locus-tag	class	description
FEE41_00075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FEE41_00085	COG0531	amino acid
FEE41_00090	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FEE41_00100	COG1846	Transcriptional regulator
FEE41_00125	COG2723	6-phospho-beta-galactosidase activity
FEE41_00155	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEE41_00160	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEE41_00165	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEE41_00180	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FEE41_00215	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FEE41_00230	COG1192	Involved in chromosome partitioning
FEE41_00330	COG1011	Hydrolase
FEE41_00335	COG0110	maltose O-acetyltransferase activity
FEE41_00340	COG0589	response to stress
FEE41_00360	COG0656	L-ascorbic acid biosynthetic process
FEE41_00365	COG4221	oxidoreductase activity
FEE41_00390	COG0656	L-ascorbic acid biosynthetic process
FEE41_00400	COG4975	Glucose uptake
FEE41_00425	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_00430	COG1063	alcohol dehydrogenase
FEE41_00440	COG0583	DNA-binding transcription factor activity
FEE41_00465	COG0456	acetyltransferase
FEE41_00490	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FEE41_00515	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FEE41_00520	COG0789	Transcriptional regulator
FEE41_00535	COG4221	oxidoreductase activity
FEE41_00545	COG4152	abc transporter atp-binding protein
FEE41_00555	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FEE41_00570	COG0438	transferase activity, transferring glycosyl groups
FEE41_00580	COG0583	DNA-binding transcription factor activity
FEE41_00585	COG2855	membrane
FEE41_00590	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FEE41_00600	COG2814	Major facilitator Superfamily
FEE41_00610	COG2814	Major facilitator Superfamily
FEE41_00655	COG1136	(ABC) transporter
FEE41_00660	COG0577	efflux transmembrane transporter activity
FEE41_00675	COG0789	Transcriptional regulator
FEE41_00675	COG4978	Transcriptional regulator
FEE41_00680	COG1811	Na channel or pump
FEE41_00700	COG4990	cell redox homeostasis
FEE41_00715	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FEE41_00720	COG4720	Psort location CytoplasmicMembrane, score
FEE41_00765	COG0531	amino acid
FEE41_00770	COG0710	3-dehydroquinate dehydratase activity
FEE41_00790	COG0716	FMN binding
FEE41_00815	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FEE41_00820	COG0561	phosphatase activity
FEE41_00835	COG1216	Glycosyl transferase, family 2
FEE41_00840	COG2188	Transcriptional regulator
FEE41_00845	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_00850	COG1447	Phosphotransferase system cellobiose-specific component IIA
FEE41_00855	COG2723	6-phospho-beta-galactosidase activity
FEE41_00860	COG2723	6-phospho-beta-galactosidase activity
FEE41_00865	COG3048	D-serine ammonia-lyase activity
FEE41_00870	COG1131	(ABC) transporter
FEE41_00880	COG1309	transcriptional regulator
FEE41_00885	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FEE41_00890	COG1827	regulation of RNA biosynthetic process
FEE41_00920	COG1051	belongs to the nudix hydrolase family
FEE41_00925	COG0110	maltose O-acetyltransferase activity
FEE41_00935	COG0561	phosphatase activity
FEE41_00945	COG0366	Alpha amylase catalytic
FEE41_00965	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FEE41_00985	COG2246	polysaccharide biosynthetic process
FEE41_00995	COG0589	response to stress
FEE41_01005	COG1131	(ABC) transporter
FEE41_01010	COG1725	Transcriptional regulator
FEE41_01025	COG1136	(ABC) transporter
FEE41_01045	COG2365	Tyrosine phosphatase family
FEE41_01050	COG0095	Lipoate-protein ligase
FEE41_01055	COG3976	FMN-binding domain protein
FEE41_01055	COG1053	succinate dehydrogenase
FEE41_01055	COG0431	NADPH-dependent FMN reductase
FEE41_01060	COG0431	NADPH-dependent FMN reductase
FEE41_01060	COG1053	succinate dehydrogenase
FEE41_01060	COG3976	FMN-binding domain protein
FEE41_01070	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FEE41_01075	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FEE41_01080	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FEE41_01085	COG0047	phosphoribosylformylglycinamidine synthase activity
FEE41_01090	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FEE41_01100	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FEE41_01105	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FEE41_01110	COG0138	bifunctional purine biosynthesis protein purh
FEE41_01115	COG0151	Belongs to the GarS family
FEE41_01125	COG1215	transferase activity, transferring glycosyl groups
FEE41_01145	COG2252	PERMEase
FEE41_01150	COG2233	PERMEase
FEE41_01155	COG2508	Transcriptional regulator
FEE41_01160	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
FEE41_01165	COG0540	Belongs to the ATCase OTCase family
FEE41_01170	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FEE41_01175	COG0505	Belongs to the CarA family
FEE41_01180	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FEE41_01185	COG0167	dihydroorotate dehydrogenase activity
FEE41_01190	COG0284	orotidine-5'-phosphate decarboxylase activity
FEE41_01195	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FEE41_01205	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
FEE41_01210	COG1074	ATP-dependent DNA helicase activity
FEE41_01220	COG0702	epimerase
FEE41_01225	COG0583	DNA-binding transcription factor activity
FEE41_01240	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FEE41_01245	COG0436	Aminotransferase
FEE41_01250	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEE41_01260	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
FEE41_01270	COG0604	alcohol dehydrogenase
FEE41_01275	COG0789	Transcriptional regulator
FEE41_01280	COG2814	Major facilitator Superfamily
FEE41_01285	COG0025	NhaP-type Na H and K H
FEE41_01290	COG1780	Probably involved in ribonucleotide reductase function
FEE41_01295	COG1253	flavin adenine dinucleotide binding
FEE41_01325	COG1418	mRNA catabolic process
FEE41_01335	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FEE41_01340	COG2188	Transcriptional regulator
FEE41_01350	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
FEE41_01365	COG1396	sequence-specific DNA binding
FEE41_01370	COG4640	response to antibiotic
FEE41_01385	COG0564	pseudouridine synthase activity
FEE41_01390	COG0589	response to stress
FEE41_01395	COG1705	Flagellar rod assembly protein muramidase FlgJ
FEE41_01400	COG0095	Lipoate-protein ligase
FEE41_01430	COG0626	cystathionine gamma-synthase activity
FEE41_01435	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FEE41_01440	COG1073	alpha beta
FEE41_01450	COG0028	Belongs to the TPP enzyme family
FEE41_01490	COG1725	Transcriptional regulator
FEE41_01495	COG1131	(ABC) transporter
FEE41_01505	COG1335	isochorismatase
FEE41_01510	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
FEE41_01515	COG0025	NhaP-type Na H and K H
FEE41_01520	COG0673	inositol 2-dehydrogenase activity
FEE41_01525	COG0673	inositol 2-dehydrogenase activity
FEE41_01535	COG1609	Transcriptional regulator
FEE41_01545	COG0328	RNA-DNA hybrid ribonuclease activity
FEE41_01555	COG0778	Nitroreductase
FEE41_01560	COG2326	polyphosphate kinase activity
FEE41_01565	COG4932	domain protein
FEE41_01575	COG0492	ferredoxin-NADP+ reductase activity
FEE41_01585	COG0584	glycerophosphoryl diester phosphodiesterase
FEE41_01590	COG1368	sulfuric ester hydrolase activity
FEE41_01610	COG3548	integral membrane protein
FEE41_01625	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FEE41_01635	COG0300	oxidoreductase activity
FEE41_01640	COG0789	Transcriptional regulator
FEE41_01660	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
FEE41_01665	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FEE41_01670	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FEE41_01675	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FEE41_01680	COG0131	Imidazoleglycerol-phosphate dehydratase
FEE41_01685	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FEE41_01690	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FEE41_01695	COG0107	imidazoleglycerol-phosphate synthase activity
FEE41_01700	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FEE41_01705	COG0140	phosphoribosyl-ATP diphosphatase activity
FEE41_01710	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FEE41_01720	COG0861	Integral membrane protein TerC family
FEE41_01725	COG2084	Dehydrogenase
FEE41_01730	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_01740	COG4120	Belongs to the binding-protein-dependent transport system permease family
FEE41_01755	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
FEE41_01760	COG2873	o-acetylhomoserine
FEE41_01770	COG1307	EDD domain protein, DegV family
FEE41_01775	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FEE41_01780	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_01780	COG2190	(PTS) system
FEE41_01780	COG1263	PTS System
FEE41_01810	COG0488	(ABC) transporter
FEE41_01815	COG3706	GGDEF domain
FEE41_01830	COG1522	sequence-specific DNA binding
FEE41_01835	COG0791	NLP P60 protein
FEE41_01855	COG0477	Major facilitator Superfamily
FEE41_01880	COG3830	Belongs to the UPF0237 family
FEE41_01885	COG2848	UPF0210 protein
FEE41_01890	COG0745	RESPONSE REGULATOR receiver
