locus-tag class description CO218_00005 PF13520 Amino acid permease CO218_00015 PF17126 RsmF rRNA methyltransferase first C-terminal domain CO218_00015 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CO218_00015 PF01189 16S rRNA methyltransferase RsmB/F CO218_00030 PF03636 Glycosyl hydrolase family 65, N-terminal domain CO218_00030 PF03632 Glycosyl hydrolase family 65 central catalytic domain CO218_00030 PF03633 Glycosyl hydrolase family 65, C-terminal domain CO218_00035 PF01263 Aldose 1-epimerase CO218_00040 PF01070 FMN-dependent dehydrogenase CO218_00045 PF08544 GHMP kinases C terminal CO218_00045 PF00288 GHMP kinases N terminal domain CO218_00055 PF00288 GHMP kinases N terminal domain CO218_00065 PF00929 Exonuclease CO218_00065 PF04851 Type III restriction enzyme, res subunit CO218_00065 PF13307 Helicase C-terminal domain CO218_00075 PF00155 Aminotransferase class I and II CO218_00080 PF00152 tRNA synthetases class II (D, K and N) CO218_00080 PF01336 OB-fold nucleic acid binding domain CO218_00095 PF00005 ABC transporter CO218_00095 PF09383 NIL domain CO218_00100 PF00528 Binding-protein-dependent transport system inner membrane component CO218_00105 PF03180 NLPA lipoprotein CO218_00125 PF00005 ABC transporter CO218_00125 PF08402 TOBE domain CO218_00130 PF00905 Penicillin binding protein transpeptidase domain CO218_00130 PF00912 Transglycosylase CO218_00135 PF03838 Recombination protein U CO218_00140 PF06908 YspA SLOG family CO218_00145 PF05103 DivIVA protein CO218_00155 PF02926 THUMP domain CO218_00155 PF01170 Putative RNA methylase family UPF0020 CO218_00160 PF00326 Prolyl oligopeptidase family CO218_00215 PF00872 Transposase, Mutator family CO218_00235 PF00005 ABC transporter CO218_00250 PF01266 FAD dependent oxidoreductase CO218_00265 PF01268 Formate--tetrahydrofolate ligase CO218_00270 PF01252 Signal peptidase (SPase) II CO218_00275 PF01479 S4 domain CO218_00275 PF00849 RNA pseudouridylate synthase CO218_00280 PF00156 Phosphoribosyl transferase domain CO218_00285 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CO218_00285 PF00117 Glutamine amidotransferase class-I CO218_00290 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_00290 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CO218_00290 PF02142 MGS-like domain CO218_00300 PF00300 Histidine phosphatase superfamily (branch 1) CO218_00305 PF08818 Domain of unknown function (DU1801) CO218_00330 PF00005 ABC transporter CO218_00335 PF12679 ABC-2 family transporter protein CO218_00340 PF05670 NFACT protein RNA binding domain CO218_00350 PF02645 Uncharacterised protein, DegV family COG1307 CO218_00410 PF00324 Amino acid permease CO218_00440 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CO218_00445 PF08240 Alcohol dehydrogenase GroES-like domain CO218_00445 PF16912 Glucose dehydrogenase C-terminus CO218_00450 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CO218_00455 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CO218_00460 PF13673 Acetyltransferase (GNAT) domain CO218_00465 PF01047 MarR family CO218_00470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_00470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_00485 PF13333 Integrase core domain CO218_00485 PF00665 Integrase core domain CO218_00485 PF13276 HTH-like domain CO218_00510 PF01625 Peptide methionine sulfoxide reductase CO218_00515 PF01641 SelR domain CO218_00520 PF01368 DHH family CO218_00520 PF02833 DHHA2 domain CO218_00525 PF03466 LysR substrate binding domain CO218_00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_00530 PF00521 DNA gyrase/topoisomerase IV, subunit A CO218_00530 PF03989 DNA gyrase C-terminal domain, beta-propeller CO218_00535 PF00204 DNA gyrase B CO218_00535 PF00986 DNA gyrase B subunit, carboxyl terminus CO218_00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_00535 PF01751 Toprim domain CO218_00540 PF02660 Glycerol-3-phosphate acyltransferase CO218_00545 PF01263 Aldose 1-epimerase CO218_00550 PF00004 ATPase family associated with various cellular activities (AAA) CO218_00550 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_00550 PF07724 AAA domain (Cdc48 subfamily) CO218_00555 PF00227 Proteasome subunit CO218_00560 PF02899 Phage integrase, N-terminal SAM-like domain CO218_00560 PF00589 Phage integrase family CO218_00565 PF01134 Glucose inhibited division protein A CO218_00570 PF01131 DNA topoisomerase CO218_00570 PF01751 Toprim domain CO218_00570 PF01396 Topoisomerase DNA binding C4 zinc finger CO218_00575 PF18255 DNA processing protein A sterile alpha motif domain CO218_00575 PF02481 DNA recombination-mediator protein A CO218_00580 PF01351 Ribonuclease HII CO218_00585 PF01926 50S ribosome-binding GTPase CO218_00595 PF01717 Cobalamin-independent synthase, Catalytic domain CO218_00600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_00600 PF03466 LysR substrate binding domain CO218_00615 PF07690 Major Facilitator Superfamily CO218_00620 PF17820 PDZ domain CO218_00620 PF03572 Peptidase family S41 CO218_00620 PF01471 Putative peptidoglycan binding domain CO218_00625 PF06855 YozE SAM-like fold CO218_00630 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) CO218_00635 PF13472 GDSL-like Lipase/Acylhydrolase family CO218_00645 PF00186 Dihydrofolate reductase CO218_00650 PF00303 Thymidylate synthase CO218_00655 PF12848 ABC transporter CO218_00655 PF00005 ABC transporter CO218_00655 PF16326 ABC transporter C-terminal domain CO218_00665 PF01743 Poly A polymerase head domain CO218_00665 PF12627 Probable RNA and SrmB- binding site of polymerase A CO218_00665 PF13735 tRNA nucleotidyltransferase domain 2 putative CO218_00670 PF01113 Dihydrodipicolinate reductase, N-terminus CO218_00670 PF05173 Dihydrodipicolinate reductase, C-terminus CO218_00685 PF00216 Bacterial DNA-binding protein CO218_00695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CO218_00695 PF01926 50S ribosome-binding GTPase CO218_00700 PF00575 S1 RNA binding domain CO218_00705 PF02224 Cytidylate kinase CO218_00715 PF00271 Helicase conserved C-terminal domain CO218_00715 PF00270 DEAD/DEAH box helicase CO218_00730 PF01479 S4 domain CO218_00730 PF00849 RNA pseudouridylate synthase CO218_00735 PF04079 Segregation and condensation complex subunit ScpB CO218_00740 PF02616 Segregation and condensation protein ScpA CO218_00745 PF00583 Acetyltransferase (GNAT) family CO218_00750 PF00589 Phage integrase family CO218_00750 PF02899 Phage integrase, N-terminal SAM-like domain CO218_00755 PF13509 S1 domain CO218_00755 PF17783 CvfB-like winged helix domain CO218_00760 PF04284 Protein of unknown function (DUF441) CO218_00770 PF02887 Pyruvate kinase, alpha/beta domain CO218_00770 PF00224 Pyruvate kinase, barrel domain CO218_00770 PF00391 PEP-utilising enzyme, mobile domain CO218_00775 PF00665 Integrase core domain CO218_00775 PF13936 Helix-turn-helix domain CO218_00780 PF00365 Phosphofructokinase CO218_00785 PF01336 OB-fold nucleic acid binding domain CO218_00785 PF14579 Helix-hairpin-helix motif CO218_00785 PF02811 PHP domain CO218_00785 PF07733 Bacterial DNA polymerase III alpha NTPase domain CO218_00785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CO218_00795 PF00004 ATPase family associated with various cellular activities (AAA) CO218_00795 PF07724 AAA domain (Cdc48 subfamily) CO218_00795 PF17871 AAA lid domain CO218_00795 PF02861 Clp amino terminal domain, pathogenicity island component CO218_00795 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_00800 PF07687 Peptidase dimerisation domain CO218_00800 PF01546 Peptidase family M20/M25/M40 CO218_00805 PF01784 NIF3 (NGG1p interacting factor 3) CO218_00810 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CO218_00820 PF01061 ABC-2 type transporter CO218_00835 PF00391 PEP-utilising enzyme, mobile domain CO218_00835 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CO218_00835 PF02896 PEP-utilising enzyme, TIM barrel domain CO218_00845 PF01047 MarR family CO218_00875 PF07690 Major Facilitator Superfamily CO218_00890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_00890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_00895 PF08220 DeoR-like helix-turn-helix domain CO218_00895 PF00455 DeoR C terminal sensor domain CO218_00915 PF13936 Helix-turn-helix domain CO218_00920 PF01380 SIS domain CO218_00920 PF01418 Helix-turn-helix domain, rpiR family CO218_00940 PF03466 LysR substrate binding domain CO218_00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_00945 PF00107 Zinc-binding dehydrogenase CO218_00945 PF08240 Alcohol dehydrogenase GroES-like domain CO218_00955 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_00955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_00960 PF00196 Bacterial regulatory proteins, luxR family CO218_00960 PF00072 Response regulator receiver domain CO218_00965 PF07730 Histidine kinase CO218_00975 PF00005 ABC transporter CO218_00985 PF00958 GMP synthase C terminal domain CO218_00985 PF13673 Acetyltransferase (GNAT) domain CO218_00985 PF03352 Methyladenine glycosylase CO218_00985 PF13302 Acetyltransferase (GNAT) domain CO218_00985 PF00117 Glutamine amidotransferase class-I CO218_01020 PF00005 ABC transporter CO218_01025 PF00392 Bacterial regulatory proteins, gntR family CO218_01035 PF04545 Sigma-70, region 4 CO218_01035 PF04542 Sigma-70 region 2 CO218_01035 PF00140 Sigma-70 factor, region 1.2 CO218_01035 PF03979 Sigma-70 factor, region 1.1 CO218_01035 PF04539 Sigma-70 region 3 CO218_01040 PF01807 CHC2 zinc finger CO218_01040 PF08275 DNA primase catalytic core, N-terminal domain CO218_01040 PF10410 DnaB-helicase binding domain of primase CO218_01045 PF02092 Glycyl-tRNA synthetase beta subunit CO218_01050 PF02091 Glycyl-tRNA synthetase alpha subunit CO218_01055 PF02565 Recombination protein O C terminal CO218_01055 PF11967 Recombination protein O N terminal CO218_01060 PF01926 50S ribosome-binding GTPase CO218_01060 PF07650 KH domain CO218_01065 PF01219 Prokaryotic diacylglycerol kinase CO218_01070 PF02130 Uncharacterized protein family UPF0054 CO218_01075 PF02562 PhoH-like protein CO218_01080 PF09424 Yqey-like protein CO218_01085 PF01165 Ribosomal protein S21 CO218_01090 PF03618 Kinase/pyrophosphorylase CO218_01100 PF00872 Transposase, Mutator family CO218_01105 PF01261 Xylose isomerase-like TIM barrel CO218_01110 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CO218_01115 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CO218_01115 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CO218_01120 PF01625 Peptide methionine sulfoxide reductase CO218_01125 PF02938 GAD domain CO218_01125 PF00152 tRNA synthetases class II (D, K and N) CO218_01125 PF01336 OB-fold nucleic acid binding domain CO218_01130 PF03129 Anticodon binding domain CO218_01130 PF13393 Histidyl-tRNA synthetase CO218_01135 PF01520 N-acetylmuramoyl-L-alanine amidase CO218_01135 PF08239 Bacterial SH3 domain CO218_01140 PF03881 Fructosamine kinase CO218_01145 PF13419 Haloacid dehalogenase-like hydrolase CO218_01150 PF02580 D-Tyr-tRNA(Tyr) deacylase CO218_01155 PF04607 Region found in RelA / SpoT proteins CO218_01155 PF02824 TGS domain CO218_01155 PF13291 ACT domain CO218_01165 PF04452 RNA methyltransferase CO218_01175 PF02245 Methylpurine-DNA glycosylase (MPG) CO218_01190 PF00679 Elongation factor G C-terminus CO218_01190 PF00009 Elongation factor Tu GTP binding domain CO218_01190 PF03144 Elongation factor Tu domain 2 CO218_01190 PF06421 GTP-binding protein LepA C-terminus CO218_01195 PF03050 Transposase IS66 family CO218_01195 PF13005 zinc-finger binding domain of transposase IS66 CO218_01195 PF13007 Transposase C of IS166 homeodomain CO218_01195 PF13817 IS66 C-terminal element CO218_01210 PF04914 DltD protein CO218_01215 PF00550 Phosphopantetheine attachment site CO218_01220 PF03062 MBOAT, membrane-bound O-acyltransferase family CO218_01235 PF00144 Beta-lactamase CO218_01235 PF11954 Domain of unknown function (DUF3471) CO218_01240 PF00684 DnaJ central domain CO218_01240 PF01556 DnaJ C terminal domain CO218_01240 PF00226 DnaJ domain CO218_01245 PF00012 Hsp70 protein CO218_01250 PF01025 GrpE CO218_01255 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CO218_01255 PF01628 HrcA protein C terminal domain CO218_01260 PF03306 Alpha-acetolactate decarboxylase CO218_01265 PF06574 FAD synthetase CO218_01265 PF01687 Riboflavin kinase CO218_01270 PF01509 TruB family pseudouridylate synthase (N terminal domain) CO218_01270 PF16198 tRNA pseudouridylate synthase B C-terminal domain CO218_01275 PF01202 Shikimate kinase CO218_01280 PF01842 ACT domain CO218_01280 PF02153 Prephenate dehydrogenase CO218_01285 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CO218_01295 PF01264 Chorismate synthase CO218_01300 PF07690 Major Facilitator Superfamily CO218_01315 PF02033 Ribosome-binding factor A CO218_01320 PF00009 Elongation factor Tu GTP binding domain CO218_01320 PF11987 Translation-initiation factor 2 CO218_01320 PF04760 Translation initiation factor IF-2, N-terminal region CO218_01325 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CO218_01330 PF04296 Protein of unknown function (DUF448) CO218_01335 PF00575 S1 RNA binding domain CO218_01335 PF08529 NusA N-terminal domain CO218_01335 PF13184 NusA-like KH domain CO218_01340 PF17384 RimP C-terminal SH3 domain CO218_01340 PF02576 RimP N-terminal domain CO218_01345 PF00929 Exonuclease CO218_01345 PF02811 PHP domain CO218_01345 PF11490 DNA polymerase III polC-type N-terminus II CO218_01345 PF07733 Bacterial DNA polymerase III alpha NTPase domain CO218_01345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CO218_01345 PF14480 DNA polymerase III polC-type N-terminus I CO218_01345 PF14579 Helix-hairpin-helix motif CO218_01350 PF04073 Aminoacyl-tRNA editing domain CO218_01350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CO218_01350 PF03129 Anticodon binding domain CO218_01355 PF17820 PDZ domain CO218_01355 PF02163 Peptidase family M50 CO218_01365 PF01255 Putative undecaprenyl diphosphate synthase CO218_01370 PF01765 Ribosome recycling factor CO218_01375 PF00696 Amino acid kinase family CO218_01380 PF00889 Elongation factor TS CO218_01385 PF00318 Ribosomal protein S2 CO218_01395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CO218_01395 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CO218_01400 PF01541 GIY-YIG catalytic domain CO218_01405 PF05175 Methyltransferase small domain CO218_01410 PF01553 Acyltransferase CO218_01415 PF03672 Uncharacterised protein family (UPF0154) CO218_01420 PF05979 Bacterial protein of unknown function (DUF896) CO218_01425 PF00717 Peptidase S24-like CO218_01425 PF01726 LexA DNA binding domain CO218_01440 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CO218_01440 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CO218_01455 PF00535 Glycosyl transferase family 2 CO218_01720 PF00929 Exonuclease CO218_01720 PF02811 PHP domain CO218_01720 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CO218_01720 PF14579 Helix-hairpin-helix motif CO218_01720 PF07733 Bacterial DNA polymerase III alpha NTPase domain CO218_01720 PF11490 DNA polymerase III polC-type N-terminus II CO218_01755 PF01906 Putative heavy-metal-binding CO218_01770 PF00156 Phosphoribosyl transferase domain CO218_01775 PF17768 RecJ OB domain CO218_01775 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CO218_01775 PF02272 DHHA1 domain CO218_01775 PF01368 DHH family CO218_01780 PF06305 Lipopolysaccharide assembly protein A domain CO218_01785 PF00106 short chain dehydrogenase CO218_01790 PF12706 Beta-lactamase superfamily domain CO218_01790 PF00753 Metallo-beta-lactamase superfamily CO218_01800 PF09269 Domain of unknown function (DUF1967) CO218_01800 PF01018 GTP1/OBG CO218_01800 PF01926 50S ribosome-binding GTPase CO218_01805 PF08220 DeoR-like helix-turn-helix domain CO218_01805 PF00455 DeoR C terminal sensor domain CO218_01810 PF00294 pfkB family carbohydrate kinase