A3P31_00010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00020	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00045	SSF56349	DNA breaking-rejoining enzymes
A3P31_00050	SSF50249	Nucleic acid-binding proteins
A3P31_00060	SSF54106	LysM domain
A3P31_00070	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_00080	SSF53098	Ribonuclease H-like
A3P31_00085	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00120	SSF56349	DNA breaking-rejoining enzymes
A3P31_00125	SSF50249	Nucleic acid-binding proteins
A3P31_00175	SSF54106	LysM domain
A3P31_00185	SSF50249	Nucleic acid-binding proteins
A3P31_00190	SSF56349	DNA breaking-rejoining enzymes
A3P31_00235	SSF54106	LysM domain
A3P31_00460	SSF46955	Putative DNA-binding domain
A3P31_00460	SSF53041	Resolvase-like
A3P31_00480	SSF56349	DNA breaking-rejoining enzymes
A3P31_00485	SSF46955	Putative DNA-binding domain
A3P31_00490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00535	SSF103473	MFS general substrate transporter
A3P31_00540	SSF69572	Activating enzymes of the ubiquitin-like proteins
A3P31_00545	SSF54285	MoaD/ThiS
A3P31_00555	SSF47413	lambda repressor-like DNA-binding domains
A3P31_00570	SSF53474	alpha/beta-Hydrolases
A3P31_00575	SSF53067	Actin-like ATPase domain
A3P31_00580	SSF48024	N-terminal domain of DnaB helicase
A3P31_00580	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00585	SSF55653	Ribosomal protein L9 C-domain
A3P31_00585	SSF55658	L9 N-domain-like
A3P31_00590	SSF64182	DHH phosphoesterases
A3P31_00595	SSF143865	CorA soluble domain-like
A3P31_00595	SSF144083	Magnesium transport protein CorA, transmembrane region
A3P31_00600	SSF46911	Ribosomal protein S18
A3P31_00605	SSF50249	Nucleic acid-binding proteins
A3P31_00610	SSF54995	Ribosomal protein S6
A3P31_00615	SSF101904	GyrA/ParC C-terminal domain-like
A3P31_00615	SSF56719	Type II DNA topoisomerase
A3P31_00620	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_00620	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_00620	SSF56719	Type II DNA topoisomerase
A3P31_00625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00630	SSF55174	Alpha-L RNA-binding motif
A3P31_00635	SSF55979	DNA clamp
A3P31_00640	SSF48295	TrpR-like
A3P31_00640	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00650	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_00660	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00665	SSF51905	FAD/NAD(P)-binding domain
A3P31_00670	SSF52467	DHS-like NAD/FAD-binding domain
A3P31_00670	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
A3P31_00675	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
A3P31_00675	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_00680	SSF116726	TrkA C-terminal domain-like
A3P31_00680	SSF81340	Clc chloride channel
A3P31_00685	SSF48334	DNA repair protein MutS, domain III
A3P31_00685	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00695	SSF89360	HesB-like domain
A3P31_00700	SSF103473	MFS general substrate transporter
A3P31_00705	SSF46689	Homeodomain-like
A3P31_00705	SSF53098	Ribonuclease H-like
A3P31_00710	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_00715	SSF53383	PLP-dependent transferases
A3P31_00720	SSF53383	PLP-dependent transferases
A3P31_00720	SSF55904	Ornithine decarboxylase C-terminal domain
A3P31_00730	SSF109998	Triger factor/SurA peptide-binding domain-like
A3P31_00730	SSF54534	FKBP-like
A3P31_00735	SSF52025	PA domain
A3P31_00735	SSF52743	Subtilisin-like
A3P31_00745	SSF56784	HAD-like
A3P31_00745	SSF81653	Calcium ATPase, transduction domain A
A3P31_00745	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_00750	SSF49503	Cupredoxins
A3P31_00755	SSF49503	Cupredoxins
A3P31_00760	SSF46785	"Winged helix" DNA-binding domain
A3P31_00775	SSF56420	Peptide deformylase
A3P31_00780	SSF46689	Homeodomain-like
A3P31_00780	SSF53098	Ribonuclease H-like
A3P31_00795	SSF101386	all-alpha NTP pyrophosphatases
A3P31_00815	SSF51395	FMN-linked oxidoreductases
A3P31_00820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00825	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00830	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_00835	SSF51430	NAD(P)-linked oxidoreductase
A3P31_00845	SSF53697	SIS domain
A3P31_00850	SSF56601	beta-lactamase/transpeptidase-like
A3P31_00855	SSF51604	Enolase C-terminal domain-like
A3P31_00855	SSF54826	Enolase N-terminal domain-like
A3P31_00860	SSF53474	alpha/beta-Hydrolases
A3P31_00870	SSF53067	Actin-like ATPase domain
A3P31_00880	SSF56601	beta-lactamase/transpeptidase-like
A3P31_00885	SSF53822	Periplasmic binding protein-like I
A3P31_00890	SSF53850	Periplasmic binding protein-like II
A3P31_00895	SSF53850	Periplasmic binding protein-like II
A3P31_00905	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00905	SSF90123	ABC transporter transmembrane region
A3P31_00910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00910	SSF90123	ABC transporter transmembrane region
A3P31_00925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_00975	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
A3P31_01005	SSF47413	lambda repressor-like DNA-binding domains
A3P31_01010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01010	SSF90123	ABC transporter transmembrane region
A3P31_01020	SSF56784	HAD-like
A3P31_01020	SSF81653	Calcium ATPase, transduction domain A
A3P31_01020	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_01025	SSF54631	CBS-domain pair
A3P31_01030	SSF53098	Ribonuclease H-like
A3P31_01045	SSF50998	Quinoprotein alcohol dehydrogenase-like
A3P31_01060	SSF56801	Acetyl-CoA synthetase-like
A3P31_01070	SSF47336	ACP-like
A3P31_01080	SSF56601	beta-lactamase/transpeptidase-like
A3P31_01085	SSF103473	MFS general substrate transporter
A3P31_01105	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01205	SSF52728	PTS IIb component
A3P31_01205	SSF53062	PTS system fructose IIA component-like
A3P31_01235	SSF52317	Class I glutamine amidotransferase-like
A3P31_01245	SSF55681	Class II aaRS and biotin synthetases
A3P31_01250	SSF103481	Multidrug resistance efflux transporter EmrE
A3P31_01260	SSF52317	Class I glutamine amidotransferase-like
A3P31_01265	SSF53613	Ribokinase-like
A3P31_01270	SSF52799	(Phosphotyrosine protein) phosphatases II
A3P31_01275	SSF47413	lambda repressor-like DNA-binding domains
A3P31_01275	SSF53822	Periplasmic binding protein-like I
A3P31_01280	SSF49899	Concanavalin A-like lectins/glucanases
A3P31_01280	SSF75005	Arabinanase/levansucrase/invertase
A3P31_01285	SSF51261	Duplicated hybrid motif
A3P31_01285	SSF55604	Glucose permease domain IIB
A3P31_01295	SSF52949	Macro domain-like
A3P31_01300	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01300	SSF90123	ABC transporter transmembrane region
A3P31_01305	SSF52317	Class I glutamine amidotransferase-like
A3P31_01310	SSF103473	MFS general substrate transporter
A3P31_01320	SSF51569	Aldolase
A3P31_01325	SSF54197	HIT-like
A3P31_01330	SSF46689	Homeodomain-like
A3P31_01330	SSF53697	SIS domain
A3P31_01335	SSF56601	beta-lactamase/transpeptidase-like
A3P31_01340	SSF51695	PLC-like phosphodiesterases
A3P31_01345	SSF51366	Ribulose-phoshate binding barrel
A3P31_01370	SSF53254	Phosphoglycerate mutase-like
A3P31_01375	SSF53254	Phosphoglycerate mutase-like
A3P31_01380	SSF46689	Homeodomain-like
A3P31_01390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01415	SSF46689	Homeodomain-like
A3P31_01415	SSF48498	Tetracyclin repressor-like, C-terminal domain
A3P31_01420	SSF52218	Flavoproteins
A3P31_01425	SSF52218	Flavoproteins
A3P31_01430	SSF50891	Cyclophilin-like
A3P31_01430	SSF51445	(Trans)glycosidases
A3P31_01435	SSF52799	(Phosphotyrosine protein) phosphatases II
A3P31_01440	SSF143631	ApbE-like
A3P31_01450	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_01455	SSF109709	KorB DNA-binding domain-like
A3P31_01455	SSF110849	ParB/Sulfiredoxin
A3P31_01460	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01465	SSF109709	KorB DNA-binding domain-like
A3P31_01465	SSF110849	ParB/Sulfiredoxin
A3P31_01475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01475	SSF81271	TGS-like
A3P31_01480	SSF103473	MFS general substrate transporter
A3P31_01485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01485	SSF90123	ABC transporter transmembrane region
A3P31_01490	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01490	SSF90123	ABC transporter transmembrane region
A3P31_01495	SSF46894	C-terminal effector domain of the bipartite response regulators
A3P31_01495	SSF52172	CheY-like
A3P31_01500	SSF47384	Homodimeric domain of signal transducing histidine kinase
A3P31_01500	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_01505	SSF53244	MurD-like peptide ligases, peptide-binding domain
A3P31_01505	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_01505	SSF63418	MurE/MurF N-terminal domain
A3P31_01510	SSF53681	Aspartate/glutamate racemase
A3P31_01515	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01525	SSF51011	Glycosyl hydrolase domain
A3P31_01525	SSF51445	(Trans)glycosidases
A3P31_01525	SSF74650	Galactose mutarotase-like
A3P31_01530	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_01530	SSF46785	"Winged helix" DNA-binding domain
A3P31_01535	SSF53613	Ribokinase-like
A3P31_01540	SSF52794	PTS system IIB component-like
A3P31_01540	SSF55804	Phoshotransferase/anion transport protein
A3P31_01550	SSF56784	HAD-like
A3P31_01555	SSF46785	"Winged helix" DNA-binding domain
A3P31_01560	SSF53807	"Helical backbone" metal receptor
A3P31_01565	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01570	SSF81345	ABC transporter involved in vitamin B12 uptake, BtuC
A3P31_01580	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_01600	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01620	SSF50118	Cell growth inhibitor/plasmid maintenance toxic component
A3P31_01630	SSF47240	Ferritin-like
A3P31_01635	SSF52218	Flavoproteins
A3P31_01655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01660	SSF54001	Cysteine proteinases
A3P31_01665	SSF141523	L,D-transpeptidase catalytic domain-like
A3P31_01665	SSF143985	L,D-transpeptidase pre-catalytic domain-like
A3P31_01680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01700	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01710	SSF53254	Phosphoglycerate mutase-like
A3P31_01730	SSF51366	Ribulose-phoshate binding barrel
A3P31_01735	SSF46689	Homeodomain-like