FEE41_01895	COG5002	protein histidine kinase activity
FEE41_01895	COG3850	Histidine kinase
FEE41_01900	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
FEE41_01905	COG4975	Glucose uptake
FEE41_01910	COG0166	Belongs to the GPI family
FEE41_01920	COG1136	(ABC) transporter
FEE41_01920	COG0577	efflux transmembrane transporter activity
FEE41_01930	COG1132	(ABC) transporter
FEE41_01975	COG4932	domain protein
FEE41_01975	COG4886	Leucine-rich repeat (LRR) protein
FEE41_02000	COG4974	Belongs to the 'phage' integrase family
FEE41_02065	COG4695	Portal protein
FEE41_02120	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FEE41_02155	COG1396	sequence-specific DNA binding
FEE41_02440	COG0726	polysaccharide deacetylase
FEE41_02455	COG1132	(ABC) transporter
FEE41_02470	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FEE41_02480	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEE41_02485	COG1482	cell wall glycoprotein biosynthetic process
FEE41_02490	COG3442	glutamine amidotransferase
FEE41_02495	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FEE41_02500	COG1435	thymidine kinase activity
FEE41_02505	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FEE41_02510	COG2890	protein-(glutamine-N5) methyltransferase activity
FEE41_02515	COG0009	L-threonylcarbamoyladenylate synthase
FEE41_02520	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FEE41_02525	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FEE41_02535	COG2233	PERMEase
FEE41_02540	COG0356	it plays a direct role in the translocation of protons across the membrane
FEE41_02545	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FEE41_02550	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
FEE41_02555	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FEE41_02560	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FEE41_02565	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FEE41_02570	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
FEE41_02575	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FEE41_02580	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FEE41_02590	COG1077	Cell shape determining protein MreB Mrl
FEE41_02595	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FEE41_02605	COG0772	Belongs to the SEDS family
FEE41_02610	COG0509	glycine decarboxylation via glycine cleavage system
FEE41_02615	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FEE41_02620	COG2011	ABC-type metal ion transport system permease component
FEE41_02625	COG1464	Belongs to the NlpA lipoprotein family
FEE41_02645	COG1181	Belongs to the D-alanine--D-alanine ligase family
FEE41_02665	COG0589	response to stress
FEE41_02680	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FEE41_02685	COG0189	ligase activity
FEE41_02685	COG2918	glutathione biosynthetic process
FEE41_02690	COG1609	Transcriptional regulator
FEE41_02695	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_02700	COG3715	PTS system
FEE41_02705	COG3716	PTS system mannose fructose sorbose family IID component
FEE41_02715	COG0366	Alpha amylase catalytic
FEE41_02720	COG0640	Transcriptional regulator
FEE41_02735	COG4493	Belongs to the UPF0637 family
FEE41_02740	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FEE41_02745	COG1956	GAF domain-containing protein
FEE41_02750	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
FEE41_02760	COG1104	cysteine desulfurase activity
FEE41_02765	COG0301	tRNA thio-modification
FEE41_02770	COG2918	glutathione biosynthetic process
FEE41_02770	COG1181	Belongs to the D-alanine--D-alanine ligase family
FEE41_02780	COG0525	valine-tRNA ligase activity
FEE41_02785	COG0285	dihydrofolate synthase activity
FEE41_02790	COG2003	Belongs to the UPF0758 family
FEE41_02795	COG1077	Cell shape determining protein MreB Mrl
FEE41_02800	COG1792	Involved in formation and maintenance of cell shape
FEE41_02810	COG0850	regulation of cytokinetic process
FEE41_02815	COG2894	cell division
FEE41_02820	COG0765	amino acid transport
FEE41_02825	COG1126	abc transporter atp-binding protein
FEE41_02830	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEE41_02840	COG0527	aspartate kinase activity
FEE41_02845	COG0612	Peptidase, M16
FEE41_02850	COG0612	Peptidase, M16
FEE41_02855	COG1426	Protein conserved in bacteria
FEE41_02860	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FEE41_02865	COG1546	Belongs to the CinA family
FEE41_02865	COG1058	Belongs to the CinA family
FEE41_02870	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FEE41_02875	COG1418	mRNA catabolic process
FEE41_02880	COG1692	metallophosphoesterase
FEE41_02885	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FEE41_02890	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FEE41_02920	COG0632	four-way junction helicase activity
FEE41_02925	COG2255	four-way junction helicase activity
FEE41_02930	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FEE41_02935	COG0343	queuine tRNA-ribosyltransferase activity
FEE41_02940	COG1862	Preprotein translocase
FEE41_02945	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FEE41_02950	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FEE41_02955	COG0513	Belongs to the DEAD box helicase family
FEE41_02960	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FEE41_02965	COG4472	Bacterial protein of unknown function (DUF965)
FEE41_02970	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FEE41_02975	COG3906	Belongs to the UPF0473 family
FEE41_02985	COG1193	negative regulation of DNA recombination
FEE41_02990	COG3118	belongs to the thioredoxin family
FEE41_02995	COG1719	4-vinyl reductase, 4VR
FEE41_03000	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FEE41_03005	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FEE41_03015	COG0517	IMP dehydrogenase activity
FEE41_03020	COG2171	N-acyltransferase activity
FEE41_03025	COG1473	amidohydrolase
FEE41_03030	COG0668	transmembrane transport
FEE41_03045	COG0789	Transcriptional regulator
FEE41_03050	COG0006	proline dipeptidase activity
FEE41_03055	COG1609	Transcriptional regulator
FEE41_03070	COG0217	transcriptional regulatory protein
FEE41_03080	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FEE41_03110	COG0827	DNA restriction-modification system
FEE41_03115	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FEE41_03120	COG1113	amino acid transport
FEE41_03135	COG0737	Belongs to the 5'-nucleotidase family
FEE41_03140	COG4470	Protein conserved in bacteria
FEE41_03145	COG0647	UMP catabolic process
FEE41_03155	COG0586	Pfam SNARE associated Golgi protein
FEE41_03165	COG1098	S1 RNA binding domain
FEE41_03305	COG1234	tRNA 3'-trailer cleavage
FEE41_03310	COG1393	Belongs to the ArsC family
FEE41_03315	COG4862	establishment of competence for transformation
FEE41_03325	COG1164	Oligoendopeptidase f
FEE41_03335	COG2357	RelA SpoT domain protein
FEE41_03340	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
FEE41_03345	COG0564	pseudouridine synthase activity
FEE41_03350	COG3142	Participates in the control of copper homeostasis
FEE41_03355	COG2706	6-phosphogluconolactonase activity
FEE41_03365	COG0628	permease
FEE41_03370	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FEE41_03380	COG1114	Component of the transport system for branched-chain amino acids
FEE41_03390	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
FEE41_03395	COG1674	ftsk spoiiie
FEE41_03415	COG2001	Belongs to the MraZ family
FEE41_03420	COG0275	rRNA processing
FEE41_03435	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FEE41_03440	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FEE41_03445	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FEE41_03450	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FEE41_03465	COG1799	cell septum assembly
FEE41_03470	COG0762	integral membrane protein
FEE41_03480	COG3599	regulation of cell shape
FEE41_03485	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FEE41_03490	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FEE41_03495	COG0494	nUDIX hydrolase
FEE41_03505	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FEE41_03510	COG1104	cysteine desulfurase activity
FEE41_03520	COG0482	sulfurtransferase activity
FEE41_03525	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FEE41_03530	COG0569	domain protein
FEE41_03560	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
FEE41_03565	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FEE41_03575	COG3584	3D domain protein
FEE41_03575	COG1388	LysM domain
FEE41_03590	COG1597	lipid kinase activity
FEE41_03595	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
FEE41_03610	COG0242	peptide deformylase activity
FEE41_03635	COG0039	L-malate dehydrogenase activity
FEE41_03640	COG4476	Belongs to the UPF0223 family
FEE41_03645	COG0483	inositol monophosphate 1-phosphatase activity
FEE41_03685	COG0772	Belongs to the SEDS family
FEE41_03690	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
FEE41_03695	COG4471	UPF0298 protein
FEE41_03700	COG0742	ribosomal rna small subunit methyltransferase
FEE41_03705	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FEE41_03710	COG3480	Lon protease (S16) C-terminal proteolytic domain
FEE41_03715	COG1596	polysaccharide export
FEE41_03715	COG1555	photosystem II stabilization
FEE41_03720	COG2131	deaminase
FEE41_03725	COG2333	competence protein COMEC