CO218_01815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_01815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CO218_01820 PF00149 Calcineurin-like phosphoesterase CO218_01845 PF00862 Sucrose synthase CO218_01845 PF00534 Glycosyl transferases group 1 CO218_01850 PF02397 Bacterial sugar transferase CO218_01865 PF13614 AAA domain CO218_01875 PF08459 UvrC Helix-hairpin-helix N-terminal CO218_01875 PF02151 UvrB/uvrC motif CO218_01875 PF01541 GIY-YIG catalytic domain CO218_01880 PF00005 ABC transporter CO218_01885 PF00528 Binding-protein-dependent transport system inner membrane component CO218_01905 PF01926 50S ribosome-binding GTPase CO218_01910 PF06689 ClpX C4-type zinc finger CO218_01910 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_01910 PF07724 AAA domain (Cdc48 subfamily) CO218_01915 PF05697 Bacterial trigger factor protein (TF) CO218_01915 PF05698 Bacterial trigger factor protein (TF) C-terminus CO218_01915 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CO218_01920 PF03143 Elongation factor Tu C-terminal domain CO218_01920 PF03144 Elongation factor Tu domain 2 CO218_01920 PF00009 Elongation factor Tu GTP binding domain CO218_01930 PF00753 Metallo-beta-lactamase superfamily CO218_01930 PF17770 Ribonuclease J C-terminal domain CO218_01930 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CO218_01935 PF00701 Dihydrodipicolinate synthetase family CO218_01945 PF00312 Ribosomal protein S15 CO218_01950 PF01649 Ribosomal protein S20 CO218_01955 PF06144 DNA polymerase III, delta subunit CO218_01965 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CO218_01970 PF10531 SLBB domain CO218_01975 PF13180 PDZ domain CO218_01975 PF05362 Lon protease (S16) C-terminal proteolytic domain CO218_01980 PF01467 Cytidylyltransferase-like CO218_01990 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CO218_01995 PF00289 Biotin carboxylase, N-terminal domain CO218_01995 PF02785 Biotin carboxylase C-terminal domain CO218_01995 PF02436 Conserved carboxylase domain CO218_01995 PF00682 HMGL-like CO218_01995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_01995 PF00364 Biotin-requiring enzyme CO218_02000 PF01098 Cell cycle protein CO218_02010 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 CO218_02010 PF00535 Glycosyl transferase family 2 CO218_02035 PF00872 Transposase, Mutator family CO218_02045 PF14492 Elongation Factor G, domain II CO218_02045 PF00009 Elongation factor Tu GTP binding domain CO218_02045 PF03144 Elongation factor Tu domain 2 CO218_02045 PF00679 Elongation factor G C-terminus CO218_02050 PF00459 Inositol monophosphatase family CO218_02055 PF05256 Uncharacterised protein family (UPF0223) CO218_02060 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_02060 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_02065 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_02065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_02070 PF02817 e3 binding domain CO218_02070 PF00364 Biotin-requiring enzyme CO218_02070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CO218_02075 PF02779 Transketolase, pyrimidine binding domain CO218_02075 PF02780 Transketolase, C-terminal domain CO218_02080 PF00676 Dehydrogenase E1 component CO218_02085 PF01327 Polypeptide deformylase CO218_02095 PF07288 Protein of unknown function (DUF1447) CO218_02100 PF17770 Ribonuclease J C-terminal domain CO218_02100 PF00753 Metallo-beta-lactamase superfamily CO218_02100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CO218_02105 PF00781 Diacylglycerol kinase catalytic domain CO218_02115 PF06725 3D domain CO218_02115 PF01476 LysM domain CO218_02120 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CO218_02120 PF14572 Phosphoribosyl synthetase-associated domain CO218_02125 PF13538 UvrD-like helicase C-terminal domain CO218_02125 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CO218_02125 PF14490 Helix-hairpin-helix containing domain CO218_02135 PF00300 Histidine phosphatase superfamily (branch 1) CO218_02160 PF02080 TrkA-C domain CO218_02160 PF02254 TrkA-N domain CO218_02165 PF02386 Cation transport protein CO218_02180 PF00266 Aminotransferase class-V CO218_02185 PF01048 Phosphorylase superfamily CO218_02195 PF00293 NUDIX domain CO218_02200 PF01678 Diaminopimelate epimerase CO218_02210 PF00072 Response regulator receiver domain CO218_02210 PF04397 LytTr DNA-binding domain CO218_02220 PF00005 ABC transporter CO218_02225 PF08264 Anticodon-binding domain of tRNA CO218_02225 PF00133 tRNA synthetases class I (I, L, M and V) CO218_02225 PF06827 Zinc finger found in FPG and IleRS CO218_02230 PF05103 DivIVA protein CO218_02240 PF02325 YGGT family CO218_02245 PF04472 Cell division protein SepF CO218_02250 PF12327 FtsZ family, C-terminal domain CO218_02250 PF00091 Tubulin/FtsZ family, GTPase domain CO218_02255 PF11983 Membrane-attachment and polymerisation-promoting switch CO218_02255 PF02491 SHS2 domain inserted in FTSA CO218_02260 PF03799 Cell division protein FtsQ CO218_02260 PF08478 POTRA domain, FtsQ-type CO218_02265 PF04101 Glycosyltransferase family 28 C-terminal domain CO218_02265 PF03033 Glycosyltransferase family 28 N-terminal domain CO218_02270 PF08245 Mur ligase middle domain CO218_02270 PF02875 Mur ligase family, glutamate ligase domain CO218_02275 PF00953 Glycosyl transferase family 4 CO218_02275 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CO218_02280 PF03793 PASTA domain CO218_02280 PF03717 Penicillin-binding Protein dimerisation domain CO218_02280 PF00905 Penicillin binding protein transpeptidase domain CO218_02290 PF01795 MraW methylase family CO218_02295 PF02381 MraZ protein, putative antitoxin-like CO218_02315 PF09397 Ftsk gamma domain CO218_02315 PF01580 FtsK/SpoIIIE family CO218_02315 PF17854 FtsK alpha domain CO218_02320 PF00588 SpoU rRNA Methylase family CO218_02330 PF05525 Branched-chain amino acid transport protein CO218_02345 PF00253 Ribosomal protein S14p/S29e CO218_02350 PF01594 AI-2E family transporter CO218_02360 PF10282 Lactonase, 7-bladed beta-propeller CO218_02365 PF03932 CutC family CO218_02370 PF00849 RNA pseudouridylate synthase CO218_02375 PF01513 ATP-NAD kinase CO218_02380 PF04607 Region found in RelA / SpoT proteins CO218_02390 PF08439 Oligopeptidase F CO218_02390 PF01432 Peptidase family M3 CO218_02400 PF05389 Negative regulator of genetic competence (MecA) CO218_02410 PF00665 Integrase core domain CO218_02410 PF13936 Helix-turn-helix domain CO218_02415 PF12706 Beta-lactamase superfamily domain CO218_02555 PF00575 S1 RNA binding domain CO218_02560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CO218_02565 PF09335 SNARE associated Golgi protein CO218_02575 PF13344 Haloacid dehalogenase-like hydrolase CO218_02580 PF06265 Protein of unknown function (DUF1027) CO218_02585 PF02872 5'-nucleotidase, C-terminal domain CO218_02600 PF00324 Amino acid permease CO218_02605 PF00871 Acetokinase family CO218_02610 PF02384 N-6 DNA Methylase CO218_02640 PF00437 Type II/IV secretion system protein CO218_02645 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CO218_02645 PF00294 pfkB family carbohydrate kinase CO218_02650 PF01709 Transcriptional regulator CO218_02665 PF00356 Bacterial regulatory proteins, lacI family CO218_02670 PF00557 Metallopeptidase family M24 CO218_02670 PF01321 Creatinase/Prolidase N-terminal domain CO218_02675 PF13411 MerR HTH family regulatory protein CO218_02690 PF00924 Mechanosensitive ion channel CO218_02695 PF13333 Integrase core domain CO218_02695 PF13276 HTH-like domain CO218_02695 PF00665 Integrase core domain CO218_02705 PF07687 Peptidase dimerisation domain CO218_02705 PF01546 Peptidase family M20/M25/M40 CO218_02710 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CO218_02710 PF00132 Bacterial transferase hexapeptide (six repeats) CO218_02710 PF14602 Hexapeptide repeat of succinyl-transferase CO218_02725 PF01725 Ham1 family CO218_02730 PF01177 Asp/Glu/Hydantoin racemase CO218_02735 PF10702 Protein of unknown function (DUF2507) CO218_02740 PF00085 Thioredoxin CO218_02745 PF01713 Smr domain CO218_02745 PF00488 MutS domain V CO218_02755 PF06949 Protein of unknown function (DUF1292) CO218_02760 PF03652 Holliday junction resolvase CO218_02765 PF06135 IreB regulatory phosphoprotein CO218_02770 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CO218_02770 PF02272 DHHA1 domain CO218_02770 PF01411 tRNA synthetases class II (A) CO218_02775 PF00271 Helicase conserved C-terminal domain CO218_02775 PF00270 DEAD/DEAH box helicase CO218_02780 PF02272 DHHA1 domain CO218_02780 PF01368 DHH family CO218_02785 PF11799 impB/mucB/samB family C-terminal domain CO218_02785 PF00817 impB/mucB/samB family CO218_02790 PF02699 Preprotein translocase subunit CO218_02795 PF01702 Queuine tRNA-ribosyltransferase CO218_02800 PF02547 Queuosine biosynthesis protein CO218_02805 PF05496 Holliday junction DNA helicase RuvB P-loop domain CO218_02805 PF05491 RuvB C-terminal winged helix domain CO218_02805 PF17864 RuvB AAA lid domain CO218_02810 PF01330 RuvA N terminal domain CO218_02810 PF07499 RuvA, C-terminal domain CO218_02840 PF01119 DNA mismatch repair protein, C-terminal domain CO218_02840 PF08676 MutL C terminal dimerisation domain CO218_02845 PF01624 MutS domain I CO218_02845 PF05188 MutS domain II CO218_02845 PF00488 MutS domain V CO218_02845 PF05190 MutS family domain IV CO218_02845 PF05192 MutS domain III CO218_02850 PF13277 YmdB-like protein CO218_02855 PF12072 Domain of unknown function (DUF3552) CO218_02855 PF00013 KH domain CO218_02855 PF01966 HD domain CO218_02860 PF00154 recA bacterial DNA recombination protein CO218_02865 PF00994 Probable molybdopterin binding domain CO218_02865 PF18146 Damage-inducible protein CinA KH domain CO218_02865 PF02464 Competence-damaged protein CO218_02870 PF01066 CDP-alcohol phosphatidyltransferase CO218_02875 PF13464 Domain of unknown function (DUF4115) CO218_02880 PF00675 Insulinase (Peptidase family M16) CO218_02880 PF05193 Peptidase M16 inactive domain CO218_02885 PF05193 Peptidase M16 inactive domain CO218_02890 PF00696 Amino acid kinase family CO218_02890 PF13840 ACT domain CO218_02900 PF00497 Bacterial extracellular solute-binding proteins, family 3 CO218_02905 PF00005 ABC transporter CO218_02910 PF00528 Binding-protein-dependent transport system inner membrane component CO218_02915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CO218_02920 PF03775 Septum formation inhibitor MinC, C-terminal domain CO218_02930 PF04085 rod shape-determining protein MreC CO218_02945 PF08245 Mur ligase middle domain CO218_02945 PF02875 Mur ligase family, glutamate ligase domain CO218_02950 PF00133 tRNA synthetases class I (I, L, M and V) CO218_02950 PF08264 Anticodon-binding domain of tRNA CO218_02950 PF10458 Valyl tRNA synthetase tRNA binding arm CO218_02955 PF08534 Redoxin CO218_02960 PF04262 Glutamate-cysteine ligase CO218_02960 PF18419 ATP-grasp-like domain CO218_02960 PF02655 ATP-grasp domain CO218_02965 PF02926 THUMP domain CO218_02965 PF02568 Thiamine biosynthesis protein (ThiI) CO218_02970 PF00266 Aminotransferase class-V CO218_02980 PF06160 Septation ring formation regulator, EzrA CO218_02985 PF13185 GAF domain CO218_02990 PF01479 S4 domain CO218_02990 PF00163 Ribosomal protein S4/S9 N-terminal domain CO218_02995 PF06335 Protein of unknown function (DUF1054) CO218_03010 PF01022 Bacterial regulatory protein, arsR family CO218_03015 PF00128 Alpha amylase, catalytic domain CO218_03025 PF03613 PTS system mannose/fructose/sorbose family IID component CO218_03030 PF03609 PTS system sorbose-specific iic component CO218_03035 PF03830 PTS system sorbose subfamily IIB component CO218_03040 PF00356 Bacterial regulatory proteins, lacI family CO218_03045 PF04262 Glutamate-cysteine ligase CO218_03045 PF18419 ATP-grasp-like domain CO218_03050 PF05496 Holliday junction DNA helicase RuvB P-loop domain CO218_03050 PF12002 MgsA AAA+ ATPase C terminal CO218_03050 PF16193 AAA C-terminal domain CO218_03065 PF00582 Universal stress protein family CO218_03085 PF07478 D-ala D-ala ligase C-terminus CO218_03085 PF01820 D-ala D-ala ligase N-terminus CO218_03090 PF00107 Zinc-binding dehydrogenase CO218_03090 PF08240 Alcohol dehydrogenase GroES-like domain CO218_03100 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_03100 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_03105 PF03180 NLPA lipoprotein CO218_03110 PF00528 Binding-protein-dependent transport system inner membrane component CO218_03115 PF00005 ABC transporter CO218_03115 PF09383 NIL domain CO218_03120 PF01597 Glycine cleavage H-protein CO218_03125 PF01098 Cell cycle protein CO218_03135 PF01809 Putative membrane protein insertion efficiency factor CO218_03150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CO218_03155 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CO218_03155 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CO218_03160 PF02874 ATP synthase alpha/beta family, beta-barrel domain CO218_03160 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CO218_03165 PF00231 ATP synthase CO218_03170 PF00306 ATP synthase alpha/beta chain, C terminal domain CO218_03170 PF02874 ATP synthase alpha/beta family, beta-barrel domain CO218_03170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CO218_03175 PF00213 ATP synthase delta (OSCP) subunit CO218_03180 PF00430 ATP synthase B/B' CF(0) CO218_03185 PF00137 ATP synthase subunit C CO218_03190 PF00119 ATP synthase A chain CO218_03195 PF00860 Permease family CO218_03210 PF00464 Serine hydroxymethyltransferase CO218_03215 PF03481 Putative GTP-binding controlling metal-binding CO218_03215 PF01300 Telomere recombination CO218_03220 PF17827 PrmC N-terminal domain CO218_03220 PF05175 Methyltransferase small domain CO218_03225 PF00472 RF-1 domain CO218_03225 PF03462 PCRF domain CO218_03230 PF00265 Thymidine kinase CO218_03235 PF08353 Domain of unknown function (DUF1727) CO218_03235 PF08245 Mur ligase middle domain CO218_03240 PF07685 CobB/CobQ-like glutamine amidotransferase domain CO218_03245 PF01238 Phosphomannose isomerase type I CO218_03250 PF00144 Beta-lactamase CO218_03260 PF01063 Amino-transferase class IV CO218_03270 PF13276 HTH-like domain CO218_03270 PF13333 Integrase core domain CO218_03270 PF00665 Integrase core domain CO218_03285 PF00664 ABC transporter transmembrane region CO218_03285 PF00005 ABC transporter CO218_03290 PF00005 ABC transporter CO218_03290 PF00664 ABC transporter transmembrane region CO218_03300 PF01522 Polysaccharide deacetylase CO218_03310 PF02661 Fic/DOC family CO218_03310 PF13784 Fic/DOC family N-terminal CO218_03325 PF01476 LysM domain CO218_03440 PF04466 Phage terminase large subunit CO218_03440 PF17288 Terminase RNAseH like domain CO218_03445 PF03592 Terminase small subunit CO218_03445 PF10668 Phage terminase small subunit CO218_03595 PF03992 Antibiotic biosynthesis monooxygenase CO218_03645 PF04860 Phage portal protein CO218_03720 PF00589 Phage integrase family CO218_03720 PF02899 Phage integrase, N-terminal SAM-like domain CO218_03730 PF00665 Integrase core domain CO218_03730 PF13276 HTH-like domain CO218_03730 PF13333 Integrase core domain CO218_03755 PF06458 MucBP domain CO218_03795 PF00664 ABC transporter transmembrane region CO218_03795 PF00005 ABC transporter CO218_03805 PF02687 FtsX-like permease family CO218_03805 PF00005 ABC transporter CO218_03805 PF12704 MacB-like periplasmic core domain CO218_03815 PF00342 Phosphoglucose isomerase CO218_03820 PF06800 Sugar transport protein CO218_03825 PF17785 PUA-like domain CO218_03825 PF10672 S-adenosylmethionine-dependent methyltransferase CO218_03830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_03830 PF00512 His Kinase A (phospho-acceptor) domain CO218_03830 PF00672 HAMP domain CO218_03835 PF00072 Response regulator receiver domain CO218_03835 PF00486 Transcriptional regulatory protein, C terminal CO218_03840 PF05167 Uncharacterised ACR (DUF711) CO218_03850 PF00892 EamA-like transporter family CO218_03865 PF00005 ABC transporter