A3P31_01735	SSF53697	SIS domain
A3P31_01740	SSF56784	HAD-like
A3P31_01740	SSF81653	Calcium ATPase, transduction domain A
A3P31_01740	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
A3P31_01740	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_01755	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_01760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01770	SSF46689	Homeodomain-like
A3P31_01770	SSF53697	SIS domain
A3P31_01825	SSF46689	Homeodomain-like
A3P31_01825	SSF53098	Ribonuclease H-like
A3P31_01830	SSF52266	SGNH hydrolase
A3P31_01835	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01840	SSF50104	Translation proteins SH3-like domain
A3P31_01840	SSF50249	Nucleic acid-binding proteins
A3P31_01845	SSF50151	SacY-like RNA-binding domain
A3P31_01845	SSF63520	PTS-regulatory domain, PRD
A3P31_01850	SSF51261	Duplicated hybrid motif
A3P31_01855	SSF51445	(Trans)glycosidases
A3P31_01860	SSF103481	Multidrug resistance efflux transporter EmrE
A3P31_01865	SSF53850	Periplasmic binding protein-like II
A3P31_01870	SSF52728	PTS IIb component
A3P31_01870	SSF53062	PTS system fructose IIA component-like
A3P31_01895	SSF51726	UROD/MetE-like
A3P31_01900	SSF118215	Proton glutamate symport protein
A3P31_01910	SSF81330	Gated mechanosensitive channel
A3P31_01930	SSF53187	Zn-dependent exopeptidases
A3P31_01930	SSF55031	Bacterial exopeptidase dimerisation domain
A3P31_01945	SSF52467	DHS-like NAD/FAD-binding domain
A3P31_01950	SSF52113	BRCT domain
A3P31_01950	SSF53098	Ribonuclease H-like
A3P31_01960	SSF51430	NAD(P)-linked oxidoreductase
A3P31_01975	SSF50331	MOP-like
A3P31_01975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_01980	SSF161098	MetI-like
A3P31_01985	SSF161098	MetI-like
A3P31_01990	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_01995	SSF53850	Periplasmic binding protein-like II
A3P31_02005	SSF46785	"Winged helix" DNA-binding domain
A3P31_02010	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_02015	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_02020	SSF53067	Actin-like ATPase domain
A3P31_02025	SSF56601	beta-lactamase/transpeptidase-like
A3P31_02030	SSF46689	Homeodomain-like
A3P31_02035	SSF58104	Methyl-accepting chemotaxis protein (MCP) signaling domain
A3P31_02035	SSF82866	Multidrug efflux transporter AcrB transmembrane domain
A3P31_02040	SSF56784	HAD-like
A3P31_02055	SSF53720	ALDH-like
A3P31_02060	SSF47413	lambda repressor-like DNA-binding domains
A3P31_02060	SSF48452	TPR-like
A3P31_02065	SSF53474	alpha/beta-Hydrolases
A3P31_02075	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_02080	SSF46589	tRNA-binding arm
A3P31_02080	SSF55681	Class II aaRS and biotin synthetases
A3P31_02245	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_02250	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_02260	SSF53649	Alkaline phosphatase-like
A3P31_02385	SSF53720	ALDH-like
A3P31_02385	SSF56796	Dehydroquinate synthase-like
A3P31_02395	SSF69118	AhpD-like
A3P31_02405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02410	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02415	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_02420	SSF52949	Macro domain-like
A3P31_02430	SSF51430	NAD(P)-linked oxidoreductase
A3P31_02440	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_02475	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_02475	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
A3P31_02480	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_02480	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
A3P31_02485	SSF46689	Homeodomain-like
A3P31_02485	SSF53697	SIS domain
A3P31_02490	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_02490	SSF56327	LDH C-terminal domain-like
A3P31_02505	SSF52821	Rhodanese/Cell cycle control phosphatase
A3P31_02510	SSF51126	Pectin lyase-like
A3P31_02515	SSF46785	"Winged helix" DNA-binding domain
A3P31_02515	SSF64288	Chorismate lyase-like
A3P31_02520	SSF52374	Nucleotidylyl transferase
A3P31_02530	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_02535	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_02540	SSF51690	Nicotinate/Quinolinate PRTase C-terminal domain-like
A3P31_02540	SSF54675	Nicotinate/Quinolinate PRTase N-terminal domain-like
A3P31_02545	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_02550	SSF51126	Pectin lyase-like
A3P31_02550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02555	SSF56784	HAD-like
A3P31_02555	SSF81653	Calcium ATPase, transduction domain A
A3P31_02555	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
A3P31_02555	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_02560	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_02570	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_02595	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02600	SSF47781	RuvA domain 2-like
A3P31_02600	SSF50249	Nucleic acid-binding proteins
A3P31_02600	SSF52113	BRCT domain
A3P31_02600	SSF56091	DNA ligase/mRNA capping enzyme, catalytic domain
A3P31_02610	SSF141000	Glu-tRNAGln amidotransferase C subunit
A3P31_02615	SSF75304	Amidase signature (AS) enzymes
A3P31_02620	SSF55931	Glutamine synthetase/guanido kinase
A3P31_02620	SSF89095	GatB/YqeY motif
A3P31_02625	SSF111331	NAD kinase/diacylglycerol kinase-like
A3P31_02635	SSF56784	HAD-like
A3P31_02655	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02665	SSF101852	Bacterial fluorinating enzyme, C-terminal domain
A3P31_02665	SSF102522	Bacterial fluorinating enzyme, N-terminal domain
A3P31_02675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02685	SSF50249	Nucleic acid-binding proteins
A3P31_02685	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_02690	SSF52980	Restriction endonuclease-like
A3P31_02710	SSF47413	lambda repressor-like DNA-binding domains
A3P31_02715	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_02725	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02725	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_02750	SSF51161	Trimeric LpxA-like enzymes
A3P31_02800	SSF56784	HAD-like
A3P31_02800	SSF81653	Calcium ATPase, transduction domain A
A3P31_02800	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_02805	SSF55008	HMA, heavy metal-associated domain
A3P31_02810	SSF47240	Ferritin-like
A3P31_02815	SSF46785	"Winged helix" DNA-binding domain
A3P31_02815	SSF51206	cAMP-binding domain-like
A3P31_02820	SSF52141	Uracil-DNA glycosylase-like
A3P31_02825	SSF56601	beta-lactamase/transpeptidase-like
A3P31_02850	SSF55120	Pseudouridine synthase
A3P31_02855	SSF53955	Lysozyme-like
A3P31_02855	SSF56601	beta-lactamase/transpeptidase-like
A3P31_02860	SSF158622	YheA/YmcA-like
A3P31_02865	SSF56300	Metallo-dependent phosphatases
A3P31_02870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02875	SSF109604	HD-domain/PDEase-like
A3P31_02880	SSF109998	Triger factor/SurA peptide-binding domain-like
A3P31_02880	SSF54534	FKBP-like
A3P31_02895	SSF54197	HIT-like
A3P31_02900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02910	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_02920	SSF52833	Thioredoxin-like
A3P31_02925	SSF50249	Nucleic acid-binding proteins
A3P31_02930	SSF110395	CutC-like
A3P31_02935	SSF51984	MurCD N-terminal domain
A3P31_02935	SSF53244	MurD-like peptide ligases, peptide-binding domain
A3P31_02935	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_02940	SSF46785	"Winged helix" DNA-binding domain
A3P31_02940	SSF64288	Chorismate lyase-like
A3P31_02955	SSF47807	5' to 3' exonuclease, C-terminal subdomain
A3P31_02955	SSF53098	Ribonuclease H-like
A3P31_02955	SSF56672	DNA/RNA polymerases
A3P31_02955	SSF88723	PIN domain-like
A3P31_02960	SSF46946	S13-like H2TH domain
A3P31_02960	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
A3P31_02960	SSF81624	N-terminal domain of MutM-like DNA repair proteins
A3P31_02965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_02985	SSF52954	Class II aaRS ABD-related
A3P31_02985	SSF55186	ThrRS/AlaRS common domain
A3P31_02985	SSF55681	Class II aaRS and biotin synthetases
A3P31_02985	SSF81271	TGS-like
A3P31_02990	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_03000	SSF54364	Translation initiation factor IF3, N-terminal domain
A3P31_03000	SSF55200	Translation initiation factor IF3, C-terminal domain
A3P31_03005	SSF143034	L35p-like
A3P31_03010	SSF74731	Ribosomal protein L20
A3P31_03020	SSF56784	HAD-like
A3P31_03025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03030	SSF52374	Nucleotidylyl transferase
A3P31_03035	SSF109604	HD-domain/PDEase-like
A3P31_03040	SSF81301	Nucleotidyltransferase
A3P31_03045	SSF52374	Nucleotidylyl transferase
A3P31_03055	SSF46894	C-terminal effector domain of the bipartite response regulators
A3P31_03055	SSF52172	CheY-like
A3P31_03060	SSF158472	HAMP domain-like
A3P31_03060	SSF47384	Homodimeric domain of signal transducing histidine kinase
A3P31_03060	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_03070	SSF54975	Acylphosphatase/BLUF domain-like
A3P31_03075	SSF55315	L30e-like
A3P31_03075	SSF75217	alpha/beta knot
A3P31_03080	SSF46785	"Winged helix" DNA-binding domain
A3P31_03085	SSF46589	tRNA-binding arm
A3P31_03085	SSF55681	Class II aaRS and biotin synthetases
A3P31_03090	SSF46955	Putative DNA-binding domain
A3P31_03090	SSF50249	Nucleic acid-binding proteins
A3P31_03090	SSF54991	Anticodon-binding domain of PheRS
A3P31_03090	SSF55681	Class II aaRS and biotin synthetases
A3P31_03090	SSF56037	PheT/TilS domain
A3P31_03100	SSF46557	GreA transcript cleavage protein, N-terminal domain
A3P31_03100	SSF54534	FKBP-like
A3P31_03110	SSF56519	Penicillin binding protein dimerisation domain
A3P31_03110	SSF56601	beta-lactamase/transpeptidase-like
A3P31_03115	SSF57829	Zn-binding ribosomal proteins
A3P31_03120	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_03125	SSF144091	Rhomboid-like
A3P31_03130	SSF158379	YqgQ-like
A3P31_03135	SSF52821	Rhodanese/Cell cycle control phosphatase
A3P31_03145	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03150	SSF54368	Glutamine synthetase, N-terminal domain
A3P31_03150	SSF55931	Glutamine synthetase/guanido kinase
A3P31_03155	SSF103473	MFS general substrate transporter
A3P31_03160	SSF56784	HAD-like
A3P31_03170	SSF53474	alpha/beta-Hydrolases
A3P31_03175	SSF53901	Thiolase-like
A3P31_03180	SSF55035	NAD-binding domain of HMG-CoA reductase
