locus-tag class description DKL56_00005 PF00308 Bacterial dnaA protein DKL56_00005 PF08299 Bacterial dnaA protein helix-turn-helix DKL56_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DKL56_00010 PF02767 DNA polymerase III beta subunit, central domain DKL56_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DKL56_00020 PF02463 RecF/RecN/SMC N terminal domain DKL56_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DKL56_00025 PF01751 Toprim domain DKL56_00025 PF00204 DNA gyrase B DKL56_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DKL56_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DKL56_00035 PF01250 Ribosomal protein S6 DKL56_00040 PF00436 Single-strand binding protein family DKL56_00045 PF01084 Ribosomal protein S18 DKL56_00055 PF00005 ABC transporter DKL56_00055 PF12704 MacB-like periplasmic core domain DKL56_00055 PF02687 FtsX-like permease family DKL56_00060 PF02272 DHHA1 domain DKL56_00060 PF01368 DHH family DKL56_00065 PF03948 Ribosomal protein L9, C-terminal domain DKL56_00065 PF01281 Ribosomal protein L9, N-terminal domain DKL56_00070 PF03796 DnaB-like helicase C terminal domain DKL56_00070 PF00772 DnaB-like helicase N terminal domain DKL56_00085 PF02308 MgtC family DKL56_00100 PF02378 Phosphotransferase system, EIIC DKL56_00110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKL56_00110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKL56_00120 PF03830 PTS system sorbose subfamily IIB component DKL56_00125 PF03609 PTS system sorbose-specific iic component DKL56_00130 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_00135 PF00356 Bacterial regulatory proteins, lacI family DKL56_00165 PF01431 Peptidase family M13 DKL56_00165 PF05649 Peptidase family M13 DKL56_00180 PF03575 Peptidase family S51 DKL56_00195 PF00128 Alpha amylase, catalytic domain DKL56_00195 PF16657 Maltogenic Amylase, C-terminal domain DKL56_00200 PF07702 UTRA domain DKL56_00200 PF00392 Bacterial regulatory proteins, gntR family DKL56_00205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_00205 PF02378 Phosphotransferase system, EIIC DKL56_00205 PF00367 phosphotransferase system, EIIB DKL56_00210 PF13460 NAD(P)H-binding DKL56_00215 PF00005 ABC transporter DKL56_00215 PF13732 Domain of unknown function (DUF4162) DKL56_00230 PF00005 ABC transporter DKL56_00250 PF03466 LysR substrate binding domain DKL56_00250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_00255 PF13411 MerR HTH family regulatory protein DKL56_00265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DKL56_00265 PF02779 Transketolase, pyrimidine binding domain DKL56_00265 PF02780 Transketolase, C-terminal domain DKL56_00275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DKL56_00275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKL56_00280 PF01923 Cobalamin adenosyltransferase DKL56_00295 PF17975 Ribonucleotide reductase alpha domain DKL56_00295 PF02867 Ribonucleotide reductase, barrel domain DKL56_00305 PF13419 Haloacid dehalogenase-like hydrolase DKL56_00310 PF00248 Aldo/keto reductase family DKL56_00315 PF03807 NADP oxidoreductase coenzyme F420-dependent DKL56_00315 PF14748 Pyrroline-5-carboxylate reductase dimerisation DKL56_00320 PF00005 ABC transporter DKL56_00320 PF00664 ABC transporter transmembrane region DKL56_00325 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKL56_00325 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKL56_00330 PF03372 Endonuclease/Exonuclease/phosphatase family DKL56_00335 PF04851 Type III restriction enzyme, res subunit DKL56_00335 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DKL56_00335 PF00271 Helicase conserved C-terminal domain DKL56_00335 PF08463 EcoEI R protein C-terminal DKL56_00340 PF00144 Beta-lactamase DKL56_00365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_00365 PF03466 LysR substrate binding domain DKL56_00370 PF00890 FAD binding domain DKL56_00370 PF04205 FMN-binding domain DKL56_00375 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DKL56_00380 PF01979 Amidohydrolase family DKL56_00385 PF00860 Permease family DKL56_00390 PF01979 Amidohydrolase family DKL56_00460 PF00072 Response regulator receiver domain DKL56_00460 PF00486 Transcriptional regulatory protein, C terminal DKL56_00465 PF00989 PAS fold DKL56_00465 PF00672 HAMP domain DKL56_00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_00465 PF00512 His Kinase A (phospho-acceptor) domain DKL56_00480 PF00753 Metallo-beta-lactamase superfamily DKL56_00485 PF13180 PDZ domain DKL56_00490 PF02590 Predicted SPOUT methyltransferase DKL56_00495 PF08244 Glycosyl hydrolases family 32 C terminal DKL56_00495 PF00251 Glycosyl hydrolases family 32 N-terminal domain DKL56_00500 PF00664 ABC transporter transmembrane region DKL56_00500 PF00005 ABC transporter DKL56_00505 PF00005 ABC transporter DKL56_00505 PF00664 ABC transporter transmembrane region DKL56_00515 PF00005 ABC transporter DKL56_00525 PF01435 Peptidase family M48 DKL56_00530 PF04011 LemA family DKL56_00535 PF03600 Citrate transporter DKL56_00575 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_00575 PF12002 MgsA AAA+ ATPase C terminal DKL56_00575 PF16193 AAA C-terminal domain DKL56_00585 PF13276 HTH-like domain DKL56_00585 PF00665 Integrase core domain DKL56_00585 PF13333 Integrase core domain DKL56_00590 PF00005 ABC transporter DKL56_00595 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_00600 PF02245 Methylpurine-DNA glycosylase (MPG) DKL56_00605 PF04343 Protein of unknown function, DUF488 DKL56_00610 PF03741 Integral membrane protein TerC family DKL56_00615 PF02146 Sir2 family DKL56_00625 PF03590 Aspartate-ammonia ligase DKL56_00635 PF13091 PLD-like domain DKL56_00635 PF13396 Phospholipase_D-nuclease N-terminal DKL56_00645 PF00075 RNase H DKL56_00655 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DKL56_00655 PF00535 Glycosyl transferase family 2 DKL56_00665 PF14572 Phosphoribosyl synthetase-associated domain DKL56_00665 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKL56_00695 PF01820 D-ala D-ala ligase N-terminus DKL56_00695 PF07478 D-ala D-ala ligase C-terminus DKL56_00715 PF13472 GDSL-like Lipase/Acylhydrolase family DKL56_00715 PF07859 alpha/beta hydrolase fold DKL56_00735 PF11838 ERAP1-like C-terminal domain DKL56_00735 PF01433 Peptidase family M1 domain DKL56_00745 PF00854 POT family DKL56_00755 PF00005 ABC transporter DKL56_00770 PF13458 Periplasmic binding protein DKL56_00775 PF02653 Branched-chain amino acid transport system / permease component DKL56_00780 PF02653 Branched-chain amino acid transport system / permease component DKL56_00780 PF11862 Domain of unknown function (DUF3382) DKL56_00785 PF12399 Branched-chain amino acid ATP-binding cassette transporter DKL56_00785 PF00005 ABC transporter DKL56_00790 PF00005 ABC transporter DKL56_00800 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_00810 PF13538 UvrD-like helicase C-terminal domain DKL56_00820 PF00485 Phosphoribulokinase / Uridine kinase family DKL56_00825 PF01132 Elongation factor P (EF-P) OB domain DKL56_00825 PF08207 Elongation factor P (EF-P) KOW-like domain DKL56_00825 PF09285 Elongation factor P, C-terminal DKL56_00845 PF03883 Peroxide stress protein YaaA DKL56_00850 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_00865 PF00005 ABC transporter DKL56_00880 PF03358 NADPH-dependent FMN reductase DKL56_00885 PF03358 NADPH-dependent FMN reductase DKL56_00890 PF13350 Tyrosine phosphatase family DKL56_00895 PF02424 ApbE family DKL56_00910 PF02527 rRNA small subunit methyltransferase G DKL56_00915 PF02195 ParB-like nuclease domain DKL56_00915 PF17762 HTH domain found in ParB protein DKL56_00920 PF13614 AAA domain DKL56_00925 PF02195 ParB-like nuclease domain DKL56_00925 PF17762 HTH domain found in ParB protein DKL56_00930 PF06107 Bacterial protein of unknown function (DUF951) DKL56_00935 PF01926 50S ribosome-binding GTPase DKL56_00935 PF06071 Protein of unknown function (DUF933) DKL56_00945 PF00664 ABC transporter transmembrane region DKL56_00945 PF00005 ABC transporter DKL56_00950 PF00664 ABC transporter transmembrane region DKL56_00950 PF00005 ABC transporter DKL56_00955 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_00960 PF00571 CBS domain DKL56_00960 PF00005 ABC transporter DKL56_00965 PF00486 Transcriptional regulatory protein, C terminal DKL56_00965 PF00072 Response regulator receiver domain DKL56_00970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_00970 PF00512 His Kinase A (phospho-acceptor) domain DKL56_00975 PF08245 Mur ligase middle domain DKL56_00975 PF02875 Mur ligase family, glutamate ligase domain DKL56_00980 PF01177 Asp/Glu/Hydantoin racemase DKL56_00985 PF00005 ABC transporter DKL56_00990 PF02653 Branched-chain amino acid transport system / permease component DKL56_01005 PF03610 PTS system fructose IIA component DKL56_01005 PF00874 PRD domain DKL56_01005 PF00158 Sigma-54 interaction domain DKL56_01015 PF03830 PTS system sorbose subfamily IIB component DKL56_01020 PF03609 PTS system sorbose-specific iic component DKL56_01025 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01040 PF04963 Sigma-54 factor, core binding domain DKL56_01040 PF00309 Sigma-54 factor, Activator interacting domain (AID) DKL56_01040 PF04552 Sigma-54, DNA binding domain DKL56_01050 PF00248 Aldo/keto reductase family DKL56_01055 PF00056 lactate/malate dehydrogenase, NAD binding domain DKL56_01055 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKL56_01060 PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 DKL56_01060 PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 DKL56_01060 PF16592 REC lobe of CRISPR-associated endonuclease Cas9 DKL56_01060 PF13395 HNH endonuclease DKL56_01065 PF01867 CRISPR associated protein Cas1 DKL56_01070 PF09827 CRISPR associated protein Cas2 DKL56_01090 PF00561 alpha/beta hydrolase fold DKL56_01110 PF02811 PHP domain DKL56_01110 PF14579 Helix-hairpin-helix motif DKL56_01110 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DKL56_01110 PF07733 Bacterial DNA polymerase III alpha NTPase domain DKL56_01110 PF11490 DNA polymerase III polC-type N-terminus II DKL56_01110 PF14480 DNA polymerase III