DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 Gene3D G3DSA:3.40.718.10 1 332 3.6E-120 T 14-10-2018 DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 328 1.7E-104 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 332 126.692 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 PIRSF PIRSF002465 1 332 9.9E-116 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 Pfam PF02504 Fatty acid synthesis protein 3 322 1.1E-96 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DKL56_04710 e71229f08aa6e33cba2a0d4b8c9a4b3f 332 SUPERFAMILY SSF53659 1 329 4.52E-92 T 14-10-2018 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 Gene3D G3DSA:3.30.360.10 120 222 7.0E-70 T 14-10-2018 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 118 3.5E-29 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 253 27.258 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 140 157 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 122 252 1.2E-29 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 PIRSF PIRSF000161 1 254 1.2E-67 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 252 3.5E-62 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 Gene3D G3DSA:3.40.50.720 3 240 7.0E-70 T 14-10-2018 DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 SUPERFAMILY SSF51735 2 145 4.46E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07495 92ce4b91fc86c5a4e9231c98e8f2ec0e 254 SUPERFAMILY SSF55347 120 224 7.41E-36 T 14-10-2018 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 8.5E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 8.5E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 8.5E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 72 14.009 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 Pfam PF00137 ATP synthase subunit C 8 71 3.7E-14 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 17 73 2.2E-23 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 SUPERFAMILY SSF81333 3 73 8.76E-20 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DKL56_03200 bdf45633c6b79a02bd617e40538cac56 74 Gene3D G3DSA:1.20.20.10 5 73 6.6E-25 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 439 456 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 SUPERFAMILY SSF51261 524 676 8.72E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 593 605 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 SUPERFAMILY SSF55604 428 499 1.44E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 Pfam PF02378 Phosphotransferase system, EIIC 10 331 2.4E-81 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 Gene3D G3DSA:3.30.1360.60 423 502 1.9E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 Pfam PF00367 phosphotransferase system, EIIB 429 461 2.2E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 Gene3D G3DSA:2.70.70.10 518 680 7.9E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 403 485 1.7E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 531 653 1.6E-45 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_02310 bc72c5aad69f5c54108ba17097d32fb2 681 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 532 651 5.0E-41 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 531 1.1E-33 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 7 567 1.7E-220 T 14-10-2018 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 421 440 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Gene3D G3DSA:3.40.50.970 352 538 9.9E-42 T 14-10-2018 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.4E-42 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Gene3D G3DSA:3.40.50.970 1 182 2.0E-53 T 14-10-2018 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 SUPERFAMILY SSF52518 362 541 1.03E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Gene3D G3DSA:3.40.50.1220 187 350 4.3E-38 T 14-10-2018 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 323 1.4E-26 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 SUPERFAMILY SSF52467 187 353 6.75E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKL56_07820 325748036674d2a87d3f9cd980fccd08 603 SUPERFAMILY SSF52518 1 175 1.36E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_00625 25fcf4c90330640bae37219da22e43af 337 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 20 330 1.2E-99 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DKL56_00625 25fcf4c90330640bae37219da22e43af 337 PIRSF PIRSF001555 7 337 6.6E-153 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DKL56_00625 25fcf4c90330640bae37219da22e43af 337 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 11 333 50.018 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DKL56_00625 25fcf4c90330640bae37219da22e43af 337 SUPERFAMILY SSF55681 15 330 5.64E-88 T 14-10-2018 DKL56_00625 25fcf4c90330640bae37219da22e43af 337 Gene3D G3DSA:3.30.930.10 13 333 1.3E-140 T 14-10-2018 DKL56_00625 25fcf4c90330640bae37219da22e43af 337 Pfam PF03590 Aspartate-ammonia ligase 20 246 1.4E-102 T 14-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 ProSitePatterns PS01229 Hypothetical cof family signature 2. 214 236 - T 14-10-2018 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 Gene3D G3DSA:3.40.50.1000 5 260 3.0E-62 T 14-10-2018 IPR023214 HAD superfamily DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 1.4E-50 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 Gene3D G3DSA:3.30.1240.10 82 189 3.0E-62 T 14-10-2018 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 233 2.0E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 6.6E-55 T 14-10-2018 DKL56_07795 4fe66c5f0af9d74f9629fcbc47e49adb 264 SUPERFAMILY SSF56784 1 263 1.39E-58 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02500 27fb313dffd446412eaab1f65e55b522 268 Gene3D G3DSA:3.40.50.10330 26 261 2.8E-93 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DKL56_02500 27fb313dffd446412eaab1f65e55b522 268 Pfam PF01513 ATP-NAD kinase 35 242 4.8E-30 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DKL56_02500 27fb313dffd446412eaab1f65e55b522 268 Hamap MF_00361 NAD kinase [nadK]. 1 262 25.779 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DKL56_02500 27fb313dffd446412eaab1f65e55b522 268 SUPERFAMILY SSF111331 6 260 6.41E-65 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DKL56_02500 27fb313dffd446412eaab1f65e55b522 268 Gene3D G3DSA:2.60.200.30 103 239 2.8E-93 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 SMART SM00849 20 217 1.4E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Gene3D G3DSA:3.40.50.10710 209 359 8.0E-180 T 14-10-2018 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Gene3D G3DSA:3.10.20.580 451 557 1.9E-33 T 14-10-2018 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 366 394 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 555 2.0E-199 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 SUPERFAMILY SSF56281 10 424 5.42E-88 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Hamap MF_01491 Ribonuclease J [rnj]. 3 558 44.325 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Gene3D G3DSA:3.60.15.10 11 444 8.0E-180 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 PIRSF PIRSF004803 2 558 3.0E-221 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 408 1.9E-12 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DKL56_03500 6d415f95cd7334392351d2ec9f30ed4c 559 Pfam PF00753 Metallo-beta-lactamase superfamily 21 170 3.0E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 Gene3D G3DSA:3.40.50.300 6 335 9.0E-87 T 14-10-2018 DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 SMART SM00382 37 236 2.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 Pfam PF00005 ABC transporter 29 186 1.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 295 4.2E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 SUPERFAMILY SSF52540 8 258 5.32E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04700 f28df1fe37f69d39798f2e904fa38de8 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 3.0E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_02815 085a5f87eec3708bd2c87a4260da94d7 177 SUPERFAMILY SSF53098 1 173 3.21E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_02815 085a5f87eec3708bd2c87a4260da94d7 177 SMART SM00479 2 167 1.1E-20 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_02815 085a5f87eec3708bd2c87a4260da94d7 177 Pfam PF00929 Exonuclease 4 157 1.7E-19 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_02815 085a5f87eec3708bd2c87a4260da94d7 177 Gene3D G3DSA:3.30.420.10 1 166 1.3E-36 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_02815 085a5f87eec3708bd2c87a4260da94d7 177 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 21 159 5.7E-21 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_00225 64cfaae61b3a6291c54e3ef055d23203 301 SUPERFAMILY SSF103481 203 295 1.44E-6 T 14-10-2018 DKL56_00225 64cfaae61b3a6291c54e3ef055d23203 301 Pfam PF00892 EamA-like transporter family 176 297 1.4E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DKL56_01160 3e8ea667ab3d009412200211433583ab 500 Gene3D G3DSA:3.90.700.10 250 433 2.3E-96 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_01160 3e8ea667ab3d009412200211433583ab 500 Gene3D G3DSA:3.50.50.60 6 497 2.3E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_01160 3e8ea667ab3d009412200211433583ab 500 SUPERFAMILY SSF56425 282 429 1.65E-24 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_01160 3e8ea667ab3d009412200211433583ab 500 Pfam PF00890 FAD binding domain 7 476 1.4E-43 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_01160 3e8ea667ab3d009412200211433583ab 500 SUPERFAMILY SSF51905 4 500 5.5E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 SUPERFAMILY SSF53271 10 166 1.53E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 Gene3D G3DSA:3.40.50.2020 156 298 1.0E-102 T 14-10-2018 DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 129 9.3E-43 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 319 2.7E-96 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 SMART SM01400 13 129 3.3E-63 T 14-10-2018 DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 SUPERFAMILY SSF53271 115 312 8.21E-40 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 Pfam PF14572 Phosphoribosyl synthetase-associated domain 217 320 1.1E-20 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_00665 3d88de2692a8071f6a0beb2f07074657 326 Gene3D G3DSA:3.40.50.2020 19 309 1.0E-102 T 14-10-2018 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Gene3D G3DSA:3.10.20.30 48 364 2.6E-146 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DKL56_00935 129783204487a4ef33cc414ce3c73784 366 SUPERFAMILY SSF81271 282 366 8.72E-34 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 SUPERFAMILY SSF52540 3 304 1.02E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Gene3D G3DSA:1.10.150.300 113 200 2.6E-146 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Gene3D G3DSA:3.40.50.300 4 281 2.6E-146 T 14-10-2018 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Pfam PF01926 50S ribosome-binding GTPase 5 128 3.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 6.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 6.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 6.2E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 5.9E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 6.8E-147 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 PIRSF PIRSF006641 1 366 1.4E-153 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DKL56_00935 129783204487a4ef33cc414ce3c73784 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 42.934 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 SUPERFAMILY SSF52021 2 142 3.01E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 2 129 8.3E-49 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 355 44.577 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 SUPERFAMILY SSF52317 150 354 2.93E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 Gene3D G3DSA:3.50.30.20 1 148 4.6E-54 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 Pfam PF00117 Glutamine amidotransferase class-I 172 349 5.9E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 SMART SM01097 1 130 9.0E-76 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 3 352 1.4E-144 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 240 251 6.8E-12 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 326 339 6.8E-12 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 213 222 6.8E-12 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00097 Anthranilate synthase component II signature 326 339 1.5E-7 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00097 Anthranilate synthase component II signature 240 251 1.5E-7 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00097 Anthranilate synthase component II signature 213 222 1.5E-7 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 Gene3D G3DSA:3.40.50.880 164 361 2.5E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 171 185 3.7E-37 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 210 224 3.7E-37 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 3.7E-37 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 282 293 3.7E-37 T 14-10-2018 DKL56_04910 d2d941e612ef9b49671f695183dd384f 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 3.7E-37 T 14-10-2018 DKL56_02570 23f2aba46b17b4a1dbbca995043c2c0a 311 Gene3D G3DSA:3.40.190.120 142 246 8.5E-76 T 14-10-2018 DKL56_02570 23f2aba46b17b4a1dbbca995043c2c0a 311 SUPERFAMILY SSF53850 37 306 1.3E-56 T 14-10-2018 DKL56_02570 23f2aba46b17b4a1dbbca995043c2c0a 311 Gene3D G3DSA:3.40.190.10 43 301 8.5E-76 T 14-10-2018 DKL56_02570 23f2aba46b17b4a1dbbca995043c2c0a 311 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 37 301 4.5E-46 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 SUPERFAMILY SSF64288 56 235 4.87E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 SUPERFAMILY SSF46785 5 72 1.56E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 2.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 Pfam PF07702 UTRA domain 92 228 6.7E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 235 8.2E-83 T 14-10-2018 IPR012770 Trehalose operon transcriptional repressor DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 SMART SM00866 90 228 2.3E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 Gene3D G3DSA:1.10.10.10 2 69 1.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 Gene3D G3DSA:3.40.1410.10 76 231 6.6E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_00200 ab38c1e4343d35d27b02724885c323aa 244 SMART SM00345 9 68 1.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01285 c6bc6eb96e8c062864cb349d5b5fb662 456 Gene3D G3DSA:1.20.1740.10 12 455 3.8E-49 T 14-10-2018 DKL56_01285 c6bc6eb96e8c062864cb349d5b5fb662 456 Pfam PF00324 Amino acid permease 20 449 1.2E-84 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DKL56_01285 c6bc6eb96e8c062864cb349d5b5fb662 456 ProSitePatterns PS00218 Amino acid permeases signature. 45 75 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 DKL56_01285 c6bc6eb96e8c062864cb349d5b5fb662 456 PIRSF PIRSF006060 1 454 9.3E-56 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_01115 beda38c1ecdfc78b86a2160782b9daeb 295 Gene3D G3DSA:3.40.570.10 61 281 5.8E-66 T 14-10-2018 DKL56_01115 beda38c1ecdfc78b86a2160782b9daeb 295 Pfam PF13930 DNA/RNA non-specific endonuclease 110 252 1.9E-15 T 14-10-2018 DKL56_01115 beda38c1ecdfc78b86a2160782b9daeb 295 SMART SM00892 95 280 4.4E-5 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 SUPERFAMILY SSF50249 67 131 5.57E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 4.7E-26 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 SMART SM01185 69 123 9.9E-28 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 8.3E-24 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Gene3D G3DSA:2.40.50.140 130 187 5.8E-24 T 14-10-2018 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Gene3D G3DSA:2.40.50.140 66 129 6.8E-27 T 14-10-2018 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 8.1E-80 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 122 1.6E-24 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 SUPERFAMILY SSF50249 130 187 7.42E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 49.471 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 Gene3D G3DSA:2.30.30.30 3 64 1.9E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 SUPERFAMILY SSF50104 3 65 3.19E-21 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 SMART SM00841 131 186 1.7E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DKL56_04835 c26ae5b6f348813c78493cac1c2e2b6f 189 PIRSF PIRSF005901 2 188 1.4E-70 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Pfam PF00158 Sigma-54 interaction domain 105 267 2.5E-45 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Pfam PF03610 PTS system fructose IIA component 559 624 6.8E-5 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 SUPERFAMILY SSF52540 113 343 4.4E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06475 8ee2b38544294281c15358bf13996b75 911 SUPERFAMILY SSF63520 813 909 1.11E-11 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Gene3D G3DSA:3.40.50.300 88 278 3.9E-39 T 14-10-2018 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 198 213 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Pfam PF00874 PRD domain 822 905 8.3E-12 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 129 142 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Gene3D G3DSA:3.40.50.510 554 681 1.5E-29 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 SMART SM00382 125 275 3.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06475 8ee2b38544294281c15358bf13996b75 911 SUPERFAMILY SSF53062 556 676 4.45E-11 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_06475 8ee2b38544294281c15358bf13996b75 911 Gene3D G3DSA:1.10.1790.10 813 910 1.5E-8 T 14-10-2018 DKL56_04215 fc06f0b29e4895f5f8e180db19799c82 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 33.403 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DKL56_04215 fc06f0b29e4895f5f8e180db19799c82 145 Gene3D G3DSA:3.50.80.10 1 145 4.7E-56 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DKL56_04215 fc06f0b29e4895f5f8e180db19799c82 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 1.3E-53 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DKL56_04215 fc06f0b29e4895f5f8e180db19799c82 145 SUPERFAMILY SSF69500 1 144 5.36E-54 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DKL56_04215 fc06f0b29e4895f5f8e180db19799c82 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 5.2E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 Gene3D G3DSA:3.40.50.300 1 215 2.3E-73 T 14-10-2018 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 Pfam PF00406 Adenylate kinase 6 192 1.9E-53 T 14-10-2018 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 PRINTS PR00094 Adenylate kinase signature 33 47 6.3E-28 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 PRINTS PR00094 Adenylate kinase signature 82 98 6.3E-28 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 PRINTS PR00094 Adenylate kinase signature 162 177 6.3E-28 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 PRINTS PR00094 Adenylate kinase signature 179 193 6.3E-28 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 PRINTS PR00094 Adenylate kinase signature 5 18 6.3E-28 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 Hamap MF_00235 Adenylate kinase [adk]. 2 215 47.683 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 SUPERFAMILY SSF52540 1 215 1.84E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 Pfam PF05191 Adenylate kinase, active site lid 128 164 2.0E-13 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DKL56_06045 72a697ef99a463f36587a6885f07b3b3 216 TIGRFAM TIGR01351 adk: adenylate kinase 4 214 2.3E-76 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 SUPERFAMILY SSF56024 266 472 5.16E-43 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Hamap MF_01916 Cardiolipin synthase. 8 485 40.376 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 PIRSF PIRSF000850 100 278 0.039 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 PIRSF PIRSF000850 305 382 0.22 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 PIRSF PIRSF000850 373 475 0.081 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Pfam PF13091 PLD-like domain 132 261 2.3E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Pfam PF13091 PLD-like domain 325 452 6.4E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Pfam PF13396 Phospholipase_D-nuclease N-terminal 15 56 3.9E-10 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 SUPERFAMILY SSF56024 102 317 9.2E-50 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 SMART SM00155 214 241 0.011 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 SMART SM00155 398 425 0.0012 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Gene3D G3DSA:3.30.870.10 295 484 2.2E-31 T 14-10-2018 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 3 485 2.4E-139 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DKL56_00635 71e901ea870b6dddb3feeb6b7f1bb413 485 Gene3D G3DSA:3.30.870.10 110 291 5.5E-37 T 14-10-2018 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 SMART SM00382 369 556 7.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 Gene3D G3DSA:3.40.50.300 343 583 1.4E-86 T 14-10-2018 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 Pfam PF00005 ABC transporter 360 510 1.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 Pfam PF00664 ABC transporter transmembrane region 34 295 1.4E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 SUPERFAMILY SSF90123 21 329 1.12E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 SUPERFAMILY SSF52540 340 581 1.03E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02155 55f6d2192e2a2265de3615a44d72631e 583 Gene3D G3DSA:1.20.1560.10 2 331 1.3E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Gene3D G3DSA:3.40.1360.10 77 199 1.2E-45 T 14-10-2018 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 SUPERFAMILY SSF111304 2 199 2.22E-73 T 14-10-2018 IPR023627 Recombination protein RecR DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Gene3D G3DSA:3.30.60.80 54 76 9.4E-6 T 14-10-2018 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.98 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 SMART SM00493 80 166 1.1E-14 T 14-10-2018 IPR006171 TOPRIM domain DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Pfam PF13662 Toprim domain 80 172 1.6E-26 T 14-10-2018 IPR006171 TOPRIM domain DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 2.4E-77 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Gene3D G3DSA:1.10.8.420 1 53 1.4E-18 T 14-10-2018 DKL56_05595 e3b3657c8219f4f011e6baf31a99f67f 199 Pfam PF02132 RecR protein 39 77 5.0E-17 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 Gene3D G3DSA:1.10.8.60 8 236 1.7E-106 T 14-10-2018 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 Pfam PF13177 DNA polymerase III, delta subunit 20 178 3.5E-46 T 14-10-2018 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 SUPERFAMILY SSF48019 249 353 8.67E-6 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 235 321 1.6E-5 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 SUPERFAMILY SSF52540 33 222 3.0E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 Gene3D G3DSA:3.40.50.300 13 177 1.7E-106 T 14-10-2018 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 6.8E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 6.8E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 SMART SM00382 37 179 7.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05605 833f9626887271a10e2ca6189ffdaf9b 607 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 353 3.1E-141 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DKL56_02345 544ba67b8eac9a512c9f99571a326a79 301 Gene3D G3DSA:2.120.10.30 35 184 8.2E-31 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DKL56_02345 544ba67b8eac9a512c9f99571a326a79 301 Gene3D G3DSA:2.120.10.30 185 301 1.1E-12 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DKL56_02345 544ba67b8eac9a512c9f99571a326a79 301 SUPERFAMILY SSF101898 69 300 7.06E-42 T 14-10-2018 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 7 276 9.2E-78 T 14-10-2018 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 Gene3D G3DSA:3.30.70.890 171 279 6.2E-72 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 SUPERFAMILY SSF54211 5 184 5.54E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 PRINTS PR00959 Mevalonate kinase family signature 261 278 2.1E-17 T 14-10-2018 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 PRINTS PR00959 Mevalonate kinase family signature 89 111 2.1E-17 T 14-10-2018 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 PRINTS PR00959 Mevalonate kinase family signature 7 31 2.1E-17 T 14-10-2018 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 SUPERFAMILY SSF55060 168 292 2.7E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 Pfam PF00288 GHMP kinases N terminal domain 84 146 5.0E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 Gene3D G3DSA:3.30.230.10 7 170 6.2E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_04010 3a82912fea328f7b47b58e008f6655b7 302 Pfam PF08544 GHMP kinases C terminal 220 288 2.3E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DKL56_05005 ced9f34e00561dea000d798f86233527 805 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 799 43.186 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:3.30.930.10 495 699 9.4E-45 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SUPERFAMILY SSF54991 709 805 7.85E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SMART SM00874 410 478 1.5E-25 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Pfam PF03147 Ferredoxin-fold anticodon binding domain 712 805 4.4E-28 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SUPERFAMILY SSF50249 38 198 1.47E-36 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:3.50.40.10 201 408 4.5E-72 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SUPERFAMILY SSF56037 216 402 7.59E-66 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SUPERFAMILY SSF55681 474 698 6.96E-42 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Pfam PF03484 tRNA synthetase B5 domain 414 478 4.2E-19 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:3.30.56.10 4 189 2.0E-58 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Pfam PF03483 B3/4 domain 221 390 6.7E-61 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 805 4.1E-241 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:3.30.56.10 410 481 6.2E-24 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:2.40.50.140 39 166 2.0E-58 T 14-10-2018 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Gene3D G3DSA:3.30.70.380 713 805 1.9E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SUPERFAMILY SSF46955 411 482 5.49E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_05005 ced9f34e00561dea000d798f86233527 805 SMART SM00896 712 805 9.2E-39 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DKL56_05005 ced9f34e00561dea000d798f86233527 805 Pfam PF01588 Putative tRNA binding domain 45 146 1.3E-17 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DKL56_05005 ced9f34e00561dea000d798f86233527 805 SMART SM00873 220 393 1.0E-79 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DKL56_07185 6cc70be353bc3ec3ff4b56b0929a420f 311 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 269 2.2E-71 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DKL56_07185 6cc70be353bc3ec3ff4b56b0929a420f 311 Gene3D G3DSA:3.40.190.10 45 277 3.6E-68 T 14-10-2018 DKL56_07185 6cc70be353bc3ec3ff4b56b0929a420f 311 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 45 296 1.3E-66 T 14-10-2018 DKL56_07185 6cc70be353bc3ec3ff4b56b0929a420f 311 SUPERFAMILY SSF53850 58 306 2.44E-48 T 14-10-2018 DKL56_07185 6cc70be353bc3ec3ff4b56b0929a420f 311 Gene3D G3DSA:3.40.190.10 127 244 3.6E-68 T 14-10-2018 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 4 146 2.7E-39 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 1.0E-14 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00102 Ornithine carbamoyltransferase signature 292 303 1.0E-14 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00102 Ornithine carbamoyltransferase signature 122 136 1.0E-14 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00102 Ornithine carbamoyltransferase signature 82 95 1.0E-14 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00102 Ornithine carbamoyltransferase signature 47 61 1.0E-14 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 4 313 9.0E-94 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 Gene3D G3DSA:3.40.50.1370 136 300 1.2E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 1.3E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 1.3E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 1.3E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 133 144 1.3E-22 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 SUPERFAMILY SSF53671 2 314 5.5E-77 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 311 1.5E-43 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DKL56_02725 64e0ed4b925a2e6851ea3eb4d7d106f0 342 Gene3D G3DSA:3.40.50.1370 11 308 1.2E-99 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_01520 6a8b1c5c13ab70053c1f81c1ec1c65f0 393 Pfam PF00155 Aminotransferase class I and II 32 384 1.5E-63 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DKL56_01520 6a8b1c5c13ab70053c1f81c1ec1c65f0 393 SUPERFAMILY SSF53383 10 391 4.4E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_01520 6a8b1c5c13ab70053c1f81c1ec1c65f0 393 Gene3D G3DSA:3.90.1150.10 31 384 6.4E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_01520 6a8b1c5c13ab70053c1f81c1ec1c65f0 393 Gene3D G3DSA:3.40.640.10 61 286 6.4E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_01520 6a8b1c5c13ab70053c1f81c1ec1c65f0 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DKL56_04425 4f313d46185483c73962682487cfd1b6 175 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 6 172 3.4E-66 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DKL56_04425 4f313d46185483c73962682487cfd1b6 175 Pfam PF00156 Phosphoribosyl transferase domain 36 169 5.1E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_04425 4f313d46185483c73962682487cfd1b6 175 Gene3D G3DSA:3.40.50.2020 2 175 1.6E-60 T 14-10-2018 DKL56_04425 4f313d46185483c73962682487cfd1b6 175 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 5 172 36.345 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DKL56_04425 4f313d46185483c73962682487cfd1b6 175 SUPERFAMILY SSF53271 4 166 8.52E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 136 239 3.9E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 SUPERFAMILY SSF52540 93 344 2.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Gene3D G3DSA:1.10.8.60 274 361 3.7E-29 T 14-10-2018 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Pfam PF07724 AAA domain (Cdc48 subfamily) 458 623 1.2E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 630 705 2.2E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 226 238 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Gene3D G3DSA:3.40.50.300 390 628 9.2E-88 T 14-10-2018 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Pfam PF02151 UvrB/uvrC motif 346 378 2.8E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 493 511 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 SMART SM01086 630 717 1.6E-29 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 SMART SM00382 131 273 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 SMART SM00382 459 631 8.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Gene3D G3DSA:1.10.8.60 630 731 1.2E-24 T 14-10-2018 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 537 555 5.8E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 570 584 5.8E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 508 526 5.8E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 463 481 5.8E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 Gene3D G3DSA:3.40.50.300 86 273 5.1E-67 T 14-10-2018 DKL56_02450 663c5cd3767d61ccd8e7ec60f9610b59 731 SUPERFAMILY SSF52540 408 699 5.6E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01040 17270b0040f4477cc3a0985330625be6 420 Gene3D G3DSA:1.10.10.60 360 418 4.3E-19 T 14-10-2018 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 Pfam PF04963 Sigma-54 factor, core binding domain 72 250 6.2E-39 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 Gene3D G3DSA:1.10.10.1330 73 183 1.2E-19 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PIRSF PIRSF000774 56 420 7.3E-86 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PIRSF PIRSF000774 5 72 6.6E-5 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 17 53 1.2E-6 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 Pfam PF04552 Sigma-54, DNA binding domain 264 419 1.0E-42 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PRINTS PR00045 Sigma-54 factor signature 394 412 5.9E-16 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PRINTS PR00045 Sigma-54 factor signature 139 156 5.9E-16 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PRINTS PR00045 Sigma-54 factor signature 324 336 5.9E-16 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 PRINTS PR00045 Sigma-54 factor signature 340 351 5.9E-16 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_01040 17270b0040f4477cc3a0985330625be6 420 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 17 418 1.2E-93 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Gene3D G3DSA:3.40.50.300 409 583 0.0 T 14-10-2018 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SUPERFAMILY SSF52540 408 577 3.45E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 508 2.5E-236 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Gene3D G3DSA:1.10.3060.10 584 789 0.0 T 14-10-2018 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SUPERFAMILY SSF52540 5 407 2.66E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Gene3D G3DSA:3.90.1440.10 227 360 0.0 T 14-10-2018 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Pfam PF01043 SecA preprotein cross-linking domain 233 350 4.0E-36 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SMART SM00958 226 350 1.9E-63 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SUPERFAMILY SSF81886 585 797 6.54E-67 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Pfam PF07516 SecA Wing and Scaffold domain 582 791 5.3E-59 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Gene3D G3DSA:3.40.50.300 14 408 0.0 T 14-10-2018 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SUPERFAMILY SSF81767 225 360 2.35E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 ProSitePatterns PS01312 SecA family signature. 492 507 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Pfam PF07517 SecA DEAD-like domain 7 394 4.6E-127 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 115 125 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 331 353 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 368 385 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 99 113 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 168 188 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 61 85 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 PRINTS PR00906 SecA protein signature 405 418 2.2E-71 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Gene3D G3DSA:1.10.1200.230 635 717 0.0 T 14-10-2018 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 794 19.375 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DKL56_02615 cbff0227b5629275379ec87c3dde9872 799 SMART SM00957 5 394 6.8E-275 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 PIRSF PIRSF000545 1 304 6.9E-119 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 3 303 3.1E-94 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 82 230 3.5E-10 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 Hamap MF_00215 Pantothenate kinase [coaA]. 1 304 133.547 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 Gene3D G3DSA:3.40.50.300 1 304 9.6E-83 T 14-10-2018 DKL56_00820 8473ff2c1f5bea8f7c02fbbcb938d539 304 SUPERFAMILY SSF52540 3 302 9.03E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Gene3D G3DSA:1.20.150.20 372 499 2.2E-51 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 SUPERFAMILY SSF52540 95 370 3.8E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.342 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.9E-68 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 SUPERFAMILY SSF50615 10 94 8.89E-28 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 92 1.1E-16 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Gene3D G3DSA:3.40.50.300 94 371 2.1E-121 T 14-10-2018 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 PIRSF PIRSF039088 1 501 4.1E-235 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 5.7E-47 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 SUPERFAMILY SSF47917 372 498 7.06E-47 T 14-10-2018 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 Gene3D G3DSA:2.40.30.20 1 93 3.8E-32 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 498 6.1E-246 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03215 919b4e17a16b6f3ca8bd47cf413181de 503 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 9 330 3.9E-30 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 299 9.8E-51 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 SUPERFAMILY SSF51735 104 301 1.55E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 SUPERFAMILY SSF52283 1 136 4.73E-36 T 14-10-2018 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 Gene3D G3DSA:3.40.50.720 6 320 2.2E-127 T 14-10-2018 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 Gene3D G3DSA:3.40.50.720 104 299 2.2E-127 T 14-10-2018 DKL56_00325 4d88e93186168524eb7b2cb59047ba98 336 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 SMART SM00382 28 216 2.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 Pfam PF00005 ABC transporter 19 167 1.6E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 PIRSF PIRSF039085 1 244 9.3E-98 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 Gene3D G3DSA:3.40.50.300 1 243 3.8E-73 T 14-10-2018 DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05110 cce32cb2086bb122fe2759e5dbf37c2f 245 SUPERFAMILY SSF52540 3 238 7.43E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:2.70.150.10 27 253 1.4E-70 T 14-10-2018 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:3.40.50.1000 348 360 1.4E-70 T 14-10-2018 IPR023214 HAD superfamily DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:3.40.1110.10 412 530 3.0E-77 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 SUPERFAMILY SSF81660 357 534 9.59E-40 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Pfam PF00690 Cation transporter/ATPase, N-terminus 24 87 2.5E-12 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Pfam PF00702 haloacid dehalogenase-like hydrolase 349 637 8.6E-21 T 14-10-2018 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 353 359 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:1.20.1110.10 54 347 1.4E-70 T 14-10-2018 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 SMART SM00831 19 92 1.5E-9 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 SUPERFAMILY SSF56784 516 669 1.44E-36 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 799 820 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 681 696 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 849 870 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 751 767 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 264 280 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 699 710 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 731 744 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 281 300 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 PRINTS PR01836 Magnesium-transporting ATPase signature 385 398 5.8E-56 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 18 890 0.0 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:1.20.1110.10 668 776 3.0E-77 T 14-10-2018 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 263 386 4.4E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 590 711 5.2E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 SUPERFAMILY SSF81665 23 890 3.01E-90 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Pfam PF00122 E1-E2 ATPase 136 331 7.5E-43 T 14-10-2018 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 SUPERFAMILY SSF81653 140 249 6.02E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_06630 9a9edbae08f46caadd4da05349c926a0 896 Gene3D G3DSA:3.40.50.1000 531 667 3.0E-77 T 14-10-2018 IPR023214 HAD superfamily DKL56_01980 106412c4f9700a228e8bb5f03849a7d4 205 Pfam PF00881 Nitroreductase family 10 184 9.2E-26 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DKL56_01980 106412c4f9700a228e8bb5f03849a7d4 205 SUPERFAMILY SSF55469 4 203 1.1E-47 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_01980 106412c4f9700a228e8bb5f03849a7d4 205 Gene3D G3DSA:3.40.109.10 1 205 2.0E-53 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Gene3D G3DSA:3.40.50.300 282 418 2.5E-53 T 14-10-2018 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 SMART SM00490 464 550 2.7E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Gene3D G3DSA:4.10.860.10 616 666 3.7E-6 T 14-10-2018 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 SUPERFAMILY SSF46600 626 666 2.48E-10 T 14-10-2018 IPR036876 UVR domain superfamily DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 SUPERFAMILY SSF52540 39 590 1.55E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Pfam PF04851 Type III restriction enzyme, res subunit 16 143 1.2E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Pfam PF02151 UvrB/uvrC motif 630 664 7.4E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Gene3D G3DSA:3.40.50.300 2 246 7.6E-85 T 14-10-2018 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 SMART SM00487 14 430 6.0E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Pfam PF12344 Ultra-violet resistance protein B 556 598 4.7E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 SUPERFAMILY SSF52540 9 419 4.81E-138 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 662 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Pfam PF00271 Helicase conserved C-terminal domain 441 549 7.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 665 43.022 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DKL56_02655 0a382490cf0bb25142b9d025933deaeb 680 Gene3D G3DSA:3.40.50.300 419 600 1.7E-51 T 14-10-2018 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 Pfam PF00005 ABC transporter 18 156 6.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 Gene3D G3DSA:3.40.50.300 1 242 6.8E-52 T 14-10-2018 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 SMART SM00382 27 204 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00515 b6f2639489394b49c96334f0adb66963 451 SMART SM00382 261 446 5.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00515 b6f2639489394b49c96334f0adb66963 451 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 Gene3D G3DSA:3.40.50.300 243 451 1.9E-43 T 14-10-2018 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 SUPERFAMILY SSF52540 2 208 2.33E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00515 b6f2639489394b49c96334f0adb66963 451 SUPERFAMILY SSF52540 248 448 3.52E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00515 b6f2639489394b49c96334f0adb66963 451 ProSitePatterns PS00211 ABC transporters family signature. 368 382 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00515 b6f2639489394b49c96334f0adb66963 451 Pfam PF00005 ABC transporter 252 395 2.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 SUPERFAMILY SSF56553 48 169 1.83E-41 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 SMART SM00662 18 225 6.3E-92 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Gene3D G3DSA:3.30.1360.10 14 215 1.3E-87 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 149 2.6E-25 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 36.857 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Gene3D G3DSA:2.170.120.12 48 168 1.3E-87 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Gene3D G3DSA:1.10.150.20 216 312 3.6E-32 T 14-10-2018 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 308 2.0E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 3.9E-120 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 3.1E-22 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 SUPERFAMILY SSF47789 246 310 2.62E-23 T 14-10-2018 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 SUPERFAMILY SSF55257 4 223 8.37E-33 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06020 504fb613c8d74c6da60074a80bb53607 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 238 302 4.4E-28 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 SUPERFAMILY SSF54506 2 140 1.62E-22 T 14-10-2018 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 71 85 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 Pfam PF01678 Diaminopimelate epimerase 6 119 9.1E-17 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 Pfam PF01678 Diaminopimelate epimerase 164 285 1.4E-11 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 Gene3D G3DSA:3.10.310.10 5 288 8.3E-63 T 14-10-2018 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 288 1.2E-50 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 295 28.313 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 Gene3D G3DSA:3.10.310.10 129 285 8.3E-63 T 14-10-2018 DKL56_07525 66a5eada9a59323d0050a9e89f5fd1d8 328 SUPERFAMILY SSF54506 153 292 2.92E-28 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 SUPERFAMILY SSF56784 377 676 9.0E-52 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 Gene3D G3DSA:3.40.1110.10 389 503 1.5E-80 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 Gene3D G3DSA:3.40.50.1000 372 621 1.5E-80 T 14-10-2018 IPR023214 HAD superfamily DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 152 650 7.8E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 Pfam PF00122 E1-E2 ATPase 179 357 5.0E-43 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 378 392 5.3E-24 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 528 5.3E-24 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 571 590 5.3E-24 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 606 5.3E-24 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 229 243 5.3E-24 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 Gene3D G3DSA:2.70.150.20 173 284 6.8E-29 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 SUPERFAMILY SSF81665 125 368 1.03E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 142 677 1.2E-108 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 SUPERFAMILY SSF81653 182 276 4.32E-19 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 111 676 1.5E-165 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 380 386 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 93 680 1.3E-176 T 14-10-2018 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 571 587 3.5E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 543 559 3.5E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04260 447c4e37d15f7feb7561fa7f90d71040 681 Pfam PF00702 haloacid dehalogenase-like hydrolase 374 585 3.0E-37 T 14-10-2018 DKL56_03460 9bf6d255cb79b63a1017efeb39d83024 219 SMART SM00855 2 163 7.1E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_03460 9bf6d255cb79b63a1017efeb39d83024 219 PIRSF PIRSF000709 1 212 1.9E-15 T 14-10-2018 DKL56_03460 9bf6d255cb79b63a1017efeb39d83024 219 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 205 3.3E-50 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_03460 9bf6d255cb79b63a1017efeb39d83024 219 SUPERFAMILY SSF53254 1 211 4.71E-49 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_03460 9bf6d255cb79b63a1017efeb39d83024 219 Gene3D G3DSA:3.40.50.1240 1 214 5.7E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_01840 d4fb2edb74bba767ad2ff418d51073ad 347 Gene3D G3DSA:3.40.50.2000 153 317 3.1E-24 T 14-10-2018 DKL56_01840 d4fb2edb74bba767ad2ff418d51073ad 347 Gene3D G3DSA:3.40.50.2000 22 152 1.8E-9 T 14-10-2018 DKL56_01840 d4fb2edb74bba767ad2ff418d51073ad 347 Pfam PF13439 Glycosyltransferase Family 4 45 140 4.6E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DKL56_01840 d4fb2edb74bba767ad2ff418d51073ad 347 SUPERFAMILY SSF53756 44 335 1.05E-47 T 14-10-2018 DKL56_01840 d4fb2edb74bba767ad2ff418d51073ad 347 Pfam PF00534 Glycosyl transferases group 1 152 303 1.0E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_07705 e70e96b584edb252913e709398d95446 504 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 4 504 3.5E-191 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 DKL56_07705 e70e96b584edb252913e709398d95446 504 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 504 232.718 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 DKL56_07705 e70e96b584edb252913e709398d95446 504 Gene3D G3DSA:3.30.300.30 395 504 1.1E-22 T 14-10-2018 DKL56_07705 e70e96b584edb252913e709398d95446 504 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 14-10-2018 IPR020845 AMP-binding, conserved site DKL56_07705 e70e96b584edb252913e709398d95446 504 Pfam PF00501 AMP-binding enzyme 12 401 2.8E-73 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DKL56_07705 e70e96b584edb252913e709398d95446 504 SUPERFAMILY SSF56801 8 502 1.7E-104 T 14-10-2018 DKL56_07705 e70e96b584edb252913e709398d95446 504 Gene3D G3DSA:3.40.50.12780 1 394 2.4E-99 T 14-10-2018 DKL56_03720 a527606ff7279380c06d923740ca499d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 153 1.4E-25 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 344 1.6E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 PIRSF PIRSF006485 2 436 5.1E-168 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 5.0E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.8E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 Gene3D G3DSA:3.30.300.20 353 436 1.0E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_03720 a527606ff7279380c06d923740ca499d 436 SUPERFAMILY SSF52540 138 434 5.66E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03720 a527606ff7279380c06d923740ca499d 436 SUPERFAMILY SSF52540 5 168 5.36E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03720 a527606ff7279380c06d923740ca499d 436 Gene3D G3DSA:3.40.50.300 2 162 3.1E-46 T 14-10-2018 DKL56_03720 a527606ff7279380c06d923740ca499d 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 431 1.9E-31 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DKL56_03720 a527606ff7279380c06d923740ca499d 436 Gene3D G3DSA:3.40.50.300 169 351 3.6E-52 T 14-10-2018 DKL56_03720 a527606ff7279380c06d923740ca499d 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 430 3.5E-173 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DKL56_03720 a527606ff7279380c06d923740ca499d 436 Hamap MF_00195 GTPase Der [der]. 3 436 39.215 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DKL56_00825 d1023efa110bba480327858f3da391da 190 SMART SM00841 130 185 1.7E-28 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DKL56_00825 d1023efa110bba480327858f3da391da 190 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DKL56_00825 d1023efa110bba480327858f3da391da 190 Gene3D G3DSA:2.30.30.30 1 63 1.0E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DKL56_00825 d1023efa110bba480327858f3da391da 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 5.0E-21 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DKL56_00825 d1023efa110bba480327858f3da391da 190 Gene3D G3DSA:2.40.50.140 64 128 2.5E-20 T 14-10-2018 DKL56_00825 d1023efa110bba480327858f3da391da 190 SMART SM01185 67 121 4.1E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DKL56_00825 d1023efa110bba480327858f3da391da 190 SUPERFAMILY SSF50104 1 62 6.62E-17 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_00825 d1023efa110bba480327858f3da391da 190 Gene3D G3DSA:2.40.50.140 129 186 4.5E-22 T 14-10-2018 DKL56_00825 d1023efa110bba480327858f3da391da 190 PIRSF PIRSF005901 1 187 4.2E-64 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DKL56_00825 d1023efa110bba480327858f3da391da 190 SUPERFAMILY SSF50249 129 186 3.6E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_00825 d1023efa110bba480327858f3da391da 190 Hamap MF_00141 Elongation factor P [efp]. 1 186 44.049 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DKL56_00825 d1023efa110bba480327858f3da391da 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 118 3.3E-18 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DKL56_00825 d1023efa110bba480327858f3da391da 190 SUPERFAMILY SSF50249 65 130 4.71E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_00825 d1023efa110bba480327858f3da391da 190 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.4E-21 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DKL56_00825 d1023efa110bba480327858f3da391da 190 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 1.3E-66 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DKL56_07590 3bc29c9165c9311d41fdf065f36fb644 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 384 1.4E-112 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DKL56_07590 3bc29c9165c9311d41fdf065f36fb644 391 Gene3D G3DSA:3.40.640.10 64 288 1.2E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_07590 3bc29c9165c9311d41fdf065f36fb644 391 Pfam PF00155 Aminotransferase class I and II 39 374 1.8E-32 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DKL56_07590 3bc29c9165c9311d41fdf065f36fb644 391 SUPERFAMILY SSF53383 9 386 8.29E-84 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_07590 3bc29c9165c9311d41fdf065f36fb644 391 Gene3D G3DSA:3.90.1150.10 15 380 1.2E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_01070 81e3c696aa66feeab0f49f3c024f4ebb 101 SUPERFAMILY SSF143430 1 82 1.11E-14 T 14-10-2018 DKL56_01070 81e3c696aa66feeab0f49f3c024f4ebb 101 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 94 1.7E-22 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DKL56_01070 81e3c696aa66feeab0f49f3c024f4ebb 101 Pfam PF09827 CRISPR associated protein Cas2 1 80 2.8E-18 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 DKL56_01070 81e3c696aa66feeab0f49f3c024f4ebb 101 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 100 13.76 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 PIRSF PIRSF001563 1 423 7.8E-112 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 SUPERFAMILY SSF53623 5 285 1.16E-77 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 Gene3D G3DSA:3.90.190.20 289 417 1.8E-24 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 Gene3D G3DSA:3.40.1190.10 2 286 4.3E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 69 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 SUPERFAMILY SSF53244 289 418 3.66E-23 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 Pfam PF08245 Mur ligase middle domain 47 245 4.0E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_03310 ee42324e91bc34ad5c1ecefcbe7e0965 424 TIGRFAM TIGR01499 folC: bifunctional protein FolC 26 415 1.7E-103 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 Pfam PF00561 alpha/beta hydrolase fold 27 281 3.4E-20 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 Gene3D G3DSA:3.40.50.1820 5 295 5.3E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 28 36 4.0E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 58 69 4.0E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 4.0E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 3 294 8.2E-127 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 PIRSF PIRSF005539 1 302 6.2E-103 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_01090 7d9da31912f4dd63b0d302035638b085 304 SUPERFAMILY SSF53474 9 294 1.14E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_01505 9c03e25ea9ef061f5b6803932ecdab32 352 TIGRFAM TIGR04320 Surf_Exclu_PgrA: SEC10/PgrA surface exclusion domain 99 348 2.0E-32 T 14-10-2018 IPR027607 SEC10/PgrA surface exclusion domain DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 Gene3D G3DSA:3.40.50.10490 39 222 3.3E-67 T 14-10-2018 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 SUPERFAMILY SSF53697 4 441 1.31E-133 T 14-10-2018 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 391 405 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 405 418 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 195 213 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 270 291 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 373 391 1.3E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 405 422 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 Pfam PF00342 Phosphoglucose isomerase 76 421 2.9E-23 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 432 23.865 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 Gene3D G3DSA:3.40.50.10490 223 414 5.4E-73 T 14-10-2018 DKL56_03055 8e9e3232ab82d1f5be118d9e6cf678a3 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 199 212 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 Gene3D G3DSA:1.10.10.10 7 92 5.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 SUPERFAMILY SSF53850 88 298 2.35E-26 T 14-10-2018 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 Gene3D G3DSA:3.40.190.290 94 305 8.6E-32 T 14-10-2018 DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 SUPERFAMILY SSF46785 8 113 3.22E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 Pfam PF03466 LysR substrate binding domain 94 296 2.3E-25 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_00365 dab91247069ad3ac80bbb8ef264a9644 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 4.8E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 SUPERFAMILY SSF55826 218 386 1.96E-29 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 SUPERFAMILY SSF52954 462 565 9.32E-24 T 14-10-2018 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Pfam PF04073 Aminoacyl-tRNA editing domain 257 373 2.5E-29 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Gene3D G3DSA:3.90.960.10 240 387 1.3E-232 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 457 6.8E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 37.717 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 SUPERFAMILY SSF55681 9 476 7.74E-88 T 14-10-2018 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Gene3D G3DSA:3.40.50.800 3 547 1.3E-232 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Pfam PF03129 Anticodon binding domain 476 563 2.3E-14 T 14-10-2018 IPR004154 Anticodon-binding DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 Gene3D G3DSA:3.30.930.10 11 463 1.3E-232 T 14-10-2018 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 9.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 9.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 9.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 9.3E-17 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DKL56_04505 0cb15aee255c7aa8da6172901496f57c 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 562 2.4E-200 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.6E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.6E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.6E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 Pfam PF00381 PTS HPr component phosphorylation site 4 82 3.5E-28 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 Gene3D G3DSA:3.30.1340.10 1 88 2.6E-35 T 14-10-2018 IPR035895 HPr-like superfamily DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 SUPERFAMILY SSF55594 1 83 6.41E-28 T 14-10-2018 IPR035895 HPr-like superfamily DKL56_02460 e09995b58df985c1b30a19afcc5cc365 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.6E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 ProSitePatterns PS01176 Initiation factor 2 signature. 837 859 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 884 16.637 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Gene3D G3DSA:2.40.30.10 558 675 1.0E-36 T 14-10-2018 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Pfam PF11987 Translation-initiation factor 2 672 776 2.7E-38 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 SUPERFAMILY SSF50447 787 883 3.95E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 50 1.7E-16 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 310 354 1.0E-10 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 389 545 1.8E-36 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Gene3D G3DSA:3.40.50.300 383 557 5.4E-75 T 14-10-2018 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Pfam PF00009 Elongation factor Tu GTP binding domain 391 547 2.1E-36 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Gene3D G3DSA:1.10.10.2480 1 69 3.7E-19 T 14-10-2018 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Gene3D G3DSA:2.40.30.10 788 885 5.5E-28 T 14-10-2018 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 298 883 4.2E-244 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 SUPERFAMILY SSF52156 663 793 8.76E-39 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 SUPERFAMILY SSF50447 561 641 3.33E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 SUPERFAMILY SSF52540 379 557 1.32E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04475 7f75c30f7096acce392c2495e45790a8 886 Gene3D G3DSA:3.40.50.10050 680 787 9.4E-40 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 SUPERFAMILY SSF51556 59 307 1.17E-20 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 Hamap MF_01518 Adenine deaminase [ade]. 5 567 30.048 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 Gene3D G3DSA:3.20.20.140 59 302 1.4E-91 T 14-10-2018 DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 Pfam PF01979 Amidohydrolase family 198 328 6.6E-10 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 Pfam PF13382 Adenine deaminase C-terminal domain 391 557 5.1E-46 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 SUPERFAMILY SSF51338 3 327 5.88E-16 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_07460 d6f9d5c27c1cc8ef9d76791d0301de98 567 Gene3D G3DSA:2.30.40.10 3 335 1.4E-91 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 9 250 7.7E-107 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 Gene3D G3DSA:3.40.50.300 1 251 1.2E-66 T 14-10-2018 DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 SMART SM00382 35 239 4.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 Pfam PF00005 ABC transporter 26 182 4.6E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_07180 7607258f12c25d06db93f37d68a095a1 257 SUPERFAMILY SSF52540 9 244 1.54E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 SUPERFAMILY SSF52540 1 225 8.64E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 Gene3D G3DSA:3.40.50.300 1 246 8.2E-70 T 14-10-2018 DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 Pfam PF02687 FtsX-like permease family 681 773 3.7E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 SMART SM00382 30 217 2.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07745 58153e379c52fed7c6d03cf33af373a4 781 Pfam PF00005 ABC transporter 21 169 1.9E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 479 1.4E-144 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 Gene3D G3DSA:3.30.360.10 177 482 2.0E-91 T 14-10-2018 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 481 67.959 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PIRSF PIRSF000110 1 482 7.2E-167 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 3.5E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 3.5E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 3.5E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 3.5E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 325 351 3.5E-39 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 9 188 4.2E-62 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 SUPERFAMILY SSF51735 5 191 1.63E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 479 1.1E-83 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 Gene3D G3DSA:3.40.50.720 2 176 4.9E-58 T 14-10-2018 DKL56_05465 544d56863c6a1e9f41cac0486958cfba 482 SUPERFAMILY SSF55347 183 481 3.14E-86 T 14-10-2018 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 PIRSF PIRSF002158 6 277 1.7E-98 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 47.385 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 SUPERFAMILY SSF50104 126 272 7.22E-58 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 SMART SM01382 124 253 3.2E-90 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Gene3D G3DSA:4.10.950.10 196 276 5.4E-33 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Gene3D G3DSA:2.30.30.30 115 195 2.7E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 9.1E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 1.8E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 9.8E-133 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 Gene3D G3DSA:2.40.50.140 1 114 1.1E-44 T 14-10-2018 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 SMART SM01383 42 118 4.4E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06135 dcfde2f51b471a1e1bb40d7ef7191308 278 SUPERFAMILY SSF50249 2 125 1.58E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06320 6571305513728063723c5e2005c5c2bc 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 206 2.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_06320 6571305513728063723c5e2005c5c2bc 225 Gene3D G3DSA:1.10.3720.10 7 224 8.8E-44 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06320 6571305513728063723c5e2005c5c2bc 225 SUPERFAMILY SSF161098 17 210 6.67E-39 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06320 6571305513728063723c5e2005c5c2bc 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 15 113 1.5E-22 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_06520 a254810d071f452f3ece44076eea1922 530 Pfam PF00005 ABC transporter 340 481 1.3E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06520 a254810d071f452f3ece44076eea1922 530 SUPERFAMILY SSF90123 5 290 1.31E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_06520 a254810d071f452f3ece44076eea1922 530 ProSitePatterns PS00211 ABC transporters family signature. 454 468 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06520 a254810d071f452f3ece44076eea1922 530 Pfam PF00664 ABC transporter transmembrane region 16 267 3.7E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_06520 a254810d071f452f3ece44076eea1922 530 SUPERFAMILY SSF52540 316 525 1.52E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06520 a254810d071f452f3ece44076eea1922 530 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_06520 a254810d071f452f3ece44076eea1922 530 SMART SM00382 345 528 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06520 a254810d071f452f3ece44076eea1922 530 Gene3D G3DSA:1.20.1560.10 3 304 5.4E-22 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_06520 a254810d071f452f3ece44076eea1922 530 Gene3D G3DSA:3.40.50.300 305 528 4.5E-45 T 14-10-2018 DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 PIRSF PIRSF002070 1 159 3.4E-37 T 14-10-2018 DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 Gene3D G3DSA:2.40.50.140 1 113 1.5E-42 T 14-10-2018 DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 Pfam PF00436 Single-strand binding protein family 2 102 9.8E-34 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 33.509 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 SUPERFAMILY SSF50249 1 173 1.71E-55 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_00040 1cf3c2051654eaaf1512de46b59f0fa1 173 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 173 1.7E-44 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 180 269 6.0E-15 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 Pfam PF02378 Phosphotransferase system, EIIC 307 594 1.1E-18 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 Gene3D G3DSA:3.40.930.10 1 156 3.2E-47 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 Gene3D G3DSA:3.40.50.2300 168 277 8.6E-36 T 14-10-2018 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 1.2E-37 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 SUPERFAMILY SSF52794 178 277 8.37E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 289 647 5.8E-99 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 10 133 5.5E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 179 257 3.5E-25 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DKL56_06950 fa6b98a8399157c579c6903942a3d440 656 SUPERFAMILY SSF55804 1 148 2.75E-44 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 Pfam PF00005 ABC transporter 20 176 2.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 SUPERFAMILY SSF52540 4 234 1.77E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 SMART SM00382 29 240 7.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 Gene3D G3DSA:3.40.50.300 1 249 1.4E-68 T 14-10-2018 DKL56_05645 95bcce7752624c19a01530b0ab26ccb8 251 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 251 3.2E-116 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 90 106 1.8E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 1.8E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.8E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 1.8E-15 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 Gene3D G3DSA:3.90.230.10 1 266 9.0E-88 T 14-10-2018 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 256 5.8E-73 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 SUPERFAMILY SSF55920 1 255 1.28E-68 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 Hamap MF_01974 Methionine aminopeptidase [map]. 2 257 34.661 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_02370 eaeee45ecb14b0b1471cd0e5ded315f5 275 Pfam PF00557 Metallopeptidase family M24 12 248 2.6E-44 T 14-10-2018 IPR000994 Peptidase M24 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 Gene3D G3DSA:2.30.30.30 124 181 8.6E-22 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 5.7E-59 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 9.5E-13 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 9.5E-13 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 9.5E-13 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 Pfam PF02357 Transcription termination factor nusG 7 114 4.7E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 Gene3D G3DSA:3.30.70.940 1 123 2.0E-45 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 SUPERFAMILY SSF82679 6 118 3.79E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 SUPERFAMILY SSF50104 125 181 6.45E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 Pfam PF00467 KOW motif 130 160 1.8E-5 T 14-10-2018 IPR005824 KOW DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 26.844 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 SMART SM00739 127 154 2.3E-4 T 14-10-2018 IPR005824 KOW DKL56_05680 fd6783c2c26d6d67fb3eb23269d6654a 182 SMART SM00738 6 117 2.6E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 Gene3D G3DSA:1.20.1250.20 262 466 8.1E-23 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 SUPERFAMILY SSF103473 6 461 1.96E-64 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 1.8E-11 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 1.8E-11 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 1.8E-11 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 1.8E-11 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 Pfam PF07690 Major Facilitator Superfamily 20 411 9.5E-46 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 Gene3D G3DSA:1.20.1720.10 16 232 5.5E-38 T 14-10-2018 DKL56_06965 a9aba529e06d685218b44118e3bf304e 468 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 420 2.8E-84 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 PIRSF PIRSF000538 3 498 6.9E-171 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 Gene3D G3DSA:3.30.420.40 2 253 6.5E-113 T 14-10-2018 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 4.6E-55 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 SUPERFAMILY SSF53067 255 493 6.48E-79 T 14-10-2018 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 494 9.9E-221 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 1.0E-85 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 Gene3D G3DSA:3.30.420.40 254 498 3.5E-85 T 14-10-2018 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 56.347 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DKL56_07345 0fab352c2a95abaae978e582c92a0638 500 SUPERFAMILY SSF53067 5 254 1.9E-97 T 14-10-2018 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Pfam PF01751 Toprim domain 13 122 1.5E-30 T 14-10-2018 IPR006171 TOPRIM domain DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Gene3D G3DSA:1.10.460.10 144 555 2.7E-158 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 SMART SM00437 252 515 1.8E-103 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 583 618 6.5E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 622 659 5.2E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Gene3D G3DSA:3.40.50.140 7 143 8.0E-55 T 14-10-2018 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 14 616 1.2E-242 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Gene3D G3DSA:2.70.20.10 193 462 2.7E-158 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Hamap MF_00952 DNA topoisomerase 1 [topA]. 12 647 54.065 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 SMART SM00436 113 201 1.5E-51 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 7.1E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 380 396 7.1E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 86 99 7.1E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 478 492 7.1E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 171 189 7.1E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 SUPERFAMILY SSF57783 578 618 5.44E-13 T 14-10-2018 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 SUPERFAMILY SSF56712 12 594 2.22E-191 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 289 312 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 SMART SM00493 12 112 3.1E-33 T 14-10-2018 IPR006171 TOPRIM domain DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Gene3D G3DSA:3.30.65.10 566 621 2.6E-12 T 14-10-2018 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Pfam PF01131 DNA topoisomerase 137 553 9.9E-131 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DKL56_03780 fa4b47cb4d8e157d3eca833be29fd746 701 Gene3D G3DSA:1.10.290.10 260 395 2.7E-158 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DKL56_00270 ad38682aa4188d5748d21126da9d8ccb 282 SMART SM00530 6 60 0.007 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_00270 ad38682aa4188d5748d21126da9d8ccb 282 Pfam PF01381 Helix-turn-helix 7 52 1.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_00270 ad38682aa4188d5748d21126da9d8ccb 282 SUPERFAMILY SSF47413 1 62 3.38E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_00270 ad38682aa4188d5748d21126da9d8ccb 282 Gene3D G3DSA:1.10.260.40 1 65 1.7E-9 T 14-10-2018 DKL56_00270 ad38682aa4188d5748d21126da9d8ccb 282 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 76 281 8.7E-16 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 Pfam PF07702 UTRA domain 97 233 2.4E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 SUPERFAMILY SSF46785 1 77 9.09E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 SMART SM00345 14 73 1.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 SMART SM00866 96 234 6.2E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 SUPERFAMILY SSF64288 63 237 5.65E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 Gene3D G3DSA:1.10.10.10 8 77 3.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01460 8538a0541e22d9ec8acdeeffa91f6075 239 Gene3D G3DSA:3.40.1410.10 78 239 1.5E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_04805 570923315e3ab75f973a2c1938c768c3 288 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DKL56_04805 570923315e3ab75f973a2c1938c768c3 288 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DKL56_04805 570923315e3ab75f973a2c1938c768c3 288 Gene3D G3DSA:1.10.600.10 1 285 3.2E-85 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DKL56_04805 570923315e3ab75f973a2c1938c768c3 288 SUPERFAMILY SSF48576 5 276 1.34E-73 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DKL56_04805 570923315e3ab75f973a2c1938c768c3 288 Pfam PF00348 Polyprenyl synthetase 29 267 2.2E-51 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DKL56_01585 cb73784dbeade39eb73c944ad8889984 101 Hamap MF_01448 UPF0473 protein . 8 95 21.242 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 DKL56_01585 cb73784dbeade39eb73c944ad8889984 101 ProSitePatterns PS00018 EF-hand calcium-binding domain. 61 73 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site DKL56_01585 cb73784dbeade39eb73c944ad8889984 101 Pfam PF06949 Protein of unknown function (DUF1292) 17 94 2.8E-15 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Gene3D G3DSA:3.10.20.580 448 554 6.9E-38 T 14-10-2018 DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Gene3D G3DSA:3.60.15.10 6 425 3.8E-137 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 3.7E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 404 1.6E-6 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Hamap MF_01491 Ribonuclease J [rnj]. 1 554 37.744 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 SUPERFAMILY SSF56281 6 419 3.93E-73 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 SMART SM00849 17 213 3.7E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 Gene3D G3DSA:3.40.50.10710 205 362 3.8E-137 T 14-10-2018 DKL56_03570 c621a758b35419ab95f3fed2de0c3ba6 594 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 5 552 6.1E-156 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 SMART SM00422 1 69 2.8E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 Gene3D G3DSA:1.10.1660.10 1 117 1.5E-29 T 14-10-2018 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 Pfam PF13411 MerR HTH family regulatory protein 1 62 3.7E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 2.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_00255 2d41f92b686bfae9e94bdf983bb49805 117 SUPERFAMILY SSF46955 1 113 7.69E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 22 233 4.4E-44 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 PRINTS PR00123 ATP synthase A subunit signature 78 94 7.1E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 PRINTS PR00123 ATP synthase A subunit signature 217 232 7.1E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 PRINTS PR00123 ATP synthase A subunit signature 146 161 7.1E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 PRINTS PR00123 ATP synthase A subunit signature 162 184 7.1E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 237 12.543 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 SUPERFAMILY SSF81336 72 231 1.27E-37 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 Pfam PF00119 ATP synthase A chain 22 230 7.3E-51 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03195 bd4fb0f03677f13e78aacf3ae01dab6f 237 Gene3D G3DSA:1.20.120.220 70 236 9.0E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03770 671d2c8e1688f38a4fff0bc279d503dd 251 Hamap MF_00052_B Ribonuclease HII [rnhB]. 68 246 36.302 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 DKL56_03770 671d2c8e1688f38a4fff0bc279d503dd 251 Pfam PF01351 Ribonuclease HII 70 245 4.7E-38 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain DKL56_03770 671d2c8e1688f38a4fff0bc279d503dd 251 Gene3D G3DSA:3.30.420.10 44 251 1.4E-77 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_03770 671d2c8e1688f38a4fff0bc279d503dd 251 SUPERFAMILY SSF53098 60 250 5.01E-69 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 Gene3D G3DSA:3.30.260.10 135 408 1.3E-232 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 1.6E-104 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 39.838 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 SUPERFAMILY SSF48592 5 519 5.73E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 525 6.4E-250 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 SUPERFAMILY SSF52029 182 374 4.64E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 SUPERFAMILY SSF54849 137 205 4.12E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 Gene3D G3DSA:1.10.560.10 7 519 1.3E-232 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 Gene3D G3DSA:3.50.7.10 190 370 1.3E-232 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 PRINTS PR00298 60kDa chaperonin signature 26 52 7.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 PRINTS PR00298 60kDa chaperonin signature 266 289 7.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 PRINTS PR00298 60kDa chaperonin signature 82 109 7.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 PRINTS PR00298 60kDa chaperonin signature 396 417 7.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_05510 e4ccb5099238c100075987bb75e8d904 542 PRINTS PR00298 60kDa chaperonin signature 348 373 7.0E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DKL56_07790 8968c1a244ab903a218a72004dbd5834 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 265 8.0E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_07790 8968c1a244ab903a218a72004dbd5834 275 Gene3D G3DSA:3.40.190.10 41 264 6.7E-68 T 14-10-2018 DKL56_07790 8968c1a244ab903a218a72004dbd5834 275 SUPERFAMILY SSF53850 2 266 7.76E-60 T 14-10-2018 DKL56_07790 8968c1a244ab903a218a72004dbd5834 275 SMART SM00062 39 267 1.1E-56 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_07790 8968c1a244ab903a218a72004dbd5834 275 Gene3D G3DSA:3.40.190.10 125 223 6.7E-68 T 14-10-2018 DKL56_07015 eebe29d54392411f09f418841099c861 322 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 2.9E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 PRINTS PR00139 Asparaginase/glutaminase family signature 79 97 2.9E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 2.9E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 SMART SM00870 4 317 2.3E-137 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 80 90 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 Gene3D G3DSA:3.40.50.1170 1 206 1.6E-63 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 Gene3D G3DSA:3.40.50.40 207 321 2.6E-26 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 PIRSF PIRSF500176 1 322 1.4E-89 T 14-10-2018 DKL56_07015 eebe29d54392411f09f418841099c861 322 Pfam PF00710 Asparaginase, N-terminal 4 190 1.3E-56 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DKL56_07015 eebe29d54392411f09f418841099c861 322 SUPERFAMILY SSF53774 3 321 2.49E-96 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DKL56_07015 eebe29d54392411f09f418841099c861 322 PIRSF PIRSF001220 1 322 1.4E-91 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SMART SM00487 611 801 7.6E-35 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Pfam PF03461 TRCF domain 1016 1104 2.9E-26 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1086 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:3.40.50.11180 35 303 5.4E-57 T 14-10-2018 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF52540 22 361 1.06E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:3.40.50.300 553 792 5.6E-238 T 14-10-2018 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Pfam PF00270 DEAD/DEAH box helicase 617 775 5.5E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Pfam PF02559 CarD-like/TRCF domain 491 586 3.9E-31 T 14-10-2018 IPR003711 CarD-like/TRCF domain DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF143517 1001 1154 4.84E-32 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF141259 481 559 7.06E-25 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:2.30.30.840 494 552 5.6E-238 T 14-10-2018 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1107 27.902 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SMART SM00490 837 921 4.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:3.40.50.300 489 999 5.6E-238 T 14-10-2018 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF52540 370 479 1.59E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SMART SM01058 490 587 2.4E-50 T 14-10-2018 IPR003711 CarD-like/TRCF domain DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SMART SM00982 1014 1113 5.8E-37 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:3.90.1150.50 1010 1163 5.2E-39 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Pfam PF00271 Helicase conserved C-terminal domain 817 920 1.1E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF52540 535 794 5.2E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06270 18482e563f137ad175c73d03addb0496 1163 SUPERFAMILY SSF52540 793 999 1.5E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06270 18482e563f137ad175c73d03addb0496 1163 Gene3D G3DSA:3.30.2060.10 138 223 5.4E-57 T 14-10-2018 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 2.3E-84 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 Gene3D G3DSA:3.30.420.40 1 253 6.7E-109 T 14-10-2018 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 494 2.5E-220 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 PIRSF PIRSF000538 3 500 1.3E-167 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 1.7E-55 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 56.495 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 Gene3D G3DSA:3.30.420.40 254 499 8.9E-87 T 14-10-2018 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 SUPERFAMILY SSF53067 255 494 1.74E-79 T 14-10-2018 DKL56_03010 b0c3f6c5e4072f5f6b920322bad4f707 504 SUPERFAMILY SSF53067 4 254 1.94E-96 T 14-10-2018 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 473 488 3.7E-5 T 14-10-2018 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 14 36 3.7E-5 T 14-10-2018 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 315 322 3.7E-5 T 14-10-2018 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 Gene3D G3DSA:3.50.50.60 13 480 3.5E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 SUPERFAMILY SSF51905 7 485 1.15E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 Gene3D G3DSA:3.90.700.10 277 421 3.5E-91 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 SUPERFAMILY SSF56425 292 429 6.28E-20 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 Pfam PF04205 FMN-binding domain 532 604 5.3E-11 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 Gene3D G3DSA:3.90.1010.20 539 608 1.1E-5 T 14-10-2018 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 SMART SM00900 532 607 9.5E-18 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_05275 b5dd5c91acbbf792e0baa353fbbcf376 608 Pfam PF00890 FAD binding domain 14 466 4.2E-28 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Pfam PF06458 MucBP domain 545 607 1.7E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 SUPERFAMILY SSF52058 139 472 3.4E-23 T 14-10-2018 DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Gene3D G3DSA:3.80.10.10 349 517 1.6E-8 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Gene3D G3DSA:3.80.10.10 102 348 2.7E-19 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 270 293 4.3E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 212 237 2.8E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 404 425 4.3E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 238 269 1.4E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 297 321 6.0E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 322 346 3.1E-11 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 375 400 1.3E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 426 448 4.2E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 156 246 1.0E-15 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 343 458 7.7E-21 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 257 302 8.8E-10 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07275 254ac057336ba69cc6762359b6cb7a9d 709 Gene3D G3DSA:3.10.20.320 539 620 1.1E-24 T 14-10-2018 DKL56_07615 ea5141f9eec34cc40fa8beec75ade21f 273 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 14 271 2.0E-72 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SMART SM00740 604 664 9.9E-10 T 14-10-2018 IPR005543 PASTA domain DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SMART SM00740 665 721 0.51 T 14-10-2018 IPR005543 PASTA domain DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Gene3D G3DSA:3.30.70.2110 90 174 1.1E-53 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Pfam PF00905 Penicillin binding protein transpeptidase domain 283 591 3.2E-75 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Gene3D G3DSA:3.90.1310.10 71 223 1.1E-53 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Gene3D G3DSA:2.20.70.70 66 242 1.1E-53 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Gene3D G3DSA:3.40.710.10 250 608 2.0E-94 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SUPERFAMILY SSF54184 666 720 3.66E-9 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SUPERFAMILY SSF54184 606 664 6.67E-11 T 14-10-2018 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 235 6.6E-25 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SUPERFAMILY SSF56601 207 595 1.72E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 SUPERFAMILY SSF56519 65 256 1.23E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Pfam PF03793 PASTA domain 668 719 7.5E-5 T 14-10-2018 IPR005543 PASTA domain DKL56_03365 44258a3c7601079c2acf8c71a35c9302 721 Pfam PF03793 PASTA domain 609 663 1.7E-9 T 14-10-2018 IPR005543 PASTA domain DKL56_00370 a5173653e61b8832501afb4894b945ec 626 SUPERFAMILY SSF56425 402 552 4.64E-35 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_00370 a5173653e61b8832501afb4894b945ec 626 Pfam PF04205 FMN-binding domain 18 85 1.0E-10 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_00370 a5173653e61b8832501afb4894b945ec 626 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 235 608 4.4E-93 T 14-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 DKL56_00370 a5173653e61b8832501afb4894b945ec 626 Pfam PF00890 FAD binding domain 113 596 6.2E-72 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_00370 a5173653e61b8832501afb4894b945ec 626 Gene3D G3DSA:3.90.1010.20 21 96 6.5E-7 T 14-10-2018 DKL56_00370 a5173653e61b8832501afb4894b945ec 626 SUPERFAMILY SSF51905 99 617 2.36E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_00370 a5173653e61b8832501afb4894b945ec 626 SMART SM00900 12 87 2.4E-14 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Gene3D G3DSA:3.30.310.50 462 570 3.7E-9 T 14-10-2018 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 SUPERFAMILY SSF53738 306 454 1.14E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 495 554 4.1E-8 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Gene3D G3DSA:3.40.120.10 324 455 6.9E-32 T 14-10-2018 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 327 453 4.0E-18 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 SUPERFAMILY SSF55957 471 570 1.24E-13 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 318 4.3E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Gene3D G3DSA:3.40.120.10 233 313 1.9E-15 T 14-10-2018 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 181 2.2E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 Gene3D G3DSA:3.40.120.10 33 189 1.3E-42 T 14-10-2018 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 SUPERFAMILY SSF53738 30 238 6.28E-43 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02650 5d794b8a54d83e68a0fcb21104f570d3 574 SUPERFAMILY SSF53738 209 317 2.86E-17 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 Pfam PF11838 ERAP1-like C-terminal domain 509 815 6.0E-45 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 Pfam PF01433 Peptidase family M1 domain 198 435 4.5E-89 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 Gene3D G3DSA:2.60.40.1730 4 187 3.0E-42 T 14-10-2018 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 Gene3D G3DSA:1.10.390.60 190 459 1.0E-93 T 14-10-2018 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 SUPERFAMILY SSF55486 195 445 6.59E-78 T 14-10-2018 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 Gene3D G3DSA:1.25.50.20 525 843 1.6E-38 T 14-10-2018 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 1.0E-29 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 285 300 1.0E-29 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 170 185 1.0E-29 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 249 259 1.0E-29 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 304 316 1.0E-29 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 DKL56_00735 8f90192cd1ea02e5a88c85045f089cb6 845 SUPERFAMILY SSF63737 6 187 8.24E-45 T 14-10-2018 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 Pfam PF00005 ABC transporter 276 431 6.7E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 Gene3D G3DSA:3.40.50.300 255 497 2.7E-40 T 14-10-2018 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 Gene3D G3DSA:3.40.50.300 2 241 8.5E-56 T 14-10-2018 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 Pfam PF00005 ABC transporter 24 172 1.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06700 8bb76719d02da27af276c5a78361445b 511 SUPERFAMILY SSF52540 7 233 1.42E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06700 8bb76719d02da27af276c5a78361445b 511 SMART SM00382 32 220 2.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06700 8bb76719d02da27af276c5a78361445b 511 SUPERFAMILY SSF52540 259 492 6.85E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 Gene3D G3DSA:3.40.190.10 169 268 7.9E-10 T 14-10-2018 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 SUPERFAMILY SSF46785 1 83 7.89E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 SUPERFAMILY SSF53850 95 280 5.79E-7 T 14-10-2018 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 2.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 Gene3D G3DSA:1.10.10.10 3 69 4.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 Gene3D G3DSA:3.40.190.10 130 168 7.9E-10 T 14-10-2018 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_01150 44085c29a5debc1eeae4ea27f96ace80 303 Pfam PF03466 LysR substrate binding domain 129 271 1.0E-7 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 Gene3D G3DSA:3.65.10.10 6 416 1.4E-144 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 417 4.3E-141 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 Gene3D G3DSA:3.65.10.10 21 232 1.4E-144 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 SUPERFAMILY SSF55205 1 418 5.56E-115 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 38.456 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_06485 aa26cb37ee74c20ed4b647509d13c8a4 424 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 5.8E-73 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 Pfam PF06723 MreB/Mbl protein 7 329 1.8E-138 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 Gene3D G3DSA:3.90.640.10 178 253 1.3E-124 T 14-10-2018 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 329 8.3E-144 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 SUPERFAMILY SSF53067 142 321 1.09E-45 T 14-10-2018 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 294 320 1.6E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 1.6E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 1.6E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 1.6E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 1.6E-57 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 SUPERFAMILY SSF53067 8 140 3.19E-40 T 14-10-2018 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 Gene3D G3DSA:3.30.420.40 9 321 1.3E-124 T 14-10-2018 DKL56_03325 b87c2064debc25e032cb24c613a1afeb 334 Gene3D G3DSA:3.30.420.40 146 311 1.3E-124 T 14-10-2018 DKL56_04680 384d4cb1dd8f29ceaf8806556252d532 590 Gene3D G3DSA:3.40.190.10 57 320 1.7E-25 T 14-10-2018 DKL56_04680 384d4cb1dd8f29ceaf8806556252d532 590 SUPERFAMILY SSF53850 49 585 7.19E-90 T 14-10-2018 DKL56_04680 384d4cb1dd8f29ceaf8806556252d532 590 Gene3D G3DSA:3.10.105.10 321 553 8.7E-73 T 14-10-2018 DKL56_04680 384d4cb1dd8f29ceaf8806556252d532 590 PIRSF PIRSF002741 3 587 1.7E-55 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_04680 384d4cb1dd8f29ceaf8806556252d532 590 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 499 6.7E-59 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_01540 f292bf94eb884e40c04b035956745654 232 Pfam PF07702 UTRA domain 90 227 8.6E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01540 f292bf94eb884e40c04b035956745654 232 SUPERFAMILY SSF64288 56 230 2.83E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01540 f292bf94eb884e40c04b035956745654 232 SUPERFAMILY SSF46785 3 77 1.75E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01540 f292bf94eb884e40c04b035956745654 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01540 f292bf94eb884e40c04b035956745654 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01540 f292bf94eb884e40c04b035956745654 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 1.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01540 f292bf94eb884e40c04b035956745654 232 Gene3D G3DSA:3.40.1410.10 70 232 2.5E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01540 f292bf94eb884e40c04b035956745654 232 SMART SM00866 89 227 8.4E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01540 f292bf94eb884e40c04b035956745654 232 Gene3D G3DSA:1.10.10.10 2 69 3.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01540 f292bf94eb884e40c04b035956745654 232 SMART SM00345 9 68 7.0E-21 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01895 3010ad028184be8789bfa082ab339b63 248 Gene3D G3DSA:3.90.190.10 2 247 6.2E-52 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_01895 3010ad028184be8789bfa082ab339b63 248 SUPERFAMILY SSF52799 3 247 4.39E-44 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_01895 3010ad028184be8789bfa082ab339b63 248 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 138 148 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DKL56_01895 3010ad028184be8789bfa082ab339b63 248 Pfam PF13350 Tyrosine phosphatase family 3 247 2.5E-54 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 Gene3D G3DSA:3.90.170.10 265 429 2.6E-69 T 14-10-2018 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 Gene3D G3DSA:1.10.300.10 100 199 1.1E-97 T 14-10-2018 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 Pfam PF00709 Adenylosuccinate synthetase 4 421 1.4E-176 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 Gene3D G3DSA:3.40.440.10 5 252 1.1E-97 T 14-10-2018 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 426 1.0E-174 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 SMART SM00788 3 422 1.5E-279 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 201.078 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 SUPERFAMILY SSF52540 1 427 7.86E-171 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07390 dba99a18b3e8459512b57f7566d87dd4 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 Gene3D G3DSA:3.30.70.1450 525 604 3.6E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 SUPERFAMILY SSF116726 538 605 9.68E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 Gene3D G3DSA:1.20.1530.20 2 392 5.3E-64 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 Pfam PF00999 Sodium/hydrogen exchanger family 7 382 2.2E-58 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 Pfam PF02080 TrkA-C domain 541 604 1.5E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DKL56_07065 5842f4783008c95f1aae0789bacd99e3 607 SUPERFAMILY SSF51735 393 497 4.23E-5 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 Gene3D G3DSA:2.40.50.530 1 63 2.1E-18 T 14-10-2018 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 Pfam PF01632 Ribosomal protein L35 2 62 1.9E-22 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.1E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.1E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.1E-18 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.39 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 SUPERFAMILY SSF143034 2 62 1.07E-20 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05085 88e8ca21bac71d904481fa4c569f3bcd 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.4E-23 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:3.30.10.20 435 498 2.6E-16 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:3.30.10.20 507 573 1.7E-13 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 SUPERFAMILY SSF56112 9 299 9.85E-84 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Pfam PF00069 Protein kinase domain 12 265 3.0E-56 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 SMART SM00740 430 497 1.9E-14 T 14-10-2018 IPR005543 PASTA domain DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 SMART SM00740 504 570 3.3E-9 T 14-10-2018 IPR005543 PASTA domain DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 SMART SM00740 362 429 6.4E-13 T 14-10-2018 IPR005543 PASTA domain DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 PIRSF PIRSF000615 102 213 2.0E-16 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 PIRSF PIRSF000615 554 652 12.0 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 PIRSF PIRSF000615 28 106 1.2 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:3.30.10.20 362 431 5.4E-17 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 131 143 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:1.10.510.10 93 278 7.7E-55 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 SMART SM00220 12 272 4.3E-72 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:2.60.40.2560 578 658 1.1E-8 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Gene3D G3DSA:3.30.200.20 2 91 7.6E-32 T 14-10-2018 DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Pfam PF03793 PASTA domain 508 569 1.1E-9 T 14-10-2018 IPR005543 PASTA domain DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Pfam PF03793 PASTA domain 366 428 2.7E-13 T 14-10-2018 IPR005543 PASTA domain DKL56_04750 73c727d7ad528307fc7c5fdccfd744b2 659 Pfam PF03793 PASTA domain 435 497 7.9E-14 T 14-10-2018 IPR005543 PASTA domain DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 SUPERFAMILY SSF53271 92 242 6.63E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 Pfam PF00156 Phosphoribosyl transferase domain 105 233 8.1E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 SUPERFAMILY SSF46785 1 72 2.18E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 Gene3D G3DSA:3.40.50.2020 74 271 1.1E-50 T 14-10-2018 DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 Gene3D G3DSA:1.10.10.10 1 71 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 7 71 3.0E-29 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 Pfam PF09182 Bacterial purine repressor, N-terminal 2 71 1.2E-29 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DKL56_06600 779b0ce75a1835bb2489b7cb41e846cc 276 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 1 265 8.0E-98 T 14-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 DKL56_06815 7e9e071b2dd31deaa290a6b584d89f6e 163 Pfam PF00877 NlpC/P60 family 58 154 1.1E-23 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DKL56_06815 7e9e071b2dd31deaa290a6b584d89f6e 163 Gene3D G3DSA:3.90.1720.10 24 163 6.2E-42 T 14-10-2018 DKL56_06815 7e9e071b2dd31deaa290a6b584d89f6e 163 SUPERFAMILY SSF54001 39 152 6.54E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DKL56_04845 778a476e99624346c9953cbb0157c402 97 Pfam PF01016 Ribosomal L27 protein 10 89 8.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 26.754 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 PRINTS PR00063 Ribosomal protein L27 signature 37 61 1.3E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 PRINTS PR00063 Ribosomal protein L27 signature 62 86 1.3E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 PRINTS PR00063 Ribosomal protein L27 signature 12 36 1.3E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 Gene3D G3DSA:2.40.50.100 28 93 2.4E-27 T 14-10-2018 DKL56_04845 778a476e99624346c9953cbb0157c402 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04845 778a476e99624346c9953cbb0157c402 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 90 1.5E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 6.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04845 778a476e99624346c9953cbb0157c402 97 SUPERFAMILY SSF110324 10 92 1.88E-31 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 TIGRFAM TIGR00235 udk: uridine kinase 5 208 2.1E-87 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 Hamap MF_00551 Uridine kinase [udk]. 4 209 40.917 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 Gene3D G3DSA:3.40.50.300 4 213 9.7E-70 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 SUPERFAMILY SSF52540 4 200 2.67E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01905 e5e72fd34ade25395935197292ff797b 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 196 6.1E-49 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 153 164 1.3E-39 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 7 24 1.3E-39 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 175 188 1.3E-39 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 38 49 1.3E-39 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 139 149 1.3E-39 T 14-10-2018 DKL56_01905 e5e72fd34ade25395935197292ff797b 213 PRINTS PR00988 Uridine kinase signature 83 98 1.3E-39 T 14-10-2018 DKL56_06875 b95156bf31a25392ab2b961b19266583 225 Pfam PF13529 Peptidase_C39 like family 37 197 9.9E-39 T 14-10-2018 IPR039564 Peptidase C39-like DKL56_06875 b95156bf31a25392ab2b961b19266583 225 PIRSF PIRSF032442 21 225 1.0E-68 T 14-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 DKL56_06875 b95156bf31a25392ab2b961b19266583 225 Gene3D G3DSA:3.90.70.10 33 225 2.6E-57 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 SUPERFAMILY SSF81665 6 750 2.48E-49 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 488 601 2.2E-24 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 68 329 1.0E-31 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 54 1.0E-6 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:3.40.50.1000 293 305 3.8E-51 T 14-10-2018 IPR023214 HAD superfamily DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:3.40.1110.10 306 321 3.8E-51 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:3.40.50.1000 417 486 1.3E-8 T 14-10-2018 IPR023214 HAD superfamily DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Pfam PF00702 haloacid dehalogenase-like hydrolase 293 526 5.6E-28 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 SMART SM00831 1 60 8.4E-4 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 513 529 1.3E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 674 695 1.3E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 544 569 1.3E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 485 501 1.3E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 298 304 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:1.20.1110.10 489 751 3.2E-34 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 442 452 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 144 158 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 296 310 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 420 431 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 532 1.3E-26 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 SUPERFAMILY SSF56784 294 612 6.61E-38 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:2.70.150.10 4 196 3.8E-51 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Pfam PF00122 E1-E2 ATPase 97 275 1.2E-41 T 14-10-2018 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 SUPERFAMILY SSF81653 98 194 2.22E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 SUPERFAMILY SSF81660 308 429 7.85E-13 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_04415 339b0b4d728b93c5b39363bbdb49c69d 757 Gene3D G3DSA:1.20.1110.10 38 292 3.8E-51 T 14-10-2018 DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 Gene3D G3DSA:1.10.10.2830 114 227 4.0E-36 T 14-10-2018 DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 212 5.4E-61 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 SUPERFAMILY SSF110849 38 129 1.07E-27 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 Pfam PF02195 ParB-like nuclease domain 40 126 1.3E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 SMART SM00470 38 127 2.0E-35 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 Gene3D G3DSA:3.90.1530.30 51 113 6.4E-28 T 14-10-2018 DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 SUPERFAMILY SSF109709 119 229 1.62E-33 T 14-10-2018 DKL56_00925 be1ebf96cb07d44ab62d850c1ec7da37 295 Pfam PF01381 Helix-turn-helix 146 178 1.6E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_05025 4b524b2c9ba9d4d2b5758cd91557b7da 109 SUPERFAMILY SSF54975 19 108 1.26E-21 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DKL56_05025 4b524b2c9ba9d4d2b5758cd91557b7da 109 Gene3D G3DSA:3.30.70.100 3 107 6.5E-22 T 14-10-2018 DKL56_05025 4b524b2c9ba9d4d2b5758cd91557b7da 109 Pfam PF00708 Acylphosphatase 23 106 6.4E-20 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 Gene3D G3DSA:3.50.50.60 13 477 3.3E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 SUPERFAMILY SSF56425 286 426 1.08E-19 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 Pfam PF04205 FMN-binding domain 525 597 1.3E-13 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 Pfam PF00890 FAD binding domain 14 460 5.1E-32 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 Gene3D G3DSA:3.90.700.10 271 418 3.3E-96 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 SUPERFAMILY SSF51905 4 488 9.09E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 SMART SM00900 525 600 9.3E-16 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_07010 f5446ea0a24eb61ebcfb4225adc09e81 602 Gene3D G3DSA:3.90.1010.20 530 602 7.6E-6 T 14-10-2018 DKL56_03580 cfd74e794682f1760e291f5233441947 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 1.7E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 SUPERFAMILY SSF50465 304 396 7.48E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DKL56_03580 cfd74e794682f1760e291f5233441947 396 Gene3D G3DSA:2.40.30.10 340 395 1.1E-26 T 14-10-2018 DKL56_03580 cfd74e794682f1760e291f5233441947 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 4 395 5.9E-217 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_03580 cfd74e794682f1760e291f5233441947 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 150 1.5E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 Gene3D G3DSA:2.40.30.10 207 336 9.2E-52 T 14-10-2018 DKL56_03580 cfd74e794682f1760e291f5233441947 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 2 396 58.767 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_03580 cfd74e794682f1760e291f5233441947 396 Gene3D G3DSA:3.40.50.300 3 204 5.0E-70 T 14-10-2018 DKL56_03580 cfd74e794682f1760e291f5233441947 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.0E-31 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DKL56_03580 cfd74e794682f1760e291f5233441947 396 Pfam PF00009 Elongation factor Tu GTP binding domain 11 202 1.2E-58 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 SUPERFAMILY SSF50447 206 301 4.52E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_03580 cfd74e794682f1760e291f5233441947 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DKL56_03580 cfd74e794682f1760e291f5233441947 396 SUPERFAMILY SSF52540 9 227 2.05E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03580 cfd74e794682f1760e291f5233441947 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03580 cfd74e794682f1760e291f5233441947 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 SMART SM01409 10 63 5.2E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 Gene3D G3DSA:3.90.940.10 3 72 1.5E-19 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 3 64 15.774 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 SUPERFAMILY SSF63562 4 66 5.93E-22 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 Pfam PF01192 RNA polymerase Rpb6 10 62 7.3E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DKL56_04775 314219f9ff335a2963bd26bb9ad62433 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 4 61 2.1E-15 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 SUPERFAMILY SSF53697 17 325 1.82E-54 T 14-10-2018 DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 Gene3D G3DSA:3.40.50.10490 2 151 8.5E-33 T 14-10-2018 DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 PIRSF PIRSF009290 2 325 1.5E-107 T 14-10-2018 IPR024713 Fructosamine deglycase FrlB DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 Gene3D G3DSA:1.10.10.2240 157 305 1.0E-62 T 14-10-2018 DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 Gene3D G3DSA:3.40.50.12570 190 283 1.0E-62 T 14-10-2018 DKL56_01495 133780c5bf09082e3da0c725ad79db26 325 Pfam PF01380 SIS domain 23 127 1.5E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 SMART SM00866 93 235 0.0055 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 SMART SM00345 9 68 0.0019 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 Gene3D G3DSA:1.10.10.10 3 68 9.9E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 Gene3D G3DSA:3.40.1410.10 78 240 5.0E-21 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 Pfam PF07702 UTRA domain 98 232 2.4E-16 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 7.7E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 SUPERFAMILY SSF46785 5 72 3.02E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01915 611682b1cf2ac87da60a0a5c8fe0fecf 242 SUPERFAMILY SSF64288 57 241 4.55E-23 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_07695 1d068ca68783392f4d20a93bee58a13b 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 74 9.3E-27 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 DKL56_07695 1d068ca68783392f4d20a93bee58a13b 79 SUPERFAMILY SSF47336 2 75 1.31E-13 T 14-10-2018 IPR036736 ACP-like superfamily DKL56_07695 1d068ca68783392f4d20a93bee58a13b 79 Gene3D G3DSA:1.10.1200.10 1 79 1.0E-19 T 14-10-2018 IPR036736 ACP-like superfamily DKL56_07695 1d068ca68783392f4d20a93bee58a13b 79 Pfam PF00550 Phosphopantetheine attachment site 5 71 1.9E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DKL56_07695 1d068ca68783392f4d20a93bee58a13b 79 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 77 45.29 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 4.6E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 SUPERFAMILY SSF47917 349 464 9.16E-51 T 14-10-2018 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 56.583 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.1E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Gene3D G3DSA:2.40.10.170 1 77 1.9E-28 T 14-10-2018 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 SUPERFAMILY SSF52540 79 350 2.29E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 SMART SM00382 145 330 1.