02575 PF00248 Aldo/keto reductase family ASU28_02585 PF00155 Aminotransferase class I and II ASU28_02620 PF13419 Haloacid dehalogenase-like hydrolase ASU28_02625 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_02625 PF12464 Maltose acetyltransferase ASU28_02630 PF00582 Universal stress protein family ASU28_02650 PF00583 Acetyltransferase (GNAT) family ASU28_02660 PF10502 Signal peptidase, peptidase S26 ASU28_02665 PF12464 Maltose acetyltransferase ASU28_02665 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_02670 PF00730 HhH-GPD superfamily base excision DNA repair protein ASU28_02670 PF00633 Helix-hairpin-helix motif ASU28_02675 PF00005 ABC transporter ASU28_02685 PF07687 Peptidase dimerisation domain ASU28_02685 PF01546 Peptidase family M20/M25/M40 ASU28_02690 PF13411 MerR HTH family regulatory protein ASU28_02705 PF00106 short chain dehydrogenase ASU28_02715 PF00005 ABC transporter ASU28_02715 PF13732 Domain of unknown function (DUF4162) ASU28_02720 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASU28_02720 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASU28_02725 PF02805 Metal binding domain of Ada ASU28_02725 PF12833 Helix-turn-helix domain ASU28_02745 PF13439 Glycosyltransferase Family 4 ASU28_02745 PF00534 Glycosyl transferases group 1 ASU28_02750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_02750 PF03466 LysR substrate binding domain ASU28_02755 PF03601 Conserved hypothetical protein 698 ASU28_02760 PF13302 Acetyltransferase (GNAT) domain ASU28_02770 PF07690 Major Facilitator Superfamily ASU28_02780 PF07690 Major Facilitator Superfamily ASU28_02785 PF10415 Fumarase C C-terminus ASU28_02785 PF00206 Lyase ASU28_02800 PF00999 Sodium/hydrogen exchanger family ASU28_02810 PF01156 Inosine-uridine preferring nucleoside hydrolase ASU28_02820 PF13411 MerR HTH family regulatory protein ASU28_02820 PF07739 TipAS antibiotic-recognition domain ASU28_02825 PF00005 ABC transporter ASU28_02830 PF02687 FtsX-like permease family ASU28_02840 PF00375 Sodium:dicarboxylate symporter family ASU28_02845 PF06445 GyrI-like small molecule binding domain ASU28_02845 PF13411 MerR HTH family regulatory protein ASU28_02850 PF04474 Protein of unknown function (DUF554) ASU28_02865 PF13529 Peptidase_C39 like family ASU28_02880 PF01479 S4 domain ASU28_02880 PF00579 tRNA synthetases class I (W and Y) ASU28_02885 PF07155 ECF-type riboflavin transporter, S component ASU28_02920 PF07690 Major Facilitator Superfamily ASU28_02925 PF01297 Zinc-uptake complex component A periplasmic ASU28_02940 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ASU28_02945 PF01227 GTP cyclohydrolase I ASU28_02950 PF02875 Mur ligase family, glutamate ligase domain ASU28_02950 PF08245 Mur ligase middle domain ASU28_02955 PF01725 Ham1 family ASU28_02960 PF00809 Pterin binding enzyme ASU28_02965 PF00958 GMP synthase C terminal domain ASU28_02965 PF00117 Glutamine amidotransferase class-I ASU28_02965 PF03352 Methyladenine glycosylase ASU28_02965 PF13302 Acetyltransferase (GNAT) domain ASU28_02965 PF13673 Acetyltransferase (GNAT) domain ASU28_02970 PF03466 LysR substrate binding domain ASU28_02970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_02975 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ASU28_02975 PF01276 Orn/Lys/Arg decarboxylase, major domain ASU28_02985 PF00892 EamA-like transporter family ASU28_02990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASU28_02990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASU28_02995 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASU28_03005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASU28_03010 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_03015 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_03020 PF00665 Integrase core domain ASU28_03020 PF13333 Integrase core domain ASU28_03020 PF13276 HTH-like domain ASU28_03030 PF00106 short chain dehydrogenase ASU28_03045 PF03167 Uracil DNA glycosylase superfamily ASU28_03065 PF03358 NADPH-dependent FMN reductase ASU28_03065 PF00890 FAD binding domain ASU28_03065 PF04205 FMN-binding domain ASU28_03075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_03075 PF03466 LysR substrate binding domain ASU28_03085 PF01451 Low molecular weight phosphotyrosine protein phosphatase ASU28_03100 PF00881 Nitroreductase family ASU28_03105 PF07905 Purine catabolism regulatory protein-like family ASU28_03105 PF13556 PucR C-terminal helix-turn-helix domain ASU28_03105 PF17853 GGDEF-like domain ASU28_03110 PF13419 Haloacid dehalogenase-like hydrolase ASU28_03120 PF13350 Tyrosine phosphatase family ASU28_03125 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ASU28_03125 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ASU28_03145 PF02525 Flavodoxin-like fold ASU28_03150 PF00009 Elongation factor Tu GTP binding domain ASU28_03150 PF03764 Elongation factor G, domain IV ASU28_03150 PF00679 Elongation factor G C-terminus ASU28_03150 PF14492 Elongation Factor G, domain II ASU28_03175 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_03175 PF00107 Zinc-binding dehydrogenase ASU28_03185 PF01554 MatE ASU28_03190 PF00561 alpha/beta hydrolase fold ASU28_03195 PF03883 Peroxide stress protein YaaA ASU28_03205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_03230 PF00005 ABC transporter ASU28_03235 PF02361 Cobalt transport protein ASU28_03240 PF13190 PDGLE domain ASU28_03240 PF01891 Cobalt uptake substrate-specific transmembrane region ASU28_03245 PF13545 Crp-like helix-turn-helix domain ASU28_03250 PF09861 Lactate racemase N-terminal domain ASU28_03255 PF00731 AIR carboxylase ASU28_03260 PF01969 Protein of unknown function DUF111 ASU28_03265 PF01969 Protein of unknown function DUF111 ASU28_03270 PF00230 Major intrinsic protein ASU28_03275 PF02540 NAD synthase ASU28_03280 PF00107 Zinc-binding dehydrogenase ASU28_03280 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_03285 PF02110 Hydroxyethylthiazole kinase family ASU28_03290 PF08543 Phosphomethylpyrimidine kinase ASU28_03295 PF02581 Thiamine monophosphate synthase ASU28_03305 PF07722 Peptidase C26 ASU28_03315 PF13344 Haloacid dehalogenase-like hydrolase ASU28_03315 PF00293 NUDIX domain ASU28_03320 PF00324 Amino acid permease ASU28_03335 PF00690 Cation transporter/ATPase, N-terminus ASU28_03335 PF00689 Cation transporting ATPase, C-terminus ASU28_03340 PF01048 Phosphorylase superfamily ASU28_03345 PF04024 PspC domain ASU28_03360 PF00011 Hsp20/alpha crystallin family ASU28_03370 PF00083 Sugar (and other) transporter ASU28_03370 PF07690 Major Facilitator Superfamily ASU28_03380 PF07690 Major Facilitator Superfamily ASU28_03390 PF00248 Aldo/keto reductase family ASU28_03400 PF06100 MCRA family ASU28_03415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASU28_03420 PF02361 Cobalt transport protein ASU28_03425 PF00005 ABC transporter ASU28_03425 PF12558 ATP-binding cassette cobalt transporter ASU28_03430 PF07155 ECF-type riboflavin transporter, S component ASU28_03435 PF00392 Bacterial regulatory proteins, gntR family ASU28_03435 PF07702 UTRA domain ASU28_03460 PF00106 short chain dehydrogenase ASU28_03465 PF13732 Domain of unknown function (DUF4162) ASU28_03465 PF00005 ABC transporter ASU28_03480 PF00766 Electron transfer flavoprotein FAD-binding domain ASU28_03480 PF01012 Electron transfer flavoprotein domain ASU28_03485 PF12822 ECF transporter, substrate-specific component ASU28_03490 PF00440 Bacterial regulatory proteins, tetR family ASU28_03490 PF14278 Transcriptional regulator C-terminal region ASU28_03495 PF02733 Dak1 domain ASU28_03500 PF02733 Dak1 domain ASU28_03505 PF02734 DAK2 domain ASU28_03510 PF03610 PTS system fructose IIA component ASU28_03515 PF00230 Major intrinsic protein ASU28_03520 PF00356 Bacterial regulatory proteins, lacI family ASU28_03525 PF00356 Bacterial regulatory proteins, lacI family ASU28_03530 PF00128 Alpha amylase, catalytic domain ASU28_03535 PF13416 Bacterial extracellular solute-binding protein ASU28_03540 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_03545 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_03555 PF11896 Domain of unknown function (DUF3416) ASU28_03555 PF00128 Alpha amylase, catalytic domain ASU28_03560 PF17912 MalK OB fold domain ASU28_03560 PF00005 ABC transporter ASU28_03560 PF03459 TOBE domain ASU28_03565 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASU28_03565 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASU28_03565 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASU28_03575 PF00480 ROK family ASU28_03580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_03580 PF00367 phosphotransferase system, EIIB ASU28_03580 PF02378 Phosphotransferase system, EIIC ASU28_03585 PF08244 Glycosyl hydrolases family 32 C terminal ASU28_03585 PF00251 Glycosyl hydrolases family 32 N-terminal domain ASU28_03590 PF00356 Bacterial regulatory proteins, lacI family ASU28_03595 PF00128 Alpha amylase, catalytic domain ASU28_03600 PF00107 Zinc-binding dehydrogenase ASU28_03600 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_03605 PF03553 Na+/H+ antiporter family ASU28_03610 PF00128 Alpha amylase, catalytic domain ASU28_03625 PF17760 UvrA interaction domain ASU28_03625 PF00005 ABC transporter ASU28_03625 PF17755 UvrA DNA-binding domain ASU28_03635 PF00291 Pyridoxal-phosphate dependent enzyme ASU28_03640 PF13936 Helix-turn-helix domain ASU28_03640 PF00665 Integrase core domain ASU28_03645 PF12704 MacB-like periplasmic core domain ASU28_03645 PF02687 FtsX-like permease family ASU28_03650 PF00005 ABC transporter ASU28_03665 PF06737 Transglycosylase-like domain ASU28_03670 PF01476 LysM domain ASU28_03670 PF00877 NlpC/P60 family ASU28_03700 PF00871 Acetokinase family ASU28_03710 PF01047 MarR family ASU28_03715 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_03725 PF13416 Bacterial extracellular solute-binding protein ASU28_03740 PF00005 ABC transporter ASU28_03740 PF08402 TOBE domain ASU28_03770 PF00392 Bacterial regulatory proteins, gntR family ASU28_03775 PF00005 ABC transporter ASU28_03785 PF00465 Iron-containing alcohol dehydrogenase ASU28_03785 PF00171 Aldehyde dehydrogenase family ASU28_03790 PF01116 Fructose-bisphosphate aldolase class-II ASU28_03810 PF03577 Peptidase family C69 ASU28_03820 PF02632 BioY family ASU28_03825 PF03099 Biotin/lipoate A/B protein ligase family ASU28_03825 PF02237 Biotin protein ligase C terminal domain ASU28_03830 PF00155 Aminotransferase class I and II ASU28_03840 PF00403 Heavy-metal-associated domain ASU28_03860 PF00854 POT family ASU28_03900 PF04973 Nicotinamide mononucleotide transporter ASU28_03905 PF14748 Pyrroline-5-carboxylate reductase dimerisation ASU28_03905 PF03807 NADP oxidoreductase coenzyme F420-dependent ASU28_03910 PF01979 Amidohydrolase family ASU28_03910 PF13382 Adenine deaminase C-terminal domain ASU28_03915 PF00392 Bacterial regulatory proteins, gntR family ASU28_03915 PF07702 UTRA domain ASU28_03920 PF03808 Glycosyl transferase WecB/TagA/CpsF family ASU28_03925 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ASU28_03925 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ASU28_03925 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ASU28_03930 PF02540 NAD synthase ASU28_03935 PF00690 Cation transporter/ATPase, N-terminus ASU28_03935 PF00689 Cation transporting ATPase, C-terminus ASU28_03945 PF16921 Tex protein YqgF-like domain ASU28_03945 PF09371 Tex-like protein N-terminal domain ASU28_03945 PF00575 S1 RNA binding domain ASU28_03945 PF17674 HHH domain ASU28_03950 PF10263 SprT-like family ASU28_03955 PF01842 ACT domain ASU28_03955 PF03447 Homoserine dehydrogenase, NAD binding domain ASU28_03955 PF00742 Homoserine dehydrogenase ASU28_03960 PF08544 GHMP kinases C terminal ASU28_03960 PF00288 GHMP kinases N terminal domain ASU28_03975 PF03610 PTS system fructose IIA component ASU28_03975 PF03830 PTS system sorbose subfamily IIB component ASU28_03980 PF03609 PTS system sorbose-specific iic component ASU28_03985 PF03613 PTS system mannose/fructose/sorbose family IID component ASU28_03995 PF03610 PTS system fructose IIA component ASU28_03995 PF00158 Sigma-54 interaction domain ASU28_03995 PF00874 PRD domain ASU28_04000 PF03830 PTS system sorbose subfamily IIB component ASU28_04000 PF03610 PTS system fructose IIA component ASU28_04005 PF03610 PTS system fructose IIA component ASU28_04005 PF03830 PTS system sorbose subfamily IIB component ASU28_04010 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASU28_04010 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASU28_04020 PF00289 Biotin carboxylase, N-terminal domain ASU28_04020 PF02785 Biotin carboxylase C-terminal domain ASU28_04020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_04025 PF01039 Carboxyl transferase domain ASU28_04030 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ASU28_04035 PF03816 Cell envelope-related transcriptional attenuator domain ASU28_04045 PF00892 EamA-like transporter family ASU28_04050 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_04060 PF03051 Peptidase C1-like family ASU28_04065 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASU28_04075 PF00692 dUTPase ASU28_04080 PF18073 Rubredoxin metal binding domain ASU28_04095 PF09190 DALR domain ASU28_04095 PF01406 tRNA synthetases class I (C) catalytic domain ASU28_04100 PF00636 Ribonuclease III domain ASU28_04105 PF00588 SpoU rRNA Methylase family ASU28_04105 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASU28_04120 PF00471 Ribosomal protein L33 ASU28_04130 PF02357 Transcription termination factor nusG ASU28_04130 PF00467 KOW motif ASU28_04140 PF00298 Ribosomal protein L11, RNA binding domain ASU28_04140 PF03946 Ribosomal protein