A3P31_03180	SSF56542	Substrate-binding domain of HMG-CoA reductase
A3P31_03185	SSF53901	Thiolase-like
A3P31_03190	SSF50249	Nucleic acid-binding proteins
A3P31_03190	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_03200	SSF159234	FomD-like
A3P31_03215	SSF54631	CBS-domain pair
A3P31_03215	SSF56176	FAD-binding/transporter-associated domain-like
A3P31_03220	SSF50447	Translation proteins
A3P31_03220	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03220	SSF54980	EF-G C-terminal domain-like
A3P31_03230	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03240	SSF55594	HPr-like
A3P31_03245	SSF47831	Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
A3P31_03245	SSF51621	Phosphoenolpyruvate/pyruvate domain
A3P31_03245	SSF52009	Phosphohistidine domain
A3P31_03250	SSF52833	Thioredoxin-like
A3P31_03265	SSF52833	Thioredoxin-like
A3P31_03270	SSF55154	CYTH-like phosphatases
A3P31_03275	SSF81301	Nucleotidyltransferase
A3P31_03280	SSF111331	NAD kinase/diacylglycerol kinase-like
A3P31_03285	SSF55120	Pseudouridine synthase
A3P31_03290	SSF51905	FAD/NAD(P)-binding domain
A3P31_03295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03300	SSF51004	C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
A3P31_03305	SSF141530	PTSIIA/GutA-like
A3P31_03315	SSF75217	alpha/beta knot
A3P31_03320	SSF54611	SecB-like
A3P31_03325	SSF46785	"Winged helix" DNA-binding domain
A3P31_03325	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03330	SSF63411	LuxS/MPP-like metallohydrolase
A3P31_03335	SSF63411	LuxS/MPP-like metallohydrolase
A3P31_03340	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_03345	SSF47413	lambda repressor-like DNA-binding domains
A3P31_03355	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03355	SSF54752	RecA protein, C-terminal domain
A3P31_03360	SSF109604	HD-domain/PDEase-like
A3P31_03360	SSF54791	Eukaryotic type KH-domain (KH-domain type I)
A3P31_03370	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_03370	SSF54980	EF-G C-terminal domain-like
A3P31_03375	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03380	SSF53271	PRTase-like
A3P31_03385	SSF69754	Ribosome binding protein Y (YfiA homologue)
A3P31_03390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03390	SSF81767	Pre-protein crosslinking domain of SecA
A3P31_03390	SSF81886	Helical scaffold and wing domains of SecA
A3P31_03395	SSF75620	Release factor
A3P31_03405	SSF53795	PEP carboxykinase-like
A3P31_03405	SSF75138	HprK N-terminal domain-like
A3P31_03415	SSF48179	6-phosphogluconate dehydrogenase C-terminal domain-like
A3P31_03415	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_03420	SSF51905	FAD/NAD(P)-binding domain
A3P31_03425	SSF57997	Tropomyosin
A3P31_03435	SSF53098	Ribonuclease H-like
A3P31_03445	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_03450	SSF74650	Galactose mutarotase-like
A3P31_03460	SSF47413	lambda repressor-like DNA-binding domains
A3P31_03460	SSF53822	Periplasmic binding protein-like I
A3P31_03475	SSF46689	Homeodomain-like
A3P31_03475	SSF48295	TrpR-like
A3P31_03480	SSF53098	Ribonuclease H-like
A3P31_03485	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_03495	SSF81301	Nucleotidyltransferase
A3P31_03500	SSF47598	Ribbon-helix-helix
A3P31_03505	SSF51445	(Trans)glycosidases
A3P31_03505	SSF52317	Class I glutamine amidotransferase-like
A3P31_03515	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_03515	SSF55060	GHMP Kinase, C-terminal domain
A3P31_03525	SSF74650	Galactose mutarotase-like
A3P31_03530	SSF53738	Phosphoglucomutase, first 3 domains
A3P31_03530	SSF55957	Phosphoglucomutase, C-terminal domain
A3P31_03535	SSF46600	C-terminal UvrC-binding domain of UvrB
A3P31_03535	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03540	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03550	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03555	SSF142338	CofD-like
A3P31_03560	SSF55608	Homing endonucleases
A3P31_03565	SSF52096	ClpP/crotonase
A3P31_03570	SSF103473	MFS general substrate transporter
A3P31_03595	SSF53474	alpha/beta-Hydrolases
A3P31_03610	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_03610	SSF46785	"Winged helix" DNA-binding domain
A3P31_03615	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_03615	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
A3P31_03620	SSF53748	Phosphoglycerate kinase
A3P31_03625	SSF51351	Triosephosphate isomerase (TIM)
A3P31_03630	SSF51604	Enolase C-terminal domain-like
A3P31_03630	SSF54826	Enolase N-terminal domain-like
A3P31_03640	SSF50249	Nucleic acid-binding proteins
A3P31_03645	SSF74982	Small protein B (SmpB)
A3P31_03650	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_03655	SSF46689	Homeodomain-like
A3P31_03660	SSF54518	Tubby C-terminal domain-like
A3P31_03665	SSF56784	HAD-like
A3P31_03670	SSF52141	Uracil-DNA glycosylase-like
A3P31_03675	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
A3P31_03680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03685	SSF53098	Ribonuclease H-like
A3P31_03690	SSF56176	FAD-binding/transporter-associated domain-like
A3P31_03690	SSF56194	Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
A3P31_03695	SSF50331	MOP-like
A3P31_03695	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03700	SSF161098	MetI-like
A3P31_03705	SSF161098	MetI-like
A3P31_03710	SSF53850	Periplasmic binding protein-like II
A3P31_03715	SSF143597	YojJ-like
A3P31_03725	SSF53738	Phosphoglucomutase, first 3 domains
A3P31_03725	SSF55957	Phosphoglucomutase, C-terminal domain
A3P31_03730	SSF56784	HAD-like
A3P31_03755	SSF53474	alpha/beta-Hydrolases
A3P31_03760	SSF53807	"Helical backbone" metal receptor
A3P31_03765	SSF102645	CoaB-like
A3P31_03765	SSF52507	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
A3P31_03775	SSF75625	YebC-like
A3P31_03780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03790	SSF54523	Pili subunits
A3P31_03810	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_03815	SSF53067	Actin-like ATPase domain
A3P31_03825	SSF75005	Arabinanase/levansucrase/invertase
A3P31_03830	SSF51126	Pectin lyase-like
A3P31_03845	SSF51182	RmlC-like cupins
A3P31_03855	SSF46894	C-terminal effector domain of the bipartite response regulators
A3P31_03855	SSF52172	CheY-like
A3P31_03860	SSF158472	HAMP domain-like
A3P31_03860	SSF47384	Homodimeric domain of signal transducing histidine kinase
A3P31_03860	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_03865	SSF53649	Alkaline phosphatase-like
A3P31_03875	SSF53697	SIS domain
A3P31_03900	SSF56601	beta-lactamase/transpeptidase-like
A3P31_03905	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_03910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03910	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
A3P31_03915	SSF75620	Release factor
A3P31_03920	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_03925	SSF55821	YrdC/RibB
A3P31_03930	SSF53271	PRTase-like
A3P31_03935	SSF81336	F1F0 ATP synthase subunit A
A3P31_03940	SSF81333	F1F0 ATP synthase subunit C
A3P31_03950	SSF47928	N-terminal domain of the delta subunit of the F1F0-ATP synthase
A3P31_03955	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
A3P31_03955	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
A3P31_03955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03960	SSF52943	ATP synthase (F1-ATPase), gamma subunit
A3P31_03965	SSF47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase
A3P31_03965	SSF50615	N-terminal domain of alpha and beta subunits of F1 ATP synthase
A3P31_03965	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_03970	SSF46604	Epsilon subunit of F1F0-ATP synthase C-terminal domain
A3P31_03970	SSF51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain
A3P31_03980	SSF53067	Actin-like ATPase domain
A3P31_04005	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_04015	SSF48019	post-AAA+ oligomerization domain-like
A3P31_04015	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04020	SSF160515	YueI-like
A3P31_04025	SSF55174	Alpha-L RNA-binding motif
A3P31_04035	SSF53383	PLP-dependent transferases
A3P31_04040	SSF143437	THUMP domain-like
A3P31_04040	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_04045	SSF55120	Pseudouridine synthase
A3P31_04045	SSF55174	Alpha-L RNA-binding motif
A3P31_04055	SSF56784	HAD-like
A3P31_04055	SSF81653	Calcium ATPase, transduction domain A
A3P31_04055	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
A3P31_04055	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_04060	SSF46589	tRNA-binding arm
A3P31_04060	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_04060	SSF50677	ValRS/IleRS/LeuRS editing domain
A3P31_04060	SSF52374	Nucleotidylyl transferase
A3P31_04065	SSF53244	MurD-like peptide ligases, peptide-binding domain
A3P31_04065	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_04070	SSF56784	HAD-like
A3P31_04080	SSF53067	Actin-like ATPase domain
A3P31_04105	SSF89447	AbrB/MazE/MraZ-like
A3P31_04110	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_04110	SSF81799	Putative methyltransferase TM0872, insert domain
A3P31_04120	SSF54184	Penicillin-binding protein 2x (pbp-2x), c-terminal domain
A3P31_04120	SSF56519	Penicillin binding protein dimerisation domain
A3P31_04120	SSF56601	beta-lactamase/transpeptidase-like
A3P31_04130	SSF51984	MurCD N-terminal domain
A3P31_04130	SSF53244	MurD-like peptide ligases, peptide-binding domain
A3P31_04130	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_04135	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_04145	SSF53067	Actin-like ATPase domain
A3P31_04150	SSF52490	Tubulin nucleotide-binding domain-like
A3P31_04150	SSF55307	Tubulin C-terminal domain-like
A3P31_04165	SSF55174	Alpha-L RNA-binding motif
A3P31_04170	SSF47162	Apolipoprotein
A3P31_04175	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_04175	SSF50677	ValRS/IleRS/LeuRS editing domain
A3P31_04175	SSF52374	Nucleotidylyl transferase
A3P31_04180	SSF50249	Nucleic acid-binding proteins
A3P31_04185	SSF55811	Nudix
A3P31_04195	SSF53167	Purine and uridine phosphorylases
A3P31_04200	SSF53383	PLP-dependent transferases
A3P31_04205	SSF160800	Lp2179-like
A3P31_04210	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_04215	SSF53254	Phosphoglycerate mutase-like
A3P31_04220	SSF48452	TPR-like
A3P31_04225	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04235	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_04245	SSF56420	Peptide deformylase