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 SUPERFAMILY SSF50615 3 77 3.92E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Gene3D G3DSA:3.40.50.300 78 348 6.4E-114 T 14-10-2018 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 2.5E-247 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DKL56_03225 725245a4c803648f72e9aeb71dfc4457 479 Gene3D G3DSA:1.10.1140.10 349 467 3.9E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DKL56_04995 e1e96e624af0d2f5e91c938a77a92ce0 304 SUPERFAMILY SSF53067 3 108 2.92E-14 T 14-10-2018 DKL56_04995 e1e96e624af0d2f5e91c938a77a92ce0 304 SUPERFAMILY SSF53067 113 291 1.94E-34 T 14-10-2018 DKL56_04995 e1e96e624af0d2f5e91c938a77a92ce0 304 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 276 3.8E-22 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DKL56_04995 e1e96e624af0d2f5e91c938a77a92ce0 304 Gene3D G3DSA:3.30.420.40 112 275 1.8E-53 T 14-10-2018 DKL56_04995 e1e96e624af0d2f5e91c938a77a92ce0 304 Gene3D G3DSA:3.30.420.40 7 111 1.8E-53 T 14-10-2018 DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 Gene3D G3DSA:1.10.10.10 1 76 7.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 1.0E-22 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 Pfam PF01380 SIS domain 117 244 1.8E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 SUPERFAMILY SSF53697 93 260 1.81E-35 T 14-10-2018 DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 SUPERFAMILY SSF46689 1 76 2.69E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_02300 ad1e074749a20417b04a05a0df59582a 271 Gene3D G3DSA:3.40.50.10490 87 262 7.4E-38 T 14-10-2018 DKL56_00425 26df9232d565dd7706e90c346bc6b91e 240 Pfam PF13349 Putative adhesin 37 239 1.3E-13 T 14-10-2018 IPR025164 Putative adhesin DKL56_00425 26df9232d565dd7706e90c346bc6b91e 240 Gene3D G3DSA:2.160.20.120 13 225 7.7E-6 T 14-10-2018 DKL56_02535 4e8e3ee4202e48afa378bbc03f1e324e 130 SUPERFAMILY SSF54611 5 126 5.89E-37 T 14-10-2018 IPR035958 SecB-like superfamily DKL56_02535 4e8e3ee4202e48afa378bbc03f1e324e 130 PIRSF PIRSF031568 1 128 2.3E-22 T 14-10-2018 IPR009530 Protein of unknown function DUF1149 DKL56_02535 4e8e3ee4202e48afa378bbc03f1e324e 130 Gene3D G3DSA:3.10.420.10 1 128 4.2E-26 T 14-10-2018 IPR035958 SecB-like superfamily DKL56_02535 4e8e3ee4202e48afa378bbc03f1e324e 130 Pfam PF06619 Protein of unknown function (DUF1149) 5 126 5.2E-35 T 14-10-2018 IPR009530 Protein of unknown function DUF1149 DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 Gene3D G3DSA:3.40.50.11030 211 334 2.0E-25 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 SUPERFAMILY SSF55821 8 206 1.92E-63 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 204 1.3E-66 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 PIRSF PIRSF004930 1 333 4.4E-122 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 Pfam PF01300 Telomere recombination 17 193 8.6E-59 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 Pfam PF03481 Putative GTP-binding controlling metal-binding 195 327 1.3E-22 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DKL56_03185 12d9eec77a8381a30eba1c1fb460709f 334 Gene3D G3DSA:3.90.870.10 1 209 2.8E-82 T 14-10-2018 DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 165 7.2E-51 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 SUPERFAMILY SSF46785 4 80 3.02E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 SUPERFAMILY SSF46785 85 157 8.84E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 Gene3D G3DSA:1.10.10.10 2 77 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 Gene3D G3DSA:1.10.10.10 78 178 5.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 178 3.3E-44 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 PIRSF PIRSF019345 1 201 1.6E-45 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DKL56_03680 35c037f03a70c6b11af8fc607217f939 202 Hamap MF_01804 Segregation and condensation protein B [scpB]. 2 184 30.8 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 Gene3D G3DSA:1.10.490.50 164 254 4.8E-9 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 Gene3D G3DSA:1.10.1660.10 1 144 1.2E-36 T 14-10-2018 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 Pfam PF13411 MerR HTH family regulatory protein 3 70 4.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 SMART SM00422 3 72 1.0E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 SUPERFAMILY SSF46955 3 110 6.96E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 Pfam PF07739 TipAS antibiotic-recognition domain 135 253 2.4E-21 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 SUPERFAMILY SSF89082 163 254 1.83E-16 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 8.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 8.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_01325 4bb5a36cbabb5ecc6aa8e22c4a82624c 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 8.9E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 SUPERFAMILY SSF53822 57 316 1.73E-38 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 SUPERFAMILY SSF47413 1 58 3.75E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 Gene3D G3DSA:3.40.50.2300 61 306 5.7E-45 T 14-10-2018 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 315 2.8E-15 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 Gene3D G3DSA:3.40.50.2300 159 285 5.7E-45 T 14-10-2018 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.1E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 Gene3D G3DSA:1.10.260.40 1 59 5.3E-16 T 14-10-2018 DKL56_06575 f7b5131f792e5c4ad10f2e6cb84ec02f 327 SMART SM00354 1 70 1.8E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 9.1E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 47 69 9.1E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 9.1E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 9.1E-30 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Gene3D G3DSA:3.40.50.620 2 223 3.1E-87 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 SUPERFAMILY SSF52374 5 324 3.56E-106 T 14-10-2018 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 419 43.318 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 SUPERFAMILY SSF55174 323 419 1.44E-18 T 14-10-2018 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Pfam PF01479 S4 domain 356 396 8.7E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Gene3D G3DSA:3.10.290.10 327 421 1.6E-27 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Gene3D G3DSA:1.10.240.10 224 326 3.4E-40 T 14-10-2018 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 Pfam PF00579 tRNA synthetases class I (W and Y) 32 324 1.0E-84 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06740 fb63e053e0f98ebb8254e1c1da09e3a2 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 420 9.0E-128 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 Gene3D G3DSA:3.40.190.120 341 443 2.7E-81 T 14-10-2018 DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 235 499 2.4E-52 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 Gene3D G3DSA:1.10.3720.10 14 207 2.4E-33 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 SUPERFAMILY SSF161098 13 197 5.76E-39 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 SUPERFAMILY SSF53850 234 505 1.57E-64 T 14-10-2018 DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 Gene3D G3DSA:3.40.190.10 245 505 2.7E-81 T 14-10-2018 DKL56_00955 cbc2d6b88ee2426e8ef8db9b23e56fc6 508 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 38 204 3.7E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 SMART SM00490 453 534 8.4E-8 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 SMART SM00487 208 388 1.1E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Pfam PF11907 Domain of unknown function (DUF3427) 673 946 2.4E-77 T 14-10-2018 IPR021835 Protein of unknown function DUF3427 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 SUPERFAMILY SSF52540 258 555 3.94E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Gene3D G3DSA:3.40.50.300 397 572 8.8E-39 T 14-10-2018 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Pfam PF13091 PLD-like domain 67 166 9.1E-13 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Pfam PF04851 Type III restriction enzyme, res subunit 211 361 3.9E-31 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 SUPERFAMILY SSF56024 35 175 2.59E-10 T 14-10-2018 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Gene3D G3DSA:3.30.870.10 30 194 1.9E-28 T 14-10-2018 DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Pfam PF00271 Helicase conserved C-terminal domain 438 533 1.2E-11 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_00335 0fdd99022b4c765a2076ef6f7190065c 949 Gene3D G3DSA:3.40.50.300 195 375 5.5E-45 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 612 36.078 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DKL56_04445 fe298cf1676f4325253680143013283c 616 Pfam PF00012 Hsp70 protein 4 575 3.2E-240 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 Gene3D G3DSA:2.60.34.10 348 477 1.5E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 SUPERFAMILY SSF100920 355 511 2.75E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 Gene3D G3DSA:3.30.420.40 5 347 2.0E-143 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 4.4E-282 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DKL56_04445 fe298cf1676f4325253680143013283c 616 SUPERFAMILY SSF100934 478 575 9.02E-15 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 Gene3D G3DSA:3.90.640.10 199 280 2.0E-143 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 SUPERFAMILY SSF53067 1 158 2.22E-55 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 SUPERFAMILY SSF53067 162 352 2.72E-63 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 Gene3D G3DSA:1.20.1270.10 478 577 1.4E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 Gene3D G3DSA:3.30.420.40 159 338 2.0E-143 T 14-10-2018 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 440 456 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 336 356 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 113 133 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 53 61 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 359 378 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 3 16 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 31 43 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 305 321 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 PRINTS PR00301 70kDa heat shock protein signature 173 183 4.6E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DKL56_04445 fe298cf1676f4325253680143013283c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DKL56_00230 b576fb6ba6d2ccc3d94dfac8600d768e 314 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00230 b576fb6ba6d2ccc3d94dfac8600d768e 314 SUPERFAMILY SSF52540 22 234 4.07E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00230 b576fb6ba6d2ccc3d94dfac8600d768e 314 Pfam PF00005 ABC transporter 31 175 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00230 b576fb6ba6d2ccc3d94dfac8600d768e 314 SMART SM00382 40 229 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00230 b576fb6ba6d2ccc3d94dfac8600d768e 314 Gene3D G3DSA:3.40.50.300 4 244 2.0E-54 T 14-10-2018 DKL56_04815 b20d33a9da3a8228030c843c6f726017 452 Pfam PF13742 OB-fold nucleic acid binding domain 7 102 9.5E-27 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DKL56_04815 b20d33a9da3a8228030c843c6f726017 452 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 443 27.576 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DKL56_04815 b20d33a9da3a8228030c843c6f726017 452 Pfam PF02601 Exonuclease VII, large subunit 125 440 1.4E-95 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DKL56_04815 b20d33a9da3a8228030c843c6f726017 452 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 358 8.1E-131 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 176 229 4.8E-13 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Gene3D G3DSA:1.10.246.80 344 399 8.6E-9 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Gene3D G3DSA:1.20.58.560 250 343 9.8E-9 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 SUPERFAMILY SSF81301 11 144 6.65E-45 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Gene3D G3DSA:3.30.460.10 9 148 3.1E-54 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 SUPERFAMILY SSF81891 146 395 1.15E-48 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 251 392 1.4E-36 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Pfam PF01743 Poly A polymerase head domain 28 147 3.2E-39 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Gene3D G3DSA:1.10.3090.10 149 236 1.4E-29 T 14-10-2018 DKL56_03745 ffd7315767cd796304d0a27085142b07 400 Hamap MF_01263 CCA-adding enzyme [cca]. 8 399 40.727 T 14-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 SMART SM00387 265 377 2.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00970 b33aafce3776930602f5c04605d103e6 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 153 218 6.4E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 SMART SM00388 153 219 5.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 SUPERFAMILY SSF55874 209 375 1.57E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00970 b33aafce3776930602f5c04605d103e6 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 1.5E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 Gene3D G3DSA:1.10.287.130 146 219 1.7E-20 T 14-10-2018 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 266 376 7.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00970 b33aafce3776930602f5c04605d103e6 384 SUPERFAMILY SSF47384 137 217 2.35E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DKL56_00970 b33aafce3776930602f5c04605d103e6 384 Gene3D G3DSA:3.30.565.10 226 376 2.6E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Gene3D G3DSA:1.10.8.60 285 353 1.7E-24 T 14-10-2018 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 SMART SM00760 363 432 1.7E-40 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 SUPERFAMILY SSF48295 352 454 2.38E-34 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 364 432 4.4E-32 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 ProSitePatterns PS01008 DnaA protein signature. 413 432 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 277 7.0E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 152 172 7.0E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 184 198 7.0E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 216 230 7.0E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 413 432 7.0E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 SMART SM00382 151 280 7.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Pfam PF11638 DnaA N-terminal domain 5 59 1.5E-6 T 14-10-2018 IPR024633 DnaA N-terminal domain DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Pfam PF00308 Bacterial dnaA protein 119 335 2.1E-93 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Gene3D G3DSA:3.30.300.180 2 83 6.4E-9 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 454 31.925 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Gene3D G3DSA:3.40.50.300 100 283 6.6E-52 T 14-10-2018 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 SUPERFAMILY SSF52540 118 328 1.64E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 Gene3D G3DSA:1.10.1750.10 354 455 9.7E-37 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DKL56_00005 fa8533631f63042b60eefb6e4ebe5a58 455 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 453 4.1E-169 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 Pfam PF05746 DALR anticodon binding domain 587 676 1.1E-5 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 686 2.6E-217 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 556 4.7E-208 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 26.888 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 2.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 2.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 2.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 2.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 2.6E-35 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04125 52e9e3d408591f35d37118ec3c4c5a6f 689 SUPERFAMILY SSF109604 338 491 1.73E-16 T 14-10-2018 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 559 2.1E-221 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Gene3D G3DSA:1.10.287.380 804 876 3.8E-19 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Gene3D G3DSA:1.10.730.10 6 738 0.0 T 14-10-2018 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 SUPERFAMILY SSF50677 193 343 1.96E-61 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 SUPERFAMILY SSF47323 572 826 1.87E-67 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 SUPERFAMILY SSF46589 811 875 2.04E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 811 876 5.8E-19 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 TIGRFAM TIGR00422 valS: valine--tRNA ligase 6 857 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Gene3D G3DSA:3.90.740.10 177 343 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 876 15.85 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Pfam PF08264 Anticodon-binding domain of tRNA 605 752 2.7E-42 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 SUPERFAMILY SSF52374 3 571 6.07E-140 T 14-10-2018 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 PRINTS PR00986 Valyl-tRNA synthetase signature 473 491 1.9E-32 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 PRINTS PR00986 Valyl-tRNA synthetase signature 347 360 1.9E-32 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 PRINTS PR00986 Valyl-tRNA synthetase signature 232 249 1.9E-32 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 1.9E-32 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 PRINTS PR00986 Valyl-tRNA synthetase signature 441 462 1.9E-32 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DKL56_03305 333167a53f6a157c7aa7b625e8ff746f 879 Gene3D G3DSA:3.40.50.620 24 522 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_04595 e5300c316acf06a7e6f0ca744e48d3d0 90 Gene3D G3DSA:1.10.287.540 13 70 6.3E-15 T 14-10-2018 DKL56_04595 e5300c316acf06a7e6f0ca744e48d3d0 90 Pfam PF05979 Bacterial protein of unknown function (DUF896) 17 79 8.3E-25 T 14-10-2018 IPR009242 Protein of unknown function DUF896 DKL56_04595 e5300c316acf06a7e6f0ca744e48d3d0 90 Hamap MF_01103 UPF0291 protein . 9 71 14.102 T 14-10-2018 IPR009242 Protein of unknown function DUF896 DKL56_04595 e5300c316acf06a7e6f0ca744e48d3d0 90 SUPERFAMILY SSF158221 15 53 5.36E-11 T 14-10-2018 DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 SUPERFAMILY SSF109709 103 209 6.28E-32 T 14-10-2018 DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 SUPERFAMILY SSF110849 20 111 1.96E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 18 186 2.3E-57 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 Pfam PF02195 ParB-like nuclease domain 22 108 2.1E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 Gene3D G3DSA:3.90.1530.30 33 95 1.5E-25 T 14-10-2018 DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 Gene3D G3DSA:1.10.10.2830 96 209 3.4E-37 T 14-10-2018 DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 SMART SM00470 20 109 5.4E-32 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DKL56_00915 f70e8b216ade383ddd51d5b697f406c1 278 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 18 276 8.0E-103 T 14-10-2018 IPR023705 Nucleoid occlusion protein DKL56_05455 e5c4071496c92f1d216695b373d14e98 318 Pfam PF01368 DHH family 17 153 1.4E-11 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_05455 e5c4071496c92f1d216695b373d14e98 318 SUPERFAMILY SSF64182 15 303 6.54E-67 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DKL56_05455 e5c4071496c92f1d216695b373d14e98 318 Gene3D G3DSA:3.90.1640.10 1 195 9.1E-52 T 14-10-2018 DKL56_05455 e5c4071496c92f1d216695b373d14e98 318 Gene3D G3DSA:3.10.310.30 199 318 3.7E-28 T 14-10-2018 DKL56_05015 6c44d0772ef955541bd66e9f23128b50 116 Gene3D G3DSA:1.10.10.10 16 116 1.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05015 6c44d0772ef955541bd66e9f23128b50 116 SUPERFAMILY SSF46785 20 116 3.06E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05015 6c44d0772ef955541bd66e9f23128b50 116 Pfam PF01638 HxlR-like helix-turn-helix 30 116 3.5E-22 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 SUPERFAMILY SSF53254 1 219 2.36E-43 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 SMART SM00855 4 181 2.5E-20 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 Gene3D G3DSA:3.40.50.1240 1 223 4.5E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 133 221 4.4E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 107 4.6E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 PIRSF PIRSF000709 2 95 5.3E-6 T 14-10-2018 DKL56_05775 37e3014177681f8c752e9dc9985cd795 226 PIRSF PIRSF000709 148 198 0.63 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 16 664 6.5E-245 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:2.40.50.140 317 389 2.7E-28 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Hamap MF_01588 DNA ligase [ligA]. 7 669 48.896 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 316 7.3E-113 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SMART SM00532 8 445 2.5E-236 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF12826 Helix-hairpin-helix motif 508 570 5.4E-17 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SMART SM00292 595 670 4.6E-11 T 14-10-2018 IPR001357 BRCT domain DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SUPERFAMILY SSF52113 593 663 3.93E-19 T 14-10-2018 IPR036420 BRCT domain superfamily DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SUPERFAMILY SSF56091 4 314 2.47E-111 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:3.40.50.10190 581 670 4.9E-25 T 14-10-2018 IPR036420 BRCT domain superfamily DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 405 431 2.1E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 118 147 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 319 396 4.4E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 PIRSF PIRSF001604 2 670 9.5E-242 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:3.30.470.90 73 316 2.6E-91 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 664 1.2E-14 T 14-10-2018 IPR001357 BRCT domain DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 329 344 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:1.10.150.20 429 501 1.6E-27 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:1.10.150.20 502 580 2.9E-21 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:1.10.287.610 1 71 3.2E-22 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SUPERFAMILY SSF47781 402 582 2.37E-55 T 14-10-2018 IPR010994 RuvA domain 2-like DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Gene3D G3DSA:2.20.70.80 390 426 5.2E-9 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 Pfam PF14520 Helix-hairpin-helix domain 446 494 4.2E-4 T 14-10-2018 DKL56_02175 26a5cdfc4191bf55e02944fb8531f575 670 SUPERFAMILY SSF50249 315 398 2.74E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Pfam PF13412 Winged helix-turn-helix DNA-binding 9 51 2.5E-5 T 14-10-2018 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 SMART SM00382 100 250 2.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 SUPERFAMILY SSF52540 76 323 4.86E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Gene3D G3DSA:3.40.50.300 68 252 3.2E-39 T 14-10-2018 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 SUPERFAMILY SSF53062 505 618 3.92E-13 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Pfam PF00158 Sigma-54 interaction domain 77 243 2.6E-46 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Gene3D G3DSA:3.40.50.510 500 633 1.4E-28 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Pfam PF03610 PTS system fructose IIA component 506 581 6.1E-5 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 SUPERFAMILY SSF63520 759 849 1.57E-9 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Gene3D G3DSA:1.10.10.10 1 67 1.7E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 SUPERFAMILY SSF46785 7 62 2.7E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01005 57995880ff6f0320c6f5b9664895c7a2 853 Pfam PF00874 PRD domain 767 850 7.9E-10 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 9.0E-25 T 14-10-2018 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 112 125 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 189 202 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 1.0E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 225 5.4E-56 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 Gene3D G3DSA:3.40.50.1000 5 222 1.5E-63 T 14-10-2018 IPR023214 HAD superfamily DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 200 6.3E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 Gene3D G3DSA:1.10.150.240 16 100 1.5E-63 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 194 4.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_00305 562563d3cf5c2d2a443b752800f9c320 235 SUPERFAMILY SSF56784 4 229 5.2E-47 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 Gene3D G3DSA:2.60.410.10 319 407 2.7E-6 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 Gene3D G3DSA:3.40.710.10 34 315 1.2E-76 T 14-10-2018 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 SUPERFAMILY SSF56601 7 315 1.63E-64 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 SUPERFAMILY SSF69189 307 391 3.73E-9 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 37 291 2.6E-71 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 70 81 6.2E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 154 167 6.2E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DKL56_05315 df69d7e395d63829bf180ab9fb3c24bc 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 127 144 6.2E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 SMART SM00345 11 70 8.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 Gene3D G3DSA:3.40.1410.10 79 234 3.9E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 Pfam PF07702 UTRA domain 95 231 5.4E-22 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 Pfam PF08337 Plexin cytoplasmic RasGAP domain 120 216 8.7E-5 T 14-10-2018 IPR013548 Plexin, cytoplasmic RasGAP domain DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 Gene3D G3DSA:1.10.10.10 1 78 7.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 SUPERFAMILY SSF46785 4 80 6.3E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 70 1.0E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 SMART SM00866 94 231 6.1E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01500 01cd15c1192ecd906d1a8d5cb5700d9e 234 SUPERFAMILY SSF64288 58 234 2.2E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_07595 0712e3a456c1821f70a6ab47e2407bb2 296 Pfam PF12541 Protein of unknown function (DUF3737) 3 276 5.5E-117 T 14-10-2018 IPR022208 Protein of unknown function DUF3737 DKL56_07595 0712e3a456c1821f70a6ab47e2407bb2 296 Gene3D G3DSA:2.160.20.10 91 291 1.6E-8 T 14-10-2018 IPR012334 Pectin lyase fold DKL56_07595 0712e3a456c1821f70a6ab47e2407bb2 296 SUPERFAMILY SSF51126 86 238 3.74E-14 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DKL56_07025 778aa2732cc588b07e29c19435fcb3de 137 SUPERFAMILY SSF51182 3 132 8.01E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DKL56_07025 778aa2732cc588b07e29c19435fcb3de 137 Pfam PF07883 Cupin domain 48 109 1.5E-8 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DKL56_07025 778aa2732cc588b07e29c19435fcb3de 137 Gene3D G3DSA:2.60.120.10 1 136 6.9E-46 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DKL56_04130 378d027391c33a5b880d880bcade823a 305 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 285 7.1E-137 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 2.2E-60 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 293 9.0E-144 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 Gene3D G3DSA:1.20.58.180 210 291 4.1E-31 T 14-10-2018 DKL56_04130 378d027391c33a5b880d880bcade823a 305 Gene3D G3DSA:3.30.930.10 1 209 1.0E-101 T 14-10-2018 DKL56_04130 378d027391c33a5b880d880bcade823a 305 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 286 53.268 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DKL56_04130 378d027391c33a5b880d880bcade823a 305 SUPERFAMILY SSF55681 7 285 2.44E-121 T 14-10-2018 DKL56_07030 25ad002ebcb0565b96b0a17f4c9b5207 145 SMART SM00422 7 75 2.8E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_07030 25ad002ebcb0565b96b0a17f4c9b5207 145 Pfam PF13411 MerR HTH family regulatory protein 7 73 1.5E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_07030 25ad002ebcb0565b96b0a17f4c9b5207 145 Gene3D G3DSA:1.10.1660.10 6 139 9.0E-34 T 14-10-2018 DKL56_07030 25ad002ebcb0565b96b0a17f4c9b5207 145 SUPERFAMILY SSF46955 7 119 3.05E-30 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_01880 d20834f9befab0fadbd76d1a84ccce70 188 Gene3D G3DSA:3.40.50.2020 3 188 4.4E-62 T 14-10-2018 DKL56_01880 d20834f9befab0fadbd76d1a84ccce70 188 Pfam PF00156 Phosphoribosyl transferase domain 21 165 5.0E-28 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_01880 d20834f9befab0fadbd76d1a84ccce70 188 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 16 179 3.4E-59 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DKL56_01880 d20834f9befab0fadbd76d1a84ccce70 188 SUPERFAMILY SSF53271 11 184 1.57E-56 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 Gene3D G3DSA:3.20.20.70 1 217 1.7E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 199 4.1E-61 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 2 211 1.2E-66 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DKL56_04740 8d06b76298ba2814d971b4d26f0c3019 217 SUPERFAMILY SSF51366 2 211 1.16E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 Gene3D G3DSA:3.40.390.10 18 648 4.2E-158 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 Gene3D G3DSA:1.10.1380.10 48 443 4.2E-158 T 14-10-2018 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 Pfam PF05649 Peptidase family M13 23 399 5.1E-63 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 SUPERFAMILY SSF55486 16 648 2.31E-162 T 14-10-2018 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 Pfam PF01431 Peptidase family M13 456 645 1.3E-51 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 557 568 6.4E-18 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 466 478 6.4E-18 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 448 460 6.4E-18 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_00165 e9e8c05edf27d6885175986c15b97e85 648 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 487 503 6.4E-18 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 SUPERFAMILY SSF51905 16 321 5.87E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 Hamap MF_01685 Ferredoxin--NADP reductase. 17 333 34.299 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 76 86 1.1E-21 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 156 180 1.1E-21 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 118 126 1.1E-21 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 19 41 1.1E-21 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.1E-21 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 19 297 2.6E-28 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 SUPERFAMILY SSF51905 146 254 2.02E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 Gene3D G3DSA:3.50.50.60 19 313 2.2E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 245 261 3.0E-20 T 14-10-2018 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 3.0E-20 T 14-10-2018 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 117 135 3.0E-20 T 14-10-2018 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 3.0E-20 T 14-10-2018 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 3.0E-20 T 14-10-2018 DKL56_01680 b3595d0a89f17e879c298e0a23e28d06 333 Gene3D G3DSA:3.50.50.60 133 252 2.2E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 SUPERFAMILY SSF51735 49 292 1.98E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 Gene3D G3DSA:3.40.50.720 3 293 4.4E-84 T 14-10-2018 DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 187 215 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 60 291 9.0E-58 T 14-10-2018 DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 52 69 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 200 219 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 238 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 256 276 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_07565 26dcf0e33d403c71cd8bc3dfa3cafebd 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 139 1.8E-32 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_05905 e76a2713330c210f710574e60beeceab 649 Pfam PF05043 Mga helix-turn-helix domain 107 170 4.8E-5 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DKL56_05905 e76a2713330c210f710574e60beeceab 649 Gene3D G3DSA:1.10.1790.10 202 287 1.1E-6 T 14-10-2018 DKL56_05905 e76a2713330c210f710574e60beeceab 649 Gene3D G3DSA:1.10.1790.10 302 401 3.3E-11 T 14-10-2018 DKL56_05905 e76a2713330c210f710574e60beeceab 649 SUPERFAMILY SSF46785 10 55 9.72E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05905 e76a2713330c210f710574e60beeceab 649 Gene3D G3DSA:3.40.930.10 500 643 1.2E-22 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_05905 e76a2713330c210f710574e60beeceab 649 Pfam PF00874 PRD domain 203 284 3.9E-8 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_05905 e76a2713330c210f710574e60beeceab 649 Pfam PF00874 PRD domain 311 398 7.9E-12 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_05905 e76a2713330c210f710574e60beeceab 649 SUPERFAMILY SSF63520 300 403 2.62E-14 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_05905 e76a2713330c210f710574e60beeceab 649 SUPERFAMILY SSF55804 502 643 1.12E-27 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_05905 e76a2713330c210f710574e60beeceab 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 505 642 5.8E-22 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_05905 e76a2713330c210f710574e60beeceab 649 Gene3D G3DSA:1.10.10.10 6 201 1.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05905 e76a2713330c210f710574e60beeceab 649 SUPERFAMILY SSF63520 199 285 1.57E-8 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_05905 e76a2713330c210f710574e60beeceab 649 Pfam PF08279 HTH domain 17 71 7.7E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DKL56_05960 bfce11384aeac0638f5bc33381ed5600 104 Pfam PF03551 Transcriptional regulator PadR-like family 14 82 1.4E-18 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DKL56_05960 bfce11384aeac0638f5bc33381ed5600 104 SUPERFAMILY SSF46785 10 100 1.91E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05960 bfce11384aeac0638f5bc33381ed5600 104 Gene3D G3DSA:1.10.10.10 1 103 4.4E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 22 289 5.6E-78 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 22 292 50.727 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 Gene3D G3DSA:3.40.50.150 3 223 1.0E-60 T 14-10-2018 DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 54 81 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 SUPERFAMILY SSF53335 19 292 2.11E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 SMART SM00650 38 221 2.9E-66 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 23 290 1.1E-59 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DKL56_06610 d5ad3f32642d873eb2c7dcb656b12077 296 Gene3D G3DSA:1.10.8.100 224 294 2.7E-18 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 Gene3D G3DSA:3.40.50.300 86 256 7.7E-19 T 14-10-2018 DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 Pfam PF00271 Helicase conserved C-terminal domain 294 397 7.8E-14 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 Pfam PF04851 Type III restriction enzyme, res subunit 93 239 8.8E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 SMART SM00487 88 270 2.3E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 SMART SM00490 312 397 1.7E-8 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 SUPERFAMILY SSF52540 110 410 1.27E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02600 f099b93aabfd685a28d1d50940cf6c28 427 Gene3D G3DSA:3.40.50.300 274 427 4.7E-22 T 14-10-2018 DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 Gene3D G3DSA:3.40.50.300 3 321 4.2E-79 T 14-10-2018 DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 SMART SM00382 41 233 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 SUPERFAMILY SSF52540 5 255 8.23E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 282 2.7E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_04695 6b769a0ca7b737c6a76bc572cbc76232 325 Pfam PF00005 ABC transporter 33 184 1.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 SMART SM00866 88 228 8.0E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 9.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 SMART SM00345 9 66 2.3E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 SUPERFAMILY SSF46785 3 69 1.74E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 Gene3D G3DSA:3.40.1410.10 73 235 2.4E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 SUPERFAMILY SSF64288 54 231 2.0E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 Pfam PF07702 UTRA domain 90 227 9.0E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01385 8c256f6d18d667d47fd96d6585cddc51 238 Gene3D G3DSA:1.10.10.10 4 69 1.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 SMART SM00448 3 116 5.0E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 Pfam PF00072 Response regulator receiver domain 5 117 2.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 SMART SM00862 163 238 8.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 Gene3D G3DSA:3.40.50.2300 2 142 1.2E-36 T 14-10-2018 DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 Gene3D G3DSA:1.10.10.10 143 243 5.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 168 238 5.2E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 SUPERFAMILY SSF52172 2 128 7.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily DKL56_03030 fcc0a59d1ce193261fa33311289f0dda 243 SUPERFAMILY SSF46894 148 239 3.12E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 360 370 - T 14-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 Pfam PF03051 Peptidase C1-like family 5 437 4.7E-189 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 64 75 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 PIRSF PIRSF005700 1 438 4.1E-163 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 Gene3D G3DSA:3.90.70.10 53 438 2.4E-149 T 14-10-2018 DKL56_06680 0ae217398ae4583e8e719729e86678ea 438 SUPERFAMILY SSF54001 2 437 2.2E-125 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 1.0E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.0E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 1.0E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 120 6.3E-42 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 Gene3D G3DSA:1.10.1200.120 1 123 1.3E-42 T 14-10-2018 IPR036019 Gated mechanosensitive channel DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 SUPERFAMILY SSF81330 11 116 1.01E-34 T 14-10-2018 IPR036019 Gated mechanosensitive channel DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 120 3.7E-45 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L DKL56_01600 6151746e7e58e2e3a005f931e70a270d 124 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 121 23.376 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 DKL56_02705 8dbf66f5b3db797ac5bee576930b3f01 508 Pfam PF13457 SH3-like domain 39 101 2.6E-5 T 14-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 DKL56_02705 8dbf66f5b3db797ac5bee576930b3f01 508 SUPERFAMILY SSF50969 290 494 9.42E-5 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DKL56_02705 8dbf66f5b3db797ac5bee576930b3f01 508 Pfam PF07523 Bacterial Ig-like domain (group 3) 124 179 3.6E-7 T 14-10-2018 IPR022038 Bacterial Ig-like domain DKL56_02705 8dbf66f5b3db797ac5bee576930b3f01 508 SUPERFAMILY SSF82057 35 104 2.47E-5 T 14-10-2018 DKL56_02695 bd99b301e36c9431069218441dea9afa 153 Pfam PF01475 Ferric uptake regulator family 18 122 8.3E-23 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DKL56_02695 bd99b301e36c9431069218441dea9afa 153 Gene3D G3DSA:1.10.10.10 4 88 3.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02695 bd99b301e36c9431069218441dea9afa 153 SUPERFAMILY SSF46785 10 143 7.74E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02695 bd99b301e36c9431069218441dea9afa 153 Gene3D G3DSA:3.30.1490.190 90 153 3.9E-19 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 Pfam PF00206 Lyase 6 285 1.1E-64 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 SMART SM00998 349 429 4.0E-33 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 SUPERFAMILY SSF48557 3 427 2.83E-129 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 Gene3D G3DSA:1.20.200.10 93 348 3.3E-92 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 Gene3D G3DSA:1.10.40.30 349 431 1.6E-27 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.2E-20 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.5E-159 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.2E-7 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.2E-7 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.2E-7 T 14-10-2018 DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 Gene3D G3DSA:1.10.275.10 1 92 4.1E-36 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_07385 51b2eb4a7440eb15646c525bbe94adbd 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.4E-24 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 Gene3D G3DSA:3.40.50.2300 164 290 8.6E-59 T 14-10-2018 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 SUPERFAMILY SSF47413 6 63 2.94E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 SUPERFAMILY SSF53822 65 332 1.26E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 Pfam PF13377 Periplasmic binding protein-like domain 175 330 1.0E-24 T 14-10-2018 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 7.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 SMART SM00354 5 75 2.7E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 Gene3D G3DSA:3.40.50.2300 64 306 8.6E-59 T 14-10-2018 DKL56_01640 85ff892e7398a681e017ef7d422320e0 333 Gene3D G3DSA:1.10.260.40 5 63 9.9E-25 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 43.412 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DKL56_05725 271d774264dc28b39896538ca946cb77 458 SUPERFAMILY SSF54211 256 457 5.31E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_05725 271d774264dc28b39896538ca946cb77 458 Gene3D G3DSA:3.30.230.10 323 458 1.2E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_05725 271d774264dc28b39896538ca946cb77 458 Gene3D G3DSA:3.40.50.300 64 287 2.6E-45 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.4E-185 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DKL56_05725 271d774264dc28b39896538ca946cb77 458 SUPERFAMILY SSF52540 70 292 1.21E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 84 112 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 249 275 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 10 34 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 323 346 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 214 242 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 175 199 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 PRINTS PR01874 DNA repair protein radA signature 125 142 4.1E-82 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 SMART SM00382 92 245 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05725 271d774264dc28b39896538ca946cb77 458 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 431 4.7E-8 T 14-10-2018 DKL56_05725 271d774264dc28b39896538ca946cb77 458 Pfam PF13481 AAA domain 70 223 2.6E-16 T 14-10-2018 DKL56_03920 a9379a2903626212f3c1005a56559327 302 SUPERFAMILY SSF55120 73 298 2.88E-78 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03920 a9379a2903626212f3c1005a56559327 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 298 2.3E-98 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03920 a9379a2903626212f3c1005a56559327 302 Pfam PF01479 S4 domain 14 60 3.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03920 a9379a2903626212f3c1005a56559327 302 Pfam PF00849 RNA pseudouridylate synthase 87 240 7.7E-38 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03920 a9379a2903626212f3c1005a56559327 302 Gene3D G3DSA:3.30.2350.10 70 287 5.7E-75 T 14-10-2018 DKL56_03920 a9379a2903626212f3c1005a56559327 302 Gene3D G3DSA:3.10.290.10 4 66 2.9E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_03920 a9379a2903626212f3c1005a56559327 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03920 a9379a2903626212f3c1005a56559327 302 SMART SM00363 14 78 1.2E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03920 a9379a2903626212f3c1005a56559327 302 SUPERFAMILY SSF55174 14 100 2.75E-12 T 14-10-2018 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 SMART SM00382 345 528 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 Gene3D G3DSA:1.20.1560.10 5 300 6.2E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 Pfam PF00005 ABC transporter 340 482 3.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 349 362 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 Gene3D G3DSA:3.40.50.300 301 531 6.8E-51 T 14-10-2018 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 Pfam PF00664 ABC transporter transmembrane region 18 281 4.2E-14 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 SUPERFAMILY SSF52540 319 511 1.12E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06525 b494fcbac87dd39e59f560472b083ce9 532 SUPERFAMILY SSF90123 6 292 1.23E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 Pfam PF00390 Malic enzyme, N-terminal domain 70 251 1.2E-66 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 Gene3D G3DSA:3.40.50.10380 4 258 3.5E-94 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 Gene3D G3DSA:3.40.50.720 259 546 1.1E-98 T 14-10-2018 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 75 99 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 257 273 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 288 304 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 137 166 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 395 411 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 232 250 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PRINTS PR00072 Malic enzyme signature 173 195 1.0E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 Pfam PF03949 Malic enzyme, NAD binding domain 261 517 3.7E-96 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 PIRSF PIRSF000106 1 547 1.4E-207 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 ProSitePatterns PS00331 Malic enzymes signature. 257 273 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 SUPERFAMILY SSF51735 261 542 1.14E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 SMART SM01274 69 251 1.3E-85 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 SUPERFAMILY SSF53223 5 260 7.19E-95 T 14-10-2018 DKL56_01220 5856719c1d1a7f5c3b8dee4b4149f44b 547 SMART SM00919 261 517 9.1E-111 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 9 124 9.2E-58 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 PIRSF PIRSF002131 1 127 8.6E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 33.215 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 Gene3D G3DSA:3.30.420.80 2 127 1.3E-52 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 Pfam PF00411 Ribosomal protein S11 17 126 7.7E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site DKL56_06025 4e74ec796d663b5de8344baec7a509d2 127 SUPERFAMILY SSF53137 12 127 7.19E-48 T 14-10-2018 DKL56_06855 25f548e81cc9de44782b8c0dfa8ad3a9 204 SUPERFAMILY SSF140931 30 173 1.31E-23 T 14-10-2018 IPR036597 Fido-like domain superfamily DKL56_06855 25f548e81cc9de44782b8c0dfa8ad3a9 204 Gene3D G3DSA:1.10.3290.10 1 204 3.1E-38 T 14-10-2018 IPR036597 Fido-like domain superfamily DKL56_06855 25f548e81cc9de44782b8c0dfa8ad3a9 204 Pfam PF02661 Fic/DOC family 52 144 1.4E-10 T 14-10-2018 IPR003812 Fido domain DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 Gene3D G3DSA:3.30.230.10 2 209 7.8E-70 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 PRINTS PR00959 Mevalonate kinase family signature 312 329 2.7E-6 T 14-10-2018 DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 PRINTS PR00959 Mevalonate kinase family signature 6 30 2.7E-6 T 14-10-2018 DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 PRINTS PR00959 Mevalonate kinase family signature 110 132 2.7E-6 T 14-10-2018 DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 SUPERFAMILY SSF54211 2 228 5.46E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 Gene3D G3DSA:3.30.70.890 213 351 4.3E-44 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 SUPERFAMILY SSF55060 211 353 4.32E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 Pfam PF00288 GHMP kinases N terminal domain 101 172 1.1E-17 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 Pfam PF08544 GHMP kinases C terminal 273 344 7.7E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DKL56_04020 c72314dff92b52f2166d6bd9d7d3f9b7 360 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 2 354 2.3E-131 T 14-10-2018 IPR005917 Phosphomevalonate kinase, bacteria KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922 DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 211 4.1E-51 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 SUPERFAMILY SSF109755 4 219 6.91E-48 T 14-10-2018 DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 Pfam PF01895 PhoU domain 17 101 6.4E-15 T 14-10-2018 IPR026022 PhoU domain DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 Pfam PF01895 PhoU domain 120 205 3.8E-12 T 14-10-2018 IPR026022 PhoU domain DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 PIRSF PIRSF003107 1 219 2.1E-51 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DKL56_05640 a74596e70ac9dbc2b3038352156fe9f2 243 Gene3D G3DSA:1.20.58.220 1 216 1.3E-53 T 14-10-2018 IPR038078 PhoU-like domain superfamily DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 Gene3D G3DSA:1.20.1050.90 119 312 3.8E-103 T 14-10-2018 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 Gene3D G3DSA:3.40.50.300 9 347 3.8E-103 T 14-10-2018 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 1.6E-114 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 381 94.14 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 SUPERFAMILY SSF52540 1 352 1.58E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 ProSitePatterns PS00618 RecF protein signature 2. 313 331 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DKL56_00020 13e0f87e473cdfe9f70e89621b62b685 381 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 346 1.5E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Gene3D G3DSA:1.10.601.10 100 134 3.1E-12 T 14-10-2018 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Gene3D G3DSA:1.10.601.10 135 212 5.5E-52 T 14-10-2018 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 2.8E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 SUPERFAMILY SSF88659 213 286 4.67E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Gene3D G3DSA:1.10.10.10 213 288 2.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Pfam PF04542 Sigma-70 region 2 140 209 6.2E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Pfam PF04539 Sigma-70 region 3 219 295 7.2E-31 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 1.1E-18 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 SUPERFAMILY SSF88659 270 372 2.43E-30 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 SUPERFAMILY SSF88946 101 210 3.92E-55 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 136 372 2.6E-124 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 136 361 9.6E-42 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Pfam PF04545 Sigma-70, region 4 308 361 5.1E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Pfam PF03979 Sigma-70 factor, region 1.1 19 88 8.4E-6 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 9 373 34.609 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DKL56_04115 9d0f2f5b35d9ab58aaddf29c95cd07c8 373 Gene3D G3DSA:1.10.10.10 290 373 6.4E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 4 301 3.0E-97 T 14-10-2018 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 Pfam PF00288 GHMP kinases N terminal domain 87 144 7.3E-7 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 Gene3D G3DSA:3.30.70.890 177 310 1.1E-47 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 SUPERFAMILY SSF54211 1 162 2.05E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 Gene3D G3DSA:3.30.230.10 1 175 2.0E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 PIRSF PIRSF015950 1 319 3.4E-116 T 14-10-2018 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 DKL56_04015 7c8aab60b69da4010490240c5ff2354f 319 SUPERFAMILY SSF55060 170 311 4.32E-41 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 274 4.4E-53 T 14-10-2018 IPR003797 DegV DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 SUPERFAMILY SSF82549 4 274 4.71E-57 T 14-10-2018 DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 Gene3D G3DSA:3.30.1180.10 150 276 4.3E-43 T 14-10-2018 DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 Gene3D G3DSA:3.40.50.10440 5 136 2.6E-33 T 14-10-2018 DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 274 1.9E-54 T 14-10-2018 IPR003797 DegV DKL56_04405 57f0dafc110e48cd01ecf7f5e8f19ae9 277 Gene3D G3DSA:2.20.28.50 24 61 2.6E-33 T 14-10-2018 DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 129 738 1.5E-73 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 240 399 1.6E-15 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 SUPERFAMILY SSF56281 500 745 1.13E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 Gene3D G3DSA:3.60.15.10 498 750 8.5E-56 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 SMART SM00849 508 710 5.3E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 Pfam PF03772 Competence protein 218 464 2.0E-31 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DKL56_03550 e3812c6b51fe67bc9460d87314724e84 762 Pfam PF00753 Metallo-beta-lactamase superfamily 506 702 6.6E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_01030 9fe8695f637153ab611b18b216739056 717 SUPERFAMILY SSF48208 239 624 1.47E-29 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DKL56_01030 9fe8695f637153ab611b18b216739056 717 Gene3D G3DSA:1.50.10.10 283 478 1.3E-12 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 Pfam PF00152 tRNA synthetases class II (D, K and N) 113 426 2.9E-76 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 SUPERFAMILY SSF50249 11 104 2.15E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 SUPERFAMILY SSF55681 99 431 1.06E-92 T 14-10-2018 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 7 431 4.6E-148 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 182 194 1.5E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 347 363 1.5E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 387 401 1.5E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 PRINTS PR01042 Aspartyl-tRNA synthetase signature 198 211 1.5E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 Gene3D G3DSA:3.30.930.10 103 432 1.7E-109 T 14-10-2018 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 432 40.629 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 Gene3D G3DSA:2.40.50.140 5 102 2.6E-20 T 14-10-2018 DKL56_03985 8bb9369c3dbf7eef401bb0d0fc37d6f5 432 Pfam PF01336 OB-fold nucleic acid binding domain 19 96 1.1E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DKL56_00725 3c64bf223c831ec064c4444c163371ec 128 SUPERFAMILY SSF88697 22 90 2.98E-6 T 14-10-2018 IPR015947 PUA-like superfamily DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 89 1.9E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Pfam PF00589 Phage integrase family 113 284 2.0E-49 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 299 53.485 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Gene3D G3DSA:1.10.150.130 4 98 3.0E-23 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Gene3D G3DSA:1.10.443.10 111 293 8.2E-67 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 299 1.2E-114 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 SUPERFAMILY SSF56349 6 291 1.03E-60 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DKL56_03665 a319ac5eb809624fda179688914df7ce 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 299 56.302 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 Gene3D G3DSA:3.40.50.1820 5 295 5.3E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 4 294 8.4E-118 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 PIRSF PIRSF005539 1 302 8.9E-99 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 Pfam PF00561 alpha/beta hydrolase fold 27 157 1.6E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 SUPERFAMILY SSF53474 9 294 2.41E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 28 36 1.2E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 58 69 1.2E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 1.2E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DKL56_05260 e779f497f62f92ec2b9ec642adf677b1 304 Pfam PF08386 TAP-like protein 237 295 1.7E-4 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SUPERFAMILY SSF50249 7 120 1.49E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Gene3D G3DSA:2.40.50.140 277 362 7.2E-31 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Gene3D G3DSA:2.40.50.140 192 276 4.0E-31 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SMART SM00316 19 94 1.0E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SMART SM00316 110 177 3.4E-13 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SMART SM00316 196 266 1.8E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SMART SM00316 281 352 3.3E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SUPERFAMILY SSF50249 109 190 5.27E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Pfam PF00575 S1 RNA binding domain 197 266 8.7E-25 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Pfam PF00575 S1 RNA binding domain 280 352 1.4E-23 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Pfam PF00575 S1 RNA binding domain 19 78 5.7E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Pfam PF00575 S1 RNA binding domain 109 177 1.3E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SUPERFAMILY SSF50249 197 283 9.29E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Gene3D G3DSA:2.40.50.140 107 190 1.5E-13 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 Gene3D G3DSA:2.40.50.140 5 106 2.2E-10 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 21 39 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 115 131 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 132 149 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 296 315 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 161 181 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 335 353 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 218 239 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 PRINTS PR00681 Ribosomal protein S1 signature 91 110 8.7E-47 T 14-10-2018 DKL56_03715 a4bf08c7d3f0371aab7e99f644a34060 402 SUPERFAMILY SSF50249 271 354 1.17E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 Gene3D G3DSA:3.40.50.150 7 390 1.5E-79 T 14-10-2018 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 394 3.0E-51 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 SUPERFAMILY SSF53335 2 396 9.97E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 Gene3D G3DSA:3.90.120.10 188 385 1.5E-79 T 14-10-2018 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 96 108 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 395 8.3E-57 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 139 153 1.1E-16 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 192 205 1.1E-16 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02230 3d2081c95a76ac6abb196b369dc9141d 412 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 1.1E-16 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_03695 436b9ca66bc3446e8ec51c0ebe8a1f36 283 Gene3D G3DSA:3.40.50.720 4 266 2.5E-63 T 14-10-2018 DKL56_03695 436b9ca66bc3446e8ec51c0ebe8a1f36 283 Pfam PF13460 NAD(P)H-binding 8 151 2.9E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain DKL56_03695 436b9ca66bc3446e8ec51c0ebe8a1f36 283 SUPERFAMILY SSF51735 4 244 1.41E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_03695 436b9ca66bc3446e8ec51c0ebe8a1f36 283 Gene3D G3DSA:3.90.25.10 139 267 2.5E-63 T 14-10-2018 DKL56_07410 473a31f8260a829bff1c9002db3ea183 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 17 274 2.1E-80 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 Gene3D G3DSA:3.40.50.620 7 144 5.0E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 Pfam PF00582 Universal stress protein family 5 144 3.6E-36 T 14-10-2018 IPR006016 UspA DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 PRINTS PR01438 Universal stress protein signature 104 116 1.0E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 PRINTS PR01438 Universal stress protein signature 122 144 1.0E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 PRINTS PR01438 Universal stress protein signature 5 23 1.0E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 SUPERFAMILY SSF52402 5 144 1.09E-33 T 14-10-2018 DKL56_03260 29fe1e02b9d1eefd67fafc77e9032dd6 150 PIRSF PIRSF006276 1 147 5.5E-20 T 14-10-2018 IPR006015 Universal stress protein A DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 Gene3D G3DSA:3.40.50.720 6 341 5.8E-129 T 14-10-2018 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 SUPERFAMILY SSF51735 6 156 2.37E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 119 1.7E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 PIRSF PIRSF000148 3 349 2.3E-115 T 14-10-2018 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 SUPERFAMILY SSF55347 128 331 4.56E-66 T 14-10-2018 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 344 35.643 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 Gene3D G3DSA:3.30.360.10 127 327 5.8E-129 T 14-10-2018 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 SMART SM00859 5 120 1.7E-39 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 329 8.8E-48 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DKL56_07485 70a402d229ff1aaebd80b470cf0f303e 353 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 345 4.3E-129 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DKL56_02765 55f623a6c80e1bdf27932dc36e12c7e8 191 Gene3D G3DSA:3.40.50.1110 2 190 3.1E-32 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DKL56_02765 55f623a6c80e1bdf27932dc36e12c7e8 191 SUPERFAMILY SSF52266 2 187 3.21E-30 T 14-10-2018 DKL56_02765 55f623a6c80e1bdf27932dc36e12c7e8 191 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 178 6.3E-15 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain DKL56_01175 1294c5a1a359cd5db7cf43acaebdacb3 309 SUPERFAMILY SSF56601 75 308 6.93E-19 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_01175 1294c5a1a359cd5db7cf43acaebdacb3 309 Pfam PF13354 Beta-lactamase enzyme family 96 289 1.8E-16 T 14-10-2018 DKL56_01175 1294c5a1a359cd5db7cf43acaebdacb3 309 Gene3D G3DSA:3.40.710.10 72 308 1.4E-23 T 14-10-2018 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 SUPERFAMILY SSF52141 5 222 5.01E-87 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 SMART SM00987 51 210 1.3E-31 T 14-10-2018 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 SMART SM00986 51 210 1.3E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 221 38.089 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 213 1.3E-72 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 Gene3D G3DSA:3.40.470.10 1 229 1.9E-92 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 Pfam PF03167 Uracil DNA glycosylase superfamily 55 208 3.3E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_02800 423814f716b1f9c7a30c59dccada3966 232 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 367 2.3E-82 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 PIRSF PIRSF005962 2 379 3.5E-96 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 Pfam PF01546 Peptidase family M20/M25/M40 71 375 6.5E-26 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 Gene3D G3DSA:3.30.70.360 178 293 9.5E-109 T 14-10-2018 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 Pfam PF07687 Peptidase dimerisation domain 179 272 3.2E-7 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 4 378 62.142 T 14-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 SUPERFAMILY SSF53187 5 376 2.12E-61 T 14-10-2018 DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 SUPERFAMILY SSF55031 179 287 3.79E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DKL56_07505 8dbffcde130f9939f735e8f98939234f 379 Gene3D G3DSA:3.40.630.10 7 364 9.5E-109 T 14-10-2018 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 Pfam PF00365 Phosphofructokinase 3 275 6.1E-104 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 Gene3D G3DSA:3.40.50.450 3 281 5.8E-113 T 14-10-2018 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 44.52 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 Gene3D G3DSA:3.40.50.460 139 251 5.8E-113 T 14-10-2018 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 1.9E-121 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 SUPERFAMILY SSF53784 1 313 1.44E-110 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 6.2E-77 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DKL56_03650 ef10dd61e38492e5d55d3e3625a8b6bb 319 PIRSF PIRSF000532 1 319 2.4E-116 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Hamap MF_00123 Arginine--tRNA ligase [argS]. 1 561 25.552 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 SMART SM01016 1 82 1.9E-21 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 SUPERFAMILY SSF55190 3 103 2.75E-25 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Pfam PF05746 DALR anticodon binding domain 446 561 4.2E-30 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 SUPERFAMILY SSF52374 106 440 1.61E-95 T 14-10-2018 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Gene3D G3DSA:1.10.730.10 440 561 2.6E-33 T 14-10-2018 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Gene3D G3DSA:3.30.1360.70 2 103 1.7E-29 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 11 561 5.1E-150 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 SUPERFAMILY SSF47323 440 561 9.81E-31 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Gene3D G3DSA:3.40.50.620 107 439 2.7E-120 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 111 126 8.1E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 150 163 8.1E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 293 314 8.1E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 PRINTS PR01038 Arginyl-tRNA synthetase signature 126 142 8.1E-19 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 SMART SM00836 446 561 1.6E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Pfam PF00750 tRNA synthetases class I (R) 92 431 9.0E-92 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DKL56_05300 4089f36732380a0dc9f90717738ac57e 561 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 12 81 2.3E-16 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 Gene3D G3DSA:3.70.10.10 141 373 4.4E-118 T 14-10-2018 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 SUPERFAMILY SSF55979 1 123 9.87E-26 T 14-10-2018 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 Pfam PF02767 DNA polymerase III beta subunit, central domain 133 247 4.4E-31 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 SMART SM00480 17 371 4.5E-129 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 Gene3D G3DSA:3.10.150.10 1 246 4.4E-118 T 14-10-2018 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 SUPERFAMILY SSF55979 249 375 2.3E-25 T 14-10-2018 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 375 4.9E-100 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 SUPERFAMILY SSF55979 129 247 1.91E-24 T 14-10-2018 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 PIRSF PIRSF000804 1 376 7.1E-113 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 374 6.8E-25 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DKL56_00010 31bb87910467e5bc8dfd7d32ee7c334b 376 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 123 7.1E-33 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 SMART SM01061 2 59 2.2E-17 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Gene3D G3DSA:1.10.1790.10 66 167 2.1E-29 T 14-10-2018 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Pfam PF00874 PRD domain 196 271 6.0E-14 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Pfam PF00874 PRD domain 76 162 3.8E-19 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Gene3D G3DSA:1.10.1790.10 168 274 2.3E-24 T 14-10-2018 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 SUPERFAMILY SSF63520 58 167 6.41E-26 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Gene3D G3DSA:2.30.24.10 1 65 2.3E-14 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 Pfam PF03123 CAT RNA binding domain 3 56 1.1E-15 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 SUPERFAMILY SSF63520 171 272 1.44E-20 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_03160 125bd2a0cfe416f8f769b726cdfb09a0 275 SUPERFAMILY SSF50151 3 54 6.02E-13 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 SMART SM01192 139 422 1.1E-167 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 Pfam PF03952 Enolase, N-terminal domain 6 135 3.2E-56 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 108 124 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 161 174 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 364 381 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 312 323 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 39 53 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PRINTS PR00148 Enolase signature 335 349 7.3E-39 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 Hamap MF_00318 Enolase [eno]. 4 412 40.441 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 SUPERFAMILY SSF51604 140 419 3.82E-105 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 ProSitePatterns PS00164 Enolase signature. 335 348 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 SUPERFAMILY SSF54826 5 137 1.62E-52 T 14-10-2018 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 Gene3D G3DSA:3.20.20.120 129 424 3.2E-119 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 Gene3D G3DSA:3.30.390.10 3 127 9.0E-52 T 14-10-2018 IPR029017 Enolase-like, N-terminal DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 SMART SM01193 6 135 1.7E-84 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 417 5.2E-103 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 6 416 2.4E-172 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_04410 ae88644f748beb34f97212c7ae2972f8 428 PIRSF PIRSF001400 2 423 3.3E-178 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DKL56_01295 543b684851791e61c50043629b5f7657 330 Gene3D G3DSA:3.40.50.720 3 252 6.8E-123 T 14-10-2018 DKL56_01295 543b684851791e61c50043629b5f7657 330 Gene3D G3DSA:3.90.25.10 173 306 6.8E-123 T 14-10-2018 DKL56_01295 543b684851791e61c50043629b5f7657 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 1.2E-57 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DKL56_01295 543b684851791e61c50043629b5f7657 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 326 2.5E-124 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DKL56_01295 543b684851791e61c50043629b5f7657 330 SUPERFAMILY SSF51735 1 328 2.13E-98 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07340 1c4717b42d5296b84fb2208b101cea83 257 SUPERFAMILY SSF52799 8 256 2.86E-49 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_07340 1c4717b42d5296b84fb2208b101cea83 257 Pfam PF13350 Tyrosine phosphatase family 8 257 4.2E-60 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DKL56_07340 1c4717b42d5296b84fb2208b101cea83 257 Gene3D G3DSA:3.90.190.10 8 256 8.2E-55 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_06075 3467ea00347d07c24487a406a35c143f 176 PIRSF PIRSF002162 1 175 2.9E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 SUPERFAMILY SSF56053 81 175 7.56E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 174 7.8E-72 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 Pfam PF00347 Ribosomal protein L6 88 162 7.9E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 Pfam PF00347 Ribosomal protein L6 11 78 2.7E-13 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 SUPERFAMILY SSF56053 1 80 1.7E-20 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 152 160 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 PRINTS PR00059 Ribosomal protein L6 signature 139 160 5.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 PRINTS PR00059 Ribosomal protein L6 signature 69 94 5.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 PRINTS PR00059 Ribosomal protein L6 signature 97 113 5.6E-32 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 Gene3D G3DSA:3.90.930.12 81 176 6.6E-41 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 Gene3D G3DSA:3.90.930.12 1 80 7.2E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06075 3467ea00347d07c24487a406a35c143f 176 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 174 36.081 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 Pfam PF07690 Major Facilitator Superfamily 13 398 2.1E-58 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 295 319 1.1E-8 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 122 1.1E-8 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 1.1E-8 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 1.1E-8 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 PRINTS PR01036 Tetracycline resistance protein TetB signature 259 284 1.1E-8 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 Gene3D G3DSA:1.20.1250.20 219 418 2.8E-17 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 Gene3D G3DSA:1.20.1720.10 9 218 5.5E-58 T 14-10-2018 DKL56_05365 e42920bb327ca1ef7fa0be2518f862d7 485 SUPERFAMILY SSF103473 8 480 2.49E-72 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_02210 ed76c4da9a68c63c5653d636f9db7913 237 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 228 1.3E-42 T 14-10-2018 IPR006214 Bax inhibitor 1-related DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 SUPERFAMILY SSF52540 20 253 2.66E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 SMART SM00382 46 255 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 266 5.0E-111 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 Gene3D G3DSA:3.40.50.300 16 263 3.6E-60 T 14-10-2018 DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05650 be3da51593ecf65204a3bc14e5c5c408 266 Pfam PF00005 ABC transporter 39 190 8.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 20.101 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 SUPERFAMILY SSF47323 646 916 5.98E-76 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 SUPERFAMILY SSF50677 201 395 1.26E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Gene3D G3DSA:1.10.730.20 634 917 7.3E-94 T 14-10-2018 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Gene3D G3DSA:3.90.740.10 193 400 3.9E-257 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 634 8.3E-210 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 SUPERFAMILY SSF52374 1 642 9.1E-153 T 14-10-2018 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 834 5.9E-296 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Gene3D G3DSA:3.40.50.620 24 623 3.9E-257 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Pfam PF06827 Zinc finger found in FPG and IleRS 885 913 1.8E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 4.7E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 521 534 4.7E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 555 564 4.7E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 4.7E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 393 408 4.7E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DKL56_03420 b073f66a42eb37ddc5e5a7a4b5c51e0a 929 Pfam PF08264 Anticodon-binding domain of tRNA 679 832 6.0E-31 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DKL56_02925 2cc00c9e168be8c78952ef2e93ff0c59 306 Gene3D G3DSA:3.90.245.10 1 305 4.3E-81 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_02925 2cc00c9e168be8c78952ef2e93ff0c59 306 SUPERFAMILY SSF53590 3 304 2.75E-82 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_02925 2cc00c9e168be8c78952ef2e93ff0c59 306 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 295 8.3E-63 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.5E-39 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 4.2E-20 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.506 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 Gene3D G3DSA:3.10.430.100 60 151 2.2E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 SUPERFAMILY SSF55658 1 55 3.66E-16 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 SUPERFAMILY SSF55653 58 150 2.09E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 Gene3D G3DSA:3.40.5.10 1 51 2.0E-22 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00065 1a8b331aa59520e87df98a96d9d68e3a 151 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 1.9E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal DKL56_06675 4b53f81962e6ae806b1975989af4be5a 140 SUPERFAMILY SSF49764 4 132 7.32E-33 T 14-10-2018 IPR008978 HSP20-like chaperone DKL56_06675 4b53f81962e6ae806b1975989af4be5a 140 Pfam PF00011 Hsp20/alpha crystallin family 39 139 4.6E-20 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DKL56_06675 4b53f81962e6ae806b1975989af4be5a 140 Gene3D G3DSA:2.60.40.790 1 140 1.3E-31 T 14-10-2018 IPR008978 HSP20-like chaperone DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 421 7.5E-125 T 14-10-2018 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 Gene3D G3DSA:2.30.40.10 11 417 4.5E-135 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 421 41.041 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 SUPERFAMILY SSF51338 1 421 1.03E-27 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 SUPERFAMILY SSF51556 51 364 1.82E-98 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 Gene3D G3DSA:3.20.20.140 51 364 4.5E-135 T 14-10-2018 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 ProSitePatterns PS00483 Dihydroorotase signature 2. 299 310 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04915 54f2a2c7ee094f0c878cbd914d870b39 424 Pfam PF01979 Amidohydrolase family 48 418 3.5E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SMART SM00889 481 599 7.3E-73 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Pfam PF00009 Elongation factor Tu GTP binding domain 11 283 1.1E-69 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Pfam PF00679 Elongation factor G C-terminus 601 687 7.9E-29 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SUPERFAMILY SSF54211 480 599 4.3E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Hamap MF_00054_B Elongation factor G [fusA]. 8 692 108.046 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SUPERFAMILY SSF50447 266 403 4.29E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 5 692 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 182 4.2E-41 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Pfam PF03144 Elongation factor Tu domain 2 325 392 1.1E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Pfam PF03764 Elongation factor G, domain IV 480 598 4.5E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Gene3D G3DSA:2.40.30.10 294 406 3.4E-39 T 14-10-2018 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Gene3D G3DSA:3.30.230.10 485 688 3.9E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Gene3D G3DSA:3.30.70.870 407 484 9.4E-32 T 14-10-2018 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SUPERFAMILY SSF54980 604 691 4.46E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SMART SM00838 601 688 3.2E-52 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Gene3D G3DSA:3.40.50.300 4 293 1.6E-116 T 14-10-2018 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 PRINTS PR00315 GTP-binding elongation factor signature 60 68 5.2E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 PRINTS PR00315 GTP-binding elongation factor signature 132 141 5.2E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 PRINTS PR00315 GTP-binding elongation factor signature 80 90 5.2E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 PRINTS PR00315 GTP-binding elongation factor signature 14 27 5.2E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 PRINTS PR00315 GTP-binding elongation factor signature 96 107 5.2E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Gene3D G3DSA:3.30.70.240 605 675 3.9E-90 T 14-10-2018 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SUPERFAMILY SSF52540 8 283 3.05E-107 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 Pfam PF14492 Elongation Factor G, domain II 405 478 7.0E-33 T 14-10-2018 DKL56_06160 9f266eff55f11fb6264204d34d601e09 700 SUPERFAMILY SSF54980 404 481 2.09E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_04925 ba255ce97b78fc04408e774880ab6a64 179 SUPERFAMILY SSF53271 4 172 1.11E-41 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_04925 ba255ce97b78fc04408e774880ab6a64 179 Gene3D G3DSA:3.40.50.2020 1 177 4.4E-59 T 14-10-2018 DKL56_04925 ba255ce97b78fc04408e774880ab6a64 179 Pfam PF00156 Phosphoribosyl transferase domain 4 159 3.7E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_04925 ba255ce97b78fc04408e774880ab6a64 179 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 2 177 37.28 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DKL56_05150 2b32dd8ea2a19f794e0d50e8b2403a04 424 Pfam PF03217 SLAP domain 43 97 4.9E-8 T 14-10-2018 IPR024968 SLAP domain DKL56_05950 4b2dd2bcd761e528196efbe6a8c9a06e 290 Pfam PF13349 Putative adhesin 60 290 8.0E-12 T 14-10-2018 IPR025164 Putative adhesin DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 191 743 5.1E-143 T 14-10-2018 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 Pfam PF16593 Bridge helix of CRISPR-associated endonuclease Cas9 53 85 9.5E-12 T 14-10-2018 IPR032239 CRISPR-associated endonuclease Cas9, bridge helix DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 Pfam PF16595 PAM-interacting domain of CRISPR-associated endonuclease Cas9 1127 1390 7.7E-54 T 14-10-2018 IPR032237 CRISPR-associated endonuclease Cas9, PAM-interacting domain DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 Pfam PF13395 HNH endonuclease 857 909 2.8E-17 T 14-10-2018 IPR003615 HNH nuclease DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 7 1053 8.4E-163 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 DKL56_01060 915fdf06eda9af7250ace76761b2731c 1397 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 6 1390 15.073 T 14-10-2018 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 Gene3D G3DSA:2.40.50.140 9 88 3.2E-32 T 14-10-2018 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 SUPERFAMILY SSF50249 9 86 3.94E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06105 ec426fdab05e962584a52663dec398e6 88 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 9 85 23.086 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 10 81 3.0E-25 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 1.2E-32 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 Pfam PF00366 Ribosomal protein S17 15 82 9.7E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 6.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 6.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06105 ec426fdab05e962584a52663dec398e6 88 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 6.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Gene3D G3DSA:3.40.50.300 1 188 4.8E-65 T 14-10-2018 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Hamap MF_00071 Elongation factor 4 [lepA]. 1 603 201.317 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Pfam PF00009 Elongation factor Tu GTP binding domain 5 184 3.7E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Gene3D G3DSA:3.30.70.3380 371 484 8.2E-30 T 14-10-2018 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Gene3D G3DSA:3.30.70.870 289 370 3.7E-30 T 14-10-2018 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 TIGRFAM TIGR01393 lepA: elongation factor 4 5 600 1.1E-213 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 PRINTS PR00315 GTP-binding elongation factor signature 76 86 2.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 PRINTS PR00315 GTP-binding elongation factor signature 128 137 2.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 PRINTS PR00315 GTP-binding elongation factor signature 51 59 2.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 PRINTS PR00315 GTP-binding elongation factor signature 92 103 2.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 SMART SM00838 405 494 7.5E-4 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 SUPERFAMILY SSF52540 2 207 1.21E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Gene3D G3DSA:2.40.30.10 189 287 6.6E-32 T 14-10-2018 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Gene3D G3DSA:3.30.70.2570 486 559 2.2E-20 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Pfam PF06421 GTP-binding protein LepA C-terminus 494 598 6.2E-22 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 Pfam PF00679 Elongation factor G C-terminus 407 490 1.5E-18 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 177 3.6E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 SUPERFAMILY SSF54980 406 500 4.03E-21 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 SUPERFAMILY SSF50447 168 291 1.29E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_07040 dd42745e73623c8f8fe2cb25edae71c5 604 SUPERFAMILY SSF54980 295 371 2.63E-14 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Pfam PF16193 AAA C-terminal domain 187 265 3.2E-26 T 14-10-2018 IPR032423 AAA C-terminal domain DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Pfam PF12002 MgsA AAA+ ATPase C terminal 266 432 2.7E-65 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 SUPERFAMILY SSF48019 251 436 3.7E-72 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Gene3D G3DSA:1.20.272.10 239 343 2.4E-49 T 14-10-2018 DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 162 8.8E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 SUPERFAMILY SSF52540 9 244 4.56E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 SMART SM00382 49 165 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Gene3D G3DSA:3.40.50.300 3 163 1.5E-46 T 14-10-2018 DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Gene3D G3DSA:1.10.8.60 165 236 1.8E-18 T 14-10-2018 DKL56_00575 1f13bcab74db3b20d968577d3c44987f 440 Gene3D G3DSA:1.10.3710.10 344 440 1.6E-28 T 14-10-2018 DKL56_06810 79557d4e9c71e7f381e9924dccbe9767 245 SUPERFAMILY SSF54001 122 236 4.9E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DKL56_06810 79557d4e9c71e7f381e9924dccbe9767 245 Gene3D G3DSA:3.90.1720.10 94 245 1.3E-46 T 14-10-2018 DKL56_06810 79557d4e9c71e7f381e9924dccbe9767 245 Pfam PF00877 NlpC/P60 family 141 235 1.6E-27 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DKL56_06810 79557d4e9c71e7f381e9924dccbe9767 245 Pfam PF03217 SLAP domain 66 100 6.1E-5 T 14-10-2018 IPR024968 SLAP domain DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 4.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 Gene3D G3DSA:1.10.10.10 5 94 6.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 SUPERFAMILY SSF46785 5 91 6.92E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 SUPERFAMILY SSF53850 92 300 4.19E-17 T 14-10-2018 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 Pfam PF03466 LysR substrate binding domain 93 272 7.4E-13 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 Gene3D G3DSA:3.40.190.10 170 268 6.6E-14 T 14-10-2018 DKL56_07005 10e37e5739445247fca068c221f3dcfc 307 Gene3D G3DSA:3.40.190.10 97 169 6.6E-14 T 14-10-2018 DKL56_04180 bc35021d8c8bed57903bb4922e237361 143 SUPERFAMILY SSF51316 5 141 1.36E-54 T 14-10-2018 IPR011057 Mss4-like superfamily DKL56_04180 bc35021d8c8bed57903bb4922e237361 143 Pfam PF01641 SelR domain 11 126 7.1E-45 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DKL56_04180 bc35021d8c8bed57903bb4922e237361 143 Gene3D G3DSA:2.170.150.20 1 143 2.2E-53 T 14-10-2018 DKL56_04180 bc35021d8c8bed57903bb4922e237361 143 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 135 1.9E-56 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 96 140 3.0E-12 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 141 5.5E-26 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 24 96 1.0E-12 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 9 90 3.5E-22 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 6 140 21.166 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 SUPERFAMILY SSF51344 7 92 2.62E-19 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 Gene3D G3DSA:2.60.15.10 6 96 5.3E-23 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 Gene3D G3DSA:1.20.5.440 97 143 9.7E-12 T 14-10-2018 DKL56_03230 5dc2f5c0307d0b3c726d9fb3fa520588 145 SUPERFAMILY SSF46604 95 142 4.45E-5 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PIRSF PIRSF000097 2 278 2.0E-71 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 Gene3D G3DSA:3.20.20.100 2 276 1.3E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 Pfam PF00248 Aldo/keto reductase family 19 270 7.3E-42 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PRINTS PR00069 Aldo-keto reductase signature 94 112 2.7E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.7E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PRINTS PR00069 Aldo-keto reductase signature 207 231 2.7E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PRINTS PR00069 Aldo-keto reductase signature 136 153 2.7E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 PRINTS PR00069 Aldo-keto reductase signature 170 199 2.7E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_05290 81a0eac8d51ed7d22f1666025a2a4d61 288 SUPERFAMILY SSF51430 7 270 4.71E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 Gene3D G3DSA:1.20.1250.20 255 456 1.2E-14 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 SUPERFAMILY SSF103473 1 451 2.09E-49 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 Pfam PF07690 Major Facilitator Superfamily 16 402 2.5E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 Gene3D G3DSA:1.20.1720.10 11 244 2.7E-29 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 159 183 1.4E-11 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 332 352 1.4E-11 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.4E-11 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.4E-11 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.4E-11 T 14-10-2018 DKL56_03850 559323c54f6e23f7231e56e486d99ec6 456 PRINTS PR01036 Tetracycline resistance protein TetB signature 297 321 1.4E-11 T 14-10-2018 DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 450 3.4E-171 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Gene3D G3DSA:3.90.550.10 2 251 4.2E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Gene3D G3DSA:2.160.10.10 252 438 2.0E-49 T 14-10-2018 DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 SUPERFAMILY SSF53448 4 252 1.01E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 39.858 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 SUPERFAMILY SSF51161 248 444 1.72E-46 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Pfam PF12804 MobA-like NTP transferase domain 5 139 7.1E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 325 350 5.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DKL56_06595 154ac7e986d06f13cd99175fee2d6ea0 461 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 265 298 5.3E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 SUPERFAMILY SSF89447 1 136 2.72E-50 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 131 1.0E-64 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 55.852 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 Gene3D G3DSA:2.40.330.20 1 142 8.9E-52 T 14-10-2018 IPR038619 MraZ superfamily DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 138 2.0E-20 T 14-10-2018 IPR020603 MraZ domain DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 2.4E-21 T 14-10-2018 IPR020603 MraZ domain DKL56_03350 1fc74f6c25fb21eb59c34945162c04e1 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 8.0E-51 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 Gene3D G3DSA:2.40.37.10 17 427 6.1E-148 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 5.6E-26 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 SUPERFAMILY SSF51419 30 299 3.6E-73 T 14-10-2018 IPR029066 PLP-binding barrel DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 38.74 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 297 1.2E-63 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 SUPERFAMILY SSF50621 273 431 1.7E-50 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 298 388 2.8E-15 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 430 6.2E-145 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.3E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.3E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 1.3E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.3E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 1.3E-17 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DKL56_07515 9dcca027a4b486df7b63267ed8610105 436 Gene3D G3DSA:3.20.20.10 38 297 6.1E-148 T 14-10-2018 IPR029066 PLP-binding barrel DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 SUPERFAMILY SSF50447 3 86 1.02E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 3 167 22.263 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 SUPERFAMILY SSF50346 96 167 1.26E-17 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 166 1.4E-44 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 Pfam PF05239 PRC-barrel domain 95 166 1.4E-8 T 14-10-2018 IPR027275 PRC-barrel domain DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 Gene3D G3DSA:2.30.30.240 92 171 2.0E-18 T 14-10-2018 DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 Gene3D G3DSA:2.40.30.60 5 91 7.7E-19 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DKL56_04620 b9aa30baa8d0df82a9bcdf122d4e4b8b 171 Pfam PF01782 RimM N-terminal domain 6 86 2.4E-20 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 SMART SM00382 28 233 6.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 SMART SM00382 346 513 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 Pfam PF00005 ABC transporter 340 467 3.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 Gene3D G3DSA:3.40.50.300 285 513 6.4E-38 T 14-10-2018 DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 Pfam PF00005 ABC transporter 21 188 1.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 SUPERFAMILY SSF52540 303 509 3.22E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 Pfam PF12848 ABC transporter 228 311 1.6E-20 T 14-10-2018 IPR032781 ABC-transporter extension domain DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 Gene3D G3DSA:3.40.50.300 6 282 9.2E-64 T 14-10-2018 DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 SUPERFAMILY SSF52540 13 238 2.5E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06890 0f7463209bd9d2a254aaadf216ae01a6 515 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00885 5676fe08b6415cc6672d2d104032f0ea 182 Pfam PF03358 NADPH-dependent FMN reductase 1 146 3.5E-29 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DKL56_00885 5676fe08b6415cc6672d2d104032f0ea 182 SUPERFAMILY SSF52218 1 174 4.86E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_00885 5676fe08b6415cc6672d2d104032f0ea 182 Gene3D G3DSA:3.40.50.360 1 182 9.8E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 Pfam PF00248 Aldo/keto reductase family 15 258 7.4E-45 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 SUPERFAMILY SSF51430 4 265 6.94E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 Gene3D G3DSA:3.20.20.100 1 283 5.2E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 120 137 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.9E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PRINTS PR00069 Aldo-keto reductase signature 193 217 2.9E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PRINTS PR00069 Aldo-keto reductase signature 120 137 2.9E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PRINTS PR00069 Aldo-keto reductase signature 154 183 2.9E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PRINTS PR00069 Aldo-keto reductase signature 35 59 2.9E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PIRSF PIRSF000097 1 115 6.1E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 PIRSF PIRSF000097 111 275 1.7E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02770 4aabdcec5d519e0bab6f93e95cbd7382 284 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 594 703 2.9E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 361 7.2E-44 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Gene3D G3DSA:3.40.1110.10 344 524 2.5E-303 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 73 7.3E-21 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Gene3D G3DSA:1.20.1110.10 56 881 2.5E-303 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 SUPERFAMILY SSF81660 341 521 2.58E-49 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Pfam PF00122 E1-E2 ATPase 114 314 3.1E-54 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 SUPERFAMILY SSF56784 332 725 6.59E-60 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 475 493 1.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 637 1.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 1.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 678 1.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 SUPERFAMILY SSF81653 117 227 1.12E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Gene3D G3DSA:3.40.50.1000 331 666 2.5E-303 T 14-10-2018 IPR023214 HAD superfamily DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 10 880 6.3E-163 T 14-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 SMART SM00831 4 78 8.0E-27 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 336 342 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 SUPERFAMILY SSF81665 4 884 1.7E-129 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 334 348 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 549 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 517 528 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 164 178 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 1.2E-40 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Gene3D G3DSA:2.70.150.10 17 230 2.5E-303 T 14-10-2018 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Pfam PF00689 Cation transporting ATPase, C-terminus 706 882 5.3E-46 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DKL56_02040 34ec1c7ace36430c3f1c976cc7698e0c 889 Pfam PF00702 haloacid dehalogenase-like hydrolase 331 635 1.7E-26 T 14-10-2018 DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 PRINTS PR01576 Peptide deformylase signature 122 140 5.2E-23 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 PRINTS PR01576 Peptide deformylase signature 47 76 5.2E-23 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 PRINTS PR01576 Peptide deformylase signature 141 170 5.2E-23 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 PRINTS PR01576 Peptide deformylase signature 109 120 5.2E-23 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 Pfam PF01327 Polypeptide deformylase 4 172 3.3E-41 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 SUPERFAMILY SSF56420 3 179 4.06E-52 T 14-10-2018 IPR036821 Peptide deformylase superfamily DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 179 4.4E-39 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 PIRSF PIRSF004749 2 183 4.1E-39 T 14-10-2018 IPR023635 Peptide deformylase DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 Gene3D G3DSA:3.90.45.10 1 184 1.2E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily DKL56_03510 d18f904586820d70cdc75f6a3d1da243 184 Hamap MF_00163 Peptide deformylase [def]. 3 183 25.352 T 14-10-2018 IPR023635 Peptide deformylase DKL56_04665 3506c03761e0b4cfb740881034c29d43 589 Gene3D G3DSA:3.10.105.10 317 552 1.5E-69 T 14-10-2018 DKL56_04665 3506c03761e0b4cfb740881034c29d43 589 SUPERFAMILY SSF53850 49 582 7.44E-89 T 14-10-2018 DKL56_04665 3506c03761e0b4cfb740881034c29d43 589 Gene3D G3DSA:3.90.76.10 88 203 2.1E-17 T 14-10-2018 DKL56_04665 3506c03761e0b4cfb740881034c29d43 589 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 498 3.9E-61 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_04665 3506c03761e0b4cfb740881034c29d43 589 PIRSF PIRSF002741 1 586 2.5E-61 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 362 4.9E-93 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 193 358 8.5E-41 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 6.0E-40 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 Gene3D G3DSA:3.40.50.2000 167 351 1.2E-103 T 14-10-2018 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 367 32.133 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 Gene3D G3DSA:3.40.50.2000 4 357 1.2E-103 T 14-10-2018 DKL56_03380 e86c2d626dd155ff07fa39d45cc5b137 369 SUPERFAMILY SSF53756 1 368 1.53E-103 T 14-10-2018 DKL56_04145 015fde48483855734363a540ed0f5f55 174 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 3 163 22.124 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DKL56_04145 015fde48483855734363a540ed0f5f55 174 Pfam PF02130 Uncharacterized protein family UPF0054 19 158 2.7E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DKL56_04145 015fde48483855734363a540ed0f5f55 174 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 44 160 8.1E-37 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DKL56_04145 015fde48483855734363a540ed0f5f55 174 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 129 139 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DKL56_04145 015fde48483855734363a540ed0f5f55 174 Gene3D G3DSA:3.40.390.30 3 166 2.7E-36 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DKL56_04145 015fde48483855734363a540ed0f5f55 174 SUPERFAMILY SSF55486 21 160 7.81E-37 T 14-10-2018 DKL56_03495 2880648d039cb77fe9c43c7425137238 315 SMART SM00046 6 135 4.0E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DKL56_03495 2880648d039cb77fe9c43c7425137238 315 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 7 310 2.8E-38 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase DKL56_03495 2880648d039cb77fe9c43c7425137238 315 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 125 6.4E-23 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DKL56_03495 2880648d039cb77fe9c43c7425137238 315 Gene3D G3DSA:3.40.50.10330 1 137 2.6E-26 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DKL56_03495 2880648d039cb77fe9c43c7425137238 315 Gene3D G3DSA:2.60.200.40 143 305 5.0E-34 T 14-10-2018 DKL56_03495 2880648d039cb77fe9c43c7425137238 315 SUPERFAMILY SSF111331 6 307 1.44E-57 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DKL56_03890 0a767fd3898100a895e44e967dba4276 211 Pfam PF00293 NUDIX domain 70 183 3.0E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DKL56_03890 0a767fd3898100a895e44e967dba4276 211 SUPERFAMILY SSF55811 65 201 5.15E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DKL56_03890 0a767fd3898100a895e44e967dba4276 211 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 60 8.1E-24 T 14-10-2018 DKL56_03890 0a767fd3898100a895e44e967dba4276 211 Gene3D G3DSA:3.90.79.10 44 211 2.3E-35 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 SUPERFAMILY SSF54211 241 411 3.22E-58 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 SUPERFAMILY SSF56719 414 646 4.45E-81 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 SUPERFAMILY SSF55874 21 234 5.37E-70 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Gene3D G3DSA:3.30.565.10 19 239 4.8E-89 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Gene3D G3DSA:3.30.230.10 240 418 7.6E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 22 653 2.1E-286 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 19 654 84.998 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Pfam PF01751 Toprim domain 439 550 1.7E-17 T 14-10-2018 IPR006171 TOPRIM domain DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Gene3D G3DSA:3.40.50.670 419 654 1.9E-97 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 583 643 1.1E-25 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 SMART SM00433 51 647 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 SMART SM00387 47 193 5.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Pfam PF00204 DNA gyrase B 241 410 5.5E-63 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 49 192 1.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 22 32 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 240 262 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 394 414 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 332 348 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 380 394 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 199 214 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 214 227 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 607 619 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 623 639 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR01159 DNA gyrase subunit B signature 490 499 1.5E-63 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 51 66 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 86 99 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 544 556 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 129 143 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 440 454 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 586 602 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 506 522 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 288 301 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 PRINTS PR00418 DNA topoisomerase II family signature 524 541 3.8E-66 T 14-10-2018 DKL56_00025 9897ef3d046a70560308486487bc5b6b 654 ProSitePatterns PS00177 DNA topoisomerase II signature. 442 450 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_04280 d279d35f1442aab217098d11f4159b73 293 Gene3D G3DSA:1.10.10.10 1 84 2.0E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04280 d279d35f1442aab217098d11f4159b73 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 7.7E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04280 d279d35f1442aab217098d11f4159b73 293 SUPERFAMILY SSF46785 1 88 1.68E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_04280 d279d35f1442aab217098d11f4159b73 293 Pfam PF03466 LysR substrate binding domain 90 270 3.7E-16 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_04280 d279d35f1442aab217098d11f4159b73 293 SUPERFAMILY SSF53850 91 289 1.39E-17 T 14-10-2018 DKL56_04280 d279d35f1442aab217098d11f4159b73 293 Gene3D G3DSA:3.40.190.290 91 290 1.4E-21 T 14-10-2018 DKL56_02490 15c2853f1e1810ba8b5a56affbca552a 207 Pfam PF01928 CYTH domain 5 182 9.6E-13 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DKL56_02490 15c2853f1e1810ba8b5a56affbca552a 207 SMART SM01118 4 199 9.2E-9 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DKL56_02490 15c2853f1e1810ba8b5a56affbca552a 207 SUPERFAMILY SSF55154 4 199 1.16E-22 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DKL56_02490 15c2853f1e1810ba8b5a56affbca552a 207 Gene3D G3DSA:2.40.320.10 1 206 4.3E-36 T 14-10-2018 DKL56_07685 bc31a8fb5dbfc6fb8b528a688a157f0c 316 Pfam PF00144 Beta-lactamase 12 300 2.4E-34 T 14-10-2018 IPR001466 Beta-lactamase-related DKL56_07685 bc31a8fb5dbfc6fb8b528a688a157f0c 316 SUPERFAMILY SSF56601 2 297 1.86E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_07685 bc31a8fb5dbfc6fb8b528a688a157f0c 316 Gene3D G3DSA:3.40.710.10 1 309 1.6E-48 T 14-10-2018 DKL56_02025 ea9cae3c672d16eb935773a1615024ee 452 Pfam PF00367 phosphotransferase system, EIIB 10 42 4.6E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_02025 ea9cae3c672d16eb935773a1615024ee 452 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_02025 ea9cae3c672d16eb935773a1615024ee 452 SUPERFAMILY SSF55604 9 80 9.42E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_02025 ea9cae3c672d16eb935773a1615024ee 452 Pfam PF02378 Phosphotransferase system, EIIC 108 392 5.1E-29 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_02025 ea9cae3c672d16eb935773a1615024ee 452 Gene3D G3DSA:3.30.1360.60 1 78 1.3E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 SMART SM00864 14 206 2.9E-112 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 8 333 4.3E-131 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 SUPERFAMILY SSF55307 208 318 1.56E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 PRINTS PR00423 Cell division protein FtsZ signature 99 119 6.4E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 PRINTS PR00423 Cell division protein FtsZ signature 127 148 6.4E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 PRINTS PR00423 Cell division protein FtsZ signature 190 212 6.4E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 PRINTS PR00423 Cell division protein FtsZ signature 213 234 6.4E-49 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 SMART SM00865 208 325 2.3E-55 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 SUPERFAMILY SSF52490 14 209 2.62E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 8.5E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 Gene3D G3DSA:3.40.50.1440 4 221 5.6E-83 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 Pfam PF12327 FtsZ family, C-terminal domain 223 316 3.1E-33 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 354 38.794 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DKL56_03395 e659f2e50149a64a0a2480437abf90c9 441 Gene3D G3DSA:3.30.1330.20 222 329 1.8E-39 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DKL56_04945 35bd9cc9c2c6a342564902dfab716d46 394 Gene3D G3DSA:1.20.1250.20 5 383 1.5E-43 T 14-10-2018 DKL56_04945 35bd9cc9c2c6a342564902dfab716d46 394 Pfam PF07690 Major Facilitator Superfamily 16 293 4.1E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_04945 35bd9cc9c2c6a342564902dfab716d46 394 SUPERFAMILY SSF103473 10 388 3.27E-49 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_01590 70947233911a1bb95d92a2409169549c 786 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 785 20.389 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DKL56_01590 70947233911a1bb95d92a2409169549c 786 SMART SM00463 708 786 2.9E-18 T 14-10-2018 IPR002625 Smr domain DKL56_01590 70947233911a1bb95d92a2409169549c 786 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 409 425 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_01590 70947233911a1bb95d92a2409169549c 786 Pfam PF00488 MutS domain V 330 511 4.5E-34 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_01590 70947233911a1bb95d92a2409169549c 786 SMART SM00534 327 512 1.5E-67 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_01590 70947233911a1bb95d92a2409169549c 786 Gene3D G3DSA:3.40.50.300 292 597 1.3E-78 T 14-10-2018 DKL56_01590 70947233911a1bb95d92a2409169549c 786 SMART SM00533 9 314 1.4E-12 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DKL56_01590 70947233911a1bb95d92a2409169549c 786 SUPERFAMILY SSF48334 36 287 4.58E-23 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DKL56_01590 70947233911a1bb95d92a2409169549c 786 Pfam PF01713 Smr domain 711 786 1.1E-18 T 14-10-2018 IPR002625 Smr domain DKL56_01590 70947233911a1bb95d92a2409169549c 786 SUPERFAMILY SSF160443 710 786 5.62E-10 T 14-10-2018 IPR036063 Smr domain superfamily DKL56_01590 70947233911a1bb95d92a2409169549c 786 SUPERFAMILY SSF52540 292 513 8.77E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01590 70947233911a1bb95d92a2409169549c 786 Gene3D G3DSA:3.30.1370.110 700 786 4.4E-24 T 14-10-2018 DKL56_01590 70947233911a1bb95d92a2409169549c 786 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 786 2.1E-223 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DKL56_01590 70947233911a1bb95d92a2409169549c 786 PIRSF PIRSF005814 1 786 8.2E-247 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 379 1.8E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 426 1.8E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 347 355 1.8E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 407 1.8E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 279 293 1.8E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 SUPERFAMILY SSF51445 3 451 1.78E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 Pfam PF00232 Glycosyl hydrolase family 1 3 449 1.8E-117 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05825 ab22219d0ac2bb5c6d0d8accba20e5c8 453 Gene3D G3DSA:3.20.20.80 1 452 4.3E-133 T 14-10-2018 DKL56_05660 1e3111bc2b7f45616833684b3a376835 330 Gene3D G3DSA:1.10.3720.10 108 329 1.2E-29 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05660 1e3111bc2b7f45616833684b3a376835 330 SUPERFAMILY SSF161098 49 326 4.45E-32 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05660 1e3111bc2b7f45616833684b3a376835 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 328 4.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_05660 1e3111bc2b7f45616833684b3a376835 330 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 52 329 1.2E-76 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DKL56_06070 f7b46252b18214fd4d506021954299f2 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 28.955 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06070 f7b46252b18214fd4d506021954299f2 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 3.7E-48 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06070 f7b46252b18214fd4d506021954299f2 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 1.6E-43 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06070 f7b46252b18214fd4d506021954299f2 119 SUPERFAMILY SSF53137 7 117 4.8E-51 T 14-10-2018 DKL56_06070 f7b46252b18214fd4d506021954299f2 119 Gene3D G3DSA:3.30.420.100 5 119 2.1E-43 T 14-10-2018 DKL56_05230 60fefac992912b0ba6652514dac078c9 292 SUPERFAMILY SSF55120 82 282 1.3E-54 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05230 60fefac992912b0ba6652514dac078c9 292 Gene3D G3DSA:3.30.2350.10 72 283 1.1E-56 T 14-10-2018 DKL56_05230 60fefac992912b0ba6652514dac078c9 292 Pfam PF00849 RNA pseudouridylate synthase 89 236 1.8E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05230 60fefac992912b0ba6652514dac078c9 292 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03100 21638d6e48195003f272931bc6578a51 472 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 15 29 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_03100 21638d6e48195003f272931bc6578a51 472 Pfam PF00232 Glycosyl hydrolase family 1 8 462 4.4E-134 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 427 439 1.8E-10 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 362 370 1.8E-10 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 420 1.8E-10 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 1.8E-10 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 393 1.8E-10 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03100 21638d6e48195003f272931bc6578a51 472 Gene3D G3DSA:3.20.20.80 6 465 2.2E-141 T 14-10-2018 DKL56_03100 21638d6e48195003f272931bc6578a51 472 SUPERFAMILY SSF51445 9 461 4.88E-141 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_02065 b4ec4a139e0444912574222087759c29 217 SUPERFAMILY SSF161098 15 202 1.26E-45 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02065 b4ec4a139e0444912574222087759c29 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 215 9.