polC-type N-terminus I DKL56_01110 PF00929 Exonuclease DKL56_01115 PF01223 DNA/RNA non-specific endonuclease DKL56_01125 PF17912 MalK OB fold domain DKL56_01125 PF00005 ABC transporter DKL56_01130 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_01135 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_01145 PF01547 Bacterial extracellular solute-binding protein DKL56_01150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_01150 PF03466 LysR substrate binding domain DKL56_01155 PF07690 Major Facilitator Superfamily DKL56_01160 PF00890 FAD binding domain DKL56_01160 PF04205 FMN-binding domain DKL56_01185 PF03176 MMPL family DKL56_01190 PF00005 ABC transporter DKL56_01200 PF00171 Aldehyde dehydrogenase family DKL56_01210 PF09335 SNARE associated Golgi protein DKL56_01220 PF03949 Malic enzyme, NAD binding domain DKL56_01220 PF00390 Malic enzyme, N-terminal domain DKL56_01230 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKL56_01230 PF02403 Seryl-tRNA synthetase N-terminal domain DKL56_01265 PF03610 PTS system fructose IIA component DKL56_01265 PF03830 PTS system sorbose subfamily IIB component DKL56_01270 PF03609 PTS system sorbose-specific iic component DKL56_01275 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01285 PF00324 Amino acid permease DKL56_01290 PF13302 Acetyltransferase (GNAT) domain DKL56_01295 PF01370 NAD dependent epimerase/dehydratase family DKL56_01300 PF00881 Nitroreductase family DKL56_01325 PF13411 MerR HTH family regulatory protein DKL56_01325 PF06445 GyrI-like small molecule binding domain DKL56_01330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKL56_01330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKL56_01340 PF03830 PTS system sorbose subfamily IIB component DKL56_01345 PF03609 PTS system sorbose-specific iic component DKL56_01350 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01355 PF01380 SIS domain DKL56_01360 PF07702 UTRA domain DKL56_01360 PF00392 Bacterial regulatory proteins, gntR family DKL56_01365 PF00392 Bacterial regulatory proteins, gntR family DKL56_01365 PF07702 UTRA domain DKL56_01375 PF03609 PTS system sorbose-specific iic component DKL56_01380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKL56_01380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKL56_01390 PF01380 SIS domain DKL56_01395 PF03830 PTS system sorbose subfamily IIB component DKL56_01405 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01420 PF01055 Glycosyl hydrolases family 31 DKL56_01420 PF13802 Galactose mutarotase-like DKL56_01420 PF16338 Domain of unknown function (DUF4968) DKL56_01420 PF17137 Domain of unknown function (DUF5110) DKL56_01425 PF01791 DeoC/LacD family aldolase DKL56_01440 PF00294 pfkB family carbohydrate kinase DKL56_01445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_01445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKL56_01460 PF00392 Bacterial regulatory proteins, gntR family DKL56_01460 PF07702 UTRA domain DKL56_01475 PF03830 PTS system sorbose subfamily IIB component DKL56_01480 PF03609 PTS system sorbose-specific iic component DKL56_01485 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01490 PF01380 SIS domain DKL56_01495 PF01380 SIS domain DKL56_01500 PF00392 Bacterial regulatory proteins, gntR family DKL56_01500 PF07702 UTRA domain DKL56_01520 PF00155 Aminotransferase class I and II DKL56_01545 PF01467 Cytidylyltransferase-like DKL56_01550 PF03808 Glycosyl transferase WecB/TagA/CpsF family DKL56_01560 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DKL56_01560 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DKL56_01560 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DKL56_01565 PF02540 NAD synthase DKL56_01570 PF01411 tRNA synthetases class II (A) DKL56_01570 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DKL56_01570 PF02272 DHHA1 domain DKL56_01575 PF06135 IreB regulatory phosphoprotein DKL56_01580 PF03652 Holliday junction resolvase DKL56_01585 PF06949 Protein of unknown function (DUF1292) DKL56_01590 PF01713 Smr domain DKL56_01590 PF00488 MutS domain V DKL56_01595 PF00085 Thioredoxin DKL56_01600 PF01741 Large-conductance mechanosensitive channel, MscL DKL56_01605 PF10702 Protein of unknown function (DUF2507) DKL56_01610 PF01177 Asp/Glu/Hydantoin racemase DKL56_01615 PF01725 Ham1 family DKL56_01620 PF00924 Mechanosensitive ion channel DKL56_01635 PF01321 Creatinase/Prolidase N-terminal domain DKL56_01635 PF00557 Metallopeptidase family M24 DKL56_01640 PF00356 Bacterial regulatory proteins, lacI family DKL56_01645 PF03009 Glycerophosphoryl diester phosphodiesterase family DKL56_01655 PF02872 5'-nucleotidase, C-terminal domain DKL56_01665 PF13344 Haloacid dehalogenase-like hydrolase DKL56_01675 PF09335 SNARE associated Golgi protein DKL56_01680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKL56_01835 PF13439 Glycosyltransferase Family 4 DKL56_01835 PF00534 Glycosyl transferases group 1 DKL56_01840 PF00534 Glycosyl transferases group 1 DKL56_01840 PF13439 Glycosyltransferase Family 4 DKL56_01850 PF00884 Sulfatase DKL56_01860 PF00575 S1 RNA binding domain DKL56_01860 PF17876 Cold shock domain DKL56_01860 PF08206 Ribonuclease B OB domain DKL56_01860 PF00773 RNB domain DKL56_01865 PF01668 SmpB protein DKL56_01875 PF01595 Cyclin M transmembrane N-terminal domain DKL56_01875 PF00571 CBS domain DKL56_01875 PF03471 Transporter associated domain DKL56_01880 PF00156 Phosphoribosyl transferase domain DKL56_01880 PF01171 PP-loop family DKL56_01880 PF11734 TilS substrate C-terminal domain DKL56_01905 PF00485 Phosphoribulokinase / Uridine kinase family DKL56_01915 PF07702 UTRA domain DKL56_01915 PF00392 Bacterial regulatory proteins, gntR family DKL56_01925 PF03830 PTS system sorbose subfamily IIB component DKL56_01930 PF03609 PTS system sorbose-specific iic component DKL56_01935 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_01940 PF01380 SIS domain DKL56_01950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_01955 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DKL56_01960 PF00232 Glycosyl hydrolase family 1 DKL56_01970 PF02378 Phosphotransferase system, EIIC DKL56_01990 PF00210 Ferritin-like domain DKL56_01995 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKL56_02000 PF01156 Inosine-uridine preferring nucleoside hydrolase DKL56_02005 PF07702 UTRA domain DKL56_02005 PF00392 Bacterial regulatory proteins, gntR family DKL56_02015 PF00455 DeoR C terminal sensor domain DKL56_02015 PF08220 DeoR-like helix-turn-helix domain DKL56_02020 PF09364 XFP N-terminal domain DKL56_02020 PF09363 XFP C-terminal domain DKL56_02020 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DKL56_02025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_02025 PF00367 phosphotransferase system, EIIB DKL56_02025 PF02378 Phosphotransferase system, EIIC DKL56_02030 PF02872 5'-nucleotidase, C-terminal domain DKL56_02030 PF00149 Calcineurin-like phosphoesterase DKL56_02035 PF07662 Na+ dependent nucleoside transporter C-terminus DKL56_02035 PF01773 Na+ dependent nucleoside transporter N-terminus DKL56_02040 PF00690 Cation transporter/ATPase, N-terminus DKL56_02040 PF00689 Cation transporting ATPase, C-terminus DKL56_02045 PF13185 GAF domain DKL56_02050 PF00005 ABC transporter DKL56_02055 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKL56_02060 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02065 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02070 PF01380 SIS domain DKL56_02075 PF00294 pfkB family carbohydrate kinase DKL56_02080 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_02085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_02090 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02095 PF12911 N-terminal TM domain of oligopeptide transport permease C DKL56_02095 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKL56_02100 PF00005 ABC transporter DKL56_02105 PF00005 ABC transporter DKL56_02105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKL56_02115 PF00392 Bacterial regulatory proteins, gntR family DKL56_02115 PF07702 UTRA domain DKL56_02125 PF00248 Aldo/keto reductase family DKL56_02130 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DKL56_02145 PF10263 SprT-like family DKL56_02155 PF00664 ABC transporter transmembrane region DKL56_02155 PF00005 ABC transporter DKL56_02165 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DKL56_02165 PF13457 GW (Gly-Tryp) dipeptide domain DKL56_02170 PF13361 UvrD-like helicase C-terminal domain DKL56_02170 PF00580 UvrD/REP helicase N-terminal domain DKL56_02175 PF01653 NAD-dependent DNA ligase adenylation domain DKL56_02175 PF03120 NAD-dependent DNA ligase OB-fold domain DKL56_02175 PF00533 BRCA1 C Terminus (BRCT) domain DKL56_02175 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DKL56_02175 PF12826 Helix-hairpin-helix motif DKL56_02180 PF07537 CamS sex pheromone cAM373 precursor DKL56_02185 PF02686 Glu-tRNAGln amidotransferase C subunit DKL56_02190 PF01425 Amidase DKL56_02195 PF02934 GatB/GatE catalytic domain DKL56_02195 PF02637 GatB domain DKL56_02200 PF00781 Diacylglycerol kinase catalytic domain DKL56_02205 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DKL56_02210 PF01027 Inhibitor of apoptosis-promoting Bax1 DKL56_02215 PF01938 TRAM domain DKL56_02215 PF05958 tRNA (Uracil-5-)-methyltransferase DKL56_02220 PF13443 Cro/C1-type HTH DNA-binding domain DKL56_02225 PF00145 C-5 cytosine-specific DNA methylase DKL56_02230 PF00145 C-5 cytosine-specific DNA methylase DKL56_02255 PF00072 Response regulator receiver domain DKL56_02255 PF04397 LytTr DNA-binding domain DKL56_02260 PF03352 Methyladenine glycosylase DKL56_02260 PF00117 Glutamine amidotransferase class-I DKL56_02260 PF00958 GMP synthase C terminal domain DKL56_02260 PF13302 Acetyltransferase (GNAT) domain DKL56_02260 PF13673 Acetyltransferase (GNAT) domain DKL56_02270 PF12161 HsdM N-terminal domain DKL56_02270 PF02384 N-6 DNA Methylase DKL56_02280 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DKL56_02280 PF18766 SWI2/SNF2 ATPase DKL56_02280 PF12008 Type I restriction and modification enzyme - subunit R C terminal DKL56_02295 PF04073 Aminoacyl-tRNA