CO218_03905 PF00877 NlpC/P60 family CO218_03910 PF01037 Lrp/AsnC ligand binding domain CO218_03925 PF00990 Diguanylate cyclase, GGDEF domain CO218_03930 PF12848 ABC transporter CO218_03930 PF00005 ABC transporter CO218_03950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CO218_03960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_03960 PF02378 Phosphotransferase system, EIIC CO218_03960 PF00367 phosphotransferase system, EIIB CO218_03965 PF02558 Ketopantoate reductase PanE/ApbA CO218_03965 PF08546 Ketopantoate reductase PanE/ApbA C terminal CO218_03975 PF02645 Uncharacterised protein, DegV family COG1307 CO218_03985 PF01053 Cys/Met metabolism PLP-dependent enzyme CO218_03990 PF04204 Homoserine O-succinyltransferase CO218_04005 PF02653 Branched-chain amino acid transport system / permease component CO218_04010 PF00005 ABC transporter CO218_04015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_04015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_04040 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CO218_04040 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CO218_04045 PF03741 Integral membrane protein TerC family CO218_04050 PF14602 Hexapeptide repeat of succinyl-transferase CO218_04050 PF12464 Maltose acetyltransferase CO218_04060 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CO218_04065 PF01502 Phosphoribosyl-AMP cyclohydrolase CO218_04070 PF00977 Histidine biosynthesis protein CO218_04075 PF00977 Histidine biosynthesis protein CO218_04080 PF00117 Glutamine amidotransferase class-I CO218_04085 PF00475 Imidazoleglycerol-phosphate dehydratase CO218_04090 PF00815 Histidinol dehydrogenase CO218_04100 PF13393 Histidyl-tRNA synthetase CO218_04105 PF02811 PHP domain CO218_04130 PF01118 Semialdehyde dehydrogenase, NAD binding domain CO218_04130 PF02774 Semialdehyde dehydrogenase, dimerisation domain CO218_04145 PF13333 Integrase core domain CO218_04145 PF00665 Integrase core domain CO218_04145 PF13276 HTH-like domain CO218_04160 PF00884 Sulfatase CO218_04165 PF03009 Glycerophosphoryl diester phosphodiesterase family CO218_04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_04185 PF00746 LPXTG cell wall anchor motif CO218_04185 PF05737 Collagen binding domain CO218_04185 PF17961 Bacterial Ig domain CO218_04190 PF03976 Polyphosphate kinase 2 (PPK2) CO218_04195 PF00881 Nitroreductase family CO218_04200 PF01156 Inosine-uridine preferring nucleoside hydrolase CO218_04205 PF00075 RNase H CO218_04210 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CO218_04215 PF00356 Bacterial regulatory proteins, lacI family CO218_04215 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CO218_04220 PF01380 SIS domain CO218_04220 PF01418 Helix-turn-helix domain, rpiR family CO218_04225 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CO218_04225 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CO218_04230 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CO218_04230 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CO218_04235 PF00999 Sodium/hydrogen exchanger family CO218_04245 PF00857 Isochorismatase family CO218_04255 PF00005 ABC transporter CO218_04260 PF00392 Bacterial regulatory proteins, gntR family CO218_04300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO218_04300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO218_04300 PF00205 Thiamine pyrophosphate enzyme, central domain CO218_04310 PF00326 Prolyl oligopeptidase family CO218_04315 PF00085 Thioredoxin CO218_04320 PF01053 Cys/Met metabolism PLP-dependent enzyme CO218_04350 PF10437 Bacterial lipoate protein ligase C-terminus CO218_04350 PF03099 Biotin/lipoate A/B protein ligase family CO218_04355 PF13457 GW (Gly-Tryp) dipeptide domain CO218_04355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CO218_04365 PF00582 Universal stress protein family CO218_04370 PF00849 RNA pseudouridylate synthase CO218_04370 PF01479 S4 domain CO218_04375 PF08671 Anti-repressor SinI CO218_04375 PF01381 Helix-turn-helix CO218_04385 PF00534 Glycosyl transferases group 1 CO218_04390 PF09363 XFP C-terminal domain CO218_04390 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CO218_04390 PF09364 XFP N-terminal domain CO218_04395 PF00756 Putative esterase CO218_04400 PF07702 UTRA domain CO218_04400 PF00392 Bacterial regulatory proteins, gntR family CO218_04405 PF04073 Aminoacyl-tRNA editing domain CO218_04415 PF01966 HD domain CO218_04445 PF03471 Transporter associated domain CO218_04445 PF01595 Cyclin M transmembrane N-terminal domain CO218_04445 PF00571 CBS domain CO218_04460 PF07972 NrdI Flavodoxin like CO218_04470 PF00999 Sodium/hydrogen exchanger family CO218_04475 PF07690 Major Facilitator Superfamily CO218_04480 PF00872 Transposase, Mutator family CO218_04485 PF07739 TipAS antibiotic-recognition domain CO218_04485 PF13411 MerR HTH family regulatory protein CO218_04490 PF08240 Alcohol dehydrogenase GroES-like domain CO218_04490 PF00107 Zinc-binding dehydrogenase CO218_04500 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CO218_04500 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CO218_04510 PF00392 Bacterial regulatory proteins, gntR family CO218_04510 PF00155 Aminotransferase class I and II CO218_04515 PF00155 Aminotransferase class I and II CO218_04520 PF00701 Dihydrodipicolinate synthetase family CO218_04535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_04535 PF03466 LysR substrate binding domain CO218_04540 PF13460 NAD(P)H-binding CO218_04550 PF12705 PD-(D/E)XK nuclease superfamily CO218_04550 PF00580 UvrD/REP helicase N-terminal domain CO218_04550 PF13361 UvrD-like helicase C-terminal domain CO218_04555 PF12705 PD-(D/E)XK nuclease superfamily CO218_04565 PF00156 Phosphoribosyl transferase domain CO218_04570 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CO218_04575 PF01180 Dihydroorotate dehydrogenase CO218_04580 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_04580 PF02142 MGS-like domain CO218_04580 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CO218_04585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CO218_04585 PF00117 Glutamine amidotransferase class-I CO218_04590 PF01979 Amidohydrolase family CO218_04595 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CO218_04595 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CO218_04600 PF00156 Phosphoribosyl transferase domain CO218_04605 PF17853 GGDEF-like domain CO218_04605 PF13556 PucR C-terminal helix-turn-helix domain CO218_04605 PF07905 Purine catabolism regulatory protein-like family CO218_04610 PF00860 Permease family CO218_04615 PF00860 Permease family CO218_04645 PF02844 Phosphoribosylglycinamide synthetase, N domain CO218_04645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CO218_04645 PF02843 Phosphoribosylglycinamide synthetase, C domain CO218_04650 PF01808 AICARFT/IMPCHase bienzyme CO218_04650 PF02142 MGS-like domain CO218_04655 PF00551 Formyl transferase CO218_04660 PF02769 AIR synthase related protein, C-terminal domain CO218_04660 PF00586 AIR synthase related protein, N-terminal domain CO218_04665 PF00156 Phosphoribosyl transferase domain CO218_04665 PF13537 Glutamine amidotransferase domain CO218_04670 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CO218_04670 PF00586 AIR synthase related protein, N-terminal domain CO218_04670 PF02769 AIR synthase related protein, C-terminal domain CO218_04680 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CO218_04685 PF01259 SAICAR synthetase CO218_04690 PF02222 ATP-grasp domain CO218_04690 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CO218_04695 PF00731 AIR carboxylase CO218_04700 PF03358 NADPH-dependent FMN reductase CO218_04700 PF04205 FMN-binding domain CO218_04700 PF00890 FAD binding domain CO218_04705 PF03358 NADPH-dependent FMN reductase CO218_04705 PF04205 FMN-binding domain CO218_04705 PF00890 FAD binding domain CO218_04710 PF03099 Biotin/lipoate A/B protein ligase family CO218_04710 PF10437 Bacterial lipoate protein ligase C-terminus CO218_04715 PF13350 Tyrosine phosphatase family CO218_04730 PF00710 Asparaginase, N-terminal CO218_04730 PF17763 Glutaminase/Asparaginase C-terminal domain CO218_04735 PF00005 ABC transporter CO218_04750 PF00392 Bacterial regulatory proteins, gntR family CO218_04755 PF00005 ABC transporter CO218_04765 PF00582 Universal stress protein family CO218_04775 PF04138 GtrA-like protein CO218_04795 PF00155 Aminotransferase class I and II CO218_04820 PF13333 Integrase core domain CO218_04820 PF00665 Integrase core domain CO218_04820 PF13276 HTH-like domain CO218_04825 PF00128 Alpha amylase, catalytic domain CO218_04825 PF02903 Alpha amylase, N-terminal ig-like domain CO218_04830 PF14821 Threonine synthase N terminus CO218_04830 PF00291 Pyridoxal-phosphate dependent enzyme CO218_04845 PF00132 Bacterial transferase hexapeptide (six repeats) CO218_04845 PF12464 Maltose acetyltransferase CO218_04850 PF00293 NUDIX domain CO218_04885 PF02829 3H domain CO218_04885 PF08279 HTH domain CO218_04890 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CO218_04890 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CO218_04890 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CO218_04895 PF00440 Bacterial regulatory proteins, tetR family CO218_04905 PF00005 ABC transporter CO218_04910 PF00291 Pyridoxal-phosphate dependent enzyme CO218_04915 PF00872 Transposase, Mutator family CO218_04920 PF00232 Glycosyl hydrolase family 1 CO218_04925 PF00232 Glycosyl hydrolase family 1 CO218_04930 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CO218_04935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_04940 PF07702 UTRA domain CO218_04940 PF00392 Bacterial regulatory proteins, gntR family CO218_04945 PF00535 Glycosyl transferase family 2 CO218_04950 PF00300 Histidine phosphatase superfamily (branch 1) CO218_04965 PF08546 Ketopantoate reductase PanE/ApbA C terminal CO218_04965 PF02558 Ketopantoate reductase PanE/ApbA CO218_04970 PF00892 EamA-like transporter family CO218_04975 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CO218_04990 PF00258 Flavodoxin CO218_05010 PF01487 Type I 3-dehydroquinase CO218_05015 PF13520 Amino acid permease CO218_05025 PF00248 Aldo/keto reductase family CO218_05030 PF00248 Aldo/keto reductase family CO218_05060 PF07155 ECF-type riboflavin transporter, S component CO218_05065 PF00579 tRNA synthetases class I (W and Y) CO218_05065 PF01479 S4 domain CO218_05080 PF13529 Peptidase_C39 like family CO218_05100 PF04474 Protein of unknown function (DUF554) CO218_05105 PF13936 Helix-turn-helix domain CO218_05110 PF06445 GyrI-like small molecule binding domain CO218_05110 PF13411 MerR HTH family regulatory protein CO218_05115 PF00375 Sodium:dicarboxylate symporter family CO218_05125 PF02687 FtsX-like permease family CO218_05130 PF00005 ABC transporter CO218_05140 PF01156 Inosine-uridine preferring nucleoside hydrolase CO218_05150 PF00999 Sodium/hydrogen exchanger family CO218_05165 PF00206 Lyase CO218_05165 PF10415 Fumarase C C-terminus CO218_05170 PF07690 Major Facilitator Superfamily CO218_05180 PF07690 Major Facilitator Superfamily CO218_05190 PF13302 Acetyltransferase (GNAT) domain CO218_05195 PF03601 Conserved hypothetical protein 698 CO218_05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_05200 PF03466 LysR substrate binding domain CO218_05205 PF00534 Glycosyl transferases group 1 CO218_05205 PF13439 Glycosyltransferase Family 4 CO218_05210 PF13439 Glycosyltransferase Family 4 CO218_05225 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CO218_05225 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CO218_05235 PF13732 Domain of unknown function (DUF4162) CO218_05235 PF00005 ABC transporter CO218_05245 PF00106 short chain dehydrogenase CO218_05260 PF13411 MerR HTH family regulatory protein CO218_05265 PF01872 RibD C-terminal domain CO218_05275 PF07687 Peptidase dimerisation domain CO218_05275 PF01546 Peptidase family M20/M25/M40 CO218_05285 PF00005 ABC transporter CO218_05290 PF00633 Helix-hairpin-helix motif CO218_05290 PF00730 HhH-GPD superfamily base excision DNA repair protein CO218_05295 PF14602 Hexapeptide repeat of succinyl-transferase CO218_05295 PF12464 Maltose acetyltransferase CO218_05300 PF10502 Signal peptidase, peptidase S26 CO218_05305 PF10502 Signal peptidase, peptidase S26 CO218_05315 PF00583 Acetyltransferase (GNAT) family CO218_05345 PF13936 Helix-turn-helix domain CO218_05360 PF00107 Zinc-binding dehydrogenase CO218_05360 PF08240 Alcohol dehydrogenase GroES-like domain CO218_05375 PF00582 Universal stress protein family CO218_05380 PF12464 Maltose acetyltransferase CO218_05380 PF14602 Hexapeptide repeat of succinyl-transferase CO218_05385 PF13419 Haloacid dehalogenase-like hydrolase CO218_05415 PF01471 Putative peptidoglycan binding domain CO218_05415 PF08924 Domain of unknown function (DUF1906) CO218_05420 PF00872 Transposase, Mutator family CO218_05430 PF00005 ABC transporter CO218_05490 PF00248 Aldo/keto reductase family CO218_05495 PF00005 ABC transporter CO218_05495 PF00664 ABC transporter transmembrane region CO218_05500 PF00005 ABC transporter CO218_05500 PF00664 ABC transporter transmembrane region CO218_05505 PF07690 Major Facilitator Superfamily CO218_05530 PF01022 Bacterial regulatory protein, arsR family CO218_05535 PF01223 DNA/RNA non-specific endonuclease CO218_05555 PF12848 ABC transporter CO218_05555 PF00005 ABC transporter CO218_05570 PF17755 UvrA DNA-binding domain CO218_05570 PF17760 UvrA interaction domain CO218_05570 PF00005 ABC transporter CO218_05590 PF11700 Vacuole effluxer Atg22 like CO218_05625 PF00990 Diguanylate cyclase, GGDEF domain CO218_05635 PF13936 Helix-turn-helix domain CO218_05645 PF13597 Anaerobic ribonucleoside-triphosphate reductase CO218_05645 PF03477 ATP cone domain CO218_05655 PF01327 Polypeptide deformylase CO218_05660 PF02424 ApbE family CO218_05665 PF01207 Dihydrouridine synthase (Dus) CO218_05685 PF03466 LysR substrate binding domain CO218_05685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_05690 PF00939 Sodium:sulfate symporter transmembrane region CO218_05710 PF13936 Helix-turn-helix domain CO218_05760 PF00892 EamA-like transporter family CO218_05785 PF00005 ABC transporter CO218_05795 PF13936 Helix-turn-helix domain CO218_05815 PF00480 ROK family CO218_05830 PF00881 Nitroreductase family CO218_05835 PF02378 Phosphotransferase system, EIIC CO218_05835 PF00367 phosphotransferase system, EIIB CO218_05835 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_05840 PF00005 ABC transporter CO218_05845 PF02653 Branched-chain amino acid transport system / permease component CO218_05875 PF00571 CBS domain CO218_05875 PF01368 DHH family CO218_05875 PF01743 Poly A polymerase head domain CO218_05875 PF02272 DHHA1 domain CO218_05875 PF12627 Probable RNA and SrmB- binding site of polymerase A CO218_05880 PF00005 ABC transporter CO218_05885 PF12399 Branched-chain amino acid ATP-binding cassette transporter CO218_05885 PF00005 ABC transporter CO218_05890 PF00872 Transposase, Mutator family CO218_05895 PF11862 Domain of unknown function (DUF3382) CO218_05895 PF02653 Branched-chain amino acid transport system / permease component CO218_05900 PF02653 Branched-chain amino acid transport system / permease component CO218_05905 PF13458 Periplasmic binding protein CO218_05915 PF00413 Matrixin CO218_05920 PF04138 GtrA-like protein CO218_05930 PF01566 Natural resistance-associated macrophage protein CO218_05950 PF01022 Bacterial regulatory protein, arsR family CO218_05970 PF12704 MacB-like periplasmic core domain CO218_05970 PF02687 FtsX-like permease family CO218_05970 PF00005 ABC transporter CO218_06015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_06020 PF02378 Phosphotransferase system, EIIC CO218_06025 PF00232 Glycosyl hydrolase family 1 CO218_06035 PF13411 MerR HTH family regulatory protein CO218_06040 PF06737 Transglycosylase-like domain CO218_06050 PF01464 Transglycosylase SLT