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02065 b4ec4a139e0444912574222087759c29 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 9.7E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_02065 b4ec4a139e0444912574222087759c29 217 Gene3D G3DSA:1.10.3720.10 9 217 1.6E-53 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_03705 36e9928861635c25ddba95495de6cb13 159 SMART SM00257 115 159 2.6E-10 T 14-10-2018 IPR018392 LysM domain DKL56_03705 36e9928861635c25ddba95495de6cb13 159 Pfam PF01476 LysM domain 116 158 1.0E-13 T 14-10-2018 IPR018392 LysM domain DKL56_03705 36e9928861635c25ddba95495de6cb13 159 SUPERFAMILY SSF54106 114 158 9.29E-10 T 14-10-2018 DKL56_03705 36e9928861635c25ddba95495de6cb13 159 Gene3D G3DSA:3.10.350.10 113 159 1.6E-14 T 14-10-2018 IPR036779 LysM domain superfamily DKL56_07305 1c55d46e73308e4a065d5ef94e7a713c 166 Pfam PF00746 LPXTG cell wall anchor motif 127 165 3.1E-6 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DKL56_07305 1c55d46e73308e4a065d5ef94e7a713c 166 Pfam PF06458 MucBP domain 14 74 1.5E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07305 1c55d46e73308e4a065d5ef94e7a713c 166 Gene3D G3DSA:3.10.20.320 6 87 2.3E-22 T 14-10-2018 DKL56_00755 4fb25c52d3dc86794193bfe45e1c4e23 249 SUPERFAMILY SSF52540 4 231 2.26E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00755 4fb25c52d3dc86794193bfe45e1c4e23 249 Gene3D G3DSA:3.40.50.300 1 248 4.7E-70 T 14-10-2018 DKL56_00755 4fb25c52d3dc86794193bfe45e1c4e23 249 SMART SM00382 34 222 7.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00755 4fb25c52d3dc86794193bfe45e1c4e23 249 Pfam PF00005 ABC transporter 25 173 3.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 SUPERFAMILY SSF46946 132 222 3.4E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 272 1.4E-102 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Pfam PF06827 Zinc finger found in FPG and IleRS 245 272 9.0E-12 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Gene3D G3DSA:1.10.8.50 135 273 6.3E-49 T 14-10-2018 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 116 1.4E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 SUPERFAMILY SSF57716 222 272 2.19E-17 T 14-10-2018 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 SMART SM01232 133 225 1.9E-39 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 SUPERFAMILY SSF81624 2 142 3.53E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 SMART SM00898 2 117 1.3E-49 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 133 222 9.4E-30 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Gene3D G3DSA:3.20.190.10 1 134 1.1E-43 T 14-10-2018 IPR035937 MutM-like, N-terminal DKL56_05140 787d77a361c7ba2992384ce273420e8f 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 273 42.176 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 4 1203 0.0 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Pfam PF13361 UvrD-like helicase C-terminal domain 462 867 4.1E-39 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Pfam PF00580 UvrD/REP helicase N-terminal domain 5 451 1.4E-67 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Gene3D G3DSA:3.90.320.10 962 1204 2.0E-61 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Gene3D G3DSA:3.40.50.300 342 485 1.1E-37 T 14-10-2018 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Gene3D G3DSA:1.10.486.10 609 766 6.6E-58 T 14-10-2018 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1026 1194 6.0E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 SUPERFAMILY SSF52540 3 874 9.91E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 SUPERFAMILY SSF52980 981 1193 8.04E-28 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Gene3D G3DSA:3.40.50.300 1 182 9.6E-34 T 14-10-2018 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 1 1204 17.459 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 DKL56_04000 674b6d68af418733ca052e6ce4eb9758 1205 Gene3D G3DSA:1.10.10.1560 788 887 1.2E-7 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF04565 RNA polymerase Rpb2, domain 3 475 543 3.8E-28 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:3.90.1100.10 400 589 2.2E-71 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF04560 RNA polymerase Rpb2, domain 7 1069 1143 1.6E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF04563 RNA polymerase beta subunit 30 460 1.7E-28 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:3.90.1100.10 607 677 4.5E-17 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 SUPERFAMILY SSF64484 14 1155 0.0 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 226 894 1.3E-284 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF10385 RNA polymerase beta subunit external 1 domain 553 619 2.9E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF00562 RNA polymerase Rpb2, domain 6 681 1067 5.0E-158 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:2.40.50.150 784 928 1.3E-58 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 16 1145 12.127 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:3.90.1100.10 21 146 2.4E-49 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:2.40.50.100 678 752 3.2E-24 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:3.90.1800.10 1055 1109 1.0E-10 T 14-10-2018 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:3.90.1110.10 147 317 7.4E-53 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Gene3D G3DSA:2.40.270.10 979 1045 3.7E-24 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 ProSitePatterns PS01166 RNA polymerases beta chain signature. 920 932 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 416 4.6E-8 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06190 0967ab465b6ff80ad9b116bbb74e352e 1210 Pfam PF04561 RNA polymerase Rpb2, domain 2 141 290 1.7E-20 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 Gene3D G3DSA:1.10.10.10 1 84 1.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 SUPERFAMILY SSF46785 1 83 2.86E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 334 28.056 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 SUPERFAMILY SSF55781 71 344 6.47E-57 T 14-10-2018 DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 Pfam PF01628 HrcA protein C terminal domain 105 327 6.5E-47 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 Gene3D G3DSA:3.30.390.60 128 228 1.7E-40 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 340 3.3E-93 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 Gene3D G3DSA:3.30.450.40 105 339 1.7E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily DKL56_04455 90abba65e59728ff8fad9927ad8f1791 349 PIRSF PIRSF005485 1 345 9.9E-92 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DKL56_07560 7ca6d4870f495efa76d39c23d5d0798b 161 SUPERFAMILY SSF55729 22 159 9.73E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_07560 7ca6d4870f495efa76d39c23d5d0798b 161 Pfam PF00583 Acetyltransferase (GNAT) family 39 137 1.8E-10 T 14-10-2018 IPR000182 GNAT domain DKL56_07560 7ca6d4870f495efa76d39c23d5d0798b 161 Gene3D G3DSA:3.40.630.30 13 161 1.8E-22 T 14-10-2018 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 8.7E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 8.7E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 8.7E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 SUPERFAMILY SSF46955 3 113 1.32E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 SMART SM00422 3 71 5.7E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 Pfam PF13411 MerR HTH family regulatory protein 3 68 5.2E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_04360 59a8e1f79a36d0ae31306bb1c058e5c1 122 Gene3D G3DSA:1.10.1660.10 1 122 1.7E-30 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:3.30.1900.20 969 1091 9.4E-56 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF02811 PHP domain 333 692 9.4E-50 T 14-10-2018 IPR004013 PHP domain GO:0003824 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 821 1228 5.4E-87 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF00929 Exonuclease 419 573 3.7E-33 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 SMART SM00481 332 399 4.3E-24 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 SMART SM00479 417 583 2.5E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:1.10.150.870 1284 1421 2.4E-47 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 SUPERFAMILY SSF53098 417 872 5.06E-97 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 197 1.0E-17 T 14-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF14579 Helix-hairpin-helix motif 1346 1424 1.5E-11 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 414 629 1.4E-38 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1435 401.4 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:1.10.100.20 991 1038 9.4E-56 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:3.20.20.140 582 801 2.3E-51 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Pfam PF14480 DNA polymerase III polC-type N-terminus I 7 76 2.8E-12 T 14-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 227 1435 0.0 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:2.40.50.140 217 316 1.5E-24 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:3.30.420.10 410 581 2.9E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:1.10.150.700 1092 1180 1.5E-33 T 14-10-2018 DKL56_04500 ef189afcaeb79edfded11e2914121be9 1435 Gene3D G3DSA:1.10.150.700 1217 1283 5.7E-13 T 14-10-2018 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 7 25 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 197 211 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 88 105 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 176 187 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 38 47 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 PRINTS PR00395 Ribosomal protein S2 signature 159 176 1.4E-41 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 3 226 43.079 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 7 18 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 SUPERFAMILY SSF52313 7 228 8.37E-98 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 Gene3D G3DSA:1.10.287.610 104 151 5.1E-91 T 14-10-2018 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 Gene3D G3DSA:3.40.50.10490 9 220 5.1E-91 T 14-10-2018 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 227 1.7E-108 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DKL56_04555 cb3818c62f9fd9fd8f022b04f9b701ec 262 Pfam PF00318 Ribosomal protein S2 10 225 1.7E-98 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 Gene3D G3DSA:3.10.105.10 292 512 4.4E-148 T 14-10-2018 DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 PIRSF PIRSF002741 1 540 1.4E-97 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 Gene3D G3DSA:3.40.190.10 45 525 4.4E-148 T 14-10-2018 DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 461 7.9E-71 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 Gene3D G3DSA:3.90.76.10 66 190 4.4E-148 T 14-10-2018 DKL56_02085 1a7115ad62051706899195ef2e2ca0e7 540 SUPERFAMILY SSF53850 28 537 2.53E-112 T 14-10-2018 DKL56_00865 48ad0e518f72771900871cad85b3edfa 224 SMART SM00382 32 219 5.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00865 48ad0e518f72771900871cad85b3edfa 224 SUPERFAMILY SSF52540 3 222 3.08E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00865 48ad0e518f72771900871cad85b3edfa 224 Pfam PF00005 ABC transporter 23 171 2.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00865 48ad0e518f72771900871cad85b3edfa 224 Gene3D G3DSA:3.40.50.300 1 224 3.8E-66 T 14-10-2018 DKL56_00865 48ad0e518f72771900871cad85b3edfa 224 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_03430 952b76a6e494c824042ffcf8b6c166fa 187 Gene3D G3DSA:3.90.79.10 5 185 7.0E-51 T 14-10-2018 DKL56_03430 952b76a6e494c824042ffcf8b6c166fa 187 SUPERFAMILY SSF55811 8 178 2.3E-44 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DKL56_03430 952b76a6e494c824042ffcf8b6c166fa 187 Pfam PF00293 NUDIX domain 40 159 8.0E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DKL56_02865 bd5b6fa163c4d3c26d864121851cb2a7 505 Pfam PF00534 Glycosyl transferases group 1 326 483 1.8E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_02865 bd5b6fa163c4d3c26d864121851cb2a7 505 Gene3D G3DSA:3.40.50.2000 241 500 3.1E-46 T 14-10-2018 DKL56_02865 bd5b6fa163c4d3c26d864121851cb2a7 505 Pfam PF16993 Accessory Sec system protein Asp1 20 166 2.5E-6 T 14-10-2018 IPR022372 Accessory secretory system protein Asp1 GO:0015031 DKL56_02865 bd5b6fa163c4d3c26d864121851cb2a7 505 Gene3D G3DSA:3.40.50.2000 306 489 3.1E-46 T 14-10-2018 DKL56_02865 bd5b6fa163c4d3c26d864121851cb2a7 505 SUPERFAMILY SSF53756 214 500 6.28E-50 T 14-10-2018 DKL56_05560 3b1cddb25c7370ea17613dc26f9736b3 245 SUPERFAMILY SSF54637 141 242 2.28E-18 T 14-10-2018 IPR029069 HotDog domain superfamily DKL56_05560 3b1cddb25c7370ea17613dc26f9736b3 245 Pfam PF01643 Acyl-ACP thioesterase 2 244 5.8E-53 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 DKL56_05560 3b1cddb25c7370ea17613dc26f9736b3 245 Gene3D G3DSA:3.10.129.10 1 245 1.6E-61 T 14-10-2018 DKL56_05560 3b1cddb25c7370ea17613dc26f9736b3 245 SUPERFAMILY SSF54637 2 143 7.11E-38 T 14-10-2018 IPR029069 HotDog domain superfamily DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 Pfam PF00122 E1-E2 ATPase 131 309 1.8E-55 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 Gene3D G3DSA:3.40.50.1000 310 573 3.0E-91 T 14-10-2018 IPR023214 HAD superfamily DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 68 629 3.1E-194 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 447 458 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 178 192 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 540 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 469 479 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 544 556 2.5E-29 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 SUPERFAMILY SSF81653 133 228 4.84E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 535 3.8E-45 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 ProSitePatterns PS01229 Hypothetical cof family signature 2. 521 543 - T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 101 600 3.6E-94 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 SUPERFAMILY SSF81665 56 608 2.35E-18 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 SUPERFAMILY SSF56784 328 626 3.04E-57 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 50 629 7.3E-189 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 Gene3D G3DSA:2.70.150.20 116 232 9.4E-39 T 14-10-2018 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 Gene3D G3DSA:3.40.1110.10 340 454 3.0E-91 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 552 577 5.2E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02895 569f29fd2f45946a3ba8cb1e6a7a2651 634 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 521 537 5.2E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 SUPERFAMILY SSF55194 2 183 9.68E-66 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 Gene3D G3DSA:1.10.132.20 12 182 7.9E-65 T 14-10-2018 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 Pfam PF01765 Ribosome recycling factor 20 182 1.2E-59 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.684 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 184 6.0E-69 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DKL56_04525 18f4037a93aaf639c97736dd4772b4ec 185 Gene3D G3DSA:3.30.1360.40 31 105 7.9E-65 T 14-10-2018 DKL56_01425 ad5756bfddc5b1ca3f0d7df73ed9ab46 330 SUPERFAMILY SSF51569 10 323 2.01E-59 T 14-10-2018 DKL56_01425 ad5756bfddc5b1ca3f0d7df73ed9ab46 330 Pfam PF01791 DeoC/LacD family aldolase 22 284 3.6E-53 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DKL56_01425 ad5756bfddc5b1ca3f0d7df73ed9ab46 330 SMART SM01133 22 285 1.7E-22 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DKL56_01425 ad5756bfddc5b1ca3f0d7df73ed9ab46 330 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 330 172.083 T 14-10-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 DKL56_01425 ad5756bfddc5b1ca3f0d7df73ed9ab46 330 Gene3D G3DSA:3.20.20.70 2 327 4.2E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 466 1.5E-146 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 811 31.999 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 659 701 3.7E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 717 759 0.029 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 596 0.0073 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 607 653 0.094 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Gene3D G3DSA:2.120.10.90 499 811 1.3E-70 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 SUPERFAMILY SSF56719 30 485 3.27E-163 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 SUPERFAMILY SSF101904 499 809 2.22E-72 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 SMART SM00434 10 463 6.8E-237 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Gene3D G3DSA:3.30.1360.40 235 331 2.7E-191 T 14-10-2018 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 7 753 2.3E-299 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Gene3D G3DSA:1.10.268.10 368 456 2.7E-191 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_03865 42dc7d4747aa7e591e0787c7a732aec7 817 Gene3D G3DSA:3.90.199.10 31 485 2.7E-191 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 Pfam PF00108 Thiolase, N-terminal domain 4 251 6.4E-72 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 SUPERFAMILY SSF53901 260 378 2.38E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 ProSitePatterns PS00099 Thiolases active site. 363 376 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 SUPERFAMILY SSF53901 3 259 1.15E-65 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 Gene3D G3DSA:3.40.47.10 5 265 5.7E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 377 2.7E-120 T 14-10-2018 IPR002155 Thiolase GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 PIRSF PIRSF000429 1 381 2.1E-110 T 14-10-2018 IPR002155 Thiolase GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 Gene3D G3DSA:3.40.47.10 126 377 5.7E-128 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02385 8628e8d64819054cf11f116543bf4787 383 Pfam PF02803 Thiolase, C-terminal domain 260 377 8.2E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DKL56_06465 39e0ccd3f2bd9749e0d97bcd4bcc9033 262 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 261 1.1E-80 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 Gene3D G3DSA:2.70.70.10 1 149 3.9E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 Pfam PF02378 Phosphotransferase system, EIIC 290 573 8.5E-35 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 Pfam PF00367 phosphotransferase system, EIIB 174 204 1.3E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 6 126 9.0E-41 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 Gene3D G3DSA:3.30.1360.60 164 243 2.2E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 68 80 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 185 202 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 5 129 1.2E-46 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 SUPERFAMILY SSF55604 173 246 4.05E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_00205 3dda4f1317ab63a30117d25c257c33dc 661 SUPERFAMILY SSF51261 2 147 1.33E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 Gene3D G3DSA:2.60.40.10 336 414 1.2E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 PRINTS PR01729 Lactobacillus surface layer protein signature 279 294 1.0E-21 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 PRINTS PR01729 Lactobacillus surface layer protein signature 551 570 1.0E-21 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 PRINTS PR01729 Lactobacillus surface layer protein signature 491 506 1.0E-21 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 PRINTS PR01729 Lactobacillus surface layer protein signature 577 594 1.0E-21 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 Pfam PF03217 SLAP domain 556 611 1.2E-16 T 14-10-2018 IPR024968 SLAP domain DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 Pfam PF03217 SLAP domain 430 477 0.0036 T 14-10-2018 IPR024968 SLAP domain DKL56_07100 000b94ed96ff48d045219e2342708eb2 613 Pfam PF03217 SLAP domain 495 547 7.5E-16 T 14-10-2018 IPR024968 SLAP domain DKL56_03285 77481169e38b96a42a61f312454409c7 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.438 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DKL56_03285 77481169e38b96a42a61f312454409c7 203 SMART SM00363 93 157 9.9E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03285 77481169e38b96a42a61f312454409c7 203 Gene3D G3DSA:1.10.1050.10 6 201 1.2E-71 T 14-10-2018 DKL56_03285 77481169e38b96a42a61f312454409c7 203 Pfam PF01479 S4 domain 94 140 8.1E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03285 77481169e38b96a42a61f312454409c7 203 Gene3D G3DSA:3.10.290.10 92 186 1.2E-71 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_03285 77481169e38b96a42a61f312454409c7 203 SMART SM01390 3 92 1.1E-42 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DKL56_03285 77481169e38b96a42a61f312454409c7 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 4.9E-76 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DKL56_03285 77481169e38b96a42a61f312454409c7 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 8.9E-27 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DKL56_03285 77481169e38b96a42a61f312454409c7 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03285 77481169e38b96a42a61f312454409c7 203 SUPERFAMILY SSF55174 3 201 1.96E-62 T 14-10-2018 DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 Gene3D G3DSA:1.10.10.10 4 61 1.9E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 58 4.1E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 SUPERFAMILY SSF64288 94 217 2.2E-10 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 Pfam PF07702 UTRA domain 90 212 2.2E-8 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 Gene3D G3DSA:3.40.1410.10 78 224 1.3E-12 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 SUPERFAMILY SSF46785 6 59 1.32E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01365 5fe0672f5d60b63a4c84a71fc335343c 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.2E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_03840 3129e101e257989d59858daa9c059cca 469 SMART SM01086 361 457 5.3E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_03840 3129e101e257989d59858daa9c059cca 469 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 469 1.2E-183 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DKL56_03840 3129e101e257989d59858daa9c059cca 469 SUPERFAMILY SSF52540 3 464 4.83E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03840 3129e101e257989d59858daa9c059cca 469 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 361 435 2.7E-9 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_03840 3129e101e257989d59858daa9c059cca 469 Gene3D G3DSA:1.10.8.60 361 466 4.7E-37 T 14-10-2018 DKL56_03840 3129e101e257989d59858daa9c059cca 469 Gene3D G3DSA:1.10.8.10 248 273 2.6E-24 T 14-10-2018 DKL56_03840 3129e101e257989d59858daa9c059cca 469 Gene3D G3DSA:3.40.50.300 241 336 2.6E-24 T 14-10-2018 DKL56_03840 3129e101e257989d59858daa9c059cca 469 SMART SM00382 49 358 4.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03840 3129e101e257989d59858daa9c059cca 469 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 469 40.733 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DKL56_03840 3129e101e257989d59858daa9c059cca 469 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 145 1.1E-6 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_03840 3129e101e257989d59858daa9c059cca 469 Gene3D G3DSA:3.40.50.300 3 149 5.8E-35 T 14-10-2018 DKL56_03840 3129e101e257989d59858daa9c059cca 469 Pfam PF07724 AAA domain (Cdc48 subfamily) 218 355 1.2E-38 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 Pfam PF03217 SLAP domain 275 324 9.6E-17 T 14-10-2018 IPR024968 SLAP domain DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 Pfam PF03217 SLAP domain 334 385 3.3E-19 T 14-10-2018 IPR024968 SLAP domain DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 Gene3D G3DSA:3.40.80.10 11 239 9.6E-61 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 SUPERFAMILY SSF55846 66 228 4.11E-31 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 SMART SM00644 67 208 1.2E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_06940 4209593bc82acd0a6ecf4ace98898dd3 388 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 77 206 2.1E-11 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 Gene3D G3DSA:3.30.1620.10 183 298 0.0 T 14-10-2018 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 Pfam PF02867 Ribonucleotide reductase, barrel domain 257 487 7.3E-9 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 Gene3D G3DSA:3.20.70.20 12 692 0.0 T 14-10-2018 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 Gene3D G3DSA:3.90.1390.10 573 711 0.0 T 14-10-2018 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 SUPERFAMILY SSF51998 6 727 6.87E-240 T 14-10-2018 DKL56_00295 d7b46242399da6bccf8ed923f4eaf6e3 744 TIGRFAM TIGR02505 RTPR: ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent 19 744 3.5E-267 T 14-10-2018 IPR013345 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0006260|GO:0008998|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 SUPERFAMILY SSF75005 7 323 2.51E-117 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 Gene3D G3DSA:2.60.120.560 332 450 1.5E-146 T 14-10-2018 DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 SMART SM00640 17 435 3.3E-147 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 SUPERFAMILY SSF49899 322 468 3.17E-19 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 2 445 2.0E-154 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 Gene3D G3DSA:2.115.10.20 12 331 1.5E-146 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 17 322 6.7E-108 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DKL56_00495 9f39df7b4ed7c4b87958da10dcf5d64c 470 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 325 456 1.1E-15 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 401 420 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 185 208 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 2 20 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 213 233 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 166 183 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PRINTS PR01607 Apyrase family signature 323 346 1.3E-24 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 Gene3D G3DSA:3.90.780.10 278 452 1.0E-8 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 SUPERFAMILY SSF55816 291 453 1.57E-17 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 SUPERFAMILY SSF56300 3 274 8.55E-64 T 14-10-2018 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 Pfam PF02872 5'-nucleotidase, C-terminal domain 292 415 1.5E-7 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 PIRSF PIRSF036361 1 452 6.9E-161 T 14-10-2018 IPR011240 Phosphoesterase-related protein YunD DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 Pfam PF00149 Calcineurin-like phosphoesterase 4 202 2.2E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 ProSitePatterns PS00785 5'-nucleotidase signature 1. 4 16 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_01655 77e24de4e67e32db56e5b8cf1815d69e 466 Gene3D G3DSA:3.60.21.10 1 269 8.5E-55 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 Gene3D G3DSA:3.30.70.600 1 102 1.2E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 3.0E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.8E-46 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 SMART SM01403 7 101 1.5E-60 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.392 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 SUPERFAMILY SSF54999 6 102 6.93E-40 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.4E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.4E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06155 4521d1bccdd390615eedc6dca741e37d 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.4E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PIRSF PIRSF001529 1 431 1.8E-177 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 SUPERFAMILY SSF46589 1 112 2.14E-27 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 231 405 4.4E-38 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 SUPERFAMILY SSF55681 117 423 1.73E-101 T 14-10-2018 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 Gene3D G3DSA:1.10.287.40 1 105 2.3E-25 T 14-10-2018 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 422 6.1E-164 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 7.7E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 427 40.635 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 Gene3D G3DSA:3.30.930.10 106 433 5.4E-125 T 14-10-2018 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_01230 5976f82c9d9c3faa44ed3c4414e6a891 435 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 Gene3D G3DSA:1.10.287.180 4 77 1.3E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 4 157 31.623 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 PIRSF PIRSF006092 1 158 4.4E-50 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 Pfam PF03449 Transcription elongation factor, N-terminal 7 76 2.9E-29 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 SUPERFAMILY SSF46557 5 80 8.63E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 19 50 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 157 1.3E-26 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 157 1.7E-54 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 Gene3D G3DSA:3.10.50.30 78 157 7.2E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DKL56_05000 3c97773a42fc8c8a49de4c98ad54caea 158 SUPERFAMILY SSF54534 83 157 7.61E-21 T 14-10-2018 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 Gene3D G3DSA:3.30.360.10 155 320 7.7E-129 T 14-10-2018 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 161 318 5.1E-54 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 SUPERFAMILY SSF51735 1 184 4.25E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 SMART SM00846 3 156 3.8E-87 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 Gene3D G3DSA:3.40.50.720 4 331 7.7E-129 T 14-10-2018 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PIRSF PIRSF000149 1 338 5.2E-117 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 107 4.8E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 330 5.2E-127 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 SUPERFAMILY SSF55347 156 319 4.46E-56 T 14-10-2018 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 114 127 2.2E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 235 252 2.2E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 271 286 2.2E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 150 168 2.2E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02735 444ba8ec41e7376c836c5831461cc263 338 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 177 193 2.2E-26 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 Gene3D G3DSA:1.10.1040.10 193 338 1.3E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 164 9.6E-44 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 SUPERFAMILY SSF51735 3 182 7.76E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 137 157 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 1.0E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 SUPERFAMILY SSF48179 183 336 1.67E-55 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 PIRSF PIRSF000114 1 337 7.5E-106 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 327 34.06 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.8E-51 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DKL56_02640 0cf96ce97375a70961226c47af01bd10 339 Gene3D G3DSA:3.40.50.720 1 191 4.1E-58 T 14-10-2018 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 SUPERFAMILY SSF50494 70 301 7.07E-55 T 14-10-2018 IPR009003 Peptidase S1, PA clan DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 Gene3D G3DSA:2.40.10.10 66 182 3.7E-25 T 14-10-2018 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 SUPERFAMILY SSF50156 291 399 4.6E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 350 362 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 256 273 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 196 220 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 1.0E-38 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 Gene3D G3DSA:2.40.10.10 188 306 2.3E-38 T 14-10-2018 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 Pfam PF13180 PDZ domain 305 401 2.2E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 Pfam PF13365 Trypsin-like peptidase domain 122 263 4.7E-31 T 14-10-2018 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 Gene3D G3DSA:2.30.42.10 307 404 2.0E-26 T 14-10-2018 DKL56_00485 cb0ee0cd8d060aac77eb7e0a98f05628 404 SMART SM00228 305 392 3.5E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 SUPERFAMILY SSF54506 7 286 9.55E-68 T 14-10-2018 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 Pfam PF02567 Phenazine biosynthesis-like protein 12 282 9.1E-59 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 PIRSF PIRSF016184 3 286 1.6E-72 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 284 5.8E-69 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 Gene3D G3DSA:3.10.310.10 10 280 7.8E-82 T 14-10-2018 DKL56_05530 959eb7c4325c6ff1f74aaec04ded6e32 289 Gene3D G3DSA:3.10.310.10 127 278 7.8E-82 T 14-10-2018 DKL56_02880 8190621f32ba00a5b2ca2983383d8670 141 SUPERFAMILY SSF46785 2 139 9.85E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02880 8190621f32ba00a5b2ca2983383d8670 141 Pfam PF01047 MarR family 48 87 1.0E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02880 8190621f32ba00a5b2ca2983383d8670 141 SMART SM00347 21 124 2.9E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02880 8190621f32ba00a5b2ca2983383d8670 141 Gene3D G3DSA:1.10.10.10 1 136 4.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 307 4.2E-89 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 SUPERFAMILY SSF50486 205 306 2.2E-24 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 Gene3D G3DSA:3.10.25.10 207 312 3.5E-24 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 Pfam PF00551 Formyl transferase 4 180 3.0E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 304 32.736 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 SUPERFAMILY SSF53328 4 202 2.09E-60 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 Pfam PF02911 Formyl transferase, C-terminal domain 204 301 3.1E-22 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DKL56_04765 b49e44857a29f2f9292c46b459b5f75a 314 Gene3D G3DSA:3.40.50.170 1 206 1.1E-74 T 14-10-2018 DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 SUPERFAMILY SSF55658 1 46 1.83E-14 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 PIRSF PIRSF036852 1 265 5.9E-42 T 14-10-2018 IPR017067 Ribonuclease H1, eukaryote GO:0000287|GO:0004523 DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 SUPERFAMILY SSF53098 108 265 4.68E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 Gene3D G3DSA:3.40.970.10 1 48 3.9E-19 T 14-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 Pfam PF00075 RNase H 108 258 2.6E-23 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 Pfam PF01693 Caulimovirus viroplasmin 2 45 1.3E-18 T 14-10-2018 IPR011320 Ribonuclease H1, N-terminal DKL56_00645 1d2250ead6f5ca0a801d924cab966a6c 266 Gene3D G3DSA:3.30.420.10 95 266 8.4E-41 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_05095 1cf908a58c6d5eb18bcee9cfb114472f 218 Gene3D G3DSA:1.10.3720.10 10 217 2.6E-51 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05095 1cf908a58c6d5eb18bcee9cfb114472f 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 4.3E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_05095 1cf908a58c6d5eb18bcee9cfb114472f 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 216 1.8E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_05095 1cf908a58c6d5eb18bcee9cfb114472f 218 SUPERFAMILY SSF161098 15 203 1.15E-44 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 SUPERFAMILY SSF54373 257 354 1.2E-9 T 14-10-2018 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 Pfam PF01266 FAD dependent oxidoreductase 21 353 1.2E-49 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 Gene3D G3DSA:1.10.8.870 447 580 3.1E-41 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 435 556 7.2E-14 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 353 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 395 407 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 5.6E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 SUPERFAMILY SSF51905 8 249 1.43E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 Gene3D G3DSA:3.30.9.10 102 354 1.6E-124 T 14-10-2018 DKL56_03015 bba9215e8fd551f64f3ff649f1d4399e 580 Gene3D G3DSA:3.50.50.60 18 407 1.6E-124 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_05210 7f20ecec6ee393c156e87fd0980ea45d 831 SUPERFAMILY SSF52540 1 816 9.35E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05210 7f20ecec6ee393c156e87fd0980ea45d 831 Gene3D G3DSA:3.40.50.300 571 821 1.1E-12 T 14-10-2018 DKL56_05210 7f20ecec6ee393c156e87fd0980ea45d 831 Pfam PF13514 AAA domain 1 209 7.4E-19 T 14-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain DKL56_05210 7f20ecec6ee393c156e87fd0980ea45d 831 Gene3D G3DSA:3.40.50.300 1 410 3.0E-19 T 14-10-2018 DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF03217 SLAP domain 1429 1478 4.9E-9 T 14-10-2018 IPR024968 SLAP domain DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF03217 SLAP domain 1296 1346 7.1E-10 T 14-10-2018 IPR024968 SLAP domain DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF03217 SLAP domain 1356 1405 4.6E-11 T 14-10-2018 IPR024968 SLAP domain DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF03217 SLAP domain 1488 1537 7.5E-10 T 14-10-2018 IPR024968 SLAP domain DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF07564 Domain of Unknown Function (DUF1542) 386 460 1.4E-7 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF07564 Domain of Unknown Function (DUF1542) 469 540 6.6E-7 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF07564 Domain of Unknown Function (DUF1542) 633 698 1.3E-11 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF07564 Domain of Unknown Function (DUF1542) 225 296 1.2E-8 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_05835 86d7c075062885c849dbfdc22c59ea13 1543 Pfam PF07564 Domain of Unknown Function (DUF1542) 143 218 1.3E-8 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 190 3.9E-72 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 Pfam PF01926 50S ribosome-binding GTPase 25 143 3.9E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 24 161 6.1E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 Gene3D G3DSA:3.40.50.300 1 194 6.8E-55 T 14-10-2018 DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 SUPERFAMILY SSF52540 16 192 1.54E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03595 22eb68250a299bd1a6eb207f330985cf 194 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 194 28.684 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DKL56_01860 a911f558cd73e5746c723228321bf046 776 Pfam PF08206 Ribonuclease B OB domain 75 135 2.0E-13 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DKL56_01860 a911f558cd73e5746c723228321bf046 776 SMART SM00955 262 593 4.4E-177 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DKL56_01860 a911f558cd73e5746c723228321bf046 776 SUPERFAMILY SSF50249 642 720 1.01E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01860 a911f558cd73e5746c723228321bf046 776 SUPERFAMILY SSF50249 222 639 4.28E-141 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01860 a911f558cd73e5746c723228321bf046 776 Pfam PF00773 RNB domain 262 591 6.3E-111 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DKL56_01860 a911f558cd73e5746c723228321bf046 776 SUPERFAMILY SSF50249 56 139 5.33E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01860 a911f558cd73e5746c723228321bf046 776 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 62 721 8.9E-194 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DKL56_01860 a911f558cd73e5746c723228321bf046 776 Gene3D G3DSA:2.40.50.140 62 139 1.2E-14 T 14-10-2018 DKL56_01860 a911f558cd73e5746c723228321bf046 776 Gene3D G3DSA:2.40.50.140 643 744 1.4E-19 T 14-10-2018 DKL56_01860 a911f558cd73e5746c723228321bf046 776 ProSitePatterns PS01175 Ribonuclease II family signature. 560 584 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DKL56_01860 a911f558cd73e5746c723228321bf046 776 Hamap MF_01895 Ribonuclease R [rnr]. 26 722 54.416 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DKL56_01860 a911f558cd73e5746c723228321bf046 776 TIGRFAM TIGR02063 RNase_R: ribonuclease R 9 722 1.5E-244 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DKL56_01860 a911f558cd73e5746c723228321bf046 776 Pfam PF00575 S1 RNA binding domain 639 721 4.3E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_01860 a911f558cd73e5746c723228321bf046 776 SUPERFAMILY SSF50249 130 238 5.69E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01860 a911f558cd73e5746c723228321bf046 776 SMART SM00316 640 722 4.4E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 72 604 1.2E-152 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 Gene3D G3DSA:3.40.1110.10 325 434 6.8E-67 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 Gene3D G3DSA:3.40.50.1000 296 556 6.8E-67 T 14-10-2018 IPR023214 HAD superfamily DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 94 581 5.0E-68 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 SUPERFAMILY SSF81665 74 308 4.71E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 Gene3D G3DSA:2.70.150.20 107 226 2.3E-30 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 SUPERFAMILY SSF56784 312 600 2.51E-44 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 Pfam PF00122 E1-E2 ATPase 123 294 7.5E-45 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 503 519 4.6E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 535 560 4.6E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 Pfam PF00702 haloacid dehalogenase-like hydrolase 311 517 2.5E-25 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 SUPERFAMILY SSF81653 125 222 3.79E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 427 438 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 503 522 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 527 539 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 460 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 172 186 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 314 328 2.9E-28 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 72 604 4.6E-140 T 14-10-2018 DKL56_07730 dbf94cbeed182c5b97425c910137bfbc 622 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 316 322 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 213 92.699 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 Gene3D G3DSA:3.40.1350.10 39 209 1.5E-60 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 PIRSF PIRSF037785 27 208 3.9E-76 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 Pfam PF03838 Recombination protein U 36 198 1.8E-64 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 SUPERFAMILY SSF52980 38 201 6.43E-63 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DKL56_03965 76d248ad73558fa1ca6771bc680acf0a 213 TIGRFAM TIGR00648 recU: recombination protein U 35 200 1.3E-66 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 SUPERFAMILY SSF46894 132 232 1.11E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 SMART SM00862 156 232 1.2E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 Gene3D G3DSA:1.10.10.10 133 238 5.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 SMART SM00448 3 113 1.1E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 SUPERFAMILY SSF52172 2 129 8.82E-42 T 14-10-2018 IPR011006 CheY-like superfamily DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 Pfam PF00072 Response regulator receiver domain 5 114 7.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 9.3E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_00460 74a76a8ce403586a859c3b11b5a53f47 238 Gene3D G3DSA:3.40.50.2300 1 132 2.2E-38 T 14-10-2018 DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 Gene3D G3DSA:2.30.30.60 130 178 3.3E-16 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 SUPERFAMILY SSF82689 184 270 2.88E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 Gene3D G3DSA:3.30.70.100 185 267 8.7E-8 T 14-10-2018 DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 Pfam PF00924 Mechanosensitive ion channel 72 268 1.5E-37 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 SUPERFAMILY SSF50182 115 176 1.54E-14 T 14-10-2018 IPR010920 LSM domain superfamily DKL56_01620 937a6186c8702dc5f1f7649ad566ec07 271 SUPERFAMILY SSF82861 32 113 5.89E-14 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 Gene3D G3DSA:3.40.50.300 217 452 4.2E-44 T 14-10-2018 DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 SMART SM00490 258 339 4.9E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 Pfam PF00271 Helicase conserved C-terminal domain 233 339 1.0E-26 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 Gene3D G3DSA:3.40.50.300 2 212 1.5E-59 T 14-10-2018 DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 Pfam PF00270 DEAD/DEAH box helicase 27 191 4.6E-40 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 SUPERFAMILY SSF52540 33 351 9.56E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05450 3273a39fd9be0dcac588e2ff04ea814e 452 SMART SM00487 22 227 1.3E-47 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 SUPERFAMILY SSF75217 1 157 1.64E-59 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 8.3E-53 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.2E-57 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 29.273 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 Gene3D G3DSA:3.40.1280.10 1 159 2.0E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKL56_00490 77056480339426aea9bfc398b84a9bf1 159 PIRSF PIRSF004505 1 159 4.5E-51 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DKL56_05055 15a36af24d1ab40c0362712a29d37a55 115 SUPERFAMILY SSF81301 2 113 2.78E-34 T 14-10-2018 DKL56_05055 15a36af24d1ab40c0362712a29d37a55 115 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.69 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DKL56_05055 15a36af24d1ab40c0362712a29d37a55 115 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 2.4E-22 T 14-10-2018 DKL56_05055 15a36af24d1ab40c0362712a29d37a55 115 Gene3D G3DSA:3.30.460.10 2 115 8.7E-31 T 14-10-2018 DKL56_05055 15a36af24d1ab40c0362712a29d37a55 115 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 5.0E-30 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 Gene3D G3DSA:3.40.50.150 86 281 3.3E-50 T 14-10-2018 DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 276 2.7E-74 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 17 282 3.1E-55 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 183 189 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 Pfam PF05175 Methyltransferase small domain 105 198 1.7E-12 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 SUPERFAMILY SSF53335 19 256 1.11E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_03180 f05bc1a3f86935d627550fec7cd07a20 282 Gene3D G3DSA:1.10.8.10 6 85 2.8E-11 T 14-10-2018 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 SUPERFAMILY SSF75138 4 134 1.44E-34 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 309 39.053 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 Pfam PF07475 HPr Serine kinase C-terminal domain 133 301 3.3E-71 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 Gene3D G3DSA:3.40.1390.20 4 133 4.2E-33 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 SUPERFAMILY SSF53795 139 301 6.71E-40 T 14-10-2018 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 Gene3D G3DSA:3.40.50.300 134 319 5.0E-72 T 14-10-2018 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 Pfam PF02603 HPr Serine kinase N terminus 5 130 6.4E-37 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DKL56_02630 8c097ffbc5619f0fb667748b89ca15ec 320 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 304 7.0E-107 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DKL56_01205 96f7cffecd3b593552c90434b09bfdcf 262 Gene3D G3DSA:3.40.50.1820 4 256 5.0E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_01205 96f7cffecd3b593552c90434b09bfdcf 262 Pfam PF07859 alpha/beta hydrolase fold 32 121 6.7E-18 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DKL56_01205 96f7cffecd3b593552c90434b09bfdcf 262 SUPERFAMILY SSF53474 5 239 8.68E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.2E-50 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 Gene3D G3DSA:3.30.190.20 21 225 5.8E-82 T 14-10-2018 DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 Gene3D G3DSA:3.40.50.790 68 159 5.8E-82 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 PIRSF PIRSF002155 1 226 4.9E-78 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 226 5.1E-101 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.343 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 SUPERFAMILY SSF56808 6 225 1.06E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like DKL56_05670 4a8cbaff17b95e2f07cbf712a4aa6125 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 Pfam PF02384 N-6 DNA Methylase 98 316 1.3E-22 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 222 246 1.7E-8 T 14-10-2018 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 94 110 1.7E-8 T 14-10-2018 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 1.7E-8 T 14-10-2018 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 SUPERFAMILY SSF53335 8 314 6.75E-51 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 Gene3D G3DSA:1.10.150.470 1 85 6.0E-8 T 14-10-2018 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 Gene3D G3DSA:3.40.50.150 89 332 2.4E-53 T 14-10-2018 DKL56_02965 7a59794a0096c85a194caf51a20ca249 333 PIRSF PIRSF026567 1 333 7.3E-108 T 14-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Pfam PF07949 YbbR-like protein 54 134 4.6E-8 T 14-10-2018 IPR012505 YbbR-like DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Pfam PF07949 YbbR-like protein 249 308 2.2E-9 T 14-10-2018 IPR012505 YbbR-like DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Pfam PF07949 YbbR-like protein 142 227 8.8E-14 T 14-10-2018 IPR012505 YbbR-like DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Gene3D G3DSA:2.170.120.30 39 142 4.3E-22 T 14-10-2018 DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Gene3D G3DSA:2.170.120.40 143 230 1.7E-8 T 14-10-2018 DKL56_02830 6cb46ab668610c5f7fd1a66a2ac01fc7 324 Gene3D G3DSA:2.170.120.40 233 316 4.8E-14 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Gene3D G3DSA:3.90.1570.50 7 252 1.1E-38 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Gene3D G3DSA:1.20.58.910 704 785 1.3E-5 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Gene3D G3DSA:3.90.640.50 34 113 1.1E-38 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Gene3D G3DSA:3.40.50.300 458 703 6.4E-62 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Pfam PF04851 Type III restriction enzyme, res subunit 261 430 1.8E-29 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Gene3D G3DSA:3.40.50.300 260 457 8.4E-49 T 14-10-2018 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 SMART SM00487 257 460 3.6E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 204 5.6E-20 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 SUPERFAMILY SSF52540 395 672 5.76E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 SUPERFAMILY SSF52540 260 431 2.23E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02280 f70ab7e34ed3f3360b5030b6f7b13282 1002 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 705 991 4.5E-29 T 14-10-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal DKL56_07465 f441317d52174ab20ca3608e805e87b4 350 SUPERFAMILY SSF53850 32 348 2.46E-58 T 14-10-2018 DKL56_07465 f441317d52174ab20ca3608e805e87b4 350 Gene3D G3DSA:3.40.190.10 47 316 1.7E-90 T 14-10-2018 DKL56_07465 f441317d52174ab20ca3608e805e87b4 350 Gene3D G3DSA:3.40.190.10 137 344 1.7E-90 T 14-10-2018 DKL56_07465 f441317d52174ab20ca3608e805e87b4 350 Pfam PF13416 Bacterial extracellular solute-binding protein 50 311 4.7E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DKL56_07530 196b080f157ced2ab7f41a3629e4406a 299 Gene3D G3DSA:3.40.50.1820 5 299 2.2E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07530 196b080f157ced2ab7f41a3629e4406a 299 Pfam PF07859 alpha/beta hydrolase fold 68 263 1.1E-25 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DKL56_07530 196b080f157ced2ab7f41a3629e4406a 299 SUPERFAMILY SSF53474 33 278 1.62E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07450 6a7176a37a4c9331b3a735ca8610f6e2 417 Gene3D G3DSA:1.20.1250.20 229 413 1.4E-10 T 14-10-2018 DKL56_07450 6a7176a37a4c9331b3a735ca8610f6e2 417 SUPERFAMILY SSF103473 8 409 5.62E-36 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07450 6a7176a37a4c9331b3a735ca8610f6e2 417 Gene3D G3DSA:1.20.1250.20 3 201 6.3E-15 T 14-10-2018 DKL56_07450 6a7176a37a4c9331b3a735ca8610f6e2 417 Pfam PF07690 Major Facilitator Superfamily 18 263 2.8E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Hamap MF_01114 Regulatory protein RecX [recX]. 41 208 14.689 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Gene3D G3DSA:1.10.10.10 213 258 5.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Gene3D G3DSA:1.10.10.10 107 150 6.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Gene3D G3DSA:1.10.10.10 152 212 1.1E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Pfam PF02631 RecX family 83 203 1.9E-22 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DKL56_02420 0f75e9d22415b52a460e3b3f705d54a4 271 Gene3D G3DSA:1.10.10.2800 1 106 6.8E-30 T 14-10-2018 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Gene3D G3DSA:2.40.240.60 362 434 1.1E-18 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Pfam PF09269 Domain of unknown function (DUF1967) 364 432 4.1E-22 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Gene3D G3DSA:2.70.210.12 2 159 4.8E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 SUPERFAMILY SSF52540 152 335 2.65E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 PIRSF PIRSF002401 1 382 8.1E-137 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Pfam PF01018 GTP1/OBG 5 159 3.1E-59 T 14-10-2018 IPR006169 GTP1/OBG domain DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Gene3D G3DSA:3.40.50.300 160 347 1.2E-51 T 14-10-2018 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 SUPERFAMILY SSF82051 4 159 1.57E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 333 1.9E-136 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Hamap MF_01454 GTPase Obg [obg]. 3 334 46.142 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 SUPERFAMILY SSF102741 362 433 2.62E-20 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 3.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 3.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 3.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 3.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 364 433 1.8E-23 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DKL56_03605 5f41c896ee40708cb51ed172f7afd1a3 434 Pfam PF01926 50S ribosome-binding GTPase 162 283 7.3E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_06370 bc9dc1cb8dbfa9a83f13e2059b4bb4a3 284 Gene3D G3DSA:3.40.50.300 1 249 5.5E-61 T 14-10-2018 DKL56_06370 bc9dc1cb8dbfa9a83f13e2059b4bb4a3 284 SMART SM00382 27 199 5.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06370 bc9dc1cb8dbfa9a83f13e2059b4bb4a3 284 SUPERFAMILY SSF52540 2 211 1.92E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06370 bc9dc1cb8dbfa9a83f13e2059b4bb4a3 284 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06370 bc9dc1cb8dbfa9a83f13e2059b4bb4a3 284 Pfam PF00005 ABC transporter 19 148 3.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 Hamap MF_00015 LexA repressor [lexA]. 4 205 32.088 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 TIGRFAM TIGR00498 lexA: repressor LexA 6 205 1.7E-69 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 Pfam PF00717 Peptidase S24-like 123 190 1.7E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 Gene3D G3DSA:2.10.109.10 88 204 2.5E-41 T 14-10-2018 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 Pfam PF01726 LexA DNA binding domain 6 66 2.9E-20 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 SUPERFAMILY SSF51306 83 203 2.96E-35 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 Gene3D G3DSA:1.10.10.10 6 69 6.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 131 142 5.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 120 130 5.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 160 172 5.1E-9 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DKL56_04600 ecfafc52f37bf6d4c2ed06445f499da9 207 SUPERFAMILY SSF46785 6 70 1.15E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 3.6E-184 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 SMART SM00963 2 87 1.5E-32 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 3.7E-76 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 452 34.526 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 SUPERFAMILY SSF52540 43 354 2.55E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Gene3D G3DSA:3.40.50.300 91 286 8.5E-127 T 14-10-2018 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 SUPERFAMILY SSF47446 328 430 3.27E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Gene3D G3DSA:1.20.120.140 5 307 8.5E-127 T 14-10-2018 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Pfam PF02978 Signal peptide binding domain 328 427 1.6E-32 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Gene3D G3DSA:1.10.260.30 328 449 1.8E-43 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 SMART SM00382 100 248 6.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 SMART SM00962 101 297 2.3E-111 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04630 0bdeaa6a22b8fd3bffe1b5d8839c5328 475 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 9.2E-24 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 SUPERFAMILY SSF52540 303 529 4.53E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Pfam PF00005 ABC transporter 20 189 1.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Gene3D G3DSA:3.40.50.300 3 284 5.5E-69 T 14-10-2018 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Pfam PF00005 ABC transporter 340 469 2.6E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Pfam PF12848 ABC transporter 228 312 1.3E-26 T 14-10-2018 IPR032781 ABC-transporter extension domain DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Gene3D G3DSA:1.10.287.380 550 640 4.5E-6 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Pfam PF16326 ABC transporter C-terminal domain 571 633 3.1E-13 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 Gene3D G3DSA:3.40.50.300 286 549 1.1E-63 T 14-10-2018 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 SUPERFAMILY SSF52540 7 242 1.08E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 SMART SM00382 28 236 1.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05525 9148ac043a0f92d87f4cb22dd5987d0f 643 SMART SM00382 348 514 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05165 c07d6bae3ecb347882cae20442d3a204 215 Pfam PF01588 Putative tRNA binding domain 95 197 2.5E-21 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DKL56_05165 c07d6bae3ecb347882cae20442d3a204 215 Gene3D G3DSA:3.30.1940.10 18 91 1.4E-71 T 14-10-2018 IPR037154 YtpR-like superfamily DKL56_05165 c07d6bae3ecb347882cae20442d3a204 215 Pfam PF14794 Domain of unknown function (DUF4479) 20 89 5.2E-20 T 14-10-2018 IPR027855 Domain of unknown function DUF4479 DKL56_05165 c07d6bae3ecb347882cae20442d3a204 215 SUPERFAMILY SSF50249 88 199 1.66E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_05165 c07d6bae3ecb347882cae20442d3a204 215 Gene3D G3DSA:2.40.50.140 6 199 1.4E-71 T 14-10-2018 DKL56_03140 2f901d06785bff92669831af1d928170 204 Gene3D G3DSA:3.30.1450.10 125 203 5.9E-13 T 14-10-2018 IPR037873 BamE-like DKL56_03140 2f901d06785bff92669831af1d928170 204 Gene3D G3DSA:3.30.1450.10 39 122 5.2E-16 T 14-10-2018 IPR037873 BamE-like DKL56_03140 2f901d06785bff92669831af1d928170 204 Pfam PF12978 Domain of Unknown Function with PDB structure (DUF3862) 43 202 1.0E-29 T 14-10-2018 IPR024418 Protein of unknown function DUF3862 DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 451 8.6E-7 T 14-10-2018 DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 8.6E-7 T 14-10-2018 DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 SUPERFAMILY SSF51905 4 480 2.78E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 Pfam PF00890 FAD binding domain 8 449 1.3E-55 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 Gene3D G3DSA:3.90.700.10 238 412 1.4E-98 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 Gene3D G3DSA:3.50.50.60 7 463 1.4E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_06350 070137611c2f8fc6ed7068b2bf16f707 484 SUPERFAMILY SSF56425 270 420 7.33E-24 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 SUPERFAMILY SSF51445 279 525 1.35E-19 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 SUPERFAMILY SSF51011 529 620 4.75E-15 T 14-10-2018 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 SUPERFAMILY SSF49265 821 891 1.95E-10 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Gene3D G3DSA:2.60.40.1180 622 760 1.1E-25 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Gene3D G3DSA:2.60.40.10 816 892 5.3E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 SUPERFAMILY SSF74650 43 189 9.42E-21 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 SMART SM00060 809 881 4.2E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Gene3D G3DSA:3.20.20.80 349 561 7.0E-39 T 14-10-2018 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Pfam PF17137 Domain of unknown function (DUF5110) 646 712 3.2E-17 T 14-10-2018 IPR033403 Domain of unknown function DUF5110 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Gene3D G3DSA:2.60.40.1180 563 621 1.4E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Gene3D G3DSA:2.60.40.1760 1 202 1.1E-27 T 14-10-2018 DKL56_01420 a9a62649ac86c58431eca8798ea691d7 899 Pfam PF01055 Glycosyl hydrolases family 31 329 625 1.4E-46 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 SUPERFAMILY SSF52374 3 363 2.14E-111 T 14-10-2018 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Pfam PF01588 Putative tRNA binding domain 562 654 2.7E-22 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 SUPERFAMILY SSF47323 362 570 1.01E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 SUPERFAMILY SSF50249 555 656 4.16E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Gene3D G3DSA:2.40.50.140 546 657 7.0E-30 T 14-10-2018 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Gene3D G3DSA:3.40.50.620 7 345 2.4E-147 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Gene3D G3DSA:1.10.730.10 350 518 9.8E-45 T 14-10-2018 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 517 1.1E-174 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 519 49.06 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Pfam PF09334 tRNA synthetases class I (M) 7 372 3.7E-118 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Pfam PF08264 Anticodon-binding domain of tRNA 398 492 1.2E-6 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 Gene3D G3DSA:2.170.220.10 118 237 2.4E-147 T 14-10-2018 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 268 283 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 360 371 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_06625 00396ec6ab5f01cc2befef77ed30b812 658 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 524 654 4.3E-35 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 Pfam PF00271 Helicase conserved C-terminal domain 573 657 3.9E-8 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 Gene3D G3DSA:1.10.8.630 1 111 1.7E-21 T 14-10-2018 DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 SUPERFAMILY SSF52540 529 705 5.69E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 SUPERFAMILY SSF52540 261 441 9.72E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 Gene3D G3DSA:3.40.50.300 251 445 8.7E-75 T 14-10-2018 DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 SMART SM00490 561 658 1.3E-8 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 SMART SM00487 259 458 2.9E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 798 24.757 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 Pfam PF04851 Type III restriction enzyme, res subunit 261 426 2.7E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_04770 439ffc07970f6bab2523a72eca9b9dc0 799 TIGRFAM TIGR00595 priA: primosomal protein N' 287 795 2.9E-206 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DKL56_07750 1c09e85775d60906451ed352477f6301 241 Gene3D G3DSA:3.40.50.1360 1 235 1.4E-93 T 14-10-2018 DKL56_07750 1c09e85775d60906451ed352477f6301 241 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 26 223 1.5E-15 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DKL56_07750 1c09e85775d60906451ed352477f6301 241 SUPERFAMILY SSF100950 1 236 3.11E-80 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_07750 1c09e85775d60906451ed352477f6301 241 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 235 38.327 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DKL56_07750 1c09e85775d60906451ed352477f6301 241 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 114 132 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 PRINTS PR01002 Flagellar protein FlgJ signature 171 190 2.2E-6 T 14-10-2018 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 PRINTS PR01002 Flagellar protein FlgJ signature 191 209 2.2E-6 T 14-10-2018 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 PRINTS PR01002 Flagellar protein FlgJ signature 86 104 2.2E-6 T 14-10-2018 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 73 210 4.3E-25 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 Gene3D G3DSA:4.10.80.30 118 143 1.1E-47 T 14-10-2018 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 Gene3D G3DSA:1.10.530.10 67 214 1.1E-47 T 14-10-2018 DKL56_02165 c96397e1d5323c28be066e032e15ba56 215 SMART SM00047 57 214 1.4E-45 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Gene3D G3DSA:3.40.50.300 441 611 6.2E-55 T 14-10-2018 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Gene3D G3DSA:3.40.50.300 197 432 2.9E-85 T 14-10-2018 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Pfam PF00270 DEAD/DEAH box helicase 258 414 3.0E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 SMART SM00490 487 571 7.1E-23 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Pfam PF17191 RecG wedge domain 11 161 1.4E-14 T 14-10-2018 IPR033454 RecG, wedge domain DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 645 8.4E-218 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 SUPERFAMILY SSF52540 173 435 2.3E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 SMART SM00487 252 441 1.8E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Gene3D G3DSA:2.40.50.140 47 130 4.2E-9 T 14-10-2018 DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 Pfam PF00271 Helicase conserved C-terminal domain 455 570 1.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 SUPERFAMILY SSF50249 6 168 1.47E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04715 defa7fb9d5ebfbadb8d729c7a90f700c 678 SUPERFAMILY SSF52540 375 584 1.38E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Pfam PF00817 impB/mucB/samB family 15 173 1.6E-28 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Gene3D G3DSA:1.10.150.20 201 253 4.1E-11 T 14-10-2018 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Gene3D G3DSA:3.30.70.270 12 179 2.1E-28 T 14-10-2018 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Pfam PF11799 impB/mucB/samB family C-terminal domain 261 376 1.1E-14 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Gene3D G3DSA:2.30.40.20 29 90 2.1E-28 T 14-10-2018 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 SUPERFAMILY SSF56672 11 257 1.42E-47 T 14-10-2018 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 Gene3D G3DSA:3.30.1490.100 267 377 8.4E-13 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_06665 4403641fa20c53a12c2e8d057b509159 438 SUPERFAMILY SSF100879 267 380 3.14E-12 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_04855 f6ba72222f52047118cb5392f1c66bad 279 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 274 1.5E-14 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DKL56_04855 f6ba72222f52047118cb5392f1c66bad 279 Gene3D G3DSA:3.30.70.120 191 266 2.6E-10 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKL56_04855 f6ba72222f52047118cb5392f1c66bad 279 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 14 207 1.2E-50 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_04855 f6ba72222f52047118cb5392f1c66bad 279 PIRSF PIRSF006483 1 278 3.2E-65 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_01445 60cae39f533247dc3fa90bc606849066 633 SUPERFAMILY SSF52794 6 101 2.62E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 10 98 6.7E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 491 633 1.8E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_01445 60cae39f533247dc3fa90bc606849066 633 SUPERFAMILY SSF55804 488 633 2.75E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 116 454 5.9E-100 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 89 7.5E-28 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 Gene3D G3DSA:3.40.930.10 480 633 7.5E-43 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 Gene3D G3DSA:3.40.50.2300 1 105 1.4E-37 T 14-10-2018 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 492 618 2.7E-33 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DKL56_01445 60cae39f533247dc3fa90bc606849066 633 Pfam PF02378 Phosphotransferase system, EIIC 135 403 1.6E-10 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 3.0E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Gene3D G3DSA:3.10.310.40 767 876 4.5E-30 T 14-10-2018 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 6.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 6.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 301 314 6.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 277 293 6.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 6.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Gene3D G3DSA:3.30.54.20 626 679 1.6E-49 T 14-10-2018 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 SUPERFAMILY SSF55186 554 709 1.27E-45 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 858 7.1E-297 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 SUPERFAMILY SSF55681 5 245 1.99E-86 T 14-10-2018 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 SUPERFAMILY SSF50447 479 551 4.94E-13 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Gene3D G3DSA:3.30.930.10 3 241 2.0E-93 T 14-10-2018 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Pfam PF02272 DHHA1 domain 736 874 5.7E-23 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 SUPERFAMILY SSF101353 246 444 2.88E-65 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Gene3D G3DSA:2.40.30.130 480 554 1.7E-8 T 14-10-2018 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Pfam PF01411 tRNA synthetases class II (A) 8 556 4.4E-188 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 164.205 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 SMART SM00863 655 698 6.2E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DKL56_01570 6bb82ae3c8be48fe2714a91079219869 878 Gene3D G3DSA:3.30.980.10 565 699 1.6E-49 T 14-10-2018 DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 Pfam PF00270 DEAD/DEAH box helicase 19 178 2.3E-31 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 Gene3D G3DSA:3.40.50.300 202 412 5.4E-39 T 14-10-2018 DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 SMART SM00487 14 209 1.7E-35 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 Pfam PF00271 Helicase conserved C-terminal domain 219 325 1.8E-22 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 Gene3D G3DSA:3.40.50.300 2 195 1.9E-44 T 14-10-2018 DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 SUPERFAMILY SSF52540 65 344 2.85E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02330 6db181e17c7acc87f414c6e8370a4b48 413 SMART SM00490 220 325 2.5E-21 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SUPERFAMILY SSF55874 433 609 1.18E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 444 7.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Gene3D G3DSA:3.30.450.20 254 372 2.2E-19 T 14-10-2018 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SMART SM00388 377 444 6.5E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SMART SM00091 265 331 1.7E-6 T 14-10-2018 IPR000014 PAS domain DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Gene3D G3DSA:1.10.287.130 373 449 2.7E-29 T 14-10-2018 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Gene3D G3DSA:3.30.450.20 36 183 1.6E-20 T 14-10-2018 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 497 607 8.7E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SMART SM00304 206 258 5.1E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SUPERFAMILY SSF158472 207 255 6.02E-9 T 14-10-2018 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SUPERFAMILY SSF103190 83 181 9.81E-6 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DKL56_00465 632326c273053a3366ec53c1189e5a82 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 3.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 586 3.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 592 605 3.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 3.5E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SUPERFAMILY SSF47384 364 444 2.75E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Pfam PF00989 PAS fold 266 368 1.7E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Gene3D G3DSA:3.30.565.10 450 617 3.5E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Gene3D G3DSA:1.10.8.500 205 253 2.0E-6 T 14-10-2018 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 Pfam PF00672 HAMP domain 207 254 7.8E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SMART SM00387 496 608 2.9E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_00465 632326c273053a3366ec53c1189e5a82 618 SUPERFAMILY SSF55785 254 369 4.19E-11 T 14-10-2018 IPR035965 PAS domain superfamily DKL56_00760 dcbbe55ffd2a26746220f116d9daab87 608 Pfam PF02687 FtsX-like permease family 88 177 2.7E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DKL56_00760 dcbbe55ffd2a26746220f116d9daab87 608 PIRSF PIRSF018968 1 412 1.5E-41 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DKL56_00760 dcbbe55ffd2a26746220f116d9daab87 608 PIRSF PIRSF018968 370 601 4.7E-20 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 SUPERFAMILY SSF51395 2 302 3.1E-78 T 14-10-2018 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 242 262 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 PIRSF PIRSF000164 1 303 1.3E-78 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 304 37.707 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 Gene3D G3DSA:3.20.20.70 1 306 2.0E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 5 301 1.4E-98 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DKL56_04930 6ee344df96a9d80ee59f5a787575e4c6 307 Pfam PF01180 Dihydroorotate dehydrogenase 5 289 1.3E-75 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DKL56_01565 d334009585f4636bf1eb66dd252166c6 277 SUPERFAMILY SSF52402 4 271 3.7E-85 T 14-10-2018 DKL56_01565 d334009585f4636bf1eb66dd252166c6 277 Gene3D G3DSA:3.40.50.620 3 275 1.9E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_01565 d334009585f4636bf1eb66dd252166c6 277 TIGRFAM TIGR00552 nadE: NAD+ synthetase 19 275 5.7E-71 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DKL56_01565 d334009585f4636bf1eb66dd252166c6 277 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 269 48.198 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 DKL56_01565 d334009585f4636bf1eb66dd252166c6 277 Pfam PF02540 NAD synthase 24 266 5.3E-69 T 14-10-2018 IPR022310 NAD/GMP synthase DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 266 7.2E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 Gene3D G3DSA:3.40.50.1000 4 267 9.0E-67 T 14-10-2018 IPR023214 HAD superfamily DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 14-10-2018 DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 SUPERFAMILY SSF56784 2 270 4.03E-63 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 Gene3D G3DSA:3.30.1240.10 86 194 9.0E-67 T 14-10-2018 DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 266 1.7E-54 T 14-10-2018 DKL56_02845 34f1bc29887e59ee6761f6d1ebb8b597 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 234 1.3E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_02215 8845b0d58191a196b0645393260c112d 447 SUPERFAMILY SSF53335 70 446 5.98E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02215 8845b0d58191a196b0645393260c112d 447 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 86 446 2.6E-26 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DKL56_02215 8845b0d58191a196b0645393260c112d 447 Gene3D G3DSA:3.40.1350.30 125 279 6.1E-113 T 14-10-2018 DKL56_02215 8845b0d58191a196b0645393260c112d 447 Gene3D G3DSA:3.40.50.150 81 441 6.1E-113 T 14-10-2018 DKL56_02215 8845b0d58191a196b0645393260c112d 447 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 378 409 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DKL56_02215 8845b0d58191a196b0645393260c112d 447 Gene3D G3DSA:2.40.50.140 1 71 1.1E-19 T 14-10-2018 DKL56_02215 8845b0d58191a196b0645393260c112d 447 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 430 440 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DKL56_02215 8845b0d58191a196b0645393260c112d 447 Pfam PF01938 TRAM domain 4 55 1.3E-7 T 14-10-2018 IPR002792 TRAM domain DKL56_02215 8845b0d58191a196b0645393260c112d 447 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 14 440 5.5E-129 T 14-10-2018 DKL56_02215 8845b0d58191a196b0645393260c112d 447 SUPERFAMILY SSF50249 1 57 7.28E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_01920 a8f3d0765258f6f6e9c6bc1bff40ae92 150 Pfam PF03610 PTS system fructose IIA component 12 107 2.1E-15 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_01920 a8f3d0765258f6f6e9c6bc1bff40ae92 150 SUPERFAMILY SSF53062 10 140 3.01E-28 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01920 a8f3d0765258f6f6e9c6bc1bff40ae92 150 Gene3D G3DSA:3.40.50.510 9 150 9.1E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_00160 c13c6b12dde0dd278fe2d0c7d0b982eb 285 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 72 282 1.4E-17 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal DKL56_00160 c13c6b12dde0dd278fe2d0c7d0b982eb 285 SUPERFAMILY SSF47413 1 61 1.21E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_00160 c13c6b12dde0dd278fe2d0c7d0b982eb 285 Gene3D G3DSA:1.10.260.40 1 65 6.1E-10 T 14-10-2018 DKL56_00160 c13c6b12dde0dd278fe2d0c7d0b982eb 285 SMART SM00530 6 60 4.2E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_00160 c13c6b12dde0dd278fe2d0c7d0b982eb 285 Pfam PF01381 Helix-turn-helix 7 57 2.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_02670 298795a074f2d06749461a29b5706b08 292 Gene3D G3DSA:3.40.50.300 1 173 3.7E-8 T 14-10-2018 DKL56_02670 298795a074f2d06749461a29b5706b08 292 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 287 40.0 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DKL56_02670 298795a074f2d06749461a29b5706b08 292 SUPERFAMILY SSF52540 6 161 1.5E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02670 298795a074f2d06749461a29b5706b08 292 Pfam PF03668 P-loop ATPase protein family 7 287 3.4E-102 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DKL56_02670 298795a074f2d06749461a29b5706b08 292 PIRSF PIRSF005052 6 290 4.5E-104 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 TIGRFAM TIGR00016 ackA: acetate kinase 2 391 6.0E-154 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PIRSF PIRSF000722 1 394 3.8E-145 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 Gene3D G3DSA:3.30.420.40 2 195 6.5E-66 T 14-10-2018 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 Gene3D G3DSA:3.30.420.40 196 394 2.3E-79 T 14-10-2018 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 203 224 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 4 15 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 173 186 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 319 335 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 297 310 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 PRINTS PR00471 Acetate kinase family signature 372 384 2.8E-40 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 SUPERFAMILY SSF53067 157 390 4.17E-87 T 14-10-2018 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 Pfam PF00871 Acetokinase family 3 383 2.2E-144 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 Hamap MF_00020 Acetate kinase [ackA]. 1 394 174.388 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 SUPERFAMILY SSF53067 1 195 9.5E-61 T 14-10-2018 DKL56_02970 008e9b27badd9a95c9e6e427c397edd9 394 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DKL56_04190 585b6f5a1bbb7292285f721d936a3303 164 Pfam PF00578 AhpC/TSA family 19 140 3.5E-18 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DKL56_04190 585b6f5a1bbb7292285f721d936a3303 164 Gene3D G3DSA:3.40.30.10 1 163 1.3E-37 T 14-10-2018 DKL56_04190 585b6f5a1bbb7292285f721d936a3303 164 SUPERFAMILY SSF52833 3 158 7.85E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_05765 f4783c4312f717d4d25f525966bfa20a 60 Pfam PF03729 Short repeat of unknown function (DUF308) 7 55 1.7E-5 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane DKL56_06305 d3482364fa96f663cc65712f2a768144 81 ProSitePatterns PS01143 Ribosomal protein L31 signature. 48 69 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 Gene3D G3DSA:2.30.170.50 1 81 2.4E-27 T 14-10-2018 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 SUPERFAMILY SSF143800 1 79 1.69E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 Pfam PF01197 Ribosomal protein L31 1 78 5.6E-30 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.85 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 PRINTS PR01249 Ribosomal protein L31 signature 2 19 9.9E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 PRINTS PR01249 Ribosomal protein L31 signature 44 59 9.9E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 PRINTS PR01249 Ribosomal protein L31 signature 59 77 9.9E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06305 d3482364fa96f663cc65712f2a768144 81 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 78 4.2E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04590 a5dd8319d79c6ba6da45e95ef7b8242f 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 68 1.6E-30 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DKL56_04590 a5dd8319d79c6ba6da45e95ef7b8242f 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 22 62 7.0E-16 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DKL56_04590 a5dd8319d79c6ba6da45e95ef7b8242f 71 Hamap MF_00363 UPF0154 protein . 2 71 20.5 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DKL56_01000 1fa70a5bdcbe6fa3338d31e0792e5070 323 Pfam PF04392 ABC transporter substrate binding protein 36 315 1.9E-86 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DKL56_01000 1fa70a5bdcbe6fa3338d31e0792e5070 323 Gene3D G3DSA:3.40.50.2300 46 299 6.7E-88 T 14-10-2018 DKL56_01000 1fa70a5bdcbe6fa3338d31e0792e5070 323 SUPERFAMILY SSF53822 42 293 1.38E-15 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_01000 1fa70a5bdcbe6fa3338d31e0792e5070 323 Gene3D G3DSA:3.40.50.2300 149 317 6.7E-88 T 14-10-2018 DKL56_06990 1262101bcee8e91981167e0444a7201c 621 Pfam PF04205 FMN-binding domain 18 89 7.0E-7 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_06990 1262101bcee8e91981167e0444a7201c 621 SUPERFAMILY SSF56425 370 556 1.5E-16 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06990 1262101bcee8e91981167e0444a7201c 621 SUPERFAMILY SSF51905 111 618 9.81E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_06990 1262101bcee8e91981167e0444a7201c 621 Gene3D G3DSA:3.90.1010.20 17 105 1.1E-6 T 14-10-2018 DKL56_06990 1262101bcee8e91981167e0444a7201c 621 Pfam PF00890 FAD binding domain 117 590 6.9E-48 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06990 1262101bcee8e91981167e0444a7201c 621 SMART SM00900 18 92 4.0E-12 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 Gene3D G3DSA:4.10.520.10 3 93 8.4E-39 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 SMART SM00411 4 93 6.9E-46 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 PRINTS PR01727 Prokaryotic integration host factor signature 61 74 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 PRINTS PR01727 Prokaryotic integration host factor signature 77 91 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 PRINTS PR01727 Prokaryotic integration host factor signature 43 58 1.4E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 49 68 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 Pfam PF00216 Bacterial DNA-binding protein 5 93 8.0E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_04300 42dba1a334f500ccfed2bed44b02edda 93 SUPERFAMILY SSF47729 4 93 1.02E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 Pfam PF00005 ABC transporter 17 156 4.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 Pfam PF13732 Domain of unknown function (DUF4162) 210 291 8.8E-16 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 Gene3D G3DSA:3.40.50.300 1 234 1.7E-59 T 14-10-2018 DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 SMART SM00382 26 204 4.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00215 a2af0a54b319eaa85e4374efc3e1380a 298 SUPERFAMILY SSF52540 2 227 2.89E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Gene3D G3DSA:1.10.10.10 263 338 3.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Gene3D G3DSA:3.40.50.300 26 187 1.4E-38 T 14-10-2018 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 SUPERFAMILY SSF52540 26 257 4.76E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 15 241 1.4E-112 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 SUPERFAMILY SSF46785 263 336 7.07E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05475 46a759c2109fe7160b8309af296b078b 338 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 29 332 5.0E-137 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Gene3D G3DSA:1.10.8.60 188 261 1.3E-30 T 14-10-2018 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 338 159.555 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 257 333 9.0E-32 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DKL56_05475 46a759c2109fe7160b8309af296b078b 338 SMART SM00382 57 188 2.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05475 46a759c2109fe7160b8309af296b078b 338 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 259 332 2.0E-30 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DKL56_07205 2ff2ae527986279ec88d92af670a4abf 158 Gene3D G3DSA:3.40.50.450 2 158 5.4E-40 T 14-10-2018 DKL56_07205 2ff2ae527986279ec88d92af670a4abf 158 SUPERFAMILY SSF52309 4 158 4.88E-49 T 14-10-2018 DKL56_07205 2ff2ae527986279ec88d92af670a4abf 158 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 7 119 3.5E-19 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Pfam PF13538 UvrD-like helicase C-terminal domain 654 701 1.6E-17 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 SUPERFAMILY SSF52540 184 493 7.51E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Pfam PF13604 AAA domain 326 528 1.8E-43 T 14-10-2018 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Gene3D G3DSA:1.10.10.2220 186 289 4.6E-11 T 14-10-2018 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 SMART SM00382 339 496 5.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Gene3D G3DSA:3.40.50.300 310 722 2.8E-135 T 14-10-2018 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Gene3D G3DSA:3.40.50.300 493 716 2.8E-135 T 14-10-2018 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Gene3D G3DSA:2.30.30.940 579 654 2.8E-135 T 14-10-2018 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 4 725 1.7E-204 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 1 775 25.956 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 SUPERFAMILY SSF52540 446 722 6.76E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03470 a0d9c54c7a6bb1eabcb1c025a990805b 787 Pfam PF14490 Helix-hairpin-helix containing domain 147 235 2.0E-21 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Gene3D G3DSA:3.30.70.250 1 84 1.8E-30 T 14-10-2018 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 4.9E-14 T 14-10-2018 IPR001451 Hexapeptide repeat DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 3.1E-32 T 14-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 SUPERFAMILY SSF51161 90 223 5.89E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 43.749 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 2.5E-111 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 156 1.4E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DKL56_07510 e11aa94dbb6c0891d52924a6622a8085 236 Gene3D G3DSA:2.160.10.10 85 236 2.3E-49 T 14-10-2018 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Gene3D G3DSA:1.10.3210.10 348 503 9.6E-20 T 14-10-2018 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 SMART SM00471 355 461 2.4E-12 T 14-10-2018 IPR003607 HD/PDEase domain DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 SUPERFAMILY SSF54791 232 326 4.1E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Pfam PF12072 Domain of unknown function (DUF3552) 8 228 2.8E-57 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 SMART SM00322 231 298 8.8E-9 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Hamap MF_00335 Ribonuclease Y [rny]. 7 543 24.293 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 57 543 3.1E-208 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 TIGRFAM TIGR00277 HDIG: HDIG domain 355 432 4.9E-25 T 14-10-2018 IPR006675 HDIG domain DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Gene3D G3DSA:3.30.1370.10 229 325 8.0E-10 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Pfam PF01966 HD domain 360 477 2.6E-19 T 14-10-2018 IPR006674 HD domain DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 Pfam PF00013 KH domain 237 293 8.3E-8 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DKL56_02585 51c3fd258b1e5dc49b1b8755151961aa 543 SUPERFAMILY SSF109604 342 493 4.61E-29 T 14-10-2018 DKL56_04980 9f9b7456949f0ba18cef9901e9af8c0f 190 Gene3D G3DSA:3.40.50.10420 1 190 2.0E-40 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DKL56_04980 9f9b7456949f0ba18cef9901e9af8c0f 190 PIRSF PIRSF006806 1 187 8.6E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DKL56_04980 9f9b7456949f0ba18cef9901e9af8c0f 190 SUPERFAMILY SSF100950 1 188 6.0E-37 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_04980 9f9b7456949f0ba18cef9901e9af8c0f 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 184 3.2E-27 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DKL56_04980 9f9b7456949f0ba18cef9901e9af8c0f 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 184 3.9E-35 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 Gene3D G3DSA:3.40.50.1860 107 218 9.0E-51 T 14-10-2018 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 SUPERFAMILY SSF53681 121 229 7.36E-19 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 Gene3D G3DSA:3.40.50.1860 7 224 9.0E-51 T 14-10-2018 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 SUPERFAMILY SSF53681 5 111 1.26E-25 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 233 1.2E-59 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 224 1.3E-53 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_00980 face2c39a90c5ef10e19d39617210f4c 248 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 81 89 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_03900 7759ad33ea8b9284ae5420a29a45e1b0 137 SMART SM00347 16 117 9.6E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_03900 7759ad33ea8b9284ae5420a29a45e1b0 137 Gene3D G3DSA:1.10.10.10 3 137 9.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03900 7759ad33ea8b9284ae5420a29a45e1b0 137 SUPERFAMILY SSF46785 11 132 2.59E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Gene3D G3DSA:2.40.33.10 70 169 3.1E-174 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 475 1.0E-169 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Pfam PF00224 Pyruvate kinase, barrel domain 1 345 2.2E-150 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 SUPERFAMILY SSF52935 350 548 2.14E-44 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 314 330 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 187 201 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 245 269 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 270 294 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 218 244 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 PRINTS PR01050 Pyruvate kinase family signature 295 313 1.7E-67 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Pfam PF00391 PEP-utilising enzyme, mobile domain 508 579 5.4E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 SUPERFAMILY SSF51621 1 342 1.85E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 472 1.4E-37 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Gene3D G3DSA:3.40.1380.20 337 472 3.1E-174 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 SUPERFAMILY SSF50800 71 168 2.09E-22 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Gene3D G3DSA:3.20.20.60 2 336 3.1E-174 T 14-10-2018 DKL56_03655 825c2304b1d1ac5bff3c6f2df90504f3 589 Gene3D G3DSA:3.50.30.10 478 589 6.6E-35 T 14-10-2018 DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 Gene3D G3DSA:3.40.1190.20 3 281 7.1E-76 T 14-10-2018 IPR029056 Ribokinase-like DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 280 22.891 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 10 276 3.0E-59 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 SUPERFAMILY SSF53613 7 277 1.16E-63 T 14-10-2018 IPR029056 Ribokinase-like DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 217 227 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DKL56_05310 c3225d1b33e07ead38bd44dc28a2b47f 281 Pfam PF01256 Carbohydrate kinase 28 272 2.3E-56 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 Gene3D G3DSA:3.30.1240.10 82 187 7.4E-63 T 14-10-2018 DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 229 2.2E-19 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 Gene3D G3DSA:3.40.50.1000 5 255 7.4E-63 T 14-10-2018 IPR023214 HAD superfamily DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 257 2.8E-50 T 14-10-2018 DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 254 1.8E-42 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_04030 e582ea5b84957814e03e3a0879dd455c 262 SUPERFAMILY SSF56784 1 261 1.41E-57 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 4 209 1.1E-85 T 14-10-2018 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 Pfam PF00005 ABC transporter 18 165 3.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 Gene3D G3DSA:3.40.50.300 1 210 2.7E-60 T 14-10-2018 DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 SUPERFAMILY SSF52540 1 209 3.64E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 SMART SM00382 26 210 2.0E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00055 7604f53f79d9970249f3ff86255675ef 210 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 7 238 37.084 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 9 237 4.3E-77 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 Pfam PF01255 Putative undecaprenyl diphosphate synthase 14 237 7.5E-79 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 SUPERFAMILY SSF64005 9 232 1.44E-80 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DKL56_04520 036b6458b033ffd664dfe053a2a0673d 244 Gene3D G3DSA:3.40.1180.10 1 239 2.7E-91 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DKL56_02075 8952e5d9c6354ebd90cf631ff7deea0b 271 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 222 235 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DKL56_02075 8952e5d9c6354ebd90cf631ff7deea0b 271 SUPERFAMILY SSF53613 1 265 9.51E-47 T 14-10-2018 IPR029056 Ribokinase-like DKL56_02075 8952e5d9c6354ebd90cf631ff7deea0b 271 Pfam PF00294 pfkB family carbohydrate kinase 14 263 9.3E-33 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DKL56_02075 8952e5d9c6354ebd90cf631ff7deea0b 271 Gene3D G3DSA:3.40.1190.20 1 270 4.9E-46 T 14-10-2018 IPR029056 Ribokinase-like DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Pfam PF13932 GidA associated domain 405 618 2.4E-77 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 163 2.8E-6 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.8E-6 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Gene3D G3DSA:3.50.50.60 3 226 3.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Gene3D G3DSA:3.50.50.60 306 462 1.4E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Pfam PF01134 Glucose inhibited division protein A 11 402 6.6E-168 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 SUPERFAMILY SSF51905 10 265 1.02E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 8 627 41.557 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Gene3D G3DSA:1.10.150.570 572 624 3.1E-22 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.1E-5 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.1E-5 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 Gene3D G3DSA:1.10.10.1800 463 553 3.8E-18 T 14-10-2018 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 277 291 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 372 395 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 10 624 2.2E-274 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DKL56_07825 80f2d2121aa1ac89107458cf9a4bdfad 631 SMART SM01228 549 620 1.1E-38 T 14-10-2018 DKL56_01900 7a39e41fd0050bc1779fbe8f2881deb1 162 Pfam PF06172 Cupin superfamily (DUF985) 5 139 5.6E-44 T 14-10-2018 IPR009327 Cupin domain of unknown function DUF985 DKL56_01900 7a39e41fd0050bc1779fbe8f2881deb1 162 Gene3D G3DSA:2.60.120.10 1 160 7.0E-61 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DKL56_01900 7a39e41fd0050bc1779fbe8f2881deb1 162 SUPERFAMILY SSF51182 2 160 1.78E-57 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 94 123 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 211 239 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 166 195 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 299 316 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 245 274 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 PRINTS PR00142 RecA protein signature 128 157 1.7E-82 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 Gene3D G3DSA:3.30.250.10 270 348 1.1E-28 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 Gene3D G3DSA:3.40.50.300 27 269 4.8E-78 T 14-10-2018 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 SUPERFAMILY SSF52540 6 269 2.95E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 SUPERFAMILY SSF54752 271 329 4.19E-22 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 326 2.2E-164 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 SMART SM00382 58 229 3.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 Hamap MF_00268 Protein RecA [recA]. 6 331 51.523 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DKL56_02580 bb43cfd4c51adb489cf9a88dcad6d2de 370 Pfam PF00154 recA bacterial DNA recombination protein 9 270 4.7E-136 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DKL56_04865 4d991b3a5f18f76cfc7da418bc91c2f4 596 Pfam PF09972 Predicted membrane protein (DUF2207) 35 527 5.0E-92 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 Gene3D G3DSA:3.30.70.260 127 198 9.8E-70 T 14-10-2018 DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 6 228 29.417 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 Gene3D G3DSA:3.40.50.1360 10 218 9.8E-70 T 14-10-2018 DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 SUPERFAMILY SSF75445 133 210 3.14E-21 T 14-10-2018 DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 9 224 9.8E-72 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 SUPERFAMILY SSF100950 5 149 2.59E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_01995 f551f375f0e00580729f774cc5e9392f 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 56 223 1.8E-54 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 SUPERFAMILY SSF52540 351 592 1.33E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 Gene3D G3DSA:3.40.50.300 353 596 2.6E-90 T 14-10-2018 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 SMART SM00382 382 568 9.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 Pfam PF00664 ABC transporter transmembrane region 38 310 1.6E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 Gene3D G3DSA:1.20.1560.10 4 340 8.1E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 SUPERFAMILY SSF90123 20 341 5.23E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_04580 e2f96541adb0af507c51c7de7aa11f2a 596 Pfam PF00005 ABC transporter 373 522 3.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00435 a80d2d4e8f66faa0c7ffbfa5df445364 285 Pfam PF13349 Putative adhesin 55 284 2.6E-23 T 14-10-2018 IPR025164 Putative adhesin DKL56_00435 a80d2d4e8f66faa0c7ffbfa5df445364 285 Gene3D G3DSA:2.160.20.120 38 221 4.0E-7 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 SUPERFAMILY SSF53067 6 190 1.18E-39 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Gene3D G3DSA:3.30.420.40 191 345 1.2E-73 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Pfam PF02491 SHS2 domain inserted in FTSA 84 155 3.4E-12 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 366 3.7E-73 T 14-10-2018 IPR020823 Cell division protein FtsA DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 SUPERFAMILY SSF53067 193 364 5.99E-34 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 SMART SM00842 7 190 2.6E-56 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Pfam PF14450 Cell division protein FtsA 201 362 1.0E-16 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Gene3D G3DSA:3.30.1490.110 77 163 1.2E-73 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 451 22.572 T 14-10-2018 IPR020823 Cell division protein FtsA DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 PIRSF PIRSF003101 1 451 4.1E-103 T 14-10-2018 IPR020823 Cell division protein FtsA DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Gene3D G3DSA:3.90.640.10 229 294 1.2E-73 T 14-10-2018 DKL56_03390 e9bcee919ee10cb155985b06df2bbfac 452 Gene3D G3DSA:3.30.420.40 10 359 1.2E-73 T 14-10-2018 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 Pfam PF00213 ATP synthase delta (OSCP) subunit 10 178 3.6E-46 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 10 178 4.4E-33 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 Gene3D G3DSA:1.10.520.20 8 100 3.8E-13 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 140 159 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 Hamap MF_01416 ATP synthase subunit delta [atpD]. 4 180 18.501 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 PRINTS PR00125 ATP synthase delta subunit signature 138 153 2.4E-19 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 PRINTS PR00125 ATP synthase delta subunit signature 153 171 2.4E-19 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 PRINTS PR00125 ATP synthase delta subunit signature 8 27 2.4E-19 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 PRINTS PR00125 ATP synthase delta subunit signature 76 87 2.4E-19 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03210 7250a717c9684f67ff3f41006a435667 182 SUPERFAMILY SSF47928 8 107 1.57E-20 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 SUPERFAMILY SSF51182 1 316 2.01E-97 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 Pfam PF01238 Phosphomannose isomerase type I 5 197 2.5E-29 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 100 316 7.1E-37 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 Gene3D G3DSA:2.60.120.10 1 225 8.9E-89 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 Gene3D G3DSA:2.60.120.10 227 317 1.1E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DKL56_03020 c242d67d70c0d9ff6983a4b37b2be3a7 322 PIRSF PIRSF036894 1 319 8.8E-119 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Gene3D G3DSA:3.30.50.30 3 50 2.5E-19 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 SMART SM00382 108 258 3.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 305 5.5E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Gene3D G3DSA:3.40.50.300 54 309 1.6E-106 T 14-10-2018 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 406 5.4E-194 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 SMART SM01086 311 406 1.1E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.3E-17 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 SMART SM00994 10 49 1.2E-19 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 3 409 50.298 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 390 2.4E-16 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 SUPERFAMILY SSF52540 60 396 1.86E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 SUPERFAMILY SSF57716 11 46 1.57E-10 T 14-10-2018 DKL56_03590 1aa38fa699f215594b37645b0a7e7c26 423 Gene3D G3DSA:1.10.8.60 310 418 7.9E-37 T 14-10-2018 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 4 237 4.0E-78 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 Gene3D G3DSA:3.10.290.10 1 62 5.9E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 SUPERFAMILY SSF55174 3 68 1.62E-6 T 14-10-2018 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 Gene3D G3DSA:3.40.50.150 63 269 4.2E-81 T 14-10-2018 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 SMART SM00363 3 69 2.8E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 SUPERFAMILY SSF53335 51 246 2.33E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 PIRSF PIRSF005578 1 265 4.0E-97 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DKL56_04800 57dcb881a61a2fb727ce87237b614163 269 Pfam PF01728 FtsJ-like methyltransferase 60 243 6.3E-20 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 8.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 8.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 8.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 8.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 Gene3D G3DSA:1.10.10.10 2 181 6.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 Pfam PF12802 MarR family 33 85 9.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 SMART SM00347 20 123 8.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02150 1543409d0a8388fefa3a2afbedf6d170 228 SUPERFAMILY SSF46785 9 142 1.16E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01560 08e59334b730d1138b5475a4922a0888 492 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 13 469 2.3E-177 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 PIRSF PIRSF000484 5 484 9.8E-153 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 SUPERFAMILY SSF54675 10 142 1.93E-47 T 14-10-2018 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 339 1.9E-7 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 Gene3D G3DSA:3.20.140.10 14 474 6.5E-196 T 14-10-2018 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 SUPERFAMILY SSF51690 144 483 9.86E-125 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DKL56_01560 08e59334b730d1138b5475a4922a0888 492 Gene3D G3DSA:3.20.20.70 155 322 6.5E-196 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 919 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 SUPERFAMILY SSF52540 608 908 2.15E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 ProSitePatterns PS00211 ABC transporters family signature. 483 497 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 ProSitePatterns PS00211 ABC transporters family signature. 824 838 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Pfam PF00005 ABC transporter 618 854 1.1E-11 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:1.20.1580.10 92 488 3.9E-247 T 14-10-2018 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:3.30.190.20 132 241 3.9E-247 T 14-10-2018 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:3.40.50.300 608 930 2.2E-143 T 14-10-2018 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 SMART SM00382 627 900 0.0033 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:1.10.8.280 286 399 3.9E-247 T 14-10-2018 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:1.20.1580.10 687 824 2.2E-143 T 14-10-2018 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 934 22.564 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 SUPERFAMILY SSF52540 9 565 3.06E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02660 00a46aba13e73f00391b53aa093ab88c 950 Gene3D G3DSA:3.40.50.300 7 591 3.9E-247 T 14-10-2018 DKL56_05750 8e09674843f7245df595798f54c36264 388 Pfam PF08544 GHMP kinases C terminal 286 366 5.4E-16 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DKL56_05750 8e09674843f7245df595798f54c36264 388 Gene3D G3DSA:3.30.70.890 202 362 9.0E-133 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_05750 8e09674843f7245df595798f54c36264 388 Gene3D G3DSA:3.30.230.10 21 201 9.0E-133 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_05750 8e09674843f7245df595798f54c36264 388 Pfam PF00288 GHMP kinases N terminal domain 115 180 9.7E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DKL56_05750 8e09674843f7245df595798f54c36264 388 TIGRFAM TIGR00131 gal_kin: galactokinase 4 384 7.5E-116 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00959 Mevalonate kinase family signature 333 350 4.7E-43 T 14-10-2018 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00959 Mevalonate kinase family signature 162 181 4.7E-43 T 14-10-2018 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00959 Mevalonate kinase family signature 24 48 4.7E-43 T 14-10-2018 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00959 Mevalonate kinase family signature 119 141 4.7E-43 T 14-10-2018 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00473 Galactokinase signature 112 130 8.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00473 Galactokinase signature 91 102 8.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00473 Galactokinase signature 269 283 8.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 PRINTS PR00473 Galactokinase signature 26 44 8.8E-27 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 SUPERFAMILY SSF55060 206 386 1.76E-54 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DKL56_05750 8e09674843f7245df595798f54c36264 388 Hamap MF_00246 Galactokinase [galK]. 24 386 47.644 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 PIRSF PIRSF000530 1 388 4.2E-123 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 SUPERFAMILY SSF54211 4 203 4.33E-60 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_05750 8e09674843f7245df595798f54c36264 388 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05750 8e09674843f7245df595798f54c36264 388 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DKL56_05750 8e09674843f7245df595798f54c36264 388 Pfam PF10509 Galactokinase galactose-binding signature 9 57 1.6E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 83 13.414 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 81 5.3E-19 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 Gene3D G3DSA:1.20.58.110 1 83 4.4E-22 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 Pfam PF01649 Ribosomal protein S20 2 81 1.9E-21 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 SUPERFAMILY SSF46992 4 83 3.79E-22 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03560 e87741685a9d59261890b7d3a689ce63 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 20 79 5.0E-11 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 SUPERFAMILY SSF50104 2 78 3.65E-25 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 SMART SM00739 2 29 1.5E-5 T 14-10-2018 IPR005824 KOW DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 Pfam PF00467 KOW motif 6 36 1.1E-8 T 14-10-2018 IPR005824 KOW DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 83 16.857 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 Gene3D G3DSA:2.30.30.1090 1 68 1.5E-26 T 14-10-2018 DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 80 3.0E-12 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06095 4a9d66554a474a999f5f52e5c5506342 83 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 79 1.6E-24 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Pfam PF16658 Class II release factor RF3, C-terminal domain 386 509 1.1E-41 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.4E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 PRINTS PR00315 GTP-binding elongation factor signature 100 111 4.4E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 PRINTS PR00315 GTP-binding elongation factor signature 64 72 4.4E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 PRINTS PR00315 GTP-binding elongation factor signature 136 145 4.4E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 PRINTS PR00315 GTP-binding elongation factor signature 84 94 4.4E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 SUPERFAMILY SSF50447 258 389 9.66E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 523 47.442 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 SUPERFAMILY SSF54980 392 463 1.8E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 SUPERFAMILY SSF52540 8 274 1.06E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Gene3D G3DSA:3.40.50.300 13 377 3.3E-96 T 14-10-2018 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 520 1.3E-191 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 147 1.6E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Gene3D G3DSA:3.40.50.300 20 272 3.3E-96 T 14-10-2018 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Pfam PF00009 Elongation factor Tu GTP binding domain 11 274 6.4E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_02440 14194e989fcf8f6d40c962400ecf1add 523 Gene3D G3DSA:3.30.70.3280 389 523 4.7E-45 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DKL56_00965 83089a1fcebf4006409dba8959070adc 228 Gene3D G3DSA:1.10.10.10 130 228 4.