FEE41_03725	COG0658	competence protein
FEE41_03730	COG1466	dna polymerase III delta subunit
FEE41_03735	COG0268	Binds directly to 16S ribosomal RNA
FEE41_03740	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FEE41_03765	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FEE41_03770	COG0544	peptidyl-prolyl cis-trans isomerase activity
FEE41_03775	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FEE41_03780	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FEE41_03800	COG0765	amino acid transport
FEE41_03805	COG1126	abc transporter atp-binding protein
FEE41_03810	COG0322	excinuclease ABC activity
FEE41_03830	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FEE41_03835	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FEE41_03840	COG0297	glycogen (starch) synthase activity
FEE41_03865	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FEE41_03870	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_03870	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_03870	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_03875	COG1105	Belongs to the carbohydrate kinase PfkB family
FEE41_03880	COG1349	DNA-binding transcription factor activity
FEE41_03885	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FEE41_03895	COG1234	tRNA 3'-trailer cleavage
FEE41_03900	COG0300	oxidoreductase activity
FEE41_03905	COG5416	Lipopolysaccharide assembly protein A domain
FEE41_03910	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
FEE41_03910	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
FEE41_03915	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FEE41_03930	COG0393	Putative heavy-metal-binding
FEE41_03995	COG0463	Glycosyl transferase, family 2
FEE41_04010	COG3425	synthase
FEE41_04025	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FEE41_04030	COG4224	UPF0291 protein
FEE41_04035	COG3763	UPF0154 protein
FEE41_04040	COG0204	Acyl-transferase
FEE41_04045	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
FEE41_04050	COG2827	Endonuclease containing a URI domain
FEE41_04055	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FEE41_04065	COG0052	Belongs to the universal ribosomal protein uS2 family
FEE41_04070	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FEE41_04075	COG0528	UMP kinase activity
FEE41_04080	COG0233	cytoplasmic translational termination
FEE41_04085	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FEE41_04090	COG4589	Belongs to the CDS family
FEE41_04095	COG0750	zinc metalloprotease
FEE41_04100	COG0442	prolyl-tRNA aminoacylation
FEE41_04105	COG2176	DNA-directed DNA polymerase activity
FEE41_04110	COG0779	Required for maturation of 30S ribosomal subunits
FEE41_04115	COG0195	Participates in both transcription termination and antitermination
FEE41_04120	COG2740	Nucleic-acid-binding protein implicated in transcription termination
FEE41_04130	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FEE41_04135	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FEE41_04140	COG0738	Major facilitator superfamily
FEE41_04145	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FEE41_04155	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FEE41_04160	COG0287	Prephenate dehydrogenase
FEE41_04165	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FEE41_04170	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FEE41_04175	COG0196	riboflavin kinase activity
FEE41_04180	COG3527	Alpha-acetolactate decarboxylase
FEE41_04185	COG1420	regulation of RNA biosynthetic process
FEE41_04190	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FEE41_04195	COG0443	Heat shock 70 kDa protein
FEE41_04200	COG0484	heat shock protein binding
FEE41_04205	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEE41_04215	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FEE41_04220	COG1696	Membrane protein involved in D-alanine export
FEE41_04225	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEE41_04230	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
FEE41_04235	COG0481	GTPase activity
FEE41_04250	COG2094	Belongs to the DNA glycosylase MPG family
FEE41_04255	COG2264	protein methyltransferase activity
FEE41_04260	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FEE41_04270	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FEE41_04275	COG1490	D-aminoacyl-tRNA deacylase activity
FEE41_04280	COG0546	phosphoglycolate phosphatase activity
FEE41_04285	COG3001	Fructosamine kinase
FEE41_04290	COG0860	N-Acetylmuramoyl-L-alanine amidase
FEE41_04290	COG3103	Sh3 type 3 domain protein
FEE41_04290	COG4991	sh3 domain protein
FEE41_04295	COG0124	histidyl-tRNA synthetase
FEE41_04300	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FEE41_04310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
FEE41_04320	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
FEE41_04330	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
FEE41_04335	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FEE41_04340	COG1610	YqeY-like protein
FEE41_04345	COG1702	phosphate starvation-inducible protein PhoH
FEE41_04350	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FEE41_04355	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FEE41_04360	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FEE41_04365	COG1381	Involved in DNA repair and RecF pathway recombination
FEE41_04370	COG0752	glycyl-tRNA synthetase alpha subunit
FEE41_04375	COG0751	glycine-tRNA ligase activity
FEE41_04380	COG0358	DNA primase activity
FEE41_04385	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
FEE41_04395	COG1725	Transcriptional regulator
FEE41_04400	COG1131	(ABC) transporter
FEE41_04420	COG1131	(ABC) transporter
FEE41_04450	COG0519	Catalyzes the synthesis of GMP from XMP
FEE41_04460	COG1131	(ABC) transporter
FEE41_04470	COG4585	Histidine kinase
FEE41_04475	COG2197	response regulator
FEE41_04480	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_04490	COG0604	alcohol dehydrogenase
FEE41_04495	COG0583	DNA-binding transcription factor activity
FEE41_04525	COG0546	phosphoglycolate phosphatase activity
FEE41_04570	COG1393	Belongs to the ArsC family
FEE41_04580	COG1349	DNA-binding transcription factor activity
FEE41_04585	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_04595	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FEE41_04610	COG0477	Major facilitator Superfamily
FEE41_04615	COG0148	phosphopyruvate hydratase activity
FEE41_04620	COG2217	Heavy metal translocating P-type atpase
FEE41_04640	COG1846	Transcriptional regulator
FEE41_04650	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FEE41_04650	COG0574	Belongs to the PEP-utilizing enzyme family
FEE41_04675	COG2384	SAM-dependent methyltransferase
FEE41_04680	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FEE41_04690	COG0542	response to heat
FEE41_04700	COG0587	DNA-directed DNA polymerase activity
FEE41_04705	COG0205	6-phosphofructokinase activity
FEE41_04720	COG2996	Protein conserved in bacteria
FEE41_04725	COG4974	Belongs to the 'phage' integrase family
FEE41_04735	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FEE41_04740	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FEE41_04745	COG1187	pseudouridine synthase activity
FEE41_04750	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FEE41_04760	COG0514	ATP-dependent DNA helicase (RecQ)
FEE41_04770	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FEE41_04775	COG0539	negative regulation of cytoplasmic translation
FEE41_04780	COG1160	GTP binding
FEE41_04795	COG0457	Tetratricopeptide repeat
FEE41_04800	COG0561	phosphatase activity
FEE41_04805	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
FEE41_04810	COG0617	tRNA 3'-terminal CCA addition
FEE41_04820	COG0488	(ABC) transporter
FEE41_04825	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
FEE41_04830	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
FEE41_04835	COG1307	EDD domain protein, DegV family
FEE41_04840	COG2755	lipolytic protein G-D-S-L family
FEE41_04845	COG4698	Protein conserved in bacteria
FEE41_04850	COG4479	Belongs to the UPF0346 family
FEE41_04855	COG0793	Belongs to the peptidase S41A family
FEE41_04855	COG3409	Peptidoglycan-binding domain 1 protein
FEE41_04860	COG2814	Major facilitator Superfamily
FEE41_04880	COG0583	DNA-binding transcription factor activity
FEE41_04885	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FEE41_04895	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FEE41_04900	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FEE41_04905	COG0758	DNA mediated transformation
FEE41_04910	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FEE41_04915	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
FEE41_04920	COG4974	Belongs to the 'phage' integrase family
FEE41_04925	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FEE41_04930	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FEE41_04940	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FEE41_04945	COG0187	DNA topoisomerase II activity
FEE41_04955	COG0583	DNA-binding transcription factor activity
FEE41_04960	COG1227	inorganic diphosphatase activity
FEE41_04965	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FEE41_05000	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FEE41_05005	COG1846	Transcriptional regulator
FEE41_05030	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FEE41_05040	COG1620	l-lactate permease