L11, N-terminal domain ASU28_04145 PF00687 Ribosomal protein L1p/L10e family ASU28_04150 PF00466 Ribosomal protein L10 ASU28_04155 PF16320 Ribosomal protein L7/L12 dimerisation domain ASU28_04155 PF00542 Ribosomal protein L7/L12 C-terminal domain ASU28_04160 PF13936 Helix-turn-helix domain ASU28_04160 PF00665 Integrase core domain ASU28_04175 PF03706 Lysylphosphatidylglycerol synthase TM region ASU28_04175 PF09924 Uncharacterised conserved protein (DUF2156) ASU28_04180 PF03641 Possible lysine decarboxylase ASU28_04185 PF00268 Ribonucleotide reductase, small chain ASU28_04190 PF08343 Ribonucleotide reductase N-terminal ASU28_04190 PF00317 Ribonucleotide reductase, all-alpha domain ASU28_04190 PF02867 Ribonucleotide reductase, barrel domain ASU28_04195 PF00462 Glutaredoxin ASU28_04200 PF05175 Methyltransferase small domain ASU28_04205 PF14437 MafB19-like deaminase ASU28_04210 PF12169 DNA polymerase III subunits gamma and tau domain III ASU28_04215 PF02575 YbaB/EbfC DNA-binding family ASU28_04220 PF02132 RecR protein ASU28_04220 PF13662 Toprim domain ASU28_04230 PF02223 Thymidylate kinase ASU28_04235 PF06153 Cyclic-di-AMP receptor ASU28_04240 PF09115 DNA polymerase III, delta subunit, C terminal ASU28_04245 PF06156 Initiation control protein YabA ASU28_04250 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASU28_04260 PF16363 GDP-mannose 4,6 dehydratase ASU28_04265 PF00266 Aminotransferase class-V ASU28_04270 PF13419 Haloacid dehalogenase-like hydrolase ASU28_04275 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04280 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04285 PF00005 ABC transporter ASU28_04295 PF00814 Glycoprotease family ASU28_04300 PF00583 Acetyltransferase (GNAT) family ASU28_04305 PF00583 Acetyltransferase (GNAT) family ASU28_04310 PF00814 Glycoprotease family ASU28_04315 PF00005 ABC transporter ASU28_04315 PF16326 ABC transporter C-terminal domain ASU28_04315 PF12848 ABC transporter ASU28_04320 PF02629 CoA binding domain ASU28_04320 PF06971 Putative DNA-binding protein N-terminus ASU28_04325 PF02517 CPBP intramembrane metalloprotease ASU28_04330 PF00166 Chaperonin 10 Kd subunit ASU28_04335 PF00118 TCP-1/cpn60 chaperonin family ASU28_04340 PF13520 Amino acid permease ASU28_04345 PF00953 Glycosyl transferase family 4 ASU28_04350 PF12849 PBP superfamily domain ASU28_04355 PF09186 Domain of unknown function (DUF1949) ASU28_04355 PF01205 Uncharacterized protein family UPF0029 ASU28_04360 PF04851 Type III restriction enzyme, res subunit ASU28_04360 PF00271 Helicase conserved C-terminal domain ASU28_04365 PF00156 Phosphoribosyl transferase domain ASU28_04370 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ASU28_04370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ASU28_04375 PF01043 SecA preprotein cross-linking domain ASU28_04375 PF07516 SecA Wing and Scaffold domain ASU28_04375 PF07517 SecA DEAD-like domain ASU28_04380 PF00472 RF-1 domain ASU28_04380 PF03462 PCRF domain ASU28_04385 PF17820 PDZ domain ASU28_04390 PF00486 Transcriptional regulatory protein, C terminal ASU28_04390 PF00072 Response regulator receiver domain ASU28_04395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_04395 PF00512 His Kinase A (phospho-acceptor) domain ASU28_04395 PF16736 Single Cache-like ASU28_04395 PF00989 PAS fold ASU28_04400 PF12849 PBP superfamily domain ASU28_04405 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04410 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04415 PF00005 ABC transporter ASU28_04420 PF00005 ABC transporter ASU28_04425 PF01895 PhoU domain ASU28_04430 PF04024 PspC domain ASU28_04435 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ASU28_04440 PF07475 HPr Serine kinase C-terminal domain ASU28_04440 PF02603 HPr Serine kinase N terminus ASU28_04445 PF01790 Prolipoprotein diacylglyceryl transferase ASU28_04450 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ASU28_04450 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ASU28_04455 PF00483 Nucleotidyl transferase ASU28_04465 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_04465 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_04470 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_04475 PF04239 Protein of unknown function (DUF421) ASU28_04485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASU28_04485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASU28_04485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASU28_04485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASU28_04495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_04495 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_04510 PF07690 Major Facilitator Superfamily ASU28_04520 PF00271 Helicase conserved C-terminal domain ASU28_04520 PF04851 Type III restriction enzyme, res subunit ASU28_04520 PF02151 UvrB/uvrC motif ASU28_04520 PF12344 Ultra-violet resistance protein B ASU28_04520 PF17757 UvrB interaction domain ASU28_04525 PF00005 ABC transporter ASU28_04525 PF17755 UvrA DNA-binding domain ASU28_04525 PF17760 UvrA interaction domain ASU28_04530 PF02664 S-Ribosylhomocysteinase (LuxS) ASU28_04535 PF00764 Arginosuccinate synthase ASU28_04540 PF00206 Lyase ASU28_04540 PF14698 Argininosuccinate lyase C-terminal ASU28_04550 PF03668 P-loop ATPase protein family ASU28_04555 PF01933 Uncharacterised protein family UPF0052 ASU28_04560 PF14527 WhiA LAGLIDADG-like domain ASU28_04560 PF02650 WhiA C-terminal HTH domain ASU28_04560 PF10298 WhiA N-terminal LAGLIDADG-like domain ASU28_04565 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_04570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASU28_04570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASU28_04575 PF00574 Clp protease ASU28_04585 PF04963 Sigma-54 factor, core binding domain ASU28_04585 PF04552 Sigma-54, DNA binding domain ASU28_04585 PF00309 Sigma-54 factor, Activator interacting domain (AID) ASU28_04590 PF04198 Putative sugar-binding domain ASU28_04595 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASU28_04595 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASU28_04600 PF00162 Phosphoglycerate kinase ASU28_04605 PF00121 Triosephosphate isomerase ASU28_04610 PF00113 Enolase, C-terminal TIM barrel domain ASU28_04610 PF03952 Enolase, N-terminal domain ASU28_04620 PF00654 Voltage gated chloride channel ASU28_04625 PF03840 Preprotein translocase SecG subunit ASU28_04630 PF12146 Serine aminopeptidase, S33 ASU28_04635 PF17876 Cold shock domain ASU28_04635 PF00773 RNB domain ASU28_04635 PF08206 Ribonuclease B OB domain ASU28_04635 PF00575 S1 RNA binding domain ASU28_04640 PF01668 SmpB protein ASU28_04645 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04650 PF00005 ABC transporter ASU28_04665 PF03167 Uracil DNA glycosylase superfamily ASU28_04670 PF01515 Phosphate acetyl/butaryl transferase ASU28_04675 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ASU28_04685 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASU28_04685 PF11490 DNA polymerase III polC-type N-terminus II ASU28_04685 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASU28_04685 PF02811 PHP domain ASU28_04685 PF00929 Exonuclease ASU28_04685 PF14480 DNA polymerase III polC-type N-terminus I ASU28_04685 PF14579 Helix-hairpin-helix motif ASU28_04690 PF03372 Endonuclease/Exonuclease/phosphatase family ASU28_04695 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_04700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ASU28_04700 PF01565 FAD binding domain ASU28_04705 PF00999 Sodium/hydrogen exchanger family ASU28_04720 PF02457 DisA bacterial checkpoint controller nucleotide-binding ASU28_04730 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASU28_04730 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASU28_04730 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASU28_04730 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASU28_04735 PF01380 SIS domain ASU28_04755 PF01263 Aldose 1-epimerase ASU28_04770 PF00881 Nitroreductase family ASU28_04780 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASU28_04780 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASU28_04800 PF00266 Aminotransferase class-V ASU28_04840 PF02397 Bacterial sugar transferase ASU28_04875 PF02631 RecX family ASU28_04880 PF04167 Protein of unknown function (DUF402) ASU28_04885 PF01476 LysM domain ASU28_04885 PF00877 NlpC/P60 family ASU28_04885 PF08239 Bacterial SH3 domain ASU28_04900 PF07722 Peptidase C26 ASU28_04905 PF13520 Amino acid permease ASU28_04915 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_04915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_04920 PF01594 AI-2E family transporter ASU28_04925 PF01467 Cytidylyltransferase-like ASU28_04930 PF02447 GntP family permease ASU28_04935 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASU28_04935 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASU28_04940 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASU28_04940 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ASU28_04945 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_04945 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_04950 PF03144 Elongation factor Tu domain 2 ASU28_04950 PF16658 Class II release factor RF3, C-terminal domain ASU28_04950 PF00009 Elongation factor Tu GTP binding domain ASU28_04965 PF03466 LysR substrate binding domain ASU28_04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_04980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASU28_04985 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04990 PF12911 N-terminal TM domain of oligopeptide transport permease C ASU28_04990 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_04995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASU28_04995 PF00005 ABC transporter ASU28_05000 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASU28_05000 PF00005 ABC transporter ASU28_05010 PF00589 Phage integrase family ASU28_05015 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_05015 PF17871 AAA lid domain ASU28_05015 PF07724 AAA domain (Cdc48 subfamily) ASU28_05015 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_05025 PF00381 PTS HPr component phosphorylation site ASU28_05030 PF05524 PEP-utilising enzyme, N-terminal ASU28_05030 PF02896 PEP-utilising enzyme, TIM barrel domain ASU28_05030 PF00391 PEP-utilising enzyme, mobile domain ASU28_05035 PF00534 Glycosyl transferases group 1 ASU28_05035 PF13439 Glycosyltransferase Family 4 ASU28_05040 PF00534 Glycosyl transferases group 1 ASU28_05040 PF13439 Glycosyltransferase Family 4 ASU28_05050 PF00768 D-alanyl-D-alanine carboxypeptidase ASU28_05050 PF07943 Penicillin-binding protein 5, C-terminal domain ASU28_05055 PF00155 Aminotransferase class I and II ASU28_05060 PF08796 Protein of unknown function (DUF1797) ASU28_05065 PF00884 Sulfatase ASU28_05130 PF00156 Phosphoribosyl transferase domain ASU28_05155 PF01566 Natural resistance-associated macrophage protein ASU28_05160 PF00762 Ferrochelatase ASU28_05165 PF00324 Amino acid permease ASU28_05170 PF02574 Homocysteine S-methyltransferase ASU28_05175 PF00534 Glycosyl transferases group 1 ASU28_05175 PF00862 Sucrose synthase ASU28_05185 PF02772 S-adenosylmethionine synthetase, central domain ASU28_05185 PF02773 S-adenosylmethionine synthetase, C-terminal domain ASU28_05185 PF00438 S-adenosylmethionine synthetase, N-terminal domain ASU28_05190 PF07690 Major Facilitator Superfamily ASU28_05205 PF00862 Sucrose synthase ASU28_05205 PF00534 Glycosyl transferases group 1 ASU28_05210 PF00534 Glycosyl transferases group 1 ASU28_05220 PF06962 Putative rRNA methylase ASU28_05225 PF01569 PAP2 superfamily ASU28_05230 PF09334 tRNA synthetases class I (M) ASU28_05230 PF00133 tRNA synthetases class I (I, L, M and V) ASU28_05230 PF13603 Leucyl-tRNA synthetase, Domain 2 ASU28_05230 PF08264 Anticodon-binding domain of tRNA ASU28_05235 PF14667 Polysaccharide biosynthesis C-terminal domain ASU28_05235 PF01943 Polysaccharide biosynthesis protein ASU28_05240 PF01479 S4 domain ASU28_05240 PF00849 RNA pseudouridylate synthase ASU28_05245 PF01256 Carbohydrate kinase ASU28_05250 PF01546 Peptidase family M20/M25/M40 ASU28_05255 PF00582 Universal stress protein family ASU28_05260 PF17912 MalK OB fold domain ASU28_05260 PF00005 ABC transporter ASU28_05265 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_05270 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_05280 PF03009 Glycerophosphoryl diester phosphodiesterase family ASU28_05285 PF01712 Deoxynucleoside kinase ASU28_05290 PF01741 Large-conductance mechanosensitive channel, MscL ASU28_05310 PF12146 Serine aminopeptidase, S33 ASU28_05340 PF13411 MerR HTH family regulatory protein ASU28_05355 PF00248 Aldo/keto reductase family ASU28_05365 PF06736 Protein of unknown function (DUF1211) ASU28_05370 PF00248 Aldo/keto reductase family ASU28_05375 PF00248 Aldo/keto reductase family ASU28_05385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_05385 PF03466 LysR substrate binding domain ASU28_05395 PF13460 NAD(P)H-binding ASU28_05405 PF00106 short chain dehydrogenase ASU28_05410 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ASU28_05415 PF01625 Peptide methionine sulfoxide reductase ASU28_05420 PF03466 LysR substrate binding domain ASU28_05420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_05430 PF00106 short chain dehydrogenase ASU28_05445 PF01161 Phosphatidylethanolamine-binding protein ASU28_05460 PF00106 short chain dehydrogenase ASU28_05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_05520 PF17203 Single cache domain 3 ASU28_05520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ASU28_05520 PF00989 PAS fold ASU28_05525 PF00072 Response regulator receiver domain