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00965 83089a1fcebf4006409dba8959070adc 228 SMART SM00448 1 112 4.2E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 Gene3D G3DSA:3.40.50.2300 1 129 1.6E-35 T 14-10-2018 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 2.1E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 SMART SM00862 150 226 1.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 Pfam PF00072 Response regulator receiver domain 3 112 1.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 SUPERFAMILY SSF46894 126 226 3.68E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DKL56_00965 83089a1fcebf4006409dba8959070adc 228 SUPERFAMILY SSF52172 1 122 4.27E-37 T 14-10-2018 IPR011006 CheY-like superfamily DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Gene3D G3DSA:3.80.10.10 248 364 5.0E-6 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 405 428 5.4E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 178 200 1.7E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 150 175 1.3E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 259 274 6.2E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 379 404 3.0E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 201 225 2.2E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 327 352 1.0E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 303 326 5.1E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 230 250 3.0E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 276 301 2.7E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 431 455 7.7E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Gene3D G3DSA:3.80.10.10 367 534 1.2E-15 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 482 528 0.15 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 121 231 5.7E-22 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 309 412 3.3E-24 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 Gene3D G3DSA:3.80.10.10 115 247 1.3E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00570 286764bd14a3a6f9df96e9d910733b3b 617 SUPERFAMILY SSF52058 136 532 1.09E-24 T 14-10-2018 DKL56_00640 5e3bffccebdde86b3ca330afdbddd2f1 310 Gene3D G3DSA:3.40.50.1820 63 306 2.9E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00640 5e3bffccebdde86b3ca330afdbddd2f1 310 SUPERFAMILY SSF53474 69 306 7.75E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00640 5e3bffccebdde86b3ca330afdbddd2f1 310 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 64 306 4.8E-43 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like DKL56_01855 07fcec0b910f423f45d50cbcefaeec3e 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 1.3E-19 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DKL56_01855 07fcec0b910f423f45d50cbcefaeec3e 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 1.1E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DKL56_01855 07fcec0b910f423f45d50cbcefaeec3e 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DKL56_01855 07fcec0b910f423f45d50cbcefaeec3e 77 PRINTS PR01651 Protein-export SecG membrane protein signature 55 77 5.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DKL56_01855 07fcec0b910f423f45d50cbcefaeec3e 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.1E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DKL56_00765 ff2b9a77727a8eb1cb2857fb7f6e99f7 603 Pfam PF02687 FtsX-like permease family 88 180 6.5E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DKL56_00765 ff2b9a77727a8eb1cb2857fb7f6e99f7 603 PIRSF PIRSF018968 1 445 1.4E-41 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DKL56_00765 ff2b9a77727a8eb1cb2857fb7f6e99f7 603 PIRSF PIRSF018968 422 603 2.2E-21 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DKL56_02730 eb77df0a1a6b3b94dc644896ccd9fbd0 343 Gene3D G3DSA:3.40.50.1360 96 343 4.9E-67 T 14-10-2018 DKL56_02730 eb77df0a1a6b3b94dc644896ccd9fbd0 343 Pfam PF04198 Putative sugar-binding domain 90 341 1.4E-62 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DKL56_02730 eb77df0a1a6b3b94dc644896ccd9fbd0 343 SUPERFAMILY SSF46785 20 84 1.66E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02730 eb77df0a1a6b3b94dc644896ccd9fbd0 343 SUPERFAMILY SSF100950 96 340 1.09E-53 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_02730 eb77df0a1a6b3b94dc644896ccd9fbd0 343 Gene3D G3DSA:1.10.10.10 17 89 1.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Hamap MF_00201 DNA repair protein RecO [recO]. 4 247 25.292 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 SUPERFAMILY SSF57863 84 236 4.71E-38 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Pfam PF02565 Recombination protein O C terminal 87 241 5.7E-32 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Pfam PF11967 Recombination protein O N terminal 6 82 7.0E-17 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Gene3D G3DSA:1.20.1440.120 92 227 8.8E-15 T 14-10-2018 DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 SUPERFAMILY SSF50249 6 81 8.05E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Gene3D G3DSA:2.40.50.140 1 85 4.7E-9 T 14-10-2018 DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 Gene3D G3DSA:3.30.60.100 150 189 8.8E-15 T 14-10-2018 DKL56_04135 741f5caeb5ed6da53d23cbe49bf76fe5 251 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 247 4.1E-53 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 448 6.2E-113 T 14-10-2018 DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 Gene3D G3DSA:2.40.50.140 1 79 2.1E-17 T 14-10-2018 DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 SUPERFAMILY SSF53335 74 455 1.01E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 95 456 4.1E-17 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 389 420 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 Pfam PF01938 TRAM domain 17 65 8.0E-8 T 14-10-2018 IPR002792 TRAM domain DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 SUPERFAMILY SSF50249 7 65 3.83E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 Gene3D G3DSA:3.40.50.150 88 452 7.4E-95 T 14-10-2018 DKL56_02415 f08fdd9dd00fd6d84751515e06dc66e1 458 Gene3D G3DSA:3.40.1350.30 136 290 7.4E-95 T 14-10-2018 DKL56_03465 279aa16783961e6a1be9e1f9f16140d9 216 Pfam PF13176 Tetratricopeptide repeat 131 153 0.011 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03465 279aa16783961e6a1be9e1f9f16140d9 216 SUPERFAMILY SSF48452 30 193 5.26E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03465 279aa16783961e6a1be9e1f9f16140d9 216 Pfam PF14559 Tetratricopeptide repeat 43 97 5.6E-11 T 14-10-2018 DKL56_03465 279aa16783961e6a1be9e1f9f16140d9 216 Gene3D G3DSA:1.25.40.10 32 94 2.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03465 279aa16783961e6a1be9e1f9f16140d9 216 Gene3D G3DSA:1.25.40.10 95 215 8.9E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 SUPERFAMILY SSF56059 129 349 2.05E-51 T 14-10-2018 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 347 38.403 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Gene3D G3DSA:3.30.1490.20 152 217 4.0E-24 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 PIRSF PIRSF039102 2 355 8.1E-114 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Gene3D G3DSA:3.40.50.20 1 142 5.9E-33 T 14-10-2018 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 SUPERFAMILY SSF52440 4 128 1.34E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Pfam PF07478 D-ala D-ala ligase C-terminus 136 344 1.2E-66 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 7 346 1.2E-98 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Pfam PF01820 D-ala D-ala ligase N-terminus 7 118 2.1E-25 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00695 7ba2e2dbe63340ea69698f8a31dff711 361 Gene3D G3DSA:3.30.470.20 218 361 2.1E-46 T 14-10-2018 DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 Gene3D G3DSA:3.40.50.300 3 291 7.9E-83 T 14-10-2018 DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 Pfam PF00005 ABC transporter 27 179 2.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 SUPERFAMILY SSF52540 5 251 2.24E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 264 3.4E-8 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_02105 8849fc06bd0dc27c3333748352872a0c 299 SMART SM00382 35 229 7.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04075 ca26b2dd76397c089e3398b5056c86be 234 Pfam PF00005 ABC transporter 20 155 4.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04075 ca26b2dd76397c089e3398b5056c86be 234 SMART SM00382 29 204 7.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04075 ca26b2dd76397c089e3398b5056c86be 234 SUPERFAMILY SSF52540 3 221 1.41E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04075 ca26b2dd76397c089e3398b5056c86be 234 Gene3D G3DSA:3.40.50.300 1 230 1.6E-42 T 14-10-2018 DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 Hamap MF_01145 Foldase protein PrsA [prsA]. 6 292 23.073 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 SUPERFAMILY SSF109998 28 172 1.08E-21 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 SUPERFAMILY SSF54534 128 234 1.24E-24 T 14-10-2018 DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 Gene3D G3DSA:3.10.50.40 141 234 1.6E-25 T 14-10-2018 DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 Pfam PF13616 PPIC-type PPIASE domain 144 234 5.0E-18 T 14-10-2018 DKL56_05200 b6ceee61ab956f915354b3704535ba48 299 Gene3D G3DSA:1.10.4030.10 29 128 9.2E-7 T 14-10-2018 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Gene3D G3DSA:3.80.10.10 338 449 3.0E-9 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Gene3D G3DSA:3.80.10.10 163 337 3.5E-22 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 SUPERFAMILY SSF52047 174 441 2.12E-25 T 14-10-2018 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Pfam PF13306 Leucine rich repeats (6 copies) 347 388 0.026 T 14-10-2018 IPR026906 Leucine rich repeat 5 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 227 326 2.6E-22 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Pfam PF06458 MucBP domain 496 559 7.9E-10 T 14-10-2018 IPR009459 MucBP domain DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Pfam PF06458 MucBP domain 574 635 2.1E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Gene3D G3DSA:3.10.20.320 491 569 4.0E-13 T 14-10-2018 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 Gene3D G3DSA:3.10.20.320 570 647 3.1E-25 T 14-10-2018 DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 294 318 3.4E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 190 215 8.2E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 216 241 2.5E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 242 267 2.1E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07325 ef2626ed302bd2032ca8fbc99e546a1e 736 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 268 292 5.8E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_03710 46d608261796f3b6ad8fdd5a6215e023 224 SUPERFAMILY SSF52540 2 217 5.49E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03710 46d608261796f3b6ad8fdd5a6215e023 224 Pfam PF02224 Cytidylate kinase 3 218 3.7E-71 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DKL56_03710 46d608261796f3b6ad8fdd5a6215e023 224 Hamap MF_00238 Cytidylate kinase [cmk]. 1 221 32.398 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DKL56_03710 46d608261796f3b6ad8fdd5a6215e023 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 216 1.7E-75 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DKL56_03710 46d608261796f3b6ad8fdd5a6215e023 224 Gene3D G3DSA:3.40.50.300 1 220 2.6E-79 T 14-10-2018 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 Pfam PF00186 Dihydrofolate reductase 1 166 1.1E-50 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 PIRSF PIRSF000194 1 169 4.0E-47 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 Gene3D G3DSA:3.40.430.10 1 169 3.9E-45 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 PRINTS PR00070 Dihydrofolate reductase signature 98 112 4.9E-13 T 14-10-2018 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 PRINTS PR00070 Dihydrofolate reductase signature 13 23 4.9E-13 T 14-10-2018 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 PRINTS PR00070 Dihydrofolate reductase signature 40 51 4.9E-13 T 14-10-2018 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 PRINTS PR00070 Dihydrofolate reductase signature 27 35 4.9E-13 T 14-10-2018 DKL56_04325 51ab6eb492ab145052a65b8e1abec2f9 169 SUPERFAMILY SSF53597 1 167 7.29E-48 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 TIGRFAM TIGR00492 alr: alanine racemase 8 373 1.7E-106 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 SUPERFAMILY SSF51419 13 248 2.45E-63 T 14-10-2018 IPR029066 PLP-binding barrel DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 SUPERFAMILY SSF50621 244 374 8.02E-45 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 47 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 SMART SM01005 249 374 2.8E-54 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 Pfam PF01168 Alanine racemase, N-terminal domain 13 231 3.0E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 Hamap MF_01201 Alanine racemase. 6 374 32.633 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 Gene3D G3DSA:2.40.37.10 13 371 2.0E-121 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 204 231 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 302 319 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 265 280 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 282 297 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 68 86 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 129 141 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 356 369 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 32 48 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 PRINTS PR00992 Alanine racemase signature 164 175 5.3E-61 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 Pfam PF00842 Alanine racemase, C-terminal domain 249 373 1.0E-36 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DKL56_06285 70d83a8d5a782fca86b7e7342b009f2b 376 Gene3D G3DSA:3.20.20.10 15 235 2.0E-121 T 14-10-2018 IPR029066 PLP-binding barrel DKL56_07175 64bc624f002024cafaac335745276add 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 21 265 8.7E-89 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DKL56_07175 64bc624f002024cafaac335745276add 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 256 4.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_07175 64bc624f002024cafaac335745276add 267 SUPERFAMILY SSF161098 71 258 1.31E-38 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07175 64bc624f002024cafaac335745276add 267 Gene3D G3DSA:1.10.3720.10 66 265 6.2E-34 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 SUPERFAMILY SSF46565 2 102 2.36E-34 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 SUPERFAMILY SSF57938 138 217 3.53E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Pfam PF00226 DnaJ domain 5 66 4.3E-26 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Gene3D G3DSA:2.60.260.20 263 362 1.2E-24 T 14-10-2018 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Pfam PF00684 DnaJ central domain 151 215 1.6E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Pfam PF01556 DnaJ C terminal domain 125 341 4.7E-40 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 SUPERFAMILY SSF49493 118 264 2.75E-16 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 377 38.902 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 357 4.9E-136 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 SMART SM00271 4 61 4.1E-28 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Gene3D G3DSA:2.60.260.20 121 257 1.5E-38 T 14-10-2018 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 SUPERFAMILY SSF49493 267 352 6.02E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Gene3D G3DSA:2.10.230.10 151 215 1.5E-38 T 14-10-2018 DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 PRINTS PR00625 DnaJ domain signature 41 61 1.9E-29 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 PRINTS PR00625 DnaJ domain signature 61 80 1.9E-29 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 PRINTS PR00625 DnaJ domain signature 7 25 1.9E-29 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 PRINTS PR00625 DnaJ domain signature 25 40 1.9E-29 T 14-10-2018 IPR001623 DnaJ domain DKL56_04440 1b67b21e39aeb99a51d4d587b650a7fa 379 Gene3D G3DSA:1.10.287.110 1 114 1.2E-37 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DKL56_04985 697f7e6330644df2164c73656b3570df 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04985 697f7e6330644df2164c73656b3570df 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 5 49 2.0E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04985 697f7e6330644df2164c73656b3570df 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.158 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04985 697f7e6330644df2164c73656b3570df 49 Pfam PF00471 Ribosomal protein L33 4 49 2.0E-20 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04985 697f7e6330644df2164c73656b3570df 49 Gene3D G3DSA:2.20.28.120 1 49 6.2E-21 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04985 697f7e6330644df2164c73656b3570df 49 SUPERFAMILY SSF57829 3 49 7.94E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DKL56_07405 bf9910f76dd84ede86d8591b79e47741 134 Gene3D G3DSA:3.40.50.510 1 134 9.1E-26 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07405 bf9910f76dd84ede86d8591b79e47741 134 SUPERFAMILY SSF53062 1 123 6.41E-20 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07405 bf9910f76dd84ede86d8591b79e47741 134 Pfam PF03610 PTS system fructose IIA component 3 104 1.9E-13 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 SUPERFAMILY SSF51735 2 241 6.58E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 6.3E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 Pfam PF00106 short chain dehydrogenase 2 194 8.4E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_02545 b8aa08227c84a71fa4420cbc032aa5a4 242 Gene3D G3DSA:3.40.50.720 1 241 1.3E-48 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 Gene3D G3DSA:1.20.1260.30 1 185 1.9E-54 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 SUPERFAMILY SSF53335 8 507 1.41E-131 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 191 207 1.9E-20 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 219 233 1.9E-20 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 328 352 1.9E-20 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 292 304 1.9E-20 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 Gene3D G3DSA:3.40.50.150 189 469 2.8E-98 T 14-10-2018 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 295 301 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 Pfam PF12161 HsdM N-terminal domain 8 158 8.7E-23 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 492 1.3E-121 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 DKL56_02270 a45d61931c0d13d5cf4c6a8de3ef1323 526 Pfam PF02384 N-6 DNA Methylase 169 474 4.6E-109 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DKL56_06240 7c7de652645709641039a29003e333a1 290 SUPERFAMILY SSF118352 232 287 1.57E-17 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 290 35.425 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 Gene3D G3DSA:3.90.1280.10 234 289 9.7E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 PIRSF PIRSF005261 1 290 2.6E-68 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 SUPERFAMILY SSF64397 4 241 6.54E-67 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 Pfam PF01430 Hsp33 protein 3 279 2.4E-81 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DKL56_06240 7c7de652645709641039a29003e333a1 290 Gene3D G3DSA:3.55.30.10 2 233 1.6E-81 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 384 864 4.2E-33 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 SUPERFAMILY SSF88713 3 268 1.41E-44 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 4 262 1.9E-38 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Gene3D G3DSA:2.70.98.30 484 771 3.1E-64 T 14-10-2018 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Pfam PF09261 Alpha mannosidase middle domain 277 354 2.4E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Gene3D G3DSA:1.20.1270.50 280 378 1.4E-22 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 SMART SM00872 276 354 8.2E-6 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 SUPERFAMILY SSF74650 375 871 2.09E-55 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 SUPERFAMILY SSF88688 282 377 1.5E-7 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily DKL56_05915 a64899ef43a5a96dcec61797ea7ebf32 889 Gene3D G3DSA:3.20.110.10 1 271 7.7E-85 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 Pfam PF00664 ABC transporter transmembrane region 25 286 4.8E-16 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 SUPERFAMILY SSF90123 12 476 1.22E-37 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 SUPERFAMILY SSF52540 338 522 5.22E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 SMART SM00382 365 531 2.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 Gene3D G3DSA:1.20.1560.10 6 315 1.0E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 Pfam PF00005 ABC transporter 358 490 5.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 Gene3D G3DSA:3.40.50.300 335 527 1.0E-41 T 14-10-2018 DKL56_02780 d59995046a8ef019f59c0538fee187ba 533 ProSitePatterns PS00211 ABC transporters family signature. 463 477 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06145 793fd52d0e0bad7edf89cf774c757af4 210 SUPERFAMILY SSF52166 1 203 4.58E-79 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06145 793fd52d0e0bad7edf89cf774c757af4 210 Pfam PF00573 Ribosomal protein L4/L1 family 17 202 5.2E-69 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DKL56_06145 793fd52d0e0bad7edf89cf774c757af4 210 Gene3D G3DSA:3.40.1370.10 1 210 7.4E-79 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06145 793fd52d0e0bad7edf89cf774c757af4 210 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 205 36.501 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06145 793fd52d0e0bad7edf89cf774c757af4 210 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 2.1E-80 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 PRINTS PR00421 Thioredoxin family signature 27 36 1.4E-6 T 14-10-2018 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 PRINTS PR00421 Thioredoxin family signature 19 27 1.4E-6 T 14-10-2018 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 PRINTS PR00421 Thioredoxin family signature 66 77 1.4E-6 T 14-10-2018 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 100 1.8E-34 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 SUPERFAMILY SSF52833 2 101 1.33E-33 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 Gene3D G3DSA:3.40.30.10 1 102 1.6E-31 T 14-10-2018 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 Pfam PF00085 Thioredoxin 2 99 4.0E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 PIRSF PIRSF000077 1 102 2.9E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DKL56_01595 9fed0d0aaa798fab41967dcbb3e12bb1 103 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DKL56_05580 60fc7287b0acc215cf2b139e816bd69d 107 Pfam PF06153 Cyclic-di-AMP receptor 1 107 8.5E-36 T 14-10-2018 IPR010375 Cyclic-di-AMP receptor DKL56_05580 60fc7287b0acc215cf2b139e816bd69d 107 SUPERFAMILY SSF54913 1 104 4.45E-10 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DKL56_05580 60fc7287b0acc215cf2b139e816bd69d 107 Gene3D G3DSA:3.30.70.120 1 101 3.6E-34 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 125 243 2.4E-47 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 392 7.9E-183 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Gene3D G3DSA:3.30.300.10 5 245 3.1E-178 T 14-10-2018 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 395 57.669 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 9.5E-42 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Gene3D G3DSA:3.30.300.10 102 387 3.1E-178 T 14-10-2018 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 SUPERFAMILY SSF55973 3 110 1.88E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 1.5E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 PIRSF PIRSF000497 1 396 2.7E-176 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 Gene3D G3DSA:3.30.300.10 11 282 3.1E-178 T 14-10-2018 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 SUPERFAMILY SSF55973 245 394 1.06E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_05370 0da7f0993c7a65f4176cce4d1aa03443 399 SUPERFAMILY SSF55973 120 244 5.1E-51 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 248 436 2.7E-55 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 SUPERFAMILY SSF48013 5 130 6.41E-27 T 14-10-2018 IPR035926 NusB-like superfamily DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 Pfam PF01029 NusB family 5 129 2.4E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 SUPERFAMILY SSF53335 140 437 2.84E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 Gene3D G3DSA:3.40.50.150 145 437 7.1E-76 T 14-10-2018 DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 373 389 5.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 421 438 5.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 226 240 5.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 255 265 5.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 323 335 5.0E-27 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 Gene3D G3DSA:1.10.940.10 2 144 6.9E-28 T 14-10-2018 IPR035926 NusB-like superfamily DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 439 8.5E-103 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DKL56_04760 559199cc1bbceaa9172496d620a83cf5 440 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 322 333 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 DKL56_06360 5714c09a254c6132859be2331700aea4 150 Pfam PF04397 LytTr DNA-binding domain 55 148 2.7E-15 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_06360 5714c09a254c6132859be2331700aea4 150 SMART SM00850 53 149 2.6E-19 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_06360 5714c09a254c6132859be2331700aea4 150 Gene3D G3DSA:2.40.50.1020 41 142 1.1E-7 T 14-10-2018 DKL56_01930 1b96ccc2fb06a88ca6efdc83651bb802 261 Pfam PF03609 PTS system sorbose-specific iic component 3 233 8.0E-67 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_00690 75eb8222139d76d5967fc774b47279cf 345 Pfam PF17312 Bacteriocin helveticin-J 33 328 4.6E-75 T 14-10-2018 IPR035280 Bacteriocin helveticin-J GO:0042742 DKL56_00690 75eb8222139d76d5967fc774b47279cf 345 ProDom PD133452 BACTERIOCIN J HELVETICIN ANTIBIOTIC ANTIMICROBIAL 37 342 3.0E-31 T 14-10-2018 IPR035280 Bacteriocin helveticin-J GO:0042742 DKL56_07690 694251e32a50c60c0a55c4896451a6ff 431 PIRSF PIRSF021438 3 392 4.4E-138 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes DKL56_07690 694251e32a50c60c0a55c4896451a6ff 431 PIRSF PIRSF021438 394 426 200.0 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes DKL56_07690 694251e32a50c60c0a55c4896451a6ff 431 Pfam PF04914 DltD protein 43 390 2.4E-124 T 14-10-2018 IPR006998 DltD DKL56_07690 694251e32a50c60c0a55c4896451a6ff 431 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 11 389 2.5E-139 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes DKL56_00715 f48020ea7a21e2fbeb83db3569505219 271 Gene3D G3DSA:3.40.50.1820 3 270 1.2E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00715 f48020ea7a21e2fbeb83db3569505219 271 Pfam PF07859 alpha/beta hydrolase fold 81 159 8.8E-7 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DKL56_00715 f48020ea7a21e2fbeb83db3569505219 271 Pfam PF00326 Prolyl oligopeptidase family 184 241 1.1E-5 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DKL56_00715 f48020ea7a21e2fbeb83db3569505219 271 SUPERFAMILY SSF53474 30 240 1.99E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_01140 da37364f080a1e3558df462c716499c2 431 SUPERFAMILY SSF56281 9 430 7.72E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_01140 da37364f080a1e3558df462c716499c2 431 Pfam PF12706 Beta-lactamase superfamily domain 85 222 3.5E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_01140 da37364f080a1e3558df462c716499c2 431 SMART SM00849 19 216 1.2E-5 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_01140 da37364f080a1e3558df462c716499c2 431 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 379 411 1.4E-7 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DKL56_01140 da37364f080a1e3558df462c716499c2 431 Gene3D G3DSA:3.60.15.10 7 423 2.0E-129 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_01140 da37364f080a1e3558df462c716499c2 431 Gene3D G3DSA:3.40.50.10710 226 383 2.0E-129 T 14-10-2018 DKL56_07770 cdad23ca38fdae0e79590459f7d30855 216 Pfam PF01712 Deoxynucleoside kinase 5 209 6.3E-65 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain DKL56_07770 cdad23ca38fdae0e79590459f7d30855 216 Gene3D G3DSA:3.40.50.300 2 212 1.1E-51 T 14-10-2018 DKL56_07770 cdad23ca38fdae0e79590459f7d30855 216 SUPERFAMILY SSF52540 4 209 5.65E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07770 cdad23ca38fdae0e79590459f7d30855 216 PIRSF PIRSF000705 2 214 1.4E-54 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DKL56_01870 54275ca3b1a115cb9643307f3c3b751b 218 Pfam PF00881 Nitroreductase family 11 191 6.9E-22 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DKL56_01870 54275ca3b1a115cb9643307f3c3b751b 218 Gene3D G3DSA:3.40.109.10 1 218 6.8E-35 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_01870 54275ca3b1a115cb9643307f3c3b751b 218 SUPERFAMILY SSF55469 1 215 3.14E-29 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_07420 632aa24a37a26c1b2baaee831ae4dfdc 164 SUPERFAMILY SSF52728 1 154 5.75E-43 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_07420 632aa24a37a26c1b2baaee831ae4dfdc 164 Gene3D G3DSA:3.40.35.10 1 162 4.0E-45 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_07420 632aa24a37a26c1b2baaee831ae4dfdc 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 6.2E-43 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 Gene3D G3DSA:3.40.50.720 1 143 1.3E-52 T 14-10-2018 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 144 304 1.1E-27 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 SUPERFAMILY SSF56327 142 305 8.36E-45 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 4 141 3.3E-43 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 171 177 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 5.1E-33 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PRINTS PR00086 L-lactate dehydrogenase signature 169 182 5.1E-33 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PRINTS PR00086 L-lactate dehydrogenase signature 4 28 5.1E-33 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PRINTS PR00086 L-lactate dehydrogenase signature 115 135 5.1E-33 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PRINTS PR00086 L-lactate dehydrogenase signature 139 157 5.1E-33 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 SUPERFAMILY SSF51735 3 143 3.3E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 7 300 2.4E-102 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 2 307 39.703 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 Gene3D G3DSA:3.90.110.10 144 309 6.6E-46 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_04245 d07881e89ec212b9a64510c82adcc8a2 309 PIRSF PIRSF000102 1 308 6.7E-94 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 PIRSF PIRSF005700 1 447 3.1E-177 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 Pfam PF03051 Peptidase C1-like family 4 443 1.3E-203 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 SUPERFAMILY SSF54001 1 445 9.83E-131 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 64 75 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 362 372 - T 14-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 DKL56_05740 f9c8885c83c9d645083da6e631e6fc6d 448 Gene3D G3DSA:3.90.70.10 53 446 2.8E-170 T 14-10-2018 DKL56_06620 02f954473614c3990735127fd576962d 255 Gene3D G3DSA:3.20.20.140 1 253 1.7E-88 T 14-10-2018 DKL56_06620 02f954473614c3990735127fd576962d 255 SUPERFAMILY SSF51556 3 254 1.71E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_06620 02f954473614c3990735127fd576962d 255 PIRSF PIRSF005902 1 255 6.3E-77 T 14-10-2018 IPR001130 TatD family GO:0016788 DKL56_06620 02f954473614c3990735127fd576962d 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DKL56_06620 02f954473614c3990735127fd576962d 255 Pfam PF01026 TatD related DNase 4 252 2.7E-73 T 14-10-2018 IPR001130 TatD family GO:0016788 DKL56_06620 02f954473614c3990735127fd576962d 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 253 6.4E-77 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DKL56_06255 57617c9e287c23bd7dde150e3048c3c0 122 SMART SM00316 5 73 1.0E-9 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_06255 57617c9e287c23bd7dde150e3048c3c0 122 Pfam PF00575 S1 RNA binding domain 3 62 1.6E-8 T 14-10-2018 IPR003029 S1 domain GO:0003676 DKL56_06255 57617c9e287c23bd7dde150e3048c3c0 122 Gene3D G3DSA:2.40.50.140 2 80 1.3E-15 T 14-10-2018 DKL56_06255 57617c9e287c23bd7dde150e3048c3c0 122 SUPERFAMILY SSF50249 2 74 2.16E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 SMART SM00079 38 260 1.5E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 SUPERFAMILY SSF53850 1 260 9.82E-61 T 14-10-2018 DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 260 1.3E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 Gene3D G3DSA:3.40.190.10 39 258 5.5E-67 T 14-10-2018 DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 Gene3D G3DSA:3.40.190.10 126 223 5.5E-67 T 14-10-2018 DKL56_05105 a002689c96b04e546bc40655d5b07a33 272 SMART SM00062 38 261 1.6E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 PIRSF PIRSF003095 1 440 1.0E-125 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Hamap MF_00303 Trigger factor [tig]. 1 426 21.641 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Gene3D G3DSA:1.10.3120.10 117 424 3.5E-87 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 420 3.4E-41 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 SUPERFAMILY SSF102735 1 128 1.57E-34 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Gene3D G3DSA:3.30.70.1050 1 116 4.2E-27 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 TIGRFAM TIGR00115 tig: trigger factor 13 417 6.9E-132 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 SUPERFAMILY SSF109998 249 434 1.28E-38 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Gene3D G3DSA:3.10.50.40 151 247 3.5E-87 T 14-10-2018 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 8.3E-39 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 SUPERFAMILY SSF54534 89 242 1.45E-37 T 14-10-2018 DKL56_03585 74f8d0d003c418478d7ac59f0b17c541 440 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 157 235 4.4E-16 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DKL56_00475 0343fe2554612e695a1451d0e8f5e0c5 273 Gene3D G3DSA:3.10.450.660 49 262 2.2E-36 T 14-10-2018 DKL56_00475 0343fe2554612e695a1451d0e8f5e0c5 273 Pfam PF09648 YycH protein 38 258 2.2E-52 T 14-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 DKL56_00475 0343fe2554612e695a1451d0e8f5e0c5 273 Gene3D G3DSA:3.30.310.160 72 186 2.2E-36 T 14-10-2018 DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 Gene3D G3DSA:3.40.630.30 1 115 4.2E-14 T 14-10-2018 DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 SUPERFAMILY SSF55729 159 281 8.64E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 Pfam PF00583 Acetyltransferase (GNAT) family 33 107 6.1E-6 T 14-10-2018 IPR000182 GNAT domain DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 Pfam PF00583 Acetyltransferase (GNAT) family 193 273 2.2E-11 T 14-10-2018 IPR000182 GNAT domain DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 Gene3D G3DSA:3.40.630.30 156 286 5.2E-20 T 14-10-2018 DKL56_04790 b6100fee7c98e43bcf1f41c3386157ed 287 SUPERFAMILY SSF55729 43 107 1.44E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 Pfam PF01380 SIS domain 22 118 1.3E-6 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 Gene3D G3DSA:3.40.50.12570 189 283 4.1E-58 T 14-10-2018 DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 SUPERFAMILY SSF53697 11 325 1.11E-49 T 14-10-2018 DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 Gene3D G3DSA:1.10.10.2240 153 305 4.1E-58 T 14-10-2018 DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 PIRSF PIRSF009290 1 325 1.9E-77 T 14-10-2018 IPR024713 Fructosamine deglycase FrlB DKL56_01490 9fb372a75b61116827dfe3e5db644c4d 325 Gene3D G3DSA:3.40.50.10490 4 149 8.7E-25 T 14-10-2018 DKL56_06980 794eb615c61e687e25f264251ce43281 340 Gene3D G3DSA:3.20.20.140 2 340 5.8E-95 T 14-10-2018 DKL56_06980 794eb615c61e687e25f264251ce43281 340 Pfam PF00962 Adenosine/AMP deaminase 13 327 8.0E-64 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 DKL56_06980 794eb615c61e687e25f264251ce43281 340 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 275 281 - T 14-10-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 DKL56_06980 794eb615c61e687e25f264251ce43281 340 Hamap MF_01962 Adenine deaminase. 9 320 63.934 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DKL56_06980 794eb615c61e687e25f264251ce43281 340 SUPERFAMILY SSF51556 8 336 4.09E-77 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_06980 794eb615c61e687e25f264251ce43281 340 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 13 331 2.7E-105 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 ProSitePatterns PS60002 Phosphoketolase signature 1. 142 148 - T 14-10-2018 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site GO:0005975|GO:0016832 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Gene3D G3DSA:3.40.50.970 395 615 7.2E-82 T 14-10-2018 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 SUPERFAMILY SSF52518 4 376 2.3E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 SUPERFAMILY SSF52518 385 602 1.99E-35 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Pfam PF09363 XFP C-terminal domain 596 796 3.0E-76 T 14-10-2018 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal GO:0005975|GO:0016832 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Gene3D G3DSA:3.40.50.920 616 800 6.3E-66 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 409 583 3.9E-70 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Pfam PF09364 XFP N-terminal domain 7 393 1.3E-169 T 14-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 Gene3D G3DSA:3.40.50.970 3 394 4.9E-150 T 14-10-2018 DKL56_02020 9e3ad8e8fb9f894afbbad12e49f17a07 800 PIRSF PIRSF017245 1 798 0.0 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 112 18.36 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 Gene3D G3DSA:3.30.230.10 1 116 1.6E-31 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 8 100 6.0E-36 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 SUPERFAMILY SSF54211 1 111 3.29E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 Pfam PF00825 Ribonuclease P 1 106 3.6E-30 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DKL56_07840 9380df16b4d2b2cb53dff427dc53bc5d 122 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 105 9.1E-23 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 254 2.3E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 Gene3D G3DSA:3.30.1240.10 82 210 2.2E-75 T 14-10-2018 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 281 7.3E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 281 4.5E-57 T 14-10-2018 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 Gene3D G3DSA:3.40.50.1000 3 278 2.2E-75 T 14-10-2018 IPR023214 HAD superfamily DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 ProSitePatterns PS01229 Hypothetical cof family signature 2. 235 257 - T 14-10-2018 DKL56_02795 d3b9e81d2c3fde50f65d65dc40c00df4 291 SUPERFAMILY SSF56784 2 285 3.23E-64 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 159 1.1E-46 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 Gene3D G3DSA:1.20.5.320 426 461 6.1E-19 T 14-10-2018 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 SUPERFAMILY SSF51735 3 169 1.69E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 SMART SM01350 176 458 2.1E-145 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 Gene3D G3DSA:1.10.1040.10 178 424 2.0E-82 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PIRSF PIRSF000109 1 461 2.1E-176 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 Gene3D G3DSA:3.40.50.720 1 177 1.2E-51 T 14-10-2018 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 176 457 1.1E-105 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 3 458 2.4E-171 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 SUPERFAMILY SSF48179 174 460 8.5E-103 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 347 369 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 116 141 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 63 92 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 247 274 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 2 25 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_07815 6f8755c876f444d21bff9a0282bdb7e0 461 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 165 193 4.4E-72 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DKL56_00085 8200906d813ceca86ed656e0eb2fcb1e 233 PRINTS PR01837 MgtC/SapB protein signature 20 39 4.2E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DKL56_00085 8200906d813ceca86ed656e0eb2fcb1e 233 PRINTS PR01837 MgtC/SapB protein signature 39 57 4.2E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DKL56_00085 8200906d813ceca86ed656e0eb2fcb1e 233 PRINTS PR01837 MgtC/SapB protein signature 73 95 4.2E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DKL56_00085 8200906d813ceca86ed656e0eb2fcb1e 233 PRINTS PR01837 MgtC/SapB protein signature 100 124 4.2E-42 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DKL56_00085 8200906d813ceca86ed656e0eb2fcb1e 233 Pfam PF02308 MgtC family 17 141 8.9E-36 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DKL56_02035 834093ef7ca1149fb8cd1909a255278d 390 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 188 387 9.0E-37 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DKL56_02035 834093ef7ca1149fb8cd1909a255278d 390 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 4 77 1.7E-13 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Gene3D G3DSA:3.40.1360.10 239 363 8.2E-36 T 14-10-2018 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 PIRSF PIRSF002811 2 601 1.5E-166 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Pfam PF10410 DnaB-helicase binding domain of primase 366 420 1.3E-14 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Gene3D G3DSA:1.10.860.10 469 601 1.4E-16 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 SUPERFAMILY SSF57783 4 99 8.33E-35 T 14-10-2018 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Gene3D G3DSA:3.90.980.10 103 238 3.2E-38 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Hamap MF_00974 DNA primase [dnaG]. 4 592 26.642 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Pfam PF01807 CHC2 zinc finger 6 97 9.0E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Gene3D G3DSA:3.90.580.10 1 102 2.8E-39 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 SUPERFAMILY SSF56731 111 420 3.01E-95 T 14-10-2018 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 SMART SM00493 257 328 3.2E-9 T 14-10-2018 IPR006171 TOPRIM domain DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 SMART SM00400 36 90 9.5E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Pfam PF13155 Toprim-like 260 345 2.6E-14 T 14-10-2018 DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 250 1.0E-36 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DKL56_04120 e8109f60fbf341856d1608b0e81f8c3f 607 TIGRFAM TIGR01391 dnaG: DNA primase 5 414 8.2E-136 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DKL56_04315 65eaf33e94e60f748aad1183b1b6152b 284 Gene3D G3DSA:3.40.190.10 43 267 7.7E-82 T 14-10-2018 DKL56_04315 65eaf33e94e60f748aad1183b1b6152b 284 PIRSF PIRSF002854 3 280 4.9E-89 T 14-10-2018 IPR004872 Lipoprotein NlpA family DKL56_04315 65eaf33e94e60f748aad1183b1b6152b 284 SUPERFAMILY SSF53850 41 283 3.87E-70 T 14-10-2018 DKL56_04315 65eaf33e94e60f748aad1183b1b6152b 284 Pfam PF03180 NLPA lipoprotein 41 280 5.4E-84 T 14-10-2018 IPR004872 Lipoprotein NlpA family DKL56_04315 65eaf33e94e60f748aad1183b1b6152b 284 Gene3D G3DSA:3.40.190.10 122 230 7.7E-82 T 14-10-2018 DKL56_01400 3770e8799f14f612f7927629b5047b3b 304 ProSitePatterns PS00018 EF-hand calcium-binding domain. 292 304 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site DKL56_01400 3770e8799f14f612f7927629b5047b3b 304 Pfam PF03609 PTS system sorbose-specific iic component 3 266 2.9E-56 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 12 309 3.5E-84 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 140 157 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 266 271 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 222 231 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 290 304 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 80 89 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00101 Aspartate carbamoyltransferase signature 42 64 8.8E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 160 307 6.1E-22 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 SUPERFAMILY SSF53671 9 311 1.96E-85 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 297 1.0E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 262 271 1.0E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.0E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 141 152 1.0E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 Gene3D G3DSA:3.40.50.1370 14 304 6.2E-91 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 Gene3D G3DSA:3.40.50.1370 141 288 6.2E-91 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 154 6.7E-35 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DKL56_04920 de6230411cd46e8218fbdd05f9ed0434 318 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 9 311 36.889 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 Gene3D G3DSA:1.20.1720.10 20 208 8.1E-46 T 14-10-2018 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 429 5.1E-73 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 Gene3D G3DSA:1.20.1250.20 261 480 2.5E-31 T 14-10-2018 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 Pfam PF07690 Major Facilitator Superfamily 26 197 2.0E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 Pfam PF07690 Major Facilitator Superfamily 211 415 1.6E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 SUPERFAMILY SSF103473 11 472 2.35E-74 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 4.5E-11 T 14-10-2018 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 4.5E-11 T 14-10-2018 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 169 193 4.5E-11 T 14-10-2018 DKL56_06770 5b89bcbbddaceee1016bdb1d2af3aae0 481 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 4.5E-11 T 14-10-2018 DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 103 5.7E-30 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 123 178 1.7E-27 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 2 182 24.573 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 Gene3D G3DSA:3.30.505.50 136 182 4.1E-26 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 Gene3D G3DSA:3.30.160.100 3 100 1.7E-30 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 SUPERFAMILY SSF69754 3 112 4.05E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DKL56_02610 1648cdb80865c43024aff5ab94a86b7e 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 96 3.1E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DKL56_06660 26755a7933e42829c179b99e766f2cc6 220 Pfam PF02517 CAAX protease self-immunity 123 212 1.6E-7 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DKL56_06040 8c8520954a709482b47cae272093e549 73 SMART SM00316 4 72 5.9E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_06040 8c8520954a709482b47cae272093e549 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.4E-39 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DKL56_06040 8c8520954a709482b47cae272093e549 73 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-28 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DKL56_06040 8c8520954a709482b47cae272093e549 73 SUPERFAMILY SSF50249 1 71 3.62E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06040 8c8520954a709482b47cae272093e549 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 73 27.676 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DKL56_06040 8c8520954a709482b47cae272093e549 73 Gene3D G3DSA:2.40.50.140 1 71 6.2E-37 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 741 2.0E-253 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SUPERFAMILY SSF109604 8 196 3.77E-75 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Pfam PF13328 HD domain 31 180 4.5E-49 T 14-10-2018 IPR003607 HD/PDEase domain DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SMART SM00471 46 158 7.2E-7 T 14-10-2018 IPR003607 HD/PDEase domain DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SUPERFAMILY SSF81301 185 399 3.76E-67 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Pfam PF02824 TGS domain 395 454 7.3E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SUPERFAMILY SSF81271 382 454 5.45E-22 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Gene3D G3DSA:3.30.70.260 666 745 5.8E-14 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Gene3D G3DSA:3.10.20.30 388 463 5.6E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SUPERFAMILY SSF55021 671 741 8.7E-8 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Gene3D G3DSA:3.30.460.10 197 330 2.9E-54 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Pfam PF04607 Region found in RelA / SpoT proteins 240 349 2.2E-39 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 SMART SM00954 240 350 5.6E-69 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Gene3D G3DSA:1.10.3210.10 1 196 5.7E-87 T 14-10-2018 DKL56_04220 e688c80d52e22a80790f3c2558931bb6 745 Pfam PF13291 ACT domain 665 742 6.5E-17 T 14-10-2018 IPR002912 ACT domain DKL56_04095 e6b656c279695d6d7aa1882d84cfedcb 228 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 18 223 5.7E-61 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DKL56_04095 e6b656c279695d6d7aa1882d84cfedcb 228 PIRSF PIRSF018637 1 227 1.1E-64 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DKL56_04095 e6b656c279695d6d7aa1882d84cfedcb 228 SUPERFAMILY SSF53335 13 100 2.21E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_04095 e6b656c279695d6d7aa1882d84cfedcb 228 Gene3D G3DSA:3.40.50.150 1 161 3.7E-54 T 14-10-2018 DKL56_04510 0d0f19058a62333df26af160dccf73a7 418 Pfam PF02163 Peptidase family M50 7 403 1.2E-76 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DKL56_04510 0d0f19058a62333df26af160dccf73a7 418 Gene3D G3DSA:2.30.42.10 198 285 3.1E-17 T 14-10-2018 DKL56_04510 0d0f19058a62333df26af160dccf73a7 418 Pfam PF13180 PDZ domain 201 265 1.5E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DKL56_04510 0d0f19058a62333df26af160dccf73a7 418 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 5 415 9.0E-78 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DKL56_04510 0d0f19058a62333df26af160dccf73a7 418 SUPERFAMILY SSF50156 160 266 1.45E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DKL56_06415 fb780d63e3a12eb00be900fb39c7bdf5 198 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.103 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DKL56_06415 fb780d63e3a12eb00be900fb39c7bdf5 198 Gene3D G3DSA:3.40.50.2020 3 188 4.1E-51 T 14-10-2018 DKL56_06415 fb780d63e3a12eb00be900fb39c7bdf5 198 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 3.7E-78 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DKL56_06415 fb780d63e3a12eb00be900fb39c7bdf5 198 Pfam PF00156 Phosphoribosyl transferase domain 32 156 1.5E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_06415 fb780d63e3a12eb00be900fb39c7bdf5 198 SUPERFAMILY SSF53271 2 186 4.82E-41 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_03905 83da8455db2b694396a804a586b5d264 562 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 436 3.2E-131 T 14-10-2018 DKL56_03905 83da8455db2b694396a804a586b5d264 562 Pfam PF05670 Domain of unknown function (DUF814) 448 530 3.7E-25 T 14-10-2018 IPR008532 Domain of unknown function DUF814 DKL56_03905 83da8455db2b694396a804a586b5d264 562 Gene3D G3DSA:2.30.310.10 1 166 5.8E-60 T 14-10-2018 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 492 264.67 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 PIRSF PIRSF006005 1 492 9.0E-231 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 242 436 3.5E-33 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 19 225 6.9E-34 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 7 488 1.8E-227 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_05745 d5d5bec486c72d8a6e483267d537f12e 492 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 255 272 - T 14-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 243 328 1.1E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 SUPERFAMILY SSF52540 5 264 2.17E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 Gene3D G3DSA:3.40.50.300 3 340 1.1E-89 T 14-10-2018 DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 SMART SM00382 34 243 4.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 245 306 3.1E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 Pfam PF00005 ABC transporter 26 193 2.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02100 520ff1e201596d523dc63558b814e2e3 359 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04970 9b04c82cc96f43a2daafeba793cb3397 72 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 1.3E-28 T 14-10-2018 IPR009256 Protein of unknown function DUF910 DKL56_04970 9b04c82cc96f43a2daafeba793cb3397 72 Gene3D G3DSA:1.10.287.760 1 70 1.9E-24 T 14-10-2018 IPR023164 YqgQ-like superfamily DKL56_04970 9b04c82cc96f43a2daafeba793cb3397 72 SUPERFAMILY SSF158379 1 62 1.06E-23 T 14-10-2018 IPR023164 YqgQ-like superfamily DKL56_05185 65f4a223a40bb44c7e51522a01cc746a 246 Gene3D G3DSA:3.40.50.300 1 243 2.5E-57 T 14-10-2018 DKL56_05185 65f4a223a40bb44c7e51522a01cc746a 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05185 65f4a223a40bb44c7e51522a01cc746a 246 Pfam PF00005 ABC transporter 19 161 2.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05185 65f4a223a40bb44c7e51522a01cc746a 246 SMART SM00382 27 212 1.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05185 65f4a223a40bb44c7e51522a01cc746a 246 SUPERFAMILY SSF52540 2 225 2.61E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Pfam PF13522 Glutamine amidotransferase domain 58 192 1.7E-20 T 14-10-2018 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Pfam PF01380 SIS domain 460 582 3.1E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Pfam PF01380 SIS domain 288 409 2.0E-27 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Gene3D G3DSA:3.40.50.10490 249 602 7.7E-117 T 14-10-2018 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Gene3D G3DSA:3.60.20.10 2 240 3.5E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 SUPERFAMILY SSF56235 2 234 1.03E-56 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Gene3D G3DSA:3.40.50.10490 444 588 7.7E-117 T 14-10-2018 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 603 5.6E-207 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 SUPERFAMILY SSF53697 246 603 5.07E-92 T 14-10-2018 DKL56_02840 3a16fb32d6495a5816d82ead6880c50c 603 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 603 36.313 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Pfam PF02142 MGS-like domain 950 1037 1.0E-20 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 4.0E-41 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.7E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SMART SM01096 420 540 1.8E-65 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF52335 929 1051 7.46E-32 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 5.5E-32 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.2E-74 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SMART SM00851 949 1037 2.1E-28 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:3.40.50.20 547 655 1.9E-46 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF52440 1 127 8.49E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1058 12.901 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF52440 549 668 9.78E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF56059 666 926 2.3E-96 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:1.10.1030.10 402 546 7.9E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:3.30.470.20 659 929 2.2E-101 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:3.40.50.20 1 116 1.1E-45 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1057 13.244 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF48108 394 547 8.37E-49 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 SUPERFAMILY SSF56059 128 399 3.54E-106 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:3.40.50.1380 930 1059 1.8E-38 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 Gene3D G3DSA:3.30.470.20 120 401 1.6E-122 T 14-10-2018 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_04905 b999b4d1d166e1d5f697b04a647da08d 1060 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1048 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_02510 c27f009243b14726cb2f98ee28d78aa9 344 SUPERFAMILY SSF51004 48 342 6.8E-39 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DKL56_02510 c27f009243b14726cb2f98ee28d78aa9 344 Gene3D G3DSA:2.130.10.10 1 344 3.5E-97 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DKL56_02510 c27f009243b14726cb2f98ee28d78aa9 344 Pfam PF10282 Lactonase, 7-bladed beta-propeller 3 342 2.4E-104 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller DKL56_01955 89eaa879f491d120af3335af32dd5100 119 SUPERFAMILY SSF46973 14 110 4.05E-35 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DKL56_01955 89eaa879f491d120af3335af32dd5100 119 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 17 109 1.3E-35 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DKL56_01955 89eaa879f491d120af3335af32dd5100 119 Gene3D G3DSA:1.20.58.280 8 115 1.1E-37 T 14-10-2018 DKL56_01955 89eaa879f491d120af3335af32dd5100 119 PIRSF PIRSF000699 7 115 9.7E-36 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DKL56_04565 b6c09aa48007aa615be24e0ec9b5d2c6 204 SMART SM00563 34 144 8.7E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DKL56_04565 b6c09aa48007aa615be24e0ec9b5d2c6 204 SUPERFAMILY SSF69593 12 195 2.22E-39 T 14-10-2018 DKL56_04565 b6c09aa48007aa615be24e0ec9b5d2c6 204 Pfam PF01553 Acyltransferase 21 141 2.1E-17 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 Gene3D G3DSA:3.20.20.80 33 360 5.9E-98 T 14-10-2018 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 PRINTS PR00741 Glycosyl hydrolase family 29 signature 112 128 2.6E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 PRINTS PR00741 Glycosyl hydrolase family 29 signature 343 365 2.6E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 PRINTS PR00741 Glycosyl hydrolase family 29 signature 310 331 2.6E-14 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 SUPERFAMILY SSF51445 31 360 1.22E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 Pfam PF01120 Alpha-L-fucosidase 14 357 3.7E-84 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 SMART SM00812 22 400 1.2E-79 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 Gene3D G3DSA:2.60.40.1180 361 426 5.9E-98 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_06570 cd25d2207357fc5409a6b67d1d757bfc 441 PIRSF PIRSF001092 3 430 2.0E-113 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Gene3D G3DSA:3.30.479.20 155 272 2.3E-38 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 SUPERFAMILY SSF54713 151 290 1.57E-47 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Pfam PF00889 Elongation factor TS 71 273 4.8E-69 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 291 1.6E-98 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Gene3D G3DSA:1.10.286.20 192 238 2.3E-38 T 14-10-2018 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Gene3D G3DSA:3.30.479.20 57 147 4.9E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 73.331 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 SUPERFAMILY SSF46934 3 56 3.83E-18 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 SUPERFAMILY SSF54713 56 142 1.24E-19 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DKL56_04550 56331490a38c0042693912fe0d6ff5be 291 Gene3D G3DSA:1.10.8.10 1 56 2.4E-26 T 14-10-2018 DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 SMART SM00967 31 104 7.6E-5 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 Pfam PF00588 SpoU rRNA Methylase family 114 252 1.9E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 SUPERFAMILY SSF55315 3 101 6.36E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 Gene3D G3DSA:3.30.1330.30 2 102 1.7E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 SUPERFAMILY SSF75217 109 254 2.55E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 Gene3D G3DSA:3.40.1280.10 104 255 7.6E-46 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKL56_05020 e035612acbf112e7f5b24ac1d7c90e7f 255 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 32 103 1.3E-5 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 Gene3D G3DSA:3.40.50.12570 190 283 7.0E-54 T 14-10-2018 DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 Pfam PF01380 SIS domain 23 122 2.4E-11 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 SUPERFAMILY SSF53697 11 324 4.56E-50 T 14-10-2018 DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 PIRSF PIRSF009290 2 325 1.3E-75 T 14-10-2018 IPR024713 Fructosamine deglycase FrlB DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 Gene3D G3DSA:3.40.50.10490 2 149 3.4E-33 T 14-10-2018 DKL56_02070 dae276ba42700fe03e57b490f1a51ed1 325 Gene3D G3DSA:1.10.10.2240 156 304 7.0E-54 T 14-10-2018 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 SUPERFAMILY SSF52540 4 210 7.22E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 SMART SM00838 410 495 0.0023 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 2.2E-289 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Gene3D G3DSA:2.40.30.10 195 294 4.0E-34 T 14-10-2018 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 SUPERFAMILY SSF54980 301 379 4.32E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 4.5E-43 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 184 1.2E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 SUPERFAMILY SSF54980 408 503 1.73E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Pfam PF00679 Elongation factor G C-terminus 408 494 7.9E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Gene3D G3DSA:3.30.70.3380 377 487 3.3E-40 T 14-10-2018 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Gene3D G3DSA:3.30.70.870 295 376 6.3E-36 T 14-10-2018 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 SUPERFAMILY SSF50447 174 297 1.61E-29 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Gene3D G3DSA:3.30.70.2570 489 563 1.4E-29 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Pfam PF03144 Elongation factor Tu domain 2 214 284 4.8E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 279.802 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 8.4E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_04435 6dd8fdb34d41822dead5f582359c2f18 612 Gene3D G3DSA:3.40.50.300 10 194 1.7E-71 T 14-10-2018 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 SUPERFAMILY SSF46894 129 229 1.47E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 228 5.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 SMART SM00448 2 112 2.5E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 SMART SM00862 154 229 3.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 Gene3D G3DSA:1.10.10.10 126 237 2.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 SUPERFAMILY SSF52172 1 123 3.56E-38 T 14-10-2018 IPR011006 CheY-like superfamily DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 Pfam PF00072 Response regulator receiver domain 4 112 2.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DKL56_05040 fb0e9b63820496b9c52f4989eb8cd20b 237 Gene3D G3DSA:3.40.50.2300 1 121 1.1E-35 T 14-10-2018 DKL56_01635 ffd691557481b332053b0adaff876b63 368 Gene3D G3DSA:3.90.230.10 136 365 2.3E-74 T 14-10-2018 DKL56_01635 ffd691557481b332053b0adaff876b63 368 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 136 8.1E-24 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DKL56_01635 ffd691557481b332053b0adaff876b63 368 SUPERFAMILY SSF55920 137 364 5.36E-76 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DKL56_01635 ffd691557481b332053b0adaff876b63 368 SUPERFAMILY SSF53092 3 136 4.36E-31 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DKL56_01635 ffd691557481b332053b0adaff876b63 368 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DKL56_01635 ffd691557481b332053b0adaff876b63 368 Pfam PF00557 Metallopeptidase family M24 146 348 7.2E-58 T 14-10-2018 IPR000994 Peptidase M24 DKL56_01635 ffd691557481b332053b0adaff876b63 368 Gene3D G3DSA:3.40.350.10 2 135 6.9E-37 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Pfam PF02811 PHP domain 10 118 1.5E-14 T 14-10-2018 IPR004013 PHP domain GO:0003824 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 SMART SM00481 4 71 2.5E-5 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 SUPERFAMILY SSF89550 20 89 2.75E-5 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Pfam PF14579 Helix-hairpin-helix motif 789 877 1.7E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 291 716 3.2E-160 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Gene3D G3DSA:1.10.150.870 765 859 2.7E-5 T 14-10-2018 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Gene3D G3DSA:3.20.20.140 1 269 3.5E-45 T 14-10-2018 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 Gene3D G3DSA:1.10.10.1600 426 503 4.2E-14 T 14-10-2018 DKL56_03645 09d6709bd85f5c2dfdfa1169febf11ae 1042 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 995 3.4E-282 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_06275 d0074bea59c585483d9c133574405cca 188 Pfam PF01195 Peptidyl-tRNA hydrolase 3 188 1.1E-56 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DKL56_06275 d0074bea59c585483d9c133574405cca 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 188 2.3E-59 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DKL56_06275 d0074bea59c585483d9c133574405cca 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 180 34.041 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DKL56_06275 d0074bea59c585483d9c133574405cca 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DKL56_06275 d0074bea59c585483d9c133574405cca 188 SUPERFAMILY SSF53178 1 188 3.66E-61 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DKL56_06275 d0074bea59c585483d9c133574405cca 188 Gene3D G3DSA:3.40.50.1470 1 188 9.1E-68 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 Gene3D G3DSA:3.40.50.10750 143 296 3.2E-124 T 14-10-2018 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 20 320 2.2E-114 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 SUPERFAMILY SSF53659 1 323 1.36E-87 T 14-10-2018 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 320 5.0E-116 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 Gene3D G3DSA:3.40.50.10950 19 320 3.2E-124 T 14-10-2018 DKL56_02805 64f9fed4440f74b7d1f2f27ed58f63f3 329 PIRSF PIRSF000428 1 327 4.7E-105 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DKL56_01310 61d69718127e555226808dc4b03305be 290 Gene3D G3DSA:3.40.570.10 43 262 4.8E-68 T 14-10-2018 DKL56_01310 61d69718127e555226808dc4b03305be 290 Pfam PF13930 DNA/RNA non-specific endonuclease 72 208 2.0E-19 T 14-10-2018 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 Pfam PF03830 PTS system sorbose subfamily IIB component 169 314 1.4E-47 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 Pfam PF03610 PTS system fructose IIA component 3 106 2.8E-32 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 SUPERFAMILY SSF52728 167 325 2.22E-50 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 106 2.6E-30 T 14-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 SUPERFAMILY SSF53062 1 129 3.01E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 Gene3D G3DSA:3.40.50.510 1 132 3.1E-40 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01265 42292f6dff62dd6c0fb461e99083c9bf 334 Gene3D G3DSA:3.40.35.10 164 327 2.0E-48 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 137 206 3.8E-21 T 14-10-2018 IPR006343 DnaD domain DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 Pfam PF07261 Replication initiation and membrane attachment 137 208 5.9E-23 T 14-10-2018 IPR006343 DnaD domain DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 Pfam PF13730 Helix-turn-helix domain 27 75 7.5E-6 T 14-10-2018 DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 Gene3D G3DSA:1.10.10.10 2 112 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 Gene3D G3DSA:1.10.10.630 131 207 1.8E-28 T 14-10-2018 IPR034829 DnaD-like domain superfamily DKL56_03980 40cbe22d5c8a40e60538d6f915e9f6d8 213 SUPERFAMILY SSF158499 136 201 8.11E-19 T 14-10-2018 IPR034829 DnaD-like domain superfamily DKL56_01010 08f2031d7c50027d1b8a54ec926e7d4f 138 Pfam PF03610 PTS system fructose IIA component 4 105 9.4E-12 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_01010 08f2031d7c50027d1b8a54ec926e7d4f 138 Gene3D G3DSA:3.40.50.510 1 135 9.6E-25 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01010 08f2031d7c50027d1b8a54ec926e7d4f 138 SUPERFAMILY SSF53062 1 121 9.55E-22 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 Gene3D G3DSA:1.10.455.10 2 156 7.5E-65 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 SUPERFAMILY SSF47973 5 149 6.8E-63 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 155 3.2E-68 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.37 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 PIRSF PIRSF002122 4 156 1.1E-60 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.3E-67 T 14-10-2018 IPR023798 Ribosomal protein S7 domain DKL56_06165 dea8eb999c6a6823d78a924ffe1aac09 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03440 753eadbd75867bc5893d2603e83d575e 231 Gene3D G3DSA:3.40.50.1580 1 231 8.8E-54 T 14-10-2018 DKL56_03440 753eadbd75867bc5893d2603e83d575e 231 Pfam PF01048 Phosphorylase superfamily 2 227 7.5E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DKL56_03440 753eadbd75867bc5893d2603e83d575e 231 SUPERFAMILY SSF53167 1 228 4.06E-56 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DKL56_03440 753eadbd75867bc5893d2603e83d575e 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 6.8E-44 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DKL56_02935 2ba4c0ea9255fb238aa980a6a866f809 324 SUPERFAMILY SSF52540 5 272 9.73E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02935 2ba4c0ea9255fb238aa980a6a866f809 324 Gene3D G3DSA:3.30.450.90 1 108 4.1E-18 T 14-10-2018 DKL56_02935 2ba4c0ea9255fb238aa980a6a866f809 324 Pfam PF00437 Type II/IV secretion system protein 11 267 7.3E-48 T 14-10-2018 IPR001482 Type II/IV secretion system protein DKL56_02935 2ba4c0ea9255fb238aa980a6a866f809 324 Gene3D G3DSA:3.40.50.300 112 288 6.1E-51 T 14-10-2018 DKL56_05060 ad30c7bc97ed25d4674cb05bafe12a04 199 Pfam PF01966 HD domain 30 142 1.1E-12 T 14-10-2018 IPR006674 HD domain DKL56_05060 ad30c7bc97ed25d4674cb05bafe12a04 199 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 24 192 2.9E-44 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 DKL56_05060 ad30c7bc97ed25d4674cb05bafe12a04 199 Gene3D G3DSA:1.10.3210.10 6 196 1.5E-55 T 14-10-2018 DKL56_05060 ad30c7bc97ed25d4674cb05bafe12a04 199 SMART SM00471 26 153 1.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain DKL56_05060 ad30c7bc97ed25d4674cb05bafe12a04 199 SUPERFAMILY SSF109604 17 195 2.88E-31 T 14-10-2018 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Gene3D G3DSA:3.80.10.10 352 613 2.0E-9 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 300 324 1.3E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 226 246 2.2E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 274 299 1.6E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 406 430 9.1E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 354 378 9.6E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 326 352 6.3E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 380 404 7.0E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 248 272 1.2E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 776 813 6.1E-4 T 14-10-2018 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Pfam PF00746 LPXTG cell wall anchor motif 770 805 5.8E-4 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Gene3D G3DSA:3.10.20.320 639 716 1.7E-23 T 14-10-2018 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 340 441 6.7E-21 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 229 332 2.6E-24 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 SUPERFAMILY SSF52058 237 479 4.08E-21 T 14-10-2018 DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Pfam PF06458 MucBP domain 645 707 2.3E-13 T 14-10-2018 IPR009459 MucBP domain DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Pfam PF06458 MucBP domain 541 610 0.0057 T 14-10-2018 IPR009459 MucBP domain DKL56_07295 f08b1edbe17b60c85402f6cd6f08069b 813 Gene3D G3DSA:3.80.10.10 93 342 5.0E-17 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 Pfam PF13393 Histidyl-tRNA synthetase 8 310 5.3E-47 T 14-10-2018 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 PIRSF PIRSF001549 1 423 7.0E-120 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 Pfam PF03129 Anticodon binding domain 336 419 1.1E-13 T 14-10-2018 IPR004154 Anticodon-binding DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 SUPERFAMILY SSF52954 331 418 3.47E-20 T 14-10-2018 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 SUPERFAMILY SSF55681 3 323 1.51E-98 T 14-10-2018 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 411 4.6E-150 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 428 32.836 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 Gene3D G3DSA:3.40.50.800 327 422 6.6E-21 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DKL56_04210 12b77bc0fa831fcdbd208ad907d97cbd 428 Gene3D G3DSA:3.30.930.10 1 326 2.8E-114 T 14-10-2018 DKL56_05860 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 110 158 3.4E-11 T 14-10-2018 IPR024968 SLAP domain DKL56_05860 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 49 98 1.3E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_05860 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 3 27 5.9E-5 T 14-10-2018 IPR024968 SLAP domain DKL56_05840 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 110 158 3.4E-11 T 14-10-2018 IPR024968 SLAP domain DKL56_05840 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 49 98 1.3E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_05840 d84b868fd81522fdc6cbc01a81648142 163 Pfam PF03217 SLAP domain 3 27 5.9E-5 T 14-10-2018 IPR024968 SLAP domain DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 358 39.231 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Pfam PF03462 PCRF domain 13 205 3.6E-72 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 SMART SM00937 66 180 1.4E-57 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Pfam PF00472 RF-1 domain 213 322 1.6E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Gene3D G3DSA:3.30.160.20 212 298 2.1E-97 T 14-10-2018 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Gene3D G3DSA:1.20.58.410 3 96 3.1E-8 T 14-10-2018 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 358 6.2E-159 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 SUPERFAMILY SSF75620 11 354 2.35E-131 T 14-10-2018 DKL56_03175 b98136d4bb2eacbae6d3d8e8dd11c5bd 362 Gene3D G3DSA:3.30.70.1660 113 343 2.1E-97 T 14-10-2018 DKL56_02325 73b5cfb874b0c79af1fbbaec9a67232b 235 Gene3D G3DSA:3.20.20.80 34 231 5.5E-18 T 14-10-2018 DKL56_02325 73b5cfb874b0c79af1fbbaec9a67232b 235 Pfam PF01183 Glycosyl hydrolases family 25 57 206 9.9E-11 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 DKL56_02325 73b5cfb874b0c79af1fbbaec9a67232b 235 SUPERFAMILY SSF51445 43 232 4.62E-24 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 Gene3D G3DSA:3.10.310.30 313 436 7.2E-30 T 14-10-2018 DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 Pfam PF01368 DHH family 76 219 1.0E-11 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 SUPERFAMILY SSF64182 51 434 3.92E-114 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 Gene3D G3DSA:3.90.1640.30 51 312 6.4E-93 T 14-10-2018 DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 564 747 4.2E-20 T 14-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 548 4.6E-163 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DKL56_04430 3b458d2bbfffc9480226c67ab05742b7 758 Pfam PF02272 DHHA1 domain 300 431 1.0E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 409 456 8.1E-17 T 14-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 4 86 8.7E-16 T 14-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Pfam PF17126 RsmF rRNA methyltransferase first C-terminal domain 341 392 5.7E-11 T 14-10-2018 IPR031340 Ribosomal RNA small subunit methyltransferase F, first C-terminal domain DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Gene3D G3DSA:2.30.130.60 399 456 2.5E-17 T 14-10-2018 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Gene3D G3DSA:3.40.50.150 89 398 2.5E-89 T 14-10-2018 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Gene3D G3DSA:3.30.70.3130 1 85 3.3E-25 T 14-10-2018 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 SUPERFAMILY SSF53335 2 294 5.93E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 Pfam PF01189 16S rRNA methyltransferase RsmB/F 90 294 1.0E-45 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 168 180 2.1E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 72 86 2.1E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 101 111 2.1E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 218 234 2.1E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_04035 7eabb14b6a8d95d9a08f184249f4b1b6 456 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 278 295 2.1E-22 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DKL56_02120 856dd76acd316d583ca7df843dbae8f3 248 Pfam PF02517 CAAX protease self-immunity 141 237 8.5E-5 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 Gene3D G3DSA:3.20.20.70 1 294 6.8E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 5.2E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 5.2E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 5.2E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 5.2E-32 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 SUPERFAMILY SSF51569 10 286 5.86E-87 T 14-10-2018 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 PIRSF PIRSF001365 2 296 1.7E-83 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 286 7.3E-89 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 Pfam PF00701 Dihydrodipicolinate synthetase family 7 286 1.1E-87 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 291 56.056 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DKL56_07500 7da7acc91d113e1c953d2e511db7782a 307 SMART SM01130 5 290 2.3E-104 T 14-10-2018 IPR002220 DapA-like GO:0016829 DKL56_01390 813dd7273db6e97c511482285c832ca9 387 Gene3D G3DSA:3.40.50.10490 2 204 3.4E-58 T 14-10-2018 DKL56_01390 813dd7273db6e97c511482285c832ca9 387 Gene3D G3DSA:3.40.50.10490 205 381 3.2E-57 T 14-10-2018 DKL56_01390 813dd7273db6e97c511482285c832ca9 387 SUPERFAMILY SSF53697 17 378 4.98E-47 T 14-10-2018 DKL56_01390 813dd7273db6e97c511482285c832ca9 387 Pfam PF01380 SIS domain 57 191 1.2E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_00615 a0e9289b0043ed67cc759fac44ec43d0 234 Gene3D G3DSA:3.40.50.1220 16 222 2.5E-54 T 14-10-2018 DKL56_00615 a0e9289b0043ed67cc759fac44ec43d0 234 Pfam PF02146 Sir2 family 25 193 3.8E-42 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 DKL56_00615 a0e9289b0043ed67cc759fac44ec43d0 234 SUPERFAMILY SSF52467 4 230 4.53E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKL56_00615 a0e9289b0043ed67cc759fac44ec43d0 234 Gene3D G3DSA:3.30.1600.10 34 163 2.5E-54 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 SUPERFAMILY SSF69065 7 160 6.63E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 11 226 1.3E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 SMART SM00358 163 228 1.1E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 Gene3D G3DSA:3.30.160.20 158 228 9.7E-17 T 14-10-2018 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 ProSitePatterns PS00517 Ribonuclease III family signature. 46 54 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 224 29.024 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 SUPERFAMILY SSF54768 118 227 5.5E-18 T 14-10-2018 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 Pfam PF14622 Ribonuclease-III-like 20 150 2.2E-30 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 Pfam PF00035 Double-stranded RNA binding motif 163 227 1.4E-15 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 Gene3D G3DSA:1.10.1520.10 3 155 1.3E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DKL56_04660 ffd4f1b51e24fa673facc6fb062af6e0 228 SMART SM00535 22 157 2.3E-54 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DKL56_02890 a42aea46a675f33d0f25bf793e28e432 122 Pfam PF13473 Cupredoxin-like domain 13 121 1.8E-25 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain DKL56_02890 a42aea46a675f33d0f25bf793e28e432 122 SUPERFAMILY SSF49503 13 121 2.5E-12 T 14-10-2018 IPR008972 Cupredoxin DKL56_02890 a42aea46a675f33d0f25bf793e28e432 122 Gene3D G3DSA:2.60.40.420 25 122 2.6E-29 T 14-10-2018 IPR008972 Cupredoxin DKL56_07540 886eb16bcb0e24c239f9ad1e7c287679 394 SUPERFAMILY SSF103473 16 389 1.96E-42 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07540 886eb16bcb0e24c239f9ad1e7c287679 394 Gene3D G3DSA:1.20.1250.20 10 385 1.2E-35 T 14-10-2018 DKL56_07540 886eb16bcb0e24c239f9ad1e7c287679 394 Pfam PF07690 Major Facilitator Superfamily 28 349 1.0E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SUPERFAMILY SSF56672 486 891 7.89E-151 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:1.10.150.20 671 815 1.6E-105 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 176 270 7.9E-31 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:1.10.150.20 179 252 1.2E-90 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SUPERFAMILY SSF47807 176 291 5.23E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 172 2.1E-50 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SUPERFAMILY SSF88723 4 172 2.26E-50 T 14-10-2018 IPR029060 PIN-like domain superfamily DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SMART SM00482 647 855 1.2E-108 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:3.30.420.10 313 504 9.2E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:3.40.50.1010 6 283 1.2E-90 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 ProSitePatterns PS00447 DNA polymerase family A signature. 717 736 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:1.20.1060.10 506 619 8.9E-42 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 TIGRFAM TIGR00593 pola: DNA polymerase I 6 891 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Pfam PF00476 DNA polymerase family A 514 888 4.9E-154 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SMART SM00279 178 213 9.9E-15 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SUPERFAMILY SSF53098 325 482 4.1E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SMART SM00475 4 267 4.7E-129 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 Gene3D G3DSA:3.30.70.370 625 887 1.6E-105 T 14-10-2018 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 639 654 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 616 638 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 765 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 808 824 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 662 685 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 851 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 692 705 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 PRINTS PR00868 DNA-polymerase family A (pol I) signature 717 742 1.4E-75 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_05145 558cc92bca734617e195a6ffbc6c24f1 891 SMART SM00474 306 481 3.1E-4 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DKL56_03090 8f45862fda49848de27551657f317fa9 397 ProSitePatterns PS00217 Sugar transport proteins signature 2. 105 130 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DKL56_03090 8f45862fda49848de27551657f317fa9 397 Gene3D G3DSA:1.20.1250.20 7 384 1.6E-37 T 14-10-2018 DKL56_03090 8f45862fda49848de27551657f317fa9 397 Pfam PF07690 Major Facilitator Superfamily 17 351 1.7E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_03090 8f45862fda49848de27551657f317fa9 397 SUPERFAMILY SSF103473 9 395 4.97E-44 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_06750 36159f5601c5676b5e34383f96db46fb 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 179 2.3E-33 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_06750 36159f5601c5676b5e34383f96db46fb 205 SMART SM01207 8 183 1.2E-35 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_06750 36159f5601c5676b5e34383f96db46fb 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 13.385 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_04250 781cb013c867b237e03628055b16b66b 465 Gene3D G3DSA:3.50.50.60 18 455 3.6E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_04250 781cb013c867b237e03628055b16b66b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 20 39 4.7E-6 T 14-10-2018 DKL56_04250 781cb013c867b237e03628055b16b66b 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 4.7E-6 T 14-10-2018 DKL56_04250 781cb013c867b237e03628055b16b66b 465 Gene3D G3DSA:3.90.700.10 252 399 3.6E-156 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04250 781cb013c867b237e03628055b16b66b 465 SUPERFAMILY SSF51905 14 464 6.21E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_04250 781cb013c867b237e03628055b16b66b 465 Pfam PF00890 FAD binding domain 19 443 1.6E-99 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04250 781cb013c867b237e03628055b16b66b 465 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 19 454 2.9E-148 T 14-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 DKL56_04250 781cb013c867b237e03628055b16b66b 465 SUPERFAMILY SSF56425 251 399 2.54E-43 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 37.281 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 238 7.9E-99 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 Gene3D G3DSA:3.30.70.980 133 204 7.9E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 Gene3D G3DSA:3.30.70.980 84 236 7.9E-56 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 Pfam PF01709 Transcriptional regulator 5 237 1.3E-97 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 SUPERFAMILY SSF75625 3 239 1.7E-93 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DKL56_02920 52f16f70d168cd405c34a0f22ef2be85 241 Gene3D G3DSA:1.10.10.200 1 81 1.5E-34 T 14-10-2018 IPR017856 Integrase-like, N-terminal DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 Pfam PF00005 ABC transporter 400 548 1.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 Pfam PF00664 ABC transporter transmembrane region 37 315 1.2E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 SUPERFAMILY SSF52540 372 616 1.49E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 SUPERFAMILY SSF90123 24 347 1.18E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 SMART SM00382 408 580 8.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 Gene3D G3DSA:1.20.1560.10 3 348 2.1E-87 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 ProSitePatterns PS00211 ABC transporters family signature. 520 534 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00950 1a35c5798877c84a2edf28846e87c71f 622 Gene3D G3DSA:3.40.50.300 379 622 1.2E-80 T 14-10-2018 DKL56_06565 761fc4397722a5430bdd6774fc29a041 444 Pfam PF02378 Phosphotransferase system, EIIC 28 368 2.8E-47 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_06565 761fc4397722a5430bdd6774fc29a041 444 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 442 1.3E-108 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_06565 761fc4397722a5430bdd6774fc29a041 444 PIRSF PIRSF006351 1 444 4.2E-120 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 291 5.1E-44 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00691 Adhesin B signature 81 100 4.2E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00691 Adhesin B signature 259 276 4.2E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00691 Adhesin B signature 36 57 4.2E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 SUPERFAMILY SSF53807 33 293 1.32E-58 T 14-10-2018 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00690 Adhesin family signature 263 281 2.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00690 Adhesin family signature 68 81 2.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00690 Adhesin family signature 36 54 2.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 PRINTS PR00690 Adhesin family signature 81 98 2.4E-12 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DKL56_06945 98a557a99542b74404c2537fa69f2cc3 296 Gene3D G3DSA:3.40.50.1980 35 185 1.9E-36 T 14-10-2018 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 Gene3D G3DSA:3.20.20.100 4 287 1.1E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 47 64 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 SUPERFAMILY SSF51430 11 275 7.2E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PRINTS PR00069 Aldo-keto reductase signature 208 232 9.2E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PRINTS PR00069 Aldo-keto reductase signature 171 200 9.2E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PRINTS PR00069 Aldo-keto reductase signature 99 117 9.2E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PRINTS PR00069 Aldo-keto reductase signature 137 154 9.2E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PRINTS PR00069 Aldo-keto reductase signature 43 67 9.2E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 PIRSF PIRSF000097 6 285 2.1E-83 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 Pfam PF00248 Aldo/keto reductase family 23 272 1.9E-49 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DKL56_00310 30c3102ff57db233bfd81737fab29efa 287 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 241 256 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 3.0E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 8.0E-29 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.47 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 Gene3D G3DSA:1.20.5.710 3 51 4.2E-19 T 14-10-2018 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 3.7E-19 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 SUPERFAMILY SSF48300 3 51 2.88E-14 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 SUPERFAMILY SSF54736 55 121 1.41E-22 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 Gene3D G3DSA:3.30.1390.10 52 121 7.1E-28 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DKL56_05630 5b0ff7520dc5f402d4d87b5fde4044f2 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.4E-43 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Gene3D G3DSA:3.30.1480.10 1 124 2.7E-45 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SUPERFAMILY SSF54814 199 276 3.47E-31 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SUPERFAMILY SSF69705 1 126 2.09E-41 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Gene3D G3DSA:2.40.50.140 136 197 6.7E-21 T 14-10-2018 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Pfam PF13184 NusA-like KH domain 229 297 2.4E-31 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SMART SM00322 302 372 4.2E-5 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SMART SM00322 229 301 7.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Gene3D G3DSA:3.30.300.20 277 404 3.8E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Pfam PF08529 NusA N-terminal domain 4 124 9.2E-41 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 395 29.609 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SUPERFAMILY SSF54814 278 344 3.86E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SMART SM00316 133 199 2.4E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 SUPERFAMILY SSF50249 132 198 4.15E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 343 4.7E-132 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DKL56_04490 670bfaebdbfccf3fad4a04fbff165b35 404 Gene3D G3DSA:3.30.300.20 198 276 1.3E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_00985 225ac1f9943e6cd6c933425b594943cf 267 Pfam PF00005 ABC transporter 25 180 9.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00985 225ac1f9943e6cd6c933425b594943cf 267 SUPERFAMILY SSF52540 2 231 1.05E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00985 225ac1f9943e6cd6c933425b594943cf 267 SMART SM00382 34 229 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00985 225ac1f9943e6cd6c933425b594943cf 267 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00985 225ac1f9943e6cd6c933425b594943cf 267 Gene3D G3DSA:3.40.50.300 2 260 4.5E-57 T 14-10-2018 DKL56_06720 6322cc2702c971e90a44fa04e60227dd 217 SUPERFAMILY SSF109604 3 216 1.5E-56 T 14-10-2018 DKL56_06720 6322cc2702c971e90a44fa04e60227dd 217 Gene3D G3DSA:1.10.472.50 1 102 4.1E-20 T 14-10-2018 DKL56_06720 6322cc2702c971e90a44fa04e60227dd 217 Gene3D G3DSA:1.20.58.1910 104 217 3.3E-42 T 14-10-2018 DKL56_06705 d150110c60bd3548c28920cbd7ecc319 356 SUPERFAMILY SSF53822 40 265 1.13E-14 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_06705 d150110c60bd3548c28920cbd7ecc319 356 Gene3D G3DSA:3.40.50.2300 146 351 2.6E-94 T 14-10-2018 DKL56_06705 d150110c60bd3548c28920cbd7ecc319 356 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 44 340 4.4E-61 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DKL56_06705 d150110c60bd3548c28920cbd7ecc319 356 Gene3D G3DSA:3.40.50.2300 42 320 2.6E-94 T 14-10-2018 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SUPERFAMILY SSF49785 848 993 9.35E-13 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Gene3D G3DSA:2.60.40.1760 15 236 1.9E-30 T 14-10-2018 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Gene3D G3DSA:3.20.20.80 370 545 9.6E-33 T 14-10-2018 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SUPERFAMILY SSF51011 513 604 3.74E-14 T 14-10-2018 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SUPERFAMILY SSF51445 226 507 2.11E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SUPERFAMILY SSF74650 6 224 2.86E-29 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Gene3D G3DSA:2.60.40.1180 546 603 5.7E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SUPERFAMILY SSF49265 772 853 2.32E-8 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Gene3D G3DSA:2.60.40.1180 609 730 2.7E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 SMART SM00060 774 844 3.8E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Pfam PF01055 Glycosyl hydrolases family 31 378 607 5.9E-41 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Pfam PF17137 Domain of unknown function (DUF5110) 614 673 1.0E-6 T 14-10-2018 IPR033403 Domain of unknown function DUF5110 DKL56_07220 1a9766ba8c5c2683549b98937c4599d0 996 Gene3D G3DSA:2.60.120.260 860 992 7.8E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DKL56_04605 2669e073176734d6fade6b98da53f963 255 SUPERFAMILY SSF53167 65 254 1.2E-42 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DKL56_04605 2669e073176734d6fade6b98da53f963 255 Gene3D G3DSA:3.40.50.1580 42 255 4.2E-36 T 14-10-2018 DKL56_04605 2669e073176734d6fade6b98da53f963 255 Pfam PF01048 Phosphorylase superfamily 49 241 4.9E-26 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 Gene3D G3DSA:3.30.420.40 5 318 9.4E-122 T 14-10-2018 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 SUPERFAMILY SSF53067 3 139 1.04E-34 T 14-10-2018 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 Pfam PF06723 MreB/Mbl protein 3 327 3.6E-139 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 5.9E-128 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 Gene3D G3DSA:3.90.640.10 177 250 9.4E-122 T 14-10-2018 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 40 58 9.2E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 291 317 9.2E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 60 83 9.2E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 123 142 9.2E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 178 198 9.2E-50 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 Gene3D G3DSA:3.30.420.40 145 308 9.4E-122 T 14-10-2018 DKL56_03240 ba4d124c9819f380b546ae08b48cf95d 329 SUPERFAMILY SSF53067 140 326 3.81E-48 T 14-10-2018 DKL56_02335 238073fd7432ae191ea5b575ea630851 442 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 429 4.5E-87 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_02335 238073fd7432ae191ea5b575ea630851 442 PIRSF PIRSF006351 1 435 7.4E-113 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_02335 238073fd7432ae191ea5b575ea630851 442 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.5E-41 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Gene3D G3DSA:3.20.20.60 236 576 1.4E-121 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 2.1E-28 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 2.1E-28 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 2.1E-28 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 2.1E-28 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 PIRSF PIRSF000732 1 577 1.3E-214 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Gene3D G3DSA:1.10.274.10 24 148 1.4E-76 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 6.5E-33 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Gene3D G3DSA:3.50.30.10 7 235 1.4E-76 T 14-10-2018 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 569 2.9E-229 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 1.0E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 SUPERFAMILY SSF47831 24 145 1.19E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 SUPERFAMILY SSF51621 251 551 2.2E-110 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 543 5.0E-124 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DKL56_02465 b604720399ab3d806c0e2fda72224f78 577 SUPERFAMILY SSF52009 127 247 1.83E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 40.284 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 Gene3D G3DSA:3.40.630.20 1 214 1.8E-77 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 202 1.2E-75 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 Pfam PF01470 Pyroglutamyl peptidase 1 201 1.3E-93 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PIRSF PIRSF015592 1 213 1.7E-84 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 4.2E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 4.2E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 4.2E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 4.2E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 4.2E-46 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 DKL56_05495 3fb8fb12db560e119eba79a378d5b765 215 SUPERFAMILY SSF53182 1 206 4.32E-71 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 112 136 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 SUPERFAMILY SSF53623 105 354 1.96E-38 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Gene3D G3DSA:3.90.190.20 362 521 2.6E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 SUPERFAMILY SSF63418 31 104 1.96E-9 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 12 511 27.115 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Pfam PF08245 Mur ligase middle domain 114 335 2.5E-26 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 SUPERFAMILY SSF53244 356 510 1.98E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 30 511 9.6E-88 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Gene3D G3DSA:3.40.1390.10 12 104 9.3E-9 T 14-10-2018 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Pfam PF02875 Mur ligase family, glutamate ligase domain 356 440 5.3E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DKL56_00975 e7ef0176d142b68e723934c5ac597903 522 Gene3D G3DSA:3.40.1190.10 105 357 4.3E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 143 1.1E-4 T 14-10-2018 IPR004176 Clp, N-terminal DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 6.9E-11 T 14-10-2018 IPR004176 Clp, N-terminal DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 313 325 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:3.40.50.300 508 730 3.8E-86 T 14-10-2018 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SMART SM00382 555 694 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SMART SM00382 218 360 1.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 223 335 4.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:3.40.50.300 167 361 5.0E-68 T 14-10-2018 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:4.10.860.10 428 485 5.1E-40 T 14-10-2018 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 589 607 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 633 651 2.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 666 680 2.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 577 2.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 2.5E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:1.10.8.60 731 831 2.9E-25 T 14-10-2018 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SMART SM01086 731 820 8.0E-30 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:1.10.8.60 364 499 5.1E-40 T 14-10-2018 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SUPERFAMILY SSF52540 179 500 2.12E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF07724 AAA domain (Cdc48 subfamily) 554 724 1.5E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Gene3D G3DSA:1.10.1780.10 1 152 9.0E-30 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 731 810 2.4E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SUPERFAMILY SSF81923 4 143 2.65E-20 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 Pfam PF02151 UvrB/uvrC motif 437 469 8.4E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 DKL56_06195 7be58df38b84fa69de3caded774e01f1 834 SUPERFAMILY SSF52540 504 813 4.35E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00240 4f1b334d27489d9c73bb432b056c0254 258 Pfam PF06182 ABC-2 family transporter protein 36 257 7.6E-31 T 14-10-2018 IPR010390 Protein of unknown function DUF990 DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 SUPERFAMILY SSF51735 3 255 5.99E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 Gene3D G3DSA:3.40.50.720 1 262 2.6E-66 T 14-10-2018 DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 Pfam PF00106 short chain dehydrogenase 8 195 1.3E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DKL56_03620 94f81f8a4214083d7bf23a9735d80a60 264 PIRSF PIRSF000126 1 263 1.8E-53 T 14-10-2018 DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 302 49.538 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 Gene3D G3DSA:1.10.150.130 6 103 2.6E-22 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 94 5.3E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 Pfam PF00589 Phage integrase family 116 288 1.1E-47 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 SUPERFAMILY SSF56349 13 294 2.0E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 13 303 2.5E-102 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DKL56_03830 375f94b75c4d525df460c5ab72f2cb79 309 Gene3D G3DSA:1.10.443.10 117 296 4.9E-59 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DKL56_02520 3d5fb43625635b81420a17befbf5e64a 126 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 2 121 2.5E-31 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DKL56_02520 3d5fb43625635b81420a17befbf5e64a 126 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 5 123 2.0E-36 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DKL56_02520 3d5fb43625635b81420a17befbf5e64a 126 SUPERFAMILY SSF141530 1 124 1.83E-32 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_02520 3d5fb43625635b81420a17befbf5e64a 126 Gene3D G3DSA:2.40.33.40 1 125 2.0E-36 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 9 926 5.1E-199 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Gene3D G3DSA:3.30.420.10 3 178 6.4E-40 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Gene3D G3DSA:3.40.50.300 728 925 3.2E-28 T 14-10-2018 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Gene3D G3DSA:3.40.50.300 258 502 2.4E-25 T 14-10-2018 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 6 929 22.895 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Pfam PF04851 Type III restriction enzyme, res subunit 259 470 2.2E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 SMART SM00479 9 176 5.4E-32 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 SUPERFAMILY SSF52540 282 893 6.3E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Pfam PF00929 Exonuclease 12 164 6.2E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 SUPERFAMILY SSF53098 9 189 8.29E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 172 3.9E-25 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 Pfam PF13307 Helicase C-terminal domain 755 910 4.4E-29 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DKL56_03995 fb10473742fc50d0b0f1bef5b3e14ae3 937 SMART SM00491 768 898 9.7E-17 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 SUPERFAMILY SSF52540 4 243 3.41E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 Gene3D G3DSA:2.40.50.140 276 337 8.7E-6 T 14-10-2018 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 Gene3D G3DSA:2.40.50.100 259 342 8.7E-6 T 14-10-2018 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 Pfam PF08402 TOBE domain 273 342 7.0E-11 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 SMART SM00382 29 212 6.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 Pfam PF00005 ABC transporter 20 162 6.0E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 SUPERFAMILY SSF50331 239 344 6.8E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DKL56_07470 06e43c829fd5bd12a8312886c12cd13c 346 Gene3D G3DSA:3.40.50.300 1 238 2.3E-81 T 14-10-2018 DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 Gene3D G3DSA:3.40.1160.10 2 239 6.7E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 Pfam PF00696 Amino acid kinase family 7 217 2.2E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.878 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 PIRSF PIRSF005650 1 241 3.7E-96 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 SUPERFAMILY SSF53633 4 238 6.68E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DKL56_04530 3fd3b92ea679481573f44cb2c248c1ff 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 238 9.0E-100 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DKL56_02090 641eb7557d576a56867efc6db2bbce4d 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 1.3E-36 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02090 641eb7557d576a56867efc6db2bbce4d 310 SUPERFAMILY SSF161098 89 288 3.11E-17 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02090 641eb7557d576a56867efc6db2bbce4d 310 Gene3D G3DSA:1.10.3720.10 83 300 2.4E-19 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 277 2.4E-97 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 Gene3D G3DSA:1.10.1580.10 181 271 4.9E-14 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 Gene3D G3DSA:3.40.50.300 4 178 9.1E-42 T 14-10-2018 DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 SUPERFAMILY SSF52540 10 193 8.44E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 Pfam PF01926 50S ribosome-binding GTPase 123 216 8.7E-16 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_03765 cbc651166498ee5a0c51d0711c913c26 279 PIRSF PIRSF006230 1 279 4.7E-95 T 14-10-2018 IPR016478 GTPase, MTG1 DKL56_03400 f81ab6c6c3ecf8a323c83f251ca2ec08 146 Pfam PF04472 Cell division protein SepF 60 128 5.3E-26 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 DKL56_03400 f81ab6c6c3ecf8a323c83f251ca2ec08 146 Hamap MF_01197 Cell division protein SepF [sepF]. 1 139 19.06 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 DKL56_03400 f81ab6c6c3ecf8a323c83f251ca2ec08 146 Gene3D G3DSA:3.30.110.150 54 145 1.1E-29 T 14-10-2018 IPR038594 SepF-like superfamily DKL56_05790 309c78f5c038679c1d4d794530eeed88 194 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 3 170 5.1E-44 T 14-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 DKL56_05790 309c78f5c038679c1d4d794530eeed88 194 Pfam PF01965 DJ-1/PfpI family 3 167 1.8E-35 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DKL56_05790 309c78f5c038679c1d4d794530eeed88 194 SUPERFAMILY SSF52317 1 170 1.05E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_05790 309c78f5c038679c1d4d794530eeed88 194 Gene3D G3DSA:3.40.50.880 2 171 8.1E-38 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 SUPERFAMILY SSF54197 4 142 8.04E-40 T 14-10-2018 IPR036265 HIT-like superfamily DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 Pfam PF01230 HIT domain 15 112 3.1E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 PRINTS PR00332 Histidine triad family signature 30 48 2.5E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 PRINTS PR00332 Histidine triad family signature 9 25 2.5E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 PRINTS PR00332 Histidine triad family signature 98 108 2.5E-14 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 ProSitePatterns PS00892 HIT domain signature. 91 109 - T 14-10-2018 IPR019808 Histidine triad, conserved site DKL56_05190 887f8a515c71190b604fac0a28ed5057 143 Gene3D G3DSA:3.30.428.10 3 143 3.6E-40 T 14-10-2018 IPR036265 HIT-like superfamily DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 7 305 1.0E-60 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 PIRSF PIRSF000401 1 313 6.2E-82 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 Gene3D G3DSA:3.40.50.150 117 313 2.3E-61 T 14-10-2018 DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 SUPERFAMILY SSF53335 95 307 5.53E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 30.041 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DKL56_04230 d0d702cf6c9fa6d981ce97878b7233a4 314 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 6 310 9.6E-74 T 14-10-2018 DKL56_07290 1e75dfa84eb022c80f968c728691b81d 254 Pfam PF06458 MucBP domain 112 172 6.3E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07290 1e75dfa84eb022c80f968c728691b81d 254 Gene3D G3DSA:3.10.20.320 106 186 3.5E-21 T 14-10-2018 DKL56_07210 f247372482a8aa22c8bebdc00900e117 223 Pfam PF00117 Glutamine amidotransferase class-I 42 172 4.4E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase DKL56_07210 f247372482a8aa22c8bebdc00900e117 223 SUPERFAMILY SSF52317 8 203 6.27E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_07210 f247372482a8aa22c8bebdc00900e117 223 Gene3D G3DSA:3.40.50.880 2 217 8.6E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.4E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 Gene3D G3DSA:1.10.10.250 72 140 2.3E-29 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.141 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 Gene3D G3DSA:3.30.1550.10 2 71 1.4E-32 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.2E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 8.5E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 SUPERFAMILY SSF54747 3 72 1.96E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 8.0E-16 T 14-10-2018 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 SMART SM00649 9 140 9.6E-85 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DKL56_05675 d4c07ede5fdd92c040fca20f0d5f959e 141 SUPERFAMILY SSF46906 67 140 1.44E-28 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 Gene3D G3DSA:3.40.50.300 6 432 9.5E-180 T 14-10-2018 DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 Gene3D G3DSA:3.30.1510.10 131 249 9.5E-180 T 14-10-2018 DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 558 44.707 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 Pfam PF01268 Formate--tetrahydrofolate ligase 2 558 1.5E-239 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 SUPERFAMILY SSF52540 4 556 6.69E-218 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03930 bef0e96951f0dd00ba949b9f38e0ec77 558 Gene3D G3DSA:3.10.410.10 445 534 3.7E-30 T 14-10-2018 DKL56_07800 61338846eb4c4f4e89b260a939e32f05 435 PIRSF PIRSF005353 1 434 3.0E-161 T 14-10-2018 IPR026033 Purine permease PbuG-like DKL56_07800 61338846eb4c4f4e89b260a939e32f05 435 Pfam PF00860 Permease family 20 392 3.1E-42 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 SUPERFAMILY SSF53223 2 119 4.12E-32 T 14-10-2018 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 SUPERFAMILY SSF51735 121 277 2.7E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 202 231 9.2E-69 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 280 34.299 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 279 6.5E-63 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 Gene3D G3DSA:3.40.50.720 5 256 3.4E-102 T 14-10-2018 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 119 1.0E-31 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DKL56_04820 a8a3b5dd5a44917fd1da3ab7a8e47606 282 Gene3D G3DSA:3.40.50.10860 7 273 3.4E-102 T 14-10-2018 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1181 22.156 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Gene3D G3DSA:1.20.1060.20 493 677 3.9E-53 T 14-10-2018 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1179 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Gene3D G3DSA:3.30.70.1620 575 665 3.9E-53 T 14-10-2018 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1172 1.0E-58 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 SUPERFAMILY SSF75553 477 684 1.7E-48 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Gene3D G3DSA:3.40.50.300 3 257 2.4E-55 T 14-10-2018 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 PIRSF PIRSF005719 1 1186 5.4E-302 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Gene3D G3DSA:3.40.50.300 1026 1187 6.1E-50 T 14-10-2018 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 SUPERFAMILY SSF52540 3 1164 4.83E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 Pfam PF06470 SMC proteins Flexible Hinge Domain 515 635 6.1E-22 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DKL56_04655 ac30ca5d90e2c15029730170543b7bbf 1187 SMART SM00968 515 636 6.7E-31 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DKL56_00430 953c79655245c8f91245b9172801a2a3 302 Pfam PF13349 Putative adhesin 72 301 4.3E-24 T 14-10-2018 IPR025164 Putative adhesin DKL56_03190 88d124f541b5af9adf9279f9434eea41 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.1E-70 T 14-10-2018 DKL56_03190 88d124f541b5af9adf9279f9434eea41 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 45.251 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DKL56_03190 88d124f541b5af9adf9279f9434eea41 209 SUPERFAMILY SSF53271 5 207 7.6E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_03190 88d124f541b5af9adf9279f9434eea41 209 Gene3D G3DSA:3.40.50.2020 1 209 1.4E-78 T 14-10-2018 DKL56_03190 88d124f541b5af9adf9279f9434eea41 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 1.8E-85 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 SUPERFAMILY SSF52540 7 243 1.22E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 Gene3D G3DSA:3.40.50.300 1 229 8.8E-71 T 14-10-2018 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 Gene3D G3DSA:2.40.50.140 292 345 2.1E-16 T 14-10-2018 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 Pfam PF00005 ABC transporter 23 167 2.0E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 SMART SM00382 32 217 2.