A3P31_04255	SSF50447	Translation proteins
A3P31_04255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04255	SSF54980	EF-G C-terminal domain-like
A3P31_04270	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_04275	SSF52374	Nucleotidylyl transferase
A3P31_04280	SSF50156	PDZ domain-like
A3P31_04280	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_04285	SSF47781	RuvA domain 2-like
A3P31_04290	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_04295	SSF48019	post-AAA+ oligomerization domain-like
A3P31_04295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04300	SSF46992	Ribosomal protein S20
A3P31_04305	SSF47060	S15/NS1 RNA-binding domain
A3P31_04310	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_04320	SSF50447	Translation proteins
A3P31_04320	SSF50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
A3P31_04320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04325	SSF102735	Trigger factor ribosome-binding domain
A3P31_04325	SSF109998	Triger factor/SurA peptide-binding domain-like
A3P31_04325	SSF54534	FKBP-like
A3P31_04330	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04330	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
A3P31_04335	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04340	SSF52788	Phosphotyrosine protein phosphatases I
A3P31_04355	SSF52833	Thioredoxin-like
A3P31_04390	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04395	SSF89550	PHP domain-like
A3P31_04405	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_04410	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_04415	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_04420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04425	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_04440	SSF51971	Nucleotide-binding domain
A3P31_04440	SSF54373	FAD-linked reductases, C-terminal domain
A3P31_04510	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04515	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_04535	SSF46785	"Winged helix" DNA-binding domain
A3P31_04535	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_04535	SSF56112	Protein kinase-like (PK-like)
A3P31_04540	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_04570	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04585	SSF143430	TTP0101/SSO1404-like
A3P31_04595	SSF46689	Homeodomain-like
A3P31_04595	SSF53098	Ribonuclease H-like
A3P31_04610	SSF46689	Homeodomain-like
A3P31_04610	SSF53098	Ribonuclease H-like
A3P31_04635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04660	SSF117987	CRISPR-associated protein
A3P31_04670	SSF53098	Ribonuclease H-like
A3P31_04685	SSF55811	Nudix
A3P31_04715	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_04720	SSF56349	DNA breaking-rejoining enzymes
A3P31_04730	SSF53590	Nucleoside hydrolase
A3P31_04735	SSF46600	C-terminal UvrC-binding domain of UvrB
A3P31_04735	SSF47781	RuvA domain 2-like
A3P31_04735	SSF82771	GIY-YIG endonuclease
A3P31_04740	SSF102741	Obg GTP-binding protein C-terminal domain
A3P31_04740	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04740	SSF82051	Obg GTP-binding protein N-terminal domain
A3P31_04745	SSF52266	SGNH hydrolase
A3P31_04750	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_04755	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_04765	SSF57829	Zn-binding ribosomal proteins
A3P31_04770	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
A3P31_04770	SSF56300	Metallo-dependent phosphatases
A3P31_04780	SSF89550	PHP domain-like
A3P31_04790	SSF53784	Phosphofructokinase
A3P31_04795	SSF50800	PK beta-barrel domain-like
A3P31_04795	SSF51621	Phosphoenolpyruvate/pyruvate domain
A3P31_04795	SSF52935	PK C-terminal domain-like
A3P31_04800	SSF50249	Nucleic acid-binding proteins
A3P31_04805	SSF56349	DNA breaking-rejoining enzymes
A3P31_04820	SSF46785	"Winged helix" DNA-binding domain
A3P31_04825	SSF55120	Pseudouridine synthase
A3P31_04825	SSF55174	Alpha-L RNA-binding motif
A3P31_04830	SSF54106	LysM domain
A3P31_04840	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04845	SSF50249	Nucleic acid-binding proteins
A3P31_04850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04855	SSF47729	IHF-like DNA-binding proteins
A3P31_04860	SSF48452	TPR-like
A3P31_04865	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04875	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_04880	SSF116734	DNA methylase specificity domain
A3P31_04885	SSF52467	DHS-like NAD/FAD-binding domain
A3P31_04895	SSF55811	Nudix
A3P31_04900	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04900	SSF56024	Phospholipase D/nuclease
A3P31_04915	SSF81301	Nucleotidyltransferase
A3P31_04915	SSF81891	Poly A polymerase C-terminal region-like
A3P31_04925	SSF82549	DAK1/DegV-like
A3P31_04930	SSF140652	YozE-like
A3P31_04935	SSF47090	PGBD-like
A3P31_04935	SSF50156	PDZ domain-like
A3P31_04935	SSF52096	ClpP/crotonase
A3P31_04940	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04945	SSF53098	Ribonuclease H-like
A3P31_04950	SSF102405	MCP/YpsA-like
A3P31_04955	SSF56712	Prokaryotic type I DNA topoisomerase
A3P31_04955	SSF57783	Zinc beta-ribbon
A3P31_04960	SSF51905	FAD/NAD(P)-binding domain
A3P31_04965	SSF56349	DNA breaking-rejoining enzymes
A3P31_04970	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
A3P31_04975	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_04980	SSF74650	Galactose mutarotase-like
A3P31_04985	SSF53850	Periplasmic binding protein-like II
A3P31_05020	SSF46689	Homeodomain-like
A3P31_05020	SSF53098	Ribonuclease H-like
A3P31_05025	SSF50475	FMN-binding split barrel
A3P31_05030	SSF52467	DHS-like NAD/FAD-binding domain
A3P31_05030	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
A3P31_05035	SSF117856	AF0104/ALDC/Ptd012-like
A3P31_05045	SSF51430	NAD(P)-linked oxidoreductase
A3P31_05050	SSF56784	HAD-like
A3P31_05055	SSF55811	Nudix
A3P31_05090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05095	SSF101960	Stabilizer of iron transporter SufD
A3P31_05100	SSF53383	PLP-dependent transferases
A3P31_05105	SSF82649	SufE/NifU
A3P31_05110	SSF101960	Stabilizer of iron transporter SufD
A3P31_05115	SSF117916	Fe-S cluster assembly (FSCA) domain-like
A3P31_05125	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_05130	SSF53098	Ribonuclease H-like
A3P31_05135	SSF48295	TrpR-like
A3P31_05140	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_05150	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05160	SSF46689	Homeodomain-like
A3P31_05170	SSF54909	Dimeric alpha+beta barrel
A3P31_05175	SSF52833	Thioredoxin-like
A3P31_05195	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_05205	SSF48019	post-AAA+ oligomerization domain-like
A3P31_05205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05225	SSF51161	Trimeric LpxA-like enzymes
A3P31_05235	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_05235	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_05235	SSF56719	Type II DNA topoisomerase
A3P31_05240	SSF101904	GyrA/ParC C-terminal domain-like
A3P31_05240	SSF56719	Type II DNA topoisomerase
A3P31_05250	SSF64182	DHH phosphoesterases
A3P31_05255	SSF46785	"Winged helix" DNA-binding domain
A3P31_05255	SSF47819	HRDC-like
A3P31_05255	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05260	SSF50891	Cyclophilin-like
A3P31_05270	SSF56349	DNA breaking-rejoining enzymes
A3P31_05275	SSF46785	"Winged helix" DNA-binding domain
A3P31_05275	SSF53850	Periplasmic binding protein-like II
A3P31_05285	SSF82549	DAK1/DegV-like
A3P31_05290	SSF46785	"Winged helix" DNA-binding domain
A3P31_05300	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
A3P31_05300	SSF52335	Methylglyoxal synthase-like
A3P31_05300	SSF52440	PreATP-grasp domain
A3P31_05300	SSF56059	Glutathione synthetase ATP-binding domain-like
A3P31_05305	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
A3P31_05305	SSF52317	Class I glutamine amidotransferase-like
A3P31_05310	SSF55120	Pseudouridine synthase
A3P31_05310	SSF55174	Alpha-L RNA-binding motif
A3P31_05320	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05330	SSF82549	DAK1/DegV-like
A3P31_05340	SSF56300	Metallo-dependent phosphatases
A3P31_05345	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_05360	SSF102405	MCP/YpsA-like
A3P31_05365	SSF52980	Restriction endonuclease-like
A3P31_05370	SSF53955	Lysozyme-like
A3P31_05370	SSF56601	beta-lactamase/transpeptidase-like
A3P31_05375	SSF48150	DNA-glycosylase
A3P31_05380	SSF158499	DnaD domain-like
A3P31_05385	SSF50249	Nucleic acid-binding proteins
A3P31_05385	SSF55681	Class II aaRS and biotin synthetases
A3P31_05390	SSF54403	Cystatin/monellin
A3P31_05395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05395	SSF53098	Ribonuclease H-like
A3P31_05400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05400	SSF52980	Restriction endonuclease-like
A3P31_05405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05410	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_05410	SSF55060	GHMP Kinase, C-terminal domain
A3P31_05415	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_05415	SSF55060	GHMP Kinase, C-terminal domain
A3P31_05420	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_05420	SSF55060	GHMP Kinase, C-terminal domain
A3P31_05425	SSF51395	FMN-linked oxidoreductases
A3P31_05430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05430	SSF90123	ABC transporter transmembrane region
A3P31_05435	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05435	SSF90123	ABC transporter transmembrane region
A3P31_05440	SSF103473	MFS general substrate transporter
A3P31_05445	SSF53098	Ribonuclease H-like
A3P31_05450	SSF46689	Homeodomain-like
A3P31_05450	SSF48295	TrpR-like
A3P31_05465	SSF110710	TTHA0583/YokD-like
A3P31_05470	SSF103481	Multidrug resistance efflux transporter EmrE
A3P31_05475	SSF102546	RbsD-like
A3P31_05480	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_05480	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
A3P31_05485	SSF53254	Phosphoglycerate mutase-like
A3P31_05495	SSF53167	Purine and uridine phosphorylases
A3P31_05500	SSF55826	YbaK/ProRS associated domain
A3P31_05505	SSF53167	Purine and uridine phosphorylases
A3P31_05510	SSF53167	Purine and uridine phosphorylases
A3P31_05515	SSF55811	Nudix
A3P31_05520	SSF56112	Protein kinase-like (PK-like)