ASU28_05525 PF04397 LytTr DNA-binding domain ASU28_05545 PF01047 MarR family ASU28_05560 PF17755 UvrA DNA-binding domain ASU28_05560 PF00005 ABC transporter ASU28_05560 PF17760 UvrA interaction domain ASU28_05595 PF07457 Protein of unknown function (DUF1516) ASU28_05600 PF02574 Homocysteine S-methyltransferase ASU28_05600 PF02219 Methylenetetrahydrofolate reductase ASU28_05605 PF08267 Cobalamin-independent synthase, N-terminal domain ASU28_05605 PF01717 Cobalamin-independent synthase, Catalytic domain ASU28_05615 PF14306 PUA-like domain ASU28_05615 PF01747 ATP-sulfurylase ASU28_05625 PF02272 DHHA1 domain ASU28_05625 PF01368 DHH family ASU28_05635 PF02080 TrkA-C domain ASU28_05635 PF03600 Citrate transporter ASU28_05640 PF01554 MatE ASU28_05660 PF13673 Acetyltransferase (GNAT) domain ASU28_05665 PF03485 Arginyl tRNA synthetase N terminal domain ASU28_05665 PF00750 tRNA synthetases class I (R) ASU28_05665 PF05746 DALR anticodon binding domain ASU28_05675 PF00005 ABC transporter ASU28_05675 PF02687 FtsX-like permease family ASU28_05675 PF12704 MacB-like periplasmic core domain ASU28_05685 PF00158 Sigma-54 interaction domain ASU28_05685 PF00874 PRD domain ASU28_05685 PF03610 PTS system fructose IIA component ASU28_05695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ASU28_05700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_05705 PF02378 Phosphotransferase system, EIIC ASU28_05710 PF00232 Glycosyl hydrolase family 1 ASU28_05720 PF03734 L,D-transpeptidase catalytic domain ASU28_05725 PF00550 Phosphopantetheine attachment site ASU28_05730 PF00392 Bacterial regulatory proteins, gntR family ASU28_05730 PF00155 Aminotransferase class I and II ASU28_05740 PF00155 Aminotransferase class I and II ASU28_05745 PF01316 Arginine repressor, DNA binding domain ASU28_05745 PF02863 Arginine repressor, C-terminal domain ASU28_05750 PF00905 Penicillin binding protein transpeptidase domain ASU28_05750 PF00912 Transglycosylase ASU28_05755 PF06133 Control of competence regulator ComK, YlbF/YmcA ASU28_05760 PF00149 Calcineurin-like phosphoesterase ASU28_05765 PF13514 AAA domain ASU28_05770 PF01966 HD domain ASU28_05775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_05775 PF03466 LysR substrate binding domain ASU28_05780 PF03358 NADPH-dependent FMN reductase ASU28_05780 PF04205 FMN-binding domain ASU28_05780 PF00890 FAD binding domain ASU28_05785 PF04205 FMN-binding domain ASU28_05785 PF03358 NADPH-dependent FMN reductase ASU28_05785 PF00890 FAD binding domain ASU28_05805 PF00403 Heavy-metal-associated domain ASU28_05815 PF00488 MutS domain V ASU28_05815 PF05190 MutS family domain IV ASU28_05815 PF05192 MutS domain III ASU28_05815 PF01624 MutS domain I ASU28_05815 PF05188 MutS domain II ASU28_05820 PF05190 MutS family domain IV ASU28_05820 PF00488 MutS domain V ASU28_05820 PF05188 MutS domain II ASU28_05820 PF01624 MutS domain I ASU28_05820 PF05192 MutS domain III ASU28_05825 PF00535 Glycosyl transferase family 2 ASU28_05840 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASU28_05840 PF01872 RibD C-terminal domain ASU28_05845 PF00677 Lumazine binding domain ASU28_05850 PF00925 GTP cyclohydrolase II ASU28_05850 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASU28_05855 PF00885 6,7-dimethyl-8-ribityllumazine synthase ASU28_05860 PF04650 YSIRK type signal peptide ASU28_05860 PF07501 G5 domain ASU28_05860 PF00728 Glycosyl hydrolase family 20, catalytic domain ASU28_05860 PF00746 LPXTG cell wall anchor motif ASU28_05875 PF03170 Bacterial cellulose synthase subunit ASU28_05875 PF03552 Cellulose synthase ASU28_05875 PF07238 PilZ domain ASU28_05875 PF00535 Glycosyl transferase family 2 ASU28_05910 PF13545 Crp-like helix-turn-helix domain ASU28_05910 PF00027 Cyclic nucleotide-binding domain ASU28_05950 PF00639 PPIC-type PPIASE domain ASU28_05960 PF01230 HIT domain ASU28_05965 PF00005 ABC transporter ASU28_05970 PF05975 Bacterial ABC transporter protein EcsB ASU28_05975 PF01636 Phosphotransferase enzyme family ASU28_05980 PF02390 Putative methyltransferase ASU28_05990 PF01588 Putative tRNA binding domain ASU28_05990 PF14794 Domain of unknown function (DUF4479) ASU28_05995 PF09397 Ftsk gamma domain ASU28_05995 PF17854 FtsK alpha domain ASU28_05995 PF01580 FtsK/SpoIIIE family ASU28_06000 PF01225 Mur ligase family, catalytic domain ASU28_06000 PF02875 Mur ligase family, glutamate ligase domain ASU28_06000 PF08245 Mur ligase middle domain ASU28_06005 PF17910 FeoB cytosolic helical domain ASU28_06005 PF02421 Ferrous iron transport protein B ASU28_06005 PF07670 Nucleoside recognition ASU28_06005 PF07664 Ferrous iron transport protein B C terminus ASU28_06015 PF00005 ABC transporter ASU28_06020 PF01458 Uncharacterized protein family (UPF0051) ASU28_06025 PF00266 Aminotransferase class-V ASU28_06030 PF01592 NifU-like N terminal domain ASU28_06035 PF01458 Uncharacterized protein family (UPF0051) ASU28_06045 PF00005 ABC transporter ASU28_06050 PF01032 FecCD transport family ASU28_06055 PF00258 Flavodoxin ASU28_06060 PF02391 MoaE protein ASU28_06070 PF04055 Radical SAM superfamily ASU28_06070 PF06463 Molybdenum Cofactor Synthesis C ASU28_06075 PF07690 Major Facilitator Superfamily ASU28_06080 PF01883 Iron-sulfur cluster assembly protein ASU28_06105 PF00196 Bacterial regulatory proteins, luxR family ASU28_06105 PF00072 Response regulator receiver domain ASU28_06110 PF17200 Single Cache domain 2 ASU28_06110 PF07730 Histidine kinase ASU28_06125 PF12804 MobA-like NTP transferase domain ASU28_06130 PF01967 MoaC family ASU28_06135 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ASU28_06140 PF00994 Probable molybdopterin binding domain ASU28_06140 PF03454 MoeA C-terminal region (domain IV) ASU28_06140 PF03453 MoeA N-terminal region (domain I and II) ASU28_06145 PF00994 Probable molybdopterin binding domain ASU28_06150 PF00899 ThiF family ASU28_06155 PF01568 Molydopterin dinucleotide binding domain ASU28_06155 PF00384 Molybdopterin oxidoreductase ASU28_06155 PF14710 Respiratory nitrate reductase alpha N-terminal ASU28_06160 PF14711 Respiratory nitrate reductase beta C-terminal ASU28_06160 PF13247 4Fe-4S dicluster domain ASU28_06170 PF02665 Nitrate reductase gamma subunit ASU28_06185 PF01027 Inhibitor of apoptosis-promoting Bax1 ASU28_06190 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASU28_06190 PF01367 5'-3' exonuclease, C-terminal SAM fold ASU28_06190 PF00476 DNA polymerase family A ASU28_06195 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ASU28_06195 PF06827 Zinc finger found in FPG and IleRS ASU28_06195 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ASU28_06200 PF01121 Dephospho-CoA kinase ASU28_06205 PF03477 ATP cone domain ASU28_06210 PF07261 Replication initiation and membrane attachment ASU28_06215 PF01695 IstB-like ATP binding protein ASU28_06215 PF07319 Primosomal protein DnaI N-terminus ASU28_06220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASU28_06220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASU28_06220 PF02824 TGS domain ASU28_06220 PF03129 Anticodon binding domain ASU28_06225 PF05198 Translation initiation factor IF-3, N-terminal domain ASU28_06225 PF00707 Translation initiation factor IF-3, C-terminal domain ASU28_06230 PF01632 Ribosomal protein L35 ASU28_06235 PF00453 Ribosomal protein L20 ASU28_06245 PF16193 AAA C-terminal domain ASU28_06245 PF12002 MgsA AAA+ ATPase C terminal ASU28_06245 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASU28_06250 PF00107 Zinc-binding dehydrogenase ASU28_06250 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_06255 PF01638 HxlR-like helix-turn-helix ASU28_06260 PF01177 Asp/Glu/Hydantoin racemase ASU28_06270 PF01867 CRISPR associated protein Cas1 ASU28_06275 PF14480 DNA polymerase III polC-type N-terminus I ASU28_06275 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASU28_06275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASU28_06275 PF11490 DNA polymerase III polC-type N-terminus II ASU28_06275 PF02811 PHP domain ASU28_06275 PF00929 Exonuclease ASU28_06275 PF14579 Helix-hairpin-helix motif ASU28_06280 PF18395 Cas3 C-terminal domain ASU28_06280 PF00270 DEAD/DEAH box helicase ASU28_06280 PF18019 HD domain ASU28_06295 PF09344 CT1975-like protein ASU28_06310 PF00535 Glycosyl transferase family 2 ASU28_06320 PF13419 Haloacid dehalogenase-like hydrolase ASU28_06325 PF01926 50S ribosome-binding GTPase ASU28_06330 PF01985 CRS1 / YhbY (CRM) domain ASU28_06335 PF01467 Cytidylyltransferase-like ASU28_06340 PF01966 HD domain ASU28_06350 PF13649 Methyltransferase domain ASU28_06355 PF05636 HIGH Nucleotidyl Transferase ASU28_06375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASU28_06375 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ASU28_06380 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_06380 PF16193 AAA C-terminal domain ASU28_06380 PF12002 MgsA AAA+ ATPase C terminal ASU28_06385 PF00072 Response regulator receiver domain ASU28_06385 PF00486 Transcriptional regulatory protein, C terminal ASU28_06390 PF00512 His Kinase A (phospho-acceptor) domain ASU28_06390 PF18719 ArlS sensor domain ASU28_06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_06400 PF13476 AAA domain ASU28_06405 PF12320 Type 5 capsule protein repressor C-terminal domain ASU28_06405 PF00149 Calcineurin-like phosphoesterase ASU28_06415 PF02096 60Kd inner membrane protein ASU28_06420 PF00708 Acylphosphatase ASU28_06425 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASU28_06425 PF00588 SpoU rRNA Methylase family ASU28_06435 PF01638 HxlR-like helix-turn-helix ASU28_06440 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ASU28_06440 PF01409 tRNA synthetases class II core domain (F) ASU28_06445 PF03483 B3/4 domain ASU28_06445 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ASU28_06445 PF03484 tRNA synthetase B5 domain ASU28_06445 PF03147 Ferredoxin-fold anticodon binding domain ASU28_06445 PF01588 Putative tRNA binding domain ASU28_06450 PF02618 YceG-like family ASU28_06455 PF00485 Phosphoribulokinase / Uridine kinase family ASU28_06460 PF03449 Transcription elongation factor, N-terminal ASU28_06460 PF01272 Transcription elongation factor, GreA/GreB, C-term ASU28_06475 PF01521 Iron-sulphur cluster biosynthesis ASU28_06485 PF00905 Penicillin binding protein transpeptidase domain ASU28_06485 PF03717 Penicillin-binding Protein dimerisation domain ASU28_06490 PF01812 5-formyltetrahydrofolate cyclo-ligase family ASU28_06505 PF00480 ROK family ASU28_06510 PF01174 SNO glutamine amidotransferase family ASU28_06520 PF03009 Glycerophosphoryl diester phosphodiesterase family ASU28_06530 PF13411 MerR HTH family regulatory protein ASU28_06535 PF00120 Glutamine synthetase, catalytic domain ASU28_06535 PF03951 Glutamine synthetase, beta-Grasp domain ASU28_06575 PF00829 Ribosomal prokaryotic L21 protein ASU28_06585 PF01016 Ribosomal L27 protein ASU28_06590 PF00557 Metallopeptidase family M24 ASU28_06590 PF01321 Creatinase/Prolidase N-terminal domain ASU28_06595 PF09285 Elongation factor P, C-terminal ASU28_06595 PF01132 Elongation factor P (EF-P) OB domain ASU28_06595 PF08207 Elongation factor P (EF-P) KOW-like domain ASU28_06600 PF03780 Asp23 family, cell envelope-related function ASU28_06605 PF01029 NusB family ASU28_06610 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ASU28_06610 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ASU28_06615 PF02601 Exonuclease VII, large subunit ASU28_06615 PF13742 OB-fold nucleic acid binding domain ASU28_06620 PF02609 Exonuclease VII small subunit ASU28_06625 PF00348 Polyprenyl synthetase ASU28_06630 PF01479 S4 domain ASU28_06630 PF01728 FtsJ-like methyltransferase ASU28_06635 PF02863 Arginine repressor, C-terminal domain ASU28_06635 PF01316 Arginine repressor, DNA binding domain ASU28_06640 PF13476 AAA domain ASU28_06645 PF00005 ABC transporter ASU28_06645 PF00571 CBS domain ASU28_06650 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_06655 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ASU28_06660 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_06670 PF00625 Guanylate kinase ASU28_06675 PF01192 RNA polymerase Rpb6 ASU28_06680 PF04127 DNA / pantothenate metabolism flavoprotein ASU28_06680 PF02441 Flavoprotein ASU28_06685 PF17764 3′ DNA-binding domain (3′BD) ASU28_06685 PF00271 Helicase conserved C-terminal domain ASU28_06685 PF18074 Primosomal protein N C-terminal domain ASU28_06685 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ASU28_06685 PF04851 Type III restriction enzyme, res subunit ASU28_06690 PF00551 Formyl transferase ASU28_06690 PF02911 Formyl transferase, C-terminal domain ASU28_06695 PF01029 NusB family ASU28_06695 PF01189 16S rRNA methyltransferase RsmB/F ASU28_06705 PF03793 PASTA domain ASU28_06705 PF00069 Protein kinase domain ASU28_06710 PF16745 RsgA N-terminal domain ASU28_06710 PF03193 RsgA GTPase ASU28_06715 PF00834 Ribulose-phosphate 3 epimerase family ASU28_06720 PF04263 Thiamin pyrophosphokinase, catalytic domain ASU28_06720 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain ASU28_06725 PF00830 Ribosomal L28 family ASU28_06730 PF03780 Asp23 family, cell envelope-related function ASU28_06735 PF13684 Dihydroxyacetone kinase family ASU28_06735 PF02734 DAK2 domain ASU28_06740 PF00271 Helicase conserved C-terminal domain ASU28_06740 PF17191 RecG wedge domain ASU28_06740 PF00270 DEAD/DEAH box helicase ASU28_06745 PF02504 Fatty acid synthesis protein ASU28_06750 PF00550 Phosphopantetheine attachment site ASU28_06755 PF00035 Double-stranded RNA binding motif ASU28_06755 PF14622 Ribonuclease-III-like ASU28_06760 PF06470 SMC proteins Flexible Hinge Domain ASU28_06760 PF02463 RecF/RecN/SMC N terminal domain ASU28_06765 PF00448 