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 Gene3D G3DSA:2.40.50.940 230 354 2.1E-16 T 14-10-2018 DKL56_01125 23424171b2f2d046d775fa27d0bddff7 361 SUPERFAMILY SSF50331 248 361 2.55E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 455 33.58 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Gene3D G3DSA:3.40.1190.10 76 308 5.5E-66 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 325 393 8.8E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 SUPERFAMILY SSF53244 312 454 6.04E-31 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Gene3D G3DSA:3.90.190.20 311 455 1.6E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 SUPERFAMILY SSF53623 101 310 1.07E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Gene3D G3DSA:3.40.1390.10 1 75 2.4E-26 T 14-10-2018 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 454 2.0E-119 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Pfam PF01225 Mur ligase family, catalytic domain 24 94 6.2E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 Pfam PF08245 Mur ligase middle domain 107 290 7.6E-50 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_06300 0bd86368b0a8ac400a54ca0eff1cf4c2 455 SUPERFAMILY SSF63418 1 99 4.71E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 290 305 7.0E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 179 199 3.3E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 938 1000 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 598 660 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1210 1272 7.5E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1278 1340 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 802 864 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 666 728 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 392 454 7.9E-7 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1550 1612 4.9E-16 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1482 1544 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 734 796 5.7E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1006 1068 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1619 1680 4.4E-16 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 462 524 1.1E-12 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 530 592 3.2E-16 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1346 1408 3.7E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1142 1204 4.0E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1687 1748 2.2E-17 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1775 1836 1.5E-8 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1414 1476 7.5E-14 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 870 932 2.1E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF06458 MucBP domain 1074 1136 3.6E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 152 238 2.5E-10 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 SUPERFAMILY SSF52058 164 336 3.4E-14 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1770 1845 3.1E-18 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1480 1547 6.6E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1140 1207 8.7E-22 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1073 1139 6.1E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1412 1479 5.4E-22 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1548 1616 7.8E-24 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1276 1343 6.1E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 529 596 2.1E-24 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 665 731 6.0E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1686 1755 4.6E-24 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 389 458 1.2E-12 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 936 1003 6.5E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 597 664 6.4E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1617 1685 2.0E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1208 1275 5.0E-22 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1004 1072 6.4E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 868 935 8.1E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 459 528 3.6E-20 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 1344 1411 3.4E-22 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 732 800 6.9E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.10.20.320 801 867 6.0E-23 T 14-10-2018 DKL56_07280 e09c8a7b4d1620fd5258fbf5c735f801 1882 Gene3D G3DSA:3.80.10.10 89 336 1.3E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 262 1.4E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.6E-66 T 14-10-2018 DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 Gene3D G3DSA:3.40.50.1000 3 262 1.2E-74 T 14-10-2018 IPR023214 HAD superfamily DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 6.0E-28 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 SUPERFAMILY SSF56784 1 267 3.23E-72 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02980 c2acf2c984d7977f0746ef4d763c9f65 268 Gene3D G3DSA:3.30.1240.10 85 192 1.2E-74 T 14-10-2018 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 639 31.491 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 SUPERFAMILY SSF55681 240 530 1.31E-94 T 14-10-2018 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 636 5.1E-202 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Gene3D G3DSA:3.30.980.10 65 221 6.0E-41 T 14-10-2018 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 SUPERFAMILY SSF81271 4 62 3.71E-14 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 SMART SM00863 167 216 6.3E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Gene3D G3DSA:3.40.50.800 537 645 8.5E-33 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 SUPERFAMILY SSF55186 62 239 1.24E-42 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Gene3D G3DSA:3.30.930.10 222 536 1.3E-112 T 14-10-2018 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 SUPERFAMILY SSF52954 533 639 4.08E-31 T 14-10-2018 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 167 215 1.5E-8 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 325 532 1.6E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 511 524 1.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 1.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 1.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 538 550 1.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 468 496 1.2E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Pfam PF02824 TGS domain 5 62 1.7E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Gene3D G3DSA:3.10.20.30 2 64 7.4E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DKL56_05115 2f7b49258de577378d7d87eb7742e164 645 Pfam PF03129 Anticodon binding domain 545 634 5.8E-22 T 14-10-2018 IPR004154 Anticodon-binding DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.478 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 Gene3D G3DSA:1.10.720.90 2 55 4.0E-18 T 14-10-2018 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 9.0E-12 T 14-10-2018 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.4E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 Gene3D G3DSA:1.10.1900.20 56 118 2.9E-27 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 SUPERFAMILY SSF74731 2 117 1.22E-43 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.6E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.6E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.6E-36 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05080 41fcd6c78816ea3843e0160a39c4ebf7 118 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 SUPERFAMILY SSF52283 2 124 2.34E-28 T 14-10-2018 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 25 331 2.3E-22 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 Gene3D G3DSA:3.40.50.720 5 316 1.4E-108 T 14-10-2018 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 SUPERFAMILY SSF51735 104 301 4.05E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 Gene3D G3DSA:3.40.50.720 104 300 1.4E-108 T 14-10-2018 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 114 300 6.5E-52 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DKL56_02320 1e4dba089a28b77d24f1c6557323837a 333 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 Pfam PF00232 Glycosyl hydrolase family 1 3 477 2.4E-134 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 8.3E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 8.3E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 8.3E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 309 323 8.3E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 8.3E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 Gene3D G3DSA:3.20.20.80 1 480 5.6E-154 T 14-10-2018 DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_07245 252a0223d65a3b9e69b2f39b6dc773f9 481 SUPERFAMILY SSF51445 3 473 4.98E-161 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.58 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.2E-92 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 Gene3D G3DSA:3.30.1140.32 107 207 1.2E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 SUPERFAMILY SSF54814 2 105 5.23E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 Pfam PF07650 KH domain 37 109 4.1E-21 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 7.3E-37 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 Gene3D G3DSA:3.30.300.20 17 106 1.2E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 SMART SM00322 59 124 3.0E-11 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DKL56_06120 0dc5d41640035b52cef6e64d9e8e9b37 223 SUPERFAMILY SSF54821 106 205 1.05E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 405 163.674 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 Gene3D G3DSA:3.40.50.620 175 402 2.7E-68 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 SUPERFAMILY SSF52402 174 384 1.28E-47 T 14-10-2018 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 Pfam PF02926 THUMP domain 47 162 3.4E-23 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 3.0E-60 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 SUPERFAMILY SSF143437 3 173 1.74E-53 T 14-10-2018 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 Gene3D G3DSA:3.30.2130.30 1 174 1.0E-52 T 14-10-2018 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 SMART SM00981 74 165 7.1E-25 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DKL56_03300 74d7ca30ff04479797c57e8ff8d2152e 405 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 7.5E-117 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 3 293 16.579 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 227 5.2E-30 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 Pfam PF01867 CRISPR associated protein Cas1 6 227 1.7E-26 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 Gene3D G3DSA:1.20.120.920 90 286 1.5E-30 T 14-10-2018 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 271 3.9E-85 T 14-10-2018 IPR019855 CRISPR-associated protein Cas1, NMENI subtype GO:0004520|GO:0043571|GO:0046872 DKL56_01065 ab01392fd16d14770a8334dc16468b30 304 Gene3D G3DSA:3.100.10.20 5 78 3.9E-8 T 14-10-2018 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 SUPERFAMILY SSF53244 316 456 1.43E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 454 2.2E-121 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Gene3D G3DSA:3.40.1190.10 103 314 2.8E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 SUPERFAMILY SSF51984 6 101 1.18E-15 T 14-10-2018 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 387 5.5E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Gene3D G3DSA:3.40.50.720 10 95 6.5E-27 T 14-10-2018 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 SUPERFAMILY SSF53623 107 314 9.68E-42 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Pfam PF08245 Mur ligase middle domain 118 297 8.6E-25 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 456 32.431 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_03375 07a827f30c57ca41a4c0b2c3f84c5fa0 459 Gene3D G3DSA:3.90.190.20 322 459 2.9E-39 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_03165 01153aeab1f1fb62e64a6122adecdbf6 450 Pfam PF08353 Domain of unknown function (DUF1727) 323 433 5.9E-35 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 DKL56_03165 01153aeab1f1fb62e64a6122adecdbf6 450 Pfam PF08245 Mur ligase middle domain 54 175 1.4E-12 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_03165 01153aeab1f1fb62e64a6122adecdbf6 450 SUPERFAMILY SSF53623 39 300 4.07E-33 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_01105 1101794e99d4942f6b29f6956c566d91 274 SUPERFAMILY SSF52467 2 234 3.18E-18 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 153 7.5E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 605 3.3E-275 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 SUPERFAMILY SSF54980 309 393 1.55E-13 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 SUPERFAMILY SSF52540 4 213 9.21E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Gene3D G3DSA:2.40.50.250 489 605 1.0E-118 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Gene3D G3DSA:3.30.70.870 312 596 1.0E-118 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Gene3D G3DSA:3.40.50.300 6 204 1.9E-66 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Gene3D G3DSA:3.30.70.240 395 488 1.0E-118 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Pfam PF00679 Elongation factor G C-terminus 402 482 9.3E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 SUPERFAMILY SSF54980 404 518 2.93E-27 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Gene3D G3DSA:2.40.30.10 205 305 2.7E-35 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 SMART SM00838 401 489 6.0E-7 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Pfam PF00009 Elongation factor Tu GTP binding domain 8 201 6.5E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Pfam PF14492 Elongation Factor G, domain II 333 383 6.9E-7 T 14-10-2018 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 Pfam PF03144 Elongation factor Tu domain 2 225 294 7.7E-15 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DKL56_03515 a8f751b0338709f57c0a96c171038e77 613 SUPERFAMILY SSF50447 156 305 6.65E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 79 97 4.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 12 32 4.1E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 Hamap MF_00367 GTPase Era [era]. 7 296 37.715 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 Gene3D G3DSA:3.30.300.20 186 300 2.7E-43 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 Pfam PF01926 50S ribosome-binding GTPase 12 125 5.0E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 Gene3D G3DSA:3.40.50.300 4 185 5.9E-47 T 14-10-2018 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 TIGRFAM TIGR00436 era: GTP-binding protein Era 10 279 1.8E-96 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 SUPERFAMILY SSF52540 12 205 6.0E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 Pfam PF07650 KH domain 208 285 1.1E-20 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 168 2.0E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_04140 0de3da8b264cef7750da2d09b868c0fb 302 SUPERFAMILY SSF54814 182 297 3.92E-42 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 SMART SM00354 1 68 2.8E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 SUPERFAMILY SSF47413 3 50 7.51E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 Gene3D G3DSA:3.40.50.2300 74 323 3.1E-37 T 14-10-2018 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 Gene3D G3DSA:3.40.50.2300 158 294 3.1E-37 T 14-10-2018 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 Gene3D G3DSA:1.10.260.40 1 47 8.1E-14 T 14-10-2018 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 SUPERFAMILY SSF53822 114 335 2.36E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 6.0E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DKL56_00135 19c4b644ea147bf875b0f41e7b2d2b57 336 Pfam PF13377 Periplasmic binding protein-like domain 174 334 4.4E-23 T 14-10-2018 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 SMART SM00116 264 312 0.0013 T 14-10-2018 IPR000644 CBS domain DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 SMART SM00116 326 372 2.7 T 14-10-2018 IPR000644 CBS domain DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 Pfam PF00005 ABC transporter 26 170 4.7E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 Pfam PF00571 CBS domain 317 370 9.2E-6 T 14-10-2018 IPR000644 CBS domain DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 Pfam PF00571 CBS domain 258 310 8.0E-8 T 14-10-2018 IPR000644 CBS domain DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 SUPERFAMILY SSF54631 257 378 1.99E-23 T 14-10-2018 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 SUPERFAMILY SSF52540 7 246 7.2E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 SMART SM00382 34 219 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 22 377 8.0E-124 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 Gene3D G3DSA:3.10.580.10 265 376 4.0E-24 T 14-10-2018 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 Gene3D G3DSA:3.40.50.300 4 264 1.3E-74 T 14-10-2018 DKL56_02560 d41502cb16c57bbd7c919fedbb12ba9f 391 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 SUPERFAMILY SSF55021 260 346 4.23E-15 T 14-10-2018 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 Pfam PF09383 NIL domain 273 342 6.3E-13 T 14-10-2018 IPR018449 NIL domain DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 Gene3D G3DSA:3.30.70.260 246 346 6.6E-14 T 14-10-2018 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 SUPERFAMILY SSF52540 3 248 2.59E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 Pfam PF00005 ABC transporter 25 177 1.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 Gene3D G3DSA:3.40.50.300 2 245 1.5E-72 T 14-10-2018 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 SMART SM00930 270 345 3.6E-16 T 14-10-2018 IPR018449 NIL domain DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04310 7ba4cfc1a1fd122ec544bdbda3b30476 353 SMART SM00382 33 244 6.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 SUPERFAMILY SSF47364 110 191 9.94E-19 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 SMART SM00962 208 409 9.3E-106 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 Pfam PF00448 SRP54-type protein, GTPase domain 209 408 1.9E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 SMART SM00382 207 385 3.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 Gene3D G3DSA:1.20.120.140 109 405 4.0E-102 T 14-10-2018 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 382 395 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 Pfam PF02881 SRP54-type protein, helical bundle domain 119 185 6.0E-14 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 SMART SM00963 108 189 2.2E-21 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 Gene3D G3DSA:3.40.50.300 203 397 4.0E-102 T 14-10-2018 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 133 408 2.5E-108 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 SUPERFAMILY SSF52540 206 401 2.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04650 062e9d9fcb2f7ad5d4ed7d5b4fd3a95c 412 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 132 409 59.526 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DKL56_00600 94374a991c7ee96ef6587d4b776ef4a0 210 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 9 196 3.9E-42 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DKL56_00600 94374a991c7ee96ef6587d4b776ef4a0 210 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 5 196 26.455 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DKL56_00600 94374a991c7ee96ef6587d4b776ef4a0 210 SUPERFAMILY SSF50486 4 203 6.43E-55 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DKL56_00600 94374a991c7ee96ef6587d4b776ef4a0 210 Gene3D G3DSA:3.10.300.10 2 207 1.8E-49 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DKL56_00600 94374a991c7ee96ef6587d4b776ef4a0 210 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 7 193 7.3E-46 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 SUPERFAMILY SSF51735 145 310 5.92E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 Gene3D G3DSA:3.40.50.720 158 306 1.7E-83 T 14-10-2018 DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 SUPERFAMILY SSF50129 1 166 6.6E-44 T 14-10-2018 IPR011032 GroES-like superfamily DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 Pfam PF00107 Zinc-binding dehydrogenase 178 289 1.8E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 Gene3D G3DSA:3.90.180.10 5 333 1.7E-83 T 14-10-2018 DKL56_07580 00ac61ef9dc00bcd3052c3a5088f702c 350 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 124 1.8E-20 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DKL56_06445 f6f5fd2cb0710bf5689c7bf0e7fe164a 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 93 3.5E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DKL56_06445 f6f5fd2cb0710bf5689c7bf0e7fe164a 125 Gene3D G3DSA:3.10.180.10 2 125 8.4E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKL56_06445 f6f5fd2cb0710bf5689c7bf0e7fe164a 125 SUPERFAMILY SSF54593 4 124 2.54E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DKL56_02190 3f80660f368f65597ac29b1f15937797 479 Gene3D G3DSA:3.90.1300.10 3 475 6.5E-175 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DKL56_02190 3f80660f368f65597ac29b1f15937797 479 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 468 84.765 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DKL56_02190 3f80660f368f65597ac29b1f15937797 479 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 13 466 1.8E-179 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DKL56_02190 3f80660f368f65597ac29b1f15937797 479 ProSitePatterns PS00571 Amidases signature. 144 175 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DKL56_02190 3f80660f368f65597ac29b1f15937797 479 SUPERFAMILY SSF75304 1 471 1.31E-144 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DKL56_02190 3f80660f368f65597ac29b1f15937797 479 Pfam PF01425 Amidase 29 455 4.2E-142 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 Gene3D G3DSA:3.20.110.10 2 274 6.1E-83 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 SUPERFAMILY SSF88688 284 369 7.19E-7 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 Gene3D G3DSA:2.70.98.30 477 756 7.0E-38 T 14-10-2018 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 SMART SM00872 277 355 0.0022 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 Pfam PF09261 Alpha mannosidase middle domain 278 354 2.4E-5 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 4 262 3.4E-40 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 Gene3D G3DSA:1.20.1270.50 281 379 3.5E-17 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 SUPERFAMILY SSF88713 1 263 7.26E-45 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DKL56_05910 8547cac4472541162e4b179b10d48ef6 873 SUPERFAMILY SSF74650 379 854 7.85E-20 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_06560 64f3f1af0410437e59dfaa7ededd2f75 451 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 447 1.1E-103 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_06560 64f3f1af0410437e59dfaa7ededd2f75 451 PIRSF PIRSF006351 1 451 1.0E-131 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_06560 64f3f1af0410437e59dfaa7ededd2f75 451 Pfam PF02378 Phosphotransferase system, EIIC 29 379 2.0E-53 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_06440 8a0e56880d2dab4ede749cb1a79ef5f0 290 Gene3D G3DSA:3.30.420.40 1 103 2.4E-30 T 14-10-2018 DKL56_06440 8a0e56880d2dab4ede749cb1a79ef5f0 290 SUPERFAMILY SSF53067 1 288 2.79E-37 T 14-10-2018 DKL56_06440 8a0e56880d2dab4ede749cb1a79ef5f0 290 Pfam PF00480 ROK family 4 286 8.0E-66 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DKL56_06440 8a0e56880d2dab4ede749cb1a79ef5f0 290 Gene3D G3DSA:3.30.420.40 104 290 9.5E-44 T 14-10-2018 DKL56_01290 6843afe1d24ca318f755fe8fbae50187 183 Gene3D G3DSA:3.40.630.30 4 178 1.4E-44 T 14-10-2018 DKL56_01290 6843afe1d24ca318f755fe8fbae50187 183 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 1.2E-19 T 14-10-2018 IPR000182 GNAT domain DKL56_01290 6843afe1d24ca318f755fe8fbae50187 183 SUPERFAMILY SSF55729 10 178 1.2E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 SUPERFAMILY SSF52161 6 144 4.84E-54 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 143 4.9E-58 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 Pfam PF00572 Ribosomal protein L13 15 139 1.2E-51 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 142 24.837 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 Gene3D G3DSA:3.90.1180.10 2 143 5.8E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_05990 99754d3416fe3e3bf5f186fcffc8d2aa 147 PIRSF PIRSF002181 1 146 6.7E-46 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DKL56_00900 dcb9135ee58d163fd117db401070961a 213 Pfam PF13529 Peptidase_C39 like family 28 170 1.7E-12 T 14-10-2018 IPR039564 Peptidase C39-like DKL56_00900 dcb9135ee58d163fd117db401070961a 213 Gene3D G3DSA:3.90.70.10 21 179 5.6E-15 T 14-10-2018 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 Gene3D G3DSA:3.30.230.10 82 168 6.2E-32 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 168 34.035 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 SUPERFAMILY SSF54768 14 81 8.68E-23 T 14-10-2018 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 93 163 7.1E-28 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 34 66 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 SUPERFAMILY SSF54211 86 163 1.54E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 Gene3D G3DSA:3.30.160.20 7 79 3.3E-30 T 14-10-2018 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 81 1.2E-28 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DKL56_06065 7dc14d393247bc36745d85647c3fd8d8 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 15 167 5.1E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 Pfam PF01715 IPP transferase 37 279 2.0E-72 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 SUPERFAMILY SSF52540 4 154 1.61E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 Gene3D G3DSA:3.40.50.300 5 282 6.3E-90 T 14-10-2018 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 Gene3D G3DSA:1.10.287.890 198 278 6.3E-90 T 14-10-2018 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 5 287 1.1E-83 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 4 305 26.373 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DKL56_04960 0fe4e08d207b1af27e95449adfe0cb06 306 Gene3D G3DSA:1.10.20.140 115 186 6.3E-90 T 14-10-2018 DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 Gene3D G3DSA:3.50.30.60 170 352 1.3E-49 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 Gene3D G3DSA:3.40.50.10740 8 168 5.2E-52 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 Pfam PF02016 LD-carboxypeptidase 14 342 1.8E-57 T 14-10-2018 IPR003507 Peptidase family S66 DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 SUPERFAMILY SSF52317 2 174 2.11E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 PIRSF PIRSF028757 2 357 1.2E-52 T 14-10-2018 IPR003507 Peptidase family S66 DKL56_05945 18fe5df990a59bc5fa2c84ca288c9cff 357 SUPERFAMILY SSF141986 199 347 1.1E-20 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Pfam PF03123 CAT RNA binding domain 3 51 4.6E-17 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 SUPERFAMILY SSF63520 183 280 8.5E-12 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 SMART SM01061 3 63 1.2E-18 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Pfam PF00874 PRD domain 79 162 6.8E-16 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Pfam PF00874 PRD domain 186 278 3.2E-8 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Gene3D G3DSA:1.10.1790.10 70 167 1.3E-22 T 14-10-2018 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Gene3D G3DSA:1.10.1790.10 179 283 1.7E-14 T 14-10-2018 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 SUPERFAMILY SSF50151 3 51 7.46E-14 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 SUPERFAMILY SSF63520 61 164 2.09E-21 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_07605 7b543ae47aa9b5a7b1fcb27209826fba 287 Gene3D G3DSA:2.30.24.10 1 69 6.5E-17 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 555 1.7E-153 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 SUPERFAMILY SSF52402 228 614 8.37E-67 T 14-10-2018 DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 Pfam PF00733 Asparagine synthase 238 618 1.8E-79 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 Pfam PF13537 Glutamine amidotransferase domain 47 165 2.8E-44 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 SUPERFAMILY SSF56235 1 221 1.63E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 Gene3D G3DSA:3.60.20.10 1 194 3.6E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_07150 541ede8bfd113cf8ac134df5cad40396 649 PIRSF PIRSF001589 1 639 2.2E-163 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 SUPERFAMILY SSF51395 25 335 4.4E-64 T 14-10-2018 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 PIRSF PIRSF003314 1 338 1.1E-106 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 Gene3D G3DSA:3.20.20.70 3 338 4.1E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 336 30.228 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 Pfam PF01070 FMN-dependent dehydrogenase 151 320 1.3E-15 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DKL56_04025 50110f265dcc0a127f2d8e313dbb1303 338 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 323 3.1E-93 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 DKL56_05710 7238d601c1c836a512bc6463615678c2 147 Gene3D G3DSA:1.10.1520.10 8 142 1.3E-40 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DKL56_05710 7238d601c1c836a512bc6463615678c2 147 Pfam PF00636 Ribonuclease III domain 20 116 1.2E-11 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DKL56_05710 7238d601c1c836a512bc6463615678c2 147 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 11 137 26.343 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family DKL56_05710 7238d601c1c836a512bc6463615678c2 147 SUPERFAMILY SSF69065 13 137 1.43E-38 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DKL56_05710 7238d601c1c836a512bc6463615678c2 147 PIRSF PIRSF005520 5 140 4.0E-43 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family DKL56_04610 75ee818680d899004b12d41b875394e7 115 Gene3D G3DSA:2.30.30.790 5 115 2.7E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.1E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 113 4.8E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.725 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 PIRSF PIRSF002191 1 115 3.2E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 SUPERFAMILY SSF50104 3 114 5.92E-46 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DKL56_04610 75ee818680d899004b12d41b875394e7 115 Pfam PF01245 Ribosomal protein L19 4 113 1.6E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04610 75ee818680d899004b12d41b875394e7 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_00155 35f40b934b7dc71f61416cf6fa637434 418 SUPERFAMILY SSF103473 10 413 5.89E-26 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_00155 35f40b934b7dc71f61416cf6fa637434 418 Gene3D G3DSA:1.20.1250.20 9 406 7.2E-24 T 14-10-2018 DKL56_00390 ad3b19ca6b49c5d535d9a8705dec2ccd 395 SUPERFAMILY SSF51556 59 353 5.9E-81 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_00390 ad3b19ca6b49c5d535d9a8705dec2ccd 395 Pfam PF01979 Amidohydrolase family 55 391 4.1E-37 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_00390 ad3b19ca6b49c5d535d9a8705dec2ccd 395 Gene3D G3DSA:3.20.20.140 61 355 1.8E-106 T 14-10-2018 DKL56_00390 ad3b19ca6b49c5d535d9a8705dec2ccd 395 Gene3D G3DSA:2.30.40.10 11 392 1.8E-106 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_00390 ad3b19ca6b49c5d535d9a8705dec2ccd 395 SUPERFAMILY SSF51338 1 69 2.02E-13 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_05620 deabce2909cba6b38f86f0dc5597ea33 206 Gene3D G3DSA:3.40.50.150 10 205 1.6E-41 T 14-10-2018 DKL56_05620 deabce2909cba6b38f86f0dc5597ea33 206 Pfam PF05175 Methyltransferase small domain 32 202 1.5E-46 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DKL56_05620 deabce2909cba6b38f86f0dc5597ea33 206 SUPERFAMILY SSF53335 13 202 8.52E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_07355 1de9adf362ce88734d90e50c64e3f19e 222 SUPERFAMILY SSF52317 20 200 1.53E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_07355 1de9adf362ce88734d90e50c64e3f19e 222 Gene3D G3DSA:3.40.50.880 19 214 1.7E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_07355 1de9adf362ce88734d90e50c64e3f19e 222 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 7 200 6.1E-37 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 DKL56_06885 7fc222d78b271f2503127f60c73e5e87 258 Pfam PF06738 Putative threonine/serine exporter 15 255 1.3E-65 T 14-10-2018 IPR010619 Putative threonine/serine exporter DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 105 4.8E-21 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 101 3.9E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 Gene3D G3DSA:3.90.470.20 1 117 1.9E-28 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 SUPERFAMILY SSF56214 2 116 6.02E-29 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 116 3.2E-25 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 117 20.19 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DKL56_06290 12ecfca28ea4cfc982b703225b1fb959 117 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 94 6.0E-37 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 SMART SM01387 8 88 5.2E-47 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 Pfam PF00312 Ribosomal protein S15 8 88 1.5E-34 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 SUPERFAMILY SSF47060 3 89 3.53E-33 T 14-10-2018 IPR009068 S15/NS1, RNA-binding DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-34 T 14-10-2018 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 Gene3D G3DSA:1.10.287.10 2 89 9.5E-33 T 14-10-2018 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.828 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03565 2225fc9fcac691f0794efb85db63ae08 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 8.6E-37 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_07060 fa40502982c07d9a4ebf352c5bf47e31 322 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 118 9.3E-24 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DKL56_07060 fa40502982c07d9a4ebf352c5bf47e31 322 SUPERFAMILY SSF51735 2 135 1.27E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07060 fa40502982c07d9a4ebf352c5bf47e31 322 Gene3D G3DSA:3.30.360.10 131 321 1.2E-42 T 14-10-2018 DKL56_07060 fa40502982c07d9a4ebf352c5bf47e31 322 SUPERFAMILY SSF55347 152 291 2.45E-14 T 14-10-2018 DKL56_07060 fa40502982c07d9a4ebf352c5bf47e31 322 Gene3D G3DSA:3.40.50.720 1 120 2.3E-29 T 14-10-2018 DKL56_05575 b32f9928d4a5104444738296667a8ee9 286 Gene3D G3DSA:3.40.50.300 6 165 4.7E-45 T 14-10-2018 DKL56_05575 b32f9928d4a5104444738296667a8ee9 286 Pfam PF13177 DNA polymerase III, delta subunit 11 164 7.3E-45 T 14-10-2018 DKL56_05575 b32f9928d4a5104444738296667a8ee9 286 SUPERFAMILY SSF52540 12 193 3.87E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07810 71396b886191149ce813a9ea078da6d9 436 Pfam PF00860 Permease family 20 394 1.3E-45 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DKL56_07810 71396b886191149ce813a9ea078da6d9 436 PIRSF PIRSF005353 1 436 2.4E-161 T 14-10-2018 IPR026033 Purine permease PbuG-like DKL56_00180 bf944113e5ca1e601bb5de503eebd591 204 Gene3D G3DSA:3.40.50.880 1 202 7.6E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_00180 bf944113e5ca1e601bb5de503eebd591 204 Pfam PF03575 Peptidase family S51 9 203 7.6E-46 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 DKL56_00180 bf944113e5ca1e601bb5de503eebd591 204 SUPERFAMILY SSF52317 1 194 2.23E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_04635 dd1d6be7b37b20aee9cb8662c3d97a50 113 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 7 99 6.7E-26 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DKL56_04635 dd1d6be7b37b20aee9cb8662c3d97a50 113 Hamap MF_00245 UPF0122 protein . 4 107 17.026 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DKL56_04635 dd1d6be7b37b20aee9cb8662c3d97a50 113 SUPERFAMILY SSF88659 6 107 1.5E-25 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DKL56_04635 dd1d6be7b37b20aee9cb8662c3d97a50 113 Gene3D G3DSA:1.10.10.10 1 109 1.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01120 83cbe3f02d52b593eecdc15daf012366 274 Gene3D G3DSA:1.25.40.10 1 272 3.8E-22 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_01120 83cbe3f02d52b593eecdc15daf012366 274 SUPERFAMILY SSF47413 3 62 1.3E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_01120 83cbe3f02d52b593eecdc15daf012366 274 SUPERFAMILY SSF48452 171 258 3.5E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_01120 83cbe3f02d52b593eecdc15daf012366 274 Pfam PF01381 Helix-turn-helix 8 57 1.4E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_01120 83cbe3f02d52b593eecdc15daf012366 274 SMART SM00530 7 61 3.3E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 231 364 2.5E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Gene3D G3DSA:1.20.58.760 441 640 6.2E-64 T 14-10-2018 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Gene3D G3DSA:3.40.50.300 182 366 3.1E-70 T 14-10-2018 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Pfam PF01434 Peptidase family M41 426 629 8.2E-72 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 ProSitePatterns PS00674 AAA-protein family signature. 335 353 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Pfam PF06480 FtsH Extracellular 13 128 6.3E-11 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 SUPERFAMILY SSF52540 188 435 2.23E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 647 36.002 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 138 629 5.4E-219 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 SMART SM00382 227 367 3.8E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 Gene3D G3DSA:1.10.8.60 367 440 5.3E-31 T 14-10-2018 DKL56_06245 679d6fbb8d7f0fda838c9d05b63f5710 735 SUPERFAMILY SSF140990 447 635 4.19E-62 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 Gene3D G3DSA:3.90.770.10 21 346 9.6E-108 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 SUPERFAMILY SSF56542 1 401 4.71E-87 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 36 57 2.4E-10 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 63 83 2.4E-10 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 286 307 2.4E-10 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 153 171 2.4E-10 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 Gene3D G3DSA:1.10.8.660 350 401 1.2E-10 T 14-10-2018 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 9 360 1.2E-83 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 SUPERFAMILY SSF55035 98 199 2.04E-21 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 30 359 1.1E-83 T 14-10-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 DKL56_02390 be6f10b5c0631e766f9d53b1fd1e5d35 403 Gene3D G3DSA:3.30.70.420 96 200 9.6E-108 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 597 609 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 478 487 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 367 381 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 613 629 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 317 333 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 381 401 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 11 21 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR01159 DNA gyrase subunit B signature 226 248 1.7E-51 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Gene3D G3DSA:3.30.565.10 20 229 4.6E-82 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Gene3D G3DSA:3.40.50.670 414 646 1.3E-98 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 SUPERFAMILY SSF55874 11 218 6.31E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 SUPERFAMILY SSF56719 403 637 2.88E-82 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Pfam PF00204 DNA gyrase B 227 397 1.3E-52 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 573 633 5.6E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 9 642 46.368 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 180 6.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 40 55 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 532 544 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 75 88 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 273 286 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 576 592 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 494 510 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 512 529 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 428 442 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 PRINTS PR00418 DNA topoisomerase II family signature 117 131 4.6E-63 T 14-10-2018 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Pfam PF01751 Toprim domain 427 530 1.5E-17 T 14-10-2018 IPR006171 TOPRIM domain DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 SMART SM00387 36 181 2.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 SMART SM00433 40 637 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 Gene3D G3DSA:3.30.230.10 230 407 1.7E-64 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 8 645 0.0 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 SUPERFAMILY SSF54211 227 397 2.09E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_03860 5a9f5daeb29caf02778cd6d883098ae6 652 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Gene3D G3DSA:3.30.70.270 18 183 3.1E-50 T 14-10-2018 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Gene3D G3DSA:2.30.40.20 35 92 3.1E-50 T 14-10-2018 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Pfam PF11799 impB/mucB/samB family C-terminal domain 260 365 2.4E-19 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 SUPERFAMILY SSF100879 261 361 9.26E-20 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Gene3D G3DSA:3.30.1490.100 261 370 1.7E-21 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 SUPERFAMILY SSF56672 8 252 3.91E-76 T 14-10-2018 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Pfam PF11798 IMS family HHH motif 185 216 3.2E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Hamap MF_01113 DNA polymerase IV [dinB]. 15 375 32.944 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Gene3D G3DSA:1.10.150.20 185 246 8.7E-13 T 14-10-2018 DKL56_05460 0b3ce84b64c20ed29efb89fb9c393920 378 Pfam PF00817 impB/mucB/samB family 21 173 3.5E-42 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 Pfam PF02033 Ribosome-binding factor A 4 108 6.5E-29 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 SUPERFAMILY SSF89919 3 111 1.05E-30 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 108 25.173 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 95 1.0E-33 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 Gene3D G3DSA:3.30.300.20 1 117 3.1E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DKL56_04470 66ab76f5faf83970a81fba53f4da5e97 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 113 3.4E-28 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DKL56_01510 04dc601e1ca3f74b0bcd652f40854bed 171 SUPERFAMILY SSF55729 1 157 6.49E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_01510 04dc601e1ca3f74b0bcd652f40854bed 171 Pfam PF00583 Acetyltransferase (GNAT) family 35 148 3.1E-6 T 14-10-2018 IPR000182 GNAT domain DKL56_01510 04dc601e1ca3f74b0bcd652f40854bed 171 Gene3D G3DSA:3.40.630.30 2 170 5.6E-46 T 14-10-2018 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 SUPERFAMILY SSF54364 3 74 1.31E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 166 1.4E-65 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 Gene3D G3DSA:3.30.110.10 75 169 6.4E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 SUPERFAMILY SSF55200 79 168 1.57E-29 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 Gene3D G3DSA:3.10.20.80 1 74 4.0E-32 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 71 5.6E-32 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 167 26.927 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DKL56_05090 9c15bdaa36566297caaaddc4cc89bd22 169 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 165 2.6E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 Pfam PF00270 DEAD/DEAH box helicase 25 189 1.7E-50 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 Gene3D G3DSA:3.40.50.300 1 206 7.7E-76 T 14-10-2018 DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 Pfam PF00271 Helicase conserved C-terminal domain 226 335 3.1E-32 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 SMART SM00490 254 335 2.4E-35 T 14-10-2018 IPR001650 Helicase, C-terminal DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 Gene3D G3DSA:3.40.50.300 211 435 2.5E-55 T 14-10-2018 DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 SUPERFAMILY SSF52540 70 357 3.9E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 SMART SM00487 20 218 2.6E-66 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DKL56_06295 12112245db56f83b6d808d0b256cff7b 510 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 SMART SM00079 38 259 9.5E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 5.6E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 SMART SM00062 38 260 3.8E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 Gene3D G3DSA:3.40.190.10 126 222 1.3E-75 T 14-10-2018 DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 Gene3D G3DSA:3.40.190.10 39 257 1.3E-75 T 14-10-2018 DKL56_02055 f0d5f6a1253b7804ad150104c43a59d2 271 SUPERFAMILY SSF53850 1 259 1.2E-68 T 14-10-2018 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 350 363 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 SMART SM00382 346 526 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 Pfam PF00664 ABC transporter transmembrane region 15 278 3.5E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 SUPERFAMILY SSF90123 4 465 9.03E-33 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 Gene3D G3DSA:3.40.50.300 296 526 3.7E-43 T 14-10-2018 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 SUPERFAMILY SSF52540 316 525 3.77E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 Pfam PF00005 ABC transporter 341 481 8.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00505 ea887bbb59fbd9c738359e6d924599ec 526 Gene3D G3DSA:1.20.1560.10 2 295 4.2E-20 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 Pfam PF00162 Phosphoglycerate kinase 6 392 4.3E-157 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 145 167 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 180 202 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 203 222 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 321 346 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 355 366 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PRINTS PR00477 Phosphoglycerate kinase family signature 378 395 1.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 SUPERFAMILY SSF53748 1 402 1.3E-150 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 PIRSF PIRSF000724 1 403 3.6E-144 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 Gene3D G3DSA:3.40.50.1260 1 183 8.0E-69 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 Gene3D G3DSA:3.40.50.1260 195 401 5.0E-84 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02740 227053bf99b8e96c5d793f91993a9bcf 403 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 402 41.39 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_01950 b8aaad539036625ad9f830a4d3977403 111 Gene3D G3DSA:3.40.50.2300 5 111 3.8E-33 T 14-10-2018 DKL56_01950 b8aaad539036625ad9f830a4d3977403 111 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 104 2.0E-22 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_01950 b8aaad539036625ad9f830a4d3977403 111 SUPERFAMILY SSF52794 4 110 2.62E-33 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_02410 080beadcebe43adcec2cfc14120365ee 318 Gene3D G3DSA:3.40.50.1820 65 318 3.9E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_02410 080beadcebe43adcec2cfc14120365ee 318 SUPERFAMILY SSF53474 10 318 3.63E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_02410 080beadcebe43adcec2cfc14120365ee 318 Pfam PF12146 Serine aminopeptidase, S33 93 196 2.1E-7 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 Gene3D G3DSA:3.40.50.720 96 286 1.2E-104 T 14-10-2018 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 317 9.3E-23 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 285 6.0E-63 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 SUPERFAMILY SSF52283 3 130 5.48E-30 T 14-10-2018 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 SUPERFAMILY SSF51735 101 285 4.49E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_00110 87d4283410678c04fd2d88987c2d2f5e 318 Gene3D G3DSA:3.40.50.720 5 309 1.2E-104 T 14-10-2018 DKL56_01555 38547489818ac9c83491040e3ded9d34 366 Gene3D G3DSA:3.40.50.2000 13 356 8.0E-59 T 14-10-2018 DKL56_01555 38547489818ac9c83491040e3ded9d34 366 Pfam PF00534 Glycosyl transferases group 1 189 337 2.6E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_01555 38547489818ac9c83491040e3ded9d34 366 Gene3D G3DSA:3.40.50.2000 170 346 8.0E-59 T 14-10-2018 DKL56_01555 38547489818ac9c83491040e3ded9d34 366 SUPERFAMILY SSF53756 3 363 3.35E-68 T 14-10-2018 DKL56_01555 38547489818ac9c83491040e3ded9d34 366 Pfam PF13439 Glycosyltransferase Family 4 13 169 1.8E-19 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DKL56_06795 211a7ee44b6c8040b0defcf79314f9e0 246 SMART SM01007 7 197 1.9E-62 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DKL56_06795 211a7ee44b6c8040b0defcf79314f9e0 246 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 7.6E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DKL56_06795 211a7ee44b6c8040b0defcf79314f9e0 246 SUPERFAMILY SSF53639 1 222 2.55E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DKL56_06795 211a7ee44b6c8040b0defcf79314f9e0 246 Gene3D G3DSA:3.40.225.10 1 230 6.2E-60 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DKL56_05685 035b062d523c9f23c0d9cd57fc21644b 56 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 55 3.1E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DKL56_05685 035b062d523c9f23c0d9cd57fc21644b 56 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 2 54 2.1E-15 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_05685 035b062d523c9f23c0d9cd57fc21644b 56 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 55 10.261 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_05685 035b062d523c9f23c0d9cd57fc21644b 56 Gene3D G3DSA:1.20.5.1030 1 55 9.2E-16 T 14-10-2018 IPR038379 SecE superfamily DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 PIRSF PIRSF003078 3 222 5.8E-57 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 5.6E-56 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 218 4.7E-53 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 216 28.097 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 SUPERFAMILY SSF53335 1 239 4.14E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_00910 b2bd53e0382961dd20617c1fd6992158 240 Gene3D G3DSA:3.40.50.150 1 240 1.4E-83 T 14-10-2018 DKL56_07200 054b2765923c643b494331ffe54a59f1 266 Gene3D G3DSA:3.90.190.10 10 266 6.6E-65 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_07200 054b2765923c643b494331ffe54a59f1 266 Pfam PF13350 Tyrosine phosphatase family 11 265 1.4E-67 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DKL56_07200 054b2765923c643b494331ffe54a59f1 266 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 155 165 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 DKL56_07200 054b2765923c643b494331ffe54a59f1 266 SUPERFAMILY SSF52799 10 265 1.45E-56 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 Pfam PF00814 Glycoprotease family 31 316 5.2E-93 T 14-10-2018 IPR000905 Gcp-like domain DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 SUPERFAMILY SSF53067 9 129 5.18E-28 T 14-10-2018 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 1.2E-43 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 SUPERFAMILY SSF53067 107 317 1.36E-39 T 14-10-2018 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 Gene3D G3DSA:3.30.420.40 9 325 1.9E-111 T 14-10-2018 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 323 9.7E-124 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 341 56.383 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 Gene3D G3DSA:3.30.420.40 134 303 1.9E-111 T 14-10-2018 DKL56_05540 69a4ec3e37160e7c6bcee307afabb5fd 349 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 316 1.5E-101 T 14-10-2018 IPR017861 Kae1/TsaD family DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Pfam PF02650 WhiA C-terminal HTH domain 222 306 4.8E-34 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Pfam PF14527 WhiA LAGLIDADG-like domain 126 219 9.5E-36 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Gene3D G3DSA:3.10.28.10 1 217 1.4E-60 T 14-10-2018 IPR027434 Homing endonuclease DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 4 309 32.511 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 104 7.7E-30 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain DKL56_02680 4d54fecce449ace256a957bda7c64476 311 SUPERFAMILY SSF55608 114 223 7.65E-17 T 14-10-2018 IPR027434 Homing endonuclease DKL56_02680 4d54fecce449ace256a957bda7c64476 311 Gene3D G3DSA:1.10.10.10 218 311 3.1E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02680 4d54fecce449ace256a957bda7c64476 311 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 5 307 1.8E-123 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like DKL56_00930 4ef6a1d8836ca8cd6346adf079ea1836 91 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 60 2.1E-28 T 14-10-2018 IPR009296 Protein of unknown function DUF951 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Gene3D G3DSA:1.20.1580.10 97 385 3.0E-131 T 14-10-2018 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 SUPERFAMILY SSF52540 515 811 1.87E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Gene3D G3DSA:3.40.50.300 520 834 9.2E-112 T 14-10-2018 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Gene3D G3DSA:3.40.50.300 12 484 3.0E-131 T 14-10-2018 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 SUPERFAMILY SSF52540 13 467 7.2E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Gene3D G3DSA:1.20.1580.10 626 665 9.2E-112 T 14-10-2018 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 677 794 1.9E-8 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_07655 fa4df8a54e4ccd833ca07451ea346c9c 843 Gene3D G3DSA:1.10.8.280 187 300 3.0E-131 T 14-10-2018 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Gene3D G3DSA:3.40.930.10 547 696 1.3E-30 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Gene3D G3DSA:1.10.10.10 6 73 7.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Gene3D G3DSA:1.10.10.10 81 157 1.6E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 SUPERFAMILY SSF63520 294 388 1.44E-15 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 554 696 1.3E-17 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Pfam PF00874 PRD domain 299 387 5.6E-13 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Pfam PF08279 HTH domain 99 150 2.3E-8 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 SUPERFAMILY SSF52794 409 486 9.94E-8 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 SUPERFAMILY SSF55804 550 697 1.62E-19 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Gene3D G3DSA:1.10.1790.10 292 389 6.5E-11 T 14-10-2018 DKL56_06775 cdbd77f591318fb60a3ab9b100f3f3fb 699 Gene3D G3DSA:3.40.50.2300 408 497 1.4E-12 T 14-10-2018 DKL56_04195 cfaf0bbd11f62696d36c407748c526aa 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 326 4.0E-64 T 14-10-2018 IPR016040 NAD(P)-binding domain DKL56_04195 cfaf0bbd11f62696d36c407748c526aa 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 5 336 1.2E-129 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DKL56_04195 cfaf0bbd11f62696d36c407748c526aa 340 Gene3D G3DSA:3.40.50.720 6 275 4.0E-141 T 14-10-2018 DKL56_04195 cfaf0bbd11f62696d36c407748c526aa 340 Gene3D G3DSA:3.90.25.10 194 330 4.0E-141 T 14-10-2018 DKL56_04195 cfaf0bbd11f62696d36c407748c526aa 340 SUPERFAMILY SSF51735 5 338 1.05E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 25.28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 SUPERFAMILY SSF50129 2 93 5.75E-33 T 14-10-2018 IPR011032 GroES-like superfamily DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 Gene3D G3DSA:2.30.33.40 1 94 1.7E-35 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 PRINTS PR00297 10kDa chaperonin signature 80 93 4.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 PRINTS PR00297 10kDa chaperonin signature 59 71 4.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 PRINTS PR00297 10kDa chaperonin signature 24 45 4.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 PRINTS PR00297 10kDa chaperonin signature 2 17 4.6E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 SMART SM00883 1 93 6.4E-49 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_05515 4f9312a2e3dd38e262ceb048e64b822c 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 2.6E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Gene3D G3DSA:3.40.50.620 203 396 7.0E-80 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Pfam PF02540 NAD synthase 217 286 2.1E-8 T 14-10-2018 IPR022310 NAD/GMP synthase DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Gene3D G3DSA:3.30.300.10 397 516 3.9E-51 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 SUPERFAMILY SSF52317 11 231 6.0E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 8 516 54.704 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Pfam PF00958 GMP synthase C terminal domain 424 515 1.3E-43 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 52 66 6.6E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 11 25 6.6E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 82 98 6.6E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 SUPERFAMILY SSF52402 187 438 2.3E-60 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 11 198 3.0E-77 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 1.3E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 82 93 1.3E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 PRINTS PR00096 Glutamine amidotransferase superfamily signature 55 64 1.3E-5 T 14-10-2018 DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Pfam PF00117 Glutamine amidotransferase class-I 13 194 1.9E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 Gene3D G3DSA:3.40.50.880 5 199 1.3E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_06410 dbabaa7b7dfa7ef95d46e7ba89efcfc1 516 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 206 516 1.6E-155 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DKL56_01575 b5b8ed599137716127545ed4dcae2d21 85 PIRSF PIRSF037258 1 85 3.0E-46 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DKL56_01575 b5b8ed599137716127545ed4dcae2d21 85 Hamap MF_01507 UPF0297 protein . 1 84 28.0 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DKL56_01575 b5b8ed599137716127545ed4dcae2d21 85 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 81 2.4E-38 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 SUPERFAMILY SSF53681 5 107 3.01E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 SUPERFAMILY SSF53681 109 252 8.34E-31 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 Gene3D G3DSA:3.40.50.1860 6 252 5.0E-85 T 14-10-2018 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 Hamap MF_00258 Glutamate racemase [murI]. 4 255 33.187 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 Gene3D G3DSA:3.40.50.1860 95 206 5.0E-85 T 14-10-2018 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 248 8.9E-68 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_01610 736432989e0e5bb38c02b9be5234e9e7 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 214 3.2E-36 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DKL56_03320 a85fa0256a006798ef6657dd06b789ad 207 Gene3D G3DSA:3.40.140.10 83 207 6.7E-40 T 14-10-2018 DKL56_03320 a85fa0256a006798ef6657dd06b789ad 207 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 156 161 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DKL56_03320 a85fa0256a006798ef6657dd06b789ad 207 Pfam PF04002 RadC-like JAB domain 87 205 1.4E-38 T 14-10-2018 IPR025657 RadC-like JAB domain DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 Gene3D G3DSA:4.10.910.10 72 115 2.6E-24 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 115 26.711 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 SUPERFAMILY SSF46946 2 114 3.87E-45 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 PIRSF PIRSF002134 1 115 3.1E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 Gene3D G3DSA:1.10.8.50 1 71 7.1E-29 T 14-10-2018 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.0E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06030 90a52ae7531efbbd01505ffb2e286f18 115 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.2E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_07440 2b86b63b6bb3554811ddc053d5f53723 418 Gene3D G3DSA:1.20.1250.20 11 209 1.4E-12 T 14-10-2018 DKL56_07440 2b86b63b6bb3554811ddc053d5f53723 418 SUPERFAMILY SSF103473 14 412 9.55E-35 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07440 2b86b63b6bb3554811ddc053d5f53723 418 Gene3D G3DSA:1.20.1250.20 223 417 5.4E-11 T 14-10-2018 DKL56_07440 2b86b63b6bb3554811ddc053d5f53723 418 Pfam PF07690 Major Facilitator Superfamily 34 274 1.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 235 35.635 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 SMART SM00934 4 230 1.8E-76 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 231 4.3E-55 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 Gene3D G3DSA:3.20.20.70 1 235 4.7E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 SUPERFAMILY SSF51366 3 233 6.1E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04935 b0f4ec7ec1f91e0d3ba5f8d9edb5ba5b 235 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 229 5.4E-40 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_05625 2b551ecc4860137541d116985ce6174b 309 Pfam PF03217 SLAP domain 51 100 1.2E-9 T 14-10-2018 IPR024968 SLAP domain DKL56_05625 2b551ecc4860137541d116985ce6174b 309 SUPERFAMILY SSF55797 159 302 9.42E-7 T 14-10-2018 IPR035940 CAP superfamily DKL56_05625 2b551ecc4860137541d116985ce6174b 309 Gene3D G3DSA:3.40.33.10 29 304 8.9E-19 T 14-10-2018 IPR035940 CAP superfamily DKL56_05785 0974499a87ac839bd54d6f597ca09978 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 188 5.1E-10 T 14-10-2018 DKL56_05785 0974499a87ac839bd54d6f597ca09978 218 SUPERFAMILY SSF56784 4 215 2.56E-18 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_05785 0974499a87ac839bd54d6f597ca09978 218 Gene3D G3DSA:1.10.150.240 17 89 8.9E-20 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKL56_05785 0974499a87ac839bd54d6f597ca09978 218 Gene3D G3DSA:3.40.50.1000 14 211 8.9E-20 T 14-10-2018 IPR023214 HAD superfamily DKL56_04330 0d7c4b5aed57bee208cee508f63c2649 103 SUPERFAMILY SSF89082 13 100 4.97E-14 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DKL56_04330 0d7c4b5aed57bee208cee508f63c2649 103 Gene3D G3DSA:1.10.490.50 13 103 2.4E-9 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DKL56_04330 0d7c4b5aed57bee208cee508f63c2649 103 Pfam PF07739 TipAS antibiotic-recognition domain 2 99 7.1E-16 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain DKL56_02645 4239744c44ad072c27525ad62b002b85 309 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 5 303 4.4E-112 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.6E-36 T 14-10-2018 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.6E-36 T 14-10-2018 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 1.6E-36 T 14-10-2018 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 1.6E-36 T 14-10-2018 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.6E-36 T 14-10-2018 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 SUPERFAMILY SSF51905 1 303 6.74E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 7.7E-66 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 Gene3D G3DSA:3.50.50.60 120 243 3.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_02645 4239744c44ad072c27525ad62b002b85 309 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 1.6E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DKL56_02645 4239744c44ad072c27525ad62b002b85 309 Gene3D G3DSA:3.50.50.60 7 302 3.9E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 Gene3D G3DSA:3.40.50.300 308 523 2.1E-43 T 14-10-2018 DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 Gene3D G3DSA:1.20.1560.10 2 307 7.7E-30 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 SUPERFAMILY SSF90123 7 296 1.96E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 SUPERFAMILY SSF52540 327 508 1.57E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 ProSitePatterns PS00211 ABC transporters family signature. 449 463 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 SMART SM00382 343 508 8.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 Pfam PF00005 ABC transporter 336 474 2.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00320 3afc7e5d7428b5cc5074af574bf46365 525 Pfam PF00664 ABC transporter transmembrane region 14 276 5.7E-18 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_03690 eda069e60b63c00435a6d0262ba93cb9 228 PIRSF PIRSF037778 4 225 4.5E-32 T 14-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 DKL56_03690 eda069e60b63c00435a6d0262ba93cb9 228 Pfam PF12822 ECF transporter, substrate-specific component 15 208 1.9E-14 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DKL56_03690 eda069e60b63c00435a6d0262ba93cb9 228 Gene3D G3DSA:1.10.1760.20 2 218 4.3E-39 T 14-10-2018 DKL56_05615 b27f5b6d5824278323aba54255866c01 172 Pfam PF14437 MafB19-like deaminase 7 154 2.5E-40 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DKL56_05615 b27f5b6d5824278323aba54255866c01 172 Gene3D G3DSA:3.40.140.10 1 172 4.2E-62 T 14-10-2018 DKL56_05615 b27f5b6d5824278323aba54255866c01 172 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 58 95 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DKL56_05615 b27f5b6d5824278323aba54255866c01 172 SUPERFAMILY SSF53927 7 157 1.52E-54 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DKL56_05615 b27f5b6d5824278323aba54255866c01 172 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 154 46.303 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DKL56_02675 e0ed17b8538ea049877706f953fec983 344 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 19 330 2.8E-109 T 14-10-2018 IPR010119 Gluconeogenesis factor DKL56_02675 e0ed17b8538ea049877706f953fec983 344 SUPERFAMILY SSF142338 16 330 6.15E-98 T 14-10-2018 DKL56_02675 e0ed17b8538ea049877706f953fec983 344 Hamap MF_00973 Gluconeogenesis factor. 15 335 33.181 T 14-10-2018 IPR010119 Gluconeogenesis factor DKL56_02675 e0ed17b8538ea049877706f953fec983 344 Gene3D G3DSA:3.40.50.12300 13 336 1.3E-117 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily DKL56_02675 e0ed17b8538ea049877706f953fec983 344 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 19 33 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DKL56_02675 e0ed17b8538ea049877706f953fec983 344 Pfam PF01933 Uncharacterised protein family UPF0052 19 310 1.3E-95 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 Gene3D G3DSA:3.30.590.10 110 445 6.0E-134 T 14-10-2018 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 Gene3D G3DSA:3.10.20.70 3 109 7.5E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 8.4E-132 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 236 251 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 SMART SM01230 107 356 3.9E-127 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 SUPERFAMILY SSF54368 6 106 4.19E-29 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 SUPERFAMILY SSF55931 107 444 2.16E-117 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 100 4.0E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DKL56_04950 0ea2ea40896fffa755b2917596689b2c 445 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 443 6.8E-159 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DKL56_06820 8941555cf032f2847a7cb6408dfedd8e 182 Gene3D G3DSA:3.30.63.10 32 87 1.4E-34 T 14-10-2018 DKL56_06820 8941555cf032f2847a7cb6408dfedd8e 182 SMART SM00072 1 180 1.3E-5 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DKL56_06820 8941555cf032f2847a7cb6408dfedd8e 182 SUPERFAMILY SSF52540 3 180 1.43E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06820 8941555cf032f2847a7cb6408dfedd8e 182 Pfam PF00625 Guanylate kinase 2 177 2.0E-20 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DKL56_06820 8941555cf032f2847a7cb6408dfedd8e 182 Gene3D G3DSA:3.40.50.300 5 175 1.4E-34 T 14-10-2018 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Gene3D G3DSA:3.40.50.970 2 257 4.8E-67 T 14-10-2018 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 SUPERFAMILY SSF52518 284 442 4.95E-34 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 SMART SM00861 284 447 5.9E-22 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Pfam PF02780 Transketolase, C-terminal domain 464 567 1.7E-11 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Gene3D G3DSA:3.40.50.970 285 454 6.0E-36 T 14-10-2018 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 SUPERFAMILY SSF52518 8 313 8.3E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 9 201 6.2E-71 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 205 248 1.9E-5 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 SUPERFAMILY SSF52922 464 580 2.09E-16 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Gene3D G3DSA:3.40.50.920 461 581 4.4E-22 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 Pfam PF02779 Transketolase, pyrimidine binding domain 293 439 1.1E-17 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DKL56_00265 b78bd93332adaa3f5b65a9fdc3c1ddbf 581 ProSitePatterns PS00801 Transketolase signature 1. 34 53 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DKL56_00405 46279932cc759d9e2e7aad589b1f225d 315 Gene3D G3DSA:3.90.550.10 4 271 1.3E-63 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_00405 46279932cc759d9e2e7aad589b1f225d 315 Pfam PF01501 Glycosyl transferase family 8 5 246 1.3E-42 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DKL56_00405 46279932cc759d9e2e7aad589b1f225d 315 SUPERFAMILY SSF53448 3 264 1.49E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_04275 7ce3ab00de6a990e708641b7570f8a58 317 SUPERFAMILY SSF56235 2 280 9.91E-80 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_04275 7ce3ab00de6a990e708641b7570f8a58 317 Gene3D G3DSA:3.60.20.30 151 291 6.0E-45 T 14-10-2018 DKL56_04275 7ce3ab00de6a990e708641b7570f8a58 317 Pfam PF01112 Asparaginase 17 281 3.5E-69 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 DKL56_03735 e1d5d235f7372dd0691b168011ae90c8 239 Pfam PF01026 TatD related DNase 3 234 3.3E-35 T 14-10-2018 IPR001130 TatD family GO:0016788 DKL56_03735 e1d5d235f7372dd0691b168011ae90c8 239 PIRSF PIRSF005902 1 239 2.7E-37 T 14-10-2018 IPR001130 TatD family GO:0016788 DKL56_03735 e1d5d235f7372dd0691b168011ae90c8 239 Gene3D G3DSA:3.20.20.140 1 239 4.1E-43 T 14-10-2018 DKL56_03735 e1d5d235f7372dd0691b168011ae90c8 239 SUPERFAMILY SSF51556 2 236 3.57E-41 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 SUPERFAMILY SSF64288 55 238 1.18E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 Gene3D G3DSA:1.10.10.10 5 86 2.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 2.3E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 SMART SM00345 9 67 4.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 Gene3D G3DSA:3.40.1410.10 87 237 1.6E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 SMART SM00866 93 232 2.3E-30 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.8E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 SUPERFAMILY SSF46785 5 71 5.8E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02005 5c66e9ecc69abb6a939c80de3ae12688 241 Pfam PF07702 UTRA domain 95 230 6.4E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_03835 d28799bdbe7e3c4165fc6baad82b121d 174 Gene3D G3DSA:3.60.20.10 1 174 2.3E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_03835 d28799bdbe7e3c4165fc6baad82b121d 174 SUPERFAMILY SSF56235 1 171 2.65E-49 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_03835 d28799bdbe7e3c4165fc6baad82b121d 174 Pfam PF00227 Proteasome subunit 2 170 5.8E-20 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DKL56_03835 d28799bdbe7e3c4165fc6baad82b121d 174 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 174 4.2E-71 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 SUPERFAMILY SSF57716 148 196 2.71E-18 T 14-10-2018 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 Gene3D G3DSA:3.40.50.300 1 147 3.5E-29 T 14-10-2018 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 Gene3D G3DSA:3.30.60.20 149 199 2.0E-13 T 14-10-2018 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 Pfam PF00265 Thymidine kinase 3 192 4.8E-47 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 Hamap MF_00124 Thymidine kinase [tdk]. 1 195 34.409 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 SUPERFAMILY SSF52540 1 148 1.06E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 PIRSF PIRSF035805 1 199 4.0E-60 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DKL56_03170 8a2d05baab26def873895fbe9ac4ab85 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 179 192 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF56059 683 926 1.34E-44 T 14-10-2018 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF56059 158 404 5.02E-49 T 14-10-2018 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SMART SM00851 949 1036 1.2E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF52440 1 123 1.11E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 430 546 9.6E-16 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF48108 421 553 5.49E-22 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:3.40.50.1380 931 1056 3.4E-30 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF52335 929 1051 2.75E-27 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 157 339 7.0E-20 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:3.40.50.20 1 116 2.4E-29 T 14-10-2018 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:1.10.1030.10 408 552 1.2E-15 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:3.30.470.20 667 928 1.6E-41 T 14-10-2018 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:3.40.50.20 554 662 1.6E-25 T 14-10-2018 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SMART SM01096 426 546 6.4E-15 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 SUPERFAMILY SSF52440 558 664 4.03E-24 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 208 227 3.8E-20 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 383 401 3.8E-20 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 302 331 3.8E-20 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.8E-20 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 243 260 3.8E-20 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Pfam PF02142 MGS-like domain 950 1035 1.7E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DKL56_03910 2929fbb69a6b4f56f9556a2719fba6b6 1058 Gene3D G3DSA:3.30.470.20 191 405 8.3E-46 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 Gene3D G3DSA:1.10.3370.10 1 426 1.6E-141 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PIRSF PIRSF004557 1 430 3.6E-118 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 266 285 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.7E-88 T 14-10-2018 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 26.521 T 14-10-2018 IPR026593 Protein translocase subunit SecY DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 Pfam PF00344 SecY translocase 68 413 2.9E-99 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 2.5E-131 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_06050 6276d1a0d54ae3c2108e0285dfd9a425 431 SUPERFAMILY SSF103491 1 421 3.53E-117 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 Gene3D G3DSA:1.20.58.340 122 247 3.6E-12 T 14-10-2018 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 Pfam PF01544 CorA-like Mg2+ transporter protein 11 299 1.8E-57 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 Gene3D G3DSA:3.30.460.20 4 118 2.2E-9 T 14-10-2018 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 SUPERFAMILY SSF144083 241 302 9.02E-14 T 14-10-2018 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 Gene3D G3DSA:1.20.58.340 249 305 6.0E-7 T 14-10-2018 DKL56_01170 99f4bcfcfc90a8f8cdab9081f12b4e0f 305 SUPERFAMILY SSF143865 10 240 4.84E-28 T 14-10-2018 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 Gene3D G3DSA:3.40.50.720 79 208 7.9E-47 T 14-10-2018 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 1 209 40.638 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 SMART SM00881 79 180 9.1E-20 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 Gene3D G3DSA:1.10.10.10 1 78 1.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 Pfam PF02629 CoA binding domain 83 178 1.2E-28 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 Pfam PF06971 Putative DNA-binding protein N-terminus 5 53 1.5E-19 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 SUPERFAMILY SSF51735 83 206 4.33E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_05520 14a8f5a5cb597c695a597b2e65857d60 213 SUPERFAMILY SSF46785 7 78 2.4E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02375 1ec78fd4a67c5a72b667dfe869187896 307 PIRSF PIRSF035875 2 288 6.2E-50 T 14-10-2018 IPR017039 Virulence factor BrkB DKL56_02375 1ec78fd4a67c5a72b667dfe869187896 307 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 15 279 3.4E-25 T 14-10-2018 IPR017039 Virulence factor BrkB DKL56_02375 1ec78fd4a67c5a72b667dfe869187896 307 Pfam PF03631 Virulence factor BrkB 27 280 2.0E-47 T 14-10-2018 IPR017039 Virulence factor BrkB DKL56_03895 9fbcd0837adf2cb4760e1ee5c647d808 291 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 282 1.2E-90 T 14-10-2018 IPR003797 DegV DKL56_03895 9fbcd0837adf2cb4760e1ee5c647d808 291 Gene3D G3DSA:3.40.50.10170 1 153 2.1E-48 T 14-10-2018 DKL56_03895 9fbcd0837adf2cb4760e1ee5c647d808 291 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 282 6.3E-78 T 14-10-2018 IPR003797 DegV DKL56_03895 9fbcd0837adf2cb4760e1ee5c647d808 291 SUPERFAMILY SSF82549 1 284 7.06E-87 T 14-10-2018 DKL56_03895 9fbcd0837adf2cb4760e1ee5c647d808 291 Gene3D G3DSA:3.30.1180.10 154 285 8.2E-35 T 14-10-2018 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 Pfam PF02378 Phosphotransferase system, EIIC 140 420 6.4E-28 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 Gene3D G3DSA:2.70.70.10 496 655 1.7E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_06540 393161c88821f953a01f38d9429b91d6 657 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 Gene3D G3DSA:3.30.1360.60 2 79 3.3E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 509 630 4.6E-40 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 508 633 6.0E-44 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 SUPERFAMILY SSF51261 506 654 1.28E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_06540 393161c88821f953a01f38d9429b91d6 657 SUPERFAMILY SSF55604 10 74 3.4E-15 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_06540 393161c88821f953a01f38d9429b91d6 657 Pfam PF00367 phosphotransferase system, EIIB 11 44 1.1E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_00660 5cd6ebbca723a3e0edb36ba967fd83fd 218 SUPERFAMILY SSF53474 5 217 8.67E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00660 5cd6ebbca723a3e0edb36ba967fd83fd 218 Gene3D G3DSA:3.40.50.1820 4 216 1.4E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00660 5cd6ebbca723a3e0edb36ba967fd83fd 218 Pfam PF12146 Serine aminopeptidase, S33 21 137 1.3E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DKL56_04755 22f9127603c6ac8f1d1bd7c455ad0ce0 249 Gene3D G3DSA:3.60.40.10 1 244 1.1E-69 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DKL56_04755 22f9127603c6ac8f1d1bd7c455ad0ce0 249 SMART SM00332 1 241 3.4E-18 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DKL56_04755 22f9127603c6ac8f1d1bd7c455ad0ce0 249 Pfam PF13672 Protein phosphatase 2C 14 204 1.7E-17 T 14-10-2018 DKL56_04755 22f9127603c6ac8f1d1bd7c455ad0ce0 249 SMART SM00331 8 243 6.6E-35 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DKL56_04755 22f9127603c6ac8f1d1bd7c455ad0ce0 249 SUPERFAMILY SSF81606 2 242 5.23E-61 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 SUPERFAMILY SSF53062 562 678 1.05E-11 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 SUPERFAMILY SSF63520 819 913 2.35E-11 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Gene3D G3DSA:1.10.10.10 9 81 2.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 204 219 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Pfam PF00874 PRD domain 828 909 1.4E-8 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Gene3D G3DSA:3.40.50.300 95 284 3.3E-43 T 14-10-2018 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 SMART SM00382 131 285 4.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Gene3D G3DSA:1.10.1790.10 818 913 1.3E-7 T 14-10-2018 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 SUPERFAMILY SSF46785 13 72 6.25E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Pfam PF03610 PTS system fructose IIA component 563 628 5.0E-5 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Gene3D G3DSA:3.40.50.510 558 686 6.2E-30 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 SUPERFAMILY SSF52540 111 351 4.21E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 135 148 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_07425 950aabae58da6f97d8a26f4ec7465901 917 Pfam PF00158 Sigma-54 interaction domain 109 274 1.4E-47 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DKL56_04625 f9c8a5bcb9f0f5728aa1fd6b0917530a 90 Pfam PF00886 Ribosomal protein S16 9 67 1.1E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04625 f9c8a5bcb9f0f5728aa1fd6b0917530a 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.82 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04625 f9c8a5bcb9f0f5728aa1fd6b0917530a 90 Gene3D G3DSA:3.30.1320.10 1 90 1.3E-37 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04625 f9c8a5bcb9f0f5728aa1fd6b0917530a 90 SUPERFAMILY SSF54565 3 86 8.24E-35 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04625 f9c8a5bcb9f0f5728aa1fd6b0917530a 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 2.2E-35 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 Pfam PF00266 Aminotransferase class-V 4 368 9.4E-83 T 14-10-2018 IPR000192 Aminotransferase class V domain DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 SUPERFAMILY SSF53383 4 378 8.25E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 Gene3D G3DSA:1.10.260.50 15 279 9.9E-129 T 14-10-2018 DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 PIRSF PIRSF005572 1 384 2.8E-116 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 Gene3D G3DSA:3.90.1150.10 4 373 9.9E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_03445 21ab7c3ba4d5e2d6f55f58686ed37ea0 385 Gene3D G3DSA:3.40.640.10 61 235 9.9E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 Gene3D G3DSA:1.25.40.10 195 419 8.3E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 Pfam PF07721 Tetratricopeptide repeat 138 158 0.9 T 14-10-2018 IPR011717 Tetratricopeptide TPR-4 GO:0042802 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 Pfam PF13432 Tetratricopeptide repeat 207 247 0.009 T 14-10-2018 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 Gene3D G3DSA:1.25.40.10 4 194 4.7E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 203 236 17.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 271 304 170.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 32 65 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 134 167 100.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 100 133 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 338 371 71.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SMART SM00028 237 270 74.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SUPERFAMILY SSF48452 205 365 1.02E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03730 2a2c6203ae41e7da932208c7e6fe7b57 419 SUPERFAMILY SSF48452 31 194 3.03E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_06140 2b6901d0e93fe36257cfd9a3ae7bcad2 101 Gene3D G3DSA:3.30.70.330 1 95 9.7E-32 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DKL56_06140 2b6901d0e93fe36257cfd9a3ae7bcad2 101 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 21.974 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DKL56_06140 2b6901d0e93fe36257cfd9a3ae7bcad2 101 SUPERFAMILY SSF54189 1 87 4.68E-30 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06140 2b6901d0e93fe36257cfd9a3ae7bcad2 101 Pfam PF00276 Ribosomal protein L23 5 86 1.6E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DKL56_06140 2b6901d0e93fe36257cfd9a3ae7bcad2 101 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_02710 e8205cfe7c1c9f3ce443307583c9b7f8 234 SMART SM00382 29 205 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02710 e8205cfe7c1c9f3ce443307583c9b7f8 234 Gene3D G3DSA:3.40.50.300 1 232 2.5E-55 T 14-10-2018 DKL56_02710 e8205cfe7c1c9f3ce443307583c9b7f8 234 Pfam PF00005 ABC transporter 20 157 4.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02710 e8205cfe7c1c9f3ce443307583c9b7f8 234 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 5 225 3.7E-98 T 14-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit DKL56_02710 e8205cfe7c1c9f3ce443307583c9b7f8 234 SUPERFAMILY SSF52540 4 214 1.38E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02960 a5a4d98f688e6a98664169ebe49e705e 173 Pfam PF15980 Putative Competence protein ComGF 47 146 5.6E-18 T 14-10-2018 IPR016977 Competence operon G, ComGF DKL56_05120 72d75b71e05178aa32eac9e618dbf0a8 300 Gene3D G3DSA:3.40.50.300 101 293 1.8E-46 T 14-10-2018 DKL56_05120 72d75b71e05178aa32eac9e618dbf0a8 300 Pfam PF07319 Primosomal protein DnaI N-terminus 1 90 5.9E-18 T 14-10-2018 IPR009928 Primosomal DnaI, N-terminal DKL56_05120 72d75b71e05178aa32eac9e618dbf0a8 300 Pfam PF01695 IstB-like ATP binding protein 151 269 3.1E-16 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 DKL56_05120 72d75b71e05178aa32eac9e618dbf0a8 300 SUPERFAMILY SSF52540 119 273 6.53E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Gene3D G3DSA:3.40.50.300 1 148 2.1E-39 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 SUPERFAMILY SSF48019 244 427 2.15E-69 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Pfam PF16193 AAA C-terminal domain 172 258 5.0E-22 T 14-10-2018 IPR032423 AAA C-terminal domain DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 SUPERFAMILY SSF52540 2 211 5.85E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 41 144 2.2E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 SMART SM00382 37 149 5.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Gene3D G3DSA:1.10.3710.10 337 434 2.5E-22 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Gene3D G3DSA:1.10.8.60 149 223 6.6E-17 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 45 64 2.6E-5 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 312 331 2.6E-5 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Gene3D G3DSA:1.20.272.10 234 336 2.6E-41 T 14-10-2018 DKL56_03275 e5d4661fad3f3f7a63eb1d1bf14c8c2e 434 Pfam PF12002 MgsA AAA+ ATPase C terminal 259 422 7.9E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DKL56_00685 15482813364718a2739947fa39930142 328 SUPERFAMILY SSF55797 74 211 2.49E-7 T 14-10-2018 IPR035940 CAP superfamily DKL56_00685 15482813364718a2739947fa39930142 328 Pfam PF00188 Cysteine-rich secretory protein family 81 211 4.3E-6 T 14-10-2018 IPR014044 CAP domain DKL56_00685 15482813364718a2739947fa39930142 328 Gene3D G3DSA:3.40.33.10 75 218 7.4E-8 T 14-10-2018 IPR035940 CAP superfamily DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 SUPERFAMILY SSF50677 223 409 6.8E-57 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 765 5.5E-19 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 2 569 2.7E-269 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Gene3D G3DSA:2.30.210.10 570 583 7.4E-256 T 14-10-2018 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Gene3D G3DSA:3.40.50.620 32 569 7.4E-256 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 411 600 1.1E-20 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 218 398 2.4E-68 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Pfam PF09334 tRNA synthetases class I (M) 40 167 3.5E-14 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Gene3D G3DSA:3.90.740.10 225 409 7.4E-256 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 1 803 22.353 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 SUPERFAMILY SSF52374 2 616 1.08E-134 T 14-10-2018 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Gene3D G3DSA:1.10.730.10 617 720 9.0E-11 T 14-10-2018 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 212 231 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 483 501 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 555 565 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 125 142 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 151 167 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 522 544 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 183 196 6.8E-52 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 Gene3D G3DSA:3.10.20.590 742 804 2.1E-22 T 14-10-2018 DKL56_05340 b80fedf9d025b303dfc81c610b2cd7aa 804 SUPERFAMILY SSF47323 620 803 2.62E-39 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06710 fd3daba4ef4e1ec863df52a9d6b55df4 363 SUPERFAMILY SSF53822 44 299 1.37E-12 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_06710 fd3daba4ef4e1ec863df52a9d6b55df4 363 Gene3D G3DSA:3.40.50.2300 150 355 1.4E-91 T 14-10-2018 DKL56_06710 fd3daba4ef4e1ec863df52a9d6b55df4 363 Gene3D G3DSA:3.40.50.2300 45 324 1.4E-91 T 14-10-2018 DKL56_06710 fd3daba4ef4e1ec863df52a9d6b55df4 363 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 47 358 9.5E-62 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DKL56_02485 7fd8e854b94853a4f933737ef73d9a97 213 SUPERFAMILY SSF52833 13 185 9.06E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_02485 7fd8e854b94853a4f933737ef73d9a97 213 Pfam PF13743 Thioredoxin 5 174 1.4E-20 T 14-10-2018 DKL56_02485 7fd8e854b94853a4f933737ef73d9a97 213 Gene3D G3DSA:3.40.30.10 82 210 1.2E-7 T 14-10-2018 DKL56_05810 2136a10ec6377e11405c3b6bbdfc955d 204 SMART SM00382 25 197 3.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05810 2136a10ec6377e11405c3b6bbdfc955d 204 Gene3D G3DSA:3.40.50.300 1 199 1.9E-36 T 14-10-2018 DKL56_05810 2136a10ec6377e11405c3b6bbdfc955d 204 Pfam PF00005 ABC transporter 18 151 1.7E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05810 2136a10ec6377e11405c3b6bbdfc955d 204 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05810 2136a10ec6377e11405c3b6bbdfc955d 204 SUPERFAMILY SSF52540 4 197 6.04E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01130 5fc89cccfbb4afeb3c9e9943d34b6308 288 SUPERFAMILY SSF161098 48 276 3.79E-53 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_01130 5fc89cccfbb4afeb3c9e9943d34b6308 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 281 5.2E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_01130 5fc89cccfbb4afeb3c9e9943d34b6308 288 Gene3D G3DSA:1.10.3720.10 44 288 7.8E-63 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 450 1.0E-71 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 PIRSF PIRSF000726 1 455 8.7E-68 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 Gene3D G3DSA:3.40.1160.10 3 287 2.9E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 Gene3D G3DSA:1.20.120.1320 39 135 2.9E-70 T 14-10-2018 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 Gene3D G3DSA:3.30.2130.10 292 454 7.0E-47 T 14-10-2018 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 SUPERFAMILY SSF55021 376 450 9.54E-17 T 14-10-2018 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 SUPERFAMILY SSF53633 1 290 6.28E-64 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 SUPERFAMILY SSF55021 297 392 1.1E-9 T 14-10-2018 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 Pfam PF13840 ACT domain 383 438 2.0E-6 T 14-10-2018 IPR027795 CASTOR, ACT domain DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 Pfam PF00696 Amino acid kinase family 2 270 2.1E-37 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DKL56_07520 e45c878b503684a49f8d716ea94aceeb 455 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DKL56_04355 d9a1ae9aef9747f586a2cfdaeba39c63 134 Pfam PF02627 Carboxymuconolactone decarboxylase family 35 119 2.6E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DKL56_04355 d9a1ae9aef9747f586a2cfdaeba39c63 134 Gene3D G3DSA:1.20.1290.10 4 125 1.6E-40 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_04355 d9a1ae9aef9747f586a2cfdaeba39c63 134 SUPERFAMILY SSF69118 4 127 5.76E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_01940 c045c8fe1e1f3ac7f742e4f7a17e192e 334 Pfam PF01380 SIS domain 34 129 8.0E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_01940 c045c8fe1e1f3ac7f742e4f7a17e192e 334 Gene3D G3DSA:3.40.50.10490 164 321 1.4E-30 T 14-10-2018 DKL56_01940 c045c8fe1e1f3ac7f742e4f7a17e192e 334 Gene3D G3DSA:3.40.50.10490 1 158 3.3E-22 T 14-10-2018 DKL56_01940 c045c8fe1e1f3ac7f742e4f7a17e192e 334 SUPERFAMILY SSF53697 20 330 1.03E-28 T 14-10-2018 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 Pfam PF01409 tRNA synthetases class II core domain (F) 95 344 3.4E-97 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 22 90 1.3E-17 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 SUPERFAMILY SSF55681 95 345 2.88E-76 T 14-10-2018 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 344 45.357 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 Gene3D G3DSA:3.30.930.10 11 347 5.7E-118 T 14-10-2018 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 SUPERFAMILY SSF46589 15 102 1.05E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DKL56_05010 40ea52069c0eac5364c2bcd0785b5767 349 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 345 1.2E-103 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DKL56_04975 76e553b24a025499b119dd61bc0f2f97 226 Gene3D G3DSA:1.20.1540.10 3 203 1.0E-39 T 14-10-2018 IPR035952 Rhomboid-like superfamily DKL56_04975 76e553b24a025499b119dd61bc0f2f97 226 Pfam PF01694 Rhomboid family 54 193 1.6E-32 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DKL56_04975 76e553b24a025499b119dd61bc0f2f97 226 SUPERFAMILY SSF144091 7 191 4.32E-41 T 14-10-2018 DKL56_07285 163186e0117a29dba2d5e2bd3c73661c 129 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 24 120 1.7E-16 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07285 163186e0117a29dba2d5e2bd3c73661c 129 Gene3D G3DSA:3.80.10.10 1 127 1.5E-10 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07285 163186e0117a29dba2d5e2bd3c73661c 129 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 43 68 5.2E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07285 163186e0117a29dba2d5e2bd3c73661c 129 SUPERFAMILY SSF52047 8 120 6.83E-8 T 14-10-2018 DKL56_00035 d7d99ac24941001ebca7b5654a60dbc0 97 TIGRFAM TIGR00166 S6: ribosomal protein bS6 5 96 6.5E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00035 d7d99ac24941001ebca7b5654a60dbc0 97 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 3 97 17.776 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DKL56_00035 d7d99ac24941001ebca7b5654a60dbc0 97 Gene3D G3DSA:3.30.70.60 1 97 1.5E-31 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DKL56_00035 d7d99ac24941001ebca7b5654a60dbc0 97 Pfam PF01250 Ribosomal protein S6 5 95 2.7E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00035 d7d99ac24941001ebca7b5654a60dbc0 97 SUPERFAMILY SSF54995 4 96 7.19E-32 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 SUPERFAMILY SSF53244 299 434 2.93E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Pfam PF01225 Mur ligase family, catalytic domain 8 106 1.3E-18 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 302 382 5.4E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 436 31.759 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Gene3D G3DSA:3.90.190.20 298 435 3.5E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Pfam PF08245 Mur ligase middle domain 111 280 1.7E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 SUPERFAMILY SSF53623 102 298 5.1E-53 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 SUPERFAMILY SSF51984 6 92 4.45E-19 T 14-10-2018 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Gene3D G3DSA:3.40.50.720 1 94 2.7E-22 T 14-10-2018 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 Gene3D G3DSA:3.40.1190.10 97 297 8.6E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DKL56_05160 09b50ba5faa3d2fc7dbc1fd55b830cea 436 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 7 430 4.0E-121 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_00520 7e6fb67d208b71bd62be7649e475666a 314 Gene3D G3DSA:1.10.10.60 206 251 2.4E-12 T 14-10-2018 DKL56_00520 7e6fb67d208b71bd62be7649e475666a 314 SMART SM00342 219 302 4.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_00520 7e6fb67d208b71bd62be7649e475666a 314 Pfam PF12833 Helix-turn-helix domain 226 303 5.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_00520 7e6fb67d208b71bd62be7649e475666a 314 SUPERFAMILY SSF46689 255 305 7.77E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_00520 7e6fb67d208b71bd62be7649e475666a 314 Gene3D G3DSA:1.10.10.60 252 307 3.0E-11 T 14-10-2018 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 192 28.394 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Pfam PF14520 Helix-hairpin-helix domain 69 126 1.4E-14 T 14-10-2018 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 SMART SM00278 105 124 1.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 SMART SM00278 70 89 0.17 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Gene3D G3DSA:2.40.50.140 1 62 4.3E-16 T 14-10-2018 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 191 7.1E-50 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 SUPERFAMILY SSF47781 63 133 3.34E-20 T 14-10-2018 IPR010994 RuvA domain 2-like DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Pfam PF07499 RuvA, C-terminal domain 148 191 1.5E-11 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 SUPERFAMILY SSF46929 147 191 1.96E-7 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Gene3D G3DSA:1.10.150.20 64 137 9.5E-24 T 14-10-2018 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Pfam PF01330 RuvA N terminal domain 1 59 3.2E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 Gene3D G3DSA:1.10.8.10 145 191 7.7E-6 T 14-10-2018 DKL56_05480 4b74f29d7d41328688a1d60e17b4126f 194 SUPERFAMILY SSF50249 1 60 6.0E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06790 9fd5953cb98f18dc7c350e8791f91fbd 151 Gene3D G3DSA:3.40.930.10 3 151 3.5E-45 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_06790 9fd5953cb98f18dc7c350e8791f91fbd 151 SUPERFAMILY SSF55804 2 148 8.24E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_06790 9fd5953cb98f18dc7c350e8791f91fbd 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 148 1.2E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Gene3D G3DSA:3.30.465.10 360 429 3.0E-7 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Gene3D G3DSA:3.10.580.10 203 353 5.3E-44 T 14-10-2018 DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Pfam PF01595 Domain of unknown function DUF21 12 206 5.3E-40 T 14-10-2018 IPR002550 CNNM, transmembrane domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 SUPERFAMILY SSF56176 357 436 4.09E-10 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 SMART SM00116 295 343 13.0 T 14-10-2018 IPR000644 CBS domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 SMART SM00116 232 282 5.6E-4 T 14-10-2018 IPR000644 CBS domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 SUPERFAMILY SSF54631 213 353 8.97E-30 T 14-10-2018 DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 SMART SM01091 359 439 1.3E-5 T 14-10-2018 IPR005170 Transporter-associated domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Pfam PF00571 CBS domain 223 278 8.7E-8 T 14-10-2018 IPR000644 CBS domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Pfam PF00571 CBS domain 296 342 1.3E-7 T 14-10-2018 IPR000644 CBS domain DKL56_01875 977c017d1ce3c5ff5eaafd269ab654a4 445 Pfam PF03471 Transporter associated domain 363 427 1.3E-7 T 14-10-2018 IPR005170 Transporter-associated domain DKL56_04420 3564fe7d0e309174b48cc1367b031f2b 172 Pfam PF00583 Acetyltransferase (GNAT) family 42 149 1.7E-12 T 14-10-2018 IPR000182 GNAT domain DKL56_04420 3564fe7d0e309174b48cc1367b031f2b 172 SUPERFAMILY SSF55729 3 168 1.21E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_04420 3564fe7d0e309174b48cc1367b031f2b 172 Gene3D G3DSA:3.40.630.30 1 172 6.3E-46 T 14-10-2018 DKL56_00550 1326236a62bf7386f9ee9aa7b74cb086 308 SMART SM00507 151 200 1.9E-8 T 14-10-2018 IPR003615 HNH nuclease DKL56_00550 1326236a62bf7386f9ee9aa7b74cb086 308 Pfam PF01844 HNH endonuclease 164 204 4.5E-10 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 DKL56_00550 1326236a62bf7386f9ee9aa7b74cb086 308 Gene3D G3DSA:3.30.40.60 127 295 2.1E-14 T 14-10-2018 DKL56_02380 c6d877f2ef6665b40f7d57e47e685dc1 299 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 265 1.0E-107 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DKL56_02380 c6d877f2ef6665b40f7d57e47e685dc1 299 SUPERFAMILY SSF53448 1 277 3.15E-71 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_02380 c6d877f2ef6665b40f7d57e47e685dc1 299 Pfam PF00483 Nucleotidyl transferase 5 266 5.9E-39 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DKL56_02380 c6d877f2ef6665b40f7d57e47e685dc1 299 Gene3D G3DSA:3.90.550.10 1 293 1.3E-92 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_07660 d9016ac70a0544840ed3036a3e5a8a66 305 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 53 284 9.5E-64 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like DKL56_07660 d9016ac70a0544840ed3036a3e5a8a66 305 SUPERFAMILY SSF53474 56 278 1.42E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07660 d9016ac70a0544840ed3036a3e5a8a66 305 Gene3D G3DSA:3.40.50.1820 54 297 4.1E-70 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_03355 1470160808d1584711041c19a703ef97 315 Gene3D G3DSA:1.10.150.170 117 221 9.6E-102 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DKL56_03355 1470160808d1584711041c19a703ef97 315 SUPERFAMILY SSF81799 119 220 6.67E-36 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DKL56_03355 1470160808d1584711041c19a703ef97 315 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 315 37.576 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DKL56_03355 1470160808d1584711041c19a703ef97 315 SUPERFAMILY SSF53335 5 315 8.08E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_03355 1470160808d1584711041c19a703ef97 315 Gene3D G3DSA:3.40.50.150 8 314 9.6E-102 T 14-10-2018 DKL56_03355 1470160808d1584711041c19a703ef97 315 PIRSF PIRSF004486 1 315 2.3E-107 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DKL56_03355 1470160808d1584711041c19a703ef97 315 Pfam PF01795 MraW methylase family 2 314 4.5E-120 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DKL56_03355 1470160808d1584711041c19a703ef97 315 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3 314 8.3E-113 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Pfam PF02151 UvrB/uvrC motif 309 344 1.3E-5 T 14-10-2018 IPR001943 UVR domain GO:0005515 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Gene3D G3DSA:1.10.8.60 586 677 2.5E-21 T 14-10-2018 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Gene3D G3DSA:1.10.8.60 238 320 1.1E-25 T 14-10-2018 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 SMART SM01086 586 673 3.1E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 586 657 3.2E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Pfam PF07724 AAA domain (Cdc48 subfamily) 420 580 2.2E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 SUPERFAMILY SSF52540 371 656 1.99E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 97 229 8.9E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 190 202 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 SMART SM00382 92 238 2.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 SMART SM00382 421 566 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Gene3D G3DSA:3.40.50.300 352 585 2.0E-80 T 14-10-2018 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 425 443 9.3E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 499 517 9.3E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 532 546 9.3E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 470 488 9.3E-35 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 SUPERFAMILY SSF52540 56 346 2.48E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07650 2cb5e595deac9cc10164610c5dbea45b 699 Gene3D G3DSA:3.40.50.300 47 237 3.8E-64 T 14-10-2018 DKL56_05225 20cc3158451568a23792ee3052550a63 685 Gene3D G3DSA:1.10.3810.10 63 261 1.1E-67 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_05225 20cc3158451568a23792ee3052550a63 685 SUPERFAMILY SSF53955 59 271 4.5E-68 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DKL56_05225 20cc3158451568a23792ee3052550a63 685 Pfam PF00905 Penicillin binding protein transpeptidase domain 341 592 2.2E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DKL56_05225 20cc3158451568a23792ee3052550a63 685 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 81 625 8.5E-175 T 14-10-2018 DKL56_05225 20cc3158451568a23792ee3052550a63 685 Gene3D G3DSA:3.40.710.10 273 630 1.1E-122 T 14-10-2018 DKL56_05225 20cc3158451568a23792ee3052550a63 685 Pfam PF00912 Transglycosylase 75 245 1.8E-58 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_05225 20cc3158451568a23792ee3052550a63 685 SUPERFAMILY SSF56601 227 636 2.56E-101 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_04540 902391b146378a3f6ecde270ba688112 295 Pfam PF03466 LysR substrate binding domain 92 294 1.8E-11 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_04540 902391b146378a3f6ecde270ba688112 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04540 902391b146378a3f6ecde270ba688112 295 Gene3D G3DSA:3.40.190.290 92 295 8.2E-12 T 14-10-2018 DKL56_04540 902391b146378a3f6ecde270ba688112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04540 902391b146378a3f6ecde270ba688112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04540 902391b146378a3f6ecde270ba688112 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_04540 902391b146378a3f6ecde270ba688112 295 SUPERFAMILY SSF53850 92 293 1.19E-10 T 14-10-2018 DKL56_04540 902391b146378a3f6ecde270ba688112 295 Gene3D G3DSA:1.10.10.10 1 84 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04540 902391b146378a3f6ecde270ba688112 295 SUPERFAMILY SSF46785 1 81 2.88E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_06250 b89658f58839c28a2bb90eb4b24b9b7c 419 SUPERFAMILY SSF52402 10 222 6.02E-48 T 14-10-2018 DKL56_06250 b89658f58839c28a2bb90eb4b24b9b7c 419 Gene3D G3DSA:3.40.50.620 6 230 1.4E-60 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_06250 b89658f58839c28a2bb90eb4b24b9b7c 419 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 3 319 21.84 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DKL56_06250 b89658f58839c28a2bb90eb4b24b9b7c 419 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 202 1.6E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DKL56_06250 b89658f58839c28a2bb90eb4b24b9b7c 419 Pfam PF01171 PP-loop family 19 199 7.7E-53 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DKL56_00280 0996de9a0c759e5d858a2148cbb92613 180 SUPERFAMILY SSF89028 4 175 5.89E-53 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DKL56_00280 0996de9a0c759e5d858a2148cbb92613 180 Pfam PF01923 Cobalamin adenosyltransferase 5 165 9.8E-52 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DKL56_00280 0996de9a0c759e5d858a2148cbb92613 180 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 11 142 9.0E-45 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DKL56_00280 0996de9a0c759e5d858a2148cbb92613 180 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 6 175 2.6E-52 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DKL56_00280 0996de9a0c759e5d858a2148cbb92613 180 Gene3D G3DSA:1.20.1200.10 15 180 5.3E-53 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 SUPERFAMILY SSF46785 745 809 1.36E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 Pfam PF09397 Ftsk gamma domain 746 806 5.4E-31 T 14-10-2018 IPR018541 FtsK gamma domain DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 SMART SM00382 483 666 0.0025 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 SMART SM00843 744 809 1.9E-41 T 14-10-2018 IPR018541 FtsK gamma domain DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 SUPERFAMILY SSF52540 421 715 2.12E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 Gene3D G3DSA:3.30.980.40 340 443 1.1E-36 T 14-10-2018 DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 Gene3D G3DSA:3.40.50.300 445 731 1.9E-109 T 14-10-2018 DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 Pfam PF01580 FtsK/SpoIIIE family 450 645 2.5E-57 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DKL56_02540 d9c7c336769bafb972d489ff23e146eb 815 Gene3D G3DSA:1.10.10.10 748 811 3.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_07190 d7b75bd3f952bad23a596fea32aedad4 311 Gene3D G3DSA:3.40.190.10 45 277 5.9E-65 T 14-10-2018 DKL56_07190 d7b75bd3f952bad23a596fea32aedad4 311 Gene3D G3DSA:3.40.190.10 137 244 5.9E-65 T 14-10-2018 DKL56_07190 d7b75bd3f952bad23a596fea32aedad4 311 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 45 296 1.1E-61 T 14-10-2018 DKL56_07190 d7b75bd3f952bad23a596fea32aedad4 311 SUPERFAMILY SSF53850 38 305 2.56E-44 T 14-10-2018 DKL56_07190 d7b75bd3f952bad23a596fea32aedad4 311 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 10 268 9.6E-68 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DKL56_01300 356fe5a7291a514c964cabf5dcc1a7ec 254 Gene3D G3DSA:3.40.109.10 4 249 6.3E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_01300 356fe5a7291a514c964cabf5dcc1a7ec 254 PIRSF PIRSF005426 2 250 1.2E-73 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DKL56_01300 356fe5a7291a514c964cabf5dcc1a7ec 254 SUPERFAMILY SSF55469 4 249 9.55E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DKL56_01300 356fe5a7291a514c964cabf5dcc1a7ec 254 Pfam PF00881 Nitroreductase family 13 164 8.8E-9 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 Pfam PF00953 Glycosyl transferase family 4 83 248 6.6E-34 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 49 61 6.5E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 21 318 1.4E-88 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 6 322 21.618 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03370 8096fa9b4ab9170035dfb92119f16fa3 322 ProSitePatterns PS01347 MraY family signature 1. 49 61 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_05170 ab6574c8751eaf1eea8d46d65a98441a 106 SUPERFAMILY SSF52833 5 104 3.43E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_05170 ab6574c8751eaf1eea8d46d65a98441a 106 Gene3D G3DSA:3.40.30.10 1 104 8.7E-22 T 14-10-2018 DKL56_05170 ab6574c8751eaf1eea8d46d65a98441a 106 Pfam PF00085 Thioredoxin 6 103 1.5E-17 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 Gene3D G3DSA:3.40.50.10240 2 229 6.4E-68 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 28 128 4.2E-18 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 SUPERFAMILY SSF63999 20 137 5.89E-30 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 151 214 8.5E-9 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 19 217 2.0E-49 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_04735 9039d6470808598468db69dcc28aea1d 230 SMART SM00983 149 215 1.2E-13 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 DKL56_05130 b8cf978cdea2bb44221452f56df7bee5 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 80.539 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DKL56_05130 b8cf978cdea2bb44221452f56df7bee5 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 7.6E-59 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DKL56_05130 b8cf978cdea2bb44221452f56df7bee5 155 Pfam PF03477 ATP cone domain 50 136 6.2E-21 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 Pfam PF03466 LysR substrate binding domain 94 277 3.3E-8 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 SUPERFAMILY SSF46785 7 89 1.85E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 Gene3D G3DSA:1.10.10.10 4 93 5.