editing domain DKL56_02300 PF01380 SIS domain DKL56_02300 PF01418 Helix-turn-helix domain, rpiR family DKL56_02305 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase DKL56_02310 PF02378 Phosphotransferase system, EIIC DKL56_02310 PF00367 phosphotransferase system, EIIB DKL56_02310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_02315 PF01979 Amidohydrolase family DKL56_02320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DKL56_02320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DKL56_02330 PF00271 Helicase conserved C-terminal domain DKL56_02330 PF00270 DEAD/DEAH box helicase DKL56_02335 PF02378 Phosphotransferase system, EIIC DKL56_02355 PF02350 UDP-N-acetylglucosamine 2-epimerase DKL56_02365 PF00258 Flavodoxin DKL56_02365 PF00667 FAD binding domain DKL56_02365 PF00175 Oxidoreductase NAD-binding domain DKL56_02370 PF00557 Metallopeptidase family M24 DKL56_02380 PF00483 Nucleotidyl transferase DKL56_02385 PF00108 Thiolase, N-terminal domain DKL56_02385 PF02803 Thiolase, C-terminal domain DKL56_02390 PF00368 Hydroxymethylglutaryl-coenzyme A reductase DKL56_02395 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal DKL56_02395 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal DKL56_02415 PF01938 TRAM domain DKL56_02415 PF05958 tRNA (Uracil-5-)-methyltransferase DKL56_02420 PF02631 RecX family DKL56_02435 PF01595 Cyclin M transmembrane N-terminal domain DKL56_02435 PF03471 Transporter associated domain DKL56_02435 PF00571 CBS domain DKL56_02440 PF00009 Elongation factor Tu GTP binding domain DKL56_02440 PF16658 Class II release factor RF3, C-terminal domain DKL56_02450 PF17871 AAA lid domain DKL56_02450 PF10431 C-terminal, D2-small domain, of ClpB protein DKL56_02450 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_02450 PF07724 AAA domain (Cdc48 subfamily) DKL56_02460 PF00381 PTS HPr component phosphorylation site DKL56_02465 PF02896 PEP-utilising enzyme, TIM barrel domain DKL56_02465 PF00391 PEP-utilising enzyme, mobile domain DKL56_02465 PF05524 PEP-utilising enzyme, N-terminal DKL56_02470 PF03960 ArsC family DKL56_02475 PF05389 Negative regulator of genetic competence (MecA) DKL56_02495 PF04607 Region found in RelA / SpoT proteins DKL56_02500 PF01513 ATP-NAD kinase DKL56_02505 PF00849 RNA pseudouridylate synthase DKL56_02510 PF10282 Lactonase, 7-bladed beta-propeller DKL56_02515 PF00689 Cation transporting ATPase, C-terminus DKL56_02515 PF00690 Cation transporter/ATPase, N-terminus DKL56_02525 PF01594 AI-2E family transporter DKL56_02530 PF00588 SpoU rRNA Methylase family DKL56_02540 PF17854 FtsK alpha domain DKL56_02540 PF09397 Ftsk gamma domain DKL56_02540 PF01580 FtsK/SpoIIIE family DKL56_02550 PF13464 Domain of unknown function (DUF4115) DKL56_02555 PF01066 CDP-alcohol phosphatidyltransferase DKL56_02560 PF00005 ABC transporter DKL56_02560 PF00571 CBS domain DKL56_02565 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DKL56_02575 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_02580 PF00154 recA bacterial DNA recombination protein DKL56_02585 PF01966 HD domain DKL56_02585 PF12072 Domain of unknown function (DUF3552) DKL56_02585 PF00013 KH domain DKL56_02590 PF00953 Glycosyl transferase family 4 DKL56_02595 PF01205 Uncharacterized protein family UPF0029 DKL56_02595 PF09186 Domain of unknown function (DUF1949) DKL56_02600 PF04851 Type III restriction enzyme, res subunit DKL56_02600 PF00271 Helicase conserved C-terminal domain DKL56_02610 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DKL56_02610 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DKL56_02615 PF07517 SecA DEAD-like domain DKL56_02615 PF01043 SecA preprotein cross-linking domain DKL56_02615 PF07516 SecA Wing and Scaffold domain DKL56_02630 PF07475 HPr Serine kinase C-terminal domain DKL56_02630 PF02603 HPr Serine kinase N terminus DKL56_02635 PF01790 Prolipoprotein diacylglyceryl transferase DKL56_02640 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DKL56_02640 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DKL56_02645 PF07992 Pyridine nucleotide-disulphide oxidoreductase DKL56_02650 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKL56_02650 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKL56_02650 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKL56_02650 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKL56_02655 PF02151 UvrB/uvrC motif DKL56_02655 PF12344 Ultra-violet resistance protein B DKL56_02655 PF17757 UvrB interaction domain DKL56_02655 PF00271 Helicase conserved C-terminal domain DKL56_02655 PF04851 Type III restriction enzyme, res subunit DKL56_02660 PF17755 UvrA DNA-binding domain DKL56_02660 PF17760 UvrA interaction domain DKL56_02660 PF00005 ABC transporter DKL56_02670 PF03668 P-loop ATPase protein family DKL56_02675 PF01933 Uncharacterised protein family UPF0052 DKL56_02680 PF02650 WhiA C-terminal HTH domain DKL56_02680 PF14527 WhiA LAGLIDADG-like domain DKL56_02680 PF10298 WhiA N-terminal LAGLIDADG-like domain DKL56_02685 PF00574 Clp protease DKL56_02700 PF13520 Amino acid permease DKL56_02710 PF00005 ABC transporter DKL56_02725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKL56_02725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKL56_02730 PF04198 Putative sugar-binding domain DKL56_02735 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKL56_02735 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKL56_02740 PF00162 Phosphoglycerate kinase DKL56_02745 PF00121 Triosephosphate isomerase DKL56_02770 PF00248 Aldo/keto reductase family DKL56_02780 PF00664 ABC transporter transmembrane region DKL56_02780 PF00005 ABC transporter DKL56_02800 PF03167 Uracil DNA glycosylase superfamily DKL56_02805 PF01515 Phosphate acetyl/butaryl transferase DKL56_02810 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DKL56_02820 PF01565 FAD binding domain DKL56_02820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DKL56_02825 PF02457 DisA bacterial checkpoint controller nucleotide-binding DKL56_02835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DKL56_02835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DKL56_02835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DKL56_02835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DKL56_02840 PF01380 SIS domain DKL56_02850 PF03965 Penicillinase repressor DKL56_02865 PF00534 Glycosyl transferases group 1 DKL56_02865 PF17101 Stealth protein CR1, conserved region 1 DKL56_02865 PF17103 Stealth protein CR4, conserved region 4 DKL56_02865 PF11380 Stealth protein CR2, conserved region 2 DKL56_02865 PF17102 Stealth protein CR3, conserved region 3 DKL56_02870 PF00534 Glycosyl transferases group 1 DKL56_02875 PF07690 Major Facilitator Superfamily DKL56_02885 PF00571 CBS domain DKL56_02885 PF00478 IMP dehydrogenase / GMP reductase domain DKL56_02895 PF00403 Heavy-metal-associated domain DKL56_02905 PF00005 ABC transporter DKL56_02915 PF13520 Amino acid permease DKL56_02920 PF01709 Transcriptional regulator DKL56_02925 PF01156 Inosine-uridine preferring nucleoside hydrolase DKL56_02930 PF03606 C4-dicarboxylate anaerobic carrier DKL56_02935 PF00437 Type II/IV secretion system protein DKL56_02965 PF02384 N-6 DNA Methylase DKL56_02970 PF00871 Acetokinase family DKL56_02990 PF00589 Phage integrase family DKL56_02990 PF14659 Phage integrase, N-terminal SAM-like domain DKL56_03005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_03005 PF03466 LysR substrate binding domain DKL56_03010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKL56_03010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKL56_03015 PF01266 FAD dependent oxidoreductase DKL56_03015 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DKL56_03020 PF01238 Phosphomannose isomerase type I DKL56_03030 PF00072 Response regulator receiver domain DKL56_03030 PF00486 Transcriptional regulatory protein, C terminal DKL56_03035 PF00672 HAMP domain DKL56_03035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_03035 PF00512 His Kinase A (phospho-acceptor) domain DKL56_03045 PF00884 Sulfatase DKL56_03055 PF00342 Phosphoglucose isomerase DKL56_03060 PF07690 Major Facilitator Superfamily DKL56_03070 PF13419 Haloacid dehalogenase-like hydrolase DKL56_03080 PF00933 Glycosyl hydrolase family 3 N terminal domain DKL56_03085 PF12833 Helix-turn-helix domain DKL56_03085 PF17853 GGDEF-like domain DKL56_03095 PF02378 Phosphotransferase system, EIIC DKL56_03100 PF00232 Glycosyl hydrolase family 1 DKL56_03105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_03110 PF00144 Beta-lactamase DKL56_03125 PF12558 ATP-binding cassette cobalt transporter DKL56_03125 PF00005 ABC transporter DKL56_03150 PF00232 Glycosyl hydrolase family 1 DKL56_03155 PF02378 Phosphotransferase system, EIIC DKL56_03155 PF00367 phosphotransferase system, EIIB DKL56_03155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_03160 PF00874 PRD domain DKL56_03160 PF03123 CAT RNA binding domain DKL56_03165 PF08245 Mur ligase middle domain DKL56_03165 PF08353 Domain of unknown function (DUF1727) DKL56_03170 PF00265 Thymidine kinase DKL56_03175 PF00472 RF-1 domain DKL56_03175 PF03462 PCRF domain DKL56_03180 PF05175 Methyltransferase small domain DKL56_03185 PF03481 Putative GTP-binding controlling metal-binding DKL56_03185 PF01300 Telomere recombination DKL56_03195 PF00119 ATP synthase A chain DKL56_03200 PF00137 ATP synthase subunit C DKL56_03205 PF00430 ATP synthase B/B' CF(0) DKL56_03210 PF00213 ATP synthase delta (OSCP) subunit DKL56_03215 PF00306 ATP synthase alpha/beta chain, C terminal domain DKL56_03215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKL56_03215 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKL56_03220 PF00231 ATP synthase DKL56_03225 PF02874 ATP synthase alpha/beta family, beta-barrel domain DKL56_03225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DKL56_03230 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DKL56_03230 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DKL56_03245 PF01809 Putative membrane protein insertion efficiency factor DKL56_03255 PF01098 Cell cycle protein DKL56_03260 PF00582 Universal stress protein family