SRP54-type protein, GTPase domain ASU28_06765 PF02881 SRP54-type protein, helical bundle domain ASU28_06770 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ASU28_06775 PF00448 SRP54-type protein, GTPase domain ASU28_06775 PF02881 SRP54-type protein, helical bundle domain ASU28_06775 PF02978 Signal peptide binding domain ASU28_06780 PF00886 Ribosomal protein S16 ASU28_06790 PF05239 PRC-barrel domain ASU28_06790 PF01782 RimM N-terminal domain ASU28_06795 PF01746 tRNA (Guanine-1)-methyltransferase ASU28_06800 PF01245 Ribosomal protein L19 ASU28_06825 PF16295 Tetracyclin repressor-like, C-terminal domain ASU28_06825 PF00440 Bacterial regulatory proteins, tetR family ASU28_06850 PF00005 ABC transporter ASU28_06860 PF00425 chorismate binding enzyme ASU28_06860 PF04715 Anthranilate synthase component I, N terminal region ASU28_06865 PF02885 Glycosyl transferase family, helical bundle domain ASU28_06865 PF00117 Glutamine amidotransferase class-I ASU28_06865 PF00591 Glycosyl transferase family, a/b domain ASU28_06870 PF02885 Glycosyl transferase family, helical bundle domain ASU28_06870 PF00591 Glycosyl transferase family, a/b domain ASU28_06875 PF00218 Indole-3-glycerol phosphate synthase ASU28_06880 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ASU28_06885 PF00291 Pyridoxal-phosphate dependent enzyme ASU28_06890 PF00290 Tryptophan synthase alpha chain ASU28_06900 PF13411 MerR HTH family regulatory protein ASU28_06905 PF00107 Zinc-binding dehydrogenase ASU28_06905 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_06915 PF00106 short chain dehydrogenase ASU28_06920 PF06445 GyrI-like small molecule binding domain ASU28_06920 PF12833 Helix-turn-helix domain ASU28_06925 PF07977 FabA-like domain ASU28_06930 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASU28_06930 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASU28_06935 PF00550 Phosphopantetheine attachment site ASU28_06940 PF00698 Acyl transferase domain ASU28_06950 PF00109 Beta-ketoacyl synthase, N-terminal domain ASU28_06950 PF02801 Beta-ketoacyl synthase, C-terminal domain ASU28_06955 PF00364 Biotin-requiring enzyme ASU28_06960 PF07977 FabA-like domain ASU28_06965 PF02785 Biotin carboxylase C-terminal domain ASU28_06965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_06965 PF00289 Biotin carboxylase, N-terminal domain ASU28_06970 PF01039 Carboxyl transferase domain ASU28_06975 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ASU28_07010 PF00005 ABC transporter ASU28_07020 PF04474 Protein of unknown function (DUF554) ASU28_07025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_07025 PF03466 LysR substrate binding domain ASU28_07030 PF03061 Thioesterase superfamily ASU28_07035 PF03193 RsgA GTPase ASU28_07045 PF07690 Major Facilitator Superfamily ASU28_07070 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ASU28_07085 PF03073 TspO/MBR family ASU28_07095 PF05656 Protein of unknown function (DUF805) ASU28_07100 PF00781 Diacylglycerol kinase catalytic domain ASU28_07115 PF05532 CsbD-like ASU28_07130 PF03577 Peptidase family C69 ASU28_07135 PF01361 Tautomerase enzyme ASU28_07140 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASU28_07140 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASU28_07165 PF00202 Aminotransferase class-III ASU28_07170 PF13520 Amino acid permease ASU28_07180 PF01189 16S rRNA methyltransferase RsmB/F ASU28_07180 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ASU28_07180 PF17126 RsmF rRNA methyltransferase first C-terminal domain ASU28_07195 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASU28_07195 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASU28_07195 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASU28_07200 PF01263 Aldose 1-epimerase ASU28_07205 PF01070 FMN-dependent dehydrogenase ASU28_07210 PF00288 GHMP kinases N terminal domain ASU28_07210 PF08544 GHMP kinases C terminal ASU28_07220 PF00288 GHMP kinases N terminal domain ASU28_07225 PF00929 Exonuclease ASU28_07225 PF13307 Helicase C-terminal domain ASU28_07225 PF04851 Type III restriction enzyme, res subunit ASU28_07235 PF00155 Aminotransferase class I and II ASU28_07240 PF00152 tRNA synthetases class II (D, K and N) ASU28_07240 PF01336 OB-fold nucleic acid binding domain ASU28_07250 PF09383 NIL domain ASU28_07250 PF00005 ABC transporter ASU28_07255 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_07260 PF03180 NLPA lipoprotein ASU28_07280 PF08402 TOBE domain ASU28_07280 PF00005 ABC transporter ASU28_07285 PF00905 Penicillin binding protein transpeptidase domain ASU28_07285 PF00912 Transglycosylase ASU28_07290 PF03838 Recombination protein U ASU28_07295 PF06908 YspA SLOG family ASU28_07300 PF05103 DivIVA protein ASU28_07305 PF01170 Putative RNA methylase family UPF0020 ASU28_07305 PF02926 THUMP domain ASU28_07310 PF00326 Prolyl oligopeptidase family ASU28_07320 PF00535 Glycosyl transferase family 2 ASU28_07340 PF02016 LD-carboxypeptidase N-terminal domain ASU28_07340 PF17676 LD-carboxypeptidase C-terminal domain ASU28_07355 PF00005 ABC transporter ASU28_07370 PF01266 FAD dependent oxidoreductase ASU28_07385 PF01268 Formate--tetrahydrofolate ligase ASU28_07390 PF01252 Signal peptidase (SPase) II ASU28_07395 PF01479 S4 domain ASU28_07395 PF00849 RNA pseudouridylate synthase ASU28_07400 PF00156 Phosphoribosyl transferase domain ASU28_07405 PF00117 Glutamine amidotransferase class-I ASU28_07405 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASU28_07410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_07410 PF02142 MGS-like domain ASU28_07410 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASU28_07420 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_07425 PF08818 Domain of unknown function (DU1801) ASU28_07450 PF00005 ABC transporter ASU28_07460 PF05670 NFACT protein RNA binding domain ASU28_07470 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_07530 PF00324 Amino acid permease ASU28_07545 PF02652 L-lactate permease ASU28_07555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ASU28_07560 PF16912 Glucose dehydrogenase C-terminus ASU28_07560 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_07565 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ASU28_07570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ASU28_07575 PF13673 Acetyltransferase (GNAT) domain ASU28_07605 PF01625 Peptide methionine sulfoxide reductase ASU28_07610 PF01641 SelR domain ASU28_07615 PF02833 DHHA2 domain ASU28_07615 PF01368 DHH family ASU28_07620 PF03466 LysR substrate binding domain ASU28_07620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_07625 PF03989 DNA gyrase C-terminal domain, beta-propeller ASU28_07625 PF00521 DNA gyrase/topoisomerase IV, subunit A ASU28_07630 PF00204 DNA gyrase B ASU28_07630 PF01751 Toprim domain ASU28_07630 PF00986 DNA gyrase B subunit, carboxyl terminus ASU28_07630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_07635 PF02660 Glycerol-3-phosphate acyltransferase ASU28_07640 PF01263 Aldose 1-epimerase ASU28_07645 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_07645 PF07724 AAA domain (Cdc48 subfamily) ASU28_07645 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_07650 PF00227 Proteasome subunit ASU28_07655 PF00589 Phage integrase family ASU28_07655 PF02899 Phage integrase, N-terminal SAM-like domain ASU28_07660 PF01134 Glucose inhibited division protein A ASU28_07665 PF01131 DNA topoisomerase ASU28_07665 PF01751 Toprim domain ASU28_07665 PF01396 Topoisomerase DNA binding C4 zinc finger ASU28_07670 PF18255 DNA processing protein A sterile alpha motif domain ASU28_07670 PF02481 DNA recombination-mediator protein A ASU28_07675 PF01351 Ribonuclease HII ASU28_07680 PF01926 50S ribosome-binding GTPase ASU28_07685 PF01717 Cobalamin-independent synthase, Catalytic domain ASU28_07690 PF03466 LysR substrate binding domain ASU28_07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_07710 PF07690 Major Facilitator Superfamily ASU28_07715 PF01471 Putative peptidoglycan binding domain ASU28_07715 PF03572 Peptidase family S41 ASU28_07715 PF17820 PDZ domain ASU28_07720 PF06855 YozE SAM-like fold ASU28_07725 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) ASU28_07730 PF13472 GDSL-like Lipase/Acylhydrolase family ASU28_07735 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_07740 PF00186 Dihydrofolate reductase ASU28_07745 PF00303 Thymidylate synthase ASU28_07750 PF12848 ABC transporter ASU28_07750 PF16326 ABC transporter C-terminal domain ASU28_07750 PF00005 ABC transporter ASU28_07760 PF12627 Probable RNA and SrmB- binding site of polymerase A ASU28_07760 PF13735 tRNA nucleotidyltransferase domain 2 putative ASU28_07760 PF01743 Poly A polymerase head domain ASU28_07765 PF05173 Dihydrodipicolinate reductase, C-terminus ASU28_07765 PF01113 Dihydrodipicolinate reductase, N-terminus ASU28_07780 PF00216 Bacterial DNA-binding protein ASU28_07785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ASU28_07785 PF01926 50S ribosome-binding GTPase ASU28_07790 PF00575 S1 RNA binding domain ASU28_07795 PF02224 Cytidylate kinase ASU28_07820 PF03960 ArsC family ASU28_07835 PF07690 Major Facilitator Superfamily ASU28_07840 PF02541 Ppx/GppA phosphatase family ASU28_07845 PF13089 Polyphosphate kinase N-terminal domain ASU28_07845 PF02503 Polyphosphate kinase middle domain ASU28_07845 PF17941 Polyphosphate kinase C-terminal domain 1 ASU28_07845 PF13090 Polyphosphate kinase C-terminal domain 2 ASU28_07855 PF04991 LicD family ASU28_07865 PF00860 Permease family ASU28_07870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_07870 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_07870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_07875 PF01687 Riboflavin kinase ASU28_07875 PF06574 FAD synthetase ASU28_07880 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_07880 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_07880 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_07885 PF00561 alpha/beta hydrolase fold ASU28_07890 PF03099 Biotin/lipoate A/B protein ligase family ASU28_07890 PF02237 Biotin protein ligase C terminal domain ASU28_07895 PF01757 Acyltransferase family ASU28_07905 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal ASU28_07905 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ASU28_07905 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ASU28_07920 PF13520 Amino acid permease ASU28_07935 PF03099 Biotin/lipoate A/B protein ligase family ASU28_07935 PF00293 NUDIX domain ASU28_07940 PF00625 Guanylate kinase ASU28_07945 PF01475 Ferric uptake regulator family ASU28_07960 PF13419 Haloacid dehalogenase-like hydrolase ASU28_07965 PF00155 Aminotransferase class I and II ASU28_07970 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASU28_07970 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASU28_07980 PF00005 ABC transporter ASU28_07985 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASU28_07990 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_07995 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_08000 PF02378 Phosphotransferase system, EIIC ASU28_08000 PF00367 phosphotransferase system, EIIB ASU28_08000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_08010 PF00367 phosphotransferase system, EIIB ASU28_08010 PF02378 Phosphotransferase system, EIIC ASU28_08015 PF04794 YdjC-like protein ASU28_08020 PF13520 Amino acid permease ASU28_08025 PF01047 MarR family ASU28_08055 PF13167 GTP-binding GTPase N-terminal ASU28_08055 PF01926 50S ribosome-binding GTPase ASU28_08055 PF16360 GTP-binding GTPase Middle Region ASU28_08060 PF13344 Haloacid dehalogenase-like hydrolase ASU28_08060 PF00293 NUDIX domain ASU28_08065 PF00893 Small Multidrug Resistance protein ASU28_08075 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_08080 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_08085 PF02254 TrkA-N domain ASU28_08085 PF02080 TrkA-C domain ASU28_08085 PF00999 Sodium/hydrogen exchanger family ASU28_08090 PF04229 GrpB protein ASU28_08090 PF13673 Acetyltransferase (GNAT) domain ASU28_08095 PF09335 SNARE associated Golgi protein ASU28_08100 PF13538 UvrD-like helicase C-terminal domain ASU28_08105 PF03060 Nitronate monooxygenase ASU28_08110 PF00485 Phosphoribulokinase / Uridine kinase family ASU28_08115 PF00958 GMP synthase C terminal domain ASU28_08115 PF02540 NAD synthase ASU28_08115 PF00117 Glutamine amidotransferase class-I ASU28_08125 PF01381 Helix-turn-helix ASU28_08130 PF02517 CPBP intramembrane metalloprotease ASU28_08135 PF01638 HxlR-like helix-turn-helix ASU28_08140 PF07690 Major Facilitator Superfamily ASU28_08150 PF01381 Helix-turn-helix ASU28_08180 PF01757 Acyltransferase family ASU28_08185 PF04226 Transglycosylase associated protein ASU28_08200 PF03780 Asp23 family, cell envelope-related function ASU28_08210 PF01557 Fumarylacetoacetate (FAA) hydrolase family ASU28_08230 PF01433 Peptidase family M1 domain ASU28_08230 PF11838 ERAP1-like C-terminal domain ASU28_08280 PF13936 Helix-turn-helix domain ASU28_08280 PF00665 Integrase core domain ASU28_08285 PF16124 RecQ zinc-binding ASU28_08285 PF00271 Helicase conserved C-terminal domain ASU28_08285 PF00270 DEAD/DEAH box helicase ASU28_08285 PF09382 RQC domain ASU28_08285 PF00570 HRDC domain ASU28_08295 PF12822 ECF transporter, substrate-specific component ASU28_08300 PF00849 RNA pseudouridylate synthase ASU28_08300 PF01479 S4 domain ASU28_08305 PF04079 Segregation and condensation complex subunit ScpB ASU28_08310 PF02616 Segregation and condensation protein ScpA ASU28_08315 PF00583 Acetyltransferase (GNAT) family ASU28_08320 PF02899 Phage integrase, N-terminal SAM-like domain ASU28_08320 PF00589 Phage integrase family ASU28_08325 PF17783 