FEE41_05055	COG1113	amino acid transport
FEE41_05115	COG1307	EDD domain protein, DegV family
FEE41_05125	COG1293	RNA-binding protein homologous to eukaryotic snRNP
FEE41_05160	COG5646	InterPro IPR014922
FEE41_05175	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FEE41_05180	COG0505	Belongs to the CarA family
FEE41_05185	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
FEE41_05190	COG0564	pseudouridine synthase activity
FEE41_05195	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FEE41_05200	COG2759	Belongs to the formate--tetrahydrofolate ligase family
FEE41_05215	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FEE41_05245	COG1619	proteins homologs of microcin C7 resistance protein MccF
FEE41_05265	COG1216	Glycosyl transferase, family 2
FEE41_05275	COG1073	alpha beta
FEE41_05280	COG0477	Major facilitator Superfamily
FEE41_05290	COG0116	Belongs to the methyltransferase superfamily
FEE41_05300	COG3599	regulation of cell shape
FEE41_05305	COG4474	Belongs to the UPF0398 family
FEE41_05310	COG3331	DNA recombination
FEE41_05325	COG1840	ABC-type Fe3 transport system, periplasmic component
FEE41_05330	COG1177	transmembrane transport
FEE41_05340	COG1464	Belongs to the NlpA lipoprotein family
FEE41_05345	COG2011	ABC-type metal ion transport system permease component
FEE41_05350	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FEE41_05365	COG0017	Asparaginyl-tRNA synthetase
FEE41_05380	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FEE41_05380	COG1199	ATP-dependent helicase activity
FEE41_05405	COG1304	FMN binding
FEE41_05410	COG2017	converts alpha-aldose to the beta-anomer
FEE41_05430	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
FEE41_05430	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FEE41_05435	COG0561	phosphatase activity
FEE41_05440	COG0531	amino acid
FEE41_05480	COG1942	4-Oxalocrotonate Tautomerase
FEE41_05495	COG3237	CsbD-like
FEE41_05500	COG2261	transglycosylase associated protein
FEE41_05515	COG1597	lipid kinase activity
FEE41_05520	COG3152	Membrane
FEE41_05530	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
FEE41_05545	COG3397	chitin binding
FEE41_05550	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FEE41_05600	COG3153	acetyltransferase
FEE41_05605	COG3397	chitin binding
FEE41_05630	COG1388	LysM domain
FEE41_05630	COG3942	CHAP domain
FEE41_05730	COG1783	phage Terminase large subunit
FEE41_05830	COG1396	sequence-specific DNA binding
FEE41_05870	COG0582	viral genome integration into host DNA
FEE41_05880	COG0477	Major facilitator Superfamily
FEE41_05890	COG1162	GTPase activity
FEE41_05895	COG1607	acyl-coa hydrolase
FEE41_05900	COG0583	DNA-binding transcription factor activity
FEE41_05905	COG1811	Na channel or pump
FEE41_05915	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FEE41_05930	COG0439	Biotin carboxylase
FEE41_05945	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FEE41_05950	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_05955	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FEE41_05960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEE41_05965	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FEE41_05970	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FEE41_05980	COG0300	oxidoreductase activity
FEE41_05990	COG1063	alcohol dehydrogenase
FEE41_05995	COG1473	amidohydrolase
FEE41_06005	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FEE41_06020	COG0159	tryptophan synthase activity
FEE41_06025	COG0133	tryptophan synthase activity
FEE41_06030	COG0135	phosphoribosylanthranilate isomerase activity
FEE41_06035	COG0134	indole-3-glycerol-phosphate synthase activity
FEE41_06040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FEE41_06045	COG0512	Glutamine amidotransferase of anthranilate synthase
FEE41_06045	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FEE41_06080	COG0335	large ribosomal subunit rRNA binding
FEE41_06085	COG0336	Belongs to the RNA methyltransferase TrmD family
FEE41_06090	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
FEE41_06095	COG1837	Belongs to the UPF0109 family
FEE41_06100	COG0228	four-way junction DNA binding
FEE41_06105	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FEE41_06110	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
FEE41_06115	COG0552	protein localization to endoplasmic reticulum
FEE41_06120	COG1196	nuclear chromosome segregation
FEE41_06125	COG0571	ribonuclease III activity
FEE41_06130	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEE41_06135	COG0416	fatty acid biosynthetic process
FEE41_06140	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FEE41_06145	COG1461	Dihydroxyacetone kinase
FEE41_06150	COG1302	Protein conserved in bacteria
FEE41_06155	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FEE41_06165	COG1564	THIamine pyrophosphokinase
FEE41_06170	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FEE41_06175	COG1162	GTPase activity
FEE41_06180	COG0515	serine threonine protein kinase
FEE41_06180	COG2815	serine threonine protein kinase
FEE41_06185	COG0631	protein serine/threonine phosphatase activity
FEE41_06190	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FEE41_06190	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FEE41_06195	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FEE41_06200	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FEE41_06205	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FEE41_06210	COG1758	RNA polymerase activity
FEE41_06215	COG0194	GDP metabolic process
FEE41_06230	COG1732	Glycine betaine
FEE41_06245	COG0497	DNA recombination
FEE41_06250	COG1438	arginine binding
FEE41_06255	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
FEE41_06260	COG0142	geranyltranstransferase activity
FEE41_06265	COG1722	exodeoxyribonuclease VII activity
FEE41_06270	COG1570	exodeoxyribonuclease VII activity
FEE41_06275	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FEE41_06280	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FEE41_06285	COG1302	Protein conserved in bacteria
FEE41_06290	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FEE41_06295	COG0006	proline dipeptidase activity
FEE41_06300	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FEE41_06310	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FEE41_06360	COG0789	Transcriptional regulator
FEE41_06365	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FEE41_06370	COG0584	glycerophosphoryl diester phosphodiesterase
FEE41_06390	COG1940	carbohydrate kinase activity
FEE41_06400	COG0457	Tetratricopeptide repeat
FEE41_06400	COG0705	Rhomboid family
FEE41_06405	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FEE41_06410	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FEE41_06415	COG0768	penicillin binding
FEE41_06425	COG4841	protein insertion into membrane
FEE41_06445	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FEE41_06450	COG0572	uridine kinase
FEE41_06455	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FEE41_06460	COG0072	phenylalanine-tRNA ligase activity
FEE41_06460	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEE41_06465	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FEE41_06470	COG1733	regulation of RNA biosynthetic process
FEE41_06480	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FEE41_06485	COG1254	Belongs to the acylphosphatase family
FEE41_06490	COG0706	membrane insertase activity
FEE41_06505	COG0419	ATPase involved in DNA repair
FEE41_06515	COG5002	protein histidine kinase activity
FEE41_06520	COG0745	RESPONSE REGULATOR receiver
FEE41_06525	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FEE41_06530	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
FEE41_06545	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FEE41_06555	COG1323	Belongs to the UPF0348 family
FEE41_06560	COG2226	methyltransferase
FEE41_06565	COG0799	negative regulation of ribosome biogenesis
FEE41_06570	COG1713	HD superfamily hydrolase involved in NAD metabolism
FEE41_06575	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FEE41_06580	COG1534	Rna-binding protein
FEE41_06585	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
FEE41_06600	COG1215	transferase activity, transferring glycosyl groups
FEE41_06610	COG1733	regulation of RNA biosynthetic process
FEE41_06615	COG0604	alcohol dehydrogenase
FEE41_06620	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FEE41_06630	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FEE41_06635	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FEE41_06640	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FEE41_06645	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FEE41_06650	COG1484	DNA-dependent DNA replication
FEE41_06655	COG3611	Membrane attachment protein
FEE41_06660	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FEE41_06665	COG0237	dephospho-CoA kinase activity
FEE41_06670	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FEE41_06675	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FEE41_06675	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
FEE41_06690	COG2151	metal-sulfur cluster biosynthetic enzyme
FEE41_06695	COG0719	Fe-S assembly protein
FEE41_06705	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
FEE41_06710	COG0719	Fe-S assembly protein