DKL56_03275 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKL56_03275 PF12002 MgsA AAA+ ATPase C terminal DKL56_03275 PF16193 AAA C-terminal domain DKL56_03285 PF01479 S4 domain DKL56_03285 PF00163 Ribosomal protein S4/S9 N-terminal domain DKL56_03290 PF06160 Septation ring formation regulator, EzrA DKL56_03295 PF00266 Aminotransferase class-V DKL56_03300 PF02926 THUMP domain DKL56_03300 PF02568 Thiamine biosynthesis protein (ThiI) DKL56_03305 PF00133 tRNA synthetases class I (I, L, M and V) DKL56_03305 PF10458 Valyl tRNA synthetase tRNA binding arm DKL56_03305 PF08264 Anticodon-binding domain of tRNA DKL56_03310 PF08245 Mur ligase middle domain DKL56_03310 PF02875 Mur ligase family, glutamate ligase domain DKL56_03315 PF13419 Haloacid dehalogenase-like hydrolase DKL56_03320 PF04002 RadC-like JAB domain DKL56_03330 PF04085 rod shape-determining protein MreC DKL56_03350 PF02381 MraZ protein, putative antitoxin-like DKL56_03355 PF01795 MraW methylase family DKL56_03370 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DKL56_03370 PF00953 Glycosyl transferase family 4 DKL56_03375 PF08245 Mur ligase middle domain DKL56_03375 PF02875 Mur ligase family, glutamate ligase domain DKL56_03380 PF04101 Glycosyltransferase family 28 C-terminal domain DKL56_03380 PF03033 Glycosyltransferase family 28 N-terminal domain DKL56_03385 PF03799 Cell division protein FtsQ DKL56_03385 PF08478 POTRA domain, FtsQ-type DKL56_03390 PF02491 SHS2 domain inserted in FTSA DKL56_03390 PF11983 Membrane-attachment and polymerisation-promoting switch DKL56_03395 PF12327 FtsZ family, C-terminal domain DKL56_03395 PF00091 Tubulin/FtsZ family, GTPase domain DKL56_03400 PF04472 Cell division protein SepF DKL56_03415 PF05103 DivIVA protein DKL56_03420 PF08264 Anticodon-binding domain of tRNA DKL56_03420 PF00133 tRNA synthetases class I (I, L, M and V) DKL56_03420 PF06827 Zinc finger found in FPG and IleRS DKL56_03425 PF00313 'Cold-shock' DNA-binding domain DKL56_03430 PF00293 NUDIX domain DKL56_03440 PF01048 Phosphorylase superfamily DKL56_03445 PF00266 Aminotransferase class-V DKL56_03460 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_03470 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DKL56_03470 PF14490 Helix-hairpin-helix containing domain DKL56_03470 PF13538 UvrD-like helicase C-terminal domain DKL56_03480 PF00005 ABC transporter DKL56_03495 PF00781 Diacylglycerol kinase catalytic domain DKL56_03500 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DKL56_03500 PF17770 Ribonuclease J C-terminal domain DKL56_03500 PF00753 Metallo-beta-lactamase superfamily DKL56_03510 PF01327 Polypeptide deformylase DKL56_03520 PF01098 Cell cycle protein DKL56_03525 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) DKL56_03535 PF01467 Cytidylyltransferase-like DKL56_03540 PF13180 PDZ domain DKL56_03540 PF05362 Lon protease (S16) C-terminal proteolytic domain DKL56_03550 PF03772 Competence protein DKL56_03550 PF13567 Domain of unknown function (DUF4131) DKL56_03550 PF00753 Metallo-beta-lactamase superfamily DKL56_03555 PF06144 DNA polymerase III, delta subunit DKL56_03560 PF01649 Ribosomal protein S20 DKL56_03565 PF00312 Ribosomal protein S15 DKL56_03570 PF17770 Ribonuclease J C-terminal domain DKL56_03570 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DKL56_03570 PF00753 Metallo-beta-lactamase superfamily DKL56_03580 PF03144 Elongation factor Tu domain 2 DKL56_03580 PF00009 Elongation factor Tu GTP binding domain DKL56_03580 PF03143 Elongation factor Tu C-terminal domain DKL56_03585 PF05697 Bacterial trigger factor protein (TF) DKL56_03585 PF05698 Bacterial trigger factor protein (TF) C-terminus DKL56_03585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DKL56_03590 PF07724 AAA domain (Cdc48 subfamily) DKL56_03590 PF06689 ClpX C4-type zinc finger DKL56_03590 PF10431 C-terminal, D2-small domain, of ClpB protein DKL56_03595 PF01926 50S ribosome-binding GTPase DKL56_03600 PF01541 GIY-YIG catalytic domain DKL56_03600 PF08459 UvrC Helix-hairpin-helix N-terminal DKL56_03600 PF02151 UvrB/uvrC motif DKL56_03605 PF01926 50S ribosome-binding GTPase DKL56_03605 PF01018 GTP1/OBG DKL56_03605 PF09269 Domain of unknown function (DUF1967) DKL56_03610 PF01757 Acyltransferase family DKL56_03615 PF00753 Metallo-beta-lactamase superfamily DKL56_03620 PF00106 short chain dehydrogenase DKL56_03630 PF01783 Ribosomal L32p protein family DKL56_03635 PF02872 5'-nucleotidase, C-terminal domain DKL56_03635 PF00149 Calcineurin-like phosphoesterase DKL56_03645 PF01336 OB-fold nucleic acid binding domain DKL56_03645 PF14579 Helix-hairpin-helix motif DKL56_03645 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DKL56_03645 PF07733 Bacterial DNA polymerase III alpha NTPase domain DKL56_03645 PF02811 PHP domain DKL56_03650 PF00365 Phosphofructokinase DKL56_03655 PF00224 Pyruvate kinase, barrel domain DKL56_03655 PF00391 PEP-utilising enzyme, mobile domain DKL56_03655 PF02887 Pyruvate kinase, alpha/beta domain DKL56_03660 PF17783 CvfB-like winged helix domain DKL56_03660 PF13509 S1 domain DKL56_03665 PF00589 Phage integrase family DKL56_03665 PF02899 Phage integrase, N-terminal SAM-like domain DKL56_03670 PF00583 Acetyltransferase (GNAT) family DKL56_03675 PF02616 Segregation and condensation protein ScpA DKL56_03680 PF04079 Segregation and condensation complex subunit ScpB DKL56_03685 PF01479 S4 domain DKL56_03685 PF00849 RNA pseudouridylate synthase DKL56_03700 PF02082 Transcriptional regulator DKL56_03705 PF01476 LysM domain DKL56_03705 PF05257 CHAP domain DKL56_03710 PF02224 Cytidylate kinase DKL56_03715 PF00575 S1 RNA binding domain DKL56_03720 PF01926 50S ribosome-binding GTPase DKL56_03720 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DKL56_03725 PF00216 Bacterial DNA-binding protein DKL56_03740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKL56_03740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKL56_03745 PF13735 tRNA nucleotidyltransferase domain 2 putative DKL56_03745 PF12627 Probable RNA and SrmB- binding site of polymerase A DKL56_03745 PF01743 Poly A polymerase head domain DKL56_03750 PF03006 Haemolysin-III related DKL56_03755 PF02645 Uncharacterised protein, DegV family COG1307 DKL56_03760 PF06855 YozE SAM-like fold DKL56_03765 PF01926 50S ribosome-binding GTPase DKL56_03770 PF01351 Ribonuclease HII DKL56_03775 PF02481 DNA recombination-mediator protein A DKL56_03775 PF18255 DNA processing protein A sterile alpha motif domain DKL56_03780 PF01131 DNA topoisomerase DKL56_03780 PF01396 Topoisomerase DNA binding C4 zinc finger DKL56_03780 PF01751 Toprim domain DKL56_03825 PF01134 Glucose inhibited division protein A DKL56_03830 PF00589 Phage integrase family DKL56_03830 PF02899 Phage integrase, N-terminal SAM-like domain DKL56_03835 PF00227 Proteasome subunit DKL56_03840 PF07724 AAA domain (Cdc48 subfamily) DKL56_03840 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_03840 PF10431 C-terminal, D2-small domain, of ClpB protein DKL56_03850 PF07690 Major Facilitator Superfamily DKL56_03855 PF02660 Glycerol-3-phosphate acyltransferase DKL56_03860 PF01751 Toprim domain DKL56_03860 PF00204 DNA gyrase B DKL56_03860 PF00986 DNA gyrase B subunit, carboxyl terminus DKL56_03860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_03865 PF03989 DNA gyrase C-terminal domain, beta-propeller DKL56_03865 PF00521 DNA gyrase/topoisomerase IV, subunit A DKL56_03870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_03870 PF03466 LysR substrate binding domain DKL56_03875 PF02833 DHHA2 domain DKL56_03875 PF01368 DHH family DKL56_03885 PF00589 Phage integrase family DKL56_03885 PF13495 Phage integrase, N-terminal SAM-like domain DKL56_03895 PF02645 Uncharacterised protein, DegV family COG1307 DKL56_03910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKL56_03910 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKL56_03910 PF02142 MGS-like domain DKL56_03915 PF00117 Glutamine amidotransferase class-I DKL56_03915 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKL56_03920 PF01479 S4 domain DKL56_03920 PF00849 RNA pseudouridylate synthase DKL56_03925 PF01252 Signal peptidase (SPase) II DKL56_03930 PF01268 Formate--tetrahydrofolate ligase DKL56_03945 PF02926 THUMP domain DKL56_03945 PF01170 Putative RNA methylase family UPF0020 DKL56_03955 PF05103 DivIVA protein DKL56_03960 PF06908 YspA SLOG family DKL56_03965 PF03838 Recombination protein U DKL56_03970 PF00905 Penicillin binding protein transpeptidase domain DKL56_03970 PF00912 Transglycosylase DKL56_03975 PF00730 HhH-GPD superfamily base excision DNA repair protein DKL56_03975 PF00633 Helix-hairpin-helix motif DKL56_03975 PF10576 Iron-sulfur binding domain of endonuclease III DKL56_03980 PF07261 Replication initiation and membrane attachment DKL56_03985 PF00152 tRNA synthetases class II (D, K and N) DKL56_03985 PF01336 OB-fold nucleic acid binding domain DKL56_03995 PF04851 Type III restriction enzyme, res subunit DKL56_03995 PF00929 Exonuclease DKL56_03995 PF13307 Helicase C-terminal domain DKL56_04000 PF00580 UvrD/REP helicase N-terminal domain DKL56_04000 PF12705 PD-(D/E)XK nuclease superfamily DKL56_04000 PF13361 UvrD-like helicase C-terminal domain DKL56_04005 PF12705 PD-(D/E)XK nuclease superfamily DKL56_04010 PF00288 GHMP kinases N terminal domain DKL56_04010 PF08544 GHMP kinases C terminal DKL56_04020 PF00288 GHMP kinases N terminal domain DKL56_04020 PF08544 GHMP kinases C terminal DKL56_04025 PF01070 FMN-dependent dehydrogenase DKL56_04035 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF DKL56_04035 PF01189 16S rRNA methyltransferase RsmB/F DKL56_04035 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DKL56_04050 PF10502 Signal peptidase, peptidase S26 DKL56_04065 PF00005 ABC transporter DKL56_04075 PF00005 ABC transporter DKL56_04080 PF00392 Bacterial regulatory proteins, gntR family DKL56_04085 PF01546 Peptidase family M20/M25/M40 DKL56_04085 PF07687 Peptidase dimerisation domain DKL56_04090 PF01784 NIF3 (NGG1p interacting factor 3) DKL56_04095 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DKL56_04105 PF00293 NUDIX domain DKL56_04105 PF13344 Haloacid