CvfB-like winged helix domain ASU28_08325 PF13509 S1 domain ASU28_08330 PF04284 Protein of unknown function (DUF441) ASU28_08335 PF00391 PEP-utilising enzyme, mobile domain ASU28_08335 PF02887 Pyruvate kinase, alpha/beta domain ASU28_08335 PF00224 Pyruvate kinase, barrel domain ASU28_08340 PF00365 Phosphofructokinase ASU28_08345 PF14579 Helix-hairpin-helix motif ASU28_08345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASU28_08345 PF02811 PHP domain ASU28_08345 PF01336 OB-fold nucleic acid binding domain ASU28_08345 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASU28_08355 PF17871 AAA lid domain ASU28_08355 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_08355 PF07724 AAA domain (Cdc48 subfamily) ASU28_08355 PF02861 Clp amino terminal domain, pathogenicity island component ASU28_08355 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_08360 PF07687 Peptidase dimerisation domain ASU28_08360 PF01546 Peptidase family M20/M25/M40 ASU28_08365 PF01784 NIF3 (NGG1p interacting factor 3) ASU28_08370 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ASU28_08380 PF01061 ABC-2 type transporter ASU28_08385 PF13732 Domain of unknown function (DUF4162) ASU28_08385 PF00005 ABC transporter ASU28_08395 PF00391 PEP-utilising enzyme, mobile domain ASU28_08395 PF02896 PEP-utilising enzyme, TIM barrel domain ASU28_08395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ASU28_08410 PF00199 Catalase ASU28_08410 PF06628 Catalase-related immune-responsive ASU28_08415 PF07859 alpha/beta hydrolase fold ASU28_08430 PF07690 Major Facilitator Superfamily ASU28_08440 PF01546 Peptidase family M20/M25/M40 ASU28_08440 PF07687 Peptidase dimerisation domain ASU28_08445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_08445 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_08450 PF00455 DeoR C terminal sensor domain ASU28_08450 PF08220 DeoR-like helix-turn-helix domain ASU28_08460 PF03960 ArsC family ASU28_08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_08490 PF03466 LysR substrate binding domain ASU28_08495 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_08495 PF00107 Zinc-binding dehydrogenase ASU28_08500 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_08500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_08510 PF07730 Histidine kinase ASU28_08520 PF00005 ABC transporter ASU28_08525 PF13673 Acetyltransferase (GNAT) domain ASU28_08550 PF00005 ABC transporter ASU28_08570 PF00005 ABC transporter ASU28_08575 PF00392 Bacterial regulatory proteins, gntR family ASU28_08580 PF04545 Sigma-70, region 4 ASU28_08580 PF04539 Sigma-70 region 3 ASU28_08580 PF04542 Sigma-70 region 2 ASU28_08580 PF00140 Sigma-70 factor, region 1.2 ASU28_08580 PF03979 Sigma-70 factor, region 1.1 ASU28_08585 PF08275 DNA primase catalytic core, N-terminal domain ASU28_08585 PF10410 DnaB-helicase binding domain of primase ASU28_08585 PF01807 CHC2 zinc finger ASU28_08590 PF02092 Glycyl-tRNA synthetase beta subunit ASU28_08595 PF02091 Glycyl-tRNA synthetase alpha subunit ASU28_08600 PF11967 Recombination protein O N terminal ASU28_08600 PF02565 Recombination protein O C terminal ASU28_08605 PF01926 50S ribosome-binding GTPase ASU28_08605 PF07650 KH domain ASU28_08615 PF02130 Uncharacterized protein family UPF0054 ASU28_08620 PF02562 PhoH-like protein ASU28_08625 PF09424 Yqey-like protein ASU28_08630 PF01165 Ribosomal protein S21 ASU28_08635 PF03618 Kinase/pyrophosphorylase ASU28_08645 PF01261 Xylose isomerase-like TIM barrel ASU28_08650 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ASU28_08655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ASU28_08655 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ASU28_08660 PF01625 Peptide methionine sulfoxide reductase ASU28_08665 PF01336 OB-fold nucleic acid binding domain ASU28_08665 PF02938 GAD domain ASU28_08665 PF00152 tRNA synthetases class II (D, K and N) ASU28_08670 PF13393 Histidyl-tRNA synthetase ASU28_08670 PF03129 Anticodon binding domain ASU28_08675 PF08239 Bacterial SH3 domain ASU28_08675 PF01520 N-acetylmuramoyl-L-alanine amidase ASU28_08680 PF03881 Fructosamine kinase ASU28_08685 PF13419 Haloacid dehalogenase-like hydrolase ASU28_08690 PF02580 D-Tyr-tRNA(Tyr) deacylase ASU28_08695 PF04607 Region found in RelA / SpoT proteins ASU28_08695 PF13291 ACT domain ASU28_08695 PF02824 TGS domain ASU28_08705 PF04452 RNA methyltransferase ASU28_08715 PF02245 Methylpurine-DNA glycosylase (MPG) ASU28_08730 PF06421 GTP-binding protein LepA C-terminus ASU28_08730 PF00679 Elongation factor G C-terminus ASU28_08730 PF00009 Elongation factor Tu GTP binding domain ASU28_08730 PF03144 Elongation factor Tu domain 2 ASU28_08735 PF04914 DltD protein ASU28_08740 PF00550 Phosphopantetheine attachment site ASU28_08745 PF03062 MBOAT, membrane-bound O-acyltransferase family ASU28_08750 PF00501 AMP-binding enzyme ASU28_08750 PF13193 AMP-binding enzyme C-terminal domain ASU28_08760 PF11954 Domain of unknown function (DUF3471) ASU28_08760 PF00144 Beta-lactamase ASU28_08765 PF00684 DnaJ central domain ASU28_08765 PF01556 DnaJ C terminal domain ASU28_08765 PF00226 DnaJ domain ASU28_08770 PF00012 Hsp70 protein ASU28_08775 PF01025 GrpE ASU28_08780 PF01628 HrcA protein C terminal domain ASU28_08780 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ASU28_08785 PF03306 Alpha-acetolactate decarboxylase ASU28_08790 PF01687 Riboflavin kinase ASU28_08790 PF06574 FAD synthetase ASU28_08795 PF16198 tRNA pseudouridylate synthase B C-terminal domain ASU28_08795 PF01509 TruB family pseudouridylate synthase (N terminal domain) ASU28_08800 PF01202 Shikimate kinase ASU28_08805 PF02153 Prephenate dehydrogenase ASU28_08805 PF01842 ACT domain ASU28_08810 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASU28_08820 PF01264 Chorismate synthase ASU28_08830 PF02033 Ribosome-binding factor A ASU28_08835 PF00009 Elongation factor Tu GTP binding domain ASU28_08835 PF04760 Translation initiation factor IF-2, N-terminal region ASU28_08835 PF11987 Translation-initiation factor 2 ASU28_08840 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ASU28_08845 PF04296 Protein of unknown function (DUF448) ASU28_08850 PF13184 NusA-like KH domain ASU28_08850 PF08529 NusA N-terminal domain ASU28_08850 PF00575 S1 RNA binding domain ASU28_08855 PF02576 RimP N-terminal domain ASU28_08855 PF17384 RimP C-terminal SH3 domain ASU28_08860 PF14579 Helix-hairpin-helix motif ASU28_08860 PF02811 PHP domain ASU28_08860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASU28_08860 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASU28_08860 PF11490 DNA polymerase III polC-type N-terminus II ASU28_08860 PF00929 Exonuclease ASU28_08860 PF14480 DNA polymerase III polC-type N-terminus I ASU28_08865 PF04073 Aminoacyl-tRNA editing domain ASU28_08865 PF03129 Anticodon binding domain ASU28_08865 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASU28_08870 PF02163 Peptidase family M50 ASU28_08870 PF17820 PDZ domain ASU28_08880 PF01255 Putative undecaprenyl diphosphate synthase ASU28_08885 PF01765 Ribosome recycling factor ASU28_08890 PF00696 Amino acid kinase family ASU28_08895 PF00889 Elongation factor TS ASU28_08900 PF00318 Ribosomal protein S2 ASU28_08910 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASU28_08910 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASU28_08915 PF01541 GIY-YIG catalytic domain ASU28_08920 PF05175 Methyltransferase small domain ASU28_08925 PF01553 Acyltransferase ASU28_08930 PF03672 Uncharacterised protein family (UPF0154) ASU28_08935 PF05979 Bacterial protein of unknown function (DUF896) ASU28_08940 PF00717 Peptidase S24-like ASU28_08940 PF01726 LexA DNA binding domain ASU28_08955 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ASU28_08955 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ASU28_08970 PF00535 Glycosyl transferase family 2 ASU28_08975 PF03816 Cell envelope-related transcriptional attenuator domain ASU28_08980 PF00005 ABC transporter ASU28_08990 PF13936 Helix-turn-helix domain ASU28_08990 PF00665 Integrase core domain ASU28_09020 PF01906 Putative heavy-metal-binding ASU28_09035 PF00156 Phosphoribosyl transferase domain ASU28_09040 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ASU28_09040 PF02272 DHHA1 domain ASU28_09040 PF01368 DHH family ASU28_09040 PF17768 RecJ OB domain ASU28_09045 PF06305 Lipopolysaccharide assembly protein A domain ASU28_09050 PF00106 short chain dehydrogenase ASU28_09055 PF00753 Metallo-beta-lactamase superfamily ASU28_09055 PF12706 Beta-lactamase superfamily domain ASU28_09065 PF01018 GTP1/OBG ASU28_09065 PF01926 50S ribosome-binding GTPase ASU28_09065 PF09269 Domain of unknown function (DUF1967) ASU28_09070 PF00455 DeoR C terminal sensor domain ASU28_09070 PF08220 DeoR-like helix-turn-helix domain ASU28_09075 PF00294 pfkB family carbohydrate kinase ASU28_09080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_09080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASU28_09085 PF00149 Calcineurin-like phosphoesterase ASU28_09090 PF08459 UvrC Helix-hairpin-helix N-terminal ASU28_09090 PF01541 GIY-YIG catalytic domain ASU28_09090 PF02151 UvrB/uvrC motif ASU28_09095 PF00005 ABC transporter ASU28_09100 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_09115 PF01926 50S ribosome-binding GTPase ASU28_09120 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_09120 PF07724 AAA domain (Cdc48 subfamily) ASU28_09120 PF06689 ClpX C4-type zinc finger ASU28_09125 PF05698 Bacterial trigger factor protein (TF) C-terminus ASU28_09125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASU28_09125 PF05697 Bacterial trigger factor protein (TF) ASU28_09130 PF03144 Elongation factor Tu domain 2 ASU28_09130 PF03143 Elongation factor Tu C-terminal domain ASU28_09130 PF00009 Elongation factor Tu GTP binding domain ASU28_09140 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ASU28_09140 PF17770 Ribonuclease J C-terminal domain ASU28_09140 PF00753 Metallo-beta-lactamase superfamily ASU28_09145 PF00701 Dihydrodipicolinate synthetase family ASU28_09155 PF00312 Ribosomal protein S15 ASU28_09160 PF01649 Ribosomal protein S20 ASU28_09165 PF06144 DNA polymerase III, delta subunit ASU28_09170 PF00753 Metallo-beta-lactamase superfamily ASU28_09170 PF03772 Competence protein ASU28_09170 PF13567 Domain of unknown function (DUF4131) ASU28_09175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASU28_09180 PF10531 SLBB domain ASU28_09185 PF13180 PDZ domain ASU28_09185 PF05362 Lon protease (S16) C-terminal proteolytic domain ASU28_09190 PF01467 Cytidylyltransferase-like ASU28_09200 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ASU28_09205 PF00289 Biotin carboxylase, N-terminal domain ASU28_09205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_09205 PF02785 Biotin carboxylase C-terminal domain ASU28_09205 PF00364 Biotin-requiring enzyme ASU28_09205 PF00682 HMGL-like ASU28_09205 PF02436 Conserved carboxylase domain ASU28_09210 PF01098 Cell cycle protein ASU28_09220 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ASU28_09220 PF00535 Glycosyl transferase family 2 ASU28_09235 PF00009 Elongation factor Tu GTP binding domain ASU28_09235 PF14492 Elongation Factor G, domain II ASU28_09235 PF03144 Elongation factor Tu domain 2 ASU28_09235 PF00679 Elongation factor G C-terminus ASU28_09240 PF00459 Inositol monophosphatase family ASU28_09245 PF05256 Uncharacterised protein family (UPF0223) ASU28_09250 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_09250 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_09255 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_09255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_09260 PF00364 Biotin-requiring enzyme ASU28_09260 PF02817 e3 binding domain ASU28_09260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASU28_09265 PF02780 Transketolase, C-terminal domain ASU28_09265 PF02779 Transketolase, pyrimidine binding domain ASU28_09270 PF00676 Dehydrogenase E1 component ASU28_09275 PF01327 Polypeptide deformylase ASU28_09285 PF07288 Protein of unknown function (DUF1447) ASU28_09290 PF17770 Ribonuclease J C-terminal domain ASU28_09290 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ASU28_09290 PF00753 Metallo-beta-lactamase superfamily ASU28_09295 PF00781 Diacylglycerol kinase catalytic domain ASU28_09305 PF00877 NlpC/P60 family ASU28_09310 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASU28_09310 PF14572 Phosphoribosyl synthetase-associated domain ASU28_09315 PF13538 UvrD-like helicase C-terminal domain ASU28_09315 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ASU28_09315 PF14490 Helix-hairpin-helix containing domain ASU28_09325 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_09345 PF02080 TrkA-C domain ASU28_09345 PF02254 TrkA-N domain ASU28_09350 PF02386 Cation transport protein ASU28_09365 PF00266 Aminotransferase class-V ASU28_09370 PF01048 Phosphorylase superfamily ASU28_09380 PF00293 NUDIX domain ASU28_09385 PF01678 Diaminopimelate epimerase ASU28_09390 PF00133 tRNA synthetases class I (I, L, M and V) ASU28_09390 PF08264 Anticodon-binding domain of tRNA ASU28_09390 PF06827 Zinc finger found in FPG and IleRS ASU28_09395 PF05103 DivIVA protein ASU28_09405 PF02325 YGGT family ASU28_09410 PF04472 Cell division protein SepF ASU28_09415 PF00091 Tubulin/FtsZ family, GTPase domain ASU28_09415 PF12327 FtsZ family, C-terminal domain ASU28_09420 PF11983 Membrane-attachment and polymerisation-promoting switch ASU28_09420 PF02491 SHS2 domain inserted in FTSA ASU28_09425 PF08478 POTRA domain, FtsQ-type ASU28_09425 PF03799 Cell division protein FtsQ ASU28_09430 PF03033 Glycosyltransferase family 28 N-terminal domain ASU28_09430 PF04101 Glycosyltransferase