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 7.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 7.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 7.1E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03005 9f75bf47cce24d2152cb497f698fdcb8 292 SUPERFAMILY SSF53850 104 278 1.41E-10 T 14-10-2018 DKL56_02860 34af1e8eed47bae5bdd812c5a7bc7a67 509 Gene3D G3DSA:3.40.50.2000 243 501 8.4E-48 T 14-10-2018 DKL56_02860 34af1e8eed47bae5bdd812c5a7bc7a67 509 Gene3D G3DSA:3.40.50.2000 307 490 8.4E-48 T 14-10-2018 DKL56_02860 34af1e8eed47bae5bdd812c5a7bc7a67 509 SUPERFAMILY SSF53756 232 501 1.2E-50 T 14-10-2018 DKL56_02860 34af1e8eed47bae5bdd812c5a7bc7a67 509 Pfam PF00534 Glycosyl transferases group 1 325 485 6.5E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 Gene3D G3DSA:3.40.50.620 1 341 1.0E-136 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 216 224 3.8E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 200 210 3.8E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 3.8E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 3.8E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 3.8E-29 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 SUPERFAMILY SSF48163 307 491 2.88E-39 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 332 4.7E-115 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 Gene3D G3DSA:1.10.10.350 401 501 2.1E-19 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 5 493 32.694 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 490 3.5E-170 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DKL56_05720 8b4a502a88ae0b938051ec44d6adb445 501 SUPERFAMILY SSF52374 5 325 1.53E-106 T 14-10-2018 DKL56_05545 e91b2f580f11e8dd823d4a1b3e174605 196 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 54 182 1.2E-33 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DKL56_05545 e91b2f580f11e8dd823d4a1b3e174605 196 Gene3D G3DSA:3.40.630.30 42 194 4.5E-34 T 14-10-2018 DKL56_05545 e91b2f580f11e8dd823d4a1b3e174605 196 SUPERFAMILY SSF55729 46 186 4.05E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_05545 e91b2f580f11e8dd823d4a1b3e174605 196 Pfam PF00583 Acetyltransferase (GNAT) family 69 162 5.0E-18 T 14-10-2018 IPR000182 GNAT domain DKL56_00530 5f9a78cd1c7217432d30f164c42259d6 189 SUPERFAMILY SSF140478 29 177 5.75E-54 T 14-10-2018 IPR023353 LemA-like domain superfamily DKL56_00530 5f9a78cd1c7217432d30f164c42259d6 189 Pfam PF04011 LemA family 11 189 5.7E-68 T 14-10-2018 IPR007156 LemA DKL56_00530 5f9a78cd1c7217432d30f164c42259d6 189 Gene3D G3DSA:1.20.1440.20 19 189 3.7E-60 T 14-10-2018 IPR023353 LemA-like domain superfamily DKL56_06590 9c9364ce44342a5524c0ad85efdfb58c 528 Pfam PF03217 SLAP domain 142 194 1.2E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_06590 9c9364ce44342a5524c0ad85efdfb58c 528 Pfam PF03217 SLAP domain 224 279 8.8E-14 T 14-10-2018 IPR024968 SLAP domain DKL56_06590 9c9364ce44342a5524c0ad85efdfb58c 528 Pfam PF03217 SLAP domain 61 119 9.7E-11 T 14-10-2018 IPR024968 SLAP domain DKL56_06590 9c9364ce44342a5524c0ad85efdfb58c 528 Pfam PF07554 FIVAR domain 396 462 6.7E-7 T 14-10-2018 DKL56_06590 9c9364ce44342a5524c0ad85efdfb58c 528 Gene3D G3DSA:1.20.120.1850 396 519 4.9E-6 T 14-10-2018 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 Gene3D G3DSA:3.20.20.80 1 471 4.2E-147 T 14-10-2018 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 Pfam PF00232 Glycosyl hydrolase family 1 2 470 8.1E-131 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06375 2dd96642d6e1edc56fd4fff9a9930ec7 471 SUPERFAMILY SSF51445 2 470 1.57E-149 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:2.40.50.100 970 1034 2.5E-59 T 14-10-2018 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF04998 RNA polymerase Rpb1, domain 5 773 1133 3.9E-59 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 386 6.1E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF00623 RNA polymerase Rpb1, domain 2 381 474 3.1E-29 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 331 1.5E-87 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 SUPERFAMILY SSF64484 5 1182 0.0 T 14-10-2018 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:1.10.40.90 363 405 2.8E-21 T 14-10-2018 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF05000 RNA polymerase Rpb1, domain 4 695 757 1.4E-12 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:1.10.1790.20 954 1133 2.5E-59 T 14-10-2018 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1186 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 SMART SM00663 224 503 1.2E-171 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1196 18.121 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 666 2.7E-26 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:1.10.150.390 1135 1193 8.0E-27 T 14-10-2018 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:1.10.132.30 663 797 1.1E-51 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DKL56_06185 89e2d4a4f104b14c1b5d1266c73856c2 1219 Gene3D G3DSA:1.10.274.100 479 662 1.2E-35 T 14-10-2018 DKL56_01215 8185d3fc6298723f23080dffde61b5f6 175 Gene3D G3DSA:3.40.630.30 1 175 8.2E-30 T 14-10-2018 DKL56_01215 8185d3fc6298723f23080dffde61b5f6 175 Pfam PF13302 Acetyltransferase (GNAT) domain 4 142 1.9E-23 T 14-10-2018 IPR000182 GNAT domain DKL56_01215 8185d3fc6298723f23080dffde61b5f6 175 SUPERFAMILY SSF55729 2 144 3.83E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 511 9.6E-22 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 PIRSF PIRSF003128 1 560 4.0E-169 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 SUPERFAMILY SSF52540 1 513 1.4E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 1.2E-159 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 Gene3D G3DSA:3.40.50.300 257 556 2.4E-54 T 14-10-2018 DKL56_04795 2ff9d050d80c20d200a0bc7577444c11 561 Gene3D G3DSA:3.40.50.300 1 252 7.8E-46 T 14-10-2018 DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 SMART SM00062 49 274 2.3E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 315 496 2.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 Gene3D G3DSA:3.40.190.10 46 260 5.7E-63 T 14-10-2018 DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 264 1.9E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 SUPERFAMILY SSF161098 295 481 5.1E-46 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 Gene3D G3DSA:1.10.3720.10 286 497 1.9E-56 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 Gene3D G3DSA:3.40.190.10 139 232 5.7E-63 T 14-10-2018 DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 295 390 5.0E-27 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_06920 daba60195936f434de9c528c2c1f5df0 498 SUPERFAMILY SSF53850 1 265 2.77E-54 T 14-10-2018 DKL56_06690 b51517c28f7c6ea0a93441043924d2fe 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 297 4.2E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DKL56_00380 e4e3218f9006d68ac32f827e3754f55e 464 SUPERFAMILY SSF51338 402 454 4.8E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_00380 e4e3218f9006d68ac32f827e3754f55e 464 Gene3D G3DSA:2.30.40.10 17 451 1.6E-136 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_00380 e4e3218f9006d68ac32f827e3754f55e 464 SUPERFAMILY SSF51556 80 400 4.68E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_00380 e4e3218f9006d68ac32f827e3754f55e 464 Pfam PF01979 Amidohydrolase family 77 452 1.1E-55 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_00380 e4e3218f9006d68ac32f827e3754f55e 464 Gene3D G3DSA:3.20.20.140 81 402 1.6E-136 T 14-10-2018 DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 SUPERFAMILY SSF74982 3 133 5.62E-49 T 14-10-2018 IPR023620 Small protein B DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 7.7E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 Pfam PF01668 SmpB protein 10 151 2.4E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 133 1.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 Hamap MF_00023 SsrA-binding protein [smpB]. 1 152 68.224 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 Gene3D G3DSA:2.40.280.10 2 130 1.3E-46 T 14-10-2018 IPR023620 Small protein B DKL56_01865 ea2e50c665716a5c7341222d2523a5a2 152 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site DKL56_03480 80b2097295fa87329c950610f6882ec5 235 Gene3D G3DSA:3.40.50.300 1 233 1.0E-45 T 14-10-2018 DKL56_03480 80b2097295fa87329c950610f6882ec5 235 SMART SM00382 28 212 2.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03480 80b2097295fa87329c950610f6882ec5 235 Pfam PF00005 ABC transporter 18 163 5.9E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_03480 80b2097295fa87329c950610f6882ec5 235 SUPERFAMILY SSF52540 3 219 9.35E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 Gene3D G3DSA:1.10.10.10 1 68 3.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 SUPERFAMILY SSF53697 88 222 5.06E-25 T 14-10-2018 DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 Pfam PF01380 SIS domain 114 210 2.9E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 63 2.8E-11 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 Gene3D G3DSA:3.40.50.10490 80 253 1.7E-23 T 14-10-2018 DKL56_01435 36520d9eb0e60ac111e13e1dc771e7d5 253 SUPERFAMILY SSF46689 5 64 4.48E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 26 136 8.3E-17 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 SUPERFAMILY SSF56784 5 136 3.86E-24 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 134 4.9E-12 T 14-10-2018 DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 3 159 4.7E-35 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 9 128 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_05075 69bc71bdd41ad419124163d15cc5af9d 174 Gene3D G3DSA:3.40.50.1000 19 151 1.2E-23 T 14-10-2018 IPR023214 HAD superfamily DKL56_01145 2372499e05bb4db96ee92278aa09097e 436 Pfam PF13416 Bacterial extracellular solute-binding protein 67 373 1.7E-47 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DKL56_01145 2372499e05bb4db96ee92278aa09097e 436 Gene3D G3DSA:3.40.190.10 44 436 2.0E-68 T 14-10-2018 DKL56_01145 2372499e05bb4db96ee92278aa09097e 436 SUPERFAMILY SSF53850 46 417 3.47E-65 T 14-10-2018 DKL56_06260 490a2efdd8e4b04bb0a702972de63ca9 125 Pfam PF04977 Septum formation initiator 43 120 6.4E-18 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DKL56_03125 c9b0729beee57a59b7354b3363815350 537 Gene3D G3DSA:1.20.1560.10 1 318 2.2E-25 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_03125 c9b0729beee57a59b7354b3363815350 537 SUPERFAMILY SSF90123 9 312 2.35E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_03125 c9b0729beee57a59b7354b3363815350 537 SUPERFAMILY SSF52540 326 533 8.11E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03125 c9b0729beee57a59b7354b3363815350 537 Gene3D G3DSA:3.40.50.300 319 536 1.7E-33 T 14-10-2018 DKL56_03125 c9b0729beee57a59b7354b3363815350 537 Pfam PF00664 ABC transporter transmembrane region 18 286 4.7E-11 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_03125 c9b0729beee57a59b7354b3363815350 537 Pfam PF00005 ABC transporter 348 494 7.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 SUPERFAMILY SSF50447 1 207 4.06E-71 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 Gene3D G3DSA:2.40.30.10 133 208 1.9E-13 T 14-10-2018 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 Pfam PF00297 Ribosomal protein L3 99 178 5.4E-13 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 202 1.4E-80 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 205 36.033 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 Gene3D G3DSA:2.40.50.620 33 94 2.6E-14 T 14-10-2018 DKL56_06150 566ab9fd641af2566d15475d1cb9f06a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site DKL56_04150 44057abd0fdac7896830d31d3e9eb912 318 Gene3D G3DSA:3.40.50.300 106 312 1.1E-75 T 14-10-2018 DKL56_04150 44057abd0fdac7896830d31d3e9eb912 318 Pfam PF02562 PhoH-like protein 109 312 8.2E-95 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 DKL56_04150 44057abd0fdac7896830d31d3e9eb912 318 SUPERFAMILY SSF52540 91 284 1.61E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05755 87e5fbe4f2ab71e690a13ee7bf9b64b3 311 SUPERFAMILY SSF52540 3 128 2.86E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05755 87e5fbe4f2ab71e690a13ee7bf9b64b3 311 Gene3D G3DSA:3.40.50.300 1 170 9.3E-21 T 14-10-2018 DKL56_05755 87e5fbe4f2ab71e690a13ee7bf9b64b3 311 Pfam PF13671 AAA domain 5 113 3.7E-7 T 14-10-2018 DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 SUPERFAMILY SSF52317 291 534 8.87E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 Gene3D G3DSA:3.40.50.880 288 538 7.7E-97 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 TIGRFAM TIGR00337 PyrG: CTP synthase 1 530 1.3E-235 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 Hamap MF_01227 CTP synthase [pyrG]. 2 535 48.902 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 Gene3D G3DSA:3.40.50.300 1 287 7.1E-128 T 14-10-2018 DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 SUPERFAMILY SSF52540 1 270 6.98E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 Pfam PF00117 Glutamine amidotransferase class-I 304 528 1.1E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase DKL56_06490 71026287f0b6eea32f5d0d6404e5651c 539 Pfam PF06418 CTP synthase N-terminus 3 267 1.8E-123 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 PIRSF PIRSF002211 1 60 2.5E-22 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 Gene3D G3DSA:3.30.1390.20 1 60 3.7E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 SUPERFAMILY SSF55129 2 60 5.23E-17 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 15.438 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.4E-16 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DKL56_06060 abe9d578aecd3930b5a886d0a5ed62c3 61 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.4E-18 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02850 4f047a0ff4a1145b0c0aac5c65dae84d 145 Pfam PF03965 Penicillinase repressor 10 122 4.4E-34 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DKL56_02850 4f047a0ff4a1145b0c0aac5c65dae84d 145 SUPERFAMILY SSF46785 8 123 3.27E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02850 4f047a0ff4a1145b0c0aac5c65dae84d 145 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 9 138 1.7E-48 T 14-10-2018 IPR014071 Copper transport repressor CopY/TcrY DKL56_02850 4f047a0ff4a1145b0c0aac5c65dae84d 145 Gene3D G3DSA:1.10.10.10 4 84 4.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02850 4f047a0ff4a1145b0c0aac5c65dae84d 145 PIRSF PIRSF019455 2 135 4.6E-39 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 Gene3D G3DSA:3.40.1410.10 79 231 4.8E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 SUPERFAMILY SSF46785 4 71 7.26E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 Gene3D G3DSA:1.10.10.10 2 67 6.4E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 Pfam PF07702 UTRA domain 98 229 2.0E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 SUPERFAMILY SSF64288 81 233 7.07E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 1.6E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_05830 be1d40405f4fb27b9c06c5ae066bc794 237 SMART SM00866 92 231 1.1E-22 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 PIRSF PIRSF002144 1 93 6.5E-33 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 Pfam PF00203 Ribosomal protein S19 3 83 2.3E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 90 1.4E-44 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 SUPERFAMILY SSF54570 2 84 9.29E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.969 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06130 f86018d1abcac1eb397faad175747bff 93 Gene3D G3DSA:3.30.860.10 1 92 9.6E-39 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06280 c03922dfc6e5a186d34a0ffa9f08e51d 235 SUPERFAMILY SSF54631 1 122 5.68E-21 T 14-10-2018 DKL56_06280 c03922dfc6e5a186d34a0ffa9f08e51d 235 PIRSF PIRSF035040 1 216 1.1E-97 T 14-10-2018 IPR017036 Uncharacterised conserved protein UCP035040, CBS-type DKL56_06280 c03922dfc6e5a186d34a0ffa9f08e51d 235 Pfam PF00571 CBS domain 14 58 5.7E-5 T 14-10-2018 IPR000644 CBS domain DKL56_06280 c03922dfc6e5a186d34a0ffa9f08e51d 235 Gene3D G3DSA:3.10.580.10 1 128 2.6E-19 T 14-10-2018 DKL56_06310 6dd09b94846632580d88d281c0f42e66 281 Gene3D G3DSA:3.40.190.10 45 256 7.1E-64 T 14-10-2018 DKL56_06310 6dd09b94846632580d88d281c0f42e66 281 SUPERFAMILY SSF53850 7 263 1.09E-54 T 14-10-2018 DKL56_06310 6dd09b94846632580d88d281c0f42e66 281 Gene3D G3DSA:3.40.190.10 137 226 7.1E-64 T 14-10-2018 DKL56_06310 6dd09b94846632580d88d281c0f42e66 281 SMART SM00062 50 267 1.1E-60 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_06310 6dd09b94846632580d88d281c0f42e66 281 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 255 2.4E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_06800 955c763619bda8660337db1c4476ee61 421 Gene3D G3DSA:3.40.50.300 198 370 1.7E-32 T 14-10-2018 DKL56_06800 955c763619bda8660337db1c4476ee61 421 PIRSF PIRSF006809 2 421 3.5E-138 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 Pfam PF01926 50S ribosome-binding GTPase 200 327 1.4E-16 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 SUPERFAMILY SSF52540 198 369 4.77E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06800 955c763619bda8660337db1c4476ee61 421 Pfam PF16360 GTP-binding GTPase Middle Region 114 193 1.8E-23 T 14-10-2018 IPR032305 GTP-binding protein, middle domain DKL56_06800 955c763619bda8660337db1c4476ee61 421 Gene3D G3DSA:3.40.50.11060 18 139 3.2E-38 T 14-10-2018 DKL56_06800 955c763619bda8660337db1c4476ee61 421 Hamap MF_00900 GTPase HflX [hflX]. 27 393 43.899 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 201 221 3.9E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 276 294 3.9E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 363 7.4E-126 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DKL56_06800 955c763619bda8660337db1c4476ee61 421 Pfam PF13167 GTP-binding GTPase N-terminal 25 111 2.1E-28 T 14-10-2018 IPR025121 GTPase HflX, N-terminal DKL56_05565 20840cc2b20805172cce960781a4137b 284 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 232 36.993 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DKL56_05565 20840cc2b20805172cce960781a4137b 284 Gene3D G3DSA:3.30.950.10 121 237 2.0E-41 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DKL56_05565 20840cc2b20805172cce960781a4137b 284 PIRSF PIRSF005917 1 284 1.5E-105 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DKL56_05565 20840cc2b20805172cce960781a4137b 284 Gene3D G3DSA:3.40.1010.10 1 120 1.2E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DKL56_05565 20840cc2b20805172cce960781a4137b 284 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DKL56_05565 20840cc2b20805172cce960781a4137b 284 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 282 4.0E-81 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DKL56_05565 20840cc2b20805172cce960781a4137b 284 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 13 213 1.2E-26 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DKL56_05565 20840cc2b20805172cce960781a4137b 284 SUPERFAMILY SSF53790 11 230 7.72E-82 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 Pfam PF01420 Type I restriction modification DNA specificity domain 17 192 2.2E-14 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 Pfam PF01420 Type I restriction modification DNA specificity domain 220 376 5.0E-15 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 SUPERFAMILY SSF116734 4 203 4.09E-34 T 14-10-2018 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 SUPERFAMILY SSF116734 215 389 6.21E-31 T 14-10-2018 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 Gene3D G3DSA:1.10.287.1120 168 386 7.5E-41 T 14-10-2018 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 Gene3D G3DSA:3.90.220.20 206 345 7.5E-41 T 14-10-2018 DKL56_02275 50f4781493578cd9276eaf1a33d85749 389 Gene3D G3DSA:3.90.220.20 2 162 4.9E-20 T 14-10-2018 DKL56_00420 f0da997754877565b4b219157bd7eff9 388 Pfam PF03217 SLAP domain 115 164 3.9E-7 T 14-10-2018 IPR024968 SLAP domain DKL56_00420 f0da997754877565b4b219157bd7eff9 388 Pfam PF03217 SLAP domain 47 96 2.5E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_01335 39b49c3d85907c59232df4c788aef5fe 371 SUPERFAMILY SSF53697 18 340 5.44E-39 T 14-10-2018 DKL56_01335 39b49c3d85907c59232df4c788aef5fe 371 Gene3D G3DSA:3.40.50.10490 1 187 2.0E-24 T 14-10-2018 DKL56_01335 39b49c3d85907c59232df4c788aef5fe 371 Gene3D G3DSA:3.40.50.10490 188 333 1.3E-42 T 14-10-2018 DKL56_01335 39b49c3d85907c59232df4c788aef5fe 371 Pfam PF01380 SIS domain 208 293 7.9E-8 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_00395 c924ef73dfd897e8e98ccfec562a39b4 76 SMART SM01117 4 75 2.0E-9 T 14-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain DKL56_00395 c924ef73dfd897e8e98ccfec562a39b4 76 Gene3D G3DSA:3.10.120.10 1 74 6.6E-12 T 14-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily DKL56_00395 c924ef73dfd897e8e98ccfec562a39b4 76 SUPERFAMILY SSF55856 3 66 1.05E-13 T 14-10-2018 IPR036400 Cytochrome b5-like heme/steroid binding domain superfamily DKL56_00395 c924ef73dfd897e8e98ccfec562a39b4 76 Pfam PF00173 Cytochrome b5-like Heme/Steroid binding domain 5 64 1.7E-8 T 14-10-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain DKL56_02245 8e75becdc74554d014f8a341977407f2 121 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 3.8E-60 T 14-10-2018 IPR012650 Conserved hypothetical protein CHP02328 DKL56_02245 8e75becdc74554d014f8a341977407f2 121 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 8.6E-32 T 14-10-2018 IPR004260 Pyrimidine dimer DNA glycosylase DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 Pfam PF00005 ABC transporter 18 163 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 SUPERFAMILY SSF52540 2 212 1.63E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 4 207 4.1E-80 T 14-10-2018 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 Gene3D G3DSA:3.40.50.300 1 219 3.9E-64 T 14-10-2018 DKL56_06830 67b7c3fa67858b2e4cfb7c4d56f40b52 220 SMART SM00382 26 219 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03855 1200ec7da8f83e513c46744ec0e92e6b 211 Pfam PF02660 Glycerol-3-phosphate acyltransferase 12 188 1.9E-48 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_03855 1200ec7da8f83e513c46744ec0e92e6b 211 SMART SM01207 11 189 1.7E-72 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_03855 1200ec7da8f83e513c46744ec0e92e6b 211 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 195 4.4E-54 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_03855 1200ec7da8f83e513c46744ec0e92e6b 211 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 8 197 18.892 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DKL56_05940 9dbe21c6719ccc647c055ecab2ab7700 427 Pfam PF00535 Glycosyl transferase family 2 60 231 6.8E-34 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DKL56_05940 9dbe21c6719ccc647c055ecab2ab7700 427 Gene3D G3DSA:3.90.550.10 36 278 1.7E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_05940 9dbe21c6719ccc647c055ecab2ab7700 427 SUPERFAMILY SSF53448 52 337 4.97E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_01660 e0d2c012f021086b4e003750ce851383 193 Pfam PF06265 Protein of unknown function (DUF1027) 38 121 2.7E-27 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 DKL56_01660 e0d2c012f021086b4e003750ce851383 193 Gene3D G3DSA:3.50.4.20 28 133 7.9E-31 T 14-10-2018 IPR038141 YutD-like superfamily DKL56_01340 87f19894e4685889797e226690cc7be3 155 Gene3D G3DSA:3.40.35.10 1 155 5.4E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01340 87f19894e4685889797e226690cc7be3 155 SUPERFAMILY SSF52728 1 154 1.44E-44 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01340 87f19894e4685889797e226690cc7be3 155 Pfam PF03830 PTS system sorbose subfamily IIB component 2 148 1.6E-45 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_07535 b7166f2790d602e91e18053cfed27589 289 Gene3D G3DSA:2.60.120.10 8 94 8.5E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DKL56_07535 b7166f2790d602e91e18053cfed27589 289 Pfam PF12833 Helix-turn-helix domain 206 283 1.3E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_07535 b7166f2790d602e91e18053cfed27589 289 Gene3D G3DSA:1.10.10.60 184 232 1.9E-16 T 14-10-2018 DKL56_07535 b7166f2790d602e91e18053cfed27589 289 Gene3D G3DSA:1.10.10.60 233 285 4.4E-5 T 14-10-2018 DKL56_07535 b7166f2790d602e91e18053cfed27589 289 SUPERFAMILY SSF51182 25 207 8.3E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DKL56_07535 b7166f2790d602e91e18053cfed27589 289 SUPERFAMILY SSF46689 184 233 4.48E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_07535 b7166f2790d602e91e18053cfed27589 289 SMART SM00342 199 282 5.3E-16 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_03105 5106e18b0b58845a90b33ddb03824b39 106 Gene3D G3DSA:3.40.50.2300 5 106 1.9E-37 T 14-10-2018 DKL56_03105 5106e18b0b58845a90b33ddb03824b39 106 SUPERFAMILY SSF52794 4 105 4.45E-37 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_03105 5106e18b0b58845a90b33ddb03824b39 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 99 3.1E-23 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 Pfam PF01467 Cytidylyltransferase-like 31 185 7.7E-27 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 27 212 29.776 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 29 92 2.7E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 SUPERFAMILY SSF52374 26 211 8.44E-54 T 14-10-2018 DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 Gene3D G3DSA:3.40.50.620 27 212 3.2E-62 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05065 ce44c287fcfdec8b3401ad5833573b70 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 31 211 2.0E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DKL56_07365 c421992bf65c392599f156bfe0237f37 248 SUPERFAMILY SSF46785 2 84 5.44E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_07365 c421992bf65c392599f156bfe0237f37 248 Gene3D G3DSA:1.10.10.10 6 94 2.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_07365 c421992bf65c392599f156bfe0237f37 248 SUPERFAMILY SSF53850 117 234 1.7E-5 T 14-10-2018 DKL56_07365 c421992bf65c392599f156bfe0237f37 248 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.0E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 SMART SM00855 3 184 1.8E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 Gene3D G3DSA:3.40.50.1240 2 224 2.7E-65 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 223 36.695 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 127 1.9E-26 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 137 214 1.5E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 223 2.1E-73 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 SUPERFAMILY SSF53254 1 217 5.63E-58 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 PIRSF PIRSF000709 3 112 2.0E-6 T 14-10-2018 DKL56_05760 ecad6f0c21b69a67c2d823be7d00c767 224 PIRSF PIRSF000709 140 215 7.8 T 14-10-2018 DKL56_07235 a3ed4b28257ce2a91970392afa9363f6 416 Pfam PF07690 Major Facilitator Superfamily 16 364 1.1E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_07235 a3ed4b28257ce2a91970392afa9363f6 416 SUPERFAMILY SSF103473 10 413 1.11E-24 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07235 a3ed4b28257ce2a91970392afa9363f6 416 Gene3D G3DSA:1.20.1250.20 4 410 6.0E-21 T 14-10-2018 DKL56_07490 e262bfdee835eba99fea914b0fd4827c 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 237 250 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DKL56_07490 e262bfdee835eba99fea914b0fd4827c 396 SUPERFAMILY SSF53383 19 390 3.99E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_07490 e262bfdee835eba99fea914b0fd4827c 396 Pfam PF00155 Aminotransferase class I and II 36 385 3.6E-66 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DKL56_07490 e262bfdee835eba99fea914b0fd4827c 396 Gene3D G3DSA:3.90.1150.10 35 385 1.7E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_07490 e262bfdee835eba99fea914b0fd4827c 396 Gene3D G3DSA:3.40.640.10 65 287 1.7E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_00610 afb8b4e801344d298d571c5b34cf66f5 257 Pfam PF03741 Integral membrane protein TerC family 30 219 5.6E-50 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DKL56_00610 afb8b4e801344d298d571c5b34cf66f5 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 28 249 3.2E-78 T 14-10-2018 IPR022493 Integral membrane YkoY DKL56_01925 6873bb552ded9cf4594ff8b06c4c0807 157 SUPERFAMILY SSF52728 1 156 2.62E-43 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01925 6873bb552ded9cf4594ff8b06c4c0807 157 Gene3D G3DSA:3.40.35.10 1 157 3.6E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01925 6873bb552ded9cf4594ff8b06c4c0807 157 Pfam PF03830 PTS system sorbose subfamily IIB component 2 148 3.3E-44 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_02360 298b03fa5fb023658a98482dac654cef 177 Pfam PF04138 GtrA-like protein 37 151 1.5E-16 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DKL56_07125 5f67a74d9fbe4ab5c7eb4de1d9456654 676 Pfam PF02705 K+ potassium transporter 14 554 1.4E-167 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 DKL56_07125 5f67a74d9fbe4ab5c7eb4de1d9456654 676 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 650 27.02 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup DKL56_07740 d82ed8343edaf4beaafa6ab5f2d9c579 362 Pfam PF02698 DUF218 domain 178 328 2.1E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DKL56_04400 203d645d1b853693dbafb0f832fb9031 193 Gene3D G3DSA:1.20.144.10 107 192 5.0E-15 T 14-10-2018 DKL56_04400 203d645d1b853693dbafb0f832fb9031 193 SMART SM00014 80 186 7.8E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKL56_04400 203d645d1b853693dbafb0f832fb9031 193 SUPERFAMILY SSF48317 2 188 6.67E-24 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DKL56_04400 203d645d1b853693dbafb0f832fb9031 193 Pfam PF01569 PAP2 superfamily 80 186 7.4E-13 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKL56_03080 88280b446525713dd3bcfc7dbcb4f7d1 567 Gene3D G3DSA:3.20.20.300 12 364 5.5E-82 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DKL56_03080 88280b446525713dd3bcfc7dbcb4f7d1 567 Gene3D G3DSA:3.40.50.1700 374 559 4.9E-20 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DKL56_03080 88280b446525713dd3bcfc7dbcb4f7d1 567 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 28 346 4.7E-67 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DKL56_03080 88280b446525713dd3bcfc7dbcb4f7d1 567 SUPERFAMILY SSF51445 8 387 3.68E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_03740 576ad94fce552462ede51e8b5cf627e2 295 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 219 1.5E-65 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_03740 576ad94fce552462ede51e8b5cf627e2 295 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 225 279 4.2E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DKL56_03740 576ad94fce552462ede51e8b5cf627e2 295 PIRSF PIRSF006483 1 287 1.8E-88 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_03740 576ad94fce552462ede51e8b5cf627e2 295 Gene3D G3DSA:3.30.70.120 183 271 2.3E-21 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKL56_05590 03870a30e0075892d927ef872f07a408 76 Pfam PF10704 Protein of unknown function (DUF2508) 4 66 4.2E-18 T 14-10-2018 IPR019644 Protein of unknown function DUF2508 DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 Pfam PF12229 Putative peptidoglycan binding domain 127 246 1.4E-8 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 Gene3D G3DSA:2.40.440.10 273 402 4.8E-39 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 Pfam PF03734 L,D-transpeptidase catalytic domain 274 401 3.5E-17 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 SUPERFAMILY SSF141523 271 402 2.75E-29 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 SUPERFAMILY SSF143985 135 260 3.92E-22 T 14-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily DKL56_00740 e3bc5d6223e42005dc42797f7428a84f 403 Gene3D G3DSA:1.10.269.20 134 248 1.9E-10 T 14-10-2018 IPR038054 L,D-transpeptidase central domain-like superfamily DKL56_06510 eec994c8a905ddfcb87082fa6948b35e 279 SUPERFAMILY SSF47413 6 65 8.89E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_06510 eec994c8a905ddfcb87082fa6948b35e 279 SMART SM00530 10 64 5.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_06510 eec994c8a905ddfcb87082fa6948b35e 279 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 71 264 3.9E-11 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal DKL56_06510 eec994c8a905ddfcb87082fa6948b35e 279 Gene3D G3DSA:1.25.40.10 4 277 8.2E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_06510 eec994c8a905ddfcb87082fa6948b35e 279 Pfam PF12844 Helix-turn-helix domain 8 66 1.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Pfam PF00122 E1-E2 ATPase 117 309 3.4E-52 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Gene3D G3DSA:2.70.150.10 25 231 0.0 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 89 351 3.2E-40 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 616 730 3.4E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Gene3D G3DSA:3.40.50.1000 326 688 0.0 T 14-10-2018 IPR023214 HAD superfamily DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Gene3D G3DSA:1.20.1110.10 59 913 0.0 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 331 337 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 326 657 3.3E-23 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 675 700 5.5E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 615 631 5.5E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 643 659 5.5E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 496 514 5.5E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Pfam PF00689 Cation transporting ATPase, C-terminus 729 913 4.0E-51 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 552 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 662 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 329 343 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 167 181 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 573 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 667 679 3.8E-41 T 14-10-2018 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 SUPERFAMILY SSF81653 119 227 4.58E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 SMART SM00831 9 82 3.7E-18 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Pfam PF00690 Cation transporter/ATPase, N-terminus 11 77 1.4E-19 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 SUPERFAMILY SSF81665 11 916 8.11E-120 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 SUPERFAMILY SSF81660 336 545 2.18E-52 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 Gene3D G3DSA:3.40.1110.10 339 548 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DKL56_02515 bd7ce3a6c50a7e01f0dd79dddda3aadc 918 SUPERFAMILY SSF56784 327 749 5.23E-62 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 SMART SM00382 359 545 7.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 Gene3D G3DSA:3.40.50.300 328 574 1.8E-80 T 14-10-2018 DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 Gene3D G3DSA:1.20.1560.10 1 316 1.2E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 SUPERFAMILY SSF52540 326 569 1.39E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 Pfam PF00005 ABC transporter 350 499 4.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 SUPERFAMILY SSF90123 5 320 2.35E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00945 1c32db9fbfa5cac03a8acd7a8dd838e7 574 Pfam PF00664 ABC transporter transmembrane region 18 286 5.3E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_00940 8f441905ae4e049724d70548354fe824 260 Pfam PF06570 Protein of unknown function (DUF1129) 44 250 5.9E-59 T 14-10-2018 IPR009214 Protein of unknown function DUF1129 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 PIRSF PIRSF006488 1 79 2.9E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 SUPERFAMILY SSF116842 2 72 1.83E-18 T 14-10-2018 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 Gene3D G3DSA:1.10.287.1040 2 77 3.0E-20 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 Pfam PF02609 Exonuclease VII small subunit 8 58 6.6E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 1.1E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 16 48 1.0E-7 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DKL56_04810 747d6521ae55ac09b95ed35972e632e5 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 13.995 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DKL56_02505 4b614915f7d0752358e9d8d701f2428b 299 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 130 144 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_02505 4b614915f7d0752358e9d8d701f2428b 299 Pfam PF00849 RNA pseudouridylate synthase 87 237 8.0E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_02505 4b614915f7d0752358e9d8d701f2428b 299 SUPERFAMILY SSF55120 74 293 3.84E-54 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_02505 4b614915f7d0752358e9d8d701f2428b 299 Gene3D G3DSA:3.30.2350.10 70 282 3.2E-54 T 14-10-2018 DKL56_02475 eae49fcda21118148601b3ff4abc4685 241 PIRSF PIRSF029008 1 240 7.3E-59 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DKL56_02475 eae49fcda21118148601b3ff4abc4685 241 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 234 1.5E-45 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DKL56_02475 eae49fcda21118148601b3ff4abc4685 241 Gene3D G3DSA:3.30.70.1950 142 240 9.3E-13 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily DKL56_02115 1391c027cd970953894bdb3152b76316 253 Pfam PF07702 UTRA domain 99 235 1.0E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_02115 1391c027cd970953894bdb3152b76316 253 Gene3D G3DSA:1.10.10.10 11 79 1.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02115 1391c027cd970953894bdb3152b76316 253 SMART SM00866 97 236 7.5E-20 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_02115 1391c027cd970953894bdb3152b76316 253 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 3.9E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02115 1391c027cd970953894bdb3152b76316 253 SUPERFAMILY SSF46785 11 80 2.5E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02115 1391c027cd970953894bdb3152b76316 253 SMART SM00345 17 76 8.8E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02115 1391c027cd970953894bdb3152b76316 253 SUPERFAMILY SSF64288 65 242 2.98E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_02115 1391c027cd970953894bdb3152b76316 253 Gene3D G3DSA:3.40.1410.10 80 243 2.0E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_02115 1391c027cd970953894bdb3152b76316 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 6.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_02115 1391c027cd970953894bdb3152b76316 253 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 6.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01990 979232205f254a5d17f846e3777458aa 156 SUPERFAMILY SSF47240 5 145 1.39E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily DKL56_01990 979232205f254a5d17f846e3777458aa 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 125 143 6.9E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DKL56_01990 979232205f254a5d17f846e3777458aa 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 6.9E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DKL56_01990 979232205f254a5d17f846e3777458aa 156 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 6.9E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps DKL56_01990 979232205f254a5d17f846e3777458aa 156 PIRSF PIRSF005900 1 152 3.5E-43 T 14-10-2018 IPR002177 DNA-binding protein Dps DKL56_01990 979232205f254a5d17f846e3777458aa 156 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DKL56_01990 979232205f254a5d17f846e3777458aa 156 Gene3D G3DSA:1.20.1260.10 2 153 1.3E-49 T 14-10-2018 IPR012347 Ferritin-like DKL56_01990 979232205f254a5d17f846e3777458aa 156 Pfam PF00210 Ferritin-like domain 8 150 1.4E-32 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DKL56_03410 8fff23b816fe06ca0d5bc89d9bd77f20 269 Gene3D G3DSA:3.30.70.330 85 171 5.0E-27 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DKL56_03410 8fff23b816fe06ca0d5bc89d9bd77f20 269 SMART SM00363 186 243 2.6E-4 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03410 8fff23b816fe06ca0d5bc89d9bd77f20 269 Gene3D G3DSA:3.30.1370.160 9 82 4.0E-13 T 14-10-2018 DKL56_03410 8fff23b816fe06ca0d5bc89d9bd77f20 269 SUPERFAMILY SSF55174 42 246 7.95E-22 T 14-10-2018 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 Gene3D G3DSA:1.10.150.240 24 93 7.0E-46 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 197 5.9E-30 T 14-10-2018 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 1.2E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 Gene3D G3DSA:3.40.50.1000 13 208 7.0E-46 T 14-10-2018 IPR023214 HAD superfamily DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 SUPERFAMILY SSF56784 9 219 3.58E-41 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_03315 42d45c5b82ab1861104a5e906ba4c20d 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 197 2.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_02790 1674a62ee20674d9c8e800f9f7c756b2 173 SUPERFAMILY SSF54518 14 151 5.49E-5 T 14-10-2018 IPR025659 Tubby-like, C-terminal DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Gene3D G3DSA:1.10.1420.10 370 487 2.5E-99 T 14-10-2018 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SMART SM00534 593 780 1.3E-118 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SUPERFAMILY SSF55271 1 106 4.32E-39 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Gene3D G3DSA:1.10.1420.10 252 543 2.5E-99 T 14-10-2018 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 1 847 24.017 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 674 690 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 PIRSF PIRSF037677 1 230 6.7E-33 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 PIRSF PIRSF037677 219 833 3.9E-131 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SUPERFAMILY SSF52540 551 783 1.18E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Pfam PF05192 MutS domain III 254 543 4.0E-43 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Pfam PF00488 MutS domain V 597 783 3.8E-83 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Gene3D G3DSA:3.30.420.110 118 242 2.5E-15 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Pfam PF01624 MutS domain I 1 110 4.4E-42 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Gene3D G3DSA:3.40.1170.10 1 111 4.0E-44 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SUPERFAMILY SSF53150 109 261 4.58E-28 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Pfam PF05190 MutS family domain IV 411 502 2.3E-30 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SUPERFAMILY SSF48334 253 550 1.14E-90 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DKL56_05490 f707e66879a043df3a4994c09eed1791 859 SMART SM00533 266 576 1.4E-100 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Pfam PF05188 MutS domain II 119 234 3.8E-10 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 1 852 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DKL56_05490 f707e66879a043df3a4994c09eed1791 859 Gene3D G3DSA:3.40.50.300 553 858 1.3E-101 T 14-10-2018 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 Gene3D G3DSA:2.70.70.10 502 658 1.8E-59 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 SUPERFAMILY SSF55604 6 79 4.84E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 Gene3D G3DSA:3.30.1360.60 1 76 2.2E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 576 588 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 513 637 9.5E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 Pfam PF02378 Phosphotransferase system, EIIC 110 403 1.6E-32 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 658 9.5E-223 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 SUPERFAMILY SSF51261 507 656 1.92E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.7E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_07255 7ad9543eeca0cd54e947ab13a3d87426 659 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 514 634 1.1E-45 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_03885 009dbe9309126e96bb7e7fdb55c100f4 361 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 32 112 2.5E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DKL56_03885 009dbe9309126e96bb7e7fdb55c100f4 361 SUPERFAMILY SSF56349 179 346 1.15E-34 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DKL56_03885 009dbe9309126e96bb7e7fdb55c100f4 361 Gene3D G3DSA:1.10.150.130 13 121 7.8E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DKL56_03885 009dbe9309126e96bb7e7fdb55c100f4 361 Pfam PF00589 Phage integrase family 186 339 1.4E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DKL56_03885 009dbe9309126e96bb7e7fdb55c100f4 361 Gene3D G3DSA:1.10.443.10 169 359 2.7E-36 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 Pfam PF00664 ABC transporter transmembrane region 16 273 1.1E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 Gene3D G3DSA:1.20.1560.10 2 297 3.8E-18 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 Pfam PF00005 ABC transporter 338 480 3.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 SUPERFAMILY SSF52540 318 521 1.88E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 SUPERFAMILY SSF90123 7 291 3.66E-31 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 SMART SM00382 343 527 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00500 27e2818f1bd6d782f8952dadae43a0b7 532 Gene3D G3DSA:3.40.50.300 302 528 1.1E-46 T 14-10-2018 DKL56_07610 f1466e49e8ec85ba10fa9684a1e75861 138 Gene3D G3DSA:3.40.50.510 1 138 2.5E-31 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07610 f1466e49e8ec85ba10fa9684a1e75861 138 SUPERFAMILY SSF53062 1 129 5.89E-27 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_07610 f1466e49e8ec85ba10fa9684a1e75861 138 Pfam PF03610 PTS system fructose IIA component 4 102 7.2E-14 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 Gene3D G3DSA:4.10.520.10 1 91 2.0E-40 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.5E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.5E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.5E-21 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.4E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 SUPERFAMILY SSF47729 3 91 1.19E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DKL56_03725 a8a58464440326bb849f8334ac20b33e 91 SMART SM00411 2 91 2.4E-47 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DKL56_05820 d31cb0f7fd1638c60b60b3cbb41369c5 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 23 437 2.1E-92 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_05820 d31cb0f7fd1638c60b60b3cbb41369c5 443 Pfam PF02378 Phosphotransferase system, EIIC 37 365 4.2E-46 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_05820 d31cb0f7fd1638c60b60b3cbb41369c5 443 PIRSF PIRSF006351 11 443 3.2E-116 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_06605 83df5975dc717b3527ce25003ee6bfa2 81 PIRSF PIRSF037257 1 81 7.5E-33 T 14-10-2018 IPR009366 Protein Veg GO:0006355 DKL56_06605 83df5975dc717b3527ce25003ee6bfa2 81 Gene3D G3DSA:2.30.30.100 2 78 4.5E-24 T 14-10-2018 DKL56_06605 83df5975dc717b3527ce25003ee6bfa2 81 Pfam PF06257 Biofilm formation stimulator VEG 4 74 3.3E-28 T 14-10-2018 IPR009366 Protein Veg GO:0006355 DKL56_03110 612e6a413ba7f6c594b51e7e705e69d0 336 SUPERFAMILY SSF56601 5 323 4.07E-61 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_03110 612e6a413ba7f6c594b51e7e705e69d0 336 Gene3D G3DSA:3.40.710.10 3 331 1.0E-51 T 14-10-2018 DKL56_03110 612e6a413ba7f6c594b51e7e705e69d0 336 Pfam PF00144 Beta-lactamase 9 313 1.0E-38 T 14-10-2018 IPR001466 Beta-lactamase-related DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 SUPERFAMILY SSF55604 6 81 1.7E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 SUPERFAMILY SSF51261 459 609 2.44E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 Gene3D G3DSA:2.70.70.10 453 613 8.8E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 Gene3D G3DSA:3.30.1360.60 1 76 1.5E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 468 586 5.8E-37 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.2E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 466 587 7.6E-45 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 611 2.5E-204 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DKL56_06385 f9af2250ace516e5ac110d85d010830b 614 Pfam PF02378 Phosphotransferase system, EIIC 110 388 6.5E-31 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 Gene3D G3DSA:1.10.1670.10 21 198 2.7E-64 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 41 175 1.2E-23 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 Pfam PF00633 Helix-hairpin-helix motif 106 133 2.9E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 PIRSF PIRSF001435 7 202 3.1E-40 T 14-10-2018 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 Hamap MF_00942 Endonuclease III [nth]. 1 207 32.914 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 SMART SM00478 44 192 1.4E-58 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 Gene3D G3DSA:1.10.340.30 27 138 2.7E-64 T 14-10-2018 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 ProSitePatterns PS01155 Endonuclease III family signature. 108 137 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 SUPERFAMILY SSF48150 8 198 1.73E-61 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DKL56_03975 7ad3ce285ffa0959d025cc2db57fe7bb 209 TIGRFAM TIGR01083 nth: endonuclease III 11 198 2.8E-67 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DKL56_05900 d45522df33c13825a2e3b7933adb06dd 86 Pfam PF03083 Sugar efflux transporter for intercellular exchange 9 82 1.5E-7 T 14-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 DKL56_05900 d45522df33c13825a2e3b7933adb06dd 86 Gene3D G3DSA:1.20.1280.290 7 86 2.7E-9 T 14-10-2018 DKL56_06805 b9e75131451faeb27916e4a23b02fe5e 304 Gene3D G3DSA:3.90.1720.10 102 304 3.9E-48 T 14-10-2018 DKL56_06805 b9e75131451faeb27916e4a23b02fe5e 304 Pfam PF00877 NlpC/P60 family 199 292 1.1E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DKL56_06805 b9e75131451faeb27916e4a23b02fe5e 304 SUPERFAMILY SSF54001 183 295 4.9E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 SUPERFAMILY SSF55957 360 449 7.72E-24 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 SUPERFAMILY SSF53738 161 258 3.18E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 SUPERFAMILY SSF53738 260 369 4.32E-33 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Gene3D G3DSA:3.40.120.10 3 158 1.3E-51 T 14-10-2018 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 43.595 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 7.5E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 7.5E-8 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 138 3.1E-40 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Gene3D G3DSA:3.30.310.50 373 450 4.2E-27 T 14-10-2018 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 SUPERFAMILY SSF53738 3 182 2.35E-43 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 444 5.4E-16 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 371 1.2E-34 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 161 256 1.5E-17 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Gene3D G3DSA:3.40.120.10 259 342 2.2E-67 T 14-10-2018 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 3.5E-174 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DKL56_02835 2a11fa0c24a7e01bff53b9daf3ad0ca2 450 Gene3D G3DSA:3.40.120.10 176 365 2.2E-67 T 14-10-2018 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 411 2.6E-212 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 SUPERFAMILY SSF55031 213 324 8.37E-37 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 PIRSF PIRSF037215 1 413 5.6E-175 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 Pfam PF01546 Peptidase family M20/M25/M40 144 407 7.1E-11 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 Gene3D G3DSA:3.40.630.10 6 404 5.2E-156 T 14-10-2018 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 SUPERFAMILY SSF53187 4 407 7.04E-62 T 14-10-2018 DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 Pfam PF07687 Peptidase dimerisation domain 211 306 1.7E-6 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DKL56_04085 77d6d98793b92c592b7d5165b3b7857d 414 Gene3D G3DSA:3.30.70.360 213 323 5.2E-156 T 14-10-2018 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 215 1.8E-64 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 SUPERFAMILY SSF75217 1 238 2.8E-96 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 Gene3D G3DSA:1.10.1270.20 158 241 6.8E-35 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 227 5.0E-90 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 PIRSF PIRSF000386 1 241 1.5E-95 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 241 103.455 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DKL56_04615 9b2f454c1ceefd5d4aab592011f6232a 241 Gene3D G3DSA:3.40.1280.10 1 157 4.5E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKL56_00070 72abd33364c96af3b95021243678bd62 461 Pfam PF00772 DnaB-like helicase N terminal domain 10 109 8.1E-33 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DKL56_00070 72abd33364c96af3b95021243678bd62 461 SUPERFAMILY SSF48024 7 118 6.54E-34 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DKL56_00070 72abd33364c96af3b95021243678bd62 461 SUPERFAMILY SSF52540 182 444 2.03E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00070 72abd33364c96af3b95021243678bd62 461 Gene3D G3DSA:3.40.50.300 167 459 2.6E-105 T 14-10-2018 DKL56_00070 72abd33364c96af3b95021243678bd62 461 Pfam PF03796 DnaB-like helicase C terminal domain 184 452 1.1E-109 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DKL56_00070 72abd33364c96af3b95021243678bd62 461 SMART SM00382 201 389 1.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00070 72abd33364c96af3b95021243678bd62 461 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 454 3.3E-172 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DKL56_00070 72abd33364c96af3b95021243678bd62 461 Gene3D G3DSA:1.10.860.10 2 165 1.2E-54 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.8E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 SUPERFAMILY SSF64288 60 247 1.88E-36 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 1.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 Gene3D G3DSA:3.40.1410.10 100 246 2.1E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 SMART SM00866 103 242 2.8E-22 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 SUPERFAMILY SSF46785 6 81 4.93E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 Gene3D G3DSA:1.10.10.10 5 73 3.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 SMART SM00345 13 72 1.7E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_01360 2df548656e8366b0a7a967002f51d36f 257 Pfam PF07702 UTRA domain 105 240 4.1E-27 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_03875 05774767520a3c3630117159b7a67756 309 Pfam PF02833 DHHA2 domain 186 307 3.8E-18 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_03875 05774767520a3c3630117159b7a67756 309 Gene3D G3DSA:3.90.1640.10 1 188 5.8E-75 T 14-10-2018 DKL56_03875 05774767520a3c3630117159b7a67756 309 Pfam PF01368 DHH family 5 146 1.8E-27 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_03875 05774767520a3c3630117159b7a67756 309 SMART SM01131 181 308 1.1E-48 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_03875 05774767520a3c3630117159b7a67756 309 Gene3D G3DSA:3.10.310.20 190 309 3.0E-35 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_03875 05774767520a3c3630117159b7a67756 309 SUPERFAMILY SSF64182 3 308 5.36E-80 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 Gene3D G3DSA:2.40.30.10 270 363 8.9E-26 T 14-10-2018 DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 SUPERFAMILY SSF52402 1 232 2.12E-56 T 14-10-2018 DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 350 8.4E-129 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 Gene3D G3DSA:2.30.30.280 202 268 1.3E-25 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 351 37.005 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 Gene3D G3DSA:3.40.50.620 1 201 3.5E-92 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_03455 d83fcebc90abb2f283f32cba22d78380 363 Pfam PF03054 tRNA methyl transferase 1 350 9.8E-136 T 14-10-2018 DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 SUPERFAMILY SSF52540 5 242 9.74E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 SMART SM00382 29 219 2.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 SUPERFAMILY SSF54631 263 320 4.59E-5 T 14-10-2018 DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 Gene3D G3DSA:3.40.50.300 1 248 1.6E-70 T 14-10-2018 DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 Pfam PF00005 ABC transporter 21 169 1.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00960 2c456c543c5adb1705ef850f0f628d27 326 Gene3D G3DSA:3.10.580.10 268 325 9.8E-7 T 14-10-2018 DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 276 2.7E-116 T 14-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 Gene3D G3DSA:3.40.50.300 1 280 2.9E-82 T 14-10-2018 DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 SUPERFAMILY SSF52540 1 238 2.2E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 SMART SM00382 32 222 5.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06005 7006132528daa22f2e7a5f572fa45168 281 Pfam PF00005 ABC transporter 23 173 1.3E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 Pfam PF00121 Triosephosphate isomerase 5 247 1.8E-93 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 Gene3D G3DSA:3.20.20.70 1 250 8.0E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 59.083 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 2.9E-60 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_02745 50f6c8f321d81901491676f9f34acb14 251 SUPERFAMILY SSF51351 1 249 2.36E-91 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_06455 fce96d832451186bc13f7bc0a6729759 136 Pfam PF03610 PTS system fructose IIA component 4 116 4.5E-17 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_06455 fce96d832451186bc13f7bc0a6729759 136 Gene3D G3DSA:3.40.50.510 1 136 2.7E-27 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_06455 fce96d832451186bc13f7bc0a6729759 136 SUPERFAMILY SSF53062 1 116 1.07E-22 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_06900 4e91ebd7869146671d008be6b886ac4e 402 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 105 253 3.7E-45 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DKL56_06900 4e91ebd7869146671d008be6b886ac4e 402 Gene3D G3DSA:1.10.260.150 69 368 2.4E-88 T 14-10-2018 DKL56_06900 4e91ebd7869146671d008be6b886ac4e 402 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 106 252 7.7E-48 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DKL56_07575 0f3edaf9521ea34bf54af4196463f3a5 146 SMART SM00422 4 73 2.1E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_07575 0f3edaf9521ea34bf54af4196463f3a5 146 SUPERFAMILY SSF46955 4 119 7.69E-31 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_07575 0f3edaf9521ea34bf54af4196463f3a5 146 Gene3D G3DSA:1.10.1660.10 1 133 5.7E-36 T 14-10-2018 DKL56_07575 0f3edaf9521ea34bf54af4196463f3a5 146 Pfam PF13411 MerR HTH family regulatory protein 4 70 7.3E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DKL56_06265 f729968cd0658d79e2819ee2ce3c644d 80 SMART SM00363 1 61 1.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06265 f729968cd0658d79e2819ee2ce3c644d 80 PIRSF PIRSF038881 1 80 1.9E-32 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type DKL56_06265 f729968cd0658d79e2819ee2ce3c644d 80 Gene3D G3DSA:3.10.290.10 1 80 1.3E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_06265 f729968cd0658d79e2819ee2ce3c644d 80 Pfam PF01479 S4 domain 1 47 1.6E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06265 f729968cd0658d79e2819ee2ce3c644d 80 SUPERFAMILY SSF55174 1 75 1.01E-20 T 14-10-2018 DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 Pfam PF07702 UTRA domain 84 222 1.8E-9 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 SUPERFAMILY SSF64288 56 232 3.77E-14 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 SUPERFAMILY SSF46785 1 73 1.63E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 Gene3D G3DSA:1.10.10.10 1 76 1.1E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 8.0E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 Gene3D G3DSA:3.40.1410.10 80 226 3.9E-9 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DKL56_05235 ae54a05e530be45f0d4567c58e9f9238 238 SMART SM00345 7 66 5.4E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_05330 ec522eff75375639f7fa0f2ae05b8fdb 375 SUPERFAMILY SSF53383 14 367 7.43E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_05330 ec522eff75375639f7fa0f2ae05b8fdb 375 Pfam PF00155 Aminotransferase class I and II 18 362 2.5E-45 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DKL56_05330 ec522eff75375639f7fa0f2ae05b8fdb 375 Gene3D G3DSA:3.40.640.10 2 370 1.1E-74 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_05330 ec522eff75375639f7fa0f2ae05b8fdb 375 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 217 230 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DKL56_04940 10f31ff8f5d8ff06095183ae2872a283 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 27.892 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04940 10f31ff8f5d8ff06095183ae2872a283 211 SUPERFAMILY SSF53271 11 208 4.59E-49 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_04940 10f31ff8f5d8ff06095183ae2872a283 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 24 177 5.5E-39 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DKL56_04940 10f31ff8f5d8ff06095183ae2872a283 211 Pfam PF00156 Phosphoribosyl transferase domain 55 151 4.6E-12 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DKL56_04940 10f31ff8f5d8ff06095183ae2872a283 211 Gene3D G3DSA:3.40.50.2020 1 211 5.8E-60 T 14-10-2018 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 376 535 1.1E-46 T 14-10-2018 IPR001162 UvrC family homology region DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 SUPERFAMILY SSF82771 16 95 2.62E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Pfam PF14520 Helix-hairpin-helix domain 550 598 1.4E-6 T 14-10-2018 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 SUPERFAMILY SSF47781 515 591 4.77E-17 T 14-10-2018 IPR010994 RuvA domain 2-like DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Gene3D G3DSA:3.40.1440.10 3 100 2.0E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Gene3D G3DSA:1.10.150.20 539 600 7.5E-18 T 14-10-2018 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Pfam PF01541 GIY-YIG catalytic domain 17 91 3.6E-10 T 14-10-2018 IPR000305 GIY-YIG endonuclease DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Pfam PF02151 UvrB/uvrC motif 200 231 1.1E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 SUPERFAMILY SSF46600 184 236 2.62E-13 T 14-10-2018 IPR036876 UVR domain superfamily DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 582 3.3E-175 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Gene3D G3DSA:3.30.420.340 368 535 8.5E-47 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Gene3D G3DSA:4.10.860.10 195 234 4.2E-7 T 14-10-2018 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 599 26.039 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DKL56_03600 189c505f8e9a750e58dd613b21180dfb 600 SMART SM00465 16 96 2.2E-19 T 14-10-2018 IPR000305 GIY-YIG endonuclease DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PIRSF PIRSF000102 1 301 1.3E-87 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 1.8E-29 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 1.8E-29 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 1.8E-29 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 1.8E-29 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 PRINTS PR00086 L-lactate dehydrogenase signature 4 28 1.8E-29 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 SUPERFAMILY SSF51735 2 145 3.28E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 Gene3D G3DSA:3.40.50.720 1 145 1.2E-42 T 14-10-2018 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 173 179 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 SUPERFAMILY SSF56327 144 299 4.04E-44 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 4 143 9.5E-24 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 Gene3D G3DSA:3.90.110.10 147 301 2.0E-46 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_01055 6a2ef2332c2aa27f187bf7399506109f 301 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 299 1.6E-19 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DKL56_06175 00feda738a37578d742cfc6ac15e5a04 229 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 11 88 2.9E-22 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal DKL56_07155 2725c43dad18d2874798bd5d2e7f53ab 465 Pfam PF00149 Calcineurin-like phosphoesterase 133 391 5.8E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_07155 2725c43dad18d2874798bd5d2e7f53ab 465 SUPERFAMILY SSF56300 129 450 3.3E-27 T 14-10-2018 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 SUPERFAMILY SSF52317 148 350 6.3E-28 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_03915 93139d091b25274efdf993208b8aac8e 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 209 223 7.0E-9 T 14-10-2018 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 240 256 7.0E-9 T 14-10-2018 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 170 184 7.0E-9 T 14-10-2018 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 274 7.0E-9 T 14-10-2018 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 SMART SM01097 1 131 2.6E-54 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 2.3E-37 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 Gene3D G3DSA:3.40.50.880 163 351 1.1E-11 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_03915 93139d091b25274efdf993208b8aac8e 351 SUPERFAMILY SSF52021 1 143 1.44E-42 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_03915 93139d091b25274efdf993208b8aac8e 351 Pfam PF00117 Glutamine amidotransferase class-I 172 348 8.6E-11 T 14-10-2018 IPR017926 Glutamine amidotransferase DKL56_03915 93139d091b25274efdf993208b8aac8e 351 Gene3D G3DSA:3.50.30.20 1 146 2.2E-42 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-23 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 Gene3D G3DSA:1.10.10.10 1 86 7.6E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 Gene3D G3DSA:3.40.190.10 90 284 4.9E-19 T 14-10-2018 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 Pfam PF03466 LysR substrate binding domain 89 289 1.1E-17 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.0E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 Gene3D G3DSA:3.40.190.10 161 263 4.9E-19 T 14-10-2018 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 SUPERFAMILY SSF53850 88 290 3.72E-19 T 14-10-2018 DKL56_00250 b0c61ceb2fb19ac63179852815185841 295 SUPERFAMILY SSF46785 1 82 1.75E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02000 1493b8c317bbc5f9162419c2e7eaa9f2 306 SUPERFAMILY SSF53590 3 304 4.19E-82 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_02000 1493b8c317bbc5f9162419c2e7eaa9f2 306 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 295 5.1E-68 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DKL56_02000 1493b8c317bbc5f9162419c2e7eaa9f2 306 Gene3D G3DSA:3.90.245.10 1 305 2.4E-86 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 SUPERFAMILY SSF55874 4 213 1.83E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 136 2.0E-11 T 14-10-2018 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 2.6E-35 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Gene3D G3DSA:3.30.230.10 213 325 4.9E-28 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 SUPERFAMILY SSF118116 449 624 4.32E-27 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 623 23.186 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Gene3D G3DSA:3.30.1370.100 485 577 3.5E-32 T 14-10-2018 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 SMART SM00853 444 583 7.6E-19 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 5.4E-95 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Gene3D G3DSA:2.30.42.20 449 624 3.5E-32 T 14-10-2018 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 SUPERFAMILY SSF54211 190 325 4.17E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Gene3D G3DSA:3.30.565.10 3 212 2.2E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 Pfam PF08676 MutL C terminal dimerisation domain 443 575 7.5E-27 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site DKL56_05485 5205579dd22672ed65ed67b91edd0029 627 SMART SM01340 208 326 1.1E-44 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DKL56_05265 979187f74ab8d96fec5e2ee3e0418ef8 592 SUPERFAMILY SSF53850 52 587 1.49E-89 T 14-10-2018 DKL56_05265 979187f74ab8d96fec5e2ee3e0418ef8 592 PIRSF PIRSF002741 2 589 8.2E-61 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_05265 979187f74ab8d96fec5e2ee3e0418ef8 592 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 502 2.5E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_05265 979187f74ab8d96fec5e2ee3e0418ef8 592 Gene3D G3DSA:3.10.105.10 323 555 9.8E-69 T 14-10-2018 DKL56_05265 979187f74ab8d96fec5e2ee3e0418ef8 592 Gene3D G3DSA:3.40.190.10 27 322 1.1E-40 T 14-10-2018 DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 Gene3D G3DSA:3.40.190.10 22 319 2.7E-41 T 14-10-2018 DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 109 500 1.0E-60 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 SUPERFAMILY SSF53850 49 580 3.44E-89 T 14-10-2018 DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 Gene3D G3DSA:3.10.105.10 320 553 1.1E-71 T 14-10-2018 DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 PIRSF PIRSF002741 3 587 9.7E-57 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_04675 ebd2cfb6b23747ff300ae5e1c5ff223f 587 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 106 127 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DKL56_06125 1d2431be9a4c739dd555e9bdb569142f 117 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 6 115 29.681 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06125 1d2431be9a4c739dd555e9bdb569142f 117 SUPERFAMILY SSF54843 7 116 2.35E-42 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06125 1d2431be9a4c739dd555e9bdb569142f 117 Gene3D G3DSA:3.90.470.10 3 117 6.4E-49 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06125 1d2431be9a4c739dd555e9bdb569142f 117 Pfam PF00237 Ribosomal protein L22p/L17e 10 112 9.7E-36 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DKL56_06125 1d2431be9a4c739dd555e9bdb569142f 117 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 10 112 3.8E-47 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02750 4aafc5353f6eb480b3f54f6aae0dd6e7 139 Pfam PF03217 SLAP domain 84 134 0.0012 T 14-10-2018 IPR024968 SLAP domain DKL56_01315 c25571d14209b1b08d762d2657baba07 786 Gene3D G3DSA:1.50.10.10 5 786 1.2E-222 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DKL56_01315 c25571d14209b1b08d762d2657baba07 786 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 61 210 6.0E-35 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DKL56_01315 c25571d14209b1b08d762d2657baba07 786 SUPERFAMILY SSF49785 41 130 2.27E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DKL56_01315 c25571d14209b1b08d762d2657baba07 786 SUPERFAMILY SSF48208 337 756 1.28E-36 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DKL56_01315 c25571d14209b1b08d762d2657baba07 786 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 237 333 2.2E-20 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DKL56_01315 c25571d14209b1b08d762d2657baba07 786 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 338 695 2.2E-98 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DKL56_01315 c25571d14209b1b08d762d2657baba07 786 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 697 760 1.0E-6 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 303 409 3.5E-19 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 Gene3D G3DSA:3.40.190.10 137 236 1.3E-47 T 14-10-2018 DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 SMART SM00062 37 278 7.7E-30 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 SUPERFAMILY SSF53850 9 266 6.69E-43 T 14-10-2018 DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 Gene3D G3DSA:1.10.3720.10 295 517 5.3E-54 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 344 514 3.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 266 1.6E-34 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 SUPERFAMILY SSF161098 302 503 1.09E-41 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00595 00b1e1ee4e637f39ab032c2775e437c1 539 Gene3D G3DSA:3.40.190.10 36 263 1.3E-47 T 14-10-2018 DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 SUPERFAMILY SSF53613 1 301 2.03E-65 T 14-10-2018 IPR029056 Ribokinase-like DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 Pfam PF00294 pfkB family carbohydrate kinase 12 280 2.4E-48 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 PIRSF PIRSF000535 1 303 5.0E-84 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 Gene3D G3DSA:3.40.1190.20 1 304 3.9E-102 T 14-10-2018 IPR029056 Ribokinase-like DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.1E-106 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 2.9E-105 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DKL56_06955 ed236cbf5cd1327de7cd56093c7d2985 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DKL56_00850 8acd8d068d9af542259585b99ed4cd8a 201 SUPERFAMILY SSF53254 1 196 5.72E-47 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_00850 8acd8d068d9af542259585b99ed4cd8a 201 PIRSF PIRSF000709 1 183 8.9E-15 T 14-10-2018 DKL56_00850 8acd8d068d9af542259585b99ed4cd8a 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 195 4.3E-44 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_00850 8acd8d068d9af542259585b99ed4cd8a 201 Gene3D G3DSA:3.40.50.1240 1 201 5.6E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_00850 8acd8d068d9af542259585b99ed4cd8a 201 SMART SM00855 2 158 8.5E-16 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_01370 307ad2eb7efbe530b74321a47fea0a5a 142 Gene3D G3DSA:3.40.50.510 1 140 1.6E-31 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01370 307ad2eb7efbe530b74321a47fea0a5a 142 SUPERFAMILY SSF53062 1 126 4.32E-28 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01370 307ad2eb7efbe530b74321a47fea0a5a 142 Pfam PF03610 PTS system fructose IIA component 4 102 3.0E-14 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_05125 fa179cb62e0bec9f80901e2577ac22be 448 Pfam PF07261 Replication initiation and membrane attachment 328 392 9.2E-10 T 14-10-2018 IPR006343 DnaD domain DKL56_03775 be9534f689c92e93d108357f29500779 278 Pfam PF02481 DNA recombination-mediator protein A 68 272 2.6E-78 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DKL56_03775 be9534f689c92e93d108357f29500779 278 SUPERFAMILY SSF102405 76 268 8.97E-33 T 14-10-2018 DKL56_03775 be9534f689c92e93d108357f29500779 278 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 68 274 7.7E-71 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DKL56_03775 be9534f689c92e93d108357f29500779 278 Gene3D G3DSA:3.40.50.450 2 278 1.6E-89 T 14-10-2018 DKL56_03635 79702046f0d9342089e93548f193f597 515 Pfam PF02872 5'-nucleotidase, C-terminal domain 312 478 3.1E-25 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 366 389 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 248 268 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 222 245 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 187 204 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 1 19 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 PRINTS PR01607 Apyrase family signature 453 472 1.1E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 SUPERFAMILY SSF56300 2 310 8.63E-73 T 14-10-2018 DKL56_03635 79702046f0d9342089e93548f193f597 515 Pfam PF00149 Calcineurin-like phosphoesterase 9 239 2.7E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_03635 79702046f0d9342089e93548f193f597 515 SUPERFAMILY SSF55816 308 503 8.37E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_03635 79702046f0d9342089e93548f193f597 515 Gene3D G3DSA:3.60.21.10 2 310 3.6E-83 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DKL56_03635 79702046f0d9342089e93548f193f597 515 Gene3D G3DSA:3.90.780.10 312 514 4.1E-47 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 19 295 1.2E-70 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 SUPERFAMILY SSF56194 192 295 3.66E-35 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 196 294 1.9E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Gene3D G3DSA:3.90.78.10 212 299 1.9E-32 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Gene3D G3DSA:3.30.465.10 85 211 1.7E-43 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 299 92.703 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 SUPERFAMILY SSF56176 18 201 3.88E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Pfam PF01565 FAD binding domain 33 158 5.5E-25 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DKL56_02820 7a9e4a6181bb783f5c50f821c8700133 299 Gene3D G3DSA:3.30.43.10 5 84 6.6E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 134 3.5E-65 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 Pfam PF00164 Ribosomal protein S12/S23 38 134 7.1E-36 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 SUPERFAMILY SSF50249 2 134 4.63E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 Gene3D G3DSA:2.40.50.140 1 135 8.4E-60 T 14-10-2018 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PIRSF PIRSF002133 1 135 1.1E-47 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.2E-55 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06170 9837a3ab64b45b5c3f44b1ccff5c2c3a 135 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 135 37.702 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05070 0e96e242ad3be0027523eb4f8680c19b 371 Gene3D G3DSA:3.40.50.300 65 233 1.1E-45 T 14-10-2018 DKL56_05070 0e96e242ad3be0027523eb4f8680c19b 371 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 7 371 3.4E-137 T 14-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH DKL56_05070 0e96e242ad3be0027523eb4f8680c19b 371 SUPERFAMILY SSF52540 72 247 5.98E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05070 0e96e242ad3be0027523eb4f8680c19b 371 Pfam PF01926 50S ribosome-binding GTPase 171 241 8.9E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 Gene3D G3DSA:2.60.200.40 138 298 3.0E-36 T 14-10-2018 DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 SUPERFAMILY SSF111331 1 304 4.36E-73 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 302 9.6E-75 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 Gene3D G3DSA:3.40.50.10330 1 137 1.0E-41 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 SMART SM00046 4 137 4.5E-7 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DKL56_02200 90bccaef9ef89417b3d66e5231f132be 306 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 129 1.7E-33 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DKL56_03940 b325a4fabd99f085802ada534c5e8af9 408 Pfam PF00149 Calcineurin-like phosphoesterase 10 249 1.2E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_03940 b325a4fabd99f085802ada534c5e8af9 408 SUPERFAMILY SSF56300 10 305 3.3E-39 T 14-10-2018 DKL56_03940 b325a4fabd99f085802ada534c5e8af9 408 Gene3D G3DSA:3.60.21.10 9 310 2.6E-89 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DKL56_03940 b325a4fabd99f085802ada534c5e8af9 408 Gene3D G3DSA:1.10.246.180 311 374 2.6E-89 T 14-10-2018 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 Gene3D G3DSA:3.30.465.40 12 235 3.2E-64 T 14-10-2018 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 Pfam PF02913 FAD linked oxidases, C-terminal domain 218 463 5.3E-53 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 Pfam PF01565 FAD binding domain 44 181 5.7E-36 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 SUPERFAMILY SSF56176 15 219 7.48E-60 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 SUPERFAMILY SSF55103 225 464 2.13E-54 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 Gene3D G3DSA:3.30.70.2740 342 423 1.0E-13 T 14-10-2018 DKL56_04575 c89835293f93d01024d5ed0c6db7099f 466 Gene3D G3DSA:1.10.45.10 424 464 9.1E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DKL56_00120 cb371ba5efe2b911bf49840af906dbeb 163 Gene3D G3DSA:3.40.35.10 1 161 2.5E-49 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_00120 cb371ba5efe2b911bf49840af906dbeb 163 Pfam PF03830 PTS system sorbose subfamily IIB component 5 149 6.9E-47 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_00120 cb371ba5efe2b911bf49840af906dbeb 163 SUPERFAMILY SSF52728 3 159 7.72E-50 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_03505 d7ce86039ed6985ec502e773470c2a2b 74 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 67 2.0E-30 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DKL56_03505 d7ce86039ed6985ec502e773470c2a2b 74 Hamap MF_01553 UPF0356 protein . 1 70 21.474 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DKL56_03505 d7ce86039ed6985ec502e773470c2a2b 74 Gene3D G3DSA:3.10.20.730 1 59 4.1E-23 T 14-10-2018 DKL56_03505 d7ce86039ed6985ec502e773470c2a2b 74 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 1.9E-29 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DKL56_01625 1d0138ae783e7b55d08073ee873b1e6e 143 Pfam PF06103 Bacterial protein of unknown function (DUF948) 9 103 7.0E-25 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Gene3D G3DSA:3.80.10.10 152 264 2.5E-13 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Gene3D G3DSA:3.80.10.10 265 455 1.1E-24 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 252 352 8.6E-23 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 727 762 0.0023 T 14-10-2018 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Gene3D G3DSA:3.10.20.320 519 596 7.8E-12 T 14-10-2018 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Gene3D G3DSA:3.10.20.320 597 674 1.4E-25 T 14-10-2018 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 SUPERFAMILY SSF52058 155 439 3.74E-29 T 14-10-2018 DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 321 345 2.6E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 191 215 3.0E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 373 388 8.5E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 217 241 2.6E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 347 366 6.3E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 243 268 9.4E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 295 320 1.6E-12 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 270 293 1.4E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Pfam PF06458 MucBP domain 602 663 8.4E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Pfam PF06458 MucBP domain 524 587 5.1E-8 T 14-10-2018 IPR009459 MucBP domain DKL56_07330 492b37e2648cc38b485a3075749c60c1 765 Pfam PF00746 LPXTG cell wall anchor motif 722 763 5.3E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 Pfam PF13331 Domain of unknown function (DUF4093) 101 184 3.2E-23 T 14-10-2018 IPR025156 Ribonuclease M5, C-terminal domain DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 Pfam PF01751 Toprim domain 11 78 2.9E-5 T 14-10-2018 IPR006171 TOPRIM domain DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 SMART SM00493 9 83 1.0E-5 T 14-10-2018 IPR006171 TOPRIM domain DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 Hamap MF_01469 Ribonuclease M5 [rnmV]. 8 186 27.686 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 Gene3D G3DSA:3.40.1360.20 5 122 9.5E-22 T 14-10-2018 DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 SUPERFAMILY SSF110455 7 122 3.27E-30 T 14-10-2018 DKL56_06615 00fcc84ad6fa95dc44586b8692abb32c 190 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 9 184 1.3E-38 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 1.5E-6 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 1.5E-6 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 1.5E-6 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 1.5E-6 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 SUPERFAMILY SSF103473 8 461 1.31E-50 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 Gene3D G3DSA:1.20.1250.20 259 461 1.6E-19 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 Pfam PF07690 Major Facilitator Superfamily 24 408 4.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 Gene3D G3DSA:1.20.1250.20 6 254 5.0E-27 T 14-10-2018 DKL56_02875 be293ec22a650a2c754be7f655cb2dc5 465 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 423 4.0E-80 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DKL56_05535 d087d0c6f69c76dfd873e44b78ae8c85 134 Gene3D G3DSA:3.40.630.30 3 130 2.8E-33 T 14-10-2018 DKL56_05535 d087d0c6f69c76dfd873e44b78ae8c85 134 Pfam PF13673 Acetyltransferase (GNAT) domain 30 123 1.1E-13 T 14-10-2018 IPR000182 GNAT domain DKL56_05535 d087d0c6f69c76dfd873e44b78ae8c85 134 SUPERFAMILY SSF55729 10 127 2.86E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_06650 05d6b9951ed72e744239e881b669d404 201 Gene3D G3DSA:3.90.1680.10 1 198 1.1E-27 T 14-10-2018 IPR036590 SOS response associated peptidase-like DKL56_06650 05d6b9951ed72e744239e881b669d404 201 SUPERFAMILY SSF143081 24 182 1.96E-34 T 14-10-2018 IPR036590 SOS response associated peptidase-like DKL56_06650 05d6b9951ed72e744239e881b669d404 201 Pfam PF02586 SOS response associated peptidase (SRAP) 27 179 6.9E-23 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 SUPERFAMILY SSF46911 7 78 7.32E-30 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 7.8E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 7.8E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 7.8E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 7.8E-20 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 4.0E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 Gene3D G3DSA:4.10.640.10 1 79 3.1E-32 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 1 78 22.379 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 Pfam PF01084 Ribosomal protein S18 23 73 9.8E-29 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_00045 b21093d09a07cb8181aeac35f3816c0a 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 77 2.7E-30 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06925 f25e61fa7869010769e409a6ee0deedf 409 PIRSF PIRSF000138 1 372 9.9E-145 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 DKL56_06925 f25e61fa7869010769e409a6ee0deedf 409 Pfam PF01070 FMN-dependent dehydrogenase 29 365 9.5E-114 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 DKL56_06925 f25e61fa7869010769e409a6ee0deedf 409 Gene3D G3DSA:3.20.20.70 16 377 1.3E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_06925 f25e61fa7869010769e409a6ee0deedf 409 SUPERFAMILY SSF51395 19 362 3.82E-93 T 14-10-2018 DKL56_02700 ad836446d5b56682033862e33f931c5f 479 Gene3D G3DSA:1.20.1740.10 12 478 7.8E-23 T 14-10-2018 DKL56_02700 ad836446d5b56682033862e33f931c5f 479 PIRSF PIRSF006060 1 477 2.1E-44 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_02700 ad836446d5b56682033862e33f931c5f 479 Pfam PF13520 Amino acid permease 13 453 1.9E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_03075 51ff19a09378c1c5cae077165113721e 938 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 402 747 2.2E-118 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DKL56_03075 51ff19a09378c1c5cae077165113721e 938 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 300 397 1.3E-24 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DKL56_03075 51ff19a09378c1c5cae077165113721e 938 PIRSF PIRSF010631 3 841 4.5E-221 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase DKL56_03075 51ff19a09378c1c5cae077165113721e 938 Gene3D G3DSA:1.50.10.10 100 855 1.3E-253 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DKL56_03075 51ff19a09378c1c5cae077165113721e 938 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 128 268 1.5E-47 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DKL56_03075 51ff19a09378c1c5cae077165113721e 938 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 749 821 1.5E-15 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DKL56_03075 51ff19a09378c1c5cae077165113721e 938 SUPERFAMILY SSF48208 398 816 1.53E-41 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DKL56_07700 dab5c27407a404aa8351dfb6757c7654 412 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 9 404 8.1E-163 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB DKL56_07700 dab5c27407a404aa8351dfb6757c7654 412 PIRSF PIRSF016636 11 405 6.7E-78 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB DKL56_07700 dab5c27407a404aa8351dfb6757c7654 412 PIRSF PIRSF500216 7 409 1.1E-172 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB DKL56_07700 dab5c27407a404aa8351dfb6757c7654 412 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 80 395 3.8E-19 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT DKL56_00875 e554c2ca08be30547c3f0f0cfad33423 212 SUPERFAMILY SSF46689 2 70 5.13E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_00875 e554c2ca08be30547c3f0f0cfad33423 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 4.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_00875 e554c2ca08be30547c3f0f0cfad33423 212 Gene3D G3DSA:1.10.357.10 1 177 9.8E-18 T 14-10-2018 DKL56_00875 e554c2ca08be30547c3f0f0cfad33423 212 SUPERFAMILY SSF48498 79 162 9.34E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DKL56_00875 e554c2ca08be30547c3f0f0cfad33423 212 Pfam PF13305 WHG domain 84 160 9.7E-11 T 14-10-2018 IPR025996 WHG domain DKL56_06970 6073c4016f45c99fec09e0e5900f0344 150 SUPERFAMILY SSF46785 19 147 7.31E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_06970 6073c4016f45c99fec09e0e5900f0344 150 Gene3D G3DSA:1.10.10.10 3 148 7.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06970 6073c4016f45c99fec09e0e5900f0344 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DKL56_06970 6073c4016f45c99fec09e0e5900f0344 150 SMART SM00347 29 135 7.0E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_06970 6073c4016f45c99fec09e0e5900f0344 150 Pfam PF12802 MarR family 35 94 1.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DKL56_02555 2af08ead240e4b49f77cbc72cb0be3a5 186 PIRSF PIRSF000847 1 186 4.5E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DKL56_02555 2af08ead240e4b49f77cbc72cb0be3a5 186 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 181 2.8E-48 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DKL56_02555 2af08ead240e4b49f77cbc72cb0be3a5 186 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 58 80 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DKL56_02555 2af08ead240e4b49f77cbc72cb0be3a5 186 Gene3D G3DSA:1.20.120.1760 3 175 1.5E-12 T 14-10-2018 DKL56_02555 2af08ead240e4b49f77cbc72cb0be3a5 186 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 80 1.5E-17 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 Gene3D G3DSA:2.60.40.420 344 495 1.5E-36 T 14-10-2018 IPR008972 Cupredoxin DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 SUPERFAMILY SSF49503 49 177 1.98E-25 T 14-10-2018 IPR008972 Cupredoxin DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 SUPERFAMILY SSF49503 335 464 5.88E-28 T 14-10-2018 IPR008972 Cupredoxin DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 Gene3D G3DSA:2.60.40.420 11 172 4.7E-33 T 14-10-2018 IPR008972 Cupredoxin DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 Pfam PF07732 Multicopper oxidase 61 176 6.2E-18 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 Pfam PF07731 Multicopper oxidase 350 465 7.6E-26 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 SUPERFAMILY SSF49503 181 298 1.44E-24 T 14-10-2018 IPR008972 Cupredoxin DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 ProSitePatterns PS00080 Multicopper oxidases signature 2. 447 458 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 DKL56_06870 faf387e4e071f2990a22621d0382ca11 553 Gene3D G3DSA:2.60.40.420 174 343 7.9E-42 T 14-10-2018 IPR008972 Cupredoxin DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 2.0E-51 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.8E-54 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.063 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 SMART SM01374 1 122 1.3E-80 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 Gene3D G3DSA:2.40.150.20 1 122 5.7E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 SUPERFAMILY SSF50193 2 122 9.81E-48 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06100 8bb0d575842a4f233e70faa734d10bf9 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_02185 8b564d9457607cde06e584e93c751f4e 100 Gene3D G3DSA:1.10.20.60 1 93 3.8E-31 T 14-10-2018 DKL56_02185 8b564d9457607cde06e584e93c751f4e 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 22.956 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DKL56_02185 8b564d9457607cde06e584e93c751f4e 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 94 9.1E-28 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DKL56_02185 8b564d9457607cde06e584e93c751f4e 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 5.1E-20 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DKL56_02185 8b564d9457607cde06e584e93c751f4e 100 SUPERFAMILY SSF141000 3 93 1.83E-28 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DKL56_04105 1d4df43049aec595c0b0f3457f005460 135 SUPERFAMILY SSF55811 3 119 6.36E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DKL56_04105 1d4df43049aec595c0b0f3457f005460 135 Gene3D G3DSA:3.90.79.10 1 132 9.2E-32 T 14-10-2018 DKL56_04105 1d4df43049aec595c0b0f3457f005460 135 Pfam PF00293 NUDIX domain 5 115 4.4E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DKL56_03755 6a13c98c96732ddbda4e99d5a5c16a5c 286 SUPERFAMILY SSF82549 3 286 7.85E-74 T 14-10-2018 DKL56_03755 6a13c98c96732ddbda4e99d5a5c16a5c 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 284 2.4E-83 T 14-10-2018 IPR003797 DegV DKL56_03755 6a13c98c96732ddbda4e99d5a5c16a5c 286 Gene3D G3DSA:3.40.50.10170 1 155 3.0E-48 T 14-10-2018 DKL56_03755 6a13c98c96732ddbda4e99d5a5c16a5c 286 Gene3D G3DSA:3.30.1180.10 156 285 2.6E-24 T 14-10-2018 DKL56_03755 6a13c98c96732ddbda4e99d5a5c16a5c 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 285 5.3E-73 T 14-10-2018 IPR003797 DegV DKL56_04485 fba4162251a11c2c46fefc482122ddda 98 Gene3D G3DSA:3.30.1230.10 1 97 6.7E-32 T 14-10-2018 IPR035931 YlxR-like superfamily DKL56_04485 fba4162251a11c2c46fefc482122ddda 98 SUPERFAMILY SSF64376 4 94 1.26E-28 T 14-10-2018 IPR035931 YlxR-like superfamily DKL56_04485 fba4162251a11c2c46fefc482122ddda 98 Pfam PF04296 Protein of unknown function (DUF448) 9 81 6.3E-22 T 14-10-2018 IPR007393 Domain of unknown function DUF448 DKL56_01890 e5453b0e914a4d199c44cecf8955e412 192 PIRSF PIRSF037394 1 191 2.8E-55 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted DKL56_01890 e5453b0e914a4d199c44cecf8955e412 192 Pfam PF09819 ABC-type cobalt transport system, permease component 12 137 3.7E-30 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted DKL56_00210 15fd44e9490781c94a423721001d4c1f 225 Gene3D G3DSA:3.40.50.720 2 225 1.2E-47 T 14-10-2018 DKL56_00210 15fd44e9490781c94a423721001d4c1f 225 Pfam PF13460 NAD(P)H-binding 7 200 1.9E-41 T 14-10-2018 IPR016040 NAD(P)-binding domain DKL56_00210 15fd44e9490781c94a423721001d4c1f 225 SUPERFAMILY SSF51735 1 215 4.13E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_03880 df264f6c520e9dd4c35b062ff81ae39a 119 SMART SM00530 8 64 4.0E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_03880 df264f6c520e9dd4c35b062ff81ae39a 119 Gene3D G3DSA:1.10.260.40 1 70 3.8E-15 T 14-10-2018 DKL56_03880 df264f6c520e9dd4c35b062ff81ae39a 119 SUPERFAMILY SSF47413 3 65 1.66E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_03880 df264f6c520e9dd4c35b062ff81ae39a 119 Pfam PF13560 Helix-turn-helix domain 5 60 4.0E-11 T 14-10-2018 DKL56_06580 65a07b71a0cfb6fcd93761b48914b822 289 SUPERFAMILY SSF53067 1 284 3.4E-49 T 14-10-2018 DKL56_06580 65a07b71a0cfb6fcd93761b48914b822 289 Gene3D G3DSA:3.30.420.40 101 289 1.7E-41 T 14-10-2018 DKL56_06580 65a07b71a0cfb6fcd93761b48914b822 289 Pfam PF00480 ROK family 7 280 1.9E-42 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DKL56_06580 65a07b71a0cfb6fcd93761b48914b822 289 Gene3D G3DSA:3.30.420.40 1 100 1.5E-20 T 14-10-2018 DKL56_05925 f3eedb92fd80e1221a2a97c671b9d1e2 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 9.6E-18 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_05925 f3eedb92fd80e1221a2a97c671b9d1e2 105 SUPERFAMILY SSF52794 2 99 3.31E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_05925 f3eedb92fd80e1221a2a97c671b9d1e2 105 Gene3D G3DSA:3.40.50.2300 1 104 4.8E-34 T 14-10-2018 DKL56_05925 f3eedb92fd80e1221a2a97c671b9d1e2 105 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 6.7E-27 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 SUPERFAMILY SSF63520 170 277 1.44E-22 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 SUPERFAMILY SSF63520 61 165 1.18E-19 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Gene3D G3DSA:1.10.1790.10 62 166 2.0E-22 T 14-10-2018 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Gene3D G3DSA:2.30.24.10 1 55 3.0E-16 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Gene3D G3DSA:1.10.1790.10 168 280 2.7E-30 T 14-10-2018 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 SUPERFAMILY SSF50151 3 54 3.01E-14 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Pfam PF03123 CAT RNA binding domain 3 55 1.4E-16 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 SMART SM01061 1 58 5.7E-20 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Pfam PF00874 PRD domain 182 274 5.7E-15 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_07260 2d9211e249653a3cb231f4691f7a3022 296 Pfam PF00874 PRD domain 74 162 7.9E-15 T 14-10-2018 IPR011608 PRD domain GO:0006355 DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 Gene3D G3DSA:3.40.1190.20 1 308 2.5E-80 T 14-10-2018 IPR029056 Ribokinase-like DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 PIRSF PIRSF000535 1 306 5.6E-71 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 304 1.0E-96 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 304 3.9E-95 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 SUPERFAMILY SSF53613 2 292 4.21E-62 T 14-10-2018 IPR029056 Ribokinase-like DKL56_01440 f66ed66c0f1801152210baaabe34992f 310 Pfam PF00294 pfkB family carbohydrate kinase 11 292 2.4E-44 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 206 314 8.8E-23 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 7 315 49.927 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 Gene3D G3DSA:3.40.50.2020 150 291 1.6E-124 T 14-10-2018 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 7 123 6.3E-52 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 314 1.9E-120 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 SMART SM01400 7 123 2.2E-80 T 14-10-2018 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 Gene3D G3DSA:3.40.50.2020 10 302 1.6E-124 T 14-10-2018 DKL56_06530 d6b6c233da733410598666c0ec4cee2d 323 SUPERFAMILY SSF53271 72 302 1.55E-64 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_02785 4026ec164dd18a1a6e9319ce5947833b 409 SUPERFAMILY SSF103473 4 407 1.27E-28 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_02785 4026ec164dd18a1a6e9319ce5947833b 409 Gene3D G3DSA:1.20.1250.20 5 399 3.1E-18 T 14-10-2018 DKL56_02785 4026ec164dd18a1a6e9319ce5947833b 409 Pfam PF05977 Transmembrane secretion effector 17 396 1.1E-9 T 14-10-2018 IPR010290 Transmembrane secretion effector DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 Gene3D G3DSA:3.40.190.290 97 307 2.9E-13 T 14-10-2018 DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 Pfam PF03466 LysR substrate binding domain 94 298 2.0E-12 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 SUPERFAMILY SSF46785 8 89 1.41E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 SUPERFAMILY SSF53850 90 308 5.25E-15 T 14-10-2018 DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 Gene3D G3DSA:1.10.10.10 9 75 6.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03870 6fabe9d3afb587e470ac6fa22c0bef0f 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 7.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07380 4e6f4791ec33b42f009a097804ef5d35 152 SMART SM00850 52 148 7.6E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_07380 4e6f4791ec33b42f009a097804ef5d35 152 Gene3D G3DSA:2.40.50.1020 40 152 2.5E-12 T 14-10-2018 DKL56_07380 4e6f4791ec33b42f009a097804ef5d35 152 Pfam PF04397 LytTr DNA-binding domain 55 147 4.8E-19 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Gene3D G3DSA:3.10.20.320 483 560 4.1E-19 T 14-10-2018 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Gene3D G3DSA:3.10.20.320 564 648 2.2E-25 T 14-10-2018 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Pfam PF00746 LPXTG cell wall anchor motif 689 730 2.7E-4 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Gene3D G3DSA:3.80.10.10 164 275 3.4E-10 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Gene3D G3DSA:3.80.10.10 277 442 1.6E-15 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 693 728 0.0019 T 14-10-2018 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 312 332 4.8E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 234 258 5.4E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 260 285 5.3E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 194 207 2.1E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 286 310 3.1E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 364 388 3.3E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 208 232 9.7E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 338 361 2.6E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 390 411 9.6E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Pfam PF06458 MucBP domain 489 551 1.2E-12 T 14-10-2018 IPR009459 MucBP domain DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Pfam PF06458 MucBP domain 569 630 1.7E-15 T 14-10-2018 IPR009459 MucBP domain DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 SUPERFAMILY SSF52058 182 429 3.03E-22 T 14-10-2018 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 181 293 2.5E-25 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00175 3606c1e25763ed21e4063641e05e7e06 731 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 344 424 6.0E-14 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_02495 41af4ece9ac8d6890f92b7861ed5d8cd 209 Gene3D G3DSA:3.30.460.10 1 146 3.2E-52 T 14-10-2018 DKL56_02495 41af4ece9ac8d6890f92b7861ed5d8cd 209 SMART SM00954 44 165 6.2E-45 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DKL56_02495 41af4ece9ac8d6890f92b7861ed5d8cd 209 Pfam PF04607 Region found in RelA / SpoT proteins 44 163 4.8E-38 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DKL56_02495 41af4ece9ac8d6890f92b7861ed5d8cd 209 Gene3D G3DSA:1.10.287.860 148 209 5.5E-26 T 14-10-2018 DKL56_02495 41af4ece9ac8d6890f92b7861ed5d8cd 209 SUPERFAMILY SSF81301 3 198 4.58E-59 T 14-10-2018 DKL56_02315 69bf5757878bb1daaf83c44098858bbf 394 Gene3D G3DSA:2.30.40.10 11 391 3.8E-107 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_02315 69bf5757878bb1daaf83c44098858bbf 394 SUPERFAMILY SSF51556 59 355 5.11E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_02315 69bf5757878bb1daaf83c44098858bbf 394 Gene3D G3DSA:3.20.20.140 61 354 3.8E-107 T 14-10-2018 DKL56_02315 69bf5757878bb1daaf83c44098858bbf 394 SUPERFAMILY SSF51338 4 387 1.85E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_02315 69bf5757878bb1daaf83c44098858bbf 394 Pfam PF01979 Amidohydrolase family 55 382 3.0E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_06685 f9f0c619d5a560492764ee5b234794d1 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 302 4.1E-38 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DKL56_06685 f9f0c619d5a560492764ee5b234794d1 312 SUPERFAMILY SSF53590 1 308 2.09E-65 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_06685 f9f0c619d5a560492764ee5b234794d1 312 Gene3D G3DSA:3.90.245.10 1 311 7.9E-74 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DKL56_06515 d53c4af684915a0abccb70393cfe2835 455 Gene3D G3DSA:1.20.1250.30 244 418 2.7E-151 T 14-10-2018 DKL56_06515 d53c4af684915a0abccb70393cfe2835 455 SMART SM00471 58 196 4.3E-13 T 14-10-2018 IPR003607 HD/PDEase domain DKL56_06515 d53c4af684915a0abccb70393cfe2835 455 SUPERFAMILY SSF109604 8 424 5.86E-117 T 14-10-2018 DKL56_06515 d53c4af684915a0abccb70393cfe2835 455 Gene3D G3DSA:1.10.3210.10 14 407 2.7E-151 T 14-10-2018 DKL56_06515 d53c4af684915a0abccb70393cfe2835 455 Pfam PF01966 HD domain 62 138 1.0E-11 T 14-10-2018 IPR006674 HD domain DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 SUPERFAMILY SSF56425 274 429 1.95E-17 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 463 478 3.2E-6 T 14-10-2018 DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 16 38 3.2E-6 T 14-10-2018 DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 Gene3D G3DSA:3.90.700.10 256 421 2.9E-89 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 Gene3D G3DSA:3.50.50.60 15 483 2.9E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 SUPERFAMILY SSF51905 12 481 2.68E-37 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07435 892b7507ede4eb8481ace87f0208e2b8 490 Pfam PF00890 FAD binding domain 16 456 2.8E-44 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04730 c71b364192df2c5c271a4c9566d248bd 61 Gene3D G3DSA:2.30.170.40 18 61 7.2E-20 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04730 c71b364192df2c5c271a4c9566d248bd 61 SUPERFAMILY SSF143800 3 59 5.49E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04730 c71b364192df2c5c271a4c9566d248bd 61 Pfam PF00830 Ribosomal L28 family 3 57 1.2E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04730 c71b364192df2c5c271a4c9566d248bd 61 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 55 7.1E-22 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04730 c71b364192df2c5c271a4c9566d248bd 61 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 17.52 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Gene3D G3DSA:1.20.200.10 138 404 1.3E-101 T 14-10-2018 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 3.9E-7 T 14-10-2018 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 3.9E-7 T 14-10-2018 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 3.9E-7 T 14-10-2018 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 SUPERFAMILY SSF48557 6 458 4.86E-133 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Gene3D G3DSA:1.10.275.10 4 137 1.4E-39 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Gene3D G3DSA:1.10.40.30 405 463 2.2E-23 T 14-10-2018 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Pfam PF10415 Fumarase C C-terminus 407 459 6.4E-21 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Pfam PF00206 Lyase 15 340 7.2E-92 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 4.0E-30 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 4.0E-30 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 4.0E-30 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 4.0E-30 T 14-10-2018 IPR000362 Fumarate lyase family DKL56_04255 84b53c6bf352e4e60665c8463047f13e 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 6 460 69.971 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 Gene3D G3DSA:3.40.50.300 4 248 3.6E-79 T 14-10-2018 DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 SUPERFAMILY SSF52540 7 242 8.83E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 Pfam PF00005 ABC transporter 23 172 4.