dehalogenase-like hydrolase DKL56_04115 PF03979 Sigma-70 factor, region 1.1 DKL56_04115 PF00140 Sigma-70 factor, region 1.2 DKL56_04115 PF04542 Sigma-70 region 2 DKL56_04115 PF04539 Sigma-70 region 3 DKL56_04115 PF04545 Sigma-70, region 4 DKL56_04120 PF01807 CHC2 zinc finger DKL56_04120 PF08275 DNA primase catalytic core, N-terminal domain DKL56_04120 PF10410 DnaB-helicase binding domain of primase DKL56_04125 PF02092 Glycyl-tRNA synthetase beta subunit DKL56_04125 PF05746 DALR anticodon binding domain DKL56_04130 PF02091 Glycyl-tRNA synthetase alpha subunit DKL56_04135 PF02565 Recombination protein O C terminal DKL56_04135 PF11967 Recombination protein O N terminal DKL56_04140 PF01926 50S ribosome-binding GTPase DKL56_04140 PF07650 KH domain DKL56_04145 PF02130 Uncharacterized protein family UPF0054 DKL56_04150 PF02562 PhoH-like protein DKL56_04160 PF01165 Ribosomal protein S21 DKL56_04165 PF03618 Kinase/pyrophosphorylase DKL56_04170 PF01625 Peptide methionine sulfoxide reductase DKL56_04175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKL56_04175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKL56_04180 PF01641 SelR domain DKL56_04185 PF00155 Aminotransferase class I and II DKL56_04190 PF08534 Redoxin DKL56_04195 PF16363 GDP-mannose 4,6 dehydratase DKL56_04205 PF01336 OB-fold nucleic acid binding domain DKL56_04205 PF00152 tRNA synthetases class II (D, K and N) DKL56_04205 PF02938 GAD domain DKL56_04210 PF03129 Anticodon binding domain DKL56_04210 PF13393 Histidyl-tRNA synthetase DKL56_04215 PF02580 D-Tyr-tRNA(Tyr) deacylase DKL56_04220 PF02824 TGS domain DKL56_04220 PF04607 Region found in RelA / SpoT proteins DKL56_04220 PF13291 ACT domain DKL56_04235 PF04073 Aminoacyl-tRNA editing domain DKL56_04245 PF00056 lactate/malate dehydrogenase, NAD binding domain DKL56_04245 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKL56_04250 PF14537 Cytochrome c3 DKL56_04250 PF00890 FAD binding domain DKL56_04255 PF00206 Lyase DKL56_04255 PF10415 Fumarase C C-terminus DKL56_04265 PF05525 Branched-chain amino acid transport protein DKL56_04270 PF03932 CutC family DKL56_04275 PF01112 Asparaginase DKL56_04285 PF00230 Major intrinsic protein DKL56_04300 PF00216 Bacterial DNA-binding protein DKL56_04305 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_04310 PF09383 NIL domain DKL56_04310 PF00005 ABC transporter DKL56_04315 PF03180 NLPA lipoprotein DKL56_04325 PF00186 Dihydrofolate reductase DKL56_04340 PF00999 Sodium/hydrogen exchanger family DKL56_04360 PF13411 MerR HTH family regulatory protein DKL56_04405 PF02645 Uncharacterised protein, DegV family COG1307 DKL56_04410 PF00113 Enolase, C-terminal TIM barrel domain DKL56_04410 PF03952 Enolase, N-terminal domain DKL56_04415 PF00403 Heavy-metal-associated domain DKL56_04425 PF00156 Phosphoribosyl transferase domain DKL56_04430 PF01368 DHH family DKL56_04430 PF02272 DHHA1 domain DKL56_04430 PF17768 RecJ OB domain DKL56_04430 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DKL56_04435 PF00009 Elongation factor Tu GTP binding domain DKL56_04435 PF00679 Elongation factor G C-terminus DKL56_04435 PF06421 GTP-binding protein LepA C-terminus DKL56_04435 PF03144 Elongation factor Tu domain 2 DKL56_04440 PF01556 DnaJ C terminal domain DKL56_04440 PF00684 DnaJ central domain DKL56_04440 PF00226 DnaJ domain DKL56_04445 PF00012 Hsp70 protein DKL56_04450 PF01025 GrpE DKL56_04455 PF01628 HrcA protein C terminal domain DKL56_04455 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DKL56_04460 PF01687 Riboflavin kinase DKL56_04460 PF06574 FAD synthetase DKL56_04465 PF01509 TruB family pseudouridylate synthase (N terminal domain) DKL56_04465 PF16198 tRNA pseudouridylate synthase B C-terminal domain DKL56_04470 PF02033 Ribosome-binding factor A DKL56_04475 PF00009 Elongation factor Tu GTP binding domain DKL56_04475 PF11987 Translation-initiation factor 2 DKL56_04475 PF04760 Translation initiation factor IF-2, N-terminal region DKL56_04480 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DKL56_04485 PF04296 Protein of unknown function (DUF448) DKL56_04490 PF08529 NusA N-terminal domain DKL56_04490 PF00575 S1 RNA binding domain DKL56_04490 PF13184 NusA-like KH domain DKL56_04495 PF17384 RimP C-terminal SH3 domain DKL56_04495 PF02576 RimP N-terminal domain DKL56_04500 PF11490 DNA polymerase III polC-type N-terminus II DKL56_04500 PF14579 Helix-hairpin-helix motif DKL56_04500 PF02811 PHP domain DKL56_04500 PF00929 Exonuclease DKL56_04500 PF14480 DNA polymerase III polC-type N-terminus I DKL56_04500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DKL56_04500 PF01336 OB-fold nucleic acid binding domain DKL56_04500 PF07733 Bacterial DNA polymerase III alpha NTPase domain DKL56_04505 PF03129 Anticodon binding domain DKL56_04505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKL56_04505 PF04073 Aminoacyl-tRNA editing domain DKL56_04510 PF17820 PDZ domain DKL56_04510 PF02163 Peptidase family M50 DKL56_04520 PF01255 Putative undecaprenyl diphosphate synthase DKL56_04525 PF01765 Ribosome recycling factor DKL56_04530 PF00696 Amino acid kinase family DKL56_04535 PF14537 Cytochrome c3 DKL56_04535 PF00890 FAD binding domain DKL56_04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_04540 PF03466 LysR substrate binding domain DKL56_04545 PF00480 ROK family DKL56_04550 PF00889 Elongation factor TS DKL56_04555 PF00318 Ribosomal protein S2 DKL56_04560 PF01541 GIY-YIG catalytic domain DKL56_04565 PF01553 Acyltransferase DKL56_04575 PF01565 FAD binding domain DKL56_04575 PF02913 FAD linked oxidases, C-terminal domain DKL56_04580 PF00005 ABC transporter DKL56_04580 PF00664 ABC transporter transmembrane region DKL56_04585 PF00664 ABC transporter transmembrane region DKL56_04585 PF00005 ABC transporter DKL56_04590 PF03672 Uncharacterised protein family (UPF0154) DKL56_04595 PF05979 Bacterial protein of unknown function (DUF896) DKL56_04600 PF00717 Peptidase S24-like DKL56_04600 PF01726 LexA DNA binding domain DKL56_04610 PF01245 Ribosomal protein L19 DKL56_04615 PF01746 tRNA (Guanine-1)-methyltransferase DKL56_04620 PF05239 PRC-barrel domain DKL56_04620 PF01782 RimM N-terminal domain DKL56_04625 PF00886 Ribosomal protein S16 DKL56_04630 PF02978 Signal peptide binding domain DKL56_04630 PF02881 SRP54-type protein, helical bundle domain DKL56_04630 PF00448 SRP54-type protein, GTPase domain DKL56_04635 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DKL56_04640 PF13520 Amino acid permease DKL56_04645 PF03577 Peptidase family C69 DKL56_04650 PF02881 SRP54-type protein, helical bundle domain DKL56_04650 PF00448 SRP54-type protein, GTPase domain DKL56_04655 PF06470 SMC proteins Flexible Hinge Domain DKL56_04655 PF02463 RecF/RecN/SMC N terminal domain DKL56_04660 PF00035 Double-stranded RNA binding motif DKL56_04660 PF14622 Ribonuclease-III-like DKL56_04665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_04670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_04675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_04680 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_04685 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_04690 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_04695 PF00005 ABC transporter DKL56_04695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKL56_04700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DKL56_04700 PF00005 ABC transporter DKL56_04705 PF00550 Phosphopantetheine attachment site DKL56_04710 PF02504 Fatty acid synthesis protein DKL56_04715 PF00270 DEAD/DEAH box helicase DKL56_04715 PF00271 Helicase conserved C-terminal domain DKL56_04715 PF17191 RecG wedge domain DKL56_04720 PF02734 DAK2 domain DKL56_04720 PF13684 Dihydroxyacetone kinase family DKL56_04725 PF03780 Asp23 family, cell envelope-related function DKL56_04730 PF00830 Ribosomal L28 family DKL56_04740 PF00834 Ribulose-phosphate 3 epimerase family DKL56_04745 PF16745 RsgA N-terminal domain DKL56_04745 PF03193 RsgA GTPase DKL56_04750 PF03793 PASTA domain DKL56_04750 PF00069 Protein kinase domain DKL56_04760 PF01029 NusB family DKL56_04760 PF01189 16S rRNA methyltransferase RsmB/F DKL56_04765 PF02911 Formyl transferase, C-terminal domain DKL56_04765 PF00551 Formyl transferase DKL56_04770 PF18074 Primosomal protein N C-terminal domain DKL56_04770 PF00271 Helicase conserved C-terminal domain DKL56_04770 PF04851 Type III restriction enzyme, res subunit DKL56_04770 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DKL56_04770 PF17764 3′ DNA-binding domain (3′BD) DKL56_04775 PF01192 RNA polymerase Rpb6 DKL56_04780 PF00625 Guanylate kinase DKL56_04795 PF13476 AAA domain DKL56_04800 PF01479 S4 domain DKL56_04800 PF01728 FtsJ-like methyltransferase DKL56_04805 PF00348 Polyprenyl synthetase DKL56_04810 PF02609 Exonuclease VII small subunit DKL56_04815 PF13742 OB-fold nucleic acid binding domain DKL56_04815 PF02601 Exonuclease VII, large subunit DKL56_04820 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DKL56_04820 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DKL56_04825 PF01029 NusB family DKL56_04830 PF03780 Asp23 family, cell envelope-related function DKL56_04835 PF09285 Elongation factor P, C-terminal DKL56_04835 PF01132 Elongation factor P (EF-P) OB domain DKL56_04835 PF08207 Elongation factor P (EF-P) KOW-like domain DKL56_04840 PF01321 Creatinase/Prolidase N-terminal domain DKL56_04840 PF00557 Metallopeptidase family M24 DKL56_04845 PF01016 Ribosomal L27 protein DKL56_04850 PF00829 Ribosomal prokaryotic L21 protein DKL56_04855 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DKL56_04855 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DKL56_04890 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DKL56_04890 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DKL56_04890 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal DKL56_04905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DKL56_04905 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DKL56_04905 PF02142 MGS-like domain DKL56_04910 PF00117 Glutamine amidotransferase class-I DKL56_04910 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DKL56_04915 PF01979 Amidohydrolase