family 28 C-terminal domain ASU28_09435 PF08245 Mur ligase middle domain ASU28_09435 PF02875 Mur ligase family, glutamate ligase domain ASU28_09440 PF00953 Glycosyl transferase family 4 ASU28_09440 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ASU28_09445 PF03793 PASTA domain ASU28_09445 PF03717 Penicillin-binding Protein dimerisation domain ASU28_09445 PF00905 Penicillin binding protein transpeptidase domain ASU28_09455 PF01795 MraW methylase family ASU28_09460 PF02381 MraZ protein, putative antitoxin-like ASU28_09475 PF01580 FtsK/SpoIIIE family ASU28_09475 PF17854 FtsK alpha domain ASU28_09475 PF09397 Ftsk gamma domain ASU28_09480 PF00588 SpoU rRNA Methylase family ASU28_09485 PF13460 NAD(P)H-binding ASU28_09490 PF05525 Branched-chain amino acid transport protein ASU28_09505 PF00253 Ribosomal protein S14p/S29e ASU28_09510 PF01594 AI-2E family transporter ASU28_09520 PF10282 Lactonase, 7-bladed beta-propeller ASU28_09525 PF03932 CutC family ASU28_09530 PF00849 RNA pseudouridylate synthase ASU28_09535 PF01513 ATP-NAD kinase ASU28_09540 PF04607 Region found in RelA / SpoT proteins ASU28_09550 PF01432 Peptidase family M3 ASU28_09550 PF08439 Oligopeptidase F ASU28_09560 PF05389 Negative regulator of genetic competence (MecA) ASU28_09565 PF03960 ArsC family ASU28_09570 PF12706 Beta-lactamase superfamily domain ASU28_09685 PF00575 S1 RNA binding domain ASU28_09690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASU28_09700 PF09335 SNARE associated Golgi protein ASU28_09710 PF13344 Haloacid dehalogenase-like hydrolase ASU28_09715 PF06265 Protein of unknown function (DUF1027) ASU28_09720 PF02872 5'-nucleotidase, C-terminal domain ASU28_09730 PF00324 Amino acid permease ASU28_09735 PF00871 Acetokinase family ASU28_09740 PF02384 N-6 DNA Methylase ASU28_09760 PF07963 Prokaryotic N-terminal methylation motif ASU28_09770 PF00437 Type II/IV secretion system protein ASU28_09775 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASU28_09775 PF00294 pfkB family carbohydrate kinase ASU28_09780 PF01709 Transcriptional regulator ASU28_09795 PF00356 Bacterial regulatory proteins, lacI family ASU28_09800 PF00557 Metallopeptidase family M24 ASU28_09800 PF01321 Creatinase/Prolidase N-terminal domain ASU28_09805 PF13411 MerR HTH family regulatory protein ASU28_09820 PF00924 Mechanosensitive ion channel ASU28_09825 PF07687 Peptidase dimerisation domain ASU28_09825 PF01546 Peptidase family M20/M25/M40 ASU28_09830 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_09830 PF00132 Bacterial transferase hexapeptide (six repeats) ASU28_09830 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ASU28_09845 PF01725 Ham1 family ASU28_09850 PF01177 Asp/Glu/Hydantoin racemase ASU28_09860 PF00085 Thioredoxin ASU28_09865 PF01713 Smr domain ASU28_09865 PF00488 MutS domain V ASU28_09875 PF06949 Protein of unknown function (DUF1292) ASU28_09880 PF03652 Holliday junction resolvase ASU28_09885 PF06135 IreB regulatory phosphoprotein ASU28_09890 PF01411 tRNA synthetases class II (A) ASU28_09890 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASU28_09890 PF02272 DHHA1 domain ASU28_09895 PF00271 Helicase conserved C-terminal domain ASU28_09895 PF00270 DEAD/DEAH box helicase ASU28_09900 PF01368 DHH family ASU28_09900 PF02272 DHHA1 domain ASU28_09905 PF00817 impB/mucB/samB family ASU28_09905 PF11799 impB/mucB/samB family C-terminal domain ASU28_09910 PF02699 Preprotein translocase subunit ASU28_09915 PF01702 Queuine tRNA-ribosyltransferase ASU28_09920 PF02547 Queuosine biosynthesis protein ASU28_09925 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASU28_09925 PF05491 RuvB C-terminal winged helix domain ASU28_09925 PF17864 RuvB AAA lid domain ASU28_09930 PF07499 RuvA, C-terminal domain ASU28_09930 PF01330 RuvA N terminal domain ASU28_09950 PF01119 DNA mismatch repair protein, C-terminal domain ASU28_09950 PF08676 MutL C terminal dimerisation domain ASU28_09955 PF05192 MutS domain III ASU28_09955 PF05190 MutS family domain IV ASU28_09955 PF00488 MutS domain V ASU28_09955 PF01624 MutS domain I ASU28_09955 PF05188 MutS domain II ASU28_09960 PF13277 YmdB-like protein ASU28_09965 PF01966 HD domain ASU28_09965 PF12072 Domain of unknown function (DUF3552) ASU28_09965 PF00013 KH domain ASU28_09970 PF00154 recA bacterial DNA recombination protein ASU28_09975 PF00994 Probable molybdopterin binding domain ASU28_09975 PF18146 Damage-inducible protein CinA KH domain ASU28_09975 PF02464 Competence-damaged protein ASU28_09980 PF01066 CDP-alcohol phosphatidyltransferase ASU28_09985 PF13464 Domain of unknown function (DUF4115) ASU28_09990 PF05193 Peptidase M16 inactive domain ASU28_09990 PF00675 Insulinase (Peptidase family M16) ASU28_09995 PF05193 Peptidase M16 inactive domain ASU28_10000 PF00696 Amino acid kinase family ASU28_10000 PF13840 ACT domain ASU28_10005 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASU28_10010 PF00005 ABC transporter ASU28_10015 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_10020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASU28_10025 PF03775 Septum formation inhibitor MinC, C-terminal domain ASU28_10035 PF04085 rod shape-determining protein MreC ASU28_10045 PF04002 RadC-like JAB domain ASU28_10050 PF02875 Mur ligase family, glutamate ligase domain ASU28_10050 PF08245 Mur ligase middle domain ASU28_10055 PF08264 Anticodon-binding domain of tRNA ASU28_10055 PF10458 Valyl tRNA synthetase tRNA binding arm ASU28_10055 PF00133 tRNA synthetases class I (I, L, M and V) ASU28_10060 PF08534 Redoxin ASU28_10065 PF02926 THUMP domain ASU28_10065 PF02568 Thiamine biosynthesis protein (ThiI) ASU28_10070 PF00266 Aminotransferase class-V ASU28_10075 PF06160 Septation ring formation regulator, EzrA ASU28_10080 PF13185 GAF domain ASU28_10085 PF00163 Ribosomal protein S4/S9 N-terminal domain ASU28_10085 PF01479 S4 domain ASU28_10090 PF06335 Protein of unknown function (DUF1054) ASU28_10105 PF01022 Bacterial regulatory protein, arsR family ASU28_10110 PF04262 Glutamate-cysteine ligase ASU28_10110 PF18419 ATP-grasp-like domain ASU28_10115 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASU28_10115 PF12002 MgsA AAA+ ATPase C terminal ASU28_10115 PF16193 AAA C-terminal domain ASU28_10125 PF00582 Universal stress protein family ASU28_10145 PF07478 D-ala D-ala ligase C-terminus ASU28_10145 PF01820 D-ala D-ala ligase N-terminus ASU28_10150 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_10150 PF00107 Zinc-binding dehydrogenase ASU28_10160 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASU28_10160 PF00056 lactate/malate dehydrogenase, NAD binding domain ASU28_10165 PF03180 NLPA lipoprotein ASU28_10170 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_10175 PF00005 ABC transporter ASU28_10175 PF09383 NIL domain ASU28_10180 PF01597 Glycine cleavage H-protein ASU28_10185 PF01098 Cell cycle protein ASU28_10195 PF01809 Putative membrane protein insertion efficiency factor ASU28_10210 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASU28_10215 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ASU28_10215 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ASU28_10220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASU28_10220 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASU28_10225 PF00231 ATP synthase ASU28_10230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASU28_10230 PF00306 ATP synthase alpha/beta chain, C terminal domain ASU28_10230 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASU28_10235 PF00213 ATP synthase delta (OSCP) subunit ASU28_10240 PF00430 ATP synthase B/B' CF(0) ASU28_10245 PF00137 ATP synthase subunit C ASU28_10250 PF00119 ATP synthase A chain ASU28_10255 PF00860 Permease family ASU28_10265 PF00464 Serine hydroxymethyltransferase ASU28_10270 PF01300 Telomere recombination ASU28_10270 PF03481 Putative GTP-binding controlling metal-binding ASU28_10275 PF17827 PrmC N-terminal domain ASU28_10275 PF05175 Methyltransferase small domain ASU28_10280 PF00472 RF-1 domain ASU28_10280 PF03462 PCRF domain ASU28_10285 PF00265 Thymidine kinase ASU28_10290 PF08245 Mur ligase middle domain ASU28_10290 PF08353 Domain of unknown function (DUF1727) ASU28_10295 PF07685 CobB/CobQ-like glutamine amidotransferase domain ASU28_10300 PF01238 Phosphomannose isomerase type I ASU28_10305 PF00144 Beta-lactamase ASU28_10315 PF01063 Amino-transferase class IV ASU28_10330 PF00664 ABC transporter transmembrane region ASU28_10330 PF00005 ABC transporter ASU28_10335 PF00005 ABC transporter ASU28_10335 PF00664 ABC transporter transmembrane region ASU28_10345 PF01522 Polysaccharide deacetylase ASU28_10470 PF04327 Cysteine protease Prp ASU28_10580 PF01381 Helix-turn-helix ASU28_10620 PF02899 Phage integrase, N-terminal SAM-like domain ASU28_10620 PF00589 Phage integrase family ASU28_10660 PF06458 MucBP domain ASU28_10665 PF00005 ABC transporter ASU28_10665 PF00664 ABC transporter transmembrane region ASU28_10675 PF00005 ABC transporter ASU28_10675 PF02687 FtsX-like permease family ASU28_10675 PF12704 MacB-like periplasmic core domain ASU28_10685 PF00342 Phosphoglucose isomerase ASU28_10690 PF06800 Sugar transport protein ASU28_10695 PF17785 PUA-like domain ASU28_10695 PF10672 S-adenosylmethionine-dependent methyltransferase ASU28_10700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_10700 PF00672 HAMP domain ASU28_10700 PF00512 His Kinase A (phospho-acceptor) domain ASU28_10705 PF00486 Transcriptional regulatory protein, C terminal ASU28_10705 PF00072 Response regulator receiver domain ASU28_10710 PF05167 Uncharacterised ACR (DUF711) ASU28_10720 PF00892 EamA-like transporter family ASU28_10735 PF07690 Major Facilitator Superfamily ASU28_10750 PF00877 NlpC/P60 family ASU28_10755 PF01037 Lrp/AsnC ligand binding domain ASU28_10770 PF00990 Diguanylate cyclase, GGDEF domain ASU28_10775 PF12848 ABC transporter ASU28_10775 PF00005 ABC transporter ASU28_10785 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ASU28_10795 PF02378 Phosphotransferase system, EIIC ASU28_10795 PF00367 phosphotransferase system, EIIB ASU28_10795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_10800 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASU28_10800 PF02558 Ketopantoate reductase PanE/ApbA ASU28_10805 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_10810 PF03447 Homoserine dehydrogenase, NAD binding domain ASU28_10810 PF00742 Homoserine dehydrogenase ASU28_10815 PF01053 Cys/Met metabolism PLP-dependent enzyme ASU28_10820 PF04204 Homoserine O-succinyltransferase ASU28_10830 PF02653 Branched-chain amino acid transport system / permease component ASU28_10835 PF00005 ABC transporter ASU28_10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_10840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_10845 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ASU28_10845 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASU28_10850 PF03741 Integral membrane protein TerC family ASU28_10855 PF12464 Maltose acetyltransferase ASU28_10855 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_10865 PF00155 Aminotransferase class I and II ASU28_10870 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ASU28_10875 PF01502 Phosphoribosyl-AMP cyclohydrolase ASU28_10880 PF00977 Histidine biosynthesis protein ASU28_10885 PF00977 Histidine biosynthesis protein ASU28_10890 PF00117 Glutamine amidotransferase class-I ASU28_10895 PF00475 Imidazoleglycerol-phosphate dehydratase ASU28_10900 PF00815 Histidinol dehydrogenase ASU28_10905 PF01634 ATP phosphoribosyltransferase ASU28_10910 PF13393 Histidyl-tRNA synthetase ASU28_10915 PF02811 PHP domain ASU28_10935 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASU28_10935 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASU28_10940 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ASU28_10950 PF06736 Protein of unknown function (DUF1211) ASU28_10965 PF00884 Sulfatase ASU28_10970 PF03009 Glycerophosphoryl diester phosphodiesterase family ASU28_10975 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_10990 PF03976 Polyphosphate kinase 2 (PPK2) ASU28_10995 PF00881 Nitroreductase family ASU28_11000 PF01156 Inosine-uridine preferring nucleoside hydrolase ASU28_11005 PF00075 RNase H ASU28_11010 PF06800 Sugar transport protein ASU28_11015 PF00480 ROK family ASU28_11020 PF04055 Radical SAM superfamily ASU28_11025 PF00455 DeoR C terminal sensor domain ASU28_11025 PF08220 DeoR-like helix-turn-helix domain ASU28_11030 PF01228 Glycine radical ASU28_11030 PF02901 Pyruvate formate lyase-like ASU28_11035 PF04198 Putative sugar-binding domain ASU28_11035 PF13936 Helix-turn-helix domain ASU28_11040 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASU28_11050 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASU28_11050 PF00356 Bacterial regulatory proteins, lacI family ASU28_11055 PF01418 Helix-turn-helix domain, rpiR family ASU28_11055 PF01380 SIS domain ASU28_11060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASU28_11060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_11065 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_11065 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASU28_11070 PF00999 Sodium/hydrogen exchanger family ASU28_11075 PF02779 Transketolase, pyrimidine binding domain ASU28_11075 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ASU28_11075 PF02780 Transketolase, C-terminal domain ASU28_11080 PF00857 Isochorismatase family ASU28_11090 PF00005 ABC transporter ASU28_11095 PF00392 Bacterial regulatory proteins, gntR family ASU28_11095 PF07702 UTRA domain ASU28_11130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_11130 