FEE41_06735	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FEE41_06740	COG1674	ftsk spoiiie
FEE41_06745	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEE41_06755	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FEE41_06760	COG0510	thiamine kinase activity
FEE41_06765	COG4473	ABC transporter
FEE41_06770	COG1131	(ABC) transporter
FEE41_06775	COG0537	adenosine 5'-monophosphoramidase activity
FEE41_06785	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FEE41_06815	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_06825	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEE41_06840	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FEE41_06845	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FEE41_06845	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
FEE41_06850	COG0307	riboflavin synthase, alpha
FEE41_06855	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FEE41_06855	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FEE41_06875	COG0463	Glycosyl transferase, family 2
FEE41_06895	COG1053	succinate dehydrogenase
FEE41_06895	COG3976	FMN-binding domain protein
FEE41_06895	COG0431	NADPH-dependent FMN reductase
FEE41_06905	COG0583	DNA-binding transcription factor activity
FEE41_06920	COG3481	metal-dependent phosphohydrolase, HD sub domain
FEE41_06925	COG4717	serine-type aminopeptidase activity
FEE41_06930	COG0420	3'-5' exonuclease activity
FEE41_06935	COG3679	Belongs to the UPF0342 family
FEE41_06940	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FEE41_06950	COG1438	arginine binding
FEE41_06955	COG0436	Aminotransferase
FEE41_06965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEE41_06970	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FEE41_06975	COG1376	ErfK ybiS ycfS ynhG family protein
FEE41_06985	COG2723	6-phospho-beta-galactosidase activity
FEE41_06990	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_06995	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_07000	COG1447	Phosphotransferase system cellobiose-specific component IIA
FEE41_07020	COG1136	(ABC) transporter
FEE41_07020	COG0577	efflux transmembrane transporter activity
FEE41_07030	COG0018	arginyl-trna synthetase
FEE41_07035	COG2153	protein acetylation
FEE41_07055	COG0534	Mate efflux family protein
FEE41_07060	COG3273	potassium ion transport
FEE41_07060	COG0471	metal ion transport
FEE41_07070	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FEE41_07075	COG0529	Catalyzes the synthesis of activated sulfate
FEE41_07080	COG2046	Belongs to the sulfate adenylyltransferase family
FEE41_07090	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FEE41_07095	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FEE41_07095	COG0646	methionine synthase
FEE41_07135	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FEE41_07150	COG1846	Transcriptional regulator
FEE41_07170	COG3279	Response regulator of the LytR AlgR family
FEE41_07190	COG0561	phosphatase activity
FEE41_07195	COG0697	spore germination
FEE41_07205	COG0789	Transcriptional regulator
FEE41_07210	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FEE41_07240	COG1511	domain protein
FEE41_07240	COG1511	domain protein
FEE41_07245	COG1970	mechanosensitive ion channel activity
FEE41_07250	COG1428	Deoxynucleoside kinase
FEE41_07255	COG0584	glycerophosphoryl diester phosphodiesterase
FEE41_07265	COG0395	ABC-type sugar transport system, permease component
FEE41_07275	COG3842	ATPase activity
FEE41_07285	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FEE41_07290	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FEE41_07295	COG1187	pseudouridine synthase activity
FEE41_07300	COG2244	polysaccharide biosynthetic process
FEE41_07305	COG0495	leucyl-tRNA aminoacylation
FEE41_07315	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
FEE41_07330	COG0438	transferase activity, transferring glycosyl groups
FEE41_07345	COG0477	Major facilitator Superfamily
FEE41_07350	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FEE41_07360	COG0438	transferase activity, transferring glycosyl groups
FEE41_07365	COG2040	homocysteine
FEE41_07370	COG0833	amino acid
FEE41_07390	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FEE41_07410	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FEE41_07490	COG1368	sulfuric ester hydrolase activity
FEE41_07495	COG4703	Protein of unknown function (DUF1797)
FEE41_07500	COG0436	Aminotransferase
FEE41_07505	COG1686	Belongs to the peptidase S11 family
FEE41_07515	COG0438	transferase activity, transferring glycosyl groups
FEE41_07520	COG0438	transferase activity, transferring glycosyl groups
FEE41_07540	COG0542	response to heat
FEE41_07545	COG0582	viral genome integration into host DNA
FEE41_07555	COG4608	Belongs to the ABC transporter superfamily
FEE41_07560	COG0444	Belongs to the ABC transporter superfamily
FEE41_07565	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FEE41_07570	COG0601	transmembrane transport
FEE41_07575	COG4166	transmembrane transport
FEE41_07605	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FEE41_07610	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FEE41_07615	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
FEE41_07620	COG1070	Carbohydrate kinase
FEE41_07625	COG2610	gluconate transmembrane transporter activity
FEE41_07630	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FEE41_07635	COG0628	permease
FEE41_07645	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEE41_07665	COG3557	Belongs to the UPF0374 family
FEE41_07670	COG2137	regulation of response to DNA damage stimulus
FEE41_07705	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FEE41_07725	COG1609	Transcriptional regulator
FEE41_07725	COG2207	Transcriptional regulator
FEE41_07760	COG0562	UDP-galactopyranose mutase
FEE41_07875	COG4974	Belongs to the 'phage' integrase family
FEE41_07915	COG5039	Polysaccharide pyruvyl transferase
FEE41_07920	COG1215	transferase activity, transferring glycosyl groups
FEE41_07940	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
FEE41_07950	COG4464	protein tyrosine phosphatase activity
FEE41_07955	COG0489	protein tyrosine kinase activity
FEE41_07965	COG0582	viral genome integration into host DNA
FEE41_07970	COG1088	dTDP-glucose 4,6-dehydratase activity
FEE41_07990	COG0438	transferase activity, transferring glycosyl groups
FEE41_08000	COG1216	Glycosyl transferase, family 2
FEE41_08000	COG1442	glycosyl transferase family 8
FEE41_08025	COG0562	UDP-galactopyranose mutase
FEE41_08030	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_08040	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FEE41_08050	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FEE41_08075	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_08350	COG0513	Belongs to the DEAD box helicase family
FEE41_08355	COG0673	inositol 2-dehydrogenase activity
FEE41_08360	COG1278	Cold shock
FEE41_08375	COG1737	Transcriptional regulator
FEE41_08385	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_08400	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FEE41_08405	COG1597	lipid kinase activity
FEE41_08410	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FEE41_08415	COG0154	amidase activity
FEE41_08420	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FEE41_08425	COG4851	CamS sex pheromone cAM373 precursor
FEE41_08430	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FEE41_08440	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FEE41_08445	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
FEE41_08450	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FEE41_08455	COG1705	Flagellar rod assembly protein muramidase FlgJ
FEE41_08470	COG0142	geranyltranstransferase activity
FEE41_08485	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FEE41_08490	COG4988	ABC transporter
FEE41_08495	COG1294	oxidase, subunit
FEE41_08500	COG1271	oxidase subunit
FEE41_08515	COG4684	Psort location CytoplasmicMembrane, score
FEE41_08520	COG0531	amino acid
FEE41_08530	COG0281	malic enzyme
FEE41_08535	COG0583	DNA-binding transcription factor activity
FEE41_08540	COG0583	DNA-binding transcription factor activity
FEE41_08550	COG1053	succinate dehydrogenase
FEE41_08555	COG0114	fumarate hydratase activity
FEE41_08590	COG3052	prosthetic group binding
FEE41_08610	COG0471	metal ion transport
FEE41_08615	COG0039	L-malate dehydrogenase activity
FEE41_08625	COG0803	Belongs to the bacterial solute-binding protein 9 family
FEE41_08630	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FEE41_08635	COG1121	(ABC) transporter
FEE41_08640	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
FEE41_08655	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
FEE41_08660	COG2151	metal-sulfur cluster biosynthetic enzyme
FEE41_08665	COG0471	metal ion transport
FEE41_08670	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FEE41_08675	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
FEE41_08680	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FEE41_08685	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FEE41_08705	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FEE41_08710	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FEE41_08715	COG0101	tRNA pseudouridine synthase activity
FEE41_08725	COG1122	ATPase activity
FEE41_08730	COG1122	ATPase activity
FEE41_08740	COG4939	FMN-binding domain protein