family DKL56_04920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DKL56_04920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DKL56_04925 PF00156 Phosphoribosyl transferase domain DKL56_04930 PF01180 Dihydroorotate dehydrogenase DKL56_04935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DKL56_04940 PF00156 Phosphoribosyl transferase domain DKL56_04950 PF03951 Glutamine synthetase, beta-Grasp domain DKL56_04950 PF00120 Glutamine synthetase, catalytic domain DKL56_04955 PF06838 Methionine gamma-lyase DKL56_04980 PF01812 5-formyltetrahydrofolate cyclo-ligase family DKL56_04985 PF00471 Ribosomal protein L33 DKL56_04995 PF01869 BadF/BadG/BcrA/BcrD ATPase family DKL56_05000 PF01272 Transcription elongation factor, GreA/GreB, C-term DKL56_05000 PF03449 Transcription elongation factor, N-terminal DKL56_05005 PF03484 tRNA synthetase B5 domain DKL56_05005 PF03147 Ferredoxin-fold anticodon binding domain DKL56_05005 PF03483 B3/4 domain DKL56_05005 PF01588 Putative tRNA binding domain DKL56_05005 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DKL56_05010 PF01409 tRNA synthetases class II core domain (F) DKL56_05010 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DKL56_05015 PF01638 HxlR-like helix-turn-helix DKL56_05020 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKL56_05020 PF00588 SpoU rRNA Methylase family DKL56_05025 PF00708 Acylphosphatase DKL56_05030 PF02096 60Kd inner membrane protein DKL56_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DKL56_05035 PF00512 His Kinase A (phospho-acceptor) domain DKL56_05035 PF18719 ArlS sensor domain DKL56_05040 PF00072 Response regulator receiver domain DKL56_05040 PF00486 Transcriptional regulatory protein, C terminal DKL56_05050 PF05636 HIGH Nucleotidyl Transferase DKL56_05060 PF01966 HD domain DKL56_05065 PF01467 Cytidylyltransferase-like DKL56_05070 PF01926 50S ribosome-binding GTPase DKL56_05080 PF00453 Ribosomal protein L20 DKL56_05085 PF01632 Ribosomal protein L35 DKL56_05090 PF05198 Translation initiation factor IF-3, N-terminal domain DKL56_05090 PF00707 Translation initiation factor IF-3, C-terminal domain DKL56_05095 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_05100 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_05105 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKL56_05110 PF00005 ABC transporter DKL56_05115 PF03129 Anticodon binding domain DKL56_05115 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DKL56_05115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DKL56_05115 PF02824 TGS domain DKL56_05120 PF07319 Primosomal protein DnaI N-terminus DKL56_05120 PF01695 IstB-like ATP binding protein DKL56_05125 PF07261 Replication initiation and membrane attachment DKL56_05130 PF03477 ATP cone domain DKL56_05135 PF01121 Dephospho-CoA kinase DKL56_05140 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DKL56_05140 PF06827 Zinc finger found in FPG and IleRS DKL56_05140 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DKL56_05145 PF01367 5'-3' exonuclease, C-terminal SAM fold DKL56_05145 PF00476 DNA polymerase family A DKL56_05145 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DKL56_05160 PF01225 Mur ligase family, catalytic domain DKL56_05160 PF02875 Mur ligase family, glutamate ligase domain DKL56_05160 PF08245 Mur ligase middle domain DKL56_05165 PF14794 Domain of unknown function (DUF4479) DKL56_05165 PF01588 Putative tRNA binding domain DKL56_05170 PF00085 Thioredoxin DKL56_05175 PF02390 Putative methyltransferase DKL56_05180 PF05975 Bacterial ABC transporter protein EcsB DKL56_05185 PF00005 ABC transporter DKL56_05190 PF01230 HIT domain DKL56_05205 PF01966 HD domain DKL56_05210 PF13514 AAA domain DKL56_05215 PF00149 Calcineurin-like phosphoesterase DKL56_05220 PF06133 Control of competence regulator ComK, YlbF/YmcA DKL56_05225 PF00905 Penicillin binding protein transpeptidase domain DKL56_05225 PF00912 Transglycosylase DKL56_05230 PF00849 RNA pseudouridylate synthase DKL56_05250 PF03609 PTS system sorbose-specific iic component DKL56_05255 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_05260 PF00561 alpha/beta hydrolase fold DKL56_05265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DKL56_05275 PF00890 FAD binding domain DKL56_05280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_05280 PF03466 LysR substrate binding domain DKL56_05285 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_05290 PF00248 Aldo/keto reductase family DKL56_05295 PF01116 Fructose-bisphosphate aldolase class-II DKL56_05300 PF05746 DALR anticodon binding domain DKL56_05300 PF03485 Arginyl tRNA synthetase N terminal domain DKL56_05300 PF00750 tRNA synthetases class I (R) DKL56_05305 PF03734 L,D-transpeptidase catalytic domain DKL56_05310 PF01256 Carbohydrate kinase DKL56_05315 PF07943 Penicillin-binding protein 5, C-terminal domain DKL56_05315 PF00768 D-alanyl-D-alanine carboxypeptidase DKL56_05335 PF14667 Polysaccharide biosynthesis C-terminal domain DKL56_05335 PF01943 Polysaccharide biosynthesis protein DKL56_05340 PF08264 Anticodon-binding domain of tRNA DKL56_05340 PF09334 tRNA synthetases class I (M) DKL56_05340 PF13603 Leucyl-tRNA synthetase, Domain 2 DKL56_05340 PF00133 tRNA synthetases class I (I, L, M and V) DKL56_05355 PF00005 ABC transporter DKL56_05365 PF07690 Major Facilitator Superfamily DKL56_05370 PF00438 S-adenosylmethionine synthetase, N-terminal domain DKL56_05370 PF02773 S-adenosylmethionine synthetase, C-terminal domain DKL56_05370 PF02772 S-adenosylmethionine synthetase, central domain DKL56_05385 PF02378 Phosphotransferase system, EIIC DKL56_05390 PF00232 Glycosyl hydrolase family 1 DKL56_05395 PF01380 SIS domain DKL56_05395 PF01418 Helix-turn-helix domain, rpiR family DKL56_05450 PF00270 DEAD/DEAH box helicase DKL56_05450 PF00271 Helicase conserved C-terminal domain DKL56_05455 PF01368 DHH family DKL56_05455 PF02272 DHHA1 domain DKL56_05460 PF00817 impB/mucB/samB family DKL56_05460 PF11799 impB/mucB/samB family C-terminal domain DKL56_05465 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DKL56_05465 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DKL56_05470 PF02699 Preprotein translocase subunit DKL56_05475 PF17864 RuvB AAA lid domain DKL56_05475 PF05491 RuvB C-terminal winged helix domain DKL56_05475 PF05496 Holliday junction DNA helicase RuvB P-loop domain DKL56_05480 PF07499 RuvA, C-terminal domain DKL56_05480 PF01330 RuvA N terminal domain DKL56_05485 PF01119 DNA mismatch repair protein, C-terminal domain DKL56_05485 PF08676 MutL C terminal dimerisation domain DKL56_05490 PF05188 MutS domain II DKL56_05490 PF05190 MutS family domain IV DKL56_05490 PF05192 MutS domain III DKL56_05490 PF00488 MutS domain V DKL56_05490 PF01624 MutS domain I DKL56_05495 PF01470 Pyroglutamyl peptidase DKL56_05510 PF00118 TCP-1/cpn60 chaperonin family DKL56_05515 PF00166 Chaperonin 10 Kd subunit DKL56_05520 PF06971 Putative DNA-binding protein N-terminus DKL56_05520 PF02629 CoA binding domain DKL56_05525 PF12848 ABC transporter DKL56_05525 PF16326 ABC transporter C-terminal domain DKL56_05525 PF00005 ABC transporter DKL56_05530 PF02567 Phenazine biosynthesis-like protein DKL56_05540 PF00814 Glycoprotease family DKL56_05550 PF00814 Glycoprotease family DKL56_05555 PF12822 ECF transporter, substrate-specific component DKL56_05565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DKL56_05570 PF06156 Initiation control protein YabA DKL56_05575 PF09115 DNA polymerase III, delta subunit, C terminal DKL56_05580 PF06153 Cyclic-di-AMP receptor DKL56_05585 PF02223 Thymidylate kinase DKL56_05595 PF02132 RecR protein DKL56_05595 PF13662 Toprim domain DKL56_05600 PF02575 YbaB/EbfC DNA-binding family DKL56_05605 PF12169 DNA polymerase III subunits gamma and tau domain III DKL56_05615 PF14437 MafB19-like deaminase DKL56_05620 PF05175 Methyltransferase small domain DKL56_05630 PF16320 Ribosomal protein L7/L12 dimerisation domain DKL56_05630 PF00542 Ribosomal protein L7/L12 C-terminal domain DKL56_05635 PF00466 Ribosomal protein L10 DKL56_05640 PF01895 PhoU domain DKL56_05645 PF00005 ABC transporter DKL56_05650 PF00005 ABC transporter DKL56_05655 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_05660 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_05665 PF12849 PBP superfamily domain DKL56_05670 PF00687 Ribosomal protein L1p/L10e family DKL56_05675 PF03946 Ribosomal protein L11, N-terminal domain DKL56_05675 PF00298 Ribosomal protein L11, RNA binding domain DKL56_05680 PF00467 KOW motif DKL56_05680 PF02357 Transcription termination factor nusG DKL56_05690 PF00471 Ribosomal protein L33 DKL56_05705 PF08032 RNA 2'-O ribose methyltransferase substrate binding DKL56_05705 PF00588 SpoU rRNA Methylase family DKL56_05710 PF00636 Ribonuclease III domain DKL56_05715 PF01406 tRNA synthetases class I (C) catalytic domain DKL56_05715 PF09190 DALR domain DKL56_05720 PF00749 tRNA synthetases class I (E and Q), catalytic domain DKL56_05725 PF18073 Rubredoxin metal binding domain DKL56_05730 PF00692 dUTPase DKL56_05740 PF03051 Peptidase C1-like family DKL56_05745 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DKL56_05745 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DKL56_05750 PF00288 GHMP kinases N terminal domain DKL56_05750 PF08544 GHMP kinases C terminal DKL56_05750 PF10509 Galactokinase galactose-binding signature DKL56_05760 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_05770 PF01545 Cation efflux family DKL56_05775 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_05810 PF00005 ABC transporter DKL56_05820 PF02378 Phosphotransferase system, EIIC DKL56_05825 PF00232 Glycosyl hydrolase family 1 DKL56_05910 PF07748 Glycosyl hydrolases family 38 C-terminal domain DKL56_05910 PF09261 Alpha mannosidase middle domain DKL56_05910 PF01074 Glycosyl hydrolases family 38 N-terminal domain DKL56_05915 PF07748 Glycosyl hydrolases family 38 C-terminal domain DKL56_05915 PF09261 Alpha mannosidase middle domain DKL56_05915 PF01074 Glycosyl hydrolases family 38 N-terminal domain DKL56_05920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_05925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_05940 