A3P31_05525	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05540	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_05545	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_05555	SSF56024	Phospholipase D/nuclease
A3P31_05565	SSF52799	(Phosphotyrosine protein) phosphatases II
A3P31_05575	SSF101386	all-alpha NTP pyrophosphatases
A3P31_05585	SSF54197	HIT-like
A3P31_05590	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_05600	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_05610	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05610	SSF90123	ABC transporter transmembrane region
A3P31_05615	SSF55469	FMN-dependent nitroreductase-like
A3P31_05625	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05625	SSF90123	ABC transporter transmembrane region
A3P31_05630	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05630	SSF90123	ABC transporter transmembrane region
A3P31_05635	SSF53098	Ribonuclease H-like
A3P31_05640	SSF117892	Band 7/SPFH domain
A3P31_05650	SSF110738	Glycerate kinase I
A3P31_05660	SSF54427	NTF2-like
A3P31_05665	SSF51395	FMN-linked oxidoreductases
A3P31_05675	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_05685	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_05690	SSF51621	Phosphoenolpyruvate/pyruvate domain
A3P31_05695	SSF52499	Isochorismatase-like hydrolases
A3P31_05700	SSF53271	PRTase-like
A3P31_05705	SSF48108	Carbamoyl phosphate synthetase, large subunit connection domain
A3P31_05705	SSF52335	Methylglyoxal synthase-like
A3P31_05705	SSF52440	PreATP-grasp domain
A3P31_05705	SSF56059	Glutathione synthetase ATP-binding domain-like
A3P31_05710	SSF52021	Carbamoyl phosphate synthetase, small subunit N-terminal domain
A3P31_05710	SSF52317	Class I glutamine amidotransferase-like
A3P31_05715	SSF51338	Composite domain of metallo-dependent hydrolases
A3P31_05715	SSF51556	Metallo-dependent hydrolases
A3P31_05720	SSF53671	Aspartate/ornithine carbamoyltransferase
A3P31_05725	SSF53271	PRTase-like
A3P31_05730	SSF51395	FMN-linked oxidoreductases
A3P31_05735	SSF51366	Ribulose-phoshate binding barrel
A3P31_05740	SSF53271	PRTase-like
A3P31_05745	SSF53474	alpha/beta-Hydrolases
A3P31_05750	SSF56784	HAD-like
A3P31_05760	SSF117782	YbjQ-like
A3P31_05765	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_05780	SSF51306	LexA/Signal peptidase
A3P31_05800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05805	SSF46785	"Winged helix" DNA-binding domain
A3P31_05810	SSF53187	Zn-dependent exopeptidases
A3P31_05810	SSF55031	Bacterial exopeptidase dimerisation domain
A3P31_05815	SSF102705	NIF3 (NGG1p interacting factor 3)-like
A3P31_05820	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_05825	SSF53850	Periplasmic binding protein-like II
A3P31_05830	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05835	SSF161098	MetI-like
A3P31_05840	SSF161098	MetI-like
A3P31_05845	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_05845	SSF88946	Sigma2 domain of RNA polymerase sigma factors
A3P31_05850	SSF56731	DNA primase core
A3P31_05850	SSF57783	Zinc beta-ribbon
A3P31_05855	SSF109604	HD-domain/PDEase-like
A3P31_05860	SSF55681	Class II aaRS and biotin synthetases
A3P31_05865	SSF50249	Nucleic acid-binding proteins
A3P31_05865	SSF57863	ArfGap/RecO-like zinc finger
A3P31_05870	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05870	SSF54814	Prokaryotic type KH domain (KH-domain type II)
A3P31_05875	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_05880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05885	SSF89095	GatB/YqeY motif
A3P31_05895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_05900	SSF117916	Fe-S cluster assembly (FSCA) domain-like
A3P31_05910	SSF143548	Serine metabolism enzymes domain
A3P31_05920	SSF55068	Peptide methionine sulfoxide reductase
A3P31_05935	SSF52266	SGNH hydrolase
A3P31_05940	SSF51316	Mss4-like
A3P31_05945	SSF53383	PLP-dependent transferases
A3P31_05950	SSF50249	Nucleic acid-binding proteins
A3P31_05950	SSF55261	GAD domain-like
A3P31_05950	SSF55681	Class II aaRS and biotin synthetases
A3P31_05955	SSF52954	Class II aaRS ABD-related
A3P31_05955	SSF55681	Class II aaRS and biotin synthetases
A3P31_05960	SSF69500	DTD-like
A3P31_05965	SSF109604	HD-domain/PDEase-like
A3P31_05965	SSF55021	ACT-like
A3P31_05965	SSF81271	TGS-like
A3P31_05965	SSF81301	Nucleotidyltransferase
A3P31_05975	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_05980	SSF55826	YbaK/ProRS associated domain
A3P31_05990	SSF56784	HAD-like
A3P31_05990	SSF81653	Calcium ATPase, transduction domain A
A3P31_05990	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_05995	SSF53774	Glutaminase/Asparaginase
A3P31_06005	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_06005	SSF56327	LDH C-terminal domain-like
A3P31_06010	SSF51905	FAD/NAD(P)-binding domain
A3P31_06010	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
A3P31_06015	SSF48557	L-aspartase-like
A3P31_06020	SSF161098	MetI-like
A3P31_06025	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06025	SSF55021	ACT-like
A3P31_06030	SSF53850	Periplasmic binding protein-like II
A3P31_06040	SSF53098	Ribonuclease H-like
A3P31_06040	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_06045	SSF57884	Ada DNA repair protein, N-terminal domain (N-Ada 10)
A3P31_06050	SSF161270	PspA lactotransferrin-binding region
A3P31_06055	SSF47413	lambda repressor-like DNA-binding domains
A3P31_06065	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
A3P31_06070	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06080	SSF51604	Enolase C-terminal domain-like
A3P31_06080	SSF54826	Enolase N-terminal domain-like
A3P31_06085	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
A3P31_06095	SSF46785	"Winged helix" DNA-binding domain
A3P31_06095	SSF53850	Periplasmic binding protein-like II
A3P31_06100	SSF56784	HAD-like
A3P31_06100	SSF81653	Calcium ATPase, transduction domain A
A3P31_06100	SSF81660	Metal cation-transporting ATPase, ATP-binding domain N
A3P31_06100	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_06105	SSF103473	MFS general substrate transporter
A3P31_06110	SSF53597	Dihydrofolate reductase-like
A3P31_06115	SSF55831	Thymidylate synthase/dCMP hydroxymethylase
A3P31_06120	SSF56024	Phospholipase D/nuclease
A3P31_06130	SSF53098	Ribonuclease H-like
A3P31_06135	SSF46689	Homeodomain-like
A3P31_06135	SSF48295	TrpR-like
A3P31_06140	SSF53271	PRTase-like
A3P31_06145	SSF64182	DHH phosphoesterases
A3P31_06150	SSF63817	Sortase
A3P31_06155	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06155	SSF54980	EF-G C-terminal domain-like
A3P31_06160	SSF46565	Chaperone J-domain
A3P31_06160	SSF49493	HSP40/DnaJ peptide-binding domain
A3P31_06160	SSF57938	DnaJ/Hsp40 cysteine-rich domain
A3P31_06165	SSF100920	Heat shock protein 70kD (HSP70), peptide-binding domain
A3P31_06165	SSF100934	Heat shock protein 70kD (HSP70), C-terminal subdomain
A3P31_06165	SSF53067	Actin-like ATPase domain
A3P31_06170	SSF51064	Head domain of nucleotide exchange factor GrpE
A3P31_06170	SSF58014	Coiled-coil domain of nucleotide exchange factor GrpE
A3P31_06175	SSF46785	"Winged helix" DNA-binding domain
A3P31_06175	SSF55781	GAF domain-like
A3P31_06180	SSF55136	Probable bacterial effector-binding domain
A3P31_06185	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06190	SSF52374	Nucleotidylyl transferase
A3P31_06190	SSF82114	Riboflavin kinase-like
A3P31_06195	SSF55120	Pseudouridine synthase
A3P31_06200	SSF89919	Ribosome-binding factor A, RbfA
A3P31_06205	SSF50447	Translation proteins
A3P31_06205	SSF52156	Initiation factor IF2/eIF5b, domain 3
A3P31_06205	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06210	SSF55315	L30e-like
A3P31_06215	SSF64376	YlxR-like
A3P31_06220	SSF50249	Nucleic acid-binding proteins
A3P31_06220	SSF54814	Prokaryotic type KH domain (KH-domain type II)
A3P31_06220	SSF69705	Transcription factor NusA, N-terminal domain
A3P31_06225	SSF74942	YhbC-like, C-terminal domain
A3P31_06225	SSF75420	YhbC-like, N-terminal domain
A3P31_06230	SSF53098	Ribonuclease H-like
A3P31_06235	SSF52954	Class II aaRS ABD-related
A3P31_06235	SSF55681	Class II aaRS and biotin synthetases
A3P31_06235	SSF55826	YbaK/ProRS associated domain
A3P31_06240	SSF50156	PDZ domain-like
A3P31_06250	SSF64005	Undecaprenyl diphosphate synthase
A3P31_06255	SSF55194	Ribosome recycling factor, RRF
A3P31_06260	SSF53633	Carbamate kinase-like
A3P31_06265	SSF46934	UBA-like
A3P31_06265	SSF54713	Elongation factor Ts (EF-Ts), dimerisation domain
A3P31_06270	SSF52313	Ribosomal protein S2
A3P31_06275	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_06275	SSF82771	GIY-YIG endonuclease
A3P31_06280	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
A3P31_06285	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_06290	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06290	SSF90123	ABC transporter transmembrane region
A3P31_06295	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06295	SSF90123	ABC transporter transmembrane region
A3P31_06305	SSF158221	YnzC-like
A3P31_06310	SSF46785	"Winged helix" DNA-binding domain
A3P31_06310	SSF51306	LexA/Signal peptidase
A3P31_06315	SSF52141	Uracil-DNA glycosylase-like
A3P31_06320	SSF55811	Nudix
A3P31_06325	SSF51306	LexA/Signal peptidase
A3P31_06330	SSF50104	Translation proteins SH3-like domain
A3P31_06335	SSF75217	alpha/beta knot
A3P31_06340	SSF50346	PRC-barrel domain
A3P31_06340	SSF50447	Translation proteins
A3P31_06345	SSF54565	Ribosomal protein S16
A3P31_06350	SSF47446	Signal peptide-binding domain
A3P31_06350	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06355	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_06365	SSF47364	Domain of the SRP/SRP receptor G-proteins
A3P31_06365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06370	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06370	SSF75553	Smc hinge domain
A3P31_06370	SSF90257	Myosin rod fragments
A3P31_06375	SSF54768	dsRNA-binding domain-like
A3P31_06375	SSF69065	RNase III domain-like
A3P31_06385	SSF53850	Periplasmic binding protein-like II
A3P31_06390	SSF161098	MetI-like
A3P31_06395	SSF161098	MetI-like
A3P31_06400	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06405	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06410	SSF47336	ACP-like
A3P31_06415	SSF53659	Isocitrate/Isopropylmalate dehydrogenase-like
A3P31_06420	SSF50249	Nucleic acid-binding proteins