FEE41_08765	COG0203	ribosomal protein L17
FEE41_08770	COG0202	RNA polymerase activity
FEE41_08775	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FEE41_08780	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FEE41_08785	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FEE41_08790	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FEE41_08795	COG0563	adenylate kinase activity
FEE41_08805	COG0200	Binds to the 23S rRNA
FEE41_08810	COG1841	ribosomal large subunit assembly
FEE41_08815	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FEE41_08820	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FEE41_08825	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FEE41_08830	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FEE41_08835	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FEE41_08840	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FEE41_08845	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FEE41_08850	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FEE41_08855	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FEE41_08860	COG0255	Belongs to the universal ribosomal protein uL29 family
FEE41_08865	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FEE41_08870	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FEE41_08875	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FEE41_08880	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FEE41_08885	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FEE41_08890	COG0089	rRNA binding
FEE41_08895	COG0088	Forms part of the polypeptide exit tunnel
FEE41_08900	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FEE41_08905	COG0051	transcription antitermination factor activity, RNA binding
FEE41_08910	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FEE41_08915	COG0049	tRNA binding
FEE41_08920	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FEE41_08925	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
FEE41_08930	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FEE41_08935	COG0085	RNA polymerase activity
FEE41_08945	COG0542	response to heat
FEE41_08950	COG4463	regulation of RNA biosynthetic process
FEE41_08990	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FEE41_08995	COG1428	Deoxynucleoside kinase
FEE41_09005	COG0833	amino acid
FEE41_09010	COG0028	Belongs to the TPP enzyme family
FEE41_09015	COG1959	2 iron, 2 sulfur cluster binding
FEE41_09035	COG1316	TRANSCRIPTIONal
FEE41_09045	COG2966	Psort location CytoplasmicMembrane, score
FEE41_09050	COG1278	Cold shock
FEE41_09070	COG2814	Major facilitator Superfamily
FEE41_09120	COG0367	asparagine synthase
FEE41_09125	COG0527	aspartate kinase activity
FEE41_09130	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FEE41_09180	COG0640	Transcriptional regulator
FEE41_09185	COG0564	pseudouridine synthase activity
FEE41_09190	COG0514	ATP-dependent DNA helicase (RecQ)
FEE41_09210	COG4690	dipeptidase activity
FEE41_09215	COG2502	aspartate--ammonia ligase
FEE41_09220	COG0017	Asparaginyl-tRNA synthetase
FEE41_09225	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FEE41_09235	COG1053	succinate dehydrogenase
FEE41_09240	COG0583	DNA-binding transcription factor activity
FEE41_09255	COG0572	uridine kinase
FEE41_09285	COG0308	aminopeptidase N
FEE41_09315	COG1302	Protein conserved in bacteria
FEE41_09330	COG2261	transglycosylase associated protein
FEE41_09335	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FEE41_09335	COG2755	lipolytic protein G-D-S-L family
FEE41_09350	COG2814	Major facilitator Superfamily
FEE41_09355	COG1733	regulation of RNA biosynthetic process
FEE41_09360	COG1266	CAAX protease self-immunity
FEE41_09365	COG1396	sequence-specific DNA binding
FEE41_09395	COG0464	growth
FEE41_09400	COG0519	Catalyzes the synthesis of GMP from XMP
FEE41_09400	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FEE41_09405	COG1072	(Pantothenic acid kinase))
FEE41_09410	COG2070	2-Nitropropane dioxygenase
FEE41_09415	COG3973	AAA domain
FEE41_09420	COG0586	Pfam SNARE associated Golgi protein
FEE41_09425	COG0456	acetyltransferase
FEE41_09425	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FEE41_09430	COG0475	glutathione-regulated potassium exporter activity
FEE41_09430	COG0569	domain protein
FEE41_09435	COG0588	phosphoglycerate mutase activity
FEE41_09450	COG2076	Multidrug Resistance protein
FEE41_09460	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FEE41_09490	COG1846	Transcriptional regulator
FEE41_09500	COG0531	amino acid
FEE41_09505	COG3394	polysaccharide catabolic process
FEE41_09510	COG1263	PTS System
FEE41_09510	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_09520	COG2190	(PTS) system
FEE41_09520	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_09520	COG1263	PTS System
FEE41_09525	COG0765	amino acid transport
FEE41_09530	COG0765	amino acid transport
FEE41_09535	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEE41_09555	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FEE41_09560	COG0436	Aminotransferase
FEE41_09565	COG0546	phosphoglycolate phosphatase activity
FEE41_09580	COG0735	belongs to the Fur family
FEE41_09585	COG0194	GDP metabolic process
FEE41_09610	COG0531	amino acid
FEE41_09625	COG2936	dipeptidyl-peptidase activity
FEE41_09630	COG2755	lipolytic protein G-D-S-L family
FEE41_09630	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FEE41_09640	COG2267	carboxylic ester hydrolase activity
FEE41_09645	COG0028	Belongs to the TPP enzyme family
FEE41_09650	COG0196	riboflavin kinase activity
FEE41_09655	COG0028	Belongs to the TPP enzyme family
FEE41_09660	COG2252	PERMEase
FEE41_09675	COG3475	LICD family
FEE41_09685	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
FEE41_09695	COG0477	Major facilitator Superfamily
FEE41_09710	COG1393	Belongs to the ArsC family
FEE41_09725	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FEE41_09740	COG0778	Nitroreductase
FEE41_09755	COG2017	converts alpha-aldose to the beta-anomer
FEE41_09765	COG0561	phosphatase activity
FEE41_09775	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FEE41_09780	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FEE41_09805	COG0025	NhaP-type Na H and K H
FEE41_09810	COG0812	UDP-N-acetylmuramate dehydrogenase activity
FEE41_09820	COG0708	Exodeoxyribonuclease III
FEE41_09835	COG0802	atpase or kinase
FEE41_09840	COG0280	phosphate acetyltransferase
FEE41_09845	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FEE41_09850	COG0561	phosphatase activity
FEE41_09860	COG1126	abc transporter atp-binding protein
FEE41_09865	COG0765	amino acid transport
FEE41_09875	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FEE41_09880	COG0557	exoribonuclease II activity
FEE41_09890	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FEE41_09895	COG0038	chloride channel
FEE41_09910	COG0148	phosphopyruvate hydratase activity
FEE41_09915	COG0149	triose-phosphate isomerase activity
FEE41_09920	COG0126	phosphoglycerate kinase activity
FEE41_09930	COG2390	Transcriptional regulator
FEE41_09935	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FEE41_09945	COG0740	serine-type endopeptidase activity
FEE41_09950	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FEE41_09960	COG1481	regulation of sporulation
FEE41_09970	COG1660	Displays ATPase and GTPase activities
FEE41_09980	COG0165	Argininosuccinate lyase
FEE41_09985	COG0137	argininosuccinate synthase activity
FEE41_09990	COG1854	S-ribosylhomocysteine lyase activity
FEE41_09995	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FEE41_10000	COG0556	nucleotide-excision repair
FEE41_10010	COG2814	Major facilitator Superfamily
FEE41_10020	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_10030	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FEE41_10040	COG2323	membrane
FEE41_10045	COG0492	ferredoxin-NADP+ reductase activity
FEE41_10060	COG1215	transferase activity, transferring glycosyl groups
FEE41_10080	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_10090	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FEE41_10095	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FEE41_10100	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
FEE41_10105	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FEE41_10110	COG1950	PFAM Membrane protein of
FEE41_10115	COG1983	PspC domain protein
FEE41_10120	COG0704	Plays a role in the regulation of phosphate uptake
FEE41_10125	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FEE41_10130	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FEE41_10135	COG0581	inorganic phosphate transmembrane transporter activity
FEE41_10140	COG0573	inorganic phosphate transmembrane transporter activity
FEE41_10145	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FEE41_10150	COG5002	protein histidine kinase activity
FEE41_10155	COG0745	RESPONSE REGULATOR receiver
FEE41_10170	COG0653	protein targeting
FEE41_10185	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
FEE41_10190	COG1739	Uncharacterized protein family UPF0029
FEE41_10195	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FEE41_10200	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FEE41_10205	COG0531	amino acid
FEE41_10210	COG0459	protein refolding
FEE41_10215	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FEE41_10225	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