domain CO218_06065 PF01297 Zinc-uptake complex component A periplasmic CO218_06090 PF11798 IMS family HHH motif CO218_06090 PF11799 impB/mucB/samB family C-terminal domain CO218_06090 PF00817 impB/mucB/samB family CO218_06095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_06095 PF03466 LysR substrate binding domain CO218_06105 PF00106 short chain dehydrogenase CO218_06150 PF00005 ABC transporter CO218_06150 PF00664 ABC transporter transmembrane region CO218_06165 PF07687 Peptidase dimerisation domain CO218_06165 PF01546 Peptidase family M20/M25/M40 CO218_06180 PF00872 Transposase, Mutator family CO218_06190 PF13520 Amino acid permease CO218_06200 PF00465 Iron-containing alcohol dehydrogenase CO218_06215 PF08240 Alcohol dehydrogenase GroES-like domain CO218_06215 PF00107 Zinc-binding dehydrogenase CO218_06220 PF00403 Heavy-metal-associated domain CO218_06275 PF00872 Transposase, Mutator family CO218_06280 PF03611 PTS system sugar-specific permease component CO218_06285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_06320 PF01209 ubiE/COQ5 methyltransferase family CO218_06325 PF00300 Histidine phosphatase superfamily (branch 1) CO218_06330 PF01594 AI-2E family transporter CO218_06335 PF00480 ROK family CO218_06345 PF00665 Integrase core domain CO218_06345 PF13276 HTH-like domain CO218_06345 PF13333 Integrase core domain CO218_06365 PF03793 PASTA domain CO218_06365 PF00069 Protein kinase domain CO218_06405 PF00583 Acetyltransferase (GNAT) family CO218_06410 PF00768 D-alanyl-D-alanine carboxypeptidase CO218_06410 PF07943 Penicillin-binding protein 5, C-terminal domain CO218_06415 PF00512 His Kinase A (phospho-acceptor) domain CO218_06415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_06420 PF00486 Transcriptional regulatory protein, C terminal CO218_06420 PF00072 Response regulator receiver domain CO218_06435 PF00571 CBS domain CO218_06435 PF00478 IMP dehydrogenase / GMP reductase domain CO218_06445 PF06071 Protein of unknown function (DUF933) CO218_06445 PF01926 50S ribosome-binding GTPase CO218_06450 PF06107 Bacterial protein of unknown function (DUF951) CO218_06455 PF17762 HTH domain found in ParB protein CO218_06455 PF02195 ParB-like nuclease domain CO218_06460 PF13614 AAA domain CO218_06465 PF02195 ParB-like nuclease domain CO218_06465 PF17762 HTH domain found in ParB protein CO218_06470 PF02527 rRNA small subunit methyltransferase G CO218_06475 PF01773 Na+ dependent nucleoside transporter N-terminus CO218_06475 PF07662 Na+ dependent nucleoside transporter C-terminus CO218_06490 PF03466 LysR substrate binding domain CO218_06490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_06495 PF00155 Aminotransferase class I and II CO218_06500 PF00497 Bacterial extracellular solute-binding proteins, family 3 CO218_06505 PF00528 Binding-protein-dependent transport system inner membrane component CO218_06510 PF00005 ABC transporter CO218_06515 PF00497 Bacterial extracellular solute-binding proteins, family 3 CO218_06540 PF02378 Phosphotransferase system, EIIC CO218_06540 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_06540 PF00367 phosphotransferase system, EIIB CO218_06545 PF00128 Alpha amylase, catalytic domain CO218_06550 PF00356 Bacterial regulatory proteins, lacI family CO218_06560 PF03649 Uncharacterised protein family (UPF0014) CO218_06565 PF00005 ABC transporter CO218_06570 PF05958 tRNA (Uracil-5-)-methyltransferase CO218_06570 PF01938 TRAM domain CO218_06615 PF03358 NADPH-dependent FMN reductase CO218_06615 PF04205 FMN-binding domain CO218_06615 PF00890 FAD binding domain CO218_06630 PF01475 Ferric uptake regulator family CO218_06635 PF08951 Enterocin A Immunity CO218_06655 PF03788 LrgA family CO218_06660 PF04172 LrgB-like family CO218_06665 PF02645 Uncharacterised protein, DegV family COG1307 CO218_06675 PF04298 Putative neutral zinc metallopeptidase CO218_06695 PF02595 Glycerate kinase family CO218_06700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_06700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_06710 PF10397 Adenylosuccinate lyase C-terminus CO218_06710 PF00206 Lyase CO218_06715 PF00709 Adenylosuccinate synthetase CO218_06720 PF00478 IMP dehydrogenase / GMP reductase domain CO218_06725 PF13350 Tyrosine phosphatase family CO218_06730 PF13396 Phospholipase_D-nuclease N-terminal CO218_06730 PF13091 PLD-like domain CO218_06745 PF06736 Protein of unknown function (DUF1211) CO218_06755 PF00872 Transposase, Mutator family CO218_06765 PF13520 Amino acid permease CO218_06770 PF02705 K+ potassium transporter CO218_06775 PF16916 Dimerisation domain of Zinc Transporter CO218_06775 PF01545 Cation efflux family CO218_06780 PF01594 AI-2E family transporter CO218_06785 PF01717 Cobalamin-independent synthase, Catalytic domain CO218_06790 PF00893 Small Multidrug Resistance protein CO218_06795 PF00893 Small Multidrug Resistance protein CO218_06800 PF03006 Haemolysin-III related CO218_06805 PF01022 Bacterial regulatory protein, arsR family CO218_06810 PF01545 Cation efflux family CO218_06835 PF13333 Integrase core domain CO218_06835 PF00665 Integrase core domain CO218_06835 PF13276 HTH-like domain CO218_06845 PF00809 Pterin binding enzyme CO218_06850 PF01725 Ham1 family CO218_06855 PF08245 Mur ligase middle domain CO218_06855 PF02875 Mur ligase family, glutamate ligase domain CO218_06860 PF01227 GTP cyclohydrolase I CO218_06865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CO218_06885 PF01297 Zinc-uptake complex component A periplasmic CO218_06920 PF00144 Beta-lactamase CO218_06925 PF01228 Glycine radical CO218_06925 PF02901 Pyruvate formate lyase-like CO218_06930 PF04055 Radical SAM superfamily CO218_06940 PF01883 Iron-sulfur cluster assembly protein CO218_06945 PF00248 Aldo/keto reductase family CO218_06970 PF02028 BCCT, betaine/carnitine/choline family transporter CO218_06975 PF00403 Heavy-metal-associated domain CO218_06985 PF04237 YjbR CO218_06995 PF13382 Adenine deaminase C-terminal domain CO218_06995 PF01979 Amidohydrolase family CO218_07000 PF01380 SIS domain CO218_07010 PF03553 Na+/H+ antiporter family CO218_07015 PF00324 Amino acid permease CO218_07030 PF00665 Integrase core domain CO218_07030 PF13276 HTH-like domain CO218_07030 PF13333 Integrase core domain CO218_07040 PF04608 Phosphatidylglycerophosphatase A CO218_07060 PF03960 ArsC family CO218_07065 PF04343 Protein of unknown function, DUF488 CO218_07075 PF00730 HhH-GPD superfamily base excision DNA repair protein CO218_07075 PF14815 NUDIX domain CO218_07090 PF00011 Hsp20/alpha crystallin family CO218_07115 PF00892 EamA-like transporter family CO218_07130 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CO218_07140 PF03965 Penicillinase repressor CO218_07190 PF07690 Major Facilitator Superfamily CO218_07195 PF13936 Helix-turn-helix domain CO218_07225 PF00690 Cation transporter/ATPase, N-terminus CO218_07225 PF00689 Cation transporting ATPase, C-terminus CO218_07230 PF00149 Calcineurin-like phosphoesterase CO218_07230 PF02872 5'-nucleotidase, C-terminal domain CO218_07240 PF00248 Aldo/keto reductase family CO218_07260 PF02673 Bacitracin resistance protein BacA CO218_07265 PF01661 Macro domain CO218_07295 PF00872 Transposase, Mutator family CO218_07335 PF00282 Pyridoxal-dependent decarboxylase conserved domain CO218_07340 PF00877 NlpC/P60 family CO218_07365 PF00872 Transposase, Mutator family CO218_07395 PF00440 Bacterial regulatory proteins, tetR family CO218_07405 PF01209 ubiE/COQ5 methyltransferase family CO218_07435 PF00403 Heavy-metal-associated domain CO218_07440 PF00230 Major intrinsic protein CO218_07445 PF00085 Thioredoxin CO218_07450 PF02583 Metal-sensitive transcriptional repressor CO218_07470 PF13545 Crp-like helix-turn-helix domain CO218_07470 PF00027 Cyclic nucleotide-binding domain CO218_07475 PF05649 Peptidase family M13 CO218_07475 PF01431 Peptidase family M13 CO218_07500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_07500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_07550 PF00230 Major intrinsic protein CO218_07555 PF03109 ABC1 family CO218_07560 PF05525 Branched-chain amino acid transport protein CO218_07565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_07570 PF08532 Beta-galactosidase trimerisation domain CO218_07570 PF08533 Beta-galactosidase C-terminal domain CO218_07570 PF02449 Beta-galactosidase CO218_07625 PF13936 Helix-turn-helix domain CO218_07625 PF00665 Integrase core domain CO218_07650 PF18543 Intracellular delivery domain CO218_07650 PF02661 Fic/DOC family CO218_07655 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA CO218_07660 PF00356 Bacterial regulatory proteins, lacI family CO218_07665 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CO218_07665 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CO218_07670 PF16363 GDP-mannose 4,6 dehydratase CO218_07675 PF00288 GHMP kinases N terminal domain CO218_07675 PF08544 GHMP kinases C terminal CO218_07675 PF10509 Galactokinase galactose-binding signature CO218_07680 PF00703 Glycosyl hydrolases family 2 CO218_07680 PF02837 Glycosyl hydrolases family 2, sugar binding domain CO218_07680 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CO218_07685 PF02929 Beta galactosidase small chain CO218_07695 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_07700 PF01263 Aldose 1-epimerase CO218_07705 PF00356 Bacterial regulatory proteins, lacI family CO218_07720 PF03358 NADPH-dependent FMN reductase CO218_07720 PF04205 FMN-binding domain CO218_07720 PF00890 FAD binding domain CO218_07725 PF02424 ApbE family CO218_07730 PF01487 Type I 3-dehydroquinase CO218_07735 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CO218_07735 PF08501 Shikimate dehydrogenase substrate binding domain CO218_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_07740 PF03466 LysR substrate binding domain CO218_07750 PF08501 Shikimate dehydrogenase substrate binding domain CO218_07750 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CO218_07755 PF08501 Shikimate dehydrogenase substrate binding domain CO218_07755 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CO218_07770 PF03466 LysR substrate binding domain CO218_07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_07775 PF07690 Major Facilitator Superfamily CO218_07800 PF13276 HTH-like domain CO218_07800 PF00665 Integrase core domain CO218_07800 PF13333 Integrase core domain CO218_07825 PF04226 Transglycosylase associated protein CO218_07830 PF06628 Catalase-related immune-responsive CO218_07830 PF00199 Catalase CO218_07835 PF03960 ArsC family CO218_07840 PF04397 LytTr DNA-binding domain CO218_07840 PF00072 Response regulator receiver domain CO218_07855 PF04647 Accessory gene regulator B CO218_07860 PF07724 AAA domain (Cdc48 subfamily) CO218_07860 PF00004 ATPase family associated with various cellular activities (AAA) CO218_07860 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_07860 PF17871 AAA lid domain CO218_07900 PF00106 short chain dehydrogenase CO218_07905 PF06800 Sugar transport protein CO218_07910 PF05025 RbsD / FucU transport protein family CO218_07915 PF00294 pfkB family carbohydrate kinase CO218_07915 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CO218_07920 PF00356 Bacterial regulatory proteins, lacI family CO218_07925 PF00171 Aldehyde dehydrogenase family CO218_07925 PF00465 Iron-containing alcohol dehydrogenase CO218_07935 PF03551 Transcriptional regulator PadR-like family CO218_07935 PF10400 Virulence activator alpha C-term CO218_07940 PF05870 Phenolic acid decarboxylase (PAD) CO218_07955 PF02645 Uncharacterised protein, DegV family COG1307 CO218_07965 PF03051 Peptidase C1-like family CO218_07970 PF10502 Signal peptidase, peptidase S26 CO218_08005 PF13932 GidA associated domain CO218_08005 PF01134 Glucose inhibited division protein A CO218_08010 PF10396 GTP-binding protein TrmE N-terminus CO218_08010 PF12631 MnmE helical domain CO218_08010 PF01926 50S ribosome-binding GTPase CO218_08015 PF01424 R3H domain CO218_08015 PF14804 Jag N-terminus CO218_08020 PF02096 60Kd inner membrane protein CO218_08025 PF00825 Ribonuclease P CO218_08030 PF00468 Ribosomal protein L34 CO218_08035 PF08299 Bacterial dnaA protein helix-turn-helix CO218_08035 PF11638 DnaA N-terminal domain CO218_08035 PF00308 Bacterial dnaA protein CO218_08040 PF02768 DNA polymerase III beta subunit, C-terminal domain CO218_08040 PF02767 DNA polymerase III beta subunit, central domain CO218_08040 PF00712 DNA polymerase III beta subunit, N-terminal domain CO218_08050 PF02463 RecF/RecN/SMC N terminal domain CO218_08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_08055 PF00986 DNA gyrase B subunit, carboxyl terminus CO218_08055 PF00204 DNA gyrase B CO218_08055 PF01751 Toprim domain CO218_08060 PF03989 DNA gyrase C-terminal domain, beta-propeller CO218_08060 PF00521 DNA gyrase/topoisomerase IV, subunit A CO218_08065 PF01250 Ribosomal protein S6 CO218_08070 PF00436 Single-strand binding protein family CO218_08075 PF01084 Ribosomal protein S18 CO218_08080 PF02272 DHHA1 domain CO218_08080 PF01368 DHH family CO218_08085 PF03948 Ribosomal protein L9, C-terminal domain CO218_08085 PF01281 Ribosomal protein L9, N-terminal domain CO218_08090 PF03796 DnaB-like helicase C terminal domain CO218_08090 PF00772 DnaB-like helicase N terminal domain CO218_08095 PF07690 Major Facilitator Superfamily CO218_08100 PF00696 Amino acid kinase family CO218_08105 PF00171 Aldehyde dehydrogenase family CO218_08110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_08120 PF00128 Alpha amylase, catalytic domain CO218_08120 PF02806 Alpha amylase, C-terminal all-beta domain CO218_08120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CO218_08125 PF00483 Nucleotidyl transferase CO218_08130 PF00483 Nucleotidyl transferase CO218_08135 PF00534 Glycosyl transferases group 1 CO218_08135 PF08323 Starch synthase catalytic domain CO218_08155 PF13419 Haloacid dehalogenase-like hydrolase CO218_08160 PF03633 Glycosyl hydrolase family 65, C-terminal domain CO218_08160 PF03632 Glycosyl hydrolase family 65 central catalytic domain CO218_08160 PF03636 Glycosyl hydrolase family 65, N-terminal domain CO218_08170 PF00313 'Cold-shock' DNA-binding domain CO218_08185 PF00072 Response regulator receiver domain CO218_08185 PF00486 Transcriptional regulatory protein, C terminal CO218_08190 PF13426 PAS domain CO218_08190 PF14827 Double sensory domain of two-component sensor kinase CO218_08190 PF00672 HAMP domain CO218_08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_08190 PF00512 His Kinase A (phospho-acceptor) domain CO218_08200 PF09648 YycH protein CO218_08205 PF00753 Metallo-beta-lactamase superfamily CO218_08210 PF13180 PDZ domain CO218_08215 PF02590 Predicted SPOUT methyltransferase CO218_08260 PF01451 Low molecular weight phosphotyrosine protein phosphatase CO218_08275 PF00881 Nitroreductase family CO218_08280 PF17853 GGDEF-like domain CO218_08280 PF13556 PucR C-terminal helix-turn-helix domain CO218_08280 PF07905 Purine catabolism regulatory protein-like family CO218_08290 PF13419 Haloacid dehalogenase-like hydrolase CO218_08295 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CO218_08305 PF13350 Tyrosine phosphatase family CO218_08330 PF02525 Flavodoxin-like fold CO218_08335 PF14492 Elongation Factor G, domain II CO218_08335 PF03764 Elongation factor G, domain IV CO218_08335 PF00009 Elongation factor Tu GTP binding domain CO218_08335 PF00679 Elongation factor G C-terminus CO218_08360 PF08240 Alcohol dehydrogenase GroES-like domain CO218_08360 PF00107 Zinc-binding dehydrogenase CO218_08370 PF01554 MatE CO218_08385 PF00561 alpha/beta hydrolase fold CO218_08390 PF03883 Peroxide stress protein YaaA CO218_08400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_08425 PF00005 ABC transporter CO218_08430 PF02361 Cobalt transport protein CO218_08435 PF13190 PDGLE domain CO218_08435 PF01891 Cobalt uptake substrate-specific transmembrane region CO218_08440 PF13545 Crp-like