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 PIRSF PIRSF039085 4 248 1.6E-114 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 SMART SM00382 32 227 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06915 307a815bf04e4aaadc8cab0db116c3e2 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 408 430 5.7E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 209 228 6.0E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 259 278 2.9E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 230 252 6.9E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 282 302 2.6E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 434 459 6.7E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 382 406 5.6E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 187 203 6.3E-4 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 154 177 2.4E-6 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 304 329 9.0E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 SUPERFAMILY SSF52058 204 558 2.24E-22 T 14-10-2018 DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 288 389 1.3E-21 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 189 284 1.4E-23 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 433 545 3.2E-20 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 Gene3D G3DSA:3.80.10.10 401 632 3.9E-15 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_00555 82a02ea01b1daae0bdab3a0a9d641f03 645 Gene3D G3DSA:3.80.10.10 78 400 8.3E-15 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_06995 824d5ba79a5266d94551f668c31fcb0d 405 Pfam PF07690 Major Facilitator Superfamily 21 356 9.1E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_06995 824d5ba79a5266d94551f668c31fcb0d 405 Gene3D G3DSA:1.20.1250.20 7 199 3.4E-27 T 14-10-2018 DKL56_06995 824d5ba79a5266d94551f668c31fcb0d 405 Gene3D G3DSA:1.20.1250.20 210 399 1.7E-16 T 14-10-2018 DKL56_06995 824d5ba79a5266d94551f668c31fcb0d 405 SUPERFAMILY SSF103473 5 402 2.62E-54 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07545 5d7973198c6c97404b88d7dafab715ef 467 Pfam PF00324 Amino acid permease 19 453 8.7E-43 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DKL56_07545 5d7973198c6c97404b88d7dafab715ef 467 PIRSF PIRSF006060 1 467 4.4E-62 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_07545 5d7973198c6c97404b88d7dafab715ef 467 Gene3D G3DSA:1.20.1740.10 8 466 1.2E-68 T 14-10-2018 DKL56_01410 15363c89d7a3da08c736b78b6dce66c8 133 SUPERFAMILY SSF53062 5 127 3.01E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01410 15363c89d7a3da08c736b78b6dce66c8 133 Gene3D G3DSA:3.40.50.510 1 133 5.5E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01410 15363c89d7a3da08c736b78b6dce66c8 133 Pfam PF03610 PTS system fructose IIA component 6 107 2.6E-23 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_07020 7eed80fc5f732b857e8c54e21bfab538 106 Pfam PF02627 Carboxymuconolactone decarboxylase family 17 102 8.4E-22 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DKL56_07020 7eed80fc5f732b857e8c54e21bfab538 106 Gene3D G3DSA:1.20.1290.10 2 106 9.0E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_07020 7eed80fc5f732b857e8c54e21bfab538 106 SUPERFAMILY SSF69118 9 106 9.29E-30 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_06845 47d964844b2e4b3be3498152e1c73a85 511 Pfam PF13425 O-antigen ligase like membrane protein 2 499 1.6E-104 T 14-10-2018 DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 SMART SM01121 241 552 3.2E-177 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 SUPERFAMILY SSF101473 5 201 1.57E-45 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 Gene3D G3DSA:1.25.40.340 4 181 1.4E-12 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 Pfam PF13684 Dihydroxyacetone kinase family 242 552 9.6E-120 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 SMART SM01120 36 201 6.7E-68 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 Pfam PF02734 DAK2 domain 36 200 8.4E-41 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DKL56_04720 2ea24c60d8d63691cbecd2c054988875 552 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 552 2.1E-207 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 SMART SM00904 182 307 4.6E-47 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 Gene3D G3DSA:2.40.30.30 187 310 2.7E-34 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 306 4.3E-79 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 Pfam PF01687 Riboflavin kinase 183 306 1.1E-27 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 SUPERFAMILY SSF82114 173 308 2.4E-40 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 Pfam PF06574 FAD synthetase 17 165 1.5E-42 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 SUPERFAMILY SSF52374 17 174 4.79E-27 T 14-10-2018 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 PIRSF PIRSF004491 3 310 1.2E-92 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DKL56_04460 98c20b47ea4117f1f0aa239b85113f1a 310 Gene3D G3DSA:3.40.50.620 6 185 2.2E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_02235 7b84860fbb1246902ac757774f417ee0 342 Gene3D G3DSA:3.30.870.10 10 162 1.1E-17 T 14-10-2018 DKL56_02235 7b84860fbb1246902ac757774f417ee0 342 Pfam PF09565 NgoFVII restriction endonuclease 19 306 5.6E-80 T 14-10-2018 IPR019065 Restriction endonuclease, type II, NgoFVII DKL56_00655 5bc2d178f2f29a17c88c7dffa4a59a55 281 SUPERFAMILY SSF53448 5 254 4.01E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_00655 5bc2d178f2f29a17c88c7dffa4a59a55 281 Gene3D G3DSA:3.90.550.10 2 216 3.0E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_00655 5bc2d178f2f29a17c88c7dffa4a59a55 281 Pfam PF00535 Glycosyl transferase family 2 8 119 4.1E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 3 548 1.2E-258 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 SUPERFAMILY SSF51011 472 549 2.33E-18 T 14-10-2018 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 Gene3D G3DSA:3.90.400.10 102 171 7.9E-172 T 14-10-2018 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 Gene3D G3DSA:2.60.40.1180 473 550 2.6E-21 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 Pfam PF16657 Maltogenic Amylase, C-terminal domain 472 545 2.0E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 Gene3D G3DSA:3.20.20.80 3 464 7.9E-172 T 14-10-2018 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 SMART SM00642 10 413 1.1E-132 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 Pfam PF00128 Alpha amylase, catalytic domain 25 372 1.0E-106 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DKL56_00195 2b7fefaeb3b9b06fa1ba2d09c055aaff 550 SUPERFAMILY SSF51445 3 469 2.85E-140 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 SUPERFAMILY SSF75217 73 247 3.82E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 Pfam PF00588 SpoU rRNA Methylase family 102 241 6.0E-40 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 7 245 2.4E-77 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 Gene3D G3DSA:3.40.1280.10 81 248 5.2E-54 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 Gene3D G3DSA:3.30.1330.30 1 80 3.7E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 8 84 6.7E-18 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 SMART SM00967 8 85 4.6E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DKL56_05705 ab960d3eb1555beda3a9dbccd9bcf542 251 SUPERFAMILY SSF55315 3 81 2.0E-16 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_06085 1eb6e0d589383b206ba421916620174c 61 SUPERFAMILY SSF57716 3 61 2.35E-20 T 14-10-2018 DKL56_06085 1eb6e0d589383b206ba421916620174c 61 Pfam PF00253 Ribosomal protein S14p/S29e 13 60 2.3E-22 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06085 1eb6e0d589383b206ba421916620174c 61 Gene3D G3DSA:4.10.830.10 1 61 7.9E-27 T 14-10-2018 DKL56_06085 1eb6e0d589383b206ba421916620174c 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.184 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 Gene3D G3DSA:3.50.50.60 6 473 1.3E-89 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 SUPERFAMILY SSF56425 258 419 4.53E-18 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 Gene3D G3DSA:3.90.700.10 240 415 1.3E-89 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 450 1.3E-6 T 14-10-2018 DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.3E-6 T 14-10-2018 DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 Pfam PF00890 FAD binding domain 7 445 1.7E-44 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_06985 d1d972c8421da3c4cc62b43b25e6f01c 481 SUPERFAMILY SSF51905 3 479 2.68E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 SMART SM00845 326 473 3.1E-77 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 SUPERFAMILY SSF55931 6 294 5.17E-110 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 SUPERFAMILY SSF89095 298 401 1.83E-31 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 Gene3D G3DSA:1.10.150.380 298 411 5.5E-34 T 14-10-2018 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 Gene3D G3DSA:1.10.10.410 413 476 7.6E-27 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 473 1.3E-164 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 Pfam PF02934 GatB/GatE catalytic domain 6 287 5.0E-99 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 Pfam PF02637 GatB domain 326 473 1.9E-55 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DKL56_02195 c7bedeed63700795db7bf2f42c7fae7a 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 35.616 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 SUPERFAMILY SSF53901 168 385 2.26E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 163 4.6E-19 T 14-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 Gene3D G3DSA:3.40.47.10 173 319 2.3E-129 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 248 353 1.4E-11 T 14-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 SUPERFAMILY SSF53901 3 166 1.98E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 Gene3D G3DSA:3.40.47.10 3 349 2.3E-129 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DKL56_02395 183de8874e01dc8c9fe7436266d25de5 387 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 384 1.4E-131 T 14-10-2018 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922 DKL56_05215 6c171ac853e2efddff54be3a7d11492b 405 Gene3D G3DSA:3.60.21.10 1 248 2.3E-48 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DKL56_05215 6c171ac853e2efddff54be3a7d11492b 405 PIRSF PIRSF033091 1 403 1.3E-91 T 14-10-2018 IPR014576 Predicted phosphoesterase, YhaO type DKL56_05215 6c171ac853e2efddff54be3a7d11492b 405 SUPERFAMILY SSF56300 1 299 3.99E-50 T 14-10-2018 DKL56_05215 6c171ac853e2efddff54be3a7d11492b 405 Pfam PF00149 Calcineurin-like phosphoesterase 1 199 6.9E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_01355 07f7798e48896eeeeab4271893e329f8 339 Gene3D G3DSA:3.40.50.10490 167 327 3.6E-46 T 14-10-2018 DKL56_01355 07f7798e48896eeeeab4271893e329f8 339 PIRSF PIRSF009290 4 339 2.2E-85 T 14-10-2018 IPR024713 Fructosamine deglycase FrlB DKL56_01355 07f7798e48896eeeeab4271893e329f8 339 SUPERFAMILY SSF53697 23 339 9.52E-41 T 14-10-2018 DKL56_01355 07f7798e48896eeeeab4271893e329f8 339 Gene3D G3DSA:3.40.50.10490 5 164 1.5E-31 T 14-10-2018 DKL56_01355 07f7798e48896eeeeab4271893e329f8 339 Pfam PF01380 SIS domain 57 131 1.2E-7 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_03615 6a232fe7f42bafc355e1c2a863618eb3 313 SUPERFAMILY SSF56281 1 305 1.35E-76 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03615 6a232fe7f42bafc355e1c2a863618eb3 313 Gene3D G3DSA:3.60.15.10 1 304 1.4E-95 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_03615 6a232fe7f42bafc355e1c2a863618eb3 313 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 38.916 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DKL56_03615 6a232fe7f42bafc355e1c2a863618eb3 313 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 2.0E-111 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DKL56_03615 6a232fe7f42bafc355e1c2a863618eb3 313 Pfam PF00753 Metallo-beta-lactamase superfamily 35 135 9.4E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 299 1.6E-20 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PIRSF PIRSF000102 1 302 3.8E-88 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 143 5.6E-23 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 173 179 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 9.4E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 9.4E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 9.4E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 9.4E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 PRINTS PR00086 L-lactate dehydrogenase signature 4 28 9.4E-31 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 Gene3D G3DSA:3.40.50.720 1 145 1.1E-41 T 14-10-2018 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 SUPERFAMILY SSF51735 3 145 9.04E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 Gene3D G3DSA:3.90.110.10 147 302 1.5E-47 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_06330 6e1852b42a30c02ad9f60de34c152f59 302 SUPERFAMILY SSF56327 144 299 7.93E-45 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DKL56_06340 72a047980ae905fe03754c32699dc56e 435 Gene3D G3DSA:1.20.1740.10 1 435 9.5E-87 T 14-10-2018 DKL56_06340 72a047980ae905fe03754c32699dc56e 435 PIRSF PIRSF006060 1 435 2.6E-81 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_06340 72a047980ae905fe03754c32699dc56e 435 Pfam PF13520 Amino acid permease 5 406 1.0E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 SMART SM00382 28 215 9.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 Gene3D G3DSA:3.40.50.300 1 236 6.8E-65 T 14-10-2018 DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 Pfam PF00005 ABC transporter 20 164 3.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 PIRSF PIRSF039137 1 236 6.4E-106 T 14-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 DKL56_00790 7cfd5d0d28a72743c80613f95826e4be 236 SUPERFAMILY SSF52540 3 234 3.29E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Gene3D G3DSA:3.30.565.10 347 516 2.3E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Pfam PF00672 HAMP domain 225 275 5.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Pfam PF00512 His Kinase A (phospho-acceptor) domain 280 345 2.3E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Gene3D G3DSA:1.20.1480.50 186 284 1.2E-9 T 14-10-2018 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SMART SM00388 279 346 2.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 2.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 502 3.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SMART SM00304 224 278 1.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SMART SM00387 392 504 1.8E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SUPERFAMILY SSF47384 262 344 6.87E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SUPERFAMILY SSF158472 224 277 6.67E-8 T 14-10-2018 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 Gene3D G3DSA:1.10.287.130 285 346 2.6E-16 T 14-10-2018 DKL56_05035 32b79dba4fafc70726643ab2d0bc7e10 522 SUPERFAMILY SSF55874 336 505 8.64E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_00920 ff76f402077860ceacab0d45b97fd5dd 259 PIRSF PIRSF009320 94 259 1.6E-6 T 14-10-2018 DKL56_00920 ff76f402077860ceacab0d45b97fd5dd 259 PIRSF PIRSF009320 2 51 2.0E-16 T 14-10-2018 DKL56_00920 ff76f402077860ceacab0d45b97fd5dd 259 Pfam PF13614 AAA domain 3 177 3.5E-68 T 14-10-2018 IPR025669 AAA domain DKL56_00920 ff76f402077860ceacab0d45b97fd5dd 259 SUPERFAMILY SSF52540 3 254 1.9E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00920 ff76f402077860ceacab0d45b97fd5dd 259 Gene3D G3DSA:3.40.50.300 2 258 6.7E-83 T 14-10-2018 DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 SUPERFAMILY SSF49899 323 461 9.49E-7 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 335 461 4.1E-7 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 SMART SM00640 6 430 2.5E-10 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 6 286 4.0E-30 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 Gene3D G3DSA:2.60.120.560 330 465 3.0E-7 T 14-10-2018 DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 SUPERFAMILY SSF75005 4 299 6.85E-48 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DKL56_06450 7829d0bb2682ec0baf067fee03b6b9ae 469 Gene3D G3DSA:2.115.10.20 12 302 8.2E-44 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 3 249 36.317 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 6 244 4.2E-65 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 Gene3D G3DSA:3.30.70.660 109 247 1.3E-41 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 Pfam PF01416 tRNA pseudouridine synthase 10 107 1.7E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 Pfam PF01416 tRNA pseudouridine synthase 146 250 3.9E-29 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 Gene3D G3DSA:3.30.70.580 1 108 1.0E-33 T 14-10-2018 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 SUPERFAMILY SSF55120 3 256 9.78E-82 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05995 c45391c6897b723ea6d20f99288a697d 261 PIRSF PIRSF001430 2 260 3.5E-79 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03630 7644948cd672d00d933d8c45ea537dce 63 SUPERFAMILY SSF57829 1 54 5.98E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DKL56_03630 7644948cd672d00d933d8c45ea537dce 63 Pfam PF01783 Ribosomal L32p protein family 2 55 2.5E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03630 7644948cd672d00d933d8c45ea537dce 63 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 5.3E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03630 7644948cd672d00d933d8c45ea537dce 63 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.572 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 253 1.4E-87 T 14-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 Gene3D G3DSA:3.40.50.1000 7 244 4.7E-75 T 14-10-2018 IPR023214 HAD superfamily DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 PIRSF PIRSF000915 1 256 1.8E-53 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 7 233 3.6E-36 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 Pfam PF13242 HAD-hyrolase-like 184 255 6.3E-17 T 14-10-2018 DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 105 3.4E-17 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 Gene3D G3DSA:3.40.50.1000 87 184 4.7E-75 T 14-10-2018 IPR023214 HAD superfamily DKL56_01665 6afc4a9c392c8cc7e6346d27ed56e3c2 258 SUPERFAMILY SSF56784 3 254 4.34E-59 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 SUPERFAMILY SSF51445 5 478 8.58E-160 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 309 323 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 7.6E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 Gene3D G3DSA:3.20.20.80 1 480 2.2E-152 T 14-10-2018 DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_07250 d9d76f3074452d5b2259edcaebdb2ace 481 Pfam PF00232 Glycosyl hydrolase family 1 3 477 7.2E-133 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 Pfam PF01432 Peptidase family M3 203 583 2.6E-70 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 6 594 1.6E-181 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 Pfam PF08439 Oligopeptidase F 114 181 3.9E-23 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 SUPERFAMILY SSF55486 55 597 6.06E-121 T 14-10-2018 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 Gene3D G3DSA:1.10.287.830 180 226 5.1E-15 T 14-10-2018 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 Gene3D G3DSA:1.10.1370.20 227 600 3.1E-122 T 14-10-2018 DKL56_06905 2b15d62607f55ecba2fae5044df89f4f 601 Gene3D G3DSA:1.20.140.70 23 178 8.4E-47 T 14-10-2018 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 Pfam PF03217 SLAP domain 325 377 6.9E-16 T 14-10-2018 IPR024968 SLAP domain DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 Pfam PF03217 SLAP domain 266 316 7.0E-15 T 14-10-2018 IPR024968 SLAP domain DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 SMART SM00644 66 207 1.1E-28 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 76 206 1.2E-13 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 SUPERFAMILY SSF55846 72 227 9.16E-32 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 Gene3D G3DSA:3.40.80.10 17 241 9.6E-64 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 PRINTS PR01729 Lactobacillus surface layer protein signature 346 363 3.7E-5 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 PRINTS PR01729 Lactobacillus surface layer protein signature 320 339 3.7E-5 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_07075 7b6c680569a94b4c63366291a5dc2d06 379 PRINTS PR01729 Lactobacillus surface layer protein signature 32 47 3.7E-5 T 14-10-2018 IPR004903 Lactobacillus surface layer protein GO:0005199|GO:0009274|GO:0030115 DKL56_05175 b91a17d2e758da8df054125d9aab6b88 219 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 217 27.198 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DKL56_05175 b91a17d2e758da8df054125d9aab6b88 219 Pfam PF02390 Putative methyltransferase 41 211 2.8E-44 T 14-10-2018 DKL56_05175 b91a17d2e758da8df054125d9aab6b88 219 Gene3D G3DSA:3.40.50.150 1 216 6.6E-60 T 14-10-2018 DKL56_05175 b91a17d2e758da8df054125d9aab6b88 219 SUPERFAMILY SSF53335 40 212 9.09E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_05175 b91a17d2e758da8df054125d9aab6b88 219 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 31 214 8.0E-48 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DKL56_07335 b703007a69692c8d36f948d4a0589787 168 Gene3D G3DSA:3.40.220.10 1 168 1.0E-71 T 14-10-2018 DKL56_07335 b703007a69692c8d36f948d4a0589787 168 SMART SM00506 3 131 5.9E-43 T 14-10-2018 IPR002589 Macro domain DKL56_07335 b703007a69692c8d36f948d4a0589787 168 Pfam PF01661 Macro domain 20 131 2.5E-41 T 14-10-2018 IPR002589 Macro domain DKL56_07335 b703007a69692c8d36f948d4a0589787 168 SUPERFAMILY SSF52949 3 167 5.38E-61 T 14-10-2018 DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 Pfam PF03176 MMPL family 42 364 4.1E-58 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 Pfam PF03176 MMPL family 618 965 1.2E-33 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 SUPERFAMILY SSF82866 141 340 2.88E-33 T 14-10-2018 DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 510 536 2.3E-6 T 14-10-2018 IPR023908 xxxLxxG heptad repeat DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 629 655 1.6E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 530 556 2.0E-6 T 14-10-2018 IPR023908 xxxLxxG heptad repeat DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 677 704 3.6E-7 T 14-10-2018 IPR023908 xxxLxxG heptad repeat DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 502 529 8.5E-7 T 14-10-2018 IPR023908 xxxLxxG heptad repeat DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 Gene3D G3DSA:1.20.1640.10 139 343 1.1E-11 T 14-10-2018 DKL56_01185 757689ca1054fb8efb4871ec57ceb76b 982 SUPERFAMILY SSF82866 757 973 1.83E-27 T 14-10-2018 DKL56_01165 9181b51d34d340b46c0d0923c064dc56 436 Gene3D G3DSA:3.40.190.10 42 436 1.4E-66 T 14-10-2018 DKL56_01165 9181b51d34d340b46c0d0923c064dc56 436 Pfam PF13416 Bacterial extracellular solute-binding protein 64 372 1.2E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DKL56_01165 9181b51d34d340b46c0d0923c064dc56 436 SUPERFAMILY SSF53850 46 412 2.95E-63 T 14-10-2018 DKL56_00375 d8c640557d71b338b447ea26fcb1c1e9 274 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 274 147.034 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DKL56_00375 d8c640557d71b338b447ea26fcb1c1e9 274 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 7 266 1.4E-67 T 14-10-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DKL56_00375 d8c640557d71b338b447ea26fcb1c1e9 274 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 4 266 9.9E-95 T 14-10-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 DKL56_04885 65097ff30f627f0cc23f677873931b56 118 Pfam PF03960 ArsC family 56 115 5.9E-16 T 14-10-2018 IPR006660 Arsenate reductase-like DKL56_04885 65097ff30f627f0cc23f677873931b56 118 Gene3D G3DSA:3.40.30.10 1 118 4.6E-41 T 14-10-2018 DKL56_04885 65097ff30f627f0cc23f677873931b56 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 117 3.0E-31 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DKL56_04885 65097ff30f627f0cc23f677873931b56 118 SUPERFAMILY SSF52833 1 117 2.24E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 170 182 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 SUPERFAMILY SSF51412 6 318 6.15E-90 T 14-10-2018 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 SMART SM01240 8 330 3.4E-111 T 14-10-2018 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 10 329 3.3E-171 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 Hamap MF_01511 GMP reductase [guaC]. 7 330 64.413 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 Gene3D G3DSA:3.20.20.70 4 330 3.6E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 314 1.6E-69 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DKL56_07395 cc73ebf398ee67449a8a68145d4f8568 330 PIRSF PIRSF036500 5 330 2.7E-181 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DKL56_02290 8e98fb6577137b36e7bc0697f3d6185e 403 Pfam PF07690 Major Facilitator Superfamily 24 297 6.9E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_02290 8e98fb6577137b36e7bc0697f3d6185e 403 Gene3D G3DSA:1.20.1250.20 211 403 4.8E-11 T 14-10-2018 DKL56_02290 8e98fb6577137b36e7bc0697f3d6185e 403 SUPERFAMILY SSF103473 26 399 1.22E-32 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_02290 8e98fb6577137b36e7bc0697f3d6185e 403 Gene3D G3DSA:1.20.1250.20 6 197 5.7E-16 T 14-10-2018 DKL56_05500 e5182e72b8cd9d1bae487e6d21c69585 307 Pfam PF06166 Protein of unknown function (DUF979) 12 307 4.5E-116 T 14-10-2018 IPR009323 Protein of unknown function DUF979 DKL56_04955 445f307bae14de82c713060a35f2d882 416 Gene3D G3DSA:3.90.1150.60 14 409 6.7E-163 T 14-10-2018 DKL56_04955 445f307bae14de82c713060a35f2d882 416 SUPERFAMILY SSF53383 26 351 1.79E-33 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_04955 445f307bae14de82c713060a35f2d882 416 Pfam PF06838 Methionine gamma-lyase 9 412 8.2E-173 T 14-10-2018 IPR009651 Putative methionine gamma-lyase DKL56_04955 445f307bae14de82c713060a35f2d882 416 Gene3D G3DSA:3.40.640.10 55 269 6.7E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_02365 03965981398c660a02fa0c7e30072f6a 148 Gene3D G3DSA:3.40.50.360 1 147 6.1E-35 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_02365 03965981398c660a02fa0c7e30072f6a 148 SUPERFAMILY SSF52218 1 144 7.55E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_02365 03965981398c660a02fa0c7e30072f6a 148 Pfam PF00258 Flavodoxin 5 130 8.1E-23 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 Pfam PF00664 ABC transporter transmembrane region 19 291 1.1E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 SUPERFAMILY SSF52540 332 576 5.33E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 Gene3D G3DSA:3.40.50.300 329 582 3.5E-82 T 14-10-2018 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 Pfam PF00005 ABC transporter 357 505 3.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 SMART SM00382 366 558 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 SUPERFAMILY SSF90123 7 320 5.23E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_04585 7753aece72597416c638a0c5125b1b3a 584 Gene3D G3DSA:1.20.1560.10 3 319 9.5E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DKL56_05030 126429d9bf7202e8715e749b50063553 323 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 68 257 3.8E-39 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05030 126429d9bf7202e8715e749b50063553 323 Pfam PF02096 60Kd inner membrane protein 69 256 9.0E-36 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 Gene3D G3DSA:1.10.1200.10 1 80 7.5E-28 T 14-10-2018 IPR036736 ACP-like superfamily DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 Pfam PF00550 Phosphopantetheine attachment site 9 75 1.8E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 78 7.0E-15 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 79 4.1E-27 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 SUPERFAMILY SSF47336 1 79 4.45E-22 T 14-10-2018 IPR036736 ACP-like superfamily DKL56_04705 44e098d2fb099591185fc4b940e3b1cc 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 20.339 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DKL56_07035 bfa926384763d5e4b7baa359defcfbff 218 Gene3D G3DSA:1.10.357.10 7 218 1.4E-30 T 14-10-2018 DKL56_07035 bfa926384763d5e4b7baa359defcfbff 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 2.4E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_07035 bfa926384763d5e4b7baa359defcfbff 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_07035 bfa926384763d5e4b7baa359defcfbff 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_07035 bfa926384763d5e4b7baa359defcfbff 218 SUPERFAMILY SSF46689 8 72 4.66E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_05700 3082f1823b7074eda77243d82c26dcf4 192 Pfam PF04542 Sigma-70 region 2 32 94 1.2E-5 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DKL56_05700 3082f1823b7074eda77243d82c26dcf4 192 SUPERFAMILY SSF88946 9 101 7.38E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DKL56_05700 3082f1823b7074eda77243d82c26dcf4 192 Gene3D G3DSA:1.10.1740.10 3 121 2.7E-6 T 14-10-2018 DKL56_04850 4358b77d6608d31e9de81439f4509d48 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.079 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04850 4358b77d6608d31e9de81439f4509d48 104 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04850 4358b77d6608d31e9de81439f4509d48 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 3.7E-41 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04850 4358b77d6608d31e9de81439f4509d48 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.2E-40 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04850 4358b77d6608d31e9de81439f4509d48 104 SUPERFAMILY SSF141091 1 102 3.66E-38 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 Gene3D G3DSA:3.20.20.70 97 381 5.4E-131 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 187 199 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 Gene3D G3DSA:3.20.20.70 1 96 1.2E-34 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 SUPERFAMILY SSF51412 6 379 1.09E-139 T 14-10-2018 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 368 6.7E-155 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DKL56_02885 7006a2cc1f3655d57d34c27838b7863a 381 SMART SM01240 11 368 2.8E-234 T 14-10-2018 DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 Pfam PF03471 Transporter associated domain 199 277 3.9E-20 T 14-10-2018 IPR005170 Transporter-associated domain DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 Gene3D G3DSA:3.10.580.10 41 191 2.1E-46 T 14-10-2018 DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 SMART SM01091 198 279 6.1E-21 T 14-10-2018 IPR005170 Transporter-associated domain DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 SUPERFAMILY SSF56176 198 287 1.39E-18 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 SUPERFAMILY SSF54631 50 186 5.81E-31 T 14-10-2018 DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 Gene3D G3DSA:3.30.465.10 192 281 1.3E-26 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 Pfam PF00571 CBS domain 131 183 1.0E-7 T 14-10-2018 IPR000644 CBS domain DKL56_02435 58d0c7fa0a842c0c749727017796c699 289 Pfam PF00571 CBS domain 62 118 3.8E-5 T 14-10-2018 IPR000644 CBS domain DKL56_07780 949ece22ba8ce40e2deaf119b3abc7b9 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 205 9.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_07780 949ece22ba8ce40e2deaf119b3abc7b9 213 Gene3D G3DSA:1.10.3720.10 1 211 8.6E-51 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07780 949ece22ba8ce40e2deaf119b3abc7b9 213 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 105 2.4E-27 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_07780 949ece22ba8ce40e2deaf119b3abc7b9 213 SUPERFAMILY SSF161098 9 195 1.57E-40 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 Gene3D G3DSA:3.30.63.10 37 96 2.8E-63 T 14-10-2018 DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 184 6.9E-70 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 Pfam PF00625 Guanylate kinase 7 185 1.5E-49 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.412 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 SMART SM00072 4 187 1.2E-62 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 Gene3D G3DSA:3.40.50.300 9 183 2.8E-63 T 14-10-2018 DKL56_04780 a297051ea643bbc2a68bf8ca71008515 204 SUPERFAMILY SSF52540 4 189 5.84E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05240 bea975607984e7de00b593a56a6279b1 414 Pfam PF01120 Alpha-L-fucosidase 9 305 1.1E-67 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 Gene3D G3DSA:3.20.20.80 2 316 4.2E-84 T 14-10-2018 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 PIRSF PIRSF001092 2 388 4.5E-81 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 SMART SM00812 1 354 4.0E-62 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 PRINTS PR00741 Glycosyl hydrolase family 29 signature 292 314 1.4E-15 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 PRINTS PR00741 Glycosyl hydrolase family 29 signature 259 280 1.4E-15 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 PRINTS PR00741 Glycosyl hydrolase family 29 signature 119 138 1.4E-15 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 PRINTS PR00741 Glycosyl hydrolase family 29 signature 73 89 1.4E-15 T 14-10-2018 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DKL56_05240 bea975607984e7de00b593a56a6279b1 414 SUPERFAMILY SSF51445 7 309 6.16E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_02905 25eea423f33ce48408e92f01b4079b54 233 Gene3D G3DSA:3.40.50.300 2 230 7.0E-64 T 14-10-2018 DKL56_02905 25eea423f33ce48408e92f01b4079b54 233 Pfam PF00005 ABC transporter 24 166 4.3E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02905 25eea423f33ce48408e92f01b4079b54 233 SMART SM00382 32 215 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02905 25eea423f33ce48408e92f01b4079b54 233 SUPERFAMILY SSF52540 4 222 9.42E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02905 25eea423f33ce48408e92f01b4079b54 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_05555 8f64e2097001cbaee5fb2c9033b61959 172 Gene3D G3DSA:1.10.1760.20 4 172 1.2E-49 T 14-10-2018 DKL56_05555 8f64e2097001cbaee5fb2c9033b61959 172 Pfam PF12822 ECF transporter, substrate-specific component 13 161 5.0E-12 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DKL56_05555 8f64e2097001cbaee5fb2c9033b61959 172 TIGRFAM TIGR04518 ECF_S_folT_fam: ECF transporter S component, folate family 9 165 3.6E-34 T 14-10-2018 IPR030949 ECF transporter S component, folate family DKL56_02145 5129d13a219c749ce24beceb94efac4f 157 Pfam PF10263 SprT-like family 14 106 5.6E-10 T 14-10-2018 IPR006640 SprT-like DKL56_02145 5129d13a219c749ce24beceb94efac4f 157 SMART SM00731 11 155 2.1E-39 T 14-10-2018 IPR006640 SprT-like DKL56_02145 5129d13a219c749ce24beceb94efac4f 157 Pfam PF17283 SprT-like zinc ribbon domain 119 154 1.3E-6 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 SUPERFAMILY SSF46785 1 84 8.55E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 SUPERFAMILY SSF53850 118 294 1.09E-9 T 14-10-2018 DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 Gene3D G3DSA:1.10.10.10 1 90 2.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 Gene3D G3DSA:3.40.190.10 119 288 8.9E-7 T 14-10-2018 DKL56_07455 b06aedb6e442ce0d1c1c3af1ce7ad76e 305 Gene3D G3DSA:3.40.190.10 167 270 8.9E-7 T 14-10-2018 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 Pfam PF00673 ribosomal L5P family C-terminus 86 178 8.9E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 PIRSF PIRSF002161 1 180 1.5E-66 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 SUPERFAMILY SSF55282 5 179 1.48E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.434 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 Gene3D G3DSA:3.30.1440.10 2 180 2.6E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06090 243bc9b3db755023ee534917b3b30327 180 Pfam PF00281 Ribosomal protein L5 25 81 5.3E-28 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_07805 3045a353e58fcdee0a4864bce371bf36 484 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 30 477 9.6E-110 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DKL56_07805 3045a353e58fcdee0a4864bce371bf36 484 Pfam PF00939 Sodium:sulfate symporter transmembrane region 13 484 4.5E-124 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DKL56_07805 3045a353e58fcdee0a4864bce371bf36 484 PIRSF PIRSF002457 1 484 8.7E-123 T 14-10-2018 IPR030676 Citrate carrier CitT-related DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 20 208 1.8E-43 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 Pfam PF10502 Signal peptidase, peptidase S26 110 201 2.9E-7 T 14-10-2018 IPR019533 Peptidase S26 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 SUPERFAMILY SSF51306 35 213 2.09E-46 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 ProSitePatterns PS00501 Signal peptidases I serine active site. 44 51 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 Pfam PF00717 Peptidase S24-like 42 107 3.0E-15 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 Gene3D G3DSA:2.10.109.10 62 212 6.2E-36 T 14-10-2018 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 ProSitePatterns PS00761 Signal peptidases I signature 3. 172 185 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 35 51 1.3E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 83 95 1.3E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_07130 82cc6b44ddd14829938a02ae091aa330 213 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 167 186 1.3E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Gene3D G3DSA:3.40.50.1820 190 715 5.9E-214 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 158 4.0E-47 T 14-10-2018 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 SUPERFAMILY SSF81761 1 159 1.22E-40 T 14-10-2018 IPR036313 PepX, N-terminal domain superfamily DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 SMART SM00940 1 158 7.1E-62 T 14-10-2018 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 SUPERFAMILY SSF53474 169 573 1.25E-88 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 203 521 9.9E-76 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 548 791 1.9E-45 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 SUPERFAMILY SSF49785 591 795 1.51E-59 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Gene3D G3DSA:1.10.246.70 237 467 5.9E-214 T 14-10-2018 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 207 216 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 223 239 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 173 185 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 762 777 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 527 543 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 391 407 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 189 199 8.7E-51 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 SMART SM00939 535 794 2.6E-60 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 DKL56_04890 5bebe4825f3d31f3a0d8d6ff44f31948 798 Gene3D G3DSA:2.60.120.260 247 793 5.9E-214 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DKL56_07570 5c520c707bfd3b2cdbacaa20872b029e 121 Pfam PF05656 Protein of unknown function (DUF805) 12 118 1.4E-21 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 475 2.4E-157 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 SUPERFAMILY SSF101904 503 823 5.1E-108 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Gene3D G3DSA:3.30.1360.40 240 336 5.4E-210 T 14-10-2018 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 9 811 24.037 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 SMART SM00434 15 468 3.5E-271 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 809 0.0 T 14-10-2018 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Gene3D G3DSA:3.90.199.10 36 490 5.4E-210 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Gene3D G3DSA:1.10.268.10 373 461 5.4E-210 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 707 1.6E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 508 549 2.5E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 558 607 5.5E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 712 759 1.9E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 810 1.2E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 658 2.7E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 SUPERFAMILY SSF56719 35 490 4.58E-176 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DKL56_00030 4c7dbf186f1cd7f22f858a3fb650639b 831 Gene3D G3DSA:2.120.10.90 501 810 8.0E-121 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 Pfam PF00313 'Cold-shock' DNA-binding domain 4 65 2.5E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 Gene3D G3DSA:2.40.50.140 3 65 3.8E-19 T 14-10-2018 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 SMART SM00357 3 67 8.2E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 SUPERFAMILY SSF50249 1 66 4.9E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 PRINTS PR00050 Cold shock protein signature 4 19 3.6E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 PRINTS PR00050 Cold shock protein signature 40 58 3.6E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 PRINTS PR00050 Cold shock protein signature 25 34 3.6E-8 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DKL56_03425 ee1b219670b8617e195b19df570f42a1 68 PIRSF PIRSF002599 1 68 2.3E-17 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DKL56_04545 c2a71cfa150e8a6d1553637c8cb65e8d 302 Pfam PF00480 ROK family 4 290 5.0E-36 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DKL56_04545 c2a71cfa150e8a6d1553637c8cb65e8d 302 SUPERFAMILY SSF53067 3 297 1.92E-42 T 14-10-2018 DKL56_04545 c2a71cfa150e8a6d1553637c8cb65e8d 302 Gene3D G3DSA:3.30.420.40 1 98 2.0E-18 T 14-10-2018 DKL56_04545 c2a71cfa150e8a6d1553637c8cb65e8d 302 Gene3D G3DSA:3.30.420.40 100 295 1.1E-39 T 14-10-2018 DKL56_03360 9d9c577004559ff5268f84279a537316 120 Hamap MF_00910 Cell division protein FtsL [ftsL]. 38 120 12.88 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DKL56_03360 9d9c577004559ff5268f84279a537316 120 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 45 119 4.3E-14 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 Gene3D G3DSA:3.20.20.80 2 465 1.0E-155 T 14-10-2018 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 420 2.1E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 361 369 2.1E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 2.1E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 2.1E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 381 392 2.1E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 SUPERFAMILY SSF51445 4 463 6.84E-155 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 361 369 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 6 20 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_05390 fb719487afeec3fd4c7bd46b7b9f901f 474 Pfam PF00232 Glycosyl hydrolase family 1 3 463 6.0E-130 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_02205 d911f398d1c0d037609089579cd8252a 335 SUPERFAMILY SSF56235 4 334 1.85E-97 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DKL56_02205 d911f398d1c0d037609089579cd8252a 335 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 4 312 2.7E-92 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal DKL56_02205 d911f398d1c0d037609089579cd8252a 335 Gene3D G3DSA:3.60.60.10 4 335 1.1E-109 T 14-10-2018 DKL56_02255 04f6e3a876ab24e257fbbb3b65e344f9 144 Pfam PF04397 LytTr DNA-binding domain 48 142 5.7E-17 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_02255 04f6e3a876ab24e257fbbb3b65e344f9 144 Gene3D G3DSA:2.40.50.1020 35 143 1.7E-12 T 14-10-2018 DKL56_02255 04f6e3a876ab24e257fbbb3b65e344f9 144 SMART SM00850 47 143 6.3E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DKL56_04175 f78b4dea684cd15a4a510581e3450a14 292 Gene3D G3DSA:3.30.70.120 201 277 5.1E-17 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DKL56_04175 f78b4dea684cd15a4a510581e3450a14 292 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 284 7.4E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DKL56_04175 f78b4dea684cd15a4a510581e3450a14 292 PIRSF PIRSF006483 2 292 7.1E-91 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_04175 f78b4dea684cd15a4a510581e3450a14 292 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 223 1.0E-56 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 Gene3D G3DSA:3.90.1310.20 72 533 7.1E-177 T 14-10-2018 DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 Pfam PF00912 Transglycosylase 82 255 1.1E-51 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 SUPERFAMILY SSF56601 237 666 2.17E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 631 1.9E-34 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 Gene3D G3DSA:3.40.710.10 323 648 7.1E-177 T 14-10-2018 DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 Gene3D G3DSA:1.10.3810.10 87 283 7.1E-177 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03970 1995e586b0e5aed4891605331690b0d1 779 SUPERFAMILY SSF53955 67 282 1.77E-60 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DKL56_01615 17f353caf132c38fa6921cae19098abd 204 SUPERFAMILY SSF52972 1 197 2.43E-62 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DKL56_01615 17f353caf132c38fa6921cae19098abd 204 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 199 45.526 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DKL56_01615 17f353caf132c38fa6921cae19098abd 204 Pfam PF01725 Ham1 family 4 195 6.8E-55 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DKL56_01615 17f353caf132c38fa6921cae19098abd 204 Gene3D G3DSA:3.90.950.10 1 199 9.6E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DKL56_01615 17f353caf132c38fa6921cae19098abd 204 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 197 6.8E-54 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 SUPERFAMILY SSF46785 1 83 5.76E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.9E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 SUPERFAMILY SSF53850 105 291 5.33E-11 T 14-10-2018 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_07430 820e86b7b11b98de69ebde091e861f5f 299 Gene3D G3DSA:1.10.10.10 1 90 8.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 PIRSF PIRSF029928 1 116 3.0E-29 T 14-10-2018 IPR016940 ComG operon protein C GO:0030420 DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 41 6.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 SUPERFAMILY SSF54523 22 79 7.06E-11 T 14-10-2018 DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 2.2E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 Gene3D G3DSA:3.30.700.10 22 116 3.2E-10 T 14-10-2018 DKL56_02945 f5c6f5a34545c06f5cfb23c528660f31 116 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DKL56_07140 1a73c82a2dd80c1765b3faf3f83d267a 406 Pfam PF07690 Major Facilitator Superfamily 19 277 1.9E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_07140 1a73c82a2dd80c1765b3faf3f83d267a 406 SUPERFAMILY SSF103473 15 400 2.75E-48 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07140 1a73c82a2dd80c1765b3faf3f83d267a 406 Gene3D G3DSA:1.20.1250.20 13 189 4.3E-21 T 14-10-2018 DKL56_07140 1a73c82a2dd80c1765b3faf3f83d267a 406 Gene3D G3DSA:1.20.1250.20 210 401 3.8E-16 T 14-10-2018 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 Gene3D G3DSA:3.30.2350.10 1 243 2.7E-85 T 14-10-2018 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 293 17.727 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 180 1.4E-53 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 237 1.8E-9 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 218 1.4E-70 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_04465 bee30eb5c424b3d521452e4f4397f073 297 SUPERFAMILY SSF55120 1 230 4.03E-71 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_05220 ecd63e7e98db84883b282bcc3e7b9097 116 Hamap MF_01526 UPF0342 protein . 1 112 16.385 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DKL56_05220 ecd63e7e98db84883b282bcc3e7b9097 116 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 108 8.7E-20 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DKL56_05220 ecd63e7e98db84883b282bcc3e7b9097 116 SUPERFAMILY SSF158622 2 113 6.41E-29 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DKL56_05220 ecd63e7e98db84883b282bcc3e7b9097 116 Gene3D G3DSA:1.20.1500.10 1 112 1.8E-28 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DKL56_03295 908d488087d4a73488b2df202b953ce7 385 Pfam PF00266 Aminotransferase class-V 2 366 1.3E-64 T 14-10-2018 IPR000192 Aminotransferase class V domain DKL56_03295 908d488087d4a73488b2df202b953ce7 385 PIRSF PIRSF005572 1 381 2.9E-110 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DKL56_03295 908d488087d4a73488b2df202b953ce7 385 Gene3D G3DSA:3.90.1150.10 2 369 6.0E-120 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_03295 908d488087d4a73488b2df202b953ce7 385 Gene3D G3DSA:1.10.260.50 13 279 6.0E-120 T 14-10-2018 DKL56_03295 908d488087d4a73488b2df202b953ce7 385 SUPERFAMILY SSF53383 1 375 6.05E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_03295 908d488087d4a73488b2df202b953ce7 385 Gene3D G3DSA:3.40.640.10 59 235 6.0E-120 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_05970 59bc8c725a01aae1dd321167bd9cade7 421 Pfam PF02687 FtsX-like permease family 317 414 1.6E-15 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DKL56_05970 59bc8c725a01aae1dd321167bd9cade7 421 Pfam PF12704 MacB-like periplasmic core domain 21 258 1.7E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DKL56_01025 f4aec718c48c52cd6c352a71a3d295ae 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 274 1.2E-88 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 SUPERFAMILY SSF52540 321 478 2.21E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 Gene3D G3DSA:3.40.50.300 104 233 3.4E-24 T 14-10-2018 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 Gene3D G3DSA:3.40.50.300 19 103 4.7E-11 T 14-10-2018 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 Pfam PF00005 ABC transporter 329 446 2.9E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 Pfam PF00005 ABC transporter 47 84 1.1E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 SMART SM00382 331 498 0.31 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 SMART SM00382 52 292 4.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 SUPERFAMILY SSF52540 27 212 1.22E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 ProSitePatterns PS00211 ABC transporters family signature. 418 432 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_01190 de0041fb940aee456f08adf2a80a9766 542 Gene3D G3DSA:3.40.50.300 294 497 1.3E-25 T 14-10-2018 DKL56_02180 e40b067892e0afc1a909387b810c8783 379 Pfam PF07537 CamS sex pheromone cAM373 precursor 62 369 1.4E-107 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 DKL56_02180 e40b067892e0afc1a909387b810c8783 379 PIRSF PIRSF012509 1 377 1.3E-127 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 DKL56_02180 e40b067892e0afc1a909387b810c8783 379 Gene3D G3DSA:3.10.570.10 34 379 7.6E-105 T 14-10-2018 DKL56_06550 b935286dbe0f9b98b14e877f297c7017 349 SUPERFAMILY SSF51445 1 235 2.08E-71 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_06550 b935286dbe0f9b98b14e877f297c7017 349 Pfam PF05913 Bacterial protein of unknown function (DUF871) 1 345 3.5E-114 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic DKL56_06550 b935286dbe0f9b98b14e877f297c7017 349 SUPERFAMILY SSF50891 234 345 3.79E-26 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DKL56_06550 b935286dbe0f9b98b14e877f297c7017 349 Gene3D G3DSA:3.20.20.70 1 237 2.6E-80 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_06550 b935286dbe0f9b98b14e877f297c7017 349 Gene3D G3DSA:2.40.100.10 239 349 6.5E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 Gene3D G3DSA:3.40.50.720 1 161 2.7E-54 T 14-10-2018 DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 161 7.8E-53 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 PIRSF PIRSF000103 1 285 1.6E-74 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 Gene3D G3DSA:1.10.1040.10 162 286 1.7E-38 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 SUPERFAMILY SSF51735 1 161 1.44E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 SUPERFAMILY SSF48179 163 286 2.13E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DKL56_00275 02100e82bebc83b35532369ef2113e3d 287 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 284 5.3E-34 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 SUPERFAMILY SSF53098 1 138 1.52E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 140 25.998 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 Pfam PF03652 Holliday junction resolvase 1 137 1.8E-41 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 137 7.7E-40 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 Gene3D G3DSA:3.30.420.140 1 142 1.7E-44 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DKL56_01580 3bad0a3e6490c7f06a66c29fdc31f638 142 SMART SM00732 1 103 1.9E-36 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 SUPERFAMILY SSF53697 100 227 9.79E-22 T 14-10-2018 DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 Pfam PF01380 SIS domain 108 210 8.2E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 Gene3D G3DSA:1.10.10.10 1 69 4.7E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 SUPERFAMILY SSF46689 4 70 1.34E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 Gene3D G3DSA:3.40.50.10490 87 238 6.7E-22 T 14-10-2018 DKL56_00105 a4d6483dc2a369c656c83a7f7517b81a 238 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 68 3.3E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 ProSitePatterns PS00770 Aminotransferases class-IV signature. 221 250 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 33 337 5.1E-121 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 SUPERFAMILY SSF56752 3 336 1.06E-99 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 Gene3D G3DSA:3.20.10.10 165 340 8.2E-55 T 14-10-2018 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 PIRSF PIRSF006468 1 340 2.6E-116 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 Pfam PF01063 Amino-transferase class IV 59 295 4.0E-33 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DKL56_07645 9a8d3413cbac530aa5e97404a6bd564e 340 Gene3D G3DSA:3.30.470.10 2 162 1.2E-56 T 14-10-2018 DKL56_01180 64ad63aaa8e9580606857c6608e8a641 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 55 2.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_01180 64ad63aaa8e9580606857c6608e8a641 187 SUPERFAMILY SSF46689 8 69 2.1E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_01180 64ad63aaa8e9580606857c6608e8a641 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 8.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_01180 64ad63aaa8e9580606857c6608e8a641 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 8.4E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_01180 64ad63aaa8e9580606857c6608e8a641 187 Gene3D G3DSA:1.10.357.10 2 178 1.9E-15 T 14-10-2018 DKL56_04050 237088a0707073bc642b2c42930861ab 192 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 146 165 1.7E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_04050 237088a0707073bc642b2c42930861ab 192 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 40 56 1.7E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_04050 237088a0707073bc642b2c42930861ab 192 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 92 104 1.7E-17 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_04050 237088a0707073bc642b2c42930861ab 192 SUPERFAMILY SSF51306 39 192 8.89E-50 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DKL56_04050 237088a0707073bc642b2c42930861ab 192 Gene3D G3DSA:2.10.109.10 68 191 1.9E-38 T 14-10-2018 DKL56_04050 237088a0707073bc642b2c42930861ab 192 ProSitePatterns PS00761 Signal peptidases I signature 3. 151 164 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DKL56_04050 237088a0707073bc642b2c42930861ab 192 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 24 187 8.0E-44 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DKL56_04050 237088a0707073bc642b2c42930861ab 192 Pfam PF00717 Peptidase S24-like 46 116 2.1E-14 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DKL56_01035 e449d9e3636a23d9102e10cb98d21a11 371 Pfam PF11175 Protein of unknown function (DUF2961) 82 351 9.0E-79 T 14-10-2018 IPR021345 Protein of unknown function DUF2961 DKL56_01035 e449d9e3636a23d9102e10cb98d21a11 371 Gene3D G3DSA:2.60.120.1390 152 370 8.1E-45 T 14-10-2018 DKL56_01225 b97e0f93aab759142da058ce5ccd1f87 321 Pfam PF03547 Membrane transport protein 7 164 5.3E-19 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DKL56_01225 b97e0f93aab759142da058ce5ccd1f87 321 Pfam PF03547 Membrane transport protein 173 312 8.0E-9 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Pfam PF12631 MnmE helical domain 131 458 1.1E-55 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Gene3D G3DSA:3.30.1360.120 2 128 5.4E-47 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 9 461 32.997 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Gene3D G3DSA:3.40.50.300 225 388 4.3E-104 T 14-10-2018 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Gene3D G3DSA:1.20.120.430 129 461 4.3E-104 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Pfam PF01926 50S ribosome-binding GTPase 228 339 4.5E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 228 377 1.1E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 SUPERFAMILY SSF52540 82 378 2.44E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 10 128 2.4E-41 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DKL56_07830 8da4dfbafe2f7073906709460d791c9d 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 16 461 1.9E-135 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DKL56_07265 abbfc81c0b6f66b500d2f0a21acb49d1 317 Gene3D G3DSA:2.40.260.10 44 238 2.4E-35 T 14-10-2018 IPR023365 Sortase domain superfamily DKL56_07265 abbfc81c0b6f66b500d2f0a21acb49d1 317 Pfam PF04203 Sortase family 100 231 3.9E-19 T 14-10-2018 IPR005754 Sortase family DKL56_07265 abbfc81c0b6f66b500d2f0a21acb49d1 317 SUPERFAMILY SSF63817 93 234 9.68E-31 T 14-10-2018 IPR023365 Sortase domain superfamily DKL56_07265 abbfc81c0b6f66b500d2f0a21acb49d1 317 TIGRFAM TIGR01076 sortase_fam: sortase 98 236 8.9E-17 T 14-10-2018 IPR005754 Sortase family DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 SUPERFAMILY SSF54211 6 133 6.45E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 Pfam PF01205 Uncharacterized protein family UPF0029 21 123 2.2E-28 T 14-10-2018 IPR001498 Impact, N-terminal DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 SUPERFAMILY SSF54980 138 203 7.91E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 199 5.6E-57 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 Gene3D G3DSA:3.30.230.30 2 135 1.7E-45 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily DKL56_02595 f4760dc48919cceb5a067f91f062cdf5 220 Pfam PF09186 Domain of unknown function (DUF1949) 143 197 1.1E-11 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 SUPERFAMILY SSF54686 2 136 1.07E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 Gene3D G3DSA:3.90.1170.10 2 145 5.4E-52 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 Pfam PF00252 Ribosomal protein L16p/L10e 5 133 6.5E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 60 71 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 3 128 3.9E-56 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 2 135 37.129 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 PRINTS PR00060 Ribosomal protein L16 signature 59 88 1.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 PRINTS PR00060 Ribosomal protein L16 signature 43 54 1.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 PRINTS PR00060 Ribosomal protein L16 signature 25 37 1.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 PRINTS PR00060 Ribosomal protein L16 signature 89 118 1.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06115 195d0dd481ad6e883863ad88ee855502 146 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 83 94 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_01845 d791d5aeb1a0f88d7360a205b13cd0fd 341 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 31 337 3.0E-18 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DKL56_01845 d791d5aeb1a0f88d7360a205b13cd0fd 341 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 10 324 3.3E-37 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DKL56_07085 cb8df50d71185342a85a83d081a5f333 163 SUPERFAMILY SSF88659 91 162 4.86E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DKL56_01155 04b664b2ff32fd10f114c80e576813d6 415 Gene3D G3DSA:1.20.1250.20 1 412 1.1E-35 T 14-10-2018 DKL56_01155 04b664b2ff32fd10f114c80e576813d6 415 Pfam PF07690 Major Facilitator Superfamily 21 347 3.5E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_01155 04b664b2ff32fd10f114c80e576813d6 415 SUPERFAMILY SSF103473 4 411 2.09E-41 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_00535 554837e6345d3d0b75811f41240b0f7c 366 Pfam PF03600 Citrate transporter 16 295 2.7E-15 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DKL56_07415 6ad58fc995cfa63ca690dc0cc3d8d170 263 Pfam PF03609 PTS system sorbose-specific iic component 5 234 1.6E-68 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_01015 44a1947c05c2e4519a2651a718876134 165 SUPERFAMILY SSF52728 1 163 8.89E-38 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01015 44a1947c05c2e4519a2651a718876134 165 Gene3D G3DSA:3.40.35.10 1 165 9.2E-45 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01015 44a1947c05c2e4519a2651a718876134 165 Pfam PF03830 PTS system sorbose subfamily IIB component 2 152 1.8E-40 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_04640 bc75035e92424af307ad5f1e5624e757 469 Pfam PF13520 Amino acid permease 24 454 1.2E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_04640 bc75035e92424af307ad5f1e5624e757 469 Gene3D G3DSA:1.20.1740.10 18 468 3.0E-98 T 14-10-2018 DKL56_04640 bc75035e92424af307ad5f1e5624e757 469 PIRSF PIRSF006060 2 467 4.5E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 Pfam PF01479 S4 domain 4 45 6.2E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 Gene3D G3DSA:3.10.290.10 3 59 1.8E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 SUPERFAMILY SSF55120 50 236 6.0E-43 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 SUPERFAMILY SSF55174 5 58 2.16E-14 T 14-10-2018 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 101 115 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 68 228 1.9E-48 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 SMART SM00363 4 63 2.7E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 Pfam PF00849 RNA pseudouridylate synthase 64 198 1.7E-22 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 Gene3D G3DSA:3.30.70.1560 125 217 2.4E-54 T 14-10-2018 DKL56_03685 c3c7421dcd6f5ced454aaf168bd0a59b 239 Gene3D G3DSA:3.30.70.580 66 225 2.4E-54 T 14-10-2018 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 297 309 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 Pfam PF01321 Creatinase/Prolidase N-terminal domain 14 141 4.9E-19 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 Pfam PF00557 Metallopeptidase family M24 148 352 1.1E-63 T 14-10-2018 IPR000994 Peptidase M24 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 Gene3D G3DSA:3.40.350.10 11 141 8.4E-24 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 PRINTS PR00599 Methionine aminopeptidase-1 signature 288 300 4.0E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 PRINTS PR00599 Methionine aminopeptidase-1 signature 320 332 4.0E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 PRINTS PR00599 Methionine aminopeptidase-1 signature 221 237 4.0E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 SUPERFAMILY SSF53092 11 139 1.03E-19 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 Gene3D G3DSA:3.90.230.10 142 365 3.2E-76 T 14-10-2018 DKL56_04840 35ff6ae100206860403f90e1b0398cf1 369 SUPERFAMILY SSF55920 141 365 1.11E-75 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DKL56_04880 983f78644e08a39cc42f14c93621e14f 345 Pfam PF13303 Phosphotransferase system, EIIC 10 340 3.0E-82 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_04240 1e1a6dd0310293c3732f168b028b3cb8 315 Gene3D G3DSA:3.40.50.1360 52 309 4.1E-53 T 14-10-2018 DKL56_04240 1e1a6dd0310293c3732f168b028b3cb8 315 SUPERFAMILY SSF100950 62 308 1.51E-49 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_04240 1e1a6dd0310293c3732f168b028b3cb8 315 Pfam PF04198 Putative sugar-binding domain 60 308 2.2E-45 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DKL56_04240 1e1a6dd0310293c3732f168b028b3cb8 315 Gene3D G3DSA:1.10.10.60 5 51 2.4E-9 T 14-10-2018 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 Gene3D G3DSA:1.10.150.240 14 91 5.0E-59 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 1 188 1.5E-69 T 14-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 187 2.5E-22 T 14-10-2018 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 SUPERFAMILY SSF56784 1 206 4.06E-43 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 187 2.4E-53 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 87 187 3.6E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DKL56_03070 32b4fd109240455686f616b6c6ea3ff6 219 Gene3D G3DSA:3.40.50.1000 2 199 5.0E-59 T 14-10-2018 IPR023214 HAD superfamily DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 254 318 2.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Gene3D G3DSA:1.20.1480.50 156 249 3.8E-14 T 14-10-2018 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Gene3D G3DSA:3.30.565.10 321 476 6.4E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SUPERFAMILY SSF55874 308 472 1.26E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SUPERFAMILY SSF47384 236 320 1.69E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SMART SM00304 193 245 6.0E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 472 1.8E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Gene3D G3DSA:1.10.287.130 250 319 2.5E-19 T 14-10-2018 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SUPERFAMILY SSF158472 195 242 2.35E-9 T 14-10-2018 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 2.6E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SMART SM00387 364 476 7.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DKL56_03035 8e51307da85fed4190048426d3dacf83 483 Pfam PF00672 HAMP domain 197 241 2.1E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DKL56_03035 8e51307da85fed4190048426d3dacf83 483 SMART SM00388 253 319 1.7E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 SUPERFAMILY SSF46785 4 64 6.74E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 SMART SM01134 72 233 1.3E-36 T 14-10-2018 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.2E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.2E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 SUPERFAMILY SSF100950 77 233 4.12E-19 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 Pfam PF00455 DeoR C terminal sensor domain 78 231 3.7E-28 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.7E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 SMART SM00420 6 58 4.9E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_02015 e65c0a523655d46765750de7c88fc77a 254 Gene3D G3DSA:1.10.10.10 1 55 1.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 SUPERFAMILY SSF50249 3 110 1.05E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Pfam PF02938 GAD domain 311 405 1.0E-25 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 557 7.2E-104 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Gene3D G3DSA:2.40.50.140 1 108 4.3E-33 T 14-10-2018 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Pfam PF01336 OB-fold nucleic acid binding domain 20 102 3.5E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Gene3D G3DSA:3.30.930.10 119 581 1.4E-182 T 14-10-2018 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 584 33.135 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 Gene3D G3DSA:3.30.1360.30 275 419 1.4E-182 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 SUPERFAMILY SSF55681 114 584 5.18E-102 T 14-10-2018 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 6.6E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 6.6E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 6.6E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 6.6E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 583 9.9E-229 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DKL56_04205 711c239f4eecac9c258e69f49ea0fdfb 614 SUPERFAMILY SSF55261 292 419 2.29E-38 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DKL56_04825 32c24eb430b1ef6fe2b5f996f8659a04 132 Pfam PF01029 NusB family 5 130 2.0E-27 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DKL56_04825 32c24eb430b1ef6fe2b5f996f8659a04 132 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 131 3.5E-31 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DKL56_04825 32c24eb430b1ef6fe2b5f996f8659a04 132 Gene3D G3DSA:1.10.940.10 1 132 8.1E-30 T 14-10-2018 IPR035926 NusB-like superfamily DKL56_04825 32c24eb430b1ef6fe2b5f996f8659a04 132 SUPERFAMILY SSF48013 3 131 9.94E-27 T 14-10-2018 IPR035926 NusB-like superfamily DKL56_05050 069a0b8b33dce8d3adc0ea43ec500d7d 384 Pfam PF05636 HIGH Nucleotidyl Transferase 1 375 1.5E-109 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 DKL56_05050 069a0b8b33dce8d3adc0ea43ec500d7d 384 SUPERFAMILY SSF52374 10 235 5.32E-17 T 14-10-2018 DKL56_05050 069a0b8b33dce8d3adc0ea43ec500d7d 384 Hamap MF_01539 UPF0348 protein . 2 383 33.901 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 DKL56_05050 069a0b8b33dce8d3adc0ea43ec500d7d 384 Gene3D G3DSA:3.40.50.620 1 235 2.2E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05570 acd7e741e6589b68baae08d895e341ba 112 Pfam PF06156 Initiation control protein YabA 5 100 1.3E-26 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 DKL56_05570 acd7e741e6589b68baae08d895e341ba 112 PIRSF PIRSF021439 1 105 8.6E-34 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 DKL56_07555 eaa57146040e53546da7414fe9b7e9d2 146 SUPERFAMILY SSF88697 1 146 6.21E-52 T 14-10-2018 IPR015947 PUA-like superfamily DKL56_07555 eaa57146040e53546da7414fe9b7e9d2 146 Pfam PF04266 ASCH domain 37 145 7.2E-25 T 14-10-2018 IPR007374 ASCH domain DKL56_07555 eaa57146040e53546da7414fe9b7e9d2 146 Gene3D G3DSA:3.10.400.10 1 146 1.4E-52 T 14-10-2018 DKL56_07555 eaa57146040e53546da7414fe9b7e9d2 146 PIRSF PIRSF021320 1 146 2.9E-51 T 14-10-2018 IPR009326 Protein of unknown function DUF984 DKL56_07555 eaa57146040e53546da7414fe9b7e9d2 146 SMART SM01022 27 146 4.9E-39 T 14-10-2018 IPR007374 ASCH domain DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 Pfam PF00230 Major intrinsic protein 6 234 1.3E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 Gene3D G3DSA:1.20.1080.10 1 240 1.2E-70 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 236 2.4E-55 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 SUPERFAMILY SSF81338 6 239 7.46E-67 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 219 239 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 7 26 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 142 160 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 172 194 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 49 73 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04285 71abfd162d7161d23cc43eb1e212c86c 240 PRINTS PR00783 Major intrinsic protein family signature 86 105 4.6E-45 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DKL56_04340 6b2bc0df25098f4af2de26d185abb3c1 384 Gene3D G3DSA:1.20.1530.20 2 384 8.9E-96 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DKL56_04340 6b2bc0df25098f4af2de26d185abb3c1 384 Pfam PF00999 Sodium/hydrogen exchanger family 8 380 2.9E-74 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 Gene3D G3DSA:3.40.50.720 4 331 3.2E-127 T 14-10-2018 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 SUPERFAMILY SSF55347 153 319 9.82E-58 T 14-10-2018 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PIRSF PIRSF000149 1 339 2.4E-114 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 SMART SM00846 3 153 7.7E-85 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 Gene3D G3DSA:3.30.360.10 152 320 3.2E-127 T 14-10-2018 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 SUPERFAMILY SSF51735 4 169 4.67E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 330 9.7E-126 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 4.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 4.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 4.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.4E-28 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 1.6E-35 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_07360 2350389cb99e357f6537e7bb0f019cc7 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 318 5.7E-52 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 TIGRFAM TIGR00077 lspA: signal peptidase II 4 151 3.6E-28 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 15.622 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 Pfam PF01252 Signal peptidase (SPase) II 9 145 8.1E-34 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 91 106 4.8E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 47 55 4.8E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_03925 d731f127dcf8421f53df5c34491202ad 152 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 4.8E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 Gene3D G3DSA:3.40.50.720 100 288 4.7E-117 T 14-10-2018 DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 SUPERFAMILY SSF51735 104 290 6.37E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 289 2.0E-57 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 21 319 1.4E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 SUPERFAMILY SSF52283 1 138 3.83E-29 T 14-10-2018 DKL56_01330 1af66ebca2e9a6f8e4dd4c73534cb72c 320 Gene3D G3DSA:3.40.50.720 15 318 4.7E-117 T 14-10-2018 DKL56_04670 7b45e6d9d12919e82ed3141ab6fc9a1f 589 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 110 498 2.1E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_04670 7b45e6d9d12919e82ed3141ab6fc9a1f 589 Gene3D G3DSA:3.10.105.10 317 552 4.2E-71 T 14-10-2018 DKL56_04670 7b45e6d9d12919e82ed3141ab6fc9a1f 589 PIRSF PIRSF002741 3 585 1.2E-65 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_04670 7b45e6d9d12919e82ed3141ab6fc9a1f 589 SUPERFAMILY SSF53850 49 583 9.41E-93 T 14-10-2018 DKL56_04670 7b45e6d9d12919e82ed3141ab6fc9a1f 589 Gene3D G3DSA:3.90.76.10 88 203 5.2E-17 T 14-10-2018 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 272 1.3E-78 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Gene3D G3DSA:1.10.10.160 114 188 2.6E-105 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Gene3D G3DSA:3.40.50.300 10 274 2.6E-105 T 14-10-2018 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Gene3D G3DSA:3.40.50.300 283 638 3.0E-130 T 14-10-2018 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 7 746 0.0 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Gene3D G3DSA:1.10.486.10 386 553 3.0E-130 T 14-10-2018 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 Pfam PF13361 UvrD-like helicase C-terminal domain 280 619 2.7E-79 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DKL56_02170 137b85ce598bfff0b49643ed198b5a91 748 SUPERFAMILY SSF52540 4 642 5.96E-180 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06495 e593d82ffad22111e27111c0d803c286 181 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 1.9E-31 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DKL56_06495 e593d82ffad22111e27111c0d803c286 181 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 181 13.766 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DKL56_06495 e593d82ffad22111e27111c0d803c286 181 Gene3D G3DSA:1.10.10.1250 2 82 4.8E-28 T 14-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily DKL56_06495 e593d82ffad22111e27111c0d803c286 181 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 81 1.6E-9 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 DKL56_03050 8a5dda4a3e2e9ee094a53130f1dc314e 207 Pfam PF04892 VanZ like family 68 197 1.5E-26 T 14-10-2018 IPR006976 VanZ-like DKL56_03490 ad2068cbff799c058dde5d21de538ac9 138 Pfam PF13508 Acetyltransferase (GNAT) domain 12 94 1.1E-7 T 14-10-2018 IPR000182 GNAT domain DKL56_03490 ad2068cbff799c058dde5d21de538ac9 138 Gene3D G3DSA:3.40.630.30 1 108 3.1E-22 T 14-10-2018 DKL56_03490 ad2068cbff799c058dde5d21de538ac9 138 SUPERFAMILY SSF55729 8 104 1.77E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 Gene3D G3DSA:1.10.10.10 1 92 3.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 SUPERFAMILY SSF46785 1 86 6.56E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.5E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 Gene3D G3DSA:3.40.190.10 168 270 2.5E-10 T 14-10-2018 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.2E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 SUPERFAMILY SSF53850 118 301 5.65E-8 T 14-10-2018 DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 Pfam PF03466 LysR substrate binding domain 126 300 1.4E-8 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_06345 ce87b759c08db169d3534b6b0c1b0c53 306 Gene3D G3DSA:3.40.190.10 116 300 2.5E-10 T 14-10-2018 DKL56_00400 686ee7a468fe198e465d6b1123e7186b 295 SUPERFAMILY SSF69593 78 261 5.49E-10 T 14-10-2018 DKL56_00400 686ee7a468fe198e465d6b1123e7186b 295 Pfam PF01553 Acyltransferase 78 206 5.5E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DKL56_00400 686ee7a468fe198e465d6b1123e7186b 295 SMART SM00563 93 209 3.6E-10 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DKL56_00880 03957236d92b98ba0590cf74d296e93b 179 SUPERFAMILY SSF52218 1 169 1.86E-31 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_00880 03957236d92b98ba0590cf74d296e93b 179 Gene3D G3DSA:3.40.50.360 1 179 3.0E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DKL56_00880 03957236d92b98ba0590cf74d296e93b 179 Pfam PF03358 NADPH-dependent FMN reductase 1 142 4.6E-27 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DKL56_07000 1ad9224024e6917a9c7fb00b0e76fb52 494 SUPERFAMILY SSF56425 283 434 6.54E-27 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07000 1ad9224024e6917a9c7fb00b0e76fb52 494 Gene3D G3DSA:3.90.700.10 248 426 3.6E-94 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07000 1ad9224024e6917a9c7fb00b0e76fb52 494 Gene3D G3DSA:3.50.50.60 5 490 3.6E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07000 1ad9224024e6917a9c7fb00b0e76fb52 494 SUPERFAMILY SSF51905 2 493 1.07E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07000 1ad9224024e6917a9c7fb00b0e76fb52 494 Pfam PF00890 FAD binding domain 6 469 5.1E-40 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Pfam PF16745 RsgA N-terminal domain 7 58 2.0E-18 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Gene3D G3DSA:3.40.50.300 65 226 6.0E-35 T 14-10-2018 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Gene3D G3DSA:2.40.50.140 2 63 2.3E-17 T 14-10-2018 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 43 283 2.7E-66 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Pfam PF03193 RsgA GTPase 62 226 8.9E-49 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 5 291 34.04 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 SUPERFAMILY SSF52540 71 289 3.33E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 Gene3D G3DSA:1.10.40.50 227 293 2.1E-21 T 14-10-2018 DKL56_04745 600206482e0057745a0e170cc39cf9b3 297 SUPERFAMILY SSF50249 6 65 9.14E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_04990 c50ef693043e767908f19976aed46d48 697 SUPERFAMILY SSF56519 64 316 1.31E-30 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DKL56_04990 c50ef693043e767908f19976aed46d48 697 SUPERFAMILY SSF56601 318 695 4.33E-58 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_04990 c50ef693043e767908f19976aed46d48 697 Gene3D G3DSA:3.40.710.10 317 671 1.3E-198 T 14-10-2018 DKL56_04990 c50ef693043e767908f19976aed46d48 697 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 671 1.3E-55 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DKL56_04990 c50ef693043e767908f19976aed46d48 697 Gene3D G3DSA:3.90.1310.30 69 578 1.3E-198 T 14-10-2018 DKL56_04990 c50ef693043e767908f19976aed46d48 697 Gene3D G3DSA:1.10.10.1230 94 192 1.3E-198 T 14-10-2018 DKL56_04990 c50ef693043e767908f19976aed46d48 697 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 302 8.4E-34 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DKL56_05930 02151bf718e99184dd47dbaa0bce1c8e 149 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 130 6.4E-32 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DKL56_05930 02151bf718e99184dd47dbaa0bce1c8e 149 SUPERFAMILY SSF55804 3 145 3.92E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_05930 02151bf718e99184dd47dbaa0bce1c8e 149 Gene3D G3DSA:3.40.930.10 2 148 4.3E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DKL56_05930 02151bf718e99184dd47dbaa0bce1c8e 149 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 145 1.0E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DKL56_07170 4ebf7536a3dec0d2b75ef286bda90305 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 269 1.3E-81 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DKL56_07170 4ebf7536a3dec0d2b75ef286bda90305 270 SUPERFAMILY SSF161098 74 261 3.66E-34 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07170 4ebf7536a3dec0d2b75ef286bda90305 270 Gene3D G3DSA:1.10.3720.10 73 269 9.5E-34 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07170 4ebf7536a3dec0d2b75ef286bda90305 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 267 1.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02870 12d2cd95393d5efbf88fa62a5d4a7c28 505 Gene3D G3DSA:3.40.50.2000 180 315 2.1E-5 T 14-10-2018 DKL56_02870 12d2cd95393d5efbf88fa62a5d4a7c28 505 Gene3D G3DSA:3.40.50.2000 325 489 3.4E-39 T 14-10-2018 DKL56_02870 12d2cd95393d5efbf88fa62a5d4a7c28 505 SUPERFAMILY SSF53756 242 500 1.44E-47 T 14-10-2018 DKL56_02870 12d2cd95393d5efbf88fa62a5d4a7c28 505 Pfam PF00534 Glycosyl transferases group 1 326 484 1.3E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_02140 052f09815f5e10c88d009eb947d1c091 232 SUPERFAMILY SSF53448 1 211 7.87E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_02140 052f09815f5e10c88d009eb947d1c091 232 Gene3D G3DSA:3.90.550.20 1 222 1.0E-33 T 14-10-2018 DKL56_02140 052f09815f5e10c88d009eb947d1c091 232 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 17 97 2.1E-13 T 14-10-2018 IPR007577 Glycosyltransferase, DXD sugar-binding motif DKL56_05385 c08ee0c706df850cd5522a093e1ef201 430 PIRSF PIRSF006351 1 430 7.0E-135 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_05385 c08ee0c706df850cd5522a093e1ef201 430 Pfam PF02378 Phosphotransferase system, EIIC 26 354 2.0E-67 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_05385 c08ee0c706df850cd5522a093e1ef201 430 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 426 2.3E-110 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 SUPERFAMILY SSF51556 55 352 1.97E-88 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 Pfam PF01979 Amidohydrolase family 52 379 3.9E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 13 379 5.9E-82 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 SUPERFAMILY SSF51338 23 383 1.17E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 Gene3D G3DSA:3.20.20.140 55 352 3.2E-112 T 14-10-2018 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 Gene3D G3DSA:2.30.40.10 18 379 3.2E-112 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DKL56_07215 679a85f865149f8d45ab23e6dd66b2ef 384 PIRSF PIRSF038994 3 384 4.9E-110 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DKL56_02720 1b19bb66fd16f2eef05b1e2a64249886 243 Pfam PF12730 ABC-2 family transporter protein 6 175 2.3E-10 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DKL56_02220 324e861c3c378b8175b0dc2dbe3f8d08 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 67 5.1E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DKL56_02220 324e861c3c378b8175b0dc2dbe3f8d08 73 Gene3D G3DSA:1.10.260.40 2 69 8.5E-7 T 14-10-2018 DKL56_02220 324e861c3c378b8175b0dc2dbe3f8d08 73 SUPERFAMILY SSF47413 8 68 2.65E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_06555 9007ca04ce2ca849e9d33c1a79a79da2 366 SUPERFAMILY SSF50891 249 363 2.5E-33 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DKL56_06555 9007ca04ce2ca849e9d33c1a79a79da2 366 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 362 3.6E-133 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic DKL56_06555 9007ca04ce2ca849e9d33c1a79a79da2 366 Gene3D G3DSA:2.40.100.10 247 364 1.3E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DKL56_06555 9007ca04ce2ca849e9d33c1a79a79da2 366 Gene3D G3DSA:3.20.20.70 1 241 8.8E-86 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_06555 9007ca04ce2ca849e9d33c1a79a79da2 366 SUPERFAMILY SSF51445 1 242 1.9E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 247 3.3E-11 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 272 6.6E-57 T 14-10-2018 DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 37 46 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 SUPERFAMILY SSF56219 1 275 6.67E-55 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 Gene3D G3DSA:3.60.10.10 1 274 2.7E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DKL56_00330 4ce1a97e5630c9d5b093575120c1cb93 275 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 274 6.0E-78 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DKL56_00770 2d6ed386d8a6cd6409554940c0941c18 398 Gene3D G3DSA:3.40.50.2300 169 296 1.6E-103 T 14-10-2018 DKL56_00770 2d6ed386d8a6cd6409554940c0941c18 398 SUPERFAMILY SSF53822 40 391 8.78E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_00770 2d6ed386d8a6cd6409554940c0941c18 398 Gene3D G3DSA:3.40.50.2300 43 373 1.6E-103 T 14-10-2018 DKL56_00770 2d6ed386d8a6cd6409554940c0941c18 398 Pfam PF13458 Periplasmic binding protein 42 381 1.5E-54 T 14-10-2018 IPR028081 Leucine-binding protein domain DKL56_02305 ab5d171ed062e4c66d33eabf651dc049 230 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 229 38.882 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DKL56_02305 ab5d171ed062e4c66d33eabf651dc049 230 Gene3D G3DSA:3.20.20.70 1 230 1.9E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_02305 ab5d171ed062e4c66d33eabf651dc049 230 SUPERFAMILY SSF51366 8 227 9.42E-51 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DKL56_02305 ab5d171ed062e4c66d33eabf651dc049 230 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 34 229 1.1E-76 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DKL56_03330 4c55870a7cec33e43a9d9525e8add318 282 Gene3D G3DSA:2.40.10.340 123 274 4.0E-39 T 14-10-2018 DKL56_03330 4c55870a7cec33e43a9d9525e8add318 282 PIRSF PIRSF038471 1 282 2.4E-71 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DKL56_03330 4c55870a7cec33e43a9d9525e8add318 282 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 279 1.6E-37 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DKL56_03330 4c55870a7cec33e43a9d9525e8add318 282 Pfam PF04085 rod shape-determining protein MreC 126 278 3.8E-33 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DKL56_03330 4c55870a7cec33e43a9d9525e8add318 282 Gene3D G3DSA:2.40.10.350 177 267 4.0E-39 T 14-10-2018 DKL56_06745 03b37a8cc66872ef33781fd777bb46e1 991 SUPERFAMILY SSF53649 720 916 2.62E-7 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DKL56_06745 03b37a8cc66872ef33781fd777bb46e1 991 Pfam PF00884 Sulfatase 648 913 3.5E-18 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DKL56_06745 03b37a8cc66872ef33781fd777bb46e1 991 Gene3D G3DSA:3.40.720.10 608 920 3.0E-18 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 SUPERFAMILY SSF46561 1 62 5.89E-22 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 Pfam PF00831 Ribosomal L29 protein 4 59 2.4E-24 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.124 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 Gene3D G3DSA:1.10.287.310 1 65 4.5E-28 T 14-10-2018 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06110 a99f66330e0ab94468ac45a11c282848 65 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 3.6E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 Gene3D G3DSA:3.40.50.620 1 146 2.3E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 Pfam PF00582 Universal stress protein family 4 146 6.1E-26 T 14-10-2018 IPR006016 UspA DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 SUPERFAMILY SSF52402 4 153 4.35E-30 T 14-10-2018 DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 PRINTS PR01438 Universal stress protein signature 106 118 1.8E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 PRINTS PR01438 Universal stress protein signature 124 146 1.8E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_07195 3755e9a9bd7fe026bfebaae9e3ffbbf3 155 PRINTS PR01438 Universal stress protein signature 3 21 1.8E-15 T 14-10-2018 IPR006015 Universal stress protein A DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 Gene3D G3DSA:3.40.50.720 1 157 2.2E-26 T 14-10-2018 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 SUPERFAMILY SSF48179 156 253 5.95E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 SUPERFAMILY SSF51735 1 153 2.71E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 253 1.9E-29 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 89 4.7E-10 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 PIRSF PIRSF000193 1 254 3.3E-57 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 214 237 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 253 2.0E-59 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 254 19.471 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DKL56_00315 fe1f32d5528d1d15bce88ebd6310b99f 254 Gene3D G3DSA:1.10.3730.10 158 254 6.1E-28 T 14-10-2018 DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 Gene3D G3DSA:3.30.300.70 1 82 1.7E-24 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 Pfam PF02576 RimP N-terminal domain 12 85 3.6E-21 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 SUPERFAMILY SSF75420 3 85 1.02E-22 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 Pfam PF17384 RimP C-terminal SH3 domain 88 157 4.7E-14 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 157 20.29 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 Gene3D G3DSA:2.30.30.180 89 155 2.8E-25 T 14-10-2018 DKL56_04495 a4178fa3ade0ee8ee095910f852f7c31 157 SUPERFAMILY SSF74942 86 157 8.63E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DKL56_07230 f4d7c8608e66123160acddfed1a4b7a7 413 Gene3D G3DSA:1.20.1250.20 12 206 1.9E-31 T 14-10-2018 DKL56_07230 f4d7c8608e66123160acddfed1a4b7a7 413 Gene3D G3DSA:1.20.1250.20 224 412 1.7E-20 T 14-10-2018 DKL56_07230 f4d7c8608e66123160acddfed1a4b7a7 413 SUPERFAMILY SSF103473 12 407 6.02E-61 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07230 f4d7c8608e66123160acddfed1a4b7a7 413 Pfam PF07690 Major Facilitator Superfamily 19 256 1.9E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_07845 c040ec25bad94218c5a8bc267cbcd984 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 4 23 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_07845 c040ec25bad94218c5a8bc267cbcd984 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 44 8.0E-16 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_07845 c040ec25bad94218c5a8bc267cbcd984 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 46 7.9E-21 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_07845 c040ec25bad94218c5a8bc267cbcd984 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 3 46 14.891 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_07845 c040ec25bad94218c5a8bc267cbcd984 46 Pfam PF00468 Ribosomal protein L34 3 46 3.5E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_02355 40a4277d4ade61c58f5187fa17a7e233 380 Gene3D G3DSA:3.40.50.2000 190 351 5.0E-146 T 14-10-2018 DKL56_02355 40a4277d4ade61c58f5187fa17a7e233 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 367 8.7E-154 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 DKL56_02355 40a4277d4ade61c58f5187fa17a7e233 380 SUPERFAMILY SSF53756 3 368 4.71E-136 T 14-10-2018 DKL56_02355 40a4277d4ade61c58f5187fa17a7e233 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 364 3.6E-118 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DKL56_02355 40a4277d4ade61c58f5187fa17a7e233 380 Gene3D G3DSA:3.40.50.2000 6 362 5.0E-146 T 14-10-2018 DKL56_00510 a817c06834d2e694cc802102f0318162 217 Pfam PF02361 Cobalt transport protein 7 182 2.5E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DKL56_06640 b378ce3b7a10cf37117554c9cc848075 159 PIRSF PIRSF006019 1 152 2.3E-50 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DKL56_06640 b378ce3b7a10cf37117554c9cc848075 159 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 7 116 5.0E-26 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DKL56_06640 b378ce3b7a10cf37117554c9cc848075 159 Gene3D G3DSA:3.40.140.10 3 149 1.4E-44 T 14-10-2018 DKL56_06640 b378ce3b7a10cf37117554c9cc848075 159 SUPERFAMILY SSF53927 9 147 7.34E-39 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.740 618 762 2.7E-5 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 484 620 1.86E-16 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49478 1375 1441 7.85E-8 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 640 767 2.24E-19 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 192 330 6.46E-13 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Pfam PF05737 Collagen binding domain 916 1044 8.3E-10 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Pfam PF05737 Collagen binding domain 335 469 1.5E-20 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Pfam PF05737 Collagen binding domain 485 591 4.8E-8 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Pfam PF05737 Collagen binding domain 780 902 9.8E-16 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Pfam PF05737 Collagen binding domain 639 753 1.6E-9 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 913 1050 2.98E-21 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.1280 202 333 1.1E-15 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49478 1561 1630 7.45E-9 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49478 1186 1248 1.61E-5 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1717 1749 5.0E-6 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49478 1468 1535 1.06E-7 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 335 480 7.95E-16 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49478 1283 1350 9.42E-8 T 14-10-2018 DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 SUPERFAMILY SSF49401 777 911 1.32E-18 T 14-10-2018 IPR008966 Adhesion domain superfamily DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1462 1554 4.0E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1065 1167 1.5E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1368 1461 6.5E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1272 1367 4.0E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1555 1655 6.8E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_05975 d2485afb2f61ec5a152a1c2568a02f32 1754 Gene3D G3DSA:2.60.40.10 1168 1262 3.9E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold DKL56_00100 626f388663817432fd81e76d6276b69a 432 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 428 3.9E-133 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_00100 626f388663817432fd81e76d6276b69a 432 Pfam PF02378 Phosphotransferase system, EIIC 31 353 1.7E-56 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_00100 626f388663817432fd81e76d6276b69a 432 PIRSF PIRSF006351 3 432 9.3E-136 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_00100 626f388663817432fd81e76d6276b69a 432 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 14 428 3.9E-133 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.548 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 SUPERFAMILY SSF57840 1 38 8.24E-18 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 6.0E-10 T 14-10-2018 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.9E-22 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 2.2E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06035 b1862675498e3dafe7eda34cdbc95ca2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_01850 cd22f2dcc2bc43b0f2067eb9564231a0 687 Gene3D G3DSA:3.40.720.10 245 556 1.2E-75 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DKL56_01850 cd22f2dcc2bc43b0f2067eb9564231a0 687 PIRSF PIRSF005091 1 635 8.1E-183 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DKL56_01850 cd22f2dcc2bc43b0f2067eb9564231a0 687 SUPERFAMILY SSF53649 251 652 6.73E-81 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DKL56_01850 cd22f2dcc2bc43b0f2067eb9564231a0 687 Pfam PF00884 Sulfatase 253 546 3.6E-36 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DKL56_06880 aa85c92e2a67a7c6e6335ae0e98b633b 158 Pfam PF12821 Threonine/Serine exporter, ThrE 11 136 3.0E-39 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE DKL56_05045 6d10ff7a9735ce659c9fd5a4692cb499 188 Pfam PF02620 Uncharacterized ACR, COG1399 59 175 2.4E-21 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 134 140 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 SUPERFAMILY SSF46767 79 164 3.4E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 Gene3D G3DSA:3.30.160.70 2 74 1.7E-7 T 14-10-2018 DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 164 1.6E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 SUPERFAMILY SSF53155 3 81 1.73E-7 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 Gene3D G3DSA:1.10.10.10 77 166 2.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06715 dfd769dbf14c228f291fba46c056bfac 166 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 163 5.2E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 Gene3D G3DSA:1.10.10.10 221 284 3.6E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 SUPERFAMILY SSF50249 137 211 9.36E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 Gene3D G3DSA:2.40.50.330 1 71 7.1E-15 T 14-10-2018 DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 PIRSF PIRSF012524 1 286 2.5E-84 T 14-10-2018 IPR014464 Conserved virulence factor B DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 Pfam PF13509 S1 domain 2 62 1.7E-13 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 SUPERFAMILY SSF50249 3 59 2.11E-5 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_03660 aa0b60c1656357e0caa761727f2fbce9 295 Gene3D G3DSA:2.40.50.140 72 149 2.4E-30 T 14-10-2018 DKL56_02575 cb7e6a1c5d78c35275138f423971727e 219 Gene3D G3DSA:1.10.3720.10 16 214 4.6E-32 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02575 cb7e6a1c5d78c35275138f423971727e 219 SUPERFAMILY SSF161098 20 204 7.98E-37 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02575 cb7e6a1c5d78c35275138f423971727e 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 215 7.5E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_04560 11db80437844eea547c23342ca6b940b 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DKL56_04560 11db80437844eea547c23342ca6b940b 343 Gene3D G3DSA:3.40.50.150 8 256 8.6E-58 T 14-10-2018 DKL56_04560 11db80437844eea547c23342ca6b940b 343 Pfam PF05175 Methyltransferase small domain 33 173 2.7E-11 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DKL56_04560 11db80437844eea547c23342ca6b940b 343 Gene3D G3DSA:3.40.1440.10 257 343 8.8E-31 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DKL56_04560 11db80437844eea547c23342ca6b940b 343 Pfam PF01541 GIY-YIG catalytic domain 261 334 2.4E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease DKL56_04560 11db80437844eea547c23342ca6b940b 343 SUPERFAMILY SSF82771 260 332 4.32E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DKL56_04560 11db80437844eea547c23342ca6b940b 343 SUPERFAMILY SSF53335 14 198 2.01E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 Pfam PF03306 Alpha-acetolactate decarboxylase 5 222 1.6E-65 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 Gene3D G3DSA:3.30.1330.80 5 219 1.5E-66 T 14-10-2018 DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 Gene3D G3DSA:3.30.1330.80 79 201 1.5E-66 T 14-10-2018 DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 3 231 5.5E-63 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 SUPERFAMILY SSF117856 3 224 4.08E-63 T 14-10-2018 DKL56_06400 8daa44ab64a1d46d09e886c62cfd3dd2 235 PIRSF PIRSF001332 1 235 1.7E-68 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 DKL56_05295 162aaef8dca73388be5808881211c0da 304 SUPERFAMILY SSF51569 5 284 7.57E-90 T 14-10-2018 DKL56_05295 162aaef8dca73388be5808881211c0da 304 Gene3D G3DSA:3.20.20.70 3 303 5.1E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_05295 162aaef8dca73388be5808881211c0da 304 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 4 284 4.0E-88 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DKL56_05295 162aaef8dca73388be5808881211c0da 304 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 6 283 2.9E-105 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DKL56_05295 162aaef8dca73388be5808881211c0da 304 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 283 8.4E-93 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DKL56_05295 162aaef8dca73388be5808881211c0da 304 PIRSF PIRSF001359 2 288 1.3E-101 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 Gene3D G3DSA:3.50.50.60 9 480 8.2E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 Gene3D G3DSA:3.90.700.10 239 415 8.2E-98 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 SUPERFAMILY SSF51905 3 484 4.44E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 439 454 8.5E-7 T 14-10-2018 DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 8.5E-7 T 14-10-2018 DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 SUPERFAMILY SSF56425 268 423 1.08E-25 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_04535 3f5a838688e14eaa190c3a2f125e8f43 485 Pfam PF00890 FAD binding domain 10 454 1.9E-50 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 ProSitePatterns PS01109 Ribosomal protein L10 signature. 9 43 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 7 147 0.003 T 14-10-2018 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 Pfam PF00466 Ribosomal protein L10 7 102 1.1E-25 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 Gene3D G3DSA:3.30.70.1730 2 167 3.8E-37 T 14-10-2018 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 SUPERFAMILY SSF160369 6 163 1.44E-46 T 14-10-2018 DKL56_05635 73e8b674ebf1b0eb223ee925e623980d 169 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 4 164 25.24 T 14-10-2018 IPR022973 Ribosomal protein L10 DKL56_04965 ef33eda8ea78e2b582238473279059d2 134 Pfam PF00581 Rhodanese-like domain 40 126 5.0E-11 T 14-10-2018 IPR001763 Rhodanese-like domain DKL56_04965 ef33eda8ea78e2b582238473279059d2 134 SMART SM00450 36 131 2.4E-6 T 14-10-2018 IPR001763 Rhodanese-like domain DKL56_04965 ef33eda8ea78e2b582238473279059d2 134 SUPERFAMILY SSF52821 15 125 2.36E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DKL56_04965 ef33eda8ea78e2b582238473279059d2 134 Gene3D G3DSA:3.40.250.10 31 132 5.4E-17 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 SUPERFAMILY SSF51261 472 621 6.1E-49 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 Gene3D G3DSA:3.30.1360.60 2 78 2.8E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 Pfam PF00367 phosphotransferase system, EIIB 11 42 5.4E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 477 599 3.2E-46 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 479 597 3.2E-39 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 Gene3D G3DSA:2.70.70.10 465 622 6.9E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 Pfam PF02378 Phosphotransferase system, EIIC 111 389 1.0E-28 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 5 618 2.5E-200 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DKL56_03155 02b7b80f92d449a5017cb490889fe3c6 630 SUPERFAMILY SSF55604 8 80 4.84E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DKL56_07165 6f87bad745aab4b152faa135d60a3a27 188 Pfam PF03352 Methyladenine glycosylase 10 184 1.6E-68 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DKL56_07165 6f87bad745aab4b152faa135d60a3a27 188 SUPERFAMILY SSF48150 5 186 1.88E-63 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DKL56_07165 6f87bad745aab4b152faa135d60a3a27 188 Gene3D G3DSA:1.10.340.30 4 187 2.8E-72 T 14-10-2018 DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 SUPERFAMILY SSF56784 5 269 9.1E-61 T 14-10-2018 IPR036412 HAD-like superfamily DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 219 241 - T 14-10-2018 DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 265 8.1E-53 T 14-10-2018 IPR000150 Cof family GO:0016787 DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 Gene3D G3DSA:3.40.50.1000 7 265 5.6E-70 T 14-10-2018 IPR023214 HAD superfamily DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 238 8.0E-24 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 Gene3D G3DSA:3.30.1240.10 86 195 5.6E-70 T 14-10-2018 DKL56_02910 1cee4c259a0cb7c96f8ec425966bbab7 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 265 8.9E-56 T 14-10-2018 DKL56_01080 4354d7327ebde3ecb3ffe35dc9f4ea36 41 Gene3D G3DSA:1.10.260.40 1 37 1.1E-6 T 14-10-2018 DKL56_01080 4354d7327ebde3ecb3ffe35dc9f4ea36 41 SUPERFAMILY SSF47413 1 36 7.82E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 Gene3D G3DSA:3.40.50.620 1 310 6.1E-134 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 474 38.41 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 318 3.8E-131 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 Pfam PF09190 DALR domain 358 412 3.2E-10 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 SMART SM00840 357 418 1.9E-13 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 Gene3D G3DSA:1.20.120.640 311 474 4.0E-35 T 14-10-2018 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 SUPERFAMILY SSF47323 335 473 3.27E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 SUPERFAMILY SSF52374 2 317 4.35E-97 T 14-10-2018 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 473 1.7E-173 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 8.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 225 246 8.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 8.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DKL56_05715 99d3f3c67c2f1483179a165eb215f092 474 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 194 212 8.5E-30 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DKL56_02045 98d48516ed3c4374bef9121f6d017457 147 Pfam PF13185 GAF domain 41 145 1.7E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 DKL56_02045 98d48516ed3c4374bef9121f6d017457 147 Gene3D G3DSA:3.30.450.40 1 147 3.2E-60 T 14-10-2018 IPR029016 GAF-like domain superfamily DKL56_02045 98d48516ed3c4374bef9121f6d017457 147 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 90 107 - T 14-10-2018 IPR000614 Free Met sulfoxide reductase conserved site DKL56_02045 98d48516ed3c4374bef9121f6d017457 147 SUPERFAMILY SSF55781 3 145 9.81E-40 T 14-10-2018 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 SUPERFAMILY SSF100950 74 230 2.09E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 SMART SM00420 6 58 4.4E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.8E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 9.1E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 Pfam PF00455 DeoR C terminal sensor domain 75 230 2.4E-41 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 SMART SM01134 73 233 2.4E-54 T 14-10-2018 DKL56_06960 d4f66827ceb37a1573a3032e014718ce 251 SUPERFAMILY SSF46785 4 60 1.0E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_02530 fcd7a79a871e2f8fda24fdbf2ba3fd44 186 SUPERFAMILY SSF75217 3 171 1.44E-36 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DKL56_02530 fcd7a79a871e2f8fda24fdbf2ba3fd44 186 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 155 32.12 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DKL56_02530 fcd7a79a871e2f8fda24fdbf2ba3fd44 186 Pfam PF00588 SpoU rRNA Methylase family 4 145 6.7E-28 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DKL56_02530 fcd7a79a871e2f8fda24fdbf2ba3fd44 186 Gene3D G3DSA:3.40.1280.10 1 169 3.4E-67 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DKL56_02530 fcd7a79a871e2f8fda24fdbf2ba3fd44 186 PIRSF PIRSF029256 2 158 1.4E-57 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF03217 SLAP domain 3139 3196 5.5E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF03217 SLAP domain 3290 3334 5.1E-8 T 14-10-2018 IPR024968 SLAP domain DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF03217 SLAP domain 3204 3257 1.3E-16 T 14-10-2018 IPR024968 SLAP domain DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF03217 SLAP domain 3348 3400 1.8E-13 T 14-10-2018 IPR024968 SLAP domain DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 14 49 4.0E-11 T 14-10-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF07564 Domain of Unknown Function (DUF1542) 2991 3066 5.6E-6 T 14-10-2018 IPR011439 Domain of unknown function DUF1542 DKL56_03270 66c68019e3fdf3beaf381b10f7a34273 3402 Pfam PF04650 YSIRK type signal peptide 18 43 1.7E-10 T 14-10-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 Pfam PF00231 ATP synthase 4 319 1.3E-81 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 PRINTS PR00126 ATP synthase gamma subunit signature 266 285 2.0E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 PRINTS PR00126 ATP synthase gamma subunit signature 297 318 2.0E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 PRINTS PR00126 ATP synthase gamma subunit signature 102 121 2.0E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 PRINTS PR00126 ATP synthase gamma subunit signature 195 212 2.0E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 319 30.996 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 305 318 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 Gene3D G3DSA:1.10.287.80 7 315 3.7E-80 T 14-10-2018 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 SUPERFAMILY SSF52943 3 319 2.88E-79 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 319 1.3E-82 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DKL56_03220 d5cabc813ef19d4217955e2b4823b737 320 Gene3D G3DSA:3.40.1380.10 62 238 3.7E-80 T 14-10-2018 DKL56_04170 0cec175c16b44c873a22805be81d29d8 181 Pfam PF01625 Peptide methionine sulfoxide reductase 13 164 3.5E-61 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DKL56_04170 0cec175c16b44c873a22805be81d29d8 181 SUPERFAMILY SSF55068 8 165 2.75E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DKL56_04170 0cec175c16b44c873a22805be81d29d8 181 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 11 170 36.935 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DKL56_04170 0cec175c16b44c873a22805be81d29d8 181 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 13 163 5.6E-63 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DKL56_04170 0cec175c16b44c873a22805be81d29d8 181 Gene3D G3DSA:3.30.1060.10 1 171 2.4E-67 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DKL56_06500 cdd14a3ff39f7043c95c62449211b390 134 Pfam PF09148 Domain of unknown function (DUF1934) 6 131 2.5E-17 T 14-10-2018 IPR015231 Protein of unknown function DUF1934 DKL56_06500 cdd14a3ff39f7043c95c62449211b390 134 SUPERFAMILY SSF50814 3 133 1.08E-22 T 14-10-2018 IPR012674 Calycin DKL56_06500 cdd14a3ff39f7043c95c62449211b390 134 Gene3D G3DSA:2.40.128.20 1 134 1.7E-12 T 14-10-2018 IPR012674 Calycin DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 Gene3D G3DSA:3.40.50.10190 227 316 1.6E-8 T 14-10-2018 IPR036420 BRCT domain superfamily DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 SMART SM00479 32 200 3.6E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 SUPERFAMILY SSF52113 229 315 6.54E-7 T 14-10-2018 IPR036420 BRCT domain superfamily DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 SUPERFAMILY SSF53098 32 205 2.9E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 Pfam PF00929 Exonuclease 36 190 4.2E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DKL56_01110 3bda146475a806d4648e93f2267b57e9 317 Gene3D G3DSA:3.30.420.10 28 199 2.1E-39 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 Gene3D G3DSA:3.40.50.150 7 347 1.7E-94 T 14-10-2018 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 Gene3D G3DSA:3.90.120.10 158 342 1.7E-94 T 14-10-2018 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 SUPERFAMILY SSF53335 5 357 8.63E-85 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 335 353 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 162 175 9.5E-17 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 9.5E-17 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 114 128 9.5E-17 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 76 88 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 354 1.5E-66 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_02225 428e2525352efa82c0fdfb7c509dffee 375 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 7 352 9.1E-59 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 DKL56_07785 ab82ce8d0d7ca474fbc6f21b5957a303 217 Pfam PF00005 ABC transporter 17 163 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_07785 ab82ce8d0d7ca474fbc6f21b5957a303 217 Gene3D G3DSA:3.40.50.300 1 214 3.1E-63 T 14-10-2018 DKL56_07785 ab82ce8d0d7ca474fbc6f21b5957a303 217 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_07785 ab82ce8d0d7ca474fbc6f21b5957a303 217 SUPERFAMILY SSF52540 1 208 1.22E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_07785 ab82ce8d0d7ca474fbc6f21b5957a303 217 SMART SM00382 26 212 4.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06535 cb381716931b26128e24a9815e6161c1 298 SUPERFAMILY SSF53697 6 248 1.31E-72 T 14-10-2018 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 41.753 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 5.7E-120 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 Gene3D G3DSA:1.10.8.1080 219 297 1.5E-23 T 14-10-2018 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 Pfam PF13580 SIS domain 35 164 7.1E-11 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_06535 cb381716931b26128e24a9815e6161c1 298 Gene3D G3DSA:3.40.50.10490 1 218 2.7E-79 T 14-10-2018 DKL56_01395 73c688df5be48f3b7352789a6f3537ab 162 Pfam PF03830 PTS system sorbose subfamily IIB component 3 147 1.2E-43 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_01395 73c688df5be48f3b7352789a6f3537ab 162 SUPERFAMILY SSF52728 1 159 2.49E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01395 73c688df5be48f3b7352789a6f3537ab 162 Gene3D G3DSA:3.40.35.10 1 161 6.6E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_04295 f9c0652cb6ade77c20ab840dbf4a4569 284 Gene3D G3DSA:3.90.550.10 9 281 5.3E-77 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_04295 f9c0652cb6ade77c20ab840dbf4a4569 284 SUPERFAMILY SSF53448 9 277 9.28E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_04295 f9c0652cb6ade77c20ab840dbf4a4569 284 Pfam PF01501 Glycosyl transferase family 8 11 259 6.6E-37 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 Pfam PF07690 Major Facilitator Superfamily 18 407 1.3E-42 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 3.5E-9 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 3.5E-9 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 338 358 3.5E-9 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 3.5E-9 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 Gene3D G3DSA:1.20.1250.20 250 462 6.6E-17 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 Gene3D G3DSA:1.20.1720.10 14 225 1.2E-35 T 14-10-2018 DKL56_03060 dd2e9cf527a8885ffacf89d19dc92d19 462 SUPERFAMILY SSF103473 3 456 3.4E-55 T 14-10-2018 IPR036259 MFS transporter superfamily DKL56_07625 f27144c803917575dff1692215c08c28 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 2.1E-38 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_07625 f27144c803917575dff1692215c08c28 164 Gene3D G3DSA:3.40.35.10 1 163 7.4E-41 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_07625 f27144c803917575dff1692215c08c28 164 SUPERFAMILY SSF52728 1 159 8.24E-41 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 Pfam PF01336 OB-fold nucleic acid binding domain 62 137 2.6E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 6 495 5.9E-200 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 Gene3D G3DSA:3.30.930.10 148 492 2.3E-127 T 14-10-2018 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 495 43.465 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 SUPERFAMILY SSF55681 154 493 3.06E-118 T 14-10-2018 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 9.4E-75 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 3.0E-36 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 3.0E-36 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 3.0E-36 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 3.0E-36 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 3.0E-36 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 SUPERFAMILY SSF50249 5 147 5.14E-38 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DKL56_06225 0ecf87926d6e3745dfbe468d105bc79b 515 Gene3D G3DSA:2.40.50.140 6 147 2.8E-39 T 14-10-2018 DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 SUPERFAMILY SSF160240 204 279 2.35E-13 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 SUPERFAMILY SSF161111 4 201 7.19E-55 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 Pfam PF16916 Dimerisation domain of Zinc Transporter 207 266 1.3E-7 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 Gene3D G3DSA:1.20.1510.10 5 199 1.4E-46 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 279 2.3E-84 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 Pfam PF01545 Cation efflux family 13 200 3.2E-48 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DKL56_05770 359b9b6816947f76d7028c5e1e4f21df 298 Gene3D G3DSA:3.30.70.1350 200 277 1.1E-7 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DKL56_07630 9804c6abf869f48abf2a104a2f775a1c 360 Gene3D G3DSA:3.40.50.1820 5 354 9.3E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07630 9804c6abf869f48abf2a104a2f775a1c 360 SUPERFAMILY SSF53474 91 358 9.96E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07630 9804c6abf869f48abf2a104a2f775a1c 360 Pfam PF07859 alpha/beta hydrolase fold 119 333 3.9E-36 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DKL56_07775 b130a63d4d0b0ab439ce6f7b3bdb8fc7 228 PIRSF PIRSF000705 1 214 3.9E-53 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DKL56_07775 b130a63d4d0b0ab439ce6f7b3bdb8fc7 228 Pfam PF01712 Deoxynucleoside kinase 4 208 1.7E-64 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain DKL56_07775 b130a63d4d0b0ab439ce6f7b3bdb8fc7 228 Gene3D G3DSA:3.40.50.300 2 211 5.3E-54 T 14-10-2018 DKL56_07775 b130a63d4d0b0ab439ce6f7b3bdb8fc7 228 SUPERFAMILY SSF52540 1 209 5.76E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01545 e1e368847e66149d59cb7a0e43a88995 128 SUPERFAMILY SSF52374 1 125 4.1E-33 T 14-10-2018 DKL56_01545 e1e368847e66149d59cb7a0e43a88995 128 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 69 6.0E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_01545 e1e368847e66149d59cb7a0e43a88995 128 Gene3D G3DSA:3.40.50.620 1 128 3.5E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_01545 e1e368847e66149d59cb7a0e43a88995 128 Pfam PF01467 Cytidylyltransferase-like 5 125 2.1E-22 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_01545 e1e368847e66149d59cb7a0e43a88995 128 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 127 1.2E-60 T 14-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DKL56_05100 54ff4341ba3dc96d7dd65eda2604bb7a 212 Gene3D G3DSA:1.10.3720.10 2 212 5.7E-55 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05100 54ff4341ba3dc96d7dd65eda2604bb7a 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 7.4E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_05100 54ff4341ba3dc96d7dd65eda2604bb7a 212 SUPERFAMILY SSF161098 10 203 7.33E-48 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05100 54ff4341ba3dc96d7dd65eda2604bb7a 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 211 7.