A3P31_06420	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06425	SSF101473	DhaL-like
A3P31_06435	SSF143800	L28p-like
A3P31_06440	SSF63999	Thiamin pyrophosphokinase, catalytic domain
A3P31_06445	SSF51366	Ribulose-phoshate binding barrel
A3P31_06450	SSF50249	Nucleic acid-binding proteins
A3P31_06450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06455	SSF56112	Protein kinase-like (PK-like)
A3P31_06460	SSF81606	PP2C-like
A3P31_06465	SSF48013	NusB-like
A3P31_06465	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_06470	SSF50486	FMT C-terminal domain-like
A3P31_06470	SSF53328	Formyltransferase
A3P31_06475	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06480	SSF63562	RPB6/omega subunit-like
A3P31_06485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06495	SSF46689	Homeodomain-like
A3P31_06495	SSF48295	TrpR-like
A3P31_06500	SSF53098	Ribonuclease H-like
A3P31_06505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06510	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_06510	SSF55174	Alpha-L RNA-binding motif
A3P31_06515	SSF48576	Terpenoid synthases
A3P31_06520	SSF116842	XseB-like
A3P31_06530	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_06530	SSF53223	Aminoacid dehydrogenase-like, N-terminal domain
A3P31_06535	SSF48013	NusB-like
A3P31_06545	SSF50104	Translation proteins SH3-like domain
A3P31_06545	SSF50249	Nucleic acid-binding proteins
A3P31_06550	SSF53092	Creatinase/prolidase N-terminal domain
A3P31_06550	SSF55920	Creatinase/aminopeptidase
A3P31_06555	SSF110324	Ribosomal L27 protein-like
A3P31_06560	SSF141091	L21p-like
A3P31_06565	SSF52833	Thioredoxin-like
A3P31_06590	SSF55331	Tautomerase/MIF
A3P31_06600	SSF53613	Ribokinase-like
A3P31_06615	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_06625	SSF103473	MFS general substrate transporter
A3P31_06630	SSF53474	alpha/beta-Hydrolases
A3P31_06635	SSF46689	Homeodomain-like
A3P31_06635	SSF51215	Regulatory protein AraC
A3P31_06640	SSF53067	Actin-like ATPase domain
A3P31_06650	SSF46689	Homeodomain-like
A3P31_06650	SSF53697	SIS domain
A3P31_06655	SSF51445	(Trans)glycosidases
A3P31_06675	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06685	SSF54001	Cysteine proteinases
A3P31_06690	SSF50475	FMN-binding split barrel
A3P31_06695	SSF46689	Homeodomain-like
A3P31_06695	SSF53098	Ribonuclease H-like
A3P31_06705	SSF46955	Putative DNA-binding domain
A3P31_06710	SSF103473	MFS general substrate transporter
A3P31_06725	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_06730	SSF140931	Fic-like
A3P31_06740	SSF53697	SIS domain
A3P31_06740	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
A3P31_06755	SSF56784	HAD-like
A3P31_06760	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_06760	SSF63737	Leukotriene A4 hydrolase N-terminal domain
A3P31_06765	SSF49785	Galactose-binding domain-like
A3P31_06765	SSF53474	alpha/beta-Hydrolases
A3P31_06765	SSF81761	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain
A3P31_06770	SSF47384	Homodimeric domain of signal transducing histidine kinase
A3P31_06770	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_06775	SSF46894	C-terminal effector domain of the bipartite response regulators
A3P31_06775	SSF52172	CheY-like
A3P31_06780	SSF81301	Nucleotidyltransferase
A3P31_06790	SSF82784	OsmC-like
A3P31_06795	SSF161098	MetI-like
A3P31_06795	SSF53850	Periplasmic binding protein-like II
A3P31_06800	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06805	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_06815	SSF55920	Creatinase/aminopeptidase
A3P31_06820	SSF52218	Flavoproteins
A3P31_06830	SSF53756	UDP-Glycosyltransferase/glycogen phosphorylase
A3P31_06850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06855	SSF51445	(Trans)glycosidases
A3P31_06865	SSF53271	PRTase-like
A3P31_06870	SSF54631	CBS-domain pair
A3P31_06870	SSF56176	FAD-binding/transporter-associated domain-like
A3P31_06880	SSF55469	FMN-dependent nitroreductase-like
A3P31_06885	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
A3P31_06895	SSF82919	Zn-finger domain of Sec23/24
A3P31_06900	SSF143422	Transposase IS200-like
A3P31_06920	SSF109797	Bacteriocin immunity protein-like
A3P31_06925	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06925	SSF90123	ABC transporter transmembrane region
A3P31_06935	SSF56112	Protein kinase-like (PK-like)
A3P31_06940	SSF46785	"Winged helix" DNA-binding domain
A3P31_06940	SSF64288	Chorismate lyase-like
A3P31_06945	SSF53590	Nucleoside hydrolase
A3P31_06950	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_06950	SSF75445	D-ribose-5-phosphate isomerase (RpiA), lid domain
A3P31_06955	SSF53613	Ribokinase-like
A3P31_06960	SSF47240	Ferritin-like
A3P31_06970	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_06975	SSF109755	PhoU-like
A3P31_06980	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06985	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_06990	SSF161098	MetI-like
A3P31_06995	SSF161098	MetI-like
A3P31_07000	SSF53850	Periplasmic binding protein-like II
A3P31_07005	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_07010	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07015	SSF161098	MetI-like
A3P31_07015	SSF53850	Periplasmic binding protein-like II
A3P31_07045	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07065	SSF161098	MetI-like
A3P31_07070	SSF161098	MetI-like
A3P31_07075	SSF53850	Periplasmic binding protein-like II
A3P31_07080	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07085	SSF53850	Periplasmic binding protein-like II
A3P31_07090	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07090	SSF90123	ABC transporter transmembrane region
A3P31_07095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07095	SSF90123	ABC transporter transmembrane region
A3P31_07100	SSF46785	"Winged helix" DNA-binding domain
A3P31_07105	SSF53474	alpha/beta-Hydrolases
A3P31_07110	SSF103473	MFS general substrate transporter
A3P31_07120	SSF103473	MFS general substrate transporter
A3P31_07125	SSF51445	(Trans)glycosidases
A3P31_07125	SSF52317	Class I glutamine amidotransferase-like
A3P31_07140	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07150	SSF101821	Aminopeptidase/glucanase lid domain
A3P31_07150	SSF53187	Zn-dependent exopeptidases
A3P31_07160	SSF46785	"Winged helix" DNA-binding domain
A3P31_07170	SSF103473	MFS general substrate transporter
A3P31_07190	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
A3P31_07200	SSF56601	beta-lactamase/transpeptidase-like
A3P31_07205	SSF100950	NagB/RpiA/CoA transferase-like
A3P31_07205	SSF46785	"Winged helix" DNA-binding domain
A3P31_07220	SSF56784	HAD-like
A3P31_07240	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07245	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_07260	SSF47090	PGBD-like
A3P31_07260	SSF51445	(Trans)glycosidases
A3P31_07270	SSF103473	MFS general substrate transporter
A3P31_07275	SSF103473	MFS general substrate transporter
A3P31_07280	SSF81338	Aquaporin-like
A3P31_07285	SSF103473	MFS general substrate transporter
A3P31_07295	SSF48150	DNA-glycosylase
A3P31_07310	SSF55781	GAF domain-like
A3P31_07315	SSF143422	Transposase IS200-like
A3P31_07325	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_07330	SSF52317	Class I glutamine amidotransferase-like
A3P31_07335	SSF53271	PRTase-like
A3P31_07360	SSF51569	Aldolase
A3P31_07365	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_07365	SSF52374	Nucleotidylyl transferase
A3P31_07365	SSF55190	Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
A3P31_07370	SSF56601	beta-lactamase/transpeptidase-like
A3P31_07375	SSF53613	Ribokinase-like
A3P31_07395	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_07395	SSF50677	ValRS/IleRS/LeuRS editing domain
A3P31_07395	SSF52374	Nucleotidylyl transferase
A3P31_07400	SSF48317	Acid phosphatase/Vanadium-dependent haloperoxidase
A3P31_07405	SSF46689	Homeodomain-like
A3P31_07405	SSF48295	TrpR-like
A3P31_07410	SSF53098	Ribonuclease H-like
A3P31_07425	SSF47413	lambda repressor-like DNA-binding domains
A3P31_07430	SSF47413	lambda repressor-like DNA-binding domains
A3P31_07450	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07455	SSF47413	lambda repressor-like DNA-binding domains
A3P31_07465	SSF56349	DNA breaking-rejoining enzymes
A3P31_07470	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_07475	SSF116734	DNA methylase specificity domain
A3P31_07485	SSF46785	"Winged helix" DNA-binding domain
A3P31_07490	SSF46689	Homeodomain-like
A3P31_07490	SSF48295	TrpR-like
A3P31_07495	SSF53098	Ribonuclease H-like
A3P31_07500	SSF103473	MFS general substrate transporter
A3P31_07505	SSF55973	S-adenosylmethionine synthetase
A3P31_07545	SSF50249	Nucleic acid-binding proteins
A3P31_07550	SSF51905	FAD/NAD(P)-binding domain
A3P31_07565	SSF56784	HAD-like
A3P31_07575	SSF55816	5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
A3P31_07575	SSF56300	Metallo-dependent phosphatases
A3P31_07585	SSF51695	PLC-like phosphodiesterases
A3P31_07590	SSF53187	Zn-dependent exopeptidases
A3P31_07590	SSF55031	Bacterial exopeptidase dimerisation domain
A3P31_07595	SSF53955	Lysozyme-like
A3P31_07595	SSF56601	beta-lactamase/transpeptidase-like
A3P31_07600	SSF47413	lambda repressor-like DNA-binding domains
A3P31_07600	SSF53822	Periplasmic binding protein-like I
A3P31_07605	SSF53092	Creatinase/prolidase N-terminal domain
A3P31_07605	SSF55920	Creatinase/aminopeptidase
A3P31_07620	SSF50182	Sm-like ribonucleoproteins
A3P31_07620	SSF82689	Mechanosensitive channel protein MscS (YggB), C-terminal domain
A3P31_07620	SSF82861	Mechanosensitive channel protein MscS (YggB), transmembrane region
A3P31_07625	SSF53067	Actin-like ATPase domain
A3P31_07630	SSF52972	ITPase-like
A3P31_07635	SSF53681	Aspartate/glutamate racemase
A3P31_07640	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport
A3P31_07645	SSF52833	Thioredoxin-like
A3P31_07650	SSF160443	SMR domain-like
A3P31_07650	SSF48334	DNA repair protein MutS, domain III
A3P31_07650	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07665	SSF53098	Ribonuclease H-like
A3P31_07675	SSF101353	Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)
A3P31_07675	SSF50447	Translation proteins
A3P31_07675	SSF55186	ThrRS/AlaRS common domain
A3P31_07675	SSF55681	Class II aaRS and biotin synthetases