helix-turn-helix domain CO218_08445 PF09861 Lactate racemase N-terminal domain CO218_08450 PF00731 AIR carboxylase CO218_08455 PF01969 Protein of unknown function DUF111 CO218_08460 PF01969 Protein of unknown function DUF111 CO218_08465 PF00230 Major intrinsic protein CO218_08470 PF02540 NAD synthase CO218_08475 PF00550 Phosphopantetheine attachment site CO218_08475 PF08659 KR domain CO218_08475 PF08240 Alcohol dehydrogenase GroES-like domain CO218_08475 PF00698 Acyl transferase domain CO218_08475 PF14765 Polyketide synthase dehydratase CO218_08480 PF02110 Hydroxyethylthiazole kinase family CO218_08485 PF08543 Phosphomethylpyrimidine kinase CO218_08490 PF02581 Thiamine monophosphate synthase CO218_08500 PF07722 Peptidase C26 CO218_08510 PF00293 NUDIX domain CO218_08510 PF13344 Haloacid dehalogenase-like hydrolase CO218_08515 PF00324 Amino acid permease CO218_08525 PF00561 alpha/beta hydrolase fold CO218_08530 PF00689 Cation transporting ATPase, C-terminus CO218_08530 PF00690 Cation transporter/ATPase, N-terminus CO218_08535 PF04024 PspC domain CO218_08550 PF00011 Hsp20/alpha crystallin family CO218_08565 PF07690 Major Facilitator Superfamily CO218_08565 PF00083 Sugar (and other) transporter CO218_08575 PF07690 Major Facilitator Superfamily CO218_08580 PF00248 Aldo/keto reductase family CO218_08595 PF06100 MCRA family CO218_08610 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CO218_08615 PF02361 Cobalt transport protein CO218_08620 PF00005 ABC transporter CO218_08620 PF12558 ATP-binding cassette cobalt transporter CO218_08625 PF07155 ECF-type riboflavin transporter, S component CO218_08635 PF00392 Bacterial regulatory proteins, gntR family CO218_08635 PF07702 UTRA domain CO218_08660 PF00106 short chain dehydrogenase CO218_08665 PF13732 Domain of unknown function (DUF4162) CO218_08665 PF00005 ABC transporter CO218_08680 PF00766 Electron transfer flavoprotein FAD-binding domain CO218_08680 PF01012 Electron transfer flavoprotein domain CO218_08685 PF12822 ECF transporter, substrate-specific component CO218_08690 PF00440 Bacterial regulatory proteins, tetR family CO218_08690 PF14278 Transcriptional regulator C-terminal region CO218_08695 PF02733 Dak1 domain CO218_08700 PF02733 Dak1 domain CO218_08705 PF02734 DAK2 domain CO218_08710 PF03610 PTS system fructose IIA component CO218_08715 PF00230 Major intrinsic protein CO218_08720 PF00356 Bacterial regulatory proteins, lacI family CO218_08725 PF00356 Bacterial regulatory proteins, lacI family CO218_08730 PF00128 Alpha amylase, catalytic domain CO218_08735 PF13416 Bacterial extracellular solute-binding protein CO218_08740 PF00528 Binding-protein-dependent transport system inner membrane component CO218_08745 PF00528 Binding-protein-dependent transport system inner membrane component CO218_08755 PF11896 Domain of unknown function (DUF3416) CO218_08755 PF00128 Alpha amylase, catalytic domain CO218_08760 PF00005 ABC transporter CO218_08760 PF17912 MalK OB fold domain CO218_08760 PF03459 TOBE domain CO218_08765 PF03636 Glycosyl hydrolase family 65, N-terminal domain CO218_08765 PF03633 Glycosyl hydrolase family 65, C-terminal domain CO218_08765 PF03632 Glycosyl hydrolase family 65 central catalytic domain CO218_08780 PF00480 ROK family CO218_08805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_08810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_08820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CO218_08820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CO218_08820 PF01842 ACT domain CO218_08825 PF00266 Aminotransferase class-V CO218_08830 PF00300 Histidine phosphatase superfamily (branch 1) CO218_08835 PF00248 Aldo/keto reductase family CO218_08850 PF05670 NFACT protein RNA binding domain CO218_08855 PF00871 Acetokinase family CO218_08880 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CO218_08885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CO218_08890 PF00005 ABC transporter CO218_08890 PF12848 ABC transporter CO218_08900 PF00005 ABC transporter CO218_08910 PF00255 Glutathione peroxidase CO218_08915 PF00248 Aldo/keto reductase family CO218_08920 PF01272 Transcription elongation factor, GreA/GreB, C-term CO218_08920 PF03449 Transcription elongation factor, N-terminal CO218_08935 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CO218_08940 PF03577 Peptidase family C69 CO218_08945 PF02378 Phosphotransferase system, EIIC CO218_08945 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_08955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CO218_08960 PF01232 Mannitol dehydrogenase Rossmann domain CO218_08960 PF08125 Mannitol dehydrogenase C-terminal domain CO218_08970 PF00085 Thioredoxin CO218_08990 PF00334 Nucleoside diphosphate kinase CO218_09000 PF03358 NADPH-dependent FMN reductase CO218_09005 PF00392 Bacterial regulatory proteins, gntR family CO218_09005 PF07702 UTRA domain CO218_09015 PF02378 Phosphotransferase system, EIIC CO218_09030 PF01979 Amidohydrolase family CO218_09035 PF03841 L-seryl-tRNA selenium transferase CO218_09055 PF00132 Bacterial transferase hexapeptide (six repeats) CO218_09060 PF01053 Cys/Met metabolism PLP-dependent enzyme CO218_09065 PF00291 Pyridoxal-phosphate dependent enzyme CO218_09070 PF00557 Metallopeptidase family M24 CO218_09095 PF07702 UTRA domain CO218_09095 PF00392 Bacterial regulatory proteins, gntR family CO218_09110 PF02378 Phosphotransferase system, EIIC CO218_09110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_09110 PF00367 phosphotransferase system, EIIB CO218_09120 PF02441 Flavoprotein CO218_09130 PF02082 Transcriptional regulator CO218_09135 PF00440 Bacterial regulatory proteins, tetR family CO218_09140 PF01566 Natural resistance-associated macrophage protein CO218_09160 PF07690 Major Facilitator Superfamily CO218_09170 PF13936 Helix-turn-helix domain CO218_09175 PF00512 His Kinase A (phospho-acceptor) domain CO218_09175 PF18719 ArlS sensor domain CO218_09175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_09180 PF00486 Transcriptional regulatory protein, C terminal CO218_09180 PF00072 Response regulator receiver domain CO218_09190 PF01418 Helix-turn-helix domain, rpiR family CO218_09190 PF01380 SIS domain CO218_09195 PF02378 Phosphotransferase system, EIIC CO218_09210 PF03816 Cell envelope-related transcriptional attenuator domain CO218_09215 PF01565 FAD binding domain CO218_09215 PF02913 FAD linked oxidases, C-terminal domain CO218_09225 PF04607 Region found in RelA / SpoT proteins CO218_09235 PF03176 MMPL family CO218_09235 PF03176 MMPL family CO218_09240 PF03352 Methyladenine glycosylase CO218_09250 PF02687 FtsX-like permease family CO218_09250 PF12704 MacB-like periplasmic core domain CO218_09255 PF00005 ABC transporter CO218_09270 PF06737 Transglycosylase-like domain CO218_09285 PF01476 LysM domain CO218_09285 PF05257 CHAP domain CO218_09315 PF00871 Acetokinase family CO218_09325 PF01047 MarR family CO218_09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_09340 PF13416 Bacterial extracellular solute-binding protein CO218_09355 PF00005 ABC transporter CO218_09355 PF08402 TOBE domain CO218_09385 PF00392 Bacterial regulatory proteins, gntR family CO218_09390 PF00005 ABC transporter CO218_09410 PF00465 Iron-containing alcohol dehydrogenase CO218_09410 PF00171 Aldehyde dehydrogenase family CO218_09415 PF01116 Fructose-bisphosphate aldolase class-II CO218_09445 PF02632 BioY family CO218_09460 PF00155 Aminotransferase class I and II CO218_09470 PF01061 ABC-2 type transporter CO218_09475 PF00005 ABC transporter CO218_09495 PF07690 Major Facilitator Superfamily CO218_09505 PF13333 Integrase core domain CO218_09505 PF13276 HTH-like domain CO218_09505 PF00665 Integrase core domain CO218_09510 PF00909 Ammonium Transporter Family CO218_09515 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_09515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_09530 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CO218_09535 PF07731 Multicopper oxidase CO218_09535 PF07732 Multicopper oxidase CO218_09540 PF06993 Protein of unknown function (DUF1304) CO218_09545 PF01161 Phosphatidylethanolamine-binding protein CO218_09575 PF01156 Inosine-uridine preferring nucleoside hydrolase CO218_09580 PF00106 short chain dehydrogenase CO218_09590 PF00075 RNase H CO218_09595 PF00528 Binding-protein-dependent transport system inner membrane component CO218_09600 PF00005 ABC transporter CO218_09605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_09605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_09610 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CO218_09610 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CO218_09615 PF01266 FAD dependent oxidoreductase CO218_09615 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CO218_09655 PF03412 Peptidase C39 family CO218_09655 PF00005 ABC transporter CO218_09655 PF00664 ABC transporter transmembrane region CO218_09700 PF01381 Helix-turn-helix CO218_09705 PF13538 UvrD-like helicase C-terminal domain CO218_09710 PF00795 Carbon-nitrogen hydrolase CO218_09715 PF00579 tRNA synthetases class I (W and Y) CO218_09720 PF00392 Bacterial regulatory proteins, gntR family CO218_09720 PF07702 UTRA domain CO218_09740 PF02378 Phosphotransferase system, EIIC CO218_09745 PF00232 Glycosyl hydrolase family 1 CO218_09750 PF00480 ROK family CO218_09755 PF01380 SIS domain CO218_09755 PF01418 Helix-turn-helix domain, rpiR family CO218_09760 PF01207 Dihydrouridine synthase (Dus) CO218_09765 PF02541 Ppx/GppA phosphatase family CO218_09770 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CO218_09780 PF02146 Sir2 family CO218_09785 PF01904 Protein of unknown function DUF72 CO218_09795 PF01588 Putative tRNA binding domain CO218_09795 PF08264 Anticodon-binding domain of tRNA CO218_09795 PF09334 tRNA synthetases class I (M) CO218_09800 PF13276 HTH-like domain CO218_09800 PF13333 Integrase core domain CO218_09800 PF00665 Integrase core domain CO218_09810 PF07690 Major Facilitator Superfamily CO218_09825 PF01026 TatD related DNase CO218_09830 PF13331 Domain of unknown function (DUF4093) CO218_09835 PF00398 Ribosomal RNA adenine dimethylase CO218_09840 PF06257 Biofilm formation stimulator VEG CO218_09845 PF00288 GHMP kinases N terminal domain CO218_09845 PF08544 GHMP kinases C terminal CO218_09855 PF00005 ABC transporter CO218_09860 PF00950 ABC 3 transport family CO218_09880 PF00156 Phosphoribosyl transferase domain CO218_09880 PF09182 Bacterial purine repressor, N-terminal CO218_09885 PF00483 Nucleotidyl transferase CO218_09885 PF00132 Bacterial transferase hexapeptide (six repeats) CO218_09895 PF14572 Phosphoribosyl synthetase-associated domain CO218_09895 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CO218_09920 PF01966 HD domain CO218_09925 PF03099 Biotin/lipoate A/B protein ligase family CO218_09935 PF05066 HB1, ASXL, restriction endonuclease HTH domain CO218_09940 PF06418 CTP synthase N-terminus CO218_09940 PF00117 Glutamine amidotransferase class-I CO218_09945 PF02403 Seryl-tRNA synthetase N-terminal domain CO218_09945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CO218_09960 PF03315 Serine dehydratase beta chain CO218_09960 PF01842 ACT domain CO218_09965 PF03313 Serine dehydratase alpha chain CO218_09980 PF00872 Transposase, Mutator family CO218_09995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CO218_10000 PF07498 Rho termination factor, N-terminal domain CO218_10000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CO218_10000 PF07497 Rho termination factor, RNA-binding domain CO218_10005 PF01197 Ribosomal protein L31 CO218_10015 PF04203 Sortase domain CO218_10020 PF04011 LemA family CO218_10025 PF01435 Peptidase family M48 CO218_10035 PF02875 Mur ligase family, glutamate ligase domain CO218_10035 PF08245 Mur ligase middle domain CO218_10035 PF01225 Mur ligase family, catalytic domain CO218_10040 PF00271 Helicase conserved C-terminal domain CO218_10040 PF00270 DEAD/DEAH box helicase CO218_10055 PF01648 4'-phosphopantetheinyl transferase superfamily CO218_10060 PF01168 Alanine racemase, N-terminal domain CO218_10060 PF00842 Alanine racemase, C-terminal domain CO218_10070 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CO218_10090 PF00005 ABC transporter CO218_10095 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CO218_10095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_10100 PF00117 Glutamine amidotransferase class-I CO218_10100 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CO218_10110 PF01960 ArgJ family CO218_10115 PF00696 Amino acid kinase family CO218_10120 PF00202 Aminotransferase class-III CO218_10125 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CO218_10125 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CO218_10145 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_10145 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_10150 PF01195 Peptidyl-tRNA hydrolase CO218_10155 PF00270 DEAD/DEAH box helicase CO218_10155 PF00271 Helicase conserved C-terminal domain CO218_10155 PF03461 TRCF domain CO218_10155 PF02559 CarD-like/TRCF domain CO218_10155 PF17757 UvrB interaction domain CO218_10160 PF01943 Polysaccharide biosynthesis protein CO218_10160 PF14667 Polysaccharide biosynthesis C-terminal domain CO218_10165 PF01479 S4 domain CO218_10175 PF00575 S1 RNA binding domain CO218_10180 PF01171 PP-loop family CO218_10180 PF11734 TilS substrate C-terminal domain CO218_10185 PF11734 TilS substrate C-terminal domain CO218_10185 PF01171 PP-loop family CO218_10185 PF00156 Phosphoribosyl transferase domain CO218_10190 PF17862 AAA+ lid domain CO218_10190 PF00004 ATPase family associated with various cellular activities (AAA) CO218_10190 PF06480 FtsH Extracellular CO218_10190 PF01434 Peptidase family M41 CO218_10195 PF01430 Hsp33 protein CO218_10205 PF00152 tRNA synthetases class II (D, K and N) CO218_10205 PF01336 OB-fold nucleic acid binding domain CO218_10245 PF00854 POT family CO218_10295 PF14748 Pyrroline-5-carboxylate reductase dimerisation CO218_10295 PF03807 NADP oxidoreductase coenzyme F420-dependent CO218_10300 PF13382 Adenine deaminase C-terminal domain CO218_10300 PF01979 Amidohydrolase family CO218_10305 PF00392 Bacterial regulatory proteins, gntR family CO218_10305 PF07702 UTRA domain CO218_10310 PF03808 Glycosyl transferase WecB/TagA/CpsF family CO218_10315 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CO218_10315 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CO218_10315 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CO218_10320 PF02540 NAD synthase CO218_10325 PF00690 Cation transporter/ATPase, N-terminus CO218_10325 PF00689 Cation transporting ATPase, C-terminus CO218_10335 PF09371 Tex-like protein N-terminal domain CO218_10335 PF16921 Tex protein YqgF-like domain CO218_10335 PF17674 HHH domain CO218_10335 PF00575 S1 RNA binding domain CO218_10340 PF10263 SprT-like family CO218_10345 PF03447 Homoserine dehydrogenase, NAD binding domain CO218_10345 PF00742 Homoserine dehydrogenase CO218_10345 PF01842 ACT domain CO218_10350 PF00288 GHMP kinases N terminal domain CO218_10350 PF08544 GHMP kinases C terminal CO218_10365 PF03830 PTS system sorbose subfamily IIB component CO218_10365 PF03610 PTS system fructose IIA component CO218_10370 PF03609 PTS system sorbose-specific iic component CO218_10375 PF03613 PTS system mannose/fructose/sorbose family IID component CO218_10385 PF03610 PTS system fructose IIA component CO218_10385 PF00158 Sigma-54 interaction domain CO218_10385 PF00874 PRD domain CO218_10390 PF03830 PTS system sorbose subfamily IIB component CO218_10390 PF03610 PTS system fructose IIA component CO218_10395 PF03610 PTS system fructose IIA component CO218_10395 PF03830 PTS system sorbose subfamily IIB component CO218_10400 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CO218_10400 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CO218_10410 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_10410 