FEE41_10230	COG0488	(ABC) transporter
FEE41_10240	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FEE41_10245	COG0456	acetyltransferase
FEE41_10250	COG0456	acetyltransferase
FEE41_10255	COG1214	PFAM Peptidase M22, glycoprotease
FEE41_10265	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FEE41_10275	COG3639	organic phosphonate transmembrane transporter activity
FEE41_10280	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEE41_10285	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
FEE41_10290	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FEE41_10305	COG4467	Involved in initiation control of chromosome replication
FEE41_10310	COG0470	DNA polymerase III
FEE41_10315	COG3870	Protein conserved in bacteria
FEE41_10320	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FEE41_10330	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
FEE41_10335	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
FEE41_10340	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FEE41_10355	COG2813	Specifically methylates the guanine in position
FEE41_10360	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FEE41_10365	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
FEE41_10375	COG1611	Belongs to the LOG family
FEE41_10395	COG0222	ribosome binding
FEE41_10400	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FEE41_10405	COG0081	regulation of translation
FEE41_10410	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FEE41_10420	COG0250	Participates in transcription elongation, termination and antitermination
FEE41_10430	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FEE41_10445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FEE41_10450	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
FEE41_10455	COG0215	cysteine-tRNA ligase activity
FEE41_10460	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FEE41_10465	COG4956	integral membrane protein (PIN domain superfamily)
FEE41_10490	COG0756	dUTP diphosphatase activity
FEE41_10500	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FEE41_10515	COG0588	phosphoglycerate mutase activity
FEE41_10520	COG0697	spore germination
FEE41_10530	COG1316	TRANSCRIPTIONal
FEE41_10535	COG0825	malonyl-CoA metabolic process
FEE41_10545	COG0439	Biotin carboxylase
FEE41_10555	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FEE41_10560	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_10560	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_10565	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_10565	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_10570	COG3933	PFAM sigma-54 factor interaction domain-containing protein
FEE41_10570	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
FEE41_10580	COG3716	PTS system mannose fructose sorbose family IID component
FEE41_10585	COG3715	PTS system
FEE41_10605	COG0083	homoserine kinase activity
FEE41_10610	COG0460	homoserine dehydrogenase
FEE41_10615	COG3091	SprT-like family
FEE41_10620	COG2183	response to ionizing radiation
FEE41_10635	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
FEE41_10640	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FEE41_10650	COG2188	Transcriptional regulator
FEE41_10660	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FEE41_10775	COG0582	viral genome integration into host DNA
FEE41_10795	COG3104	oligopeptide transport
FEE41_10835	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FEE41_10840	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FEE41_10845	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FEE41_10860	COG0037	tRNA processing
FEE41_10865	COG1098	S1 RNA binding domain
FEE41_10875	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
FEE41_10880	COG2244	polysaccharide biosynthetic process
FEE41_10885	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FEE41_10890	COG0193	aminoacyl-tRNA hydrolase activity
FEE41_10895	COG0039	L-malate dehydrogenase activity
FEE41_10915	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FEE41_10920	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FEE41_10925	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FEE41_10930	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FEE41_10935	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FEE41_10940	COG0505	Belongs to the CarA family
FEE41_10965	COG3158	transport of potassium into the cell
FEE41_10970	COG2337	Toxic component of a toxin-antitoxin (TA) module
FEE41_10975	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FEE41_10980	COG0736	holo-[acyl-carrier-protein] synthase activity
FEE41_11000	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
FEE41_11010	COG0501	Belongs to the peptidase M48B family
FEE41_11015	COG1704	LemA family
FEE41_11020	COG3764	Sortase (surface protein transpeptidase)
FEE41_11030	COG0254	rRNA binding
FEE41_11035	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FEE41_11040	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FEE41_11055	COG1760	l-serine dehydratase
FEE41_11060	COG1760	l-serine dehydratase
FEE41_11070	COG0814	amino acid
FEE41_11075	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FEE41_11080	COG0504	CTP synthase activity
FEE41_11085	COG3343	RNA polymerase activity
FEE41_11095	COG0095	Lipoate-protein ligase
FEE41_11100	COG1078	dGTPase activity
FEE41_11120	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FEE41_11130	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FEE41_11135	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FEE41_11155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
FEE41_11155	COG1321	iron dependent repressor
FEE41_11160	COG1121	(ABC) transporter
FEE41_11165	COG1073	alpha beta
FEE41_11175	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FEE41_11180	COG4466	Protein conserved in bacteria
FEE41_11185	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FEE41_11190	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
FEE41_11195	COG0084	hydrolase, TatD family'
FEE41_11210	COG2814	Major facilitator Superfamily
FEE41_11215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEE41_11215	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FEE41_11225	COG1801	Protein of unknown function DUF72
FEE41_11230	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FEE41_11245	COG0248	Ppx GppA phosphatase
FEE41_11260	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FEE41_11270	COG1940	carbohydrate kinase activity
FEE41_11275	COG2723	6-phospho-beta-galactosidase activity
FEE41_11280	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_11295	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_11300	COG2188	Transcriptional regulator
FEE41_11305	COG0180	Tryptophanyl-tRNA synthetase
FEE41_11310	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FEE41_11315	COG3973	AAA domain
FEE41_11350	COG2274	protein secretion by the type I secretion system
FEE41_11375	COG3279	Response regulator of the LytR AlgR family
FEE41_11425	COG1114	Component of the transport system for branched-chain amino acids
FEE41_11430	COG0561	phosphatase activity
FEE41_11440	COG0561	phosphatase activity
FEE41_11450	COG0110	maltose O-acetyltransferase activity
FEE41_11480	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_11490	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
FEE41_11500	COG1125	glycine betaine transport
FEE41_11520	COG0300	oxidoreductase activity
FEE41_11550	COG1881	PFAM PEBP family protein
FEE41_11555	COG3759	membrane
FEE41_11565	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
FEE41_11585	COG0004	ammonium transporteR
FEE41_11590	COG2814	Major facilitator Superfamily
FEE41_11605	COG1134	teichoic acid transport
FEE41_11610	COG1682	transport, permease protein
FEE41_11620	COG0436	Aminotransferase
FEE41_11625	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FEE41_11630	COG2011	ABC-type metal ion transport system permease component
FEE41_11655	COG1268	BioY protein
FEE41_11690	COG1454	alcohol dehydrogenase
FEE41_11690	COG1012	belongs to the aldehyde dehydrogenase family
FEE41_11700	COG1131	(ABC) transporter
FEE41_11705	COG1725	Transcriptional regulator
FEE41_11735	COG3842	ATPase activity
FEE41_11775	COG1252	NADH dehydrogenase
FEE41_11780	COG1846	Transcriptional regulator
FEE41_11790	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FEE41_11820	COG1388	LysM domain
FEE41_11820	COG3942	CHAP domain
FEE41_11825	COG0741	lytic transglycosylase activity
FEE41_11840	COG1136	(ABC) transporter
FEE41_11845	COG0577	efflux transmembrane transporter activity
FEE41_11855	COG2818	Glycosylase
FEE41_11860	COG1033	growth of symbiont in host cell
FEE41_11860	COG1033	growth of symbiont in host cell
FEE41_11860	COG2409	Drug exporters of the RND superfamily
FEE41_11860	COG2409	Drug exporters of the RND superfamily
FEE41_11870	COG2357	RelA SpoT domain protein
FEE41_11880	COG0277	FAD linked oxidase domain protein
FEE41_11885	COG1316	TRANSCRIPTIONal
FEE41_11900	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_11905	COG1737	Transcriptional regulator
FEE41_11915	COG0745	RESPONSE REGULATOR receiver
FEE41_11920	COG5002	protein histidine kinase activity
FEE41_11930	COG2814	Major facilitator Superfamily
FEE41_11950	COG1914	H( )-stimulated, divalent metal cation uptake system
FEE41_11955	COG1309	transcriptional regulator