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_11130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_11140 PF00326 Prolyl oligopeptidase family ASU28_11145 PF00085 Thioredoxin ASU28_11150 PF01053 Cys/Met metabolism PLP-dependent enzyme ASU28_11180 PF10437 Bacterial lipoate protein ligase C-terminus ASU28_11180 PF03099 Biotin/lipoate A/B protein ligase family ASU28_11185 PF13457 GW (Gly-Tryp) dipeptide domain ASU28_11185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ASU28_11190 PF00582 Universal stress protein family ASU28_11195 PF00849 RNA pseudouridylate synthase ASU28_11195 PF01479 S4 domain ASU28_11205 PF00534 Glycosyl transferases group 1 ASU28_11210 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ASU28_11210 PF09363 XFP C-terminal domain ASU28_11210 PF09364 XFP N-terminal domain ASU28_11215 PF00756 Putative esterase ASU28_11220 PF07702 UTRA domain ASU28_11220 PF00392 Bacterial regulatory proteins, gntR family ASU28_11225 PF04073 Aminoacyl-tRNA editing domain ASU28_11235 PF01966 HD domain ASU28_11265 PF00571 CBS domain ASU28_11265 PF03471 Transporter associated domain ASU28_11265 PF01595 Cyclin M transmembrane N-terminal domain ASU28_11270 PF07972 NrdI Flavodoxin like ASU28_11275 PF00999 Sodium/hydrogen exchanger family ASU28_11280 PF07690 Major Facilitator Superfamily ASU28_11285 PF07739 TipAS antibiotic-recognition domain ASU28_11285 PF13411 MerR HTH family regulatory protein ASU28_11290 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_11290 PF00107 Zinc-binding dehydrogenase ASU28_11300 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ASU28_11300 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ASU28_11305 PF00155 Aminotransferase class I and II ASU28_11305 PF00392 Bacterial regulatory proteins, gntR family ASU28_11310 PF00155 Aminotransferase class I and II ASU28_11315 PF00701 Dihydrodipicolinate synthetase family ASU28_11325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_11325 PF03466 LysR substrate binding domain ASU28_11330 PF13460 NAD(P)H-binding ASU28_11340 PF13361 UvrD-like helicase C-terminal domain ASU28_11340 PF00580 UvrD/REP helicase N-terminal domain ASU28_11340 PF12705 PD-(D/E)XK nuclease superfamily ASU28_11345 PF12705 PD-(D/E)XK nuclease superfamily ASU28_11355 PF00156 Phosphoribosyl transferase domain ASU28_11360 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ASU28_11365 PF01180 Dihydroorotate dehydrogenase ASU28_11370 PF02142 MGS-like domain ASU28_11370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASU28_11370 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASU28_11375 PF00117 Glutamine amidotransferase class-I ASU28_11375 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ASU28_11380 PF01979 Amidohydrolase family ASU28_11385 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASU28_11385 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASU28_11390 PF00156 Phosphoribosyl transferase domain ASU28_11395 PF13556 PucR C-terminal helix-turn-helix domain ASU28_11400 PF00860 Permease family ASU28_11405 PF00860 Permease family ASU28_11425 PF00535 Glycosyl transferase family 2 ASU28_11435 PF02843 Phosphoribosylglycinamide synthetase, C domain ASU28_11435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ASU28_11435 PF02844 Phosphoribosylglycinamide synthetase, N domain ASU28_11440 PF01808 AICARFT/IMPCHase bienzyme ASU28_11440 PF02142 MGS-like domain ASU28_11445 PF00551 Formyl transferase ASU28_11450 PF02769 AIR synthase related protein, C-terminal domain ASU28_11450 PF00586 AIR synthase related protein, N-terminal domain ASU28_11455 PF13537 Glutamine amidotransferase domain ASU28_11455 PF00156 Phosphoribosyl transferase domain ASU28_11460 PF02769 AIR synthase related protein, C-terminal domain ASU28_11460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ASU28_11460 PF00586 AIR synthase related protein, N-terminal domain ASU28_11470 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ASU28_11475 PF01259 SAICAR synthetase ASU28_11480 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ASU28_11480 PF02222 ATP-grasp domain ASU28_11485 PF00731 AIR carboxylase ASU28_11490 PF00890 FAD binding domain ASU28_11490 PF04205 FMN-binding domain ASU28_11490 PF03358 NADPH-dependent FMN reductase ASU28_11495 PF04205 FMN-binding domain ASU28_11495 PF03358 NADPH-dependent FMN reductase ASU28_11495 PF00890 FAD binding domain ASU28_11500 PF10437 Bacterial lipoate protein ligase C-terminus ASU28_11500 PF03099 Biotin/lipoate A/B protein ligase family ASU28_11505 PF13350 Tyrosine phosphatase family ASU28_11520 PF00710 Asparaginase, N-terminal ASU28_11520 PF17763 Glutaminase/Asparaginase C-terminal domain ASU28_11525 PF00005 ABC transporter ASU28_11540 PF00392 Bacterial regulatory proteins, gntR family ASU28_11545 PF00005 ABC transporter ASU28_11555 PF00582 Universal stress protein family ASU28_11565 PF04138 GtrA-like protein ASU28_11585 PF00155 Aminotransferase class I and II ASU28_11610 PF00128 Alpha amylase, catalytic domain ASU28_11610 PF02903 Alpha amylase, N-terminal ig-like domain ASU28_11615 PF00291 Pyridoxal-phosphate dependent enzyme ASU28_11615 PF14821 Threonine synthase N terminus ASU28_11630 PF12464 Maltose acetyltransferase ASU28_11630 PF00132 Bacterial transferase hexapeptide (six repeats) ASU28_11635 PF00293 NUDIX domain ASU28_11675 PF02829 3H domain ASU28_11675 PF08279 HTH domain ASU28_11680 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ASU28_11680 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ASU28_11680 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ASU28_11685 PF00440 Bacterial regulatory proteins, tetR family ASU28_11695 PF00005 ABC transporter ASU28_11700 PF03358 NADPH-dependent FMN reductase ASU28_11705 PF07690 Major Facilitator Superfamily ASU28_11710 PF01047 MarR family ASU28_11715 PF00291 Pyridoxal-phosphate dependent enzyme ASU28_11720 PF00232 Glycosyl hydrolase family 1 ASU28_11725 PF00232 Glycosyl hydrolase family 1 ASU28_11730 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ASU28_11735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_11740 PF07702 UTRA domain ASU28_11740 PF00392 Bacterial regulatory proteins, gntR family ASU28_11745 PF00535 Glycosyl transferase family 2 ASU28_11750 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_11765 PF02558 Ketopantoate reductase PanE/ApbA ASU28_11765 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASU28_11770 PF00892 EamA-like transporter family ASU28_11775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASU28_11790 PF00258 Flavodoxin ASU28_11820 PF01022 Bacterial regulatory protein, arsR family ASU28_11825 PF01223 DNA/RNA non-specific endonuclease ASU28_11850 PF00005 ABC transporter ASU28_11850 PF12848 ABC transporter ASU28_11865 PF17760 UvrA interaction domain ASU28_11865 PF00005 ABC transporter ASU28_11865 PF17755 UvrA DNA-binding domain ASU28_11880 PF11700 Vacuole effluxer Atg22 like ASU28_11915 PF00990 Diguanylate cyclase, GGDEF domain ASU28_11920 PF00563 EAL domain ASU28_11920 PF12792 CSS motif domain associated with EAL ASU28_11930 PF03477 ATP cone domain ASU28_11930 PF13597 Anaerobic ribonucleoside-triphosphate reductase ASU28_11940 PF01327 Polypeptide deformylase ASU28_11945 PF02424 ApbE family ASU28_11950 PF01207 Dihydrouridine synthase (Dus) ASU28_11965 PF03466 LysR substrate binding domain ASU28_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_11970 PF00939 Sodium:sulfate symporter transmembrane region ASU28_11975 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ASU28_12010 PF00892 EamA-like transporter family ASU28_12040 PF00480 ROK family ASU28_12045 PF08924 Domain of unknown function (DUF1906) ASU28_12045 PF01471 Putative peptidoglycan binding domain ASU28_12055 PF00664 ABC transporter transmembrane region ASU28_12055 PF00005 ABC transporter ASU28_12065 PF00356 Bacterial regulatory proteins, lacI family ASU28_12065 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ASU28_12075 PF00881 Nitroreductase family ASU28_12080 PF02378 Phosphotransferase system, EIIC ASU28_12080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_12080 PF00367 phosphotransferase system, EIIB ASU28_12085 PF00005 ABC transporter ASU28_12090 PF02653 Branched-chain amino acid transport system / permease component ASU28_12105 PF00005 ABC transporter ASU28_12110 PF00005 ABC transporter ASU28_12110 PF12399 Branched-chain amino acid ATP-binding cassette transporter ASU28_12115 PF11862 Domain of unknown function (DUF3382) ASU28_12115 PF02653 Branched-chain amino acid transport system / permease component ASU28_12120 PF02653 Branched-chain amino acid transport system / permease component ASU28_12125 PF13458 Periplasmic binding protein ASU28_12145 PF04138 GtrA-like protein ASU28_12155 PF01381 Helix-turn-helix ASU28_12160 PF01566 Natural resistance-associated macrophage protein ASU28_12180 PF01022 Bacterial regulatory protein, arsR family ASU28_12190 PF00005 ABC transporter ASU28_12190 PF02687 FtsX-like permease family ASU28_12190 PF12704 MacB-like periplasmic core domain ASU28_12225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_12230 PF02378 Phosphotransferase system, EIIC ASU28_12235 PF00232 Glycosyl hydrolase family 1 ASU28_12245 PF13411 MerR HTH family regulatory protein ASU28_12250 PF06737 Transglycosylase-like domain ASU28_12255 PF01464 Transglycosylase SLT domain ASU28_12270 PF01297 Zinc-uptake complex component A periplasmic ASU28_12295 PF11799 impB/mucB/samB family C-terminal domain ASU28_12295 PF11798 IMS family HHH motif ASU28_12295 PF00817 impB/mucB/samB family ASU28_12300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASU28_12300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASU28_12315 PF01638 HxlR-like helix-turn-helix ASU28_12335 PF00005 ABC transporter ASU28_12335 PF00664 ABC transporter transmembrane region ASU28_12340 PF00005 ABC transporter ASU28_12340 PF00664 ABC transporter transmembrane region ASU28_12350 PF01546 Peptidase family M20/M25/M40 ASU28_12350 PF07687 Peptidase dimerisation domain ASU28_12370 PF13520 Amino acid permease ASU28_12380 PF00465 Iron-containing alcohol dehydrogenase ASU28_12385 PF00107 Zinc-binding dehydrogenase ASU28_12385 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_12390 PF00403 Heavy-metal-associated domain ASU28_12415 PF00535 Glycosyl transferase family 2 ASU28_12485 PF13419 Haloacid dehalogenase-like hydrolase ASU28_12500 PF01638 HxlR-like helix-turn-helix ASU28_12505 PF07690 Major Facilitator Superfamily ASU28_12515 PF00072 Response regulator receiver domain ASU28_12515 PF04397 LytTr DNA-binding domain ASU28_12525 PF00440 Bacterial regulatory proteins, tetR family ASU28_12525 PF08359 YsiA-like protein, C-terminal region ASU28_12535 PF00171 Aldehyde dehydrogenase family ASU28_12550 PF01638 HxlR-like helix-turn-helix ASU28_12555 PF00106 short chain dehydrogenase ASU28_12570 PF00248 Aldo/keto reductase family ASU28_12575 PF07690 Major Facilitator Superfamily ASU28_12585 PF01497 Periplasmic binding protein ASU28_12590 PF00005 ABC transporter ASU28_12595 PF01032 FecCD transport family ASU28_12600 PF01032 FecCD transport family ASU28_12605 PF00106 short chain dehydrogenase ASU28_12610 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_12610 PF12464 Maltose acetyltransferase ASU28_12615 PF11975 Family 4 glycosyl hydrolase C-terminal domain ASU28_12615 PF02056 Family 4 glycosyl hydrolase ASU28_12620 PF00356 Bacterial regulatory proteins, lacI family ASU28_12650 PF06458 MucBP domain ASU28_12660 PF00561 alpha/beta hydrolase fold ASU28_12665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_12665 PF03466 LysR substrate binding domain ASU28_12670 PF00999 Sodium/hydrogen exchanger family ASU28_12675 PF00293 NUDIX domain ASU28_12675 PF09297 NADH pyrophosphatase zinc ribbon domain ASU28_12705 PF01209 ubiE/COQ5 methyltransferase family ASU28_12715 PF00300 Histidine phosphatase superfamily (branch 1) ASU28_12720 PF01594 AI-2E family transporter ASU28_12725 PF00480 ROK family ASU28_12745 PF00440 Bacterial regulatory proteins, tetR family ASU28_12750 PF00106 short chain dehydrogenase ASU28_12755 PF00069 Protein kinase domain ASU28_12755 PF03793 PASTA domain ASU28_12790 PF00583 Acetyltransferase (GNAT) family ASU28_12795 PF01047 MarR family ASU28_12805 PF00768 D-alanyl-D-alanine carboxypeptidase ASU28_12805 PF07943 Penicillin-binding protein 5, C-terminal domain ASU28_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_12810 PF00512 His Kinase A (phospho-acceptor) domain ASU28_12815 PF00072 Response regulator receiver domain ASU28_12815 PF00486 Transcriptional regulatory protein, C terminal ASU28_12825 PF00571 CBS domain ASU28_12825 PF00478 IMP dehydrogenase / GMP reductase domain ASU28_12835 PF01926 50S ribosome-binding GTPase ASU28_12835 PF06071 Protein of unknown function (DUF933) ASU28_12840 PF06107 Bacterial protein of unknown function (DUF951) ASU28_12845 PF17762 HTH domain found in ParB protein ASU28_12845 PF02195 ParB-like nuclease domain ASU28_12850 PF13614 AAA domain ASU28_12855 PF17762 HTH domain found in ParB protein ASU28_12855 PF02195 ParB-like nuclease domain ASU28_12860 PF02527 rRNA small subunit methyltransferase G ASU28_12865 PF07662 Na+ dependent nucleoside transporter C-terminus ASU28_12865 PF01773 Na+ dependent nucleoside transporter N-terminus ASU28_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_12885 PF03466 LysR substrate binding domain ASU28_12890 PF00155 Aminotransferase class I and II ASU28_12895 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASU28_12900 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_12905 PF00005 ABC transporter ASU28_12910 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASU28_12940 PF00367 phosphotransferase system, EIIB ASU28_12940 