PF00535 Glycosyl transferase family 2 DKL56_05965 PF00005 ABC transporter DKL56_05970 PF02687 FtsX-like permease family DKL56_05970 PF00005 ABC transporter DKL56_05970 PF12704 MacB-like periplasmic core domain DKL56_05985 PF00380 Ribosomal protein S9/S16 DKL56_05990 PF00572 Ribosomal protein L13 DKL56_05995 PF01416 tRNA pseudouridine synthase DKL56_06000 PF02361 Cobalt transport protein DKL56_06005 PF00005 ABC transporter DKL56_06010 PF00005 ABC transporter DKL56_06015 PF01196 Ribosomal protein L17 DKL56_06020 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DKL56_06020 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DKL56_06020 PF01000 RNA polymerase Rpb3/RpoA insert domain DKL56_06025 PF00411 Ribosomal protein S11 DKL56_06030 PF00416 Ribosomal protein S13/S18 DKL56_06035 PF00444 Ribosomal protein L36 DKL56_06040 PF01176 Translation initiation factor 1A / IF-1 DKL56_06045 PF05191 Adenylate kinase, active site lid DKL56_06050 PF00344 SecY translocase DKL56_06055 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DKL56_06060 PF00327 Ribosomal protein L30p/L7e DKL56_06065 PF03719 Ribosomal protein S5, C-terminal domain DKL56_06065 PF00333 Ribosomal protein S5, N-terminal domain DKL56_06070 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DKL56_06075 PF00347 Ribosomal protein L6 DKL56_06080 PF00410 Ribosomal protein S8 DKL56_06085 PF00253 Ribosomal protein S14p/S29e DKL56_06090 PF00281 Ribosomal protein L5 DKL56_06090 PF00673 ribosomal L5P family C-terminus DKL56_06095 PF00467 KOW motif DKL56_06095 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DKL56_06100 PF00238 Ribosomal protein L14p/L23e DKL56_06105 PF00366 Ribosomal protein S17 DKL56_06110 PF00831 Ribosomal L29 protein DKL56_06115 PF00252 Ribosomal protein L16p/L10e DKL56_06120 PF00189 Ribosomal protein S3, C-terminal domain DKL56_06120 PF07650 KH domain DKL56_06125 PF00237 Ribosomal protein L22p/L17e DKL56_06130 PF00203 Ribosomal protein S19 DKL56_06135 PF03947 Ribosomal Proteins L2, C-terminal domain DKL56_06135 PF00181 Ribosomal Proteins L2, RNA binding domain DKL56_06140 PF00276 Ribosomal protein L23 DKL56_06145 PF00573 Ribosomal protein L4/L1 family DKL56_06150 PF00297 Ribosomal protein L3 DKL56_06155 PF00338 Ribosomal protein S10p/S20e DKL56_06160 PF00679 Elongation factor G C-terminus DKL56_06160 PF00009 Elongation factor Tu GTP binding domain DKL56_06160 PF03144 Elongation factor Tu domain 2 DKL56_06160 PF14492 Elongation Factor G, domain II DKL56_06160 PF03764 Elongation factor G, domain IV DKL56_06165 PF00177 Ribosomal protein S7p/S5e DKL56_06170 PF00164 Ribosomal protein S12/S23 DKL56_06175 PF06750 Bacterial Peptidase A24 N-terminal domain DKL56_06175 PF01478 Type IV leader peptidase family DKL56_06185 PF04998 RNA polymerase Rpb1, domain 5 DKL56_06185 PF05000 RNA polymerase Rpb1, domain 4 DKL56_06185 PF04983 RNA polymerase Rpb1, domain 3 DKL56_06185 PF00623 RNA polymerase Rpb1, domain 2 DKL56_06185 PF04997 RNA polymerase Rpb1, domain 1 DKL56_06190 PF00562 RNA polymerase Rpb2, domain 6 DKL56_06190 PF04565 RNA polymerase Rpb2, domain 3 DKL56_06190 PF04563 RNA polymerase beta subunit DKL56_06190 PF04561 RNA polymerase Rpb2, domain 2 DKL56_06190 PF10385 RNA polymerase beta subunit external 1 domain DKL56_06190 PF04560 RNA polymerase Rpb2, domain 7 DKL56_06195 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_06195 PF02861 Clp amino terminal domain, pathogenicity island component DKL56_06195 PF17871 AAA lid domain DKL56_06195 PF07724 AAA domain (Cdc48 subfamily) DKL56_06195 PF10431 C-terminal, D2-small domain, of ClpB protein DKL56_06225 PF01336 OB-fold nucleic acid binding domain DKL56_06225 PF00152 tRNA synthetases class II (D, K and N) DKL56_06230 PF01207 Dihydrouridine synthase (Dus) DKL56_06235 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_06240 PF01430 Hsp33 protein DKL56_06245 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_06245 PF06480 FtsH Extracellular DKL56_06245 PF01434 Peptidase family M41 DKL56_06245 PF17862 AAA+ lid domain DKL56_06250 PF01171 PP-loop family DKL56_06265 PF01479 S4 domain DKL56_06270 PF00270 DEAD/DEAH box helicase DKL56_06270 PF17757 UvrB interaction domain DKL56_06270 PF00271 Helicase conserved C-terminal domain DKL56_06270 PF02559 CarD-like/TRCF domain DKL56_06270 PF03461 TRCF domain DKL56_06275 PF01195 Peptidyl-tRNA hydrolase DKL56_06285 PF01168 Alanine racemase, N-terminal domain DKL56_06285 PF00842 Alanine racemase, C-terminal domain DKL56_06290 PF01648 4'-phosphopantetheinyl transferase superfamily DKL56_06295 PF00270 DEAD/DEAH box helicase DKL56_06295 PF00271 Helicase conserved C-terminal domain DKL56_06300 PF01225 Mur ligase family, catalytic domain DKL56_06300 PF08245 Mur ligase middle domain DKL56_06300 PF02875 Mur ligase family, glutamate ligase domain DKL56_06305 PF01197 Ribosomal protein L31 DKL56_06315 PF00005 ABC transporter DKL56_06320 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_06325 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_06330 PF00056 lactate/malate dehydrogenase, NAD binding domain DKL56_06330 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DKL56_06335 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DKL56_06335 PF00294 pfkB family carbohydrate kinase DKL56_06340 PF13520 Amino acid permease DKL56_06345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_06350 PF14537 Cytochrome c3 DKL56_06350 PF00890 FAD binding domain DKL56_06370 PF00005 ABC transporter DKL56_06375 PF00232 Glycosyl hydrolase family 1 DKL56_06385 PF02378 Phosphotransferase system, EIIC DKL56_06385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_06385 PF00367 phosphotransferase system, EIIB DKL56_06400 PF03306 Alpha-acetolactate decarboxylase DKL56_06410 PF02540 NAD synthase DKL56_06410 PF00958 GMP synthase C terminal domain DKL56_06410 PF00117 Glutamine amidotransferase class-I DKL56_06415 PF00156 Phosphoribosyl transferase domain DKL56_06420 PF00860 Permease family DKL56_06435 PF03577 Peptidase family C69 DKL56_06440 PF00480 ROK family DKL56_06460 PF03610 PTS system fructose IIA component DKL56_06460 PF03830 PTS system sorbose subfamily IIB component DKL56_06465 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_06475 PF00158 Sigma-54 interaction domain DKL56_06475 PF00874 PRD domain DKL56_06475 PF03610 PTS system fructose IIA component DKL56_06485 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DKL56_06490 PF06418 CTP synthase N-terminus DKL56_06490 PF00117 Glutamine amidotransferase class-I DKL56_06495 PF05066 HB1, ASXL, restriction endonuclease HTH domain DKL56_06515 PF01966 HD domain DKL56_06520 PF03412 Peptidase C39 family DKL56_06520 PF00664 ABC transporter transmembrane region DKL56_06520 PF00005 ABC transporter DKL56_06525 PF00664 ABC transporter transmembrane region DKL56_06525 PF00005 ABC transporter DKL56_06530 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DKL56_06530 PF14572 Phosphoribosyl synthetase-associated domain DKL56_06535 PF01380 SIS domain DKL56_06540 PF02378 Phosphotransferase system, EIIC DKL56_06540 PF00367 phosphotransferase system, EIIB DKL56_06560 PF02378 Phosphotransferase system, EIIC DKL56_06565 PF02378 Phosphotransferase system, EIIC DKL56_06575 PF00356 Bacterial regulatory proteins, lacI family DKL56_06580 PF00480 ROK family DKL56_06585 PF00232 Glycosyl hydrolase family 1 DKL56_06595 PF12804 MobA-like NTP transferase domain DKL56_06595 PF00132 Bacterial transferase hexapeptide (six repeats) DKL56_06600 PF09182 Bacterial purine repressor, N-terminal DKL56_06600 PF00156 Phosphoribosyl transferase domain DKL56_06605 PF06257 Biofilm formation stimulator VEG DKL56_06610 PF00398 Ribosomal RNA adenine dimethylase DKL56_06615 PF13331 Domain of unknown function (DUF4093) DKL56_06615 PF01751 Toprim domain DKL56_06620 PF01026 TatD related DNase DKL56_06625 PF01588 Putative tRNA binding domain DKL56_06625 PF09334 tRNA synthetases class I (M) DKL56_06625 PF08264 Anticodon-binding domain of tRNA DKL56_06630 PF00690 Cation transporter/ATPase, N-terminus DKL56_06630 PF00689 Cation transporting ATPase, C-terminus DKL56_06640 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DKL56_06645 PF00579 tRNA synthetases class I (W and Y) DKL56_06665 PF00817 impB/mucB/samB family DKL56_06665 PF11799 impB/mucB/samB family C-terminal domain DKL56_06665 PF11798 IMS family HHH motif DKL56_06670 PF03449 Transcription elongation factor, N-terminal DKL56_06670 PF01272 Transcription elongation factor, GreA/GreB, C-term DKL56_06675 PF00011 Hsp20/alpha crystallin family DKL56_06680 PF03051 Peptidase C1-like family DKL56_06685 PF01156 Inosine-uridine preferring nucleoside hydrolase DKL56_06710 PF02608 ABC transporter substrate-binding protein PnrA-like DKL56_06715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DKL56_06715 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DKL56_06720 PF01966 HD domain DKL56_06730 PF01906 Putative heavy-metal-binding DKL56_06740 PF00579 tRNA synthetases class I (W and Y) DKL56_06740 PF01479 S4 domain DKL56_06745 PF00884 Sulfatase DKL56_06750 PF02660 Glycerol-3-phosphate acyltransferase DKL56_06755 PF03816 Cell envelope-related transcriptional attenuator domain DKL56_06780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_06785 PF03611 PTS system sugar-specific permease component DKL56_06795 PF00596 Class II Aldolase and Adducin N-terminal domain DKL56_06800 PF01926 50S ribosome-binding GTPase DKL56_06800 PF13167 GTP-binding GTPase N-terminal DKL56_06800 PF16360 GTP-binding GTPase Middle Region DKL56_06805 PF00877 NlpC/P60 family DKL56_06810 PF01476 LysM domain DKL56_06810 PF00877 NlpC/P60 family DKL56_06810 PF08239 Bacterial SH3 domain DKL56_06815 PF00877 NlpC/P60 family DKL56_06820 PF00625 Guanylate kinase DKL56_06830 PF00005 ABC transporter DKL56_06830 PF02687 FtsX-like permease family DKL56_06830 PF12704 MacB-like periplasmic core domain DKL56_06855 PF02661 Fic/DOC family DKL56_06855 PF18543 Intracellular delivery domain DKL56_06870 PF07732 Multicopper oxidase DKL56_06870 PF07731 Multicopper oxidase DKL56_06875 PF13529 Peptidase_C39 like family DKL56_06885 PF06738 Putative threonine/serine