PF00289 Biotin carboxylase, N-terminal domain CO218_10410 PF02785 Biotin carboxylase C-terminal domain CO218_10415 PF01039 Carboxyl transferase domain CO218_10420 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CO218_10425 PF03816 Cell envelope-related transcriptional attenuator domain CO218_10440 PF00892 EamA-like transporter family CO218_10445 PF00300 Histidine phosphatase superfamily (branch 1) CO218_10455 PF13276 HTH-like domain CO218_10455 PF00665 Integrase core domain CO218_10455 PF13333 Integrase core domain CO218_10465 PF03051 Peptidase C1-like family CO218_10470 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CO218_10480 PF00692 dUTPase CO218_10495 PF18073 Rubredoxin metal binding domain CO218_10505 PF00749 tRNA synthetases class I (E and Q), catalytic domain CO218_10510 PF01406 tRNA synthetases class I (C) catalytic domain CO218_10510 PF09190 DALR domain CO218_10515 PF00636 Ribonuclease III domain CO218_10520 PF00588 SpoU rRNA Methylase family CO218_10520 PF08032 RNA 2'-O ribose methyltransferase substrate binding CO218_10535 PF00471 Ribosomal protein L33 CO218_10545 PF00467 KOW motif CO218_10545 PF02357 Transcription termination factor nusG CO218_10555 PF03946 Ribosomal protein L11, N-terminal domain CO218_10555 PF00298 Ribosomal protein L11, RNA binding domain CO218_10560 PF00687 Ribosomal protein L1p/L10e family CO218_10565 PF00466 Ribosomal protein L10 CO218_10570 PF16320 Ribosomal protein L7/L12 dimerisation domain CO218_10570 PF00542 Ribosomal protein L7/L12 C-terminal domain CO218_10585 PF09924 Uncharacterised conserved protein (DUF2156) CO218_10585 PF03706 Lysylphosphatidylglycerol synthase TM region CO218_10595 PF03641 Possible lysine decarboxylase CO218_10600 PF00268 Ribonucleotide reductase, small chain CO218_10605 PF08343 Ribonucleotide reductase N-terminal CO218_10605 PF00317 Ribonucleotide reductase, all-alpha domain CO218_10605 PF02867 Ribonucleotide reductase, barrel domain CO218_10610 PF00462 Glutaredoxin CO218_10615 PF05175 Methyltransferase small domain CO218_10620 PF14437 MafB19-like deaminase CO218_10630 PF12169 DNA polymerase III subunits gamma and tau domain III CO218_10635 PF02575 YbaB/EbfC DNA-binding family CO218_10640 PF13662 Toprim domain CO218_10640 PF02132 RecR protein CO218_10650 PF02223 Thymidylate kinase CO218_10655 PF06153 Cyclic-di-AMP receptor CO218_10660 PF09115 DNA polymerase III, delta subunit, C terminal CO218_10665 PF06156 Initiation control protein YabA CO218_10670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CO218_10680 PF16363 GDP-mannose 4,6 dehydratase CO218_10685 PF00266 Aminotransferase class-V CO218_10690 PF13419 Haloacid dehalogenase-like hydrolase CO218_10695 PF00528 Binding-protein-dependent transport system inner membrane component CO218_10700 PF00528 Binding-protein-dependent transport system inner membrane component CO218_10705 PF00005 ABC transporter CO218_10715 PF00814 Glycoprotease family CO218_10720 PF00583 Acetyltransferase (GNAT) family CO218_10725 PF00583 Acetyltransferase (GNAT) family CO218_10730 PF00814 Glycoprotease family CO218_10740 PF16326 ABC transporter C-terminal domain CO218_10740 PF00005 ABC transporter CO218_10740 PF12848 ABC transporter CO218_10745 PF06971 Putative DNA-binding protein N-terminus CO218_10745 PF02629 CoA binding domain CO218_10750 PF02517 CPBP intramembrane metalloprotease CO218_10755 PF00166 Chaperonin 10 Kd subunit CO218_10760 PF00118 TCP-1/cpn60 chaperonin family CO218_10765 PF13520 Amino acid permease CO218_10770 PF00953 Glycosyl transferase family 4 CO218_10775 PF12849 PBP superfamily domain CO218_10780 PF13333 Integrase core domain CO218_10780 PF00665 Integrase core domain CO218_10780 PF13276 HTH-like domain CO218_10790 PF01205 Uncharacterized protein family UPF0029 CO218_10790 PF09186 Domain of unknown function (DUF1949) CO218_10795 PF04851 Type III restriction enzyme, res subunit CO218_10795 PF00271 Helicase conserved C-terminal domain CO218_10805 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CO218_10805 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CO218_10810 PF07517 SecA DEAD-like domain CO218_10810 PF01043 SecA preprotein cross-linking domain CO218_10810 PF07516 SecA Wing and Scaffold domain CO218_10820 PF17820 PDZ domain CO218_10825 PF00072 Response regulator receiver domain CO218_10825 PF00486 Transcriptional regulatory protein, C terminal CO218_10830 PF00989 PAS fold CO218_10830 PF16736 Single Cache-like CO218_10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_10830 PF00512 His Kinase A (phospho-acceptor) domain CO218_10835 PF12849 PBP superfamily domain CO218_10840 PF00528 Binding-protein-dependent transport system inner membrane component CO218_10845 PF00528 Binding-protein-dependent transport system inner membrane component CO218_10850 PF00005 ABC transporter CO218_10855 PF00005 ABC transporter CO218_10860 PF01895 PhoU domain CO218_10865 PF04024 PspC domain CO218_10870 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CO218_10875 PF02603 HPr Serine kinase N terminus CO218_10875 PF07475 HPr Serine kinase C-terminal domain CO218_10880 PF01790 Prolipoprotein diacylglyceryl transferase CO218_10885 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CO218_10885 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CO218_10890 PF00483 Nucleotidyl transferase CO218_10905 PF13936 Helix-turn-helix domain CO218_10945 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_10960 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CO218_10960 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CO218_10960 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CO218_10960 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CO218_10970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_10970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_10980 PF07690 Major Facilitator Superfamily CO218_10990 PF02151 UvrB/uvrC motif CO218_10990 PF04851 Type III restriction enzyme, res subunit CO218_10990 PF17757 UvrB interaction domain CO218_10990 PF00271 Helicase conserved C-terminal domain CO218_10990 PF12344 Ultra-violet resistance protein B CO218_10995 PF00005 ABC transporter CO218_10995 PF17760 UvrA interaction domain CO218_10995 PF17755 UvrA DNA-binding domain CO218_11000 PF02664 S-Ribosylhomocysteinase (LuxS) CO218_11005 PF00764 Arginosuccinate synthase CO218_11010 PF14698 Argininosuccinate lyase C-terminal CO218_11010 PF00206 Lyase CO218_11020 PF03668 P-loop ATPase protein family CO218_11025 PF01933 Uncharacterised protein family UPF0052 CO218_11030 PF02650 WhiA C-terminal HTH domain CO218_11030 PF14527 WhiA LAGLIDADG-like domain CO218_11030 PF10298 WhiA N-terminal LAGLIDADG-like domain CO218_11035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_11040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CO218_11040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CO218_11045 PF00574 Clp protease CO218_11055 PF00309 Sigma-54 factor, Activator interacting domain (AID) CO218_11055 PF04552 Sigma-54, DNA binding domain CO218_11055 PF04963 Sigma-54 factor, core binding domain CO218_11060 PF04198 Putative sugar-binding domain CO218_11065 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CO218_11065 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CO218_11070 PF00162 Phosphoglycerate kinase CO218_11075 PF00121 Triosephosphate isomerase CO218_11080 PF03952 Enolase, N-terminal domain CO218_11080 PF00113 Enolase, C-terminal TIM barrel domain CO218_11095 PF00654 Voltage gated chloride channel CO218_11100 PF03840 Preprotein translocase SecG subunit CO218_11105 PF12146 Serine aminopeptidase, S33 CO218_11110 PF08206 Ribonuclease B OB domain CO218_11110 PF17876 Cold shock domain CO218_11110 PF00773 RNB domain CO218_11110 PF00575 S1 RNA binding domain CO218_11115 PF01668 SmpB protein CO218_11130 PF00528 Binding-protein-dependent transport system inner membrane component CO218_11135 PF00005 ABC transporter CO218_11150 PF03167 Uracil DNA glycosylase superfamily CO218_11155 PF01515 Phosphate acetyl/butaryl transferase CO218_11160 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CO218_11170 PF00929 Exonuclease CO218_11170 PF14480 DNA polymerase III polC-type N-terminus I CO218_11170 PF14579 Helix-hairpin-helix motif CO218_11170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CO218_11170 PF07733 Bacterial DNA polymerase III alpha NTPase domain CO218_11170 PF11490 DNA polymerase III polC-type N-terminus II CO218_11170 PF02811 PHP domain CO218_11175 PF03372 Endonuclease/Exonuclease/phosphatase family CO218_11180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CO218_11185 PF01565 FAD binding domain CO218_11185 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CO218_11190 PF00999 Sodium/hydrogen exchanger family CO218_11205 PF02457 DisA bacterial checkpoint controller nucleotide-binding CO218_11215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CO218_11215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CO218_11215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CO218_11215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CO218_11230 PF00005 ABC transporter CO218_11235 PF00872 Transposase, Mutator family CO218_11245 PF03551 Transcriptional regulator PadR-like family CO218_11255 PF13936 Helix-turn-helix domain CO218_11280 PF01380 SIS domain CO218_11300 PF01263 Aldose 1-epimerase CO218_11315 PF00881 Nitroreductase family CO218_11345 PF03960 ArsC family CO218_11360 PF07690 Major Facilitator Superfamily CO218_11365 PF02541 Ppx/GppA phosphatase family CO218_11370 PF13089 Polyphosphate kinase N-terminal domain CO218_11370 PF17941 Polyphosphate kinase C-terminal domain 1 CO218_11370 PF02503 Polyphosphate kinase middle domain CO218_11370 PF13090 Polyphosphate kinase C-terminal domain 2 CO218_11380 PF04991 LicD family CO218_11395 PF00860 Permease family CO218_11405 PF06574 FAD synthetase CO218_11405 PF01687 Riboflavin kinase CO218_11410 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO218_11410 PF00205 Thiamine pyrophosphate enzyme, central domain CO218_11410 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO218_11415 PF00561 alpha/beta hydrolase fold CO218_11425 PF01757 Acyltransferase family CO218_11430 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CO218_11430 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CO218_11430 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CO218_11445 PF13520 Amino acid permease CO218_11460 PF00293 NUDIX domain CO218_11460 PF03099 Biotin/lipoate A/B protein ligase family CO218_11470 PF00625 Guanylate kinase CO218_11475 PF01475 Ferric uptake regulator family CO218_11490 PF13419 Haloacid dehalogenase-like hydrolase CO218_11495 PF00155 Aminotransferase class I and II CO218_11500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CO218_11500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CO218_11515 PF00005 ABC transporter CO218_11520 PF00497 Bacterial extracellular solute-binding proteins, family 3 CO218_11525 PF00528 Binding-protein-dependent transport system inner membrane component CO218_11530 PF00528 Binding-protein-dependent transport system inner membrane component CO218_11535 PF02378 Phosphotransferase system, EIIC CO218_11535 PF00367 phosphotransferase system, EIIB CO218_11535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CO218_11545 PF02378 Phosphotransferase system, EIIC CO218_11545 PF00367 phosphotransferase system, EIIB CO218_11550 PF04794 YdjC-like protein CO218_11555 PF13520 Amino acid permease CO218_11565 PF01047 MarR family CO218_11595 PF01926 50S ribosome-binding GTPase CO218_11595 PF16360 GTP-binding GTPase Middle Region CO218_11595 PF13167 GTP-binding GTPase N-terminal CO218_11600 PF00293 NUDIX domain CO218_11600 PF13344 Haloacid dehalogenase-like hydrolase CO218_11610 PF00300 Histidine phosphatase superfamily (branch 1) CO218_11615 PF00300 Histidine phosphatase superfamily (branch 1) CO218_11620 PF02254 TrkA-N domain CO218_11620 PF00999 Sodium/hydrogen exchanger family CO218_11620 PF02080 TrkA-C domain CO218_11625 PF13673 Acetyltransferase (GNAT) domain CO218_11625 PF04229 GrpB protein CO218_11630 PF09335 SNARE associated Golgi protein CO218_11635 PF13538 UvrD-like helicase C-terminal domain CO218_11640 PF03060 Nitronate monooxygenase CO218_11645 PF00485 Phosphoribulokinase / Uridine kinase family CO218_11650 PF00958 GMP synthase C terminal domain CO218_11650 PF02540 NAD synthase CO218_11650 PF00117 Glutamine amidotransferase class-I CO218_11665 PF02517 CPBP intramembrane metalloprotease CO218_11670 PF01638 HxlR-like helix-turn-helix CO218_11675 PF07690 Major Facilitator Superfamily CO218_11685 PF01381 Helix-turn-helix CO218_11715 PF01757 Acyltransferase family CO218_11720 PF04226 Transglycosylase associated protein CO218_11735 PF03780 Asp23 family, cell envelope-related function CO218_11760 PF13936 Helix-turn-helix domain CO218_11785 PF01433 Peptidase family M1 domain CO218_11785 PF11838 ERAP1-like C-terminal domain CO218_11805 PF13276 HTH-like domain CO218_11805 PF00665 Integrase core domain CO218_11805 PF13333 Integrase core domain CO218_11810 PF13936 Helix-turn-helix domain CO218_11810 PF00665 Integrase core domain CO218_11825 PF06458 MucBP domain CO218_11835 PF13333 Integrase core domain CO218_11835 PF13276 HTH-like domain CO218_11835 PF00665 Integrase core domain CO218_11860 PF03466 LysR substrate binding domain CO218_11860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_11865 PF14537 Cytochrome c3 CO218_11865 PF00890 FAD binding domain CO218_11870 PF13333 Integrase core domain CO218_11870 PF00665 Integrase core domain CO218_11870 PF13276 HTH-like domain CO218_11890 PF00152 tRNA synthetases class II (D, K and N) CO218_11890 PF01336 OB-fold nucleic acid binding domain CO218_11895 PF03590 Aspartate-ammonia ligase CO218_11900 PF03577 Peptidase family C69 CO218_11920 PF00270 DEAD/DEAH box helicase CO218_11920 PF00271 Helicase conserved C-terminal domain CO218_11920 PF00570 HRDC domain CO218_11920 PF16124 RecQ zinc-binding CO218_11920 PF09382 RQC domain CO218_11925 PF00849 RNA pseudouridylate synthase CO218_11930 PF01022 Bacterial regulatory protein, arsR family CO218_11960 PF00106 short chain dehydrogenase CO218_11960 PF00300 Histidine phosphatase superfamily (branch 1) CO218_11970 PF07859 alpha/beta hydrolase fold CO218_11980 PF02875 Mur ligase family, glutamate ligase domain CO218_11980 PF01225 Mur ligase family, catalytic domain CO218_11980 PF08245 Mur ligase middle domain CO218_11985 PF00696 Amino acid kinase family CO218_11985 PF13840 ACT domain CO218_11990 PF00733 Asparagine synthase CO218_11990 PF13537 Glutamine amidotransferase domain CO218_12035 PF07690 Major Facilitator Superfamily CO218_12055 PF00313 'Cold-shock' DNA-binding domain CO218_12060 PF06738 Putative threonine/serine exporter CO218_12070 PF03816 Cell envelope-related transcriptional attenuator domain CO218_12090 PF02082 Transcriptional regulator CO218_12095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO218_12095 PF00205 Thiamine pyrophosphate enzyme, central domain CO218_12095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO218_12100 PF00324 Amino acid permease CO218_12110 PF01712 Deoxynucleoside kinase CO218_12115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CO218_12115 PF02403 Seryl-tRNA synthetase N-terminal domain CO218_12160 PF05848 CtsR N-terminal HTH domain CO218_12160 PF17727 CtsR C-terminal dimerization domain CO218_12170 PF00440 Bacterial regulatory proteins, tetR family CO218_12170 PF08360 QacR-like protein, C-terminal region CO218_12175 PF04560 RNA polymerase Rpb2, domain 7 CO218_12175 PF04563 RNA polymerase beta subunit CO218_12175 PF04561 RNA polymerase Rpb2, domain 2 CO218_12175 PF04565 RNA polymerase Rpb2, domain 3 CO218_12175 PF10385 RNA polymerase beta subunit external 1 domain CO218_12175 PF00562 RNA polymerase Rpb2, domain 6 CO218_12180 PF05000 RNA polymerase Rpb1, domain 4 CO218_12180 PF00623 RNA polymerase Rpb1, domain 