PF02378 Phosphotransferase system, EIIC ASU28_12940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_12945 PF16657 Maltogenic Amylase, C-terminal domain ASU28_12945 PF00128 Alpha amylase, catalytic domain ASU28_12950 PF00356 Bacterial regulatory proteins, lacI family ASU28_12960 PF03649 Uncharacterised protein family (UPF0014) ASU28_12965 PF00005 ABC transporter ASU28_12970 PF01938 TRAM domain ASU28_12970 PF05958 tRNA (Uracil-5-)-methyltransferase ASU28_12985 PF00367 phosphotransferase system, EIIB ASU28_12985 PF02378 Phosphotransferase system, EIIC ASU28_12985 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_13000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_13000 PF03466 LysR substrate binding domain ASU28_13025 PF02378 Phosphotransferase system, EIIC ASU28_13025 PF00367 phosphotransferase system, EIIB ASU28_13025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_13040 PF03358 NADPH-dependent FMN reductase ASU28_13040 PF04205 FMN-binding domain ASU28_13040 PF00890 FAD binding domain ASU28_13055 PF01475 Ferric uptake regulator family ASU28_13060 PF08951 Enterocin A Immunity ASU28_13075 PF13302 Acetyltransferase (GNAT) domain ASU28_13080 PF03788 LrgA family ASU28_13085 PF04172 LrgB-like family ASU28_13090 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_13095 PF04298 Putative neutral zinc metallopeptidase ASU28_13100 PF01593 Flavin containing amine oxidoreductase ASU28_13115 PF02595 Glycerate kinase family ASU28_13120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_13120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_13130 PF10397 Adenylosuccinate lyase C-terminus ASU28_13130 PF00206 Lyase ASU28_13135 PF00709 Adenylosuccinate synthetase ASU28_13140 PF00478 IMP dehydrogenase / GMP reductase domain ASU28_13145 PF13350 Tyrosine phosphatase family ASU28_13150 PF13396 Phospholipase_D-nuclease N-terminal ASU28_13150 PF13091 PLD-like domain ASU28_13155 PF13520 Amino acid permease ASU28_13160 PF02705 K+ potassium transporter ASU28_13175 PF01471 Putative peptidoglycan binding domain ASU28_13175 PF08924 Domain of unknown function (DUF1906) ASU28_13180 PF01594 AI-2E family transporter ASU28_13185 PF01717 Cobalamin-independent synthase, Catalytic domain ASU28_13195 PF00893 Small Multidrug Resistance protein ASU28_13200 PF03006 Haemolysin-III related ASU28_13205 PF01022 Bacterial regulatory protein, arsR family ASU28_13210 PF01545 Cation efflux family ASU28_13215 PF00528 Binding-protein-dependent transport system inner membrane component ASU28_13230 PF00144 Beta-lactamase ASU28_13235 PF02901 Pyruvate formate lyase-like ASU28_13235 PF01228 Glycine radical ASU28_13240 PF04055 Radical SAM superfamily ASU28_13245 PF01883 Iron-sulfur cluster assembly protein ASU28_13250 PF00248 Aldo/keto reductase family ASU28_13275 PF02028 BCCT, betaine/carnitine/choline family transporter ASU28_13280 PF00403 Heavy-metal-associated domain ASU28_13290 PF04237 YjbR ASU28_13295 PF13382 Adenine deaminase C-terminal domain ASU28_13295 PF01979 Amidohydrolase family ASU28_13300 PF01380 SIS domain ASU28_13310 PF03553 Na+/H+ antiporter family ASU28_13315 PF00324 Amino acid permease ASU28_13325 PF04608 Phosphatidylglycerophosphatase A ASU28_13330 PF03960 ArsC family ASU28_13335 PF04343 Protein of unknown function, DUF488 ASU28_13345 PF00730 HhH-GPD superfamily base excision DNA repair protein ASU28_13345 PF14815 NUDIX domain ASU28_13360 PF00011 Hsp20/alpha crystallin family ASU28_13380 PF00892 EamA-like transporter family ASU28_13400 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ASU28_13410 PF03965 Penicillinase repressor ASU28_13425 PF07690 Major Facilitator Superfamily ASU28_13520 PF00083 Sugar (and other) transporter ASU28_13520 PF07690 Major Facilitator Superfamily ASU28_13540 PF00689 Cation transporting ATPase, C-terminus ASU28_13540 PF00690 Cation transporter/ATPase, N-terminus ASU28_13545 PF02872 5'-nucleotidase, C-terminal domain ASU28_13545 PF00149 Calcineurin-like phosphoesterase ASU28_13560 PF00248 Aldo/keto reductase family ASU28_13570 PF02673 Bacitracin resistance protein BacA ASU28_13575 PF01661 Macro domain ASU28_13610 PF12833 Helix-turn-helix domain ASU28_13635 PF00282 Pyridoxal-dependent decarboxylase conserved domain ASU28_13640 PF00877 NlpC/P60 family ASU28_13685 PF01209 ubiE/COQ5 methyltransferase family ASU28_13700 PF00403 Heavy-metal-associated domain ASU28_13735 PF00403 Heavy-metal-associated domain ASU28_13740 PF00403 Heavy-metal-associated domain ASU28_13750 PF00230 Major intrinsic protein ASU28_13755 PF00085 Thioredoxin ASU28_13760 PF02583 Metal-sensitive transcriptional repressor ASU28_13780 PF00027 Cyclic nucleotide-binding domain ASU28_13780 PF13545 Crp-like helix-turn-helix domain ASU28_13785 PF05649 Peptidase family M13 ASU28_13785 PF01431 Peptidase family M13 ASU28_13795 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_13795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASU28_13845 PF00230 Major intrinsic protein ASU28_13850 PF03109 ABC1 family ASU28_13855 PF05525 Branched-chain amino acid transport protein ASU28_13860 PF02449 Beta-galactosidase ASU28_13860 PF08532 Beta-galactosidase trimerisation domain ASU28_13860 PF08533 Beta-galactosidase C-terminal domain ASU28_13865 PF16874 Glycosyl hydrolase family 36 C-terminal domain ASU28_13865 PF16875 Glycosyl hydrolase family 36 N-terminal domain ASU28_13875 PF02378 Phosphotransferase system, EIIC ASU28_13880 PF00356 Bacterial regulatory proteins, lacI family ASU28_13890 PF07690 Major Facilitator Superfamily ASU28_13910 PF02661 Fic/DOC family ASU28_13910 PF18543 Intracellular delivery domain ASU28_13915 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA ASU28_13920 PF00356 Bacterial regulatory proteins, lacI family ASU28_13925 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ASU28_13925 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ASU28_13930 PF16363 GDP-mannose 4,6 dehydratase ASU28_13935 PF10509 Galactokinase galactose-binding signature ASU28_13935 PF08544 GHMP kinases C terminal ASU28_13935 PF00288 GHMP kinases N terminal domain ASU28_13940 PF02837 Glycosyl hydrolases family 2, sugar binding domain ASU28_13940 PF00703 Glycosyl hydrolases family 2 ASU28_13940 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ASU28_13945 PF02929 Beta galactosidase small chain ASU28_13950 PF16875 Glycosyl hydrolase family 36 N-terminal domain ASU28_13950 PF16874 Glycosyl hydrolase family 36 C-terminal domain ASU28_13955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_13960 PF01263 Aldose 1-epimerase ASU28_13965 PF00356 Bacterial regulatory proteins, lacI family ASU28_13970 PF00083 Sugar (and other) transporter ASU28_13975 PF01263 Aldose 1-epimerase ASU28_13980 PF00293 NUDIX domain ASU28_13985 PF13181 Tetratricopeptide repeat ASU28_13985 PF17128 Domain of unknown function (DUF5107) ASU28_13990 PF12833 Helix-turn-helix domain ASU28_13990 PF02311 AraC-like ligand binding domain ASU28_13995 PF00248 Aldo/keto reductase family ASU28_14005 PF00890 FAD binding domain ASU28_14005 PF03358 NADPH-dependent FMN reductase ASU28_14005 PF04205 FMN-binding domain ASU28_14010 PF02424 ApbE family ASU28_14015 PF01487 Type I 3-dehydroquinase ASU28_14020 PF07690 Major Facilitator Superfamily ASU28_14025 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ASU28_14025 PF08501 Shikimate dehydrogenase substrate binding domain ASU28_14030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASU28_14030 PF03466 LysR substrate binding domain ASU28_14035 PF07690 Major Facilitator Superfamily ASU28_14045 PF12697 Alpha/beta hydrolase family ASU28_14050 PF07702 UTRA domain ASU28_14050 PF00392 Bacterial regulatory proteins, gntR family ASU28_14055 PF02378 Phosphotransferase system, EIIC ASU28_14060 PF13580 SIS domain ASU28_14065 PF01869 BadF/BadG/BcrA/BcrD ATPase family ASU28_14080 PF02954 Bacterial regulatory protein, Fis family ASU28_14080 PF00072 Response regulator receiver domain ASU28_14080 PF00158 Sigma-54 interaction domain ASU28_14085 PF02743 Cache domain ASU28_14085 PF06580 Histidine kinase ASU28_14085 PF00672 HAMP domain ASU28_14085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASU28_14090 PF04205 FMN-binding domain ASU28_14090 PF00890 FAD binding domain ASU28_14095 PF00232 Glycosyl hydrolase family 1 ASU28_14100 PF00232 Glycosyl hydrolase family 1 ASU28_14105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASU28_14105 PF00367 phosphotransferase system, EIIB ASU28_14105 PF02378 Phosphotransferase system, EIIC ASU28_14115 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASU28_14115 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASU28_14115 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASU28_14120 PF00356 Bacterial regulatory proteins, lacI family ASU28_14130 PF16338 Domain of unknown function (DUF4968) ASU28_14130 PF17137 Domain of unknown function (DUF5110) ASU28_14130 PF13802 Galactose mutarotase-like ASU28_14130 PF01055 Glycosyl hydrolases family 31 ASU28_14140 PF02779 Transketolase, pyrimidine binding domain ASU28_14140 PF00456 Transketolase, thiamine diphosphate binding domain ASU28_14140 PF02780 Transketolase, C-terminal domain ASU28_14145 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASU28_14150 PF00834 Ribulose-phosphate 3 epimerase family ASU28_14155 PF02378 Phosphotransferase system, EIIC ASU28_14155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_14160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_14165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASU28_14175 PF05043 Mga helix-turn-helix domain ASU28_14175 PF00874 PRD domain ASU28_14175 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASU28_14175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_14175 PF08279 HTH domain ASU28_14180 PF00456 Transketolase, thiamine diphosphate binding domain ASU28_14180 PF02780 Transketolase, C-terminal domain ASU28_14180 PF02779 Transketolase, pyrimidine binding domain ASU28_14185 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASU28_14190 PF03611 PTS system sugar-specific permease component ASU28_14205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASU28_14205 PF00874 PRD domain ASU28_14205 PF05043 Mga helix-turn-helix domain ASU28_14205 PF08279 HTH domain ASU28_14205 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_14215 PF00107 Zinc-binding dehydrogenase ASU28_14215 PF08240 Alcohol dehydrogenase GroES-like domain ASU28_14220 PF03611 PTS system sugar-specific permease component ASU28_14225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASU28_14235 PF00455 DeoR C terminal sensor domain ASU28_14235 PF08220 DeoR-like helix-turn-helix domain ASU28_14240 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ASU28_14240 PF09363 XFP C-terminal domain ASU28_14240 PF09364 XFP N-terminal domain ASU28_14250 PF12464 Maltose acetyltransferase ASU28_14250 PF14602 Hexapeptide repeat of succinyl-transferase ASU28_14255 PF02610 L-arabinose isomerase ASU28_14255 PF11762 L-arabinose isomerase C-terminal domain ASU28_14260 PF00596 Class II Aldolase and Adducin N-terminal domain ASU28_14270 PF00083 Sugar (and other) transporter ASU28_14275 PF00392 Bacterial regulatory proteins, gntR family ASU28_14280 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ASU28_14285 PF03960 ArsC family ASU28_14290 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASU28_14290 PF14759 Reductase C-terminal ASU28_14305 PF04226 Transglycosylase associated protein ASU28_14310 PF06628 Catalase-related immune-responsive ASU28_14310 PF00199 Catalase ASU28_14315 PF03960 ArsC family ASU28_14320 PF04397 LytTr DNA-binding domain ASU28_14320 PF00072 Response regulator receiver domain ASU28_14335 PF04647 Accessory gene regulator B ASU28_14340 PF17871 AAA lid domain ASU28_14340 PF10431 C-terminal, D2-small domain, of ClpB protein ASU28_14340 PF00004 ATPase family associated with various cellular activities (AAA) ASU28_14340 PF07724 AAA domain (Cdc48 subfamily) ASU28_14350 PF01070 FMN-dependent dehydrogenase ASU28_14355 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_14355 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_14355 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_14360 PF02082 Transcriptional regulator ASU28_14365 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASU28_14365 PF00205 Thiamine pyrophosphate enzyme, central domain ASU28_14365 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASU28_14375 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ASU28_14375 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ASU28_14380 PF03608 PTS system enzyme II sorbitol-specific factor ASU28_14395 PF00106 short chain dehydrogenase ASU28_14400 PF06800 Sugar transport protein ASU28_14405 PF05025 RbsD / FucU transport protein family ASU28_14410 PF00294 pfkB family carbohydrate kinase ASU28_14410 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASU28_14415 PF00356 Bacterial regulatory proteins, lacI family ASU28_14420 PF00465 Iron-containing alcohol dehydrogenase ASU28_14420 PF00171 Aldehyde dehydrogenase family ASU28_14430 PF10400 Virulence activator alpha C-term ASU28_14430 PF03551 Transcriptional regulator PadR-like family ASU28_14435 PF05870 Phenolic acid decarboxylase (PAD) ASU28_14450 PF02645 Uncharacterised protein, DegV family COG1307 ASU28_14460 PF03051 Peptidase C1-like family ASU28_14465 PF10502 Signal peptidase, peptidase S26 ASU28_14490 PF01134 Glucose inhibited division protein A ASU28_14490 PF13932 GidA associated domain ASU28_14495 PF01926 50S ribosome-binding GTPase ASU28_14495 PF12631 MnmE helical domain ASU28_14495 PF10396 GTP-binding protein TrmE N-terminus ASU28_14505 PF02096 60Kd inner membrane protein ASU28_14510 PF00825 Ribonuclease P