exporter DKL56_06890 PF00005 ABC transporter DKL56_06890 PF12848 ABC transporter DKL56_06900 PF03816 Cell envelope-related transcriptional attenuator domain DKL56_06905 PF08439 Oligopeptidase F DKL56_06905 PF01432 Peptidase family M3 DKL56_06910 PF07687 Peptidase dimerisation domain DKL56_06910 PF01546 Peptidase family M20/M25/M40 DKL56_06915 PF00005 ABC transporter DKL56_06920 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_06925 PF01070 FMN-dependent dehydrogenase DKL56_06930 PF00950 ABC 3 transport family DKL56_06935 PF00005 ABC transporter DKL56_06940 PF01510 N-acetylmuramoyl-L-alanine amidase DKL56_06940 PF13457 GW (Gly-Tryp) dipeptide domain DKL56_06945 PF01297 Zinc-uptake complex component A periplasmic DKL56_06950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DKL56_06950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DKL56_06955 PF00294 pfkB family carbohydrate kinase DKL56_06960 PF08220 DeoR-like helix-turn-helix domain DKL56_06960 PF00455 DeoR C terminal sensor domain DKL56_06965 PF07690 Major Facilitator Superfamily DKL56_06980 PF00962 Adenosine/AMP deaminase DKL56_06985 PF14537 Cytochrome c3 DKL56_06985 PF00890 FAD binding domain DKL56_06990 PF00890 FAD binding domain DKL56_06990 PF04205 FMN-binding domain DKL56_07000 PF00890 FAD binding domain DKL56_07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_07005 PF03466 LysR substrate binding domain DKL56_07010 PF04205 FMN-binding domain DKL56_07010 PF03358 NADPH-dependent FMN reductase DKL56_07010 PF00890 FAD binding domain DKL56_07015 PF00710 Asparaginase, N-terminal DKL56_07015 PF17763 Glutaminase/Asparaginase C-terminal domain DKL56_07020 PF02627 Carboxymuconolactone decarboxylase family DKL56_07030 PF13411 MerR HTH family regulatory protein DKL56_07035 PF08359 YsiA-like protein, C-terminal region DKL56_07035 PF00440 Bacterial regulatory proteins, tetR family DKL56_07040 PF00009 Elongation factor Tu GTP binding domain DKL56_07040 PF06421 GTP-binding protein LepA C-terminus DKL56_07040 PF00679 Elongation factor G C-terminus DKL56_07045 PF00300 Histidine phosphatase superfamily (branch 1) DKL56_07060 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DKL56_07060 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DKL56_07065 PF02080 TrkA-C domain DKL56_07065 PF00999 Sodium/hydrogen exchanger family DKL56_07065 PF02254 TrkA-N domain DKL56_07075 PF13457 GW (Gly-Tryp) dipeptide domain DKL56_07075 PF01510 N-acetylmuramoyl-L-alanine amidase DKL56_07080 PF01476 LysM domain DKL56_07080 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DKL56_07100 PF03217 Surface later protein A domain DKL56_07125 PF02705 K+ potassium transporter DKL56_07130 PF10502 Signal peptidase, peptidase S26 DKL56_07135 PF05649 Peptidase family M13 DKL56_07135 PF01431 Peptidase family M13 DKL56_07140 PF07690 Major Facilitator Superfamily DKL56_07150 PF00733 Asparagine synthase DKL56_07150 PF13537 Glutamine amidotransferase domain DKL56_07165 PF03352 Methyladenine glycosylase DKL56_07170 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_07175 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_07180 PF00005 ABC transporter DKL56_07195 PF00582 Universal stress protein family DKL56_07200 PF13350 Tyrosine phosphatase family DKL56_07205 PF05014 Nucleoside 2-deoxyribosyltransferase DKL56_07210 PF00958 GMP synthase C terminal domain DKL56_07210 PF02540 NAD synthase DKL56_07210 PF00117 Glutamine amidotransferase class-I DKL56_07215 PF01979 Amidohydrolase family DKL56_07220 PF13802 Galactose mutarotase-like DKL56_07220 PF01055 Glycosyl hydrolases family 31 DKL56_07220 PF17137 Domain of unknown function (DUF5110) DKL56_07220 PF16338 Domain of unknown function (DUF4968) DKL56_07230 PF07690 Major Facilitator Superfamily DKL56_07245 PF00232 Glycosyl hydrolase family 1 DKL56_07250 PF00232 Glycosyl hydrolase family 1 DKL56_07255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DKL56_07255 PF00367 phosphotransferase system, EIIB DKL56_07255 PF02378 Phosphotransferase system, EIIC DKL56_07260 PF00874 PRD domain DKL56_07260 PF03123 CAT RNA binding domain DKL56_07275 PF06458 MucBP domain DKL56_07280 PF06458 MucBP domain DKL56_07290 PF06458 MucBP domain DKL56_07300 PF03576 Peptidase family S58 DKL56_07325 PF13855 Leucine rich repeat DKL56_07325 PF06458 MucBP domain DKL56_07325 PF12799 Leucine Rich repeats (2 copies) DKL56_07325 PF08191 LRR adjacent DKL56_07330 PF06458 MucBP domain DKL56_07335 PF01661 Macro domain DKL56_07340 PF13350 Tyrosine phosphatase family DKL56_07345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DKL56_07345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DKL56_07350 PF08543 Phosphomethylpyrimidine kinase DKL56_07355 PF07685 CobB/CobQ-like glutamine amidotransferase domain DKL56_07360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DKL56_07360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DKL56_07365 PF03466 LysR substrate binding domain DKL56_07365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_07385 PF00206 Lyase DKL56_07385 PF10397 Adenylosuccinate lyase C-terminus DKL56_07390 PF00709 Adenylosuccinate synthetase DKL56_07395 PF00478 IMP dehydrogenase / GMP reductase domain DKL56_07410 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_07415 PF03609 PTS system sorbose-specific iic component DKL56_07420 PF03830 PTS system sorbose subfamily IIB component DKL56_07420 PF03610 PTS system fructose IIA component DKL56_07425 PF00158 Sigma-54 interaction domain DKL56_07425 PF00874 PRD domain DKL56_07425 PF03610 PTS system fructose IIA component DKL56_07430 PF03466 LysR substrate binding domain DKL56_07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_07435 PF00890 FAD binding domain DKL56_07435 PF14537 Cytochrome c3 DKL56_07445 PF00890 FAD binding domain DKL56_07445 PF03358 NADPH-dependent FMN reductase DKL56_07445 PF04205 FMN-binding domain DKL56_07455 PF03466 LysR substrate binding domain DKL56_07455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DKL56_07460 PF13382 Adenine deaminase C-terminal domain DKL56_07460 PF01979 Amidohydrolase family DKL56_07470 PF00005 ABC transporter DKL56_07470 PF08402 TOBE domain DKL56_07485 PF01118 Semialdehyde dehydrogenase, NAD binding domain DKL56_07485 PF02774 Semialdehyde dehydrogenase, dimerisation domain DKL56_07490 PF00155 Aminotransferase class I and II DKL56_07495 PF01113 Dihydrodipicolinate reductase, N-terminus DKL56_07495 PF05173 Dihydrodipicolinate reductase, C-terminus DKL56_07500 PF00701 Dihydrodipicolinate synthetase family DKL56_07505 PF01546 Peptidase family M20/M25/M40 DKL56_07505 PF07687 Peptidase dimerisation domain DKL56_07510 PF00132 Bacterial transferase hexapeptide (six repeats) DKL56_07510 PF14602 Hexapeptide repeat of succinyl-transferase DKL56_07510 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DKL56_07515 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DKL56_07515 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DKL56_07520 PF13840 ACT domain DKL56_07520 PF00696 Amino acid kinase family DKL56_07525 PF01678 Diaminopimelate epimerase DKL56_07530 PF07859 alpha/beta hydrolase fold DKL56_07535 PF06445 GyrI-like small molecule binding domain DKL56_07535 PF12833 Helix-turn-helix domain DKL56_07545 PF13520 Amino acid permease DKL56_07550 PF07722 Peptidase C26 DKL56_07575 PF13411 MerR HTH family regulatory protein DKL56_07580 PF13823 Alcohol dehydrogenase GroES-associated DKL56_07580 PF08240 Alcohol dehydrogenase GroES-like domain DKL56_07580 PF00107 Zinc-binding dehydrogenase DKL56_07590 PF00155 Aminotransferase class I and II DKL56_07605 PF03123 CAT RNA binding domain DKL56_07605 PF00874 PRD domain DKL56_07615 PF03613 PTS system mannose/fructose/sorbose family IID component DKL56_07625 PF03610 PTS system fructose IIA component DKL56_07625 PF03830 PTS system sorbose subfamily IIB component DKL56_07630 PF07859 alpha/beta hydrolase fold DKL56_07635 PF01925 Sulfite exporter TauE/SafE DKL56_07645 PF01063 Amino-transferase class IV DKL56_07650 PF07724 AAA domain (Cdc48 subfamily) DKL56_07650 PF17871 AAA lid domain DKL56_07650 PF10431 C-terminal, D2-small domain, of ClpB protein DKL56_07650 PF00004 ATPase family associated with various cellular activities (AAA) DKL56_07655 PF17760 UvrA interaction domain DKL56_07655 PF17755 UvrA DNA-binding domain DKL56_07655 PF00005 ABC transporter DKL56_07685 PF00144 Beta-lactamase DKL56_07690 PF04914 DltD protein DKL56_07695 PF00550 Phosphopantetheine attachment site DKL56_07700 PF03062 MBOAT, membrane-bound O-acyltransferase family DKL56_07705 PF13193 AMP-binding enzyme C-terminal domain DKL56_07705 PF00501 AMP-binding enzyme DKL56_07745 PF00005 ABC transporter DKL56_07745 PF02687 FtsX-like permease family DKL56_07745 PF12704 MacB-like periplasmic core domain DKL56_07745 PF00005 ABC transporter DKL56_07745 PF02687 FtsX-like permease family DKL56_07745 PF12704 MacB-like periplasmic core domain DKL56_07750 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DKL56_07765 PF03780 Asp23 family, cell envelope-related function DKL56_07770 PF01712 Deoxynucleoside kinase DKL56_07775 PF01712 Deoxynucleoside kinase DKL56_07780 PF00528 Binding-protein-dependent transport system inner membrane component DKL56_07785 PF00005 ABC transporter DKL56_07790 PF00497 Bacterial extracellular solute-binding proteins, family 3 DKL56_07800 PF00860 Permease family DKL56_07805 PF00939 Sodium:sulfate symporter transmembrane region DKL56_07810 PF00860 Permease family DKL56_07815 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DKL56_07815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DKL56_07820 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DKL56_07820 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DKL56_07820 PF00205 Thiamine pyrophosphate enzyme, central domain DKL56_07825 PF01134 Glucose inhibited division protein A DKL56_07825 PF13932 GidA associated domain DKL56_07830 PF01926 50S ribosome-binding GTPase DKL56_07830 PF12631 MnmE helical domain DKL56_07830 PF10396 GTP-binding protein TrmE N-terminus DKL56_07835 PF02096 60Kd inner membrane protein DKL56_07840 PF00825 Ribonuclease P DKL56_07845 PF00468 Ribosomal protein L34