2 CO218_12180 PF04983 RNA polymerase Rpb1, domain 3 CO218_12180 PF04998 RNA polymerase Rpb1, domain 5 CO218_12180 PF04997 RNA polymerase Rpb1, domain 1 CO218_12185 PF06750 Bacterial Peptidase A24 N-terminal domain CO218_12185 PF01478 Type IV leader peptidase family CO218_12190 PF00164 Ribosomal protein S12/S23 CO218_12195 PF00177 Ribosomal protein S7p/S5e CO218_12200 PF14492 Elongation Factor G, domain II CO218_12200 PF03144 Elongation factor Tu domain 2 CO218_12200 PF00009 Elongation factor Tu GTP binding domain CO218_12200 PF03764 Elongation factor G, domain IV CO218_12200 PF00679 Elongation factor G C-terminus CO218_12205 PF00338 Ribosomal protein S10p/S20e CO218_12210 PF00297 Ribosomal protein L3 CO218_12215 PF00573 Ribosomal protein L4/L1 family CO218_12220 PF00276 Ribosomal protein L23 CO218_12225 PF00181 Ribosomal Proteins L2, RNA binding domain CO218_12225 PF03947 Ribosomal Proteins L2, C-terminal domain CO218_12230 PF00203 Ribosomal protein S19 CO218_12235 PF00237 Ribosomal protein L22p/L17e CO218_12240 PF07650 KH domain CO218_12240 PF00189 Ribosomal protein S3, C-terminal domain CO218_12245 PF00252 Ribosomal protein L16p/L10e CO218_12250 PF00831 Ribosomal L29 protein CO218_12255 PF00366 Ribosomal protein S17 CO218_12260 PF00238 Ribosomal protein L14p/L23e CO218_12265 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CO218_12265 PF00467 KOW motif CO218_12270 PF00281 Ribosomal protein L5 CO218_12270 PF00673 ribosomal L5P family C-terminus CO218_12275 PF00253 Ribosomal protein S14p/S29e CO218_12280 PF00410 Ribosomal protein S8 CO218_12285 PF00347 Ribosomal protein L6 CO218_12290 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CO218_12295 PF03719 Ribosomal protein S5, C-terminal domain CO218_12295 PF00333 Ribosomal protein S5, N-terminal domain CO218_12300 PF00327 Ribosomal protein L30p/L7e CO218_12305 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CO218_12310 PF00344 SecY translocase CO218_12315 PF05191 Adenylate kinase, active site lid CO218_12320 PF01176 Translation initiation factor 1A / IF-1 CO218_12325 PF00444 Ribosomal protein L36 CO218_12330 PF00416 Ribosomal protein S13/S18 CO218_12335 PF00411 Ribosomal protein S11 CO218_12340 PF01000 RNA polymerase Rpb3/RpoA insert domain CO218_12340 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CO218_12340 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CO218_12345 PF01196 Ribosomal protein L17 CO218_12350 PF00348 Polyprenyl synthetase CO218_12375 PF04205 FMN-binding domain CO218_12380 PF02424 ApbE family CO218_12385 PF00005 ABC transporter CO218_12390 PF00005 ABC transporter CO218_12395 PF02361 Cobalt transport protein CO218_12400 PF01416 tRNA pseudouridine synthase CO218_12405 PF00572 Ribosomal protein L13 CO218_12410 PF00380 Ribosomal protein S9/S16 CO218_12415 PF02645 Uncharacterised protein, DegV family COG1307 CO218_12440 PF02780 Transketolase, C-terminal domain CO218_12440 PF02779 Transketolase, pyrimidine binding domain CO218_12440 PF00456 Transketolase, thiamine diphosphate binding domain CO218_12445 PF08501 Shikimate dehydrogenase substrate binding domain CO218_12445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CO218_12450 PF18152 DAHP synthase ferredoxin-like domain CO218_12450 PF00793 DAHP synthetase I family CO218_12455 PF01761 3-dehydroquinate synthase CO218_12465 PF01883 Iron-sulfur cluster assembly protein CO218_12470 PF05683 Fumarase C-terminus CO218_12475 PF05681 Fumarate hydratase (Fumerase) CO218_12480 PF02311 AraC-like ligand binding domain CO218_12480 PF12833 Helix-turn-helix domain CO218_12485 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CO218_12490 PF00005 ABC transporter CO218_12495 PF00950 ABC 3 transport family CO218_12500 PF01297 Zinc-uptake complex component A periplasmic CO218_12510 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_12510 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_12515 PF00939 Sodium:sulfate symporter transmembrane region CO218_12525 PF03949 Malic enzyme, NAD binding domain CO218_12525 PF00390 Malic enzyme, N-terminal domain CO218_12530 PF08218 Citrate lyase ligase C-terminal domain CO218_12535 PF06857 Malonate decarboxylase delta subunit (MdcD) CO218_12540 PF03328 HpcH/HpaI aldolase/citrate lyase family CO218_12545 PF04223 Citrate lyase, alpha subunit (CitF) CO218_12555 PF00206 Lyase CO218_12555 PF10415 Fumarase C C-terminus CO218_12560 PF14537 Cytochrome c3 CO218_12560 PF00890 FAD binding domain CO218_12565 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CO218_12565 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CO218_12570 PF03466 LysR substrate binding domain CO218_12570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_12580 PF00390 Malic enzyme, N-terminal domain CO218_12580 PF03949 Malic enzyme, NAD binding domain CO218_12590 PF13936 Helix-turn-helix domain CO218_12595 PF13520 Amino acid permease CO218_12600 PF12822 ECF transporter, substrate-specific component CO218_12615 PF01654 Cytochrome bd terminal oxidase subunit I CO218_12620 PF02322 Cytochrome bd terminal oxidase subunit II CO218_12625 PF00005 ABC transporter CO218_12625 PF00664 ABC transporter transmembrane region CO218_12630 PF00664 ABC transporter transmembrane region CO218_12630 PF00005 ABC transporter CO218_12645 PF00348 Polyprenyl synthetase CO218_12660 PF13276 HTH-like domain CO218_12660 PF00665 Integrase core domain CO218_12660 PF13333 Integrase core domain CO218_12665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CO218_12665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CO218_12670 PF13457 GW (Gly-Tryp) dipeptide domain CO218_12670 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CO218_12680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CO218_12685 PF02222 ATP-grasp domain CO218_12685 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CO218_12690 PF13361 UvrD-like helicase C-terminal domain CO218_12690 PF00580 UvrD/REP helicase N-terminal domain CO218_12695 PF01653 NAD-dependent DNA ligase adenylation domain CO218_12695 PF00533 BRCA1 C Terminus (BRCT) domain CO218_12695 PF03120 NAD-dependent DNA ligase OB-fold domain CO218_12695 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CO218_12695 PF12826 Helix-hairpin-helix motif CO218_12700 PF07537 CamS sex pheromone cAM373 precursor CO218_12705 PF02686 Glu-tRNAGln amidotransferase C subunit CO218_12710 PF01425 Amidase CO218_12715 PF02637 GatB domain CO218_12715 PF02934 GatB/GatE catalytic domain CO218_12720 PF00781 Diacylglycerol kinase catalytic domain CO218_12725 PF05958 tRNA (Uracil-5-)-methyltransferase CO218_12725 PF01938 TRAM domain CO218_12750 PF01418 Helix-turn-helix domain, rpiR family CO218_12750 PF01380 SIS domain CO218_12765 PF00313 'Cold-shock' DNA-binding domain CO218_12770 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CO218_12770 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CO218_12775 PF00271 Helicase conserved C-terminal domain CO218_12775 PF00270 DEAD/DEAH box helicase CO218_12790 PF02378 Phosphotransferase system, EIIC CO218_12815 PF13276 HTH-like domain CO218_12815 PF00665 Integrase core domain CO218_12815 PF13333 Integrase core domain CO218_12825 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CO218_12825 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CO218_12835 PF02350 UDP-N-acetylglucosamine 2-epimerase CO218_12845 PF00230 Major intrinsic protein CO218_12915 PF02631 RecX family CO218_12920 PF04167 Protein of unknown function (DUF402) CO218_12925 PF08239 Bacterial SH3 domain CO218_12925 PF00877 NlpC/P60 family CO218_12925 PF01476 LysM domain CO218_12940 PF00056 lactate/malate dehydrogenase, NAD binding domain CO218_12940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CO218_12945 PF01594 AI-2E family transporter CO218_12950 PF01467 Cytidylyltransferase-like CO218_12955 PF02447 GntP family permease CO218_12960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CO218_12960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CO218_12965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CO218_12965 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CO218_12970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_12970 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_12975 PF03144 Elongation factor Tu domain 2 CO218_12975 PF00009 Elongation factor Tu GTP binding domain CO218_12975 PF16658 Class II release factor RF3, C-terminal domain CO218_12990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_12990 PF03466 LysR substrate binding domain CO218_13005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CO218_13010 PF00528 Binding-protein-dependent transport system inner membrane component CO218_13015 PF00528 Binding-protein-dependent transport system inner membrane component CO218_13015 PF12911 N-terminal TM domain of oligopeptide transport permease C CO218_13020 PF00005 ABC transporter CO218_13020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CO218_13025 PF00005 ABC transporter CO218_13025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CO218_13040 PF17871 AAA lid domain CO218_13040 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_13040 PF00004 ATPase family associated with various cellular activities (AAA) CO218_13040 PF07724 AAA domain (Cdc48 subfamily) CO218_13050 PF00381 PTS HPr component phosphorylation site CO218_13055 PF00391 PEP-utilising enzyme, mobile domain CO218_13055 PF02896 PEP-utilising enzyme, TIM barrel domain CO218_13055 PF05524 PEP-utilising enzyme, N-terminal CO218_13060 PF00534 Glycosyl transferases group 1 CO218_13060 PF13439 Glycosyltransferase Family 4 CO218_13065 PF00534 Glycosyl transferases group 1 CO218_13065 PF13439 Glycosyltransferase Family 4 CO218_13075 PF00768 D-alanyl-D-alanine carboxypeptidase CO218_13075 PF07943 Penicillin-binding protein 5, C-terminal domain CO218_13080 PF00155 Aminotransferase class I and II CO218_13085 PF08796 Protein of unknown function (DUF1797) CO218_13090 PF00884 Sulfatase CO218_13180 PF00665 Integrase core domain CO218_13180 PF13936 Helix-turn-helix domain CO218_13185 PF00156 Phosphoribosyl transferase domain CO218_13205 PF00149 Calcineurin-like phosphoesterase CO218_13215 PF01566 Natural resistance-associated macrophage protein CO218_13220 PF00762 Ferrochelatase CO218_13225 PF00324 Amino acid permease CO218_13230 PF02574 Homocysteine S-methyltransferase CO218_13245 PF00438 S-adenosylmethionine synthetase, N-terminal domain CO218_13245 PF02772 S-adenosylmethionine synthetase, central domain CO218_13245 PF02773 S-adenosylmethionine synthetase, C-terminal domain CO218_13250 PF07690 Major Facilitator Superfamily CO218_13280 PF00534 Glycosyl transferases group 1 CO218_13290 PF06962 Putative rRNA methylase CO218_13300 PF00133 tRNA synthetases class I (I, L, M and V) CO218_13300 PF09334 tRNA synthetases class I (M) CO218_13300 PF13603 Leucyl-tRNA synthetase, Domain 2 CO218_13300 PF08264 Anticodon-binding domain of tRNA CO218_13315 PF14667 Polysaccharide biosynthesis C-terminal domain CO218_13315 PF01943 Polysaccharide biosynthesis protein CO218_13320 PF01479 S4 domain CO218_13320 PF00849 RNA pseudouridylate synthase CO218_13325 PF01256 Carbohydrate kinase CO218_13330 PF01546 Peptidase family M20/M25/M40 CO218_13340 PF08402 TOBE domain CO218_13340 PF00005 ABC transporter CO218_13345 PF00528 Binding-protein-dependent transport system inner membrane component CO218_13350 PF00528 Binding-protein-dependent transport system inner membrane component CO218_13360 PF03009 Glycerophosphoryl diester phosphodiesterase family CO218_13365 PF01712 Deoxynucleoside kinase CO218_13370 PF01741 Large-conductance mechanosensitive channel, MscL CO218_13390 PF00005 ABC transporter CO218_13395 PF00072 Response regulator receiver domain CO218_13395 PF04397 LytTr DNA-binding domain CO218_13405 PF01625 Peptide methionine sulfoxide reductase CO218_13410 PF13411 MerR HTH family regulatory protein CO218_13435 PF13936 Helix-turn-helix domain CO218_13450 PF04397 LytTr DNA-binding domain CO218_13450 PF00072 Response regulator receiver domain CO218_13470 PF01047 MarR family CO218_13520 PF07457 Protein of unknown function (DUF1516) CO218_13525 PF02219 Methylenetetrahydrofolate reductase CO218_13525 PF02574 Homocysteine S-methyltransferase CO218_13530 PF01717 Cobalamin-independent synthase, Catalytic domain CO218_13530 PF08267 Cobalamin-independent synthase, N-terminal domain CO218_13540 PF14306 PUA-like domain CO218_13540 PF01747 ATP-sulfurylase CO218_13550 PF02272 DHHA1 domain CO218_13550 PF01368 DHH family CO218_13580 PF01554 MatE CO218_13600 PF13673 Acetyltransferase (GNAT) domain CO218_13605 PF00750 tRNA synthetases class I (R) CO218_13605 PF03485 Arginyl tRNA synthetase N terminal domain CO218_13605 PF05746 DALR anticodon binding domain CO218_13625 PF00874 PRD domain CO218_13625 PF00158 Sigma-54 interaction domain CO218_13635 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CO218_13640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CO218_13645 PF02378 Phosphotransferase system, EIIC CO218_13660 PF03734 L,D-transpeptidase catalytic domain CO218_13665 PF00550 Phosphopantetheine attachment site CO218_13670 PF00155 Aminotransferase class I and II CO218_13670 PF00392 Bacterial regulatory proteins, gntR family CO218_13680 PF00155 Aminotransferase class I and II CO218_13685 PF01316 Arginine repressor, DNA binding domain CO218_13685 PF02863 Arginine repressor, C-terminal domain CO218_13695 PF00912 Transglycosylase CO218_13695 PF00905 Penicillin binding protein transpeptidase domain CO218_13700 PF06133 Control of competence regulator ComK, YlbF/YmcA CO218_13705 PF12320 Type 5 capsule protein repressor C-terminal domain CO218_13705 PF00149 Calcineurin-like phosphoesterase CO218_13710 PF13514 AAA domain CO218_13715 PF01966 HD domain CO218_13730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_13730 PF03466 LysR substrate binding domain CO218_13735 PF03358 NADPH-dependent FMN reductase CO218_13735 PF04205 FMN-binding domain CO218_13735 PF00890 FAD binding domain CO218_13785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CO218_13785 PF01872 RibD C-terminal domain CO218_13790 PF00677 Lumazine binding domain CO218_13795 PF00925 GTP cyclohydrolase II CO218_13795 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CO218_13800 PF00885 6,7-dimethyl-8-ribityllumazine synthase CO218_13805 PF00440 Bacterial regulatory proteins, tetR family CO218_13805 PF14278 Transcriptional regulator C-terminal region CO218_13820 PF13545 Crp-like helix-turn-helix domain CO218_13820 PF00027 Cyclic nucleotide-binding domain CO218_13830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CO218_13830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CO218_13860 PF00639 PPIC-type PPIASE domain CO218_13870 PF01230 HIT domain CO218_13875 PF00005 ABC transporter CO218_13880 PF05975 Bacterial ABC transporter protein EcsB CO218_13885 PF01636 Phosphotransferase enzyme family CO218_13890 PF02390 Putative methyltransferase CO218_13900 PF14794 Domain of unknown function (DUF4479) CO218_13900 PF01588 Putative tRNA binding domain CO218_13905 PF01580 FtsK/SpoIIIE family CO218_13905 PF09397 Ftsk gamma domain CO218_13905 PF17854 FtsK alpha domain CO218_13910 PF02875 Mur ligase family, glutamate ligase domain CO218_13910 PF01225 Mur ligase family, catalytic domain CO218_13910 PF08245 Mur ligase middle domain CO218_13930 PF00005 ABC transporter CO218_13935 PF01458 Uncharacterized protein family (UPF0051) CO218_13940 PF00266 Aminotransferase class-V CO218_13945 PF01592 NifU-like N terminal domain CO218_13950 PF01458 Uncharacterized protein family (UPF0051) CO218_13960 PF00005 ABC transporter CO218_13965 PF01032 FecCD transport family CO218_13970 PF00258 Flavodoxin CO218_13975 PF02391 MoaE protein CO218_13985 PF04055 Radical SAM superfamily CO218_13985 PF06463 Molybdenum Cofactor Synthesis C CO218_13990 PF07690 Major Facilitator Superfamily CO218_13995 PF01883 Iron-sulfur cluster assembly protein