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_01280 9669b6e4854866c7d744c8232f32577a 120 Pfam PF06115 Domain of unknown function (DUF956) 1 117 1.9E-51 T 14-10-2018 IPR010360 Protein of unknown function DUF956 DKL56_01280 9669b6e4854866c7d744c8232f32577a 120 PIRSF PIRSF021265 1 120 8.9E-49 T 14-10-2018 IPR010360 Protein of unknown function DUF956 DKL56_02030 0161c77cf84c937d944e2b192ff8a316 397 Pfam PF00149 Calcineurin-like phosphoesterase 6 221 1.1E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DKL56_02030 0161c77cf84c937d944e2b192ff8a316 397 Gene3D G3DSA:3.60.21.10 4 286 1.2E-67 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DKL56_02030 0161c77cf84c937d944e2b192ff8a316 397 SUPERFAMILY SSF56300 5 268 3.32E-61 T 14-10-2018 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 153 29.544 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 80 153 1.4E-24 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 Gene3D G3DSA:3.10.50.30 75 153 1.6E-23 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 SUPERFAMILY SSF46557 6 76 3.66E-22 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 PIRSF PIRSF006092 2 153 2.5E-48 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 153 5.2E-45 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 SUPERFAMILY SSF54534 79 152 1.57E-19 T 14-10-2018 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 Gene3D G3DSA:1.10.287.180 4 74 2.8E-22 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DKL56_06670 5a42e92a92053e8c58d3ef844b0afb0a 153 Pfam PF03449 Transcription elongation factor, N-terminal 6 74 1.1E-22 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DKL56_00480 49aec2234f55f87aa4843d97fbab2d0c 265 SUPERFAMILY SSF56281 7 237 4.72E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_00480 49aec2234f55f87aa4843d97fbab2d0c 265 Gene3D G3DSA:3.60.15.10 6 242 1.2E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DKL56_00480 49aec2234f55f87aa4843d97fbab2d0c 265 SMART SM00849 11 219 3.9E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_00480 49aec2234f55f87aa4843d97fbab2d0c 265 Pfam PF12706 Beta-lactamase superfamily domain 22 219 5.5E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 Gene3D G3DSA:3.40.50.300 1 243 7.2E-75 T 14-10-2018 DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 SMART SM00382 28 216 5.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 PIRSF PIRSF039085 1 244 7.0E-97 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 SUPERFAMILY SSF52540 3 238 6.55E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 Pfam PF00005 ABC transporter 19 167 1.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_02050 f5e72546eaa736c574bd816d96455f18 245 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_00775 2b261b3f7028fb68a9f82ad7b5c6dac3 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 276 6.9E-51 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DKL56_02470 2d338874bfa0e7989fa59f25ccb16dca 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 4.3E-36 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DKL56_02470 2d338874bfa0e7989fa59f25ccb16dca 132 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.457 T 14-10-2018 IPR023731 Regulatory protein Spx GO:0045892 DKL56_02470 2d338874bfa0e7989fa59f25ccb16dca 132 Gene3D G3DSA:3.40.30.10 1 131 5.5E-46 T 14-10-2018 DKL56_02470 2d338874bfa0e7989fa59f25ccb16dca 132 Pfam PF03960 ArsC family 5 113 1.3E-22 T 14-10-2018 IPR006660 Arsenate reductase-like DKL56_02470 2d338874bfa0e7989fa59f25ccb16dca 132 SUPERFAMILY SSF52833 1 128 2.18E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DKL56_06335 545931037620d5b133451e9ec385c904 304 SUPERFAMILY SSF53613 1 302 1.53E-84 T 14-10-2018 IPR029056 Ribokinase-like DKL56_06335 545931037620d5b133451e9ec385c904 304 PRINTS PR00990 Ribokinase signature 33 52 1.9E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 PRINTS PR00990 Ribokinase signature 105 118 1.9E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 PRINTS PR00990 Ribokinase signature 6 27 1.9E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 PRINTS PR00990 Ribokinase signature 174 189 1.9E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 PRINTS PR00990 Ribokinase signature 218 229 1.9E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 Gene3D G3DSA:3.40.1190.20 1 303 6.5E-104 T 14-10-2018 IPR029056 Ribokinase-like DKL56_06335 545931037620d5b133451e9ec385c904 304 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 302 1.6E-114 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DKL56_06335 545931037620d5b133451e9ec385c904 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 247 260 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DKL56_06335 545931037620d5b133451e9ec385c904 304 Pfam PF00294 pfkB family carbohydrate kinase 1 296 2.3E-67 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DKL56_06335 545931037620d5b133451e9ec385c904 304 Hamap MF_01987 Ribokinase [rbsK]. 2 303 27.181 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DKL56_05965 1747384ed73923589dd1b229c7ce689f 226 Gene3D G3DSA:3.40.50.300 1 225 2.3E-69 T 14-10-2018 DKL56_05965 1747384ed73923589dd1b229c7ce689f 226 Pfam PF00005 ABC transporter 23 171 8.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05965 1747384ed73923589dd1b229c7ce689f 226 SUPERFAMILY SSF52540 3 223 9.49E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05965 1747384ed73923589dd1b229c7ce689f 226 SMART SM00382 32 220 3.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_05965 1747384ed73923589dd1b229c7ce689f 226 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06420 cf8bd1d9ae43d371ed0db93926354352 428 Pfam PF00860 Permease family 10 389 1.0E-108 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DKL56_06420 cf8bd1d9ae43d371ed0db93926354352 428 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 9 419 9.0E-132 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DKL56_06420 cf8bd1d9ae43d371ed0db93926354352 428 TIGRFAM TIGR03173 pbuX: xanthine permease 14 421 4.3E-159 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 DKL56_05505 44b08b97f31e87a3fe49524ca4357b58 222 Pfam PF06149 Protein of unknown function (DUF969) 3 217 2.1E-77 T 14-10-2018 IPR010374 Protein of unknown function DUF969 DKL56_03670 49707291a2528a6033817cede29d7680 117 Gene3D G3DSA:3.40.630.30 5 106 2.5E-5 T 14-10-2018 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 Pfam PF00410 Ribosomal protein S8 5 132 1.0E-53 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 Gene3D G3DSA:3.30.1370.30 2 74 5.5E-32 T 14-10-2018 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 SUPERFAMILY SSF56047 2 132 1.57E-49 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.933 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06080 7d7de5f4771bf202978d4090f70fd536 132 Gene3D G3DSA:3.30.1490.10 75 132 4.4E-25 T 14-10-2018 DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 Gene3D G3DSA:2.30.42.10 135 220 1.7E-22 T 14-10-2018 DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 Pfam PF13180 PDZ domain 131 200 3.2E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 233 341 1.7E-9 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 SUPERFAMILY SSF54211 235 343 2.47E-18 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 SUPERFAMILY SSF50156 136 221 5.06E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DKL56_03540 5ffed2a5fce859e64625822a97e95012 347 Gene3D G3DSA:3.30.230.10 221 345 2.3E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 Gene3D G3DSA:3.40.50.150 1 184 1.7E-55 T 14-10-2018 DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 Pfam PF03602 Conserved hypothetical protein 95 1 180 4.3E-56 T 14-10-2018 DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 SUPERFAMILY SSF53335 1 180 2.65E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 1.0E-47 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DKL56_03530 b793ecda8eee0a3b3e9dc59858e1efca 184 PIRSF PIRSF004553 1 183 4.5E-50 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 SUPERFAMILY SSF55031 173 288 4.49E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DKL56_06910 594bf1e6b95d102780898a47821067e2 380 Pfam PF01546 Peptidase family M20/M25/M40 66 373 1.7E-36 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 139 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 8 361 7.1E-90 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase DKL56_06910 594bf1e6b95d102780898a47821067e2 380 Gene3D G3DSA:3.40.630.10 10 362 3.8E-96 T 14-10-2018 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 Gene3D G3DSA:3.30.70.360 174 291 3.8E-96 T 14-10-2018 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 SUPERFAMILY SSF53187 3 375 2.46E-59 T 14-10-2018 DKL56_06910 594bf1e6b95d102780898a47821067e2 380 Pfam PF07687 Peptidase dimerisation domain 171 278 1.9E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DKL56_06910 594bf1e6b95d102780898a47821067e2 380 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DKL56_05135 ae2fe25632229b4d00b22a324c2f6bfc 200 Pfam PF01121 Dephospho-CoA kinase 3 183 6.1E-56 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DKL56_05135 ae2fe25632229b4d00b22a324c2f6bfc 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.0E-55 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DKL56_05135 ae2fe25632229b4d00b22a324c2f6bfc 200 Gene3D G3DSA:3.40.50.300 1 200 5.8E-72 T 14-10-2018 DKL56_05135 ae2fe25632229b4d00b22a324c2f6bfc 200 SUPERFAMILY SSF52540 1 193 7.64E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05135 ae2fe25632229b4d00b22a324c2f6bfc 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 27.421 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 PIRSF PIRSF002741 1 542 1.3E-101 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 Gene3D G3DSA:3.10.105.10 294 514 2.4E-148 T 14-10-2018 DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 Gene3D G3DSA:3.40.190.10 47 527 2.4E-148 T 14-10-2018 DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 463 6.6E-70 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 Gene3D G3DSA:3.90.76.10 68 192 2.4E-148 T 14-10-2018 DKL56_02080 7140c9cce277c8b9aaa5a58867bdef08 542 SUPERFAMILY SSF53850 29 538 5.43E-115 T 14-10-2018 DKL56_03255 ae8cde076d37820103b0567b5dfd48bd 397 Pfam PF01098 Cell cycle protein 16 386 1.1E-82 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_05985 fbb46f614b3ba07356084f219cacf0ad 131 ProSitePatterns PS00360 Ribosomal protein S9 signature. 70 88 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DKL56_05985 fbb46f614b3ba07356084f219cacf0ad 131 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 131 34.088 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DKL56_05985 fbb46f614b3ba07356084f219cacf0ad 131 SUPERFAMILY SSF54211 7 131 7.59E-49 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DKL56_05985 fbb46f614b3ba07356084f219cacf0ad 131 Pfam PF00380 Ribosomal protein S9/S16 11 131 7.4E-48 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DKL56_05985 fbb46f614b3ba07356084f219cacf0ad 131 Gene3D G3DSA:3.30.230.10 2 131 7.3E-53 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DKL56_04080 af1cf88196e8f3cf2514978bcd970d24 117 SMART SM00345 13 72 2.5E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_04080 af1cf88196e8f3cf2514978bcd970d24 117 Gene3D G3DSA:1.10.10.10 6 117 1.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_04080 af1cf88196e8f3cf2514978bcd970d24 117 SUPERFAMILY SSF46785 3 79 6.53E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_04080 af1cf88196e8f3cf2514978bcd970d24 117 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 72 6.9E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 Gene3D G3DSA:3.80.10.10 68 342 2.1E-18 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 129 153 1.0E-5 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 205 225 6.0E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 179 202 8.6E-13 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 Pfam PF03217 SLAP domain 386 435 1.4E-13 T 14-10-2018 IPR024968 SLAP domain DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 Pfam PF03217 SLAP domain 443 495 1.1E-17 T 14-10-2018 IPR024968 SLAP domain DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 168 265 1.1E-17 T 14-10-2018 IPR005046 Protein of unknown function DUF285 DKL56_07270 f46b7f400595fbbea2ead48d30e8839c 497 SUPERFAMILY SSF52047 111 250 3.14E-13 T 14-10-2018 DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 SMART SM00047 36 198 4.7E-45 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 Pfam PF03217 SLAP domain 351 403 1.5E-16 T 14-10-2018 IPR024968 SLAP domain DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 Pfam PF03217 SLAP domain 288 342 5.1E-19 T 14-10-2018 IPR024968 SLAP domain DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 Gene3D G3DSA:4.10.80.30 100 126 7.8E-50 T 14-10-2018 DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 Gene3D G3DSA:1.10.530.10 47 198 7.8E-50 T 14-10-2018 DKL56_07080 a2aa2eac3b93eb47b8cc378021cb3d08 405 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 54 194 9.2E-20 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DKL56_00080 570efc80d26f1245c51fb61046b5426b 399 SUPERFAMILY SSF53474 75 202 5.55E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00080 570efc80d26f1245c51fb61046b5426b 399 Pfam PF11187 Protein of unknown function (DUF2974) 76 298 3.5E-71 T 14-10-2018 IPR024499 Protein of unknown function DUF2974 DKL56_00080 570efc80d26f1245c51fb61046b5426b 399 Gene3D G3DSA:3.40.50.1820 111 299 1.0E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_05690 0b986a2a4732c5ed8842d620dce1f764 49 SUPERFAMILY SSF57829 4 49 2.38E-13 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DKL56_05690 0b986a2a4732c5ed8842d620dce1f764 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 49 14.212 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05690 0b986a2a4732c5ed8842d620dce1f764 49 Pfam PF00471 Ribosomal protein L33 5 49 1.1E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05690 0b986a2a4732c5ed8842d620dce1f764 49 Gene3D G3DSA:2.20.28.120 2 49 2.9E-16 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05690 0b986a2a4732c5ed8842d620dce1f764 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 49 2.5E-14 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05335 df308be102ec05490bc9d7717b2371ca 547 Pfam PF01943 Polysaccharide biosynthesis protein 16 326 1.2E-23 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DKL56_05335 df308be102ec05490bc9d7717b2371ca 547 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 379 526 6.7E-23 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DKL56_05335 df308be102ec05490bc9d7717b2371ca 547 PIRSF PIRSF038958 10 543 1.2E-82 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DKL56_05325 98dcc4d82295f610076ec9b0a9641ac8 73 Pfam PF04024 PspC domain 3 58 1.5E-17 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 PIRSF PIRSF026583 10 673 4.7E-248 T 14-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 Pfam PF02272 DHHA1 domain 537 665 1.1E-12 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 Gene3D G3DSA:3.10.310.30 585 672 2.2E-10 T 14-10-2018 DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 Gene3D G3DSA:3.30.450.20 65 175 3.4E-33 T 14-10-2018 DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 SUPERFAMILY SSF55073 177 312 4.51E-5 T 14-10-2018 IPR029787 Nucleotide cyclase DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 Pfam PF01368 DHH family 353 514 3.0E-20 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 SUPERFAMILY SSF64182 352 660 1.31E-63 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 SMART SM00267 144 313 0.0016 T 14-10-2018 IPR000160 GGDEF domain DKL56_00060 0a59e3a1b2d3fc1be97b46084a0efde1 673 Gene3D G3DSA:3.90.1640.10 336 558 2.3E-45 T 14-10-2018 DKL56_06755 f2e6de93507a5b084d10396cefd6e54b 365 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 98 245 4.3E-36 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DKL56_06755 f2e6de93507a5b084d10396cefd6e54b 365 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 99 244 2.6E-40 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DKL56_06755 f2e6de93507a5b084d10396cefd6e54b 365 Gene3D G3DSA:1.10.260.150 60 359 4.0E-76 T 14-10-2018 DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 Gene3D G3DSA:3.40.1700.10 104 258 1.5E-57 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 120 238 1.2E-43 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 PIRSF PIRSF004793 6 274 1.2E-84 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 SUPERFAMILY SSF143597 42 242 1.2E-67 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 13 258 6.1E-84 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DKL56_02825 55384eaab9a16ccb22fc4e6f4ab23c61 281 Hamap MF_01499 Diadenylate cyclase [dacA]. 9 257 32.646 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DKL56_04185 a64bd9a2348792b1018d41241684a282 398 SUPERFAMILY SSF53383 12 392 1.58E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DKL56_04185 a64bd9a2348792b1018d41241684a282 398 Gene3D G3DSA:3.90.1150.10 35 387 5.7E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DKL56_04185 a64bd9a2348792b1018d41241684a282 398 Gene3D G3DSA:3.40.640.10 65 289 5.7E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DKL56_04185 a64bd9a2348792b1018d41241684a282 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DKL56_04185 a64bd9a2348792b1018d41241684a282 398 Pfam PF00155 Aminotransferase class I and II 37 387 5.7E-67 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DKL56_05345 69ac1952f78059e4f839161e795241d6 228 Pfam PF01569 PAP2 superfamily 104 214 1.4E-17 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKL56_05345 69ac1952f78059e4f839161e795241d6 228 Gene3D G3DSA:1.20.144.10 17 131 1.1E-9 T 14-10-2018 DKL56_05345 69ac1952f78059e4f839161e795241d6 228 Gene3D G3DSA:1.20.144.10 132 227 8.5E-22 T 14-10-2018 DKL56_05345 69ac1952f78059e4f839161e795241d6 228 SUPERFAMILY SSF48317 19 221 2.09E-33 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DKL56_05345 69ac1952f78059e4f839161e795241d6 228 SMART SM00014 99 212 6.5E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 Pfam PF00579 tRNA synthetases class I (W and Y) 6 289 2.2E-59 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 Gene3D G3DSA:3.40.50.620 6 329 4.9E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 4.3E-82 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 6.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 6.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 6.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 6.3E-26 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 SUPERFAMILY SSF52374 5 334 3.94E-84 T 14-10-2018 DKL56_06645 17853ff826abaa84d0fd7d6579fb52fc 339 Gene3D G3DSA:1.10.240.10 186 302 4.9E-112 T 14-10-2018 DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 Pfam PF00005 ABC transporter 25 173 8.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 SMART SM00382 33 221 1.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 SUPERFAMILY SSF52540 6 234 1.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 Gene3D G3DSA:3.40.50.300 2 283 1.5E-78 T 14-10-2018 DKL56_06010 7ddf077a45ff8624ab5c23739d10f2cc 283 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 7 277 4.6E-113 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 DKL56_02635 35dca157129cd156d22e7c54e355c65b 278 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 133 145 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DKL56_02635 35dca157129cd156d22e7c54e355c65b 278 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 7 261 4.6E-69 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DKL56_02635 35dca157129cd156d22e7c54e355c65b 278 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 4 260 16.967 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DKL56_02635 35dca157129cd156d22e7c54e355c65b 278 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 7 255 1.1E-73 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DKL56_04065 1e3ca6c3e34eb627944ae5f4d2e754ba 234 SUPERFAMILY SSF52540 3 221 3.65E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04065 1e3ca6c3e34eb627944ae5f4d2e754ba 234 Pfam PF00005 ABC transporter 20 155 3.7E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_04065 1e3ca6c3e34eb627944ae5f4d2e754ba 234 Gene3D G3DSA:3.40.50.300 1 232 2.3E-39 T 14-10-2018 DKL56_04065 1e3ca6c3e34eb627944ae5f4d2e754ba 234 SMART SM00382 29 204 6.6E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06935 fc79bb17d521b816465e973cc68d77f5 206 SUPERFAMILY SSF52540 2 194 2.85E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06935 fc79bb17d521b816465e973cc68d77f5 206 Gene3D G3DSA:3.40.50.300 1 206 4.9E-51 T 14-10-2018 DKL56_06935 fc79bb17d521b816465e973cc68d77f5 206 Pfam PF00005 ABC transporter 10 143 8.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06935 fc79bb17d521b816465e973cc68d77f5 206 SMART SM00382 18 188 7.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03750 3f5c0a51b892a25703bebb46e2dfa8ea 221 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 23 221 2.2E-58 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DKL56_03750 3f5c0a51b892a25703bebb46e2dfa8ea 221 Pfam PF03006 Haemolysin-III related 18 214 6.4E-35 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 397 414 9.9E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 287 301 9.9E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 355 363 9.9E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 386 9.9E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 421 433 9.9E-13 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 Pfam PF00232 Glycosyl hydrolase family 1 6 456 1.2E-117 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 Gene3D G3DSA:3.20.20.80 3 458 2.0E-133 T 14-10-2018 DKL56_06585 14e3b6dde30fdcba01eda15fa233fe4f 460 SUPERFAMILY SSF51445 8 456 3.32E-139 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_00075 017550488d6f69f0b303d4d6978efdb9 52 SUPERFAMILY SSF47162 4 52 8.89E-6 T 14-10-2018 DKL56_00075 017550488d6f69f0b303d4d6978efdb9 52 Gene3D G3DSA:1.20.120.20 3 52 6.0E-7 T 14-10-2018 DKL56_03145 755d18690609bbedd7f139e7e3aff181 223 Pfam PF06458 MucBP domain 54 116 8.4E-13 T 14-10-2018 IPR009459 MucBP domain DKL56_03145 755d18690609bbedd7f139e7e3aff181 223 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 186 222 5.1E-4 T 14-10-2018 DKL56_03145 755d18690609bbedd7f139e7e3aff181 223 Gene3D G3DSA:3.10.20.320 48 129 8.5E-19 T 14-10-2018 DKL56_03145 755d18690609bbedd7f139e7e3aff181 223 Pfam PF00746 LPXTG cell wall anchor motif 180 222 2.2E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DKL56_07480 246c1200aac71940ac7fe172e20abf6f 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 269 4.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_07480 246c1200aac71940ac7fe172e20abf6f 276 SUPERFAMILY SSF161098 3 265 3.08E-49 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07480 246c1200aac71940ac7fe172e20abf6f 276 Gene3D G3DSA:1.10.3720.10 4 271 9.7E-53 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00800 174dcd437d2f9713c8486a68165361bb 215 SUPERFAMILY SSF53254 1 213 1.31E-52 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_00800 174dcd437d2f9713c8486a68165361bb 215 Gene3D G3DSA:3.40.50.1240 1 215 2.2E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_00800 174dcd437d2f9713c8486a68165361bb 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 210 1.3E-34 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_00800 174dcd437d2f9713c8486a68165361bb 215 SMART SM00855 3 176 2.3E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05285 66cc9168def80c92c7feac65b4646897 189 Gene3D G3DSA:3.40.50.1240 1 186 6.5E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05285 66cc9168def80c92c7feac65b4646897 189 SUPERFAMILY SSF53254 1 179 1.61E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_05285 66cc9168def80c92c7feac65b4646897 189 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DKL56_05285 66cc9168def80c92c7feac65b4646897 189 PIRSF PIRSF000709 1 94 1.5E-9 T 14-10-2018 DKL56_05285 66cc9168def80c92c7feac65b4646897 189 PIRSF PIRSF000709 104 150 9.3 T 14-10-2018 DKL56_05285 66cc9168def80c92c7feac65b4646897 189 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 184 6.2E-37 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_05285 66cc9168def80c92c7feac65b4646897 189 SMART SM00855 3 148 8.7E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 Gene3D G3DSA:3.20.20.80 2 480 1.8E-160 T 14-10-2018 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 SUPERFAMILY SSF51445 3 473 6.94E-162 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 Pfam PF00232 Glycosyl hydrolase family 1 4 477 3.9E-133 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 308 322 9.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 9.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 417 434 9.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 9.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 PRINTS PR00131 Glycosyl hydrolase family 1 signature 442 454 9.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DKL56_01960 2d484968e4b3dc0e99dd09fcbf13bec1 481 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_05550 eee5ef00faaf9fe48813bdbbc68d8c91 246 SUPERFAMILY SSF53067 1 102 1.77E-27 T 14-10-2018 DKL56_05550 eee5ef00faaf9fe48813bdbbc68d8c91 246 Pfam PF00814 Glycoprotease family 32 137 6.5E-27 T 14-10-2018 IPR000905 Gcp-like domain DKL56_05550 eee5ef00faaf9fe48813bdbbc68d8c91 246 Gene3D G3DSA:3.30.420.40 3 221 1.6E-44 T 14-10-2018 DKL56_05550 eee5ef00faaf9fe48813bdbbc68d8c91 246 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 220 1.5E-47 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DKL56_05550 eee5ef00faaf9fe48813bdbbc68d8c91 246 Gene3D G3DSA:3.30.420.40 95 189 1.6E-44 T 14-10-2018 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 Gene3D G3DSA:3.30.2130.30 12 246 8.3E-113 T 14-10-2018 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 SUPERFAMILY SSF53335 143 362 3.05E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 SMART SM00981 57 155 1.8E-6 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 Pfam PF02926 THUMP domain 31 122 2.6E-6 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 Gene3D G3DSA:3.40.50.150 161 365 8.3E-113 T 14-10-2018 DKL56_03945 a5d6d1ac0ca52598b8d77f32820ec032 374 Pfam PF01170 Putative RNA methylase family UPF0020 163 364 3.9E-49 T 14-10-2018 IPR000241 Putative RNA methylase domain DKL56_01605 92307ad80b91ec0b4c3edf9959682e2b 135 SUPERFAMILY SSF111126 9 118 6.28E-22 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DKL56_01605 92307ad80b91ec0b4c3edf9959682e2b 135 Pfam PF10702 Protein of unknown function (DUF2507) 12 132 1.1E-40 T 14-10-2018 IPR019642 Protein of unknown function DUF2507 DKL56_01605 92307ad80b91ec0b4c3edf9959682e2b 135 Gene3D G3DSA:3.30.1380.20 1 135 1.0E-42 T 14-10-2018 DKL56_07760 ba594686d78412bde198c7a103bd581d 62 Pfam PF10031 Small integral membrane protein (DUF2273) 4 50 1.6E-12 T 14-10-2018 IPR018730 Protein of unknown function DUF2273 DKL56_00795 523faafb176a7ba2c3ec0c983b5f0dda 196 Gene3D G3DSA:3.40.390.10 33 196 6.2E-17 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DKL56_00795 523faafb176a7ba2c3ec0c983b5f0dda 196 Pfam PF00413 Matrixin 67 194 6.1E-7 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 DKL56_00795 523faafb176a7ba2c3ec0c983b5f0dda 196 SUPERFAMILY SSF55486 48 194 1.02E-18 T 14-10-2018 DKL56_02060 ac6dda210d7565434185ff0af7526047 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 211 7.1E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02060 ac6dda210d7565434185ff0af7526047 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 106 1.4E-23 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_02060 ac6dda210d7565434185ff0af7526047 212 SUPERFAMILY SSF161098 10 200 5.36E-49 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02060 ac6dda210d7565434185ff0af7526047 212 Gene3D G3DSA:1.10.3720.10 3 212 1.8E-56 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05270 53df3c043f7e96c9b8ef8eaad692b1ac 456 Pfam PF00144 Beta-lactamase 8 324 1.9E-53 T 14-10-2018 IPR001466 Beta-lactamase-related DKL56_05270 53df3c043f7e96c9b8ef8eaad692b1ac 456 SUPERFAMILY SSF56601 4 331 1.0E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_05270 53df3c043f7e96c9b8ef8eaad692b1ac 456 Gene3D G3DSA:3.40.710.10 4 336 2.1E-73 T 14-10-2018 DKL56_00650 d8bd46d83f6f886fb1351f63be4606c7 321 Pfam PF06207 Protein of unknown function (DUF1002) 38 272 1.8E-55 T 14-10-2018 IPR009343 Protein of unknown function DUF1002 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 SUPERFAMILY SSF47781 162 234 2.22E-30 T 14-10-2018 IPR010994 RuvA domain 2-like DKL56_03545 de17107784bc5836d839c82bd624bffa 237 Gene3D G3DSA:1.10.150.280 164 236 2.0E-24 T 14-10-2018 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 SUPERFAMILY SSF142984 83 115 1.96E-5 T 14-10-2018 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 Pfam PF10531 SLBB domain 83 122 9.9E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 SMART SM00278 185 204 0.018 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 SMART SM00278 215 234 5.9 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DKL56_03545 de17107784bc5836d839c82bd624bffa 237 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 173 235 6.1E-26 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DKL56_03545 de17107784bc5836d839c82bd624bffa 237 Pfam PF12836 Helix-hairpin-helix motif 175 235 7.5E-26 T 14-10-2018 DKL56_06765 005945a6117952f0a6055ac029ebe783 95 SUPERFAMILY SSF143100 6 54 1.96E-9 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like DKL56_06765 005945a6117952f0a6055ac029ebe783 95 Gene3D G3DSA:3.30.160.250 2 92 8.4E-20 T 14-10-2018 DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 Gene3D G3DSA:3.40.50.10490 100 278 4.7E-18 T 14-10-2018 DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 SUPERFAMILY SSF53697 97 257 1.58E-16 T 14-10-2018 DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 Gene3D G3DSA:1.10.10.10 2 99 9.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 SUPERFAMILY SSF46689 10 72 2.87E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 Pfam PF01380 SIS domain 127 238 2.2E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DKL56_05395 eb1bd479ef86e2f4d4538521df75f0a3 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 72 6.5E-17 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DKL56_03095 08f2e419cff3e536ca7aeae2493f3775 424 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 423 1.4E-82 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_03095 08f2e419cff3e536ca7aeae2493f3775 424 PIRSF PIRSF006351 1 424 1.5E-98 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_03095 08f2e419cff3e536ca7aeae2493f3775 424 Pfam PF02378 Phosphotransferase system, EIIC 29 346 3.5E-41 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_03065 103710303afacbc0b321342dd1d37b02 362 Pfam PF13303 Phosphotransferase system, EIIC 18 353 1.0E-87 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_03960 a7746a2762a3ecc9d1d69fa19ea16661 189 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 3.7E-66 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DKL56_03960 a7746a2762a3ecc9d1d69fa19ea16661 189 SUPERFAMILY SSF102405 1 177 2.11E-59 T 14-10-2018 DKL56_03960 a7746a2762a3ecc9d1d69fa19ea16661 189 PIRSF PIRSF021290 1 179 5.1E-66 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DKL56_03960 a7746a2762a3ecc9d1d69fa19ea16661 189 Gene3D G3DSA:3.40.50.450 1 180 2.4E-58 T 14-10-2018 DKL56_03960 a7746a2762a3ecc9d1d69fa19ea16661 189 Hamap MF_01575 UPF0398 protein . 1 177 35.293 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DKL56_05665 36d4def18f6a63d56e9a2da85a2fb641 288 Gene3D G3DSA:3.40.190.10 104 226 8.3E-79 T 14-10-2018 DKL56_05665 36d4def18f6a63d56e9a2da85a2fb641 288 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 28 268 4.7E-73 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 DKL56_05665 36d4def18f6a63d56e9a2da85a2fb641 288 Gene3D G3DSA:3.40.190.10 32 269 8.3E-79 T 14-10-2018 DKL56_05665 36d4def18f6a63d56e9a2da85a2fb641 288 SUPERFAMILY SSF53850 30 277 3.52E-69 T 14-10-2018 DKL56_05665 36d4def18f6a63d56e9a2da85a2fb641 288 Pfam PF12849 PBP superfamily domain 25 255 1.1E-38 T 14-10-2018 IPR024370 PBP domain DKL56_07850 8ef780d096633b5fcf677741aa76df23 44 Pfam PF13061 Protein of unknown function (DUF3923) 6 44 5.7E-12 T 14-10-2018 IPR025037 Protein of unknown function DUF3923 DKL56_02295 e54e9552ecad70908a22506ec1362462 161 Gene3D G3DSA:3.90.960.10 1 161 1.7E-49 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_02295 e54e9552ecad70908a22506ec1362462 161 Pfam PF04073 Aminoacyl-tRNA editing domain 24 146 1.2E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DKL56_02295 e54e9552ecad70908a22506ec1362462 161 SUPERFAMILY SSF55826 3 160 6.02E-42 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04270 cae3ee7e096d0bbcc502d5f2a779d0e1 212 Pfam PF03932 CutC family 1 210 1.7E-62 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 DKL56_04270 cae3ee7e096d0bbcc502d5f2a779d0e1 212 SUPERFAMILY SSF110395 1 211 8.37E-55 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 DKL56_04270 cae3ee7e096d0bbcc502d5f2a779d0e1 212 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 212 26.554 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 DKL56_04270 cae3ee7e096d0bbcc502d5f2a779d0e1 212 Gene3D G3DSA:3.20.20.380 1 212 3.7E-71 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 DKL56_07070 1619c514b3b99092568a3fef536ebb7c 147 Pfam PF00583 Acetyltransferase (GNAT) family 40 131 4.8E-12 T 14-10-2018 IPR000182 GNAT domain DKL56_07070 1619c514b3b99092568a3fef536ebb7c 147 SUPERFAMILY SSF55729 1 139 3.14E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_07070 1619c514b3b99092568a3fef536ebb7c 147 Gene3D G3DSA:3.40.630.30 1 144 4.0E-27 T 14-10-2018 DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 Gene3D G3DSA:3.50.50.60 285 438 1.7E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 Gene3D G3DSA:3.50.50.60 2 178 2.2E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 SUPERFAMILY SSF51905 3 366 3.35E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 Pfam PF01134 Glucose inhibited division protein A 5 364 3.2E-110 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 435 35.783 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DKL56_03825 61794db0dfb8ed74bf5ad2ac4e293256 438 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 435 8.2E-210 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 SMART SM00382 33 228 9.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 Pfam PF00005 ABC transporter 24 172 6.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 SUPERFAMILY SSF52540 8 242 7.66E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 Gene3D G3DSA:3.40.50.300 1 248 6.8E-73 T 14-10-2018 DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 PIRSF PIRSF039085 5 248 2.0E-103 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DKL56_00590 f641b5937be5c475c6bd50a20bed300f 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_01475 4131a4cf02a62f2d9a28b8ea329a63b8 156 Pfam PF03830 PTS system sorbose subfamily IIB component 2 148 1.3E-44 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_01475 4131a4cf02a62f2d9a28b8ea329a63b8 156 Gene3D G3DSA:3.40.35.10 1 156 1.7E-46 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_01475 4131a4cf02a62f2d9a28b8ea329a63b8 156 SUPERFAMILY SSF52728 1 155 1.14E-43 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_05585 cf3b8fd76018e4013bc1481e2867dab4 215 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 30.736 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DKL56_05585 cf3b8fd76018e4013bc1481e2867dab4 215 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 199 1.2E-57 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DKL56_05585 cf3b8fd76018e4013bc1481e2867dab4 215 Pfam PF02223 Thymidylate kinase 8 199 6.2E-51 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DKL56_05585 cf3b8fd76018e4013bc1481e2867dab4 215 SUPERFAMILY SSF52540 1 212 6.55E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05585 cf3b8fd76018e4013bc1481e2867dab4 215 Gene3D G3DSA:3.40.50.300 1 211 1.1E-63 T 14-10-2018 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 99 117 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 SUPERFAMILY SSF51395 14 325 9.16E-87 T 14-10-2018 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 7 324 3.6E-117 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 Gene3D G3DSA:3.20.20.70 11 253 5.7E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 Pfam PF01207 Dihydrouridine synthase (Dus) 18 321 2.0E-94 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 PIRSF PIRSF006621 4 333 1.7E-103 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DKL56_06230 9eb6ac49344be83e4d60fd45d73ec3c1 336 Gene3D G3DSA:1.10.1200.80 257 333 8.6E-13 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DKL56_02110 1619fdee5e6d173cbc2a54f38316d602 177 SUPERFAMILY SSF109854 47 157 2.59E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DKL56_02110 1619fdee5e6d173cbc2a54f38316d602 177 Gene3D G3DSA:1.20.120.450 1 177 1.1E-60 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DKL56_02110 1619fdee5e6d173cbc2a54f38316d602 177 Pfam PF08020 Protein of unknown function (DUF1706) 1 174 4.1E-58 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 DKL56_02110 1619fdee5e6d173cbc2a54f38316d602 177 PIRSF PIRSF031551 1 177 5.4E-58 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 DKL56_03800 949fdfd416799bc6e9c5cbe4c9b14a49 181 Gene3D G3DSA:3.40.80.10 4 181 2.0E-43 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_03800 949fdfd416799bc6e9c5cbe4c9b14a49 181 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 19 150 5.6E-14 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_03800 949fdfd416799bc6e9c5cbe4c9b14a49 181 SUPERFAMILY SSF55846 15 169 5.04E-26 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_03800 949fdfd416799bc6e9c5cbe4c9b14a49 181 SMART SM00644 10 151 1.5E-17 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DKL56_03450 ae31a449bbc19a5db38ff0f27d160fb8 113 Pfam PF08866 Putative amino acid metabolism 2 108 4.2E-39 T 14-10-2018 IPR014965 Putative amino acid metabolism DKL56_03450 ae31a449bbc19a5db38ff0f27d160fb8 113 Gene3D G3DSA:3.30.1820.10 1 111 8.2E-37 T 14-10-2018 IPR035942 Lp2179-like superfamily DKL56_03450 ae31a449bbc19a5db38ff0f27d160fb8 113 SUPERFAMILY SSF160800 1 109 8.89E-40 T 14-10-2018 IPR035942 Lp2179-like superfamily DKL56_00705 83880d7b8498148e68294ebb4bd6172f 374 Pfam PF07907 YibE/F-like protein 128 359 9.0E-57 T 14-10-2018 IPR012507 YibE/F-like DKL56_07550 3610050af3f1fd2bb75f6ffa44b82da4 242 SUPERFAMILY SSF52317 27 239 9.54E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_07550 3610050af3f1fd2bb75f6ffa44b82da4 242 Gene3D G3DSA:3.40.50.880 1 242 7.3E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DKL56_07550 3610050af3f1fd2bb75f6ffa44b82da4 242 Pfam PF07722 Peptidase C26 4 219 4.4E-63 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 9.0E-43 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 Gene3D G3DSA:3.40.50.720 4 320 1.2E-107 T 14-10-2018 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 Gene3D G3DSA:3.40.50.720 102 298 1.2E-107 T 14-10-2018 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 SUPERFAMILY SSF51735 102 300 1.7E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 329 3.2E-26 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DKL56_01380 db692389c26c52c0424985ad5a4b1dcb 332 SUPERFAMILY SSF52283 1 133 1.64E-33 T 14-10-2018 DKL56_05735 735b29f89218269eee717e4e2800f390 102 SUPERFAMILY SSF55729 31 94 1.69E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_05735 735b29f89218269eee717e4e2800f390 102 Gene3D G3DSA:3.40.630.30 4 98 1.4E-7 T 14-10-2018 DKL56_00220 8473f08198e2b26f73071a797274b37a 407 Pfam PF12698 ABC-2 family transporter protein 19 375 8.3E-42 T 14-10-2018 DKL56_06545 6fd96756243ceff63c70ef04aa02772c 165 Gene3D G3DSA:3.40.50.850 4 165 7.4E-30 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DKL56_06545 6fd96756243ceff63c70ef04aa02772c 165 SUPERFAMILY SSF52499 8 163 2.22E-30 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DKL56_06545 6fd96756243ceff63c70ef04aa02772c 165 Pfam PF00857 Isochorismatase family 14 139 2.0E-21 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DKL56_02690 1b4028eab8111816229c0c66b1af8b9a 478 Pfam PF13457 SH3-like domain 6 66 1.6E-4 T 14-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 DKL56_01465 9db9483d60814bee53e31d64d04f3c5f 331 SUPERFAMILY SSF53697 4 294 3.12E-28 T 14-10-2018 DKL56_01465 9db9483d60814bee53e31d64d04f3c5f 331 Gene3D G3DSA:1.10.10.2240 157 310 2.9E-46 T 14-10-2018 DKL56_01465 9db9483d60814bee53e31d64d04f3c5f 331 Gene3D G3DSA:3.40.50.10490 1 135 1.9E-19 T 14-10-2018 DKL56_01465 9db9483d60814bee53e31d64d04f3c5f 331 Gene3D G3DSA:3.40.50.12570 193 287 2.9E-46 T 14-10-2018 DKL56_05920 10eec2eb15b2b98cdf2d8b43075b7a5a 366 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 11 338 1.1E-47 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DKL56_03245 d1a6a009cc9a3967df2a26b0b6934737 97 Pfam PF01809 Haemolytic domain 2 68 1.7E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DKL56_03245 d1a6a009cc9a3967df2a26b0b6934737 97 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.168 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DKL56_03245 d1a6a009cc9a3967df2a26b0b6934737 97 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 4.7E-28 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DKL56_03245 d1a6a009cc9a3967df2a26b0b6934737 97 SMART SM01234 1 68 1.7E-39 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DKL56_03245 d1a6a009cc9a3967df2a26b0b6934737 97 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 7.0E-19 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DKL56_00340 c64ed30c34ee00a05dca58ed1944345b 375 Gene3D G3DSA:3.40.710.10 31 362 3.0E-39 T 14-10-2018 DKL56_00340 c64ed30c34ee00a05dca58ed1944345b 375 Pfam PF00144 Beta-lactamase 47 362 8.1E-28 T 14-10-2018 IPR001466 Beta-lactamase-related DKL56_00340 c64ed30c34ee00a05dca58ed1944345b 375 SUPERFAMILY SSF56601 37 366 2.54E-49 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 SUPERFAMILY SSF55486 21 649 5.13E-187 T 14-10-2018 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 449 461 5.0E-20 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 488 504 5.0E-20 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 558 569 5.0E-20 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 467 479 5.0E-20 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 Gene3D G3DSA:1.10.1380.10 49 444 1.1E-174 T 14-10-2018 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 Gene3D G3DSA:3.40.390.10 21 649 1.1E-174 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 Pfam PF01431 Peptidase family M13 457 646 6.3E-56 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 DKL56_07135 e3c5ce590dcf8bc6ff968c21034498ad 649 Pfam PF05649 Peptidase family M13 23 400 4.9E-76 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 DKL56_02130 3274446446a93f1aa144a0036e49c886 381 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 70 375 2.0E-53 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DKL56_02130 3274446446a93f1aa144a0036e49c886 381 Gene3D G3DSA:3.40.50.12580 178 364 2.5E-33 T 14-10-2018 DKL56_02130 3274446446a93f1aa144a0036e49c886 381 SUPERFAMILY SSF53756 45 378 9.52E-11 T 14-10-2018 DKL56_07640 ce956ddfc1dd3ca9e46245203e54ad21 185 SUPERFAMILY SSF46689 7 67 9.23E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_07640 ce956ddfc1dd3ca9e46245203e54ad21 185 Gene3D G3DSA:1.10.10.60 6 52 2.7E-5 T 14-10-2018 DKL56_07640 ce956ddfc1dd3ca9e46245203e54ad21 185 Gene3D G3DSA:1.10.357.10 53 184 9.1E-8 T 14-10-2018 DKL56_07680 1971549667e64c0003c411611cb4a97f 244 Pfam PF06161 Protein of unknown function (DUF975) 13 155 2.1E-12 T 14-10-2018 IPR010380 Protein of unknown function DUF975 DKL56_07680 1971549667e64c0003c411611cb4a97f 244 Pfam PF06161 Protein of unknown function (DUF975) 147 238 1.7E-30 T 14-10-2018 IPR010380 Protein of unknown function DUF975 DKL56_03205 170dd5b0a44c8cec00dc0c882da581eb 170 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 23 167 1.3E-33 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DKL56_03205 170dd5b0a44c8cec00dc0c882da581eb 170 SUPERFAMILY SSF81573 75 133 9.02E-5 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DKL56_03205 170dd5b0a44c8cec00dc0c882da581eb 170 Pfam PF00430 ATP synthase B/B' CF(0) 20 148 3.4E-29 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DKL56_03205 170dd5b0a44c8cec00dc0c882da581eb 170 Hamap MF_01398 ATP synthase subunit b [atpF]. 8 150 12.969 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DKL56_03235 be8dff9d4df622b5d6274f36287b033a 76 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 9 76 4.9E-12 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 DKL56_03235 be8dff9d4df622b5d6274f36287b033a 76 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 6.7E-16 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 DKL56_03345 46b09f320ed5af8c71361fb73e9b5f9d 108 Pfam PF11877 Protein of unknown function (DUF3397) 1 108 6.2E-22 T 14-10-2018 IPR024515 Protein of unknown function DUF3397 DKL56_01970 30e65bd98c57369f46157717d9eb3849 453 Pfam PF02378 Phosphotransferase system, EIIC 36 372 4.8E-47 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DKL56_01970 30e65bd98c57369f46157717d9eb3849 453 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 446 4.7E-86 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DKL56_01970 30e65bd98c57369f46157717d9eb3849 453 PIRSF PIRSF006351 4 452 3.3E-113 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DKL56_00805 734cde46a467395823284dbbf8f83004 211 SUPERFAMILY SSF55486 62 210 1.47E-22 T 14-10-2018 DKL56_00805 734cde46a467395823284dbbf8f83004 211 Gene3D G3DSA:3.40.390.10 32 211 4.8E-21 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 DKL56_00805 734cde46a467395823284dbbf8f83004 211 Pfam PF00413 Matrixin 86 209 3.3E-9 T 14-10-2018 IPR001818 Peptidase M10, metallopeptidase GO:0004222|GO:0006508|GO:0008270|GO:0031012 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 423 440 1.3E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 448 460 1.3E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 386 1.3E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 402 413 1.3E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 PRINTS PR00131 Glycosyl hydrolase family 1 signature 312 326 1.3E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 Gene3D G3DSA:3.20.20.80 1 485 1.3E-152 T 14-10-2018 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 Pfam PF00232 Glycosyl hydrolase family 1 6 483 1.2E-129 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DKL56_03150 15a737fd8d26413412cf7709063797f7 486 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DKL56_03150 15a737fd8d26413412cf7709063797f7 486 SUPERFAMILY SSF51445 3 479 1.18E-154 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DKL56_03385 a917f0c9e31e298448c28becee8eb6e8 283 Pfam PF08478 POTRA domain, FtsQ-type 76 145 1.5E-6 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type DKL56_03385 a917f0c9e31e298448c28becee8eb6e8 283 Gene3D G3DSA:3.40.50.10960 143 259 1.3E-18 T 14-10-2018 DKL56_03385 a917f0c9e31e298448c28becee8eb6e8 283 Hamap MF_00912 Cell division protein DivIB [divIB]. 23 277 24.575 T 14-10-2018 IPR026580 Cell division protein DivIB DKL56_06730 18bd1eaa8da5c8a455bf60e6704159d3 107 SUPERFAMILY SSF117782 4 105 9.55E-35 T 14-10-2018 IPR035439 UPF0145 domain superfamily DKL56_06730 18bd1eaa8da5c8a455bf60e6704159d3 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 4 105 23.401 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DKL56_06730 18bd1eaa8da5c8a455bf60e6704159d3 107 Pfam PF01906 Putative heavy-metal-binding 4 104 4.9E-38 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 DKL56_06730 18bd1eaa8da5c8a455bf60e6704159d3 107 Gene3D G3DSA:3.30.110.70 4 107 2.9E-31 T 14-10-2018 DKL56_07145 872ea9d14dbe1f599f83c4419788b6ec 420 SUPERFAMILY SSF56059 120 322 1.21E-20 T 14-10-2018 DKL56_07145 872ea9d14dbe1f599f83c4419788b6ec 420 Gene3D G3DSA:3.30.470.20 112 367 6.4E-8 T 14-10-2018 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 127 1.2E-44 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 SUPERFAMILY SSF64263 2 127 1.57E-41 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 Gene3D G3DSA:3.90.1030.10 1 127 1.2E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 127 26.564 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_06015 6eb64c7933f4f6f5b3f7841a99780a1b 127 Pfam PF01196 Ribosomal protein L17 16 127 1.8E-38 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03280 0c10e1c48da0e7131e6abbcd437dc91f 157 Gene3D G3DSA:3.30.1330.30 1 133 5.7E-32 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_03280 0c10e1c48da0e7131e6abbcd437dc91f 157 SUPERFAMILY SSF160515 3 131 9.02E-33 T 14-10-2018 DKL56_03280 0c10e1c48da0e7131e6abbcd437dc91f 157 Pfam PF07997 Protein of unknown function (DUF1694) 3 121 3.1E-33 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 SUPERFAMILY SSF82607 15 107 4.19E-27 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 11 108 1.3E-23 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 PIRSF PIRSF004555 11 109 3.5E-28 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 Pfam PF02575 YbaB/EbfC DNA-binding family 19 108 1.3E-26 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 20.37 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DKL56_05600 8542d7f179e2de5b73a65e7ab3589011 109 Gene3D G3DSA:3.30.1310.10 9 109 1.8E-27 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DKL56_00710 a42302f4f54ecbc2c000cab154598401 253 Pfam PF07907 YibE/F-like protein 4 243 2.5E-51 T 14-10-2018 IPR012507 YibE/F-like DKL56_00710 a42302f4f54ecbc2c000cab154598401 253 PIRSF PIRSF031503 1 253 7.9E-61 T 14-10-2018 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane DKL56_01135 088a4c823ebdb578ca653ba7e5a673bc 274 SUPERFAMILY SSF161098 5 274 3.55E-61 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_01135 088a4c823ebdb578ca653ba7e5a673bc 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 3.9E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_01135 088a4c823ebdb578ca653ba7e5a673bc 274 Gene3D G3DSA:1.10.3720.10 1 265 5.1E-59 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 SUPERFAMILY SSF46785 1 105 3.6E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.0E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 Gene3D G3DSA:1.10.10.10 1 90 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 Pfam PF03466 LysR substrate binding domain 92 253 3.1E-11 T 14-10-2018 IPR005119 LysR, substrate-binding DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 Gene3D G3DSA:3.40.190.290 92 286 1.3E-15 T 14-10-2018 DKL56_05280 b9ca9df7f984d2ec8dbb38c4de92fb43 306 SUPERFAMILY SSF53850 92 254 4.71E-13 T 14-10-2018 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 Gene3D G3DSA:1.20.5.1150 16 54 1.8E-18 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 Pfam PF01165 Ribosomal protein S21 5 56 1.0E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 56 1.0E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.2E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 9.2E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 9.2E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 9.2E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 9.2E-14 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DKL56_04160 3681ca626da070fb8fac8531e0175384 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 23.433 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_03610 269d1f2ab689ee97431ac2fe4d580351 639 Pfam PF01757 Acyltransferase family 10 325 5.4E-21 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DKL56_03610 269d1f2ab689ee97431ac2fe4d580351 639 SUPERFAMILY SSF52266 481 635 4.0E-13 T 14-10-2018 DKL56_03610 269d1f2ab689ee97431ac2fe4d580351 639 Gene3D G3DSA:3.40.50.1110 463 635 9.7E-9 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 Hamap MF_01151 Protein GrpE [grpE]. 14 193 19.9 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 Gene3D G3DSA:2.30.22.10 136 193 3.1E-23 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 Gene3D G3DSA:3.90.20.20 2 135 4.9E-23 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 PRINTS PR00773 GrpE protein signature 144 159 2.0E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 PRINTS PR00773 GrpE protein signature 90 105 2.0E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 PRINTS PR00773 GrpE protein signature 62 78 2.0E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 PRINTS PR00773 GrpE protein signature 172 191 2.0E-25 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 SUPERFAMILY SSF51064 138 193 1.18E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 SUPERFAMILY SSF58014 41 136 4.05E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 Pfam PF01025 GrpE 30 193 1.3E-49 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_04450 0d0364bae91e9aed12958b4bf207a1d2 193 ProSitePatterns PS01071 grpE protein signature. 147 191 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DKL56_06780 e22306441c184418dba86d2b047e8c64 96 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 88 7.8E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DKL56_06780 e22306441c184418dba86d2b047e8c64 96 SUPERFAMILY SSF52794 1 93 4.19E-18 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DKL56_06780 e22306441c184418dba86d2b047e8c64 96 Gene3D G3DSA:3.40.50.2300 1 95 8.3E-26 T 14-10-2018 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 61 2.1E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.6E-38 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.6E-38 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.6E-38 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 1.6E-38 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.6E-38 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 157 1.9E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 64 0.001 T 14-10-2018 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 Pfam PF01467 Cytidylyltransferase-like 5 134 1.0E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 Gene3D G3DSA:3.40.50.620 1 164 4.9E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 SUPERFAMILY SSF52374 1 157 5.33E-37 T 14-10-2018 DKL56_03535 9b428659ab70d8103d13672bf97f10bd 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 159 32.075 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DKL56_03475 3e36a5f8e9fe2e91cfe301bb88f2184d 122 Pfam PF08861 Domain of unknown function DUF1828 35 118 8.8E-8 T 14-10-2018 IPR014960 Domain of unknown function DUF1828 DKL56_00410 9de666c3e6866e9586e2c072f9bc5495 281 Gene3D G3DSA:3.90.550.10 1 274 1.7E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_00410 9de666c3e6866e9586e2c072f9bc5495 281 Pfam PF01501 Glycosyl transferase family 8 2 249 4.8E-18 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DKL56_00410 9de666c3e6866e9586e2c072f9bc5495 281 SUPERFAMILY SSF53448 1 248 3.94E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_07240 072adb88d3fc3663ff3cf06d12c9df4e 286 SUPERFAMILY SSF47413 1 61 1.03E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_07240 072adb88d3fc3663ff3cf06d12c9df4e 286 Gene3D G3DSA:1.25.40.10 1 281 3.3E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 Gene3D G3DSA:1.10.10.60 283 335 9.1E-18 T 14-10-2018 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 Gene3D G3DSA:1.10.10.60 230 282 2.7E-13 T 14-10-2018 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 316 332 4.5E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 301 316 4.5E-8 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 SUPERFAMILY SSF46689 286 334 5.38E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 Pfam PF12833 Helix-turn-helix domain 255 333 1.1E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 286 328 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DKL56_03085 7ee6f260268c5398719f7ca6c06a1095 336 SMART SM00342 249 332 2.2E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DKL56_07620 6c8d085397f1850e0b05da6094688a4f 262 Pfam PF03609 PTS system sorbose-specific iic component 5 235 1.1E-64 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_03760 33393995936ae904e3a3df0f39c0e5cf 76 SUPERFAMILY SSF140652 4 73 1.16E-28 T 14-10-2018 IPR036806 YozE SAM-like superfamily DKL56_03760 33393995936ae904e3a3df0f39c0e5cf 76 Gene3D G3DSA:1.10.150.260 4 74 1.1E-23 T 14-10-2018 IPR036806 YozE SAM-like superfamily DKL56_03760 33393995936ae904e3a3df0f39c0e5cf 76 PIRSF PIRSF037262 3 75 5.6E-33 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 DKL56_03760 33393995936ae904e3a3df0f39c0e5cf 76 Hamap MF_01538 UPF0346 protein . 3 73 22.941 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 DKL56_03760 33393995936ae904e3a3df0f39c0e5cf 76 Pfam PF06855 YozE SAM-like fold 6 71 4.7E-27 T 14-10-2018 IPR023089 YozE SAM-like domain DKL56_00995 0b974f9b74911097d038dc71dd1bb30f 323 Pfam PF04392 ABC transporter substrate binding protein 36 315 4.4E-87 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DKL56_00995 0b974f9b74911097d038dc71dd1bb30f 323 Gene3D G3DSA:3.40.50.2300 149 316 3.7E-90 T 14-10-2018 DKL56_00995 0b974f9b74911097d038dc71dd1bb30f 323 SUPERFAMILY SSF53822 48 291 7.25E-14 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DKL56_00995 0b974f9b74911097d038dc71dd1bb30f 323 Gene3D G3DSA:3.40.50.2300 46 299 3.7E-90 T 14-10-2018 DKL56_00990 d406842b85c82d53f04ed9e45b2bcce8 305 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 281 2.5E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DKL56_02525 8d41c7583cd04824686edb93860e3d47 400 Pfam PF01594 AI-2E family transporter 27 364 9.7E-70 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Gene3D G3DSA:3.40.50.300 144 273 1.1E-9 T 14-10-2018 DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Gene3D G3DSA:3.40.50.300 1 119 1.9E-14 T 14-10-2018 DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 2 1176 37.243 T 14-10-2018 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Gene3D G3DSA:3.40.50.300 274 382 4.2E-17 T 14-10-2018 DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Gene3D G3DSA:3.40.50.300 533 684 8.9E-20 T 14-10-2018 DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 SUPERFAMILY SSF52540 293 680 8.29E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_04005 a7301d770431c1e7465bc3e6d39198f8 1178 Pfam PF12705 PD-(D/E)XK nuclease superfamily 789 1127 1.9E-26 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DKL56_06435 29bbd321580f517e807685513398fd70 471 Pfam PF03577 Peptidase family C69 6 400 1.5E-157 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 DKL56_00235 c3d68c04a5e8266d68b166e12813b5b4 256 Pfam PF06182 ABC-2 family transporter protein 54 246 7.2E-13 T 14-10-2018 IPR010390 Protein of unknown function DUF990 DKL56_01375 3aad25491eaa08cdc7f864905d70d616 260 Pfam PF03609 PTS system sorbose-specific iic component 2 234 1.1E-63 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 2 190 4.1E-96 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 89 100 - T 14-10-2018 IPR018215 ClpP, Ser active site DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 192 42.108 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 1.4E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 1.4E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 PRINTS PR00127 Clp protease catalytic subunit P signature 110 129 1.4E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 1.4E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 1.4E-47 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 Gene3D G3DSA:3.90.226.10 1 193 6.5E-80 T 14-10-2018 DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 Pfam PF00574 Clp protease 12 191 3.8E-82 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 SUPERFAMILY SSF52096 10 189 6.09E-70 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DKL56_02685 f09162a1dd335b2eb87d069d6b74f739 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 111 124 - T 14-10-2018 IPR033135 ClpP, histidine active site DKL56_01085 9e5dea82f259fe97a0c5719e1dcfb4e1 417 SUPERFAMILY SSF53448 46 315 1.38E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_01085 9e5dea82f259fe97a0c5719e1dcfb4e1 417 Pfam PF13632 Glycosyl transferase family group 2 145 334 1.2E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DKL56_01085 9e5dea82f259fe97a0c5719e1dcfb4e1 417 Gene3D G3DSA:3.90.550.10 37 261 2.7E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DKL56_01275 2f5637837905e4d9bf70b90e2857f428 304 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 303 5.4E-112 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_00785 d851616cfef4182413ef7d8ce642377e 260 SUPERFAMILY SSF52540 3 256 1.94E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_00785 d851616cfef4182413ef7d8ce642377e 260 Pfam PF00005 ABC transporter 21 184 2.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_00785 d851616cfef4182413ef7d8ce642377e 260 Gene3D G3DSA:3.40.50.300 1 257 6.0E-59 T 14-10-2018 DKL56_00785 d851616cfef4182413ef7d8ce642377e 260 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 256 4.9E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal DKL56_00785 d851616cfef4182413ef7d8ce642377e 260 SMART SM00382 29 233 2.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 21.431 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.2E-37 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 SUPERFAMILY SSF52080 4 144 4.06E-48 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 Gene3D G3DSA:3.100.10.10 66 146 2.5E-25 T 14-10-2018 DKL56_06055 4727e208e09f2d4f75aeb3c90d1dca56 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 144 2.5E-53 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_05780 711d33ca5fafe0225eb0828d97f01dfe 253 Pfam PF01925 Sulfite exporter TauE/SafE 11 244 1.1E-33 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DKL56_04155 a0505191b4d9543c9b88cfb371edc2e0 147 Gene3D G3DSA:1.10.10.410 91 147 2.3E-22 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DKL56_04155 a0505191b4d9543c9b88cfb371edc2e0 147 SUPERFAMILY SSF89095 2 147 1.31E-40 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DKL56_04155 a0505191b4d9543c9b88cfb371edc2e0 147 Gene3D G3DSA:1.10.1510.10 1 90 1.4E-28 T 14-10-2018 DKL56_04155 a0505191b4d9543c9b88cfb371edc2e0 147 Pfam PF09424 Yqey-like protein 5 146 1.5E-50 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DKL56_05470 5de2d1a29fa2ca1d0832dc4a270d2731 145 SMART SM01323 14 97 9.5E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC DKL56_05470 5de2d1a29fa2ca1d0832dc4a270d2731 145 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 15 97 7.7E-21 T 14-10-2018 IPR003849 Preprotein translocase YajC DKL56_05470 5de2d1a29fa2ca1d0832dc4a270d2731 145 PRINTS PR01853 Bacterial YajC preprotein translocase signature 36 54 1.0E-9 T 14-10-2018 IPR003849 Preprotein translocase YajC DKL56_05470 5de2d1a29fa2ca1d0832dc4a270d2731 145 PRINTS PR01853 Bacterial YajC preprotein translocase signature 16 36 1.0E-9 T 14-10-2018 IPR003849 Preprotein translocase YajC DKL56_05470 5de2d1a29fa2ca1d0832dc4a270d2731 145 Pfam PF02699 Preprotein translocase subunit 18 95 9.5E-24 T 14-10-2018 IPR003849 Preprotein translocase YajC DKL56_02565 f7f4122c51d69aa2fcba72157bb4d286 207 Gene3D G3DSA:1.10.3720.10 9 203 1.3E-32 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02565 f7f4122c51d69aa2fcba72157bb4d286 207 SUPERFAMILY SSF161098 11 195 3.27E-38 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02565 f7f4122c51d69aa2fcba72157bb4d286 207 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 202 6.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02950 76c27b219926de3c31b4c3acfef751f4 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 21 6.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 SUPERFAMILY SSF51430 9 273 6.81E-80 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 PRINTS PR00069 Aldo-keto reductase signature 125 142 9.5E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 PRINTS PR00069 Aldo-keto reductase signature 38 62 9.5E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 PRINTS PR00069 Aldo-keto reductase signature 95 113 9.5E-14 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 Pfam PF00248 Aldo/keto reductase family 14 269 2.4E-57 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 Gene3D G3DSA:3.20.20.100 2 282 3.3E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 PIRSF PIRSF000097 1 117 2.3E-23 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_02125 3f4a47e119a509454e3a0f31cb70e315 282 PIRSF PIRSF000097 113 279 2.0E-22 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_04090 2ea4706da7cacbb8f2289bbde2b5b3c4 265 SUPERFAMILY SSF102705 1 262 7.46E-82 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DKL56_04090 2ea4706da7cacbb8f2289bbde2b5b3c4 265 Gene3D G3DSA:3.40.1390.30 101 223 2.1E-71 T 14-10-2018 DKL56_04090 2ea4706da7cacbb8f2289bbde2b5b3c4 265 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 241 2.0E-74 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DKL56_04090 2ea4706da7cacbb8f2289bbde2b5b3c4 265 Gene3D G3DSA:3.40.1390.30 8 234 2.1E-71 T 14-10-2018 DKL56_04090 2ea4706da7cacbb8f2289bbde2b5b3c4 265 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 260 7.6E-61 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DKL56_00015 56f26c047942bb1574ca540dc89c8a82 73 Pfam PF13275 S4 domain 9 71 1.7E-27 T 14-10-2018 DKL56_00015 56f26c047942bb1574ca540dc89c8a82 73 SUPERFAMILY SSF55174 5 72 9.03E-20 T 14-10-2018 DKL56_00015 56f26c047942bb1574ca540dc89c8a82 73 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 8 66 1.5E-29 T 14-10-2018 IPR014330 RNA-binding S4-related,YaaA DKL56_00015 56f26c047942bb1574ca540dc89c8a82 73 Gene3D G3DSA:3.10.290.10 2 72 5.4E-25 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DKL56_00540 507f98687817dad5b6d107a5d74751d3 120 Gene3D G3DSA:2.60.300.12 5 120 1.4E-38 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DKL56_00540 507f98687817dad5b6d107a5d74751d3 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 8 116 5.9E-24 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DKL56_00540 507f98687817dad5b6d107a5d74751d3 120 SUPERFAMILY SSF89360 8 117 1.57E-24 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DKL56_01645 ae275a634ee7006462174d1201ce88f7 456 Gene3D G3DSA:3.20.20.190 21 257 1.2E-53 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DKL56_01645 ae275a634ee7006462174d1201ce88f7 456 SUPERFAMILY SSF51695 23 256 1.02E-54 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DKL56_01645 ae275a634ee7006462174d1201ce88f7 456 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 28 251 1.6E-28 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DKL56_05255 d0bf0d9d7f130b02a6621325867e235a 273 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 270 1.1E-86 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_01195 5be034ead0d8eadfca0bb1880da4b20e 344 ProDom PD057827 ZN-RIBBON HI1126 PM0127 TRANSMEMBRANE ORF196EGC129 MEMBRANE SO2423 GLL0157 4 30 3.0E-6 T 14-10-2018 DKL56_00810 65859b9f6f91e0d815e7599004a9d15e 764 Gene3D G3DSA:3.40.50.300 596 764 4.0E-49 T 14-10-2018 DKL56_00810 65859b9f6f91e0d815e7599004a9d15e 764 SUPERFAMILY SSF52540 203 750 4.35E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_02260 df9a4b2becab22d75743ea42ed7ceb93 188 SUPERFAMILY SSF48150 6 187 7.61E-76 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DKL56_02260 df9a4b2becab22d75743ea42ed7ceb93 188 Gene3D G3DSA:1.10.340.30 5 188 9.4E-81 T 14-10-2018 DKL56_02260 df9a4b2becab22d75743ea42ed7ceb93 188 Pfam PF03352 Methyladenine glycosylase 10 185 5.8E-78 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DKL56_00815 347480386e0557033935560c62896f80 149 Pfam PF13673 Acetyltransferase (GNAT) domain 29 148 6.0E-18 T 14-10-2018 IPR000182 GNAT domain DKL56_00815 347480386e0557033935560c62896f80 149 Gene3D G3DSA:3.40.630.30 4 146 8.4E-33 T 14-10-2018 DKL56_00815 347480386e0557033935560c62896f80 149 SUPERFAMILY SSF55729 9 148 2.3E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DKL56_00895 c18955705d3d2a4b495019929ab23272 309 Gene3D G3DSA:3.10.520.20 3 308 1.6E-85 T 14-10-2018 DKL56_00895 c18955705d3d2a4b495019929ab23272 309 PIRSF PIRSF006268 1 309 2.9E-82 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DKL56_00895 c18955705d3d2a4b495019929ab23272 309 SUPERFAMILY SSF143631 11 301 2.43E-79 T 14-10-2018 IPR003374 ApbE-like superfamily DKL56_00895 c18955705d3d2a4b495019929ab23272 309 Pfam PF02424 ApbE family 18 279 1.0E-64 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 DKL56_01100 9b27f66d4968e4e68e7e188e3e58f268 211 Gene3D G3DSA:3.30.240.20 155 211 2.9E-13 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DKL56_01100 9b27f66d4968e4e68e7e188e3e58f268 211 Pfam PF04239 Protein of unknown function (DUF421) 88 188 2.4E-33 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DKL56_01100 9b27f66d4968e4e68e7e188e3e58f268 211 Gene3D G3DSA:3.30.240.20 80 154 7.8E-20 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DKL56_06325 b68cac67520310c2a5420d86c35db9aa 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 213 8.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_06325 b68cac67520310c2a5420d86c35db9aa 219 SUPERFAMILY SSF161098 12 198 3.53E-35 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06325 b68cac67520310c2a5420d86c35db9aa 219 Gene3D G3DSA:1.10.3720.10 1 216 8.8E-42 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_06325 b68cac67520310c2a5420d86c35db9aa 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 105 1.8E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DKL56_01200 5897e8e38db92ece4ccbb5068dbe0980 458 SUPERFAMILY SSF53720 4 452 9.16E-128 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DKL56_01200 5897e8e38db92ece4ccbb5068dbe0980 458 Gene3D G3DSA:3.40.605.10 11 437 2.9E-145 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DKL56_01200 5897e8e38db92ece4ccbb5068dbe0980 458 Gene3D G3DSA:3.40.309.10 232 421 2.9E-145 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DKL56_01200 5897e8e38db92ece4ccbb5068dbe0980 458 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DKL56_01200 5897e8e38db92ece4ccbb5068dbe0980 458 Pfam PF00171 Aldehyde dehydrogenase family 3 448 7.5E-124 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DKL56_00855 00cede6ee7db61c2c9e4f917d9de2006 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 54 3.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_00855 00cede6ee7db61c2c9e4f917d9de2006 173 SUPERFAMILY SSF46689 11 74 3.49E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_00855 00cede6ee7db61c2c9e4f917d9de2006 173 Gene3D G3DSA:1.10.357.10 1 173 6.7E-37 T 14-10-2018 DKL56_07300 305cf1c8c64a65e662e56342120e196f 357 SUPERFAMILY SSF56266 12 329 1.78E-89 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DKL56_07300 305cf1c8c64a65e662e56342120e196f 357 Pfam PF03576 Peptidase family S58 20 330 6.6E-101 T 14-10-2018 IPR005321 Peptidase S58, DmpA DKL56_07300 305cf1c8c64a65e662e56342120e196f 357 Gene3D G3DSA:3.60.70.12 5 346 2.6E-117 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DKL56_04305 109aaf984ff483bdc24fbbdfc9977748 233 Gene3D G3DSA:1.10.3720.10 23 231 2.4E-42 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04305 109aaf984ff483bdc24fbbdfc9977748 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 228 4.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_04305 109aaf984ff483bdc24fbbdfc9977748 233 SUPERFAMILY SSF161098 22 217 4.06E-39 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04645 8c8964f2ccd5f320cd02dbedb9e358c3 474 Pfam PF03577 Peptidase family C69 6 403 2.3E-151 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 DKL56_01480 ad7813c6fc9501b719d109522fddfc99 262 Pfam PF03609 PTS system sorbose-specific iic component 2 235 1.2E-72 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_05155 40a990e5d83c6d487e7eeefa1277075c 411 Pfam PF03217 SLAP domain 41 98 2.2E-6 T 14-10-2018 IPR024968 SLAP domain DKL56_05155 40a990e5d83c6d487e7eeefa1277075c 411 Pfam PF07554 FIVAR domain 330 382 2.2E-6 T 14-10-2018 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 Gene3D G3DSA:3.40.50.1240 2 230 2.9E-81 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 SMART SM00855 3 189 1.9E-26 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 PIRSF PIRSF000709 2 114 2.7E-9 T 14-10-2018 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 PIRSF PIRSF000709 173 225 0.26 T 14-10-2018 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 SUPERFAMILY SSF53254 1 221 9.43E-73 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 44.071 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 136 2.3E-28 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_07045 9a0082004365bd97c4c858e403c921f6 230 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 228 1.3E-108 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 DKL56_07735 34cccff1e5385567fbcc7397fbeddec1 225 Pfam PF02517 CAAX protease self-immunity 136 221 2.4E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DKL56_01210 21089d34331b01d4748bd244b616c774 201 Pfam PF09335 SNARE associated Golgi protein 70 187 2.1E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein DKL56_00745 289827e99bbc0d69e1337b71a91af706 262 SUPERFAMILY SSF54197 21 130 6.24E-22 T 14-10-2018 IPR036265 HIT-like superfamily DKL56_00745 289827e99bbc0d69e1337b71a91af706 262 Gene3D G3DSA:3.30.428.10 29 132 2.1E-11 T 14-10-2018 IPR036265 HIT-like superfamily DKL56_00745 289827e99bbc0d69e1337b71a91af706 262 PIRSF PIRSF031505 1 260 2.9E-97 T 14-10-2018 IPR012361 Galactose-1-phosphate uridylyltransferase, short form, putative DKL56_00745 289827e99bbc0d69e1337b71a91af706 262 Pfam PF16285 Domain of unknown function (DUF4931) 8 249 1.0E-81 T 14-10-2018 DKL56_07635 f73cf4648caf357bc61044049de26c8c 249 Pfam PF01925 Sulfite exporter TauE/SafE 6 246 7.6E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DKL56_00245 2097e68c490cf8ccf5de016ea484e1af 228 Gene3D G3DSA:1.20.1290.10 5 225 2.6E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_00245 2097e68c490cf8ccf5de016ea484e1af 228 SUPERFAMILY SSF69118 30 223 3.96E-25 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DKL56_00245 2097e68c490cf8ccf5de016ea484e1af 228 Pfam PF02627 Carboxymuconolactone decarboxylase family 141 218 9.0E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DKL56_05655 f6003a3d56f15507a3ba0c2d0c664a74 297 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 285 1.7E-79 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DKL56_05655 f6003a3d56f15507a3ba0c2d0c664a74 297 SUPERFAMILY SSF161098 16 276 4.32E-39 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_05655 f6003a3d56f15507a3ba0c2d0c664a74 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 292 1.7E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_05655 f6003a3d56f15507a3ba0c2d0c664a74 297 Gene3D G3DSA:1.10.3720.10 48 294 1.2E-35 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00890 0c4244e2a006fdd7f1fd39a5f1b4fbde 263 Gene3D G3DSA:3.90.190.10 8 262 3.7E-53 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_00890 0c4244e2a006fdd7f1fd39a5f1b4fbde 263 SUPERFAMILY SSF52799 7 261 6.53E-50 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like DKL56_00890 0c4244e2a006fdd7f1fd39a5f1b4fbde 263 Pfam PF13350 Tyrosine phosphatase family 8 262 1.7E-56 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type DKL56_06460 217165d0e4ce6328546f0919de5c4b4d 162 SUPERFAMILY SSF52728 8 161 2.88E-49 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_06460 217165d0e4ce6328546f0919de5c4b4d 162 Gene3D G3DSA:3.40.35.10 4 162 1.6E-50 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DKL56_06460 217165d0e4ce6328546f0919de5c4b4d 162 Pfam PF03830 PTS system sorbose subfamily IIB component 8 153 1.3E-48 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DKL56_05305 9a0a45e5cb6e59590d0e5c5e123e5209 213 SUPERFAMILY SSF141523 82 210 5.1E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DKL56_05305 9a0a45e5cb6e59590d0e5c5e123e5209 213 Pfam PF03734 L,D-transpeptidase catalytic domain 85 210 4.8E-15 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DKL56_05305 9a0a45e5cb6e59590d0e5c5e123e5209 213 Gene3D G3DSA:2.40.440.10 78 210 1.4E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DKL56_06840 b6d167d83d505d1dda1373767ddc68d0 104 SUPERFAMILY SSF159121 30 103 2.62E-7 T 14-10-2018 IPR036166 YxeA-like superfamily DKL56_06840 b6d167d83d505d1dda1373767ddc68d0 104 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 103 6.3E-18 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 DKL56_00845 bc184e89141767c23a1557ebaa57b090 255 Pfam PF03883 Peroxide stress protein YaaA 1 237 3.2E-75 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DKL56_00845 bc184e89141767c23a1557ebaa57b090 255 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 249 27.76 T 14-10-2018 IPR005583 Peroxide stress protein YaaA DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 SUPERFAMILY SSF52540 5 240 3.93E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 SMART SM00382 30 218 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 Gene3D G3DSA:3.40.50.300 1 243 3.1E-76 T 14-10-2018 DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 PIRSF PIRSF039085 2 245 5.6E-96 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DKL56_06315 44cd2df50d805117574d39de81ecaafd 246 Pfam PF00005 ABC transporter 21 169 6.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 188 2.9E-45 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 Gene3D G3DSA:3.40.50.1240 2 199 1.6E-48 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 SUPERFAMILY SSF53254 1 199 7.23E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 PIRSF PIRSF000709 2 175 6.0E-14 T 14-10-2018 DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DKL56_06235 7ebad8d762088d515b1d675d81fecd3c 210 SMART SM00855 3 158 3.7E-15 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DKL56_02940 eb21a365648e951f12e4ce5caa031ea7 334 Gene3D G3DSA:1.20.81.30 188 299 8.4E-8 T 14-10-2018 DKL56_02940 eb21a365648e951f12e4ce5caa031ea7 334 Gene3D G3DSA:1.20.81.30 8 120 2.2E-10 T 14-10-2018 DKL56_02940 eb21a365648e951f12e4ce5caa031ea7 334 Pfam PF00482 Type II secretion system (T2SS), protein F 209 326 2.2E-8 T 14-10-2018 IPR018076 Type II secretion system F domain DKL56_02940 eb21a365648e951f12e4ce5caa031ea7 334 Pfam PF00482 Type II secretion system (T2SS), protein F 21 137 8.8E-13 T 14-10-2018 IPR018076 Type II secretion system F domain DKL56_03640 5e24fdffe96ade8ed0d1391240ce21c3 68 Pfam PF11151 Protein of unknown function (DUF2929) 2 57 2.7E-17 T 14-10-2018 IPR021324 Protein of unknown function DUF2929 DKL56_00670 57123270e3041eda9a330b9942663b3b 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 56 4.4E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DKL56_00670 57123270e3041eda9a330b9942663b3b 227 SUPERFAMILY SSF46689 3 73 1.18E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_00670 57123270e3041eda9a330b9942663b3b 227 Gene3D G3DSA:1.10.357.10 6 183 1.4E-14 T 14-10-2018 DKL56_07720 489f96f0c35927a19ed52217ccc257b8 159 SUPERFAMILY SSF54631 16 139 2.53E-25 T 14-10-2018 DKL56_07720 489f96f0c35927a19ed52217ccc257b8 159 Gene3D G3DSA:3.10.580.10 1 156 7.8E-51 T 14-10-2018 DKL56_07720 489f96f0c35927a19ed52217ccc257b8 159 Pfam PF00571 CBS domain 20 66 0.002 T 14-10-2018 IPR000644 CBS domain DKL56_07720 489f96f0c35927a19ed52217ccc257b8 159 Pfam PF00571 CBS domain 86 138 0.0039 T 14-10-2018 IPR000644 CBS domain DKL56_06760 67fcc1ee1ebda0a7a448922261eaa48b 188 SUPERFAMILY SSF74650 56 121 5.38E-11 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_06760 67fcc1ee1ebda0a7a448922261eaa48b 188 Pfam PF01263 Aldose 1-epimerase 59 120 6.3E-8 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DKL56_06760 67fcc1ee1ebda0a7a448922261eaa48b 188 Gene3D G3DSA:2.70.98.10 53 176 4.0E-17 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DKL56_04690 cb0fe35c4da2a4795f51d66bfa8827c6 319 Gene3D G3DSA:1.10.3720.10 85 313 5.3E-21 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04690 cb0fe35c4da2a4795f51d66bfa8827c6 319 SUPERFAMILY SSF161098 90 305 5.89E-17 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04690 cb0fe35c4da2a4795f51d66bfa8827c6 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 317 6.2E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_00170 6e7f482ed22f7faa3709828f0dc44a5e 323 Pfam PF04909 Amidohydrolase 4 304 1.0E-41 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DKL56_00170 6e7f482ed22f7faa3709828f0dc44a5e 323 Gene3D G3DSA:3.20.20.140 42 313 1.8E-37 T 14-10-2018 DKL56_00170 6e7f482ed22f7faa3709828f0dc44a5e 323 SUPERFAMILY SSF51556 2 303 6.46E-34 T 14-10-2018 IPR032466 Metal-dependent hydrolase DKL56_04335 d8d34948465fa426eda92cb611691c64 237 Pfam PF04973 Nicotinamide mononucleotide transporter 50 229 1.1E-30 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DKL56_04335 d8d34948465fa426eda92cb611691c64 237 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 50 226 2.8E-27 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 DKL56_02990 a5e6382c5b1d7d7cfd16e6cbe5673c70 185 Pfam PF00589 Phage integrase family 13 166 5.2E-27 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DKL56_02990 a5e6382c5b1d7d7cfd16e6cbe5673c70 185 Gene3D G3DSA:1.10.443.10 1 183 6.9E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DKL56_02990 a5e6382c5b1d7d7cfd16e6cbe5673c70 185 SUPERFAMILY SSF56349 14 173 1.29E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DKL56_02930 ad0519510233ab12bad6ef9898aba46f 468 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 71 458 1.6E-68 T 14-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 DKL56_02930 ad0519510233ab12bad6ef9898aba46f 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 8 463 3.9E-59 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DKL56_00125 d42c99e923f1a2cdd72196de6c3642ad 276 Pfam PF03609 PTS system sorbose-specific iic component 6 236 1.0E-70 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_02810 89437d6530b6bc39dc391148e2002a55 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 125 7.7E-36 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DKL56_02810 89437d6530b6bc39dc391148e2002a55 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 129 2.0E-38 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DKL56_02810 89437d6530b6bc39dc391148e2002a55 158 Gene3D G3DSA:3.40.50.300 1 152 7.4E-40 T 14-10-2018 DKL56_02810 89437d6530b6bc39dc391148e2002a55 158 SUPERFAMILY SSF52540 22 123 1.71E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_01835 95fa9d565be9da3116bc6bcc3a6bdcb0 391 Pfam PF13439 Glycosyltransferase Family 4 15 183 1.7E-31 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DKL56_01835 95fa9d565be9da3116bc6bcc3a6bdcb0 391 SUPERFAMILY SSF53756 1 377 1.52E-68 T 14-10-2018 DKL56_01835 95fa9d565be9da3116bc6bcc3a6bdcb0 391 Pfam PF00534 Glycosyl transferases group 1 194 344 1.0E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DKL56_01835 95fa9d565be9da3116bc6bcc3a6bdcb0 391 Gene3D G3DSA:3.40.50.2000 180 342 1.7E-63 T 14-10-2018 DKL56_01835 95fa9d565be9da3116bc6bcc3a6bdcb0 391 Gene3D G3DSA:3.40.50.2000 14 179 1.7E-63 T 14-10-2018 DKL56_03520 d05ed94d547cf0c3c0537848e652f006 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 341 365 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_03520 d05ed94d547cf0c3c0537848e652f006 397 Pfam PF01098 Cell cycle protein 12 384 2.5E-90 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DKL56_01345 e52e5d2427e5bfb4893866d5b8149147 263 Pfam PF03609 PTS system sorbose-specific iic component 3 234 5.7E-66 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_03955 a6ab30176ebf0094b47b5be24094ef88 143 PIRSF PIRSF029938 1 141 3.1E-20 T 14-10-2018 IPR011229 Cell cycle protein GpsB DKL56_03955 a6ab30176ebf0094b47b5be24094ef88 143 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 9 42 3.5E-12 T 14-10-2018 IPR019933 DivIVA domain DKL56_03955 a6ab30176ebf0094b47b5be24094ef88 143 Pfam PF05103 DivIVA protein 9 70 4.6E-14 T 14-10-2018 IPR007793 DivIVA family DKL56_05355 bec2d0e831d0cea2f1c3f80e5f39dc9a 203 Gene3D G3DSA:3.40.50.300 1 195 1.6E-37 T 14-10-2018 DKL56_05355 bec2d0e831d0cea2f1c3f80e5f39dc9a 203 SUPERFAMILY SSF52540 2 201 4.64E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_05355 bec2d0e831d0cea2f1c3f80e5f39dc9a 203 Pfam PF00005 ABC transporter 16 149 2.5E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DKL56_05355 bec2d0e831d0cea2f1c3f80e5f39dc9a 203 SMART SM00382 25 203 1.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DKL56_03045 c3fc46a6541a94d67cd5f92cd218a37c 730 Pfam PF00884 Sulfatase 252 549 1.9E-37 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DKL56_03045 c3fc46a6541a94d67cd5f92cd218a37c 730 PIRSF PIRSF005091 1 643 7.4E-191 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DKL56_03045 c3fc46a6541a94d67cd5f92cd218a37c 730 Gene3D G3DSA:3.40.720.10 244 559 3.0E-72 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DKL56_03045 c3fc46a6541a94d67cd5f92cd218a37c 730 SUPERFAMILY SSF53649 250 655 2.99E-70 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DKL56_00445 9bd6073c19a07f6f3e5eaec870d8f57e 107 SUPERFAMILY SSF46785 2 101 4.32E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_00445 9bd6073c19a07f6f3e5eaec870d8f57e 107 Pfam PF03551 Transcriptional regulator PadR-like family 14 81 1.4E-18 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DKL56_00445 9bd6073c19a07f6f3e5eaec870d8f57e 107 Gene3D G3DSA:1.10.10.10 2 107 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_02240 d2edb67ef47b1c5b45cff45ed9e505f4 95 Pfam PF08349 Protein of unknown function (DUF1722) 8 89 2.0E-17 T 14-10-2018 IPR013560 Domain of unknown function DUF1722 DKL56_07675 066091281b72efbc7f377bc5953887df 363 Gene3D G3DSA:1.10.3290.10 29 297 4.0E-55 T 14-10-2018 IPR036597 Fido-like domain superfamily DKL56_07675 066091281b72efbc7f377bc5953887df 363 Pfam PF02661 Fic/DOC family 116 224 1.1E-19 T 14-10-2018 IPR003812 Fido domain DKL56_07675 066091281b72efbc7f377bc5953887df 363 SUPERFAMILY SSF140931 94 291 4.97E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily DKL56_07445 29bffb75989590aea400fa78ca51db76 493 Pfam PF00890 FAD binding domain 7 469 7.4E-38 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07445 29bffb75989590aea400fa78ca51db76 493 Gene3D G3DSA:3.50.50.60 6 491 1.0E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07445 29bffb75989590aea400fa78ca51db76 493 Gene3D G3DSA:3.90.700.10 247 426 1.0E-92 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_07445 29bffb75989590aea400fa78ca51db76 493 SUPERFAMILY SSF51905 3 492 1.77E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DKL56_07445 29bffb75989590aea400fa78ca51db76 493 SUPERFAMILY SSF56425 287 421 2.43E-21 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 Gene3D G3DSA:2.40.30.40 71 165 6.6E-91 T 14-10-2018 IPR023367 Peptidase M42, domain 2 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 PIRSF PIRSF001123 3 360 5.0E-88 T 14-10-2018 IPR008007 Peptidase M42 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 SUPERFAMILY SSF101821 72 183 1.98E-21 T 14-10-2018 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 Gene3D G3DSA:3.40.630.10 9 341 6.6E-91 T 14-10-2018 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 SUPERFAMILY SSF53187 7 353 8.8E-50 T 14-10-2018 DKL56_01885 cf7df0ce2e662ea7fe753a7556708075 360 Pfam PF05343 M42 glutamyl aminopeptidase 47 341 3.5E-68 T 14-10-2018 IPR008007 Peptidase M42 DKL56_06470 3e9b427d5f277bf0942af929bdcc5695 257 Pfam PF03609 PTS system sorbose-specific iic component 3 233 2.4E-70 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_01470 fb676ba1e84139ed288c51a40ad5f210 140 SUPERFAMILY SSF53062 2 130 4.32E-32 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01470 fb676ba1e84139ed288c51a40ad5f210 140 Gene3D G3DSA:3.40.50.510 1 139 8.0E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DKL56_01470 fb676ba1e84139ed288c51a40ad5f210 140 Pfam PF03610 PTS system fructose IIA component 2 113 5.7E-23 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DKL56_04235 b35f0d60c2ed7c232737a9a72fde61ab 166 PIRSF PIRSF006181 6 166 1.4E-53 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DKL56_04235 b35f0d60c2ed7c232737a9a72fde61ab 166 Pfam PF04073 Aminoacyl-tRNA editing domain 46 155 4.6E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04235 b35f0d60c2ed7c232737a9a72fde61ab 166 Gene3D G3DSA:3.90.960.10 4 166 9.0E-38 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_04235 b35f0d60c2ed7c232737a9a72fde61ab 166 SUPERFAMILY SSF55826 13 164 2.09E-33 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DKL56_05180 6a9db0c002537802de346e4843d447e1 399 PIRSF PIRSF037259 1 398 2.3E-116 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DKL56_05180 6a9db0c002537802de346e4843d447e1 399 Pfam PF05975 Bacterial ABC transporter protein EcsB 3 378 8.7E-101 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DKL56_06000 cb9ec28484d1e22320f1c961af9618f1 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 34.146 T 14-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 DKL56_06000 cb9ec28484d1e22320f1c961af9618f1 265 Pfam PF02361 Cobalt transport protein 14 234 2.6E-43 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DKL56_02665 da094368a1a60d7dbd39f8bade6029e5 180 Pfam PF03729 Short repeat of unknown function (DUF308) 76 148 2.6E-8 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane DKL56_02665 da094368a1a60d7dbd39f8bade6029e5 180 Pfam PF03729 Short repeat of unknown function (DUF308) 19 89 6.3E-12 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane DKL56_02665 da094368a1a60d7dbd39f8bade6029e5 180 Pfam PF03729 Short repeat of unknown function (DUF308) 4 32 0.0057 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane DKL56_02665 da094368a1a60d7dbd39f8bade6029e5 180 Pfam PF03729 Short repeat of unknown function (DUF308) 137 179 1.7E-4 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane DKL56_04165 b3f29e9a9d99c645f7d8eaf222b33eab 275 Pfam PF03618 Kinase/pyrophosphorylase 12 268 9.5E-91 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DKL56_04165 b3f29e9a9d99c645f7d8eaf222b33eab 275 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 10 273 58.146 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DKL56_02605 de2c5cc778fa3b83c93960ab73df826c 229 Gene3D G3DSA:3.40.50.2020 99 229 3.3E-9 T 14-10-2018 DKL56_02605 de2c5cc778fa3b83c93960ab73df826c 229 SUPERFAMILY SSF53271 92 214 1.31E-12 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DKL56_03845 70738b800e866fa2e071d9650c468185 296 Gene3D G3DSA:2.70.98.10 2 292 3.0E-100 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DKL56_03845 70738b800e866fa2e071d9650c468185 296 Pfam PF01263 Aldose 1-epimerase 3 255 3.6E-29 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DKL56_03845 70738b800e866fa2e071d9650c468185 296 SUPERFAMILY SSF74650 3 292 1.13E-55 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DKL56_03290 8b6d100fba1f47f6fe22cba28a3cce99 571 Pfam PF06160 Septation ring formation regulator, EzrA 8 564 5.0E-145 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 DKL56_03290 8b6d100fba1f47f6fe22cba28a3cce99 571 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 7 567 20.593 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 DKL56_01550 70dd763abb3abb5c8cee2274f3e511cd 243 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 2 240 60.266 T 14-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DKL56_01550 70dd763abb3abb5c8cee2274f3e511cd 243 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 59 231 5.6E-56 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DKL56_01550 70dd763abb3abb5c8cee2274f3e511cd 243 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 60 225 6.2E-57 T 14-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 DKL56_01050 d2a402bbfebe3d40560ecfc07a8db133 313 SUPERFAMILY SSF51430 1 305 5.89E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_01050 d2a402bbfebe3d40560ecfc07a8db133 313 PRINTS PR00069 Aldo-keto reductase signature 140 157 3.1E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_01050 d2a402bbfebe3d40560ecfc07a8db133 313 PRINTS PR00069 Aldo-keto reductase signature 109 127 3.1E-6 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DKL56_01050 d2a402bbfebe3d40560ecfc07a8db133 313 Pfam PF00248 Aldo/keto reductase family 16 302 5.0E-52 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DKL56_01050 d2a402bbfebe3d40560ecfc07a8db133 313 Gene3D G3DSA:3.20.20.100 1 313 9.4E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DKL56_00525 d1acb6807701ca319062481617d83864 297 Gene3D G3DSA:3.30.2010.10 69 160 4.4E-31 T 14-10-2018 DKL56_00525 d1acb6807701ca319062481617d83864 297 Pfam PF01435 Peptidase family M48 77 297 8.2E-33 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DKL56_00525 d1acb6807701ca319062481617d83864 297 Hamap MF_00188 Protease HtpX [htpX]. 10 297 25.48 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DKL56_07710 80b77f87055ea3990db549c60eef0dad 50 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 11 50 9.7E-19 T 14-10-2018 IPR021008 Protein of unknown function DUF3687 DKL56_07475 48bfa7d3bd46d222c97fc58a3a369777 262 Gene3D G3DSA:1.10.3720.10 5 261 4.2E-44 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07475 48bfa7d3bd46d222c97fc58a3a369777 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 251 1.9E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_07475 48bfa7d3bd46d222c97fc58a3a369777 262 SUPERFAMILY SSF161098 8 255 1.7E-48 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02250 69ba8be7941e2ee13dc6b5b6e7524303 140 Pfam PF11457 Protein of unknown function (DUF3021) 4 137 1.6E-30 T 14-10-2018 IPR021560 Protein of unknown function DUF3021 DKL56_00190 28f1593300fb69dcc7ec2385ee7285f2 104 Gene3D G3DSA:1.10.287.1080 3 94 1.8E-14 T 14-10-2018 DKL56_00190 28f1593300fb69dcc7ec2385ee7285f2 104 Pfam PF12643 MazG-like family 35 89 1.4E-6 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 DKL56_00190 28f1593300fb69dcc7ec2385ee7285f2 104 SUPERFAMILY SSF101386 3 88 2.49E-16 T 14-10-2018 DKL56_02135 dcbd913c1eb5dbb66b44b8233d15d11b 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 269 2.9E-26 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DKL56_02135 dcbd913c1eb5dbb66b44b8233d15d11b 476 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 322 459 5.5E-15 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DKL56_02550 7e61302079e0287cff7c7a7b0774a0ca 356 SUPERFAMILY SSF47413 2 72 3.64E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DKL56_02550 7e61302079e0287cff7c7a7b0774a0ca 356 Gene3D G3DSA:1.10.260.40 1 108 5.3E-33 T 14-10-2018 DKL56_02550 7e61302079e0287cff7c7a7b0774a0ca 356 Pfam PF13413 Helix-turn-helix domain 8 67 2.7E-24 T 14-10-2018 DKL56_03525 5d3aa6a4217359c01c249b8b1ee0d9d5 114 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 15 81 4.6E-25 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 DKL56_03525 5d3aa6a4217359c01c249b8b1ee0d9d5 114 PIRSF PIRSF031653 9 110 3.1E-28 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 DKL56_03675 471fa1ee28350200f5634f29c4187114 245 Pfam PF02616 Segregation and condensation protein ScpA 22 237 5.1E-36 T 14-10-2018 IPR003768 Segregation and condensation protein A DKL56_03675 471fa1ee28350200f5634f29c4187114 245 Hamap MF_01805 Segregation and condensation protein A [scpA]. 5 241 21.812 T 14-10-2018 IPR003768 Segregation and condensation protein A DKL56_03625 1217a453753ef4152e7d9701d474befc 73 Pfam PF06305 Lipopolysaccharide assembly protein A domain 27 64 1.5E-8 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DKL56_05730 4cea647c73087848ef7316c5a514ae0f 182 SUPERFAMILY SSF51283 3 179 6.8E-33 T 14-10-2018 IPR036157 dUTPase-like superfamily DKL56_05730 4cea647c73087848ef7316c5a514ae0f 182 Pfam PF00692 dUTPase 72 178 1.9E-12 T 14-10-2018 IPR029054 dUTPase-like DKL56_06930 402447fe3ff6010e97c8c9e80ab860f8 265 Pfam PF00950 ABC 3 transport family 4 257 1.7E-44 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DKL56_06930 402447fe3ff6010e97c8c9e80ab860f8 265 SUPERFAMILY SSF81345 2 255 1.27E-31 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DKL56_04480 586c9fb414d6d62aac7494b73dfa6ddd 103 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 92 1.7E-10 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DKL56_04480 586c9fb414d6d62aac7494b73dfa6ddd 103 Gene3D G3DSA:3.30.1330.30 2 101 4.1E-28 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_04480 586c9fb414d6d62aac7494b73dfa6ddd 103 SUPERFAMILY SSF55315 6 99 2.16E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DKL56_03990 acfc025d637664cfacbe73f318e39200 160 SUPERFAMILY SSF54403 102 159 4.17E-14 T 14-10-2018 DKL56_03990 acfc025d637664cfacbe73f318e39200 160 Gene3D G3DSA:3.10.450.40 102 160 1.7E-9 T 14-10-2018 DKL56_02095 078f3db16cdfcfe53409e25f339b14aa 302 SUPERFAMILY SSF161098 100 286 9.94E-25 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_02095 078f3db16cdfcfe53409e25f339b14aa 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 300 2.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_02095 078f3db16cdfcfe53409e25f339b14aa 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 27 79 2.9E-15 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DKL56_02095 078f3db16cdfcfe53409e25f339b14aa 302 Gene3D G3DSA:1.10.3720.10 95 300 4.2E-19 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_00140 340a020dcfe657059bd11c44ed0565e4 475 Pfam PF16116 Domain of unknown function (DUF4832) 206 442 2.6E-25 T 14-10-2018 IPR032267 Domain of unknown function DUF4832 DKL56_00140 340a020dcfe657059bd11c44ed0565e4 475 Pfam PF16173 Domain of unknown function (DUF4874) 20 189 7.8E-36 T 14-10-2018 IPR032379 Domain of unknown function DUF4874 DKL56_04685 47904d12daf9e2b2b0fc510007060734 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 302 6.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DKL56_04685 47904d12daf9e2b2b0fc510007060734 306 SUPERFAMILY SSF161098 96 283 1.83E-18 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_04685 47904d12daf9e2b2b0fc510007060734 306 Gene3D G3DSA:1.10.3720.10 90 299 5.3E-17 T 14-10-2018 IPR035906 MetI-like superfamily DKL56_07350 8c5a36c27be9a9bd15e61d76d599d266 271 SUPERFAMILY SSF53613 8 266 2.34E-69 T 14-10-2018 IPR029056 Ribokinase-like DKL56_07350 8c5a36c27be9a9bd15e61d76d599d266 271 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 264 2.7E-79 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DKL56_07350 8c5a36c27be9a9bd15e61d76d599d266 271 Gene3D G3DSA:3.40.1190.20 2 271 3.0E-83 T 14-10-2018 IPR029056 Ribokinase-like DKL56_07350 8c5a36c27be9a9bd15e61d76d599d266 271 Pfam PF08543 Phosphomethylpyrimidine kinase 15 262 5.3E-82 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 Gene3D G3DSA:3.40.50.300 7 139 4.4E-17 T 14-10-2018 DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 SUPERFAMILY SSF52540 3 205 3.72E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 Pfam PF06144 DNA polymerase III, delta subunit 35 188 4.6E-20 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 32 326 9.4E-36 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 SUPERFAMILY SSF48019 211 326 2.55E-18 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DKL56_03555 e9575785a901721c33e2ae027c3f3360 328 Gene3D G3DSA:1.20.272.10 208 328 7.6E-23 T 14-10-2018 DKL56_02915 d2db4e7cac9a97fbe5a6f23e12fae292 553 Pfam PF13520 Amino acid permease 11 454 7.0E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_02915 d2db4e7cac9a97fbe5a6f23e12fae292 553 Gene3D G3DSA:1.20.1740.10 5 502 7.2E-16 T 14-10-2018 DKL56_02915 d2db4e7cac9a97fbe5a6f23e12fae292 553 PIRSF PIRSF006060 2 484 1.5E-35 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_02915 d2db4e7cac9a97fbe5a6f23e12fae292 553 PIRSF PIRSF006060 508 549 190.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DKL56_04265 ab181b240a6f1687bf14a688cab17aa7 459 Pfam PF05525 Branched-chain amino acid transport protein 16 448 8.9E-129 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DKL56_04265 ab181b240a6f1687bf14a688cab17aa7 459 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 24 437 4.7E-107 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DKL56_01270 b8f573c0c731dfab43fa0880cab0376b 268 Pfam PF03609 PTS system sorbose-specific iic component 4 236 1.0E-68 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_02445 63deec70c068e178a8ed78bb4f3a7116 93 Gene3D G3DSA:3.40.1720.10 1 93 6.6E-29 T 14-10-2018 IPR038226 LMG 18311 protein-like superfamily DKL56_02445 63deec70c068e178a8ed78bb4f3a7116 93 Pfam PF08860 Domain of unknown function (DUF1827) 1 92 3.4E-33 T 14-10-2018 IPR014959 Protein of unknown function DUF1827 DKL56_04515 ad711f5ffba74e468f003f678be1ff73 265 Pfam PF01148 Cytidylyltransferase family 2 262 7.2E-70 T 14-10-2018 DKL56_05205 0b232360506401a77e95749c82a49428 325 Gene3D G3DSA:1.10.3210.10 141 304 2.7E-9 T 14-10-2018 DKL56_05205 0b232360506401a77e95749c82a49428 325 Pfam PF01966 HD domain 161 280 1.3E-10 T 14-10-2018 IPR006674 HD domain DKL56_05205 0b232360506401a77e95749c82a49428 325 SUPERFAMILY SSF109604 146 281 4.0E-13 T 14-10-2018 DKL56_06975 7e6eeb82e9737a38b74f66c46fa4b268 455 Pfam PF06738 Putative threonine/serine exporter 50 296 1.6E-63 T 14-10-2018 IPR010619 Putative threonine/serine exporter DKL56_06975 7e6eeb82e9737a38b74f66c46fa4b268 455 Pfam PF12821 Threonine/Serine exporter, ThrE 318 443 3.2E-18 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE DKL56_07600 60abf1ad2e37fbdd05746c86defd6041 99 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 82 3.0E-5 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DKL56_07600 60abf1ad2e37fbdd05746c86defd6041 99 SUPERFAMILY SSF101386 30 83 5.79E-8 T 14-10-2018 DKL56_07600 60abf1ad2e37fbdd05746c86defd6041 99 Gene3D G3DSA:1.10.287.1080 2 86 1.8E-5 T 14-10-2018 DKL56_00680 b4969238902c60497b2efbfb92e3317a 157 Gene3D G3DSA:3.40.50.450 1 157 3.6E-49 T 14-10-2018 DKL56_00680 b4969238902c60497b2efbfb92e3317a 157 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 3 124 7.0E-24 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 DKL56_00680 b4969238902c60497b2efbfb92e3317a 157 SUPERFAMILY SSF52309 1 141 6.41E-31 T 14-10-2018 DKL56_01485 fdc03430fc29140f7568bbc2c5acbb15 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 14 277 5.5E-91 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_01320 593b3320657aeabf1c30ccaece14bffa 248 SUPERFAMILY SSF48150 75 240 3.22E-5 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DKL56_00440 760da9d00aa9f56ffebf7f3f58e89a0d 207 Pfam PF08006 Protein of unknown function (DUF1700) 6 173 1.5E-12 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 DKL56_00700 9f22670cc111445111cd4382c3c3afd2 259 SUPERFAMILY SSF46955 18 141 4.94E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DKL56_00700 9f22670cc111445111cd4382c3c3afd2 259 Gene3D G3DSA:1.10.1660.10 14 87 5.5E-9 T 14-10-2018 DKL56_05445 d28975104a34ff1e8b510495d937fb3c 177 SUPERFAMILY SSF46689 21 62 7.18E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_05445 d28975104a34ff1e8b510495d937fb3c 177 Gene3D G3DSA:1.10.357.10 6 172 3.1E-13 T 14-10-2018 DKL56_04570 6f7df06f7ac3c1a02f4d86216c621750 392 PIRSF PIRSF003085 5 391 1.5E-126 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 DKL56_04570 6f7df06f7ac3c1a02f4d86216c621750 392 Pfam PF02353 Mycolic acid cyclopropane synthetase 104 370 1.3E-98 T 14-10-2018 DKL56_04570 6f7df06f7ac3c1a02f4d86216c621750 392 Gene3D G3DSA:3.40.50.150 112 379 2.7E-97 T 14-10-2018 DKL56_04570 6f7df06f7ac3c1a02f4d86216c621750 392 SUPERFAMILY SSF53335 113 375 4.38E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DKL56_06735 551458d39099d5d65e253f8a8673d773 129 Gene3D G3DSA:3.90.79.10 1 129 2.5E-18 T 14-10-2018 DKL56_06735 551458d39099d5d65e253f8a8673d773 129 SUPERFAMILY SSF55811 3 117 3.38E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DKL56_06735 551458d39099d5d65e253f8a8673d773 129 Pfam PF00293 NUDIX domain 3 110 4.2E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DKL56_03340 d5ff40b49b47ef4b8d7001044f7b0eeb 43 Pfam PF13253 Protein of unknown function (DUF4044) 6 37 4.6E-14 T 14-10-2018 IPR025270 Protein of unknown function DUF4044 DKL56_04830 d5ee166a94c576596f96981f3a06464c 152 Pfam PF03780 Asp23 family, cell envelope-related function 16 119 3.9E-30 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 DKL56_00290 1a7b3043273995e0a394277f9be145b9 129 Gene3D G3DSA:3.10.20.490 33 127 9.3E-17 T 14-10-2018 DKL56_00290 1a7b3043273995e0a394277f9be145b9 129 Pfam PF14478 Domain of unknown function (DUF4430) 62 126 1.1E-17 T 14-10-2018 IPR027954 Domain of unknown function DUF4430 Reactome: R-HSA-196741 DKL56_06180 8868bdc3f96a51e1c649327838a8fcae 122 Pfam PF11457 Protein of unknown function (DUF3021) 4 117 5.2E-13 T 14-10-2018 IPR021560 Protein of unknown function DUF3021 DKL56_05250 2ab27f728c3ac20dfc632875753d4e68 264 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.3E-75 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_06695 d2dbb7219699bd411b38cc53ff63629c 377 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 337 2.2E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DKL56_00185 3670f52243800b0013b0e095b72dae40 98 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 22 88 4.8E-26 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 DKL56_00585 f2b9f0ea6b4acbf0d6c50422b3f474c7 31 Pfam PF13333 Integrase core domain 1 29 8.0E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DKL56_01350 7b3222e9e33a676ad1d5e4d7ec394cba 277 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 275 1.6E-97 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_02995 bf981568abe8e072649f5563245bbeec 339 Pfam PF03217 SLAP domain 40 89 2.3E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_04345 c383aaa2a935370197a3c11c37391b33 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 105 4.2E-22 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DKL56_04110 3ee99153994bb41131751d27eb73a512 401 Pfam PF02517 CAAX protease self-immunity 247 344 2.4E-8 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DKL56_03335 3b3ab52739164539a30344e04a9782b6 177 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 13 158 1.4E-13 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DKL56_00130 2f969f4da082b9045d9c29b8ba973971 277 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 16 275 1.8E-77 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_01670 e8886beeaf0596abde9bb65c8cf68c33 202 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 7 191 5.6E-32 T 14-10-2018 IPR010178 Integral membrane protein 1906 DKL56_01670 e8886beeaf0596abde9bb65c8cf68c33 202 Pfam PF07314 Protein of unknown function (DUF1461) 8 180 6.6E-39 T 14-10-2018 IPR010178 Integral membrane protein 1906 DKL56_02590 fddab6f4c0e3908cd3580bae6c50f60d 385 Pfam PF00953 Glycosyl transferase family 4 75 233 4.6E-39 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DKL56_07765 8dd7549133eea09d1d9f93ad592c81d9 166 Pfam PF03780 Asp23 family, cell envelope-related function 13 119 1.4E-31 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 DKL56_00260 d5ccad92eb686ed938df7f0ff88b136c 287 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 31 287 5.9E-70 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like DKL56_00260 d5ccad92eb686ed938df7f0ff88b136c 287 Gene3D G3DSA:3.40.50.1820 36 287 4.1E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_00260 d5ccad92eb686ed938df7f0ff88b136c 287 SUPERFAMILY SSF53474 40 273 1.18E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DKL56_07105 8816d548895301e6308238203f246da1 91 Pfam PF11148 Protein of unknown function (DUF2922) 6 73 1.0E-17 T 14-10-2018 IPR021321 Protein of unknown function DUF2922 DKL56_03700 404daa5a3b835121e0970a7d250e3b3c 142 SUPERFAMILY SSF46785 7 132 1.9E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DKL56_03700 404daa5a3b835121e0970a7d250e3b3c 142 Pfam PF02082 Transcriptional regulator 2 81 3.2E-13 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DKL56_03700 404daa5a3b835121e0970a7d250e3b3c 142 Gene3D G3DSA:1.10.10.10 2 142 4.1E-41 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DKL56_06405 7b35aff1e1b7261c2603e0fe394b0cc0 641 SUPERFAMILY SSF56672 126 305 2.15E-5 T 14-10-2018 DKL56_06405 7b35aff1e1b7261c2603e0fe394b0cc0 641 TIGRFAM TIGR04499 abortive_AbiA: abortive infection protein, AbiA family 8 630 2.2E-169 T 14-10-2018 IPR030986 Abortive infection protein, AbiA family DKL56_00750 402709059016b266740e019fac26ef4d 204 Pfam PF12822 ECF transporter, substrate-specific component 7 193 2.0E-19 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 DKL56_00750 402709059016b266740e019fac26ef4d 204 Gene3D G3DSA:1.10.1760.20 1 203 2.1E-47 T 14-10-2018 DKL56_01405 c62b20a445dcb277e64d6a5f815599fa 272 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 9 268 5.7E-84 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_00605 0fb574c3b0dbb47854b423ef4a1f1e01 119 Pfam PF04343 Protein of unknown function, DUF488 6 113 6.3E-31 T 14-10-2018 IPR007438 Protein of unknown function DUF488 DKL56_01430 7f89f7de6b959280ab3d82bd11bca270 386 Pfam PF03217 SLAP domain 112 161 6.3E-7 T 14-10-2018 IPR024968 SLAP domain DKL56_01430 7f89f7de6b959280ab3d82bd11bca270 386 Pfam PF03217 SLAP domain 44 94 1.2E-12 T 14-10-2018 IPR024968 SLAP domain DKL56_03250 b1cb32586a4147d40d0ce65065f116b8 76 Pfam PF11184 Protein of unknown function (DUF2969) 1 74 2.7E-19 T 14-10-2018 IPR021351 Protein of unknown function DUF2969 DKL56_07835 96a7b79baee006a5f96b2c2ae149f791 288 Pfam PF02096 60Kd inner membrane protein 69 253 2.6E-54 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DKL56_07835 96a7b79baee006a5f96b2c2ae149f791 288 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 68 253 3.3E-60 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DKL56_07835 96a7b79baee006a5f96b2c2ae149f791 288 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 10 257 28.709 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 DKL56_00145 4460545515f597356ec3e1fad48ac4e2 494 Pfam PF16173 Domain of unknown function (DUF4874) 59 229 2.3E-42 T 14-10-2018 IPR032379 Domain of unknown function DUF4874 DKL56_00145 4460545515f597356ec3e1fad48ac4e2 494 Pfam PF16116 Domain of unknown function (DUF4832) 244 484 1.5E-32 T 14-10-2018 IPR032267 Domain of unknown function DUF4832 DKL56_02350 f4fc795fc954681867eb445c58a5174b 78 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 11 69 3.1E-15 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 DKL56_00285 d1e7ddbbed51ed91b6ed20d89ab1dd9b 171 Gene3D G3DSA:1.10.1760.20 2 164 9.3E-15 T 14-10-2018 DKL56_03485 c0177415e20c2030abc03073b550397a 263 Pfam PF01061 ABC-2 type transporter 25 219 4.3E-12 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DKL56_01535 eee1ba1a663a5452ff1ead8eececcfb1 371 SUPERFAMILY SSF51126 18 274 4.71E-9 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DKL56_02010 7fa30556c700bdc68245e28c1d469e92 125 SUPERFAMILY SSF109797 21 120 1.23E-24 T 14-10-2018 DKL56_02010 7fa30556c700bdc68245e28c1d469e92 125 Pfam PF08951 Enterocin A Immunity 27 96 6.8E-6 T 14-10-2018 IPR015046 Enterocin A Immunity DKL56_04290 dbedb22716f5b6204a411a9f6c5dc886 253 Pfam PF03217 SLAP domain 127 178 3.4E-7 T 14-10-2018 IPR024968 SLAP domain DKL56_04290 dbedb22716f5b6204a411a9f6c5dc886 253 Pfam PF03217 SLAP domain 190 239 6.2E-11 T 14-10-2018 IPR024968 SLAP domain DKL56_06390 4f0427e5946c873575e5a06ec2df99e1 195 SUPERFAMILY SSF46689 7 74 2.57E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DKL56_06390 4f0427e5946c873575e5a06ec2df99e1 195 Gene3D G3DSA:1.10.357.10 5 182 4.1E-29 T 14-10-2018 DKL56_04860 9957382f02b3b42f02e05a269a784ac0 444 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 333 422 1.1E-13 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 DKL56_00780 b86eb0d7a8913f7a63486f28624e8864 318 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 290 8.2E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DKL56_01095 aa4aaaec7c3c6bc7fb8941e49d86c68e 149 Pfam PF11694 Protein of unknown function (DUF3290) 2 146 9.9E-50 T 14-10-2018 IPR021707 Protein of unknown function DUF3290 DKL56_06355 1dbb9628188dc8f82a37a4b2a524857f 130 Pfam PF11457 Protein of unknown function (DUF3021) 6 123 1.7E-18 T 14-10-2018 IPR021560 Protein of unknown function DUF3021 DKL56_00565 face1fa93576968cb27e67d178c34e65 508 Pfam PF03217 SLAP domain 42 118 0.011 T 14-10-2018 IPR024968 SLAP domain DKL56_00565 face1fa93576968cb27e67d178c34e65 508 Pfam PF03217 SLAP domain 136 214 0.0034 T 14-10-2018 IPR024968 SLAP domain DKL56_01935 c1603cd42e1acfa8ceb89dd6de84e6c2 278 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 13 276 4.8E-103 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DKL56_06785 62b5ab357b9d75d0d057816e9796770c 466 PIRSF PIRSF006304 4 465 3.9E-150 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DKL56_06785 62b5ab357b9d75d0d057816e9796770c 466 Pfam PF03611 PTS system sugar-specific permease component 10 402 3.9E-71 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DKL56_06220 632b26d2d9247df87c7fe51c36187342 273 Pfam PF10978 Protein of unknown function (DUF2785) 73 246 2.4E-42 T 14-10-2018 IPR021247 Protein of unknown function DUF2785 DKL56_03415 cafa7fc27c78b63dba74298c1b52f46c 259 Pfam PF05103 DivIVA protein 11 142 1.7E-18 T 14-10-2018 IPR007793 DivIVA family DKL56_03415 cafa7fc27c78b63dba74298c1b52f46c 259 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 11 45 9.1E-15 T 14-10-2018 IPR019933 DivIVA domain DKL56_04350 e4954e431be9f839846a3d27f20a8929 228 Pfam PF03591 AzlC protein 18 150 8.3E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DKL56_04725 76fb454b1769f14d666d216939e923f4 120 Pfam PF03780 Asp23 family, cell envelope-related function 10 116 3.6E-29 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 DKL56_00385 3b5ee4747da13be45022e039d7d88e99 448 Pfam PF00860 Permease family 23 400 2.3E-65 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DKL56_01020 a8f00cc34102b33e592327986dbcda9f 274 Pfam PF03609 PTS system sorbose-specific iic component 4 234 1.5E-57 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DKL56_02480 7bb02ea4740ae268842f2758707f7561 286 Pfam PF06054 Competence protein CoiA-like family 14 227 4.0E-15 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like DKL56_05955 e0f36c5eab3faba0c99bffa333002414 215 Pfam PF08006 Protein of unknown function (DUF1700) 6 185 2.0E-16 T 14-10-2018 IPR012963 Protein of unknown function DUF1700 DKL56_01675 fbb669dc72ea832d4f4d0387bb01eabe 216 Pfam PF09335 SNARE associated Golgi protein 45 173 1.4E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein DKL56_03405 e4457a1e06b04d946cead77f259dc97e 100 Pfam PF02325 YGGT family 13 85 4.0E-15 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DKL56_03135 3cffe34c251a1ec42589d96ef60577a4 78 Pfam PF03217 SLAP domain 26 76 1.0E-13 T 14-10-2018 IPR024968 SLAP domain DKL56_00905 641967b53fce72763e4276f0262189dd 178 Pfam PF02674 Colicin V production protein 4 159 7.4E-22 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DKL56_03025 cb3fca0b75764b07454c7286f6f3c835 131 Pfam PF13630 SdpI/YhfL protein family 24 93 9.8E-7 T 14-10-2018 IPR025962 SdpI/YhfL protein family DKL56_07400 c25a5fad404d28fa963b2340da627787 374 Pfam PF11175 Protein of unknown function (DUF2961) 84 355 3.4E-87 T 14-10-2018 IPR021345 Protein of unknown function DUF2961 DKL56_07400 c25a5fad404d28fa963b2340da627787 374 Gene3D G3DSA:2.60.120.1390 156 374 1.6E-50 T 14-10-2018