A3P31_07680	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07685	SSF64182	DHH phosphoesterases
A3P31_07690	SSF100879	Lesion bypass DNA polymerase (Y-family), little finger domain
A3P31_07690	SSF56672	DNA/RNA polymerases
A3P31_07695	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_07695	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
A3P31_07705	SSF46785	"Winged helix" DNA-binding domain
A3P31_07705	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07710	SSF46929	DNA helicase RuvA subunit, C-terminal domain
A3P31_07710	SSF47781	RuvA domain 2-like
A3P31_07710	SSF50249	Nucleic acid-binding proteins
A3P31_07715	SSF118116	DNA mismatch repair protein MutL
A3P31_07715	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_07715	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_07720	SSF48334	DNA repair protein MutS, domain III
A3P31_07720	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07720	SSF53150	DNA repair protein MutS, domain II
A3P31_07720	SSF55271	DNA repair protein MutS, domain I
A3P31_07735	SSF53098	Ribonuclease H-like
A3P31_07735	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_07740	SSF90123	ABC transporter transmembrane region
A3P31_07745	SSF48592	GroEL equatorial domain-like
A3P31_07745	SSF52029	GroEL apical domain-like
A3P31_07750	SSF50129	GroES-like
A3P31_07765	SSF52794	PTS system IIB component-like
A3P31_07770	SSF102405	MCP/YpsA-like
A3P31_07775	SSF46785	"Winged helix" DNA-binding domain
A3P31_07775	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_07780	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07785	SSF49899	Concanavalin A-like lectins/glucanases
A3P31_07785	SSF75005	Arabinanase/levansucrase/invertase
A3P31_07790	SSF51261	Duplicated hybrid motif
A3P31_07790	SSF55604	Glucose permease domain IIB
A3P31_07795	SSF51445	(Trans)glycosidases
A3P31_07795	SSF52279	Beta-D-glucan exohydrolase, C-terminal domain
A3P31_07800	SSF46689	Homeodomain-like
A3P31_07800	SSF51182	RmlC-like cupins
A3P31_07810	SSF55811	Nudix
A3P31_07815	SSF48557	L-aspartase-like
A3P31_07820	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07825	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
A3P31_07840	SSF57997	Tropomyosin
A3P31_07845	SSF53067	Actin-like ATPase domain
A3P31_07850	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_07855	SSF53067	Actin-like ATPase domain
A3P31_07865	SSF54637	Thioesterase/thiol ester dehydrase-isomerase
A3P31_07870	SSF53790	Tetrapyrrole methylase
A3P31_07880	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07885	SSF54913	GlnB-like
A3P31_07890	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07900	SSF111304	Recombination protein RecR
A3P31_07905	SSF82607	YbaB-like
A3P31_07910	SSF48019	post-AAA+ oligomerization domain-like
A3P31_07910	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07920	SSF53927	Cytidine deaminase-like
A3P31_07940	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_07950	SSF81324	Voltage-gated potassium channels
A3P31_07955	SSF48300	Ribosomal protein L7/12, oligomerisation (N-terminal) domain
A3P31_07955	SSF54736	ClpS-like
A3P31_07960	SSF160369	Ribosomal protein L10-like
A3P31_07965	SSF53850	Periplasmic binding protein-like II
A3P31_07970	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_07975	SSF161098	MetI-like
A3P31_07985	SSF56808	Ribosomal protein L1
A3P31_07990	SSF46906	Ribosomal protein L11, C-terminal domain
A3P31_07990	SSF54747	Ribosomal L11/L12e N-terminal domain
A3P31_07995	SSF50104	Translation proteins SH3-like domain
A3P31_07995	SSF82679	N-utilization substance G protein NusG, N-terminal domain
A3P31_08005	SSF57829	Zn-binding ribosomal proteins
A3P31_08010	SSF48576	Terpenoid synthases
A3P31_08015	SSF103473	MFS general substrate transporter
A3P31_08020	SSF52518	Thiamin diphosphate-binding fold (THDP-binding)
A3P31_08020	SSF52922	TK C-terminal domain-like
A3P31_08025	SSF53067	Actin-like ATPase domain
A3P31_08035	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_08035	SSF88946	Sigma2 domain of RNA polymerase sigma factors
A3P31_08040	SSF55315	L30e-like
A3P31_08040	SSF75217	alpha/beta knot
A3P31_08045	SSF69065	RNase III domain-like
A3P31_08050	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_08050	SSF52374	Nucleotidylyl transferase
A3P31_08055	SSF48163	An anticodon-binding domain of class I aminoacyl-tRNA synthetases
A3P31_08055	SSF52374	Nucleotidylyl transferase
A3P31_08060	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08060	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_08065	SSF51283	dUTPase-like
A3P31_08075	SSF54001	Cysteine proteinases
A3P31_08095	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08100	SSF53254	Phosphoglycerate mutase-like
A3P31_08115	SSF160240	Cation efflux protein cytoplasmic domain-like
A3P31_08115	SSF161111	Cation efflux protein transmembrane domain-like
A3P31_08120	SSF46785	"Winged helix" DNA-binding domain
A3P31_08125	SSF53254	Phosphoglycerate mutase-like
A3P31_08130	SSF52317	Class I glutamine amidotransferase-like
A3P31_08135	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_08145	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_08160	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08170	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08180	SSF56349	DNA breaking-rejoining enzymes
A3P31_08185	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_08190	SSF52161	Ribosomal protein L13
A3P31_08195	SSF55120	Pseudouridine synthase
A3P31_08210	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08215	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08220	SSF64263	Prokaryotic ribosomal protein L17
A3P31_08225	SSF47789	C-terminal domain of RNA polymerase alpha subunit
A3P31_08225	SSF55257	RBP11-like subunits of RNA polymerase
A3P31_08225	SSF56553	Insert subdomain of RNA polymerase alpha subunit
A3P31_08230	SSF53137	Translational machinery components
A3P31_08235	SSF46946	S13-like H2TH domain
A3P31_08240	SSF57840	Ribosomal protein L36
A3P31_08245	SSF50249	Nucleic acid-binding proteins
A3P31_08250	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08255	SSF103491	Preprotein translocase SecY subunit
A3P31_08260	SSF52080	Ribosomal proteins L15p and L18e
A3P31_08265	SSF55129	Ribosomal protein L30p/L7e
A3P31_08270	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_08270	SSF54768	dsRNA-binding domain-like
A3P31_08275	SSF53137	Translational machinery components
A3P31_08280	SSF56053	Ribosomal protein L6
A3P31_08285	SSF56047	Ribosomal protein S8
A3P31_08290	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
A3P31_08295	SSF55282	RL5-like
A3P31_08300	SSF50104	Translation proteins SH3-like domain
A3P31_08305	SSF50193	Ribosomal protein L14
A3P31_08310	SSF50249	Nucleic acid-binding proteins
A3P31_08315	SSF46561	Ribosomal protein L29 (L29p)
A3P31_08320	SSF54686	Ribosomal protein L16p/L10e
A3P31_08325	SSF54814	Prokaryotic type KH domain (KH-domain type II)
A3P31_08325	SSF54821	Ribosomal protein S3 C-terminal domain
A3P31_08330	SSF54843	Ribosomal protein L22
A3P31_08335	SSF54570	Ribosomal protein S19
A3P31_08340	SSF50104	Translation proteins SH3-like domain
A3P31_08340	SSF50249	Nucleic acid-binding proteins
A3P31_08345	SSF54189	Ribosomal proteins S24e, L23 and L15e
A3P31_08350	SSF52166	Ribosomal protein L4
A3P31_08355	SSF50447	Translation proteins
A3P31_08360	SSF54999	Ribosomal protein S10
A3P31_08365	SSF50447	Translation proteins
A3P31_08365	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08365	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_08365	SSF54980	EF-G C-terminal domain-like
A3P31_08370	SSF47973	Ribosomal protein S7
A3P31_08375	SSF50249	Nucleic acid-binding proteins
A3P31_08385	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
A3P31_08390	SSF64484	beta and beta-prime subunits of DNA dependent RNA-polymerase
A3P31_08395	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08395	SSF81923	Double Clp-N motif
A3P31_08410	SSF50249	Nucleic acid-binding proteins
A3P31_08410	SSF55681	Class II aaRS and biotin synthetases
A3P31_08415	SSF51395	FMN-linked oxidoreductases
A3P31_08420	SSF118352	HSP33 redox switch-like
A3P31_08420	SSF64397	Hsp33 domain
A3P31_08430	SSF140990	FtsH protease domain-like
A3P31_08430	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08435	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_08440	SSF50249	Nucleic acid-binding proteins
A3P31_08450	SSF55174	Alpha-L RNA-binding motif
A3P31_08455	SSF141259	CarD-like
A3P31_08455	SSF143517	TRCF domain-like
A3P31_08455	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08460	SSF53178	Peptidyl-tRNA hydrolase-like
A3P31_08465	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_08465	SSF56327	LDH C-terminal domain-like
A3P31_08470	SSF54631	CBS-domain pair
A3P31_08475	SSF50621	Alanine racemase C-terminal domain-like
A3P31_08475	SSF51419	PLP-binding barrel
A3P31_08480	SSF56214	4'-phosphopantetheinyl transferase
A3P31_08485	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08490	SSF53244	MurD-like peptide ligases, peptide-binding domain
A3P31_08490	SSF53623	MurD-like peptide ligases, catalytic domain
A3P31_08490	SSF63418	MurE/MurF N-terminal domain
A3P31_08495	SSF143800	L28p-like
A3P31_08505	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08515	SSF53822	Periplasmic binding protein-like I
A3P31_08520	SSF53383	PLP-dependent transferases
A3P31_08525	SSF51445	(Trans)glycosidases
A3P31_08530	SSF51445	(Trans)glycosidases
A3P31_08535	SSF103473	MFS general substrate transporter
A3P31_08535	SSF51261	Duplicated hybrid motif
A3P31_08540	SSF46689	Homeodomain-like
A3P31_08540	SSF51215	Regulatory protein AraC
A3P31_08550	SSF55469	FMN-dependent nitroreductase-like
A3P31_08555	SSF55469	FMN-dependent nitroreductase-like
A3P31_08560	SSF46785	"Winged helix" DNA-binding domain
A3P31_08590	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
A3P31_08590	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
A3P31_08610	SSF53098	Ribonuclease H-like
A3P31_08620	SSF46955	Putative DNA-binding domain
A3P31_08620	SSF53041	Resolvase-like
A3P31_08625	SSF46689	Homeodomain-like
A3P31_08635	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08650	SSF46955	Putative DNA-binding domain
A3P31_08650	SSF53041	Resolvase-like
A3P31_08655	SSF55729	Acyl-CoA N-acyltransferases (Nat)
A3P31_08665	SSF46689	Homeodomain-like
A3P31_08665	SSF53098	Ribonuclease H-like
A3P31_08675	SSF49777	PEBP-like