CO218_14020 PF00196 Bacterial regulatory proteins, luxR family CO218_14020 PF00072 Response regulator receiver domain CO218_14025 PF07730 Histidine kinase CO218_14025 PF17200 Single Cache domain 2 CO218_14040 PF12804 MobA-like NTP transferase domain CO218_14045 PF01967 MoaC family CO218_14050 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CO218_14055 PF03453 MoeA N-terminal region (domain I and II) CO218_14055 PF03454 MoeA C-terminal region (domain IV) CO218_14055 PF00994 Probable molybdopterin binding domain CO218_14060 PF00994 Probable molybdopterin binding domain CO218_14065 PF00899 ThiF family CO218_14070 PF14710 Respiratory nitrate reductase alpha N-terminal CO218_14070 PF01568 Molydopterin dinucleotide binding domain CO218_14070 PF00384 Molybdopterin oxidoreductase CO218_14075 PF14711 Respiratory nitrate reductase beta C-terminal CO218_14075 PF13247 4Fe-4S dicluster domain CO218_14085 PF02665 Nitrate reductase gamma subunit CO218_14105 PF13443 Cro/C1-type HTH DNA-binding domain CO218_14110 PF01027 Inhibitor of apoptosis-promoting Bax1 CO218_14115 PF01367 5'-3' exonuclease, C-terminal SAM fold CO218_14115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CO218_14115 PF00476 DNA polymerase family A CO218_14120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CO218_14120 PF06827 Zinc finger found in FPG and IleRS CO218_14120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CO218_14125 PF01121 Dephospho-CoA kinase CO218_14130 PF03477 ATP cone domain CO218_14135 PF07261 Replication initiation and membrane attachment CO218_14140 PF01695 IstB-like ATP binding protein CO218_14140 PF07319 Primosomal protein DnaI N-terminus CO218_14145 PF03129 Anticodon binding domain CO218_14145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CO218_14145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CO218_14145 PF02824 TGS domain CO218_14150 PF05198 Translation initiation factor IF-3, N-terminal domain CO218_14150 PF00707 Translation initiation factor IF-3, C-terminal domain CO218_14155 PF01632 Ribosomal protein L35 CO218_14160 PF00453 Ribosomal protein L20 CO218_14170 PF16193 AAA C-terminal domain CO218_14170 PF12002 MgsA AAA+ ATPase C terminal CO218_14170 PF05496 Holliday junction DNA helicase RuvB P-loop domain CO218_14175 PF08240 Alcohol dehydrogenase GroES-like domain CO218_14175 PF00107 Zinc-binding dehydrogenase CO218_14180 PF01638 HxlR-like helix-turn-helix CO218_14205 PF01926 50S ribosome-binding GTPase CO218_14210 PF01985 CRS1 / YhbY (CRM) domain CO218_14215 PF01467 Cytidylyltransferase-like CO218_14220 PF01966 HD domain CO218_14230 PF13649 Methyltransferase domain CO218_14235 PF05636 HIGH Nucleotidyl Transferase CO218_14245 PF01783 Ribosomal L32p protein family CO218_14260 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CO218_14260 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CO218_14270 PF00072 Response regulator receiver domain CO218_14270 PF00486 Transcriptional regulatory protein, C terminal CO218_14275 PF00512 His Kinase A (phospho-acceptor) domain CO218_14275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CO218_14275 PF18719 ArlS sensor domain CO218_14280 PF00872 Transposase, Mutator family CO218_14290 PF13476 AAA domain CO218_14295 PF12320 Type 5 capsule protein repressor C-terminal domain CO218_14295 PF00149 Calcineurin-like phosphoesterase CO218_14305 PF02096 60Kd inner membrane protein CO218_14310 PF00708 Acylphosphatase CO218_14315 PF08032 RNA 2'-O ribose methyltransferase substrate binding CO218_14315 PF00588 SpoU rRNA Methylase family CO218_14325 PF01638 HxlR-like helix-turn-helix CO218_14330 PF01409 tRNA synthetases class II core domain (F) CO218_14330 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CO218_14335 PF03483 B3/4 domain CO218_14335 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CO218_14335 PF03147 Ferredoxin-fold anticodon binding domain CO218_14335 PF03484 tRNA synthetase B5 domain CO218_14335 PF01588 Putative tRNA binding domain CO218_14340 PF02618 YceG-like family CO218_14345 PF00485 Phosphoribulokinase / Uridine kinase family CO218_14350 PF01272 Transcription elongation factor, GreA/GreB, C-term CO218_14350 PF03449 Transcription elongation factor, N-terminal CO218_14365 PF01521 Iron-sulphur cluster biosynthesis CO218_14375 PF03717 Penicillin-binding Protein dimerisation domain CO218_14375 PF00905 Penicillin binding protein transpeptidase domain CO218_14380 PF00471 Ribosomal protein L33 CO218_14385 PF01812 5-formyltetrahydrofolate cyclo-ligase family CO218_14390 PF01694 Rhomboid family CO218_14400 PF00480 ROK family CO218_14420 PF03009 Glycerophosphoryl diester phosphodiesterase family CO218_14430 PF13411 MerR HTH family regulatory protein CO218_14435 PF03951 Glutamine synthetase, beta-Grasp domain CO218_14435 PF00120 Glutamine synthetase, catalytic domain CO218_14480 PF00829 Ribosomal prokaryotic L21 protein CO218_14490 PF01016 Ribosomal L27 protein CO218_14495 PF01321 Creatinase/Prolidase N-terminal domain CO218_14495 PF00557 Metallopeptidase family M24 CO218_14500 PF09285 Elongation factor P, C-terminal CO218_14500 PF01132 Elongation factor P (EF-P) OB domain CO218_14500 PF08207 Elongation factor P (EF-P) KOW-like domain CO218_14505 PF03780 Asp23 family, cell envelope-related function CO218_14510 PF01029 NusB family CO218_14515 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CO218_14515 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CO218_14520 PF13742 OB-fold nucleic acid binding domain CO218_14520 PF02601 Exonuclease VII, large subunit CO218_14525 PF02609 Exonuclease VII small subunit CO218_14530 PF00348 Polyprenyl synthetase CO218_14535 PF01728 FtsJ-like methyltransferase CO218_14535 PF01479 S4 domain CO218_14540 PF02863 Arginine repressor, C-terminal domain CO218_14540 PF01316 Arginine repressor, DNA binding domain CO218_14545 PF13476 AAA domain CO218_14550 PF00571 CBS domain CO218_14550 PF00005 ABC transporter CO218_14555 PF00528 Binding-protein-dependent transport system inner membrane component CO218_14560 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CO218_14565 PF00528 Binding-protein-dependent transport system inner membrane component CO218_14575 PF00625 Guanylate kinase CO218_14580 PF01192 RNA polymerase Rpb6 CO218_14585 PF04127 DNA / pantothenate metabolism flavoprotein CO218_14585 PF02441 Flavoprotein CO218_14590 PF17764 3′ DNA-binding domain (3′BD) CO218_14590 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CO218_14590 PF04851 Type III restriction enzyme, res subunit CO218_14590 PF18074 Primosomal protein N C-terminal domain CO218_14590 PF00271 Helicase conserved C-terminal domain CO218_14595 PF02911 Formyl transferase, C-terminal domain CO218_14595 PF00551 Formyl transferase CO218_14600 PF01029 NusB family CO218_14600 PF01189 16S rRNA methyltransferase RsmB/F CO218_14610 PF03793 PASTA domain CO218_14610 PF00069 Protein kinase domain CO218_14615 PF03193 RsgA GTPase CO218_14615 PF16745 RsgA N-terminal domain CO218_14620 PF00834 Ribulose-phosphate 3 epimerase family CO218_14625 PF04263 Thiamin pyrophosphokinase, catalytic domain CO218_14625 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CO218_14630 PF00830 Ribosomal L28 family CO218_14635 PF03780 Asp23 family, cell envelope-related function CO218_14640 PF02734 DAK2 domain CO218_14640 PF13684 Dihydroxyacetone kinase family CO218_14645 PF00270 DEAD/DEAH box helicase CO218_14645 PF17191 RecG wedge domain CO218_14645 PF00271 Helicase conserved C-terminal domain CO218_14650 PF02504 Fatty acid synthesis protein CO218_14655 PF00550 Phosphopantetheine attachment site CO218_14660 PF14622 Ribonuclease-III-like CO218_14660 PF00035 Double-stranded RNA binding motif CO218_14665 PF06470 SMC proteins Flexible Hinge Domain CO218_14665 PF02463 RecF/RecN/SMC N terminal domain CO218_14670 PF02881 SRP54-type protein, helical bundle domain CO218_14670 PF00448 SRP54-type protein, GTPase domain CO218_14675 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CO218_14680 PF02881 SRP54-type protein, helical bundle domain CO218_14680 PF02978 Signal peptide binding domain CO218_14680 PF00448 SRP54-type protein, GTPase domain CO218_14685 PF00886 Ribosomal protein S16 CO218_14695 PF05239 PRC-barrel domain CO218_14695 PF01782 RimM N-terminal domain CO218_14700 PF01746 tRNA (Guanine-1)-methyltransferase CO218_14705 PF01245 Ribosomal protein L19 CO218_14725 PF00005 ABC transporter CO218_14735 PF04715 Anthranilate synthase component I, N terminal region CO218_14735 PF00425 chorismate binding enzyme CO218_14740 PF00591 Glycosyl transferase family, a/b domain CO218_14740 PF00117 Glutamine amidotransferase class-I CO218_14740 PF02885 Glycosyl transferase family, helical bundle domain CO218_14745 PF00591 Glycosyl transferase family, a/b domain CO218_14745 PF02885 Glycosyl transferase family, helical bundle domain CO218_14750 PF00218 Indole-3-glycerol phosphate synthase CO218_14755 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CO218_14760 PF00291 Pyridoxal-phosphate dependent enzyme CO218_14765 PF00290 Tryptophan synthase alpha chain CO218_14790 PF01546 Peptidase family M20/M25/M40 CO218_14790 PF07687 Peptidase dimerisation domain CO218_14795 PF00107 Zinc-binding dehydrogenase CO218_14795 PF08240 Alcohol dehydrogenase GroES-like domain CO218_14805 PF00106 short chain dehydrogenase CO218_14815 PF07977 FabA-like domain CO218_14820 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CO218_14820 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CO218_14825 PF00550 Phosphopantetheine attachment site CO218_14830 PF00698 Acyl transferase domain CO218_14840 PF00109 Beta-ketoacyl synthase, N-terminal domain CO218_14840 PF02801 Beta-ketoacyl synthase, C-terminal domain CO218_14845 PF00364 Biotin-requiring enzyme CO218_14850 PF07977 FabA-like domain CO218_14855 PF00289 Biotin carboxylase, N-terminal domain CO218_14855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CO218_14855 PF02785 Biotin carboxylase C-terminal domain CO218_14860 PF01039 Carboxyl transferase domain CO218_14865 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CO218_14880 PF04474 Protein of unknown function (DUF554) CO218_14885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CO218_14885 PF03466 LysR substrate binding domain CO218_14890 PF03061 Thioesterase superfamily CO218_14905 PF07690 Major Facilitator Superfamily CO218_14940 PF13936 Helix-turn-helix domain CO218_14980 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading CO218_14985 PF03992 Antibiotic biosynthesis monooxygenase CO218_14995 PF03073 TspO/MBR family CO218_15005 PF05656 Protein of unknown function (DUF805) CO218_15010 PF00781 Diacylglycerol kinase catalytic domain CO218_15025 PF04226 Transglycosylase associated protein CO218_15030 PF05532 CsbD-like CO218_15040 PF03577 Peptidase family C69 CO218_15045 PF01361 Tautomerase enzyme CO218_15050 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CO218_15050 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CO218_15060 PF13936 Helix-turn-helix domain CO218_15085 PF00202 Aminotransferase class-III CO218_15095 PF13614 AAA domain CO218_15100 PF08708 Primase C terminal 1 (PriCT-1) CO218_15225 PF13154 Protein of unknown function (DUF3991) CO218_15240 PF02861 Clp amino terminal domain, pathogenicity island component CO218_15240 PF17871 AAA lid domain CO218_15240 PF07724 AAA domain (Cdc48 subfamily) CO218_15240 PF00004 ATPase family associated with various cellular activities (AAA) CO218_15240 PF10431 C-terminal, D2-small domain, of ClpB protein CO218_15275 PF00872 Transposase, Mutator family CO218_15280 PF02706 Chain length determinant protein CO218_15285 PF13614 AAA domain CO218_15295 PF00239 Resolvase, N terminal domain CO218_15295 PF02796 Helix-turn-helix domain of resolvase CO218_15305 PF01566 Natural resistance-associated macrophage protein CO218_15320 PF00403 Heavy-metal-associated domain CO218_15325 PF01022 Bacterial regulatory protein, arsR family CO218_15330 PF13936 Helix-turn-helix domain CO218_15335 PF00860 Permease family CO218_15340 PF13005 zinc-finger binding domain of transposase IS66 CO218_15340 PF13007 Transposase C of IS166 homeodomain CO218_15340 PF13817 IS66 C-terminal element CO218_15340 PF03050 Transposase IS66 family CO218_15355 PF13333 Integrase core domain CO218_15355 PF00665 Integrase core domain CO218_15355 PF13276 HTH-like domain CO218_15370 PF04226 Transglycosylase associated protein CO218_15375 PF00205 Thiamine pyrophosphate enzyme, central domain CO218_15375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO218_15375 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO218_15385 PF13614 AAA domain CO218_15420 PF01566 Natural resistance-associated macrophage protein CO218_15430 PF00872 Transposase, Mutator family CO218_15440 PF06970 Replication initiator protein A (RepA) N-terminus CO218_15440 PF18008 Replication initiator protein A C-terminal domain CO218_15465 PF01131 DNA topoisomerase CO218_15465 PF01751 Toprim domain CO218_15505 PF00271 Helicase conserved C-terminal domain CO218_15505 PF00176 SNF2 family N-terminal domain CO218_15520 PF03747 ADP-ribosylglycohydrolase CO218_15530 PF00294 pfkB family carbohydrate kinase CO218_15550 PF02796 Helix-turn-helix domain of resolvase CO218_15550 PF00239 Resolvase, N terminal domain CO218_15555 PF13732 Domain of unknown function (DUF4162) CO218_15555 PF00005 ABC transporter CO218_15580 PF06100 MCRA family CO218_15585 PF08951 Enterocin A Immunity CO218_15595 PF00665 Integrase core domain CO218_15595 PF13333 Integrase core domain CO218_15620 PF00571 CBS domain CO218_15620 PF00005 ABC transporter CO218_15625 PF00528 Binding-protein-dependent transport system inner membrane component CO218_15630 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CO218_15640 PF00582 Universal stress protein family CO218_15645 PF13610 DDE domain CO218_15650 PF13936 Helix-turn-helix domain CO218_15650 PF00665 Integrase core domain CO218_15675 PF03960 ArsC family CO218_15705 PF13614 AAA domain CO218_15715 PF13936 Helix-turn-helix domain CO218_15725 PF13520 Amino acid permease CO218_15730 PF13936 Helix-turn-helix domain CO218_15735 PF02796 Helix-turn-helix domain of resolvase CO218_15735 PF00239 Resolvase, N terminal domain CO218_15750 PF11799 impB/mucB/samB family C-terminal domain CO218_15750 PF11798 IMS family HHH motif CO218_15750 PF00817 impB/mucB/samB family CO218_15770 PF00580 UvrD/REP helicase N-terminal domain CO218_15770 PF13361 UvrD-like helicase C-terminal domain CO218_15775 PF12008 Type I restriction and modification enzyme - subunit R C terminal CO218_15775 PF18766 SWI2/SNF2 ATPase CO218_15775 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CO218_15780 PF12161 HsdM N-terminal domain CO218_15780 PF02384 N-6 DNA Methylase CO218_15810 PF01751 Toprim domain CO218_15810 PF01131 DNA topoisomerase CO218_15890 PF17841 BID domain of Bartonella effector protein (Bep) CO218_15890 PF01443 Viral (Superfamily 1) RNA helicase CO218_15890 PF03389 MobA/MobL family CO218_15925 PF00205 Thiamine pyrophosphate enzyme, central domain CO218_15925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CO218_15925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CO218_15935 PF13276 HTH-like domain CO218_15935 PF13333 Integrase core domain CO218_15935 PF00665 Integrase core domain CO218_15955 PF13614 AAA domain CO218_15985 PF03432 Relaxase/Mobilisation nuclease domain CO218_15995 PF05732 Firmicute plasmid replication protein (RepL) CO218_16010 PF01610 Transposase CO218_16010 PF13683 Integrase core domain CO218_16025 PF13936 Helix-turn-helix domain CO218_16025 PF00665 Integrase core domain CO218_16030 PF13614 AAA domain CO218_16045 PF13936 Helix-turn-helix domain CO218_16045 PF00665 Integrase core domain CO218_16050 PF07563 Protein of unknown function (DUF1541) CO218_16065 PF01381 Helix-turn-helix CO218_16070 PF00872 Transposase, Mutator family CO218_16135 PF02556 Preprotein translocase subunit SecB