A3P31_08680	SSF46689	Homeodomain-like
A3P31_08690	SSF52317	Class I glutamine amidotransferase-like
A3P31_08690	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_08700	SSF53271	PRTase-like
A3P31_08710	SSF55205	EPT/RTPC-like
A3P31_08715	SSF52317	Class I glutamine amidotransferase-like
A3P31_08715	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08725	SSF50814	Lipocalins
A3P31_08730	SSF109604	HD-domain/PDEase-like
A3P31_08735	SSF51011	Glycosyl hydrolase domain
A3P31_08735	SSF51445	(Trans)glycosidases
A3P31_08740	SSF161098	MetI-like
A3P31_08745	SSF160964	MalF N-terminal region-like
A3P31_08745	SSF161098	MetI-like
A3P31_08750	SSF53850	Periplasmic binding protein-like II
A3P31_08755	SSF50331	MOP-like
A3P31_08755	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08760	SSF56784	HAD-like
A3P31_08765	SSF48208	Six-hairpin glycosidases
A3P31_08765	SSF74650	Galactose mutarotase-like
A3P31_08770	SSF51445	(Trans)glycosidases
A3P31_08770	SSF81296	E set domains
A3P31_08775	SSF51011	Glycosyl hydrolase domain
A3P31_08775	SSF51445	(Trans)glycosidases
A3P31_08780	SSF47413	lambda repressor-like DNA-binding domains
A3P31_08780	SSF53822	Periplasmic binding protein-like I
A3P31_08785	SSF53271	PRTase-like
A3P31_08790	SSF51161	Trimeric LpxA-like enzymes
A3P31_08790	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_08795	SSF46785	"Winged helix" DNA-binding domain
A3P31_08795	SSF53271	PRTase-like
A3P31_08805	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_08810	SSF110455	Toprim domain
A3P31_08815	SSF51556	Metallo-dependent hydrolases
A3P31_08820	SSF47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
A3P31_08820	SSF50249	Nucleic acid-binding proteins
A3P31_08820	SSF52374	Nucleotidylyl transferase
A3P31_08825	SSF81653	Calcium ATPase, transduction domain A
A3P31_08825	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_08835	SSF53927	Cytidine deaminase-like
A3P31_08840	SSF52374	Nucleotidylyl transferase
A3P31_08845	SSF143081	BB1717-like
A3P31_08860	SSF53067	Actin-like ATPase domain
A3P31_08865	SSF51445	(Trans)glycosidases
A3P31_08875	SSF52794	PTS system IIB component-like
A3P31_08885	SSF46973	Enzyme IIa from lactose specific PTS, IIa-lac
A3P31_08890	SSF46785	"Winged helix" DNA-binding domain
A3P31_08890	SSF64288	Chorismate lyase-like
A3P31_08895	SSF51445	(Trans)glycosidases
A3P31_08905	SSF46785	"Winged helix" DNA-binding domain
A3P31_08905	SSF64288	Chorismate lyase-like
A3P31_08920	SSF51445	(Trans)glycosidases
A3P31_08925	SSF49764	HSP20-like chaperones
A3P31_08935	SSF46557	GreA transcript cleavage protein, N-terminal domain
A3P31_08935	SSF54534	FKBP-like
A3P31_08945	SSF54001	Cysteine proteinases
A3P31_08950	SSF109604	HD-domain/PDEase-like
A3P31_08955	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08960	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_08965	SSF161098	MetI-like
A3P31_08970	SSF161098	MetI-like
A3P31_08975	SSF53098	Ribonuclease H-like
A3P31_08975	SSF88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors
A3P31_08980	SSF53850	Periplasmic binding protein-like II
A3P31_08995	SSF54001	Cysteine proteinases
A3P31_09005	SSF52374	Nucleotidylyl transferase
A3P31_09005	SSF55174	Alpha-L RNA-binding motif
A3P31_09010	SSF53649	Alkaline phosphatase-like
A3P31_09025	SSF74650	Galactose mutarotase-like
A3P31_09030	SSF103481	Multidrug resistance efflux transporter EmrE
A3P31_09045	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_09055	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)
A3P31_09080	SSF143100	TTHA1013/TTHA0281-like
A3P31_09085	SSF53254	Phosphoglycerate mutase-like
A3P31_09090	SSF55785	PYP-like sensor domain (PAS domain)
A3P31_09105	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_09105	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
A3P31_09110	SSF116726	TrkA C-terminal domain-like
A3P31_09110	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_09115	SSF53613	Ribokinase-like
A3P31_09120	SSF51445	(Trans)glycosidases
A3P31_09160	SSF46689	Homeodomain-like
A3P31_09160	SSF53098	Ribonuclease H-like
A3P31_09175	SSF53795	PEP carboxykinase-like
A3P31_09175	SSF68923	PEP carboxykinase N-terminal domain
A3P31_09185	SSF55486	Metalloproteases ("zincins"), catalytic domain
A3P31_09190	SSF52794	PTS system IIB component-like
A3P31_09190	SSF55804	Phoshotransferase/anion transport protein
A3P31_09195	SSF53613	Ribokinase-like
A3P31_09200	SSF46689	Homeodomain-like
A3P31_09200	SSF53697	SIS domain
A3P31_09205	SSF57997	Tropomyosin
A3P31_09210	SSF51569	Aldolase
A3P31_09215	SSF103473	MFS general substrate transporter
A3P31_09225	SSF117916	Fe-S cluster assembly (FSCA) domain-like
A3P31_09225	SSF140683	SP0561-like
A3P31_09230	SSF102114	Radical SAM enzymes
A3P31_09235	SSF51998	PFL-like glycyl radical enzymes
A3P31_09240	SSF56059	Glutathione synthetase ATP-binding domain-like
A3P31_09245	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_09245	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
A3P31_09250	SSF56300	Metallo-dependent phosphatases
A3P31_09260	SSF161098	MetI-like
A3P31_09265	SSF161098	MetI-like
A3P31_09270	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09275	SSF53850	Periplasmic binding protein-like II
A3P31_09280	SSF52402	Adenine nucleotide alpha hydrolases-like
A3P31_09285	SSF52799	(Phosphotyrosine protein) phosphatases II
A3P31_09290	SSF46785	"Winged helix" DNA-binding domain
A3P31_09290	SSF64288	Chorismate lyase-like
A3P31_09295	SSF55804	Phoshotransferase/anion transport protein
A3P31_09300	SSF52309	N-(deoxy)ribosyltransferase-like
A3P31_09315	SSF52266	SGNH hydrolase
A3P31_09320	SSF82185	Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain
A3P31_09335	SSF53062	PTS system fructose IIA component-like
A3P31_09350	SSF52728	PTS IIb component
A3P31_09355	SSF51338	Composite domain of metallo-dependent hydrolases
A3P31_09355	SSF51556	Metallo-dependent hydrolases
A3P31_09360	SSF53697	SIS domain
A3P31_09365	SSF46785	"Winged helix" DNA-binding domain
A3P31_09365	SSF64288	Chorismate lyase-like
A3P31_09370	SSF49265	Fibronectin type III
A3P31_09370	SSF49785	Galactose-binding domain-like
A3P31_09370	SSF51011	Glycosyl hydrolase domain
A3P31_09370	SSF51445	(Trans)glycosidases
A3P31_09370	SSF74650	Galactose mutarotase-like
A3P31_09375	SSF53474	alpha/beta-Hydrolases
A3P31_09400	SSF52440	PreATP-grasp domain
A3P31_09400	SSF56059	Glutathione synthetase ATP-binding domain-like
A3P31_09405	SSF55797	PR-1-like
A3P31_09415	SSF53067	Actin-like ATPase domain
A3P31_09445	SSF46689	Homeodomain-like
A3P31_09465	SSF53271	PRTase-like
A3P31_09475	SSF53474	alpha/beta-Hydrolases
A3P31_09480	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_09490	SSF53098	Ribonuclease H-like
A3P31_09490	SSF55658	L9 N-domain-like
A3P31_09495	SSF53474	alpha/beta-Hydrolases
A3P31_09505	SSF56024	Phospholipase D/nuclease
A3P31_09515	SSF52467	DHS-like NAD/FAD-binding domain
A3P31_09520	SSF46767	Methylated DNA-protein cysteine methyltransferase, C-terminal domain
A3P31_09520	SSF53155	Methylated DNA-protein cysteine methyltransferase domain
A3P31_09525	SSF103473	MFS general substrate transporter
A3P31_09535	SSF50486	FMT C-terminal domain-like
A3P31_09540	SSF161098	MetI-like
A3P31_09540	SSF53850	Periplasmic binding protein-like II
A3P31_09545	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09560	SSF109604	HD-domain/PDEase-like
A3P31_09570	SSF53448	Nucleotide-diphospho-sugar transferases
A3P31_09585	SSF89360	HesB-like domain
A3P31_09595	SSF140478	LemA-like
A3P31_09605	SSF46689	Homeodomain-like
A3P31_09605	SSF51215	Regulatory protein AraC
A3P31_09615	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09625	SSF75217	alpha/beta knot
A3P31_09630	SSF50156	PDZ domain-like
A3P31_09630	SSF50494	Trypsin-like serine proteases
A3P31_09635	SSF56281	Metallo-hydrolase/oxidoreductase
A3P31_09650	SSF103190	Sensory domain-like
A3P31_09650	SSF158472	HAMP domain-like
A3P31_09650	SSF47384	Homodimeric domain of signal transducing histidine kinase
A3P31_09650	SSF55785	PYP-like sensor domain (PAS domain)
A3P31_09650	SSF55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
A3P31_09655	SSF52172	CheY-like
A3P31_09675	SSF69593	Glycerol-3-phosphate (1)-acyltransferase
A3P31_09685	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)
A3P31_09690	SSF53474	alpha/beta-Hydrolases
A3P31_09695	SSF53335	S-adenosyl-L-methionine-dependent methyltransferases
A3P31_09705	SSF51905	FAD/NAD(P)-binding domain
A3P31_09705	SSF56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain
A3P31_09710	SSF46785	"Winged helix" DNA-binding domain
A3P31_09710	SSF53850	Periplasmic binding protein-like II
A3P31_09725	SSF51735	NAD(P)-binding Rossmann-fold domains
A3P31_09725	SSF52283	Formate/glycerate dehydrogenase catalytic domain-like
A3P31_09730	SSF52266	SGNH hydrolase
A3P31_09735	SSF51412	Inosine monophosphate dehydrogenase (IMPDH)
A3P31_09740	SSF51905	FAD/NAD(P)-binding domain
A3P31_09740	SSF55424	FAD/NAD-linked reductases, dimerisation (C-terminal) domain
A3P31_09755	SSF53474	alpha/beta-Hydrolases
A3P31_09760	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09760	SSF56024	Phospholipase D/nuclease
A3P31_09765	SSF56219	DNase I-like
A3P31_09775	SSF69047	Hypothetical protein YjbJ
A3P31_09790	SSF46689	Homeodomain-like
A3P31_09790	SSF53098	Ribonuclease H-like
A3P31_09800	SSF46689	Homeodomain-like
A3P31_09800	SSF53098	Ribonuclease H-like
A3P31_09810	SSF81340	Clc chloride channel
A3P31_09825	SSF56784	HAD-like
A3P31_09825	SSF81653	Calcium ATPase, transduction domain A
A3P31_09825	SSF81665	Calcium ATPase, transmembrane domain M
A3P31_09830	SSF46785	"Winged helix" DNA-binding domain
A3P31_09850	SSF50447	Translation proteins
A3P31_09850	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09850	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_09850	SSF54980	EF-G C-terminal domain-like
A3P31_09855	SSF47413	lambda repressor-like DNA-binding domains
A3P31_09860	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09860	SSF90123	ABC transporter transmembrane region
A3P31_09870	SSF82549	DAK1/DegV-like
A3P31_09875	SSF56784	HAD-like
A3P31_09895	SSF50447	Translation proteins
A3P31_09895	SSF52540	P-loop containing nucleoside triphosphate hydrolases
A3P31_09895	SSF54211	Ribosomal protein S5 domain 2-like
A3P31_09895	SSF54980	EF-G C-terminal domain-like
A3P31_09905	SSF51735	NAD(P)-binding Rossmann-fold domains