FEE41_11960	COG1959	2 iron, 2 sulfur cluster binding
FEE41_11970	COG0163	prenyltransferase activity
FEE41_11980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_11980	COG2190	(PTS) system
FEE41_11980	COG1263	PTS System
FEE41_11985	COG1263	PTS System
FEE41_11985	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_11985	COG2190	(PTS) system
FEE41_11990	COG0366	Alpha amylase catalytic
FEE41_11995	COG2188	Transcriptional regulator
FEE41_12025	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FEE41_12030	COG0626	cystathionine gamma-synthase activity
FEE41_12035	COG1045	serine acetyltransferase
FEE41_12040	COG0431	NADPH-dependent FMN reductase
FEE41_12070	COG3118	belongs to the thioredoxin family
FEE41_12080	COG0246	Mannitol dehydrogenase
FEE41_12085	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_12095	COG2213	PTS system mannitol-specific
FEE41_12110	COG1053	succinate dehydrogenase
FEE41_12110	COG3976	FMN-binding domain protein
FEE41_12120	COG0363	glucosamine-6-phosphate deaminase activity
FEE41_12135	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FEE41_12145	COG0386	Belongs to the glutathione peroxidase family
FEE41_12155	COG4172	Belongs to the ABC transporter superfamily
FEE41_12175	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FEE41_12180	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FEE41_12210	COG0667	Aldo Keto reductase
FEE41_12215	COG0406	alpha-ribazole phosphatase activity
FEE41_12220	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FEE41_12225	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FEE41_12235	COG4166	transmembrane transport
FEE41_12240	COG4166	transmembrane transport
FEE41_12315	COG3842	ATPase activity
FEE41_12320	COG0366	Alpha amylase catalytic
FEE41_12330	COG3833	ABC-type maltose transport systems, permease component
FEE41_12335	COG1175	transmembrane transport
FEE41_12340	COG2182	Extracellular solute-binding protein
FEE41_12345	COG0366	Alpha amylase catalytic
FEE41_12350	COG1609	Transcriptional regulator
FEE41_12355	COG1609	Transcriptional regulator
FEE41_12360	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_12365	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
FEE41_12370	COG1461	Dihydroxyacetone kinase
FEE41_12375	COG2376	Dihydroxyacetone kinase
FEE41_12380	COG2376	Dihydroxyacetone kinase
FEE41_12385	COG1309	transcriptional regulator
FEE41_12390	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
FEE41_12395	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
FEE41_12410	COG1131	(ABC) transporter
FEE41_12415	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_12440	COG2188	Transcriptional regulator
FEE41_12450	COG4720	Psort location CytoplasmicMembrane, score
FEE41_12455	COG1122	ATPase activity
FEE41_12460	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FEE41_12490	COG0667	Aldo Keto reductase
FEE41_12495	COG0656	L-ascorbic acid biosynthetic process
FEE41_12500	COG2807	transmembrane transport
FEE41_12540	COG1983	PspC domain protein
FEE41_12550	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FEE41_12555	COG2267	carboxylic ester hydrolase activity
FEE41_12565	COG1113	amino acid transport
FEE41_12580	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
FEE41_12590	COG0352	thiamine-phosphate diphosphorylase activity
FEE41_12595	COG0351	phosphomethylpyrimidine kinase
FEE41_12600	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FEE41_12605	COG0604	alcohol dehydrogenase
FEE41_12610	COG1606	tRNA processing
FEE41_12615	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_12620	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
FEE41_12625	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
FEE41_12630	COG1691	(AIR) carboxylase
FEE41_12635	COG3875	lactate racemase activity
FEE41_12640	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEE41_12645	COG0310	cobalt ion transport
FEE41_12650	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FEE41_12655	COG1122	ATPase activity
FEE41_12680	COG4166	transmembrane transport
FEE41_12690	COG3022	response to hydroperoxide
FEE41_12695	COG2267	carboxylic ester hydrolase activity
FEE41_12720	COG0604	alcohol dehydrogenase
FEE41_12755	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
FEE41_12775	COG2368	4-hydroxyphenylacetate
FEE41_12780	COG2365	Tyrosine phosphatase family
FEE41_12790	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FEE41_12795	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEE41_12805	COG2508	Transcriptional regulator
FEE41_12810	COG0778	Nitroreductase
FEE41_12820	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_12825	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FEE41_12840	COG0471	metal ion transport
FEE41_12845	COG1053	succinate dehydrogenase
FEE41_12845	COG3976	FMN-binding domain protein
FEE41_12845	COG0431	NADPH-dependent FMN reductase
FEE41_12865	COG1573	uracil-dna glycosylase
FEE41_12875	COG1012	belongs to the aldehyde dehydrogenase family
FEE41_12885	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FEE41_12890	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FEE41_12895	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
FEE41_12900	COG4853	Protein conserved in bacteria
FEE41_12910	COG5002	protein histidine kinase activity
FEE41_12915	COG0745	RESPONSE REGULATOR receiver
FEE41_12930	COG1278	Cold shock
FEE41_12940	COG1554	hydrolase, family 65, central catalytic
FEE41_12945	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEE41_12960	COG0058	SHG alpha-glucan phosphorylase activity
FEE41_12965	COG0297	glycogen (starch) synthase activity
FEE41_12970	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FEE41_12975	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
FEE41_12980	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FEE41_12985	COG4166	transmembrane transport
FEE41_12990	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FEE41_12995	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FEE41_13000	COG2814	Major facilitator Superfamily
FEE41_13005	COG0305	Participates in initiation and elongation during chromosome replication
FEE41_13010	COG0359	binds to the 23S rRNA
FEE41_13020	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FEE41_13025	COG0629	single-stranded DNA binding
FEE41_13030	COG0360	Binds together with S18 to 16S ribosomal RNA
FEE41_13040	COG0187	DNA topoisomerase II activity
FEE41_13045	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
FEE41_13050	COG2501	S4 domain
FEE41_13055	COG0592	DNA-directed DNA polymerase activity
FEE41_13060	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FEE41_13065	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FEE41_13070	COG0594	ribonuclease P activity
FEE41_13075	COG0706	membrane insertase activity
FEE41_13080	COG4166	transmembrane transport
FEE41_13090	COG1847	R3H domain protein
FEE41_13095	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FEE41_13100	COG0445	tRNA wobble uridine modification
FEE41_13140	COG1307	EDD domain protein, DegV family
FEE41_13155	COG3479	Phenolic acid decarboxylase
FEE41_13160	COG1695	Transcriptional regulator
FEE41_13170	COG1012	belongs to the aldehyde dehydrogenase family
FEE41_13170	COG1454	alcohol dehydrogenase
FEE41_13175	COG1609	Transcriptional regulator
FEE41_13185	COG1869	D-ribose catabolic process
FEE41_13190	COG4975	Glucose uptake
FEE41_13210	COG3730	PTS system glucitol sorbitol-specific
FEE41_13215	COG3732	PTS system glucitol sorbitol-specific
FEE41_13230	COG2188	Transcriptional regulator
FEE41_13235	COG1132	(ABC) transporter
FEE41_13240	COG1132	(ABC) transporter
FEE41_13245	COG2207	Transcriptional regulator
FEE41_13245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FEE41_13260	COG0395	ABC-type sugar transport system, permease component
FEE41_13270	COG0366	Alpha amylase catalytic
FEE41_13280	COG2972	Histidine kinase
FEE41_13285	COG4753	response regulator
FEE41_13285	COG2207	Transcriptional regulator
FEE41_13295	COG3842	ATPase activity
FEE41_13305	COG2188	Transcriptional regulator
FEE41_13315	COG0383	alpha-mannosidase activity
FEE41_13320	COG1940	carbohydrate kinase activity
FEE41_13325	COG2723	6-phospho-beta-galactosidase activity
FEE41_13370	COG1609	Transcriptional regulator
FEE41_13370	COG2207	Transcriptional regulator
FEE41_13455	COG1349	DNA-binding transcription factor activity
FEE41_13460	COG2207	Transcriptional regulator
FEE41_13465	COG2814	Major facilitator Superfamily
FEE41_13470	COG1070	Carbohydrate kinase
FEE41_13475	COG3254	rhamnose metabolic process
FEE41_13480	COG4806	L-rhamnose isomerase
FEE41_13485	COG0235	Class ii aldolase
FEE41_13500	COG0028	Belongs to the TPP enzyme family
FEE41_13505	COG1959	2 iron, 2 sulfur cluster binding
FEE41_13510	COG0028	Belongs to the TPP enzyme family
FEE41_13515	COG1304	FMN binding
FEE41_13530	COG4512	PFAM Accessory gene regulator B
FEE41_13550	COG1393	Belongs to the ArsC family
FEE41_13560	COG2261	transglycosylase associated protein
FEE41_13590	COG3010	Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
FEE41_13595	COG1609	Transcriptional regulator
FEE41_13615	COG2160	L-arabinose isomerase activity
FEE41_13620	COG0110	maltose O-acetyltransferase activity
FEE41_13630	COG3957	D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase
FEE41_13635	COG1349	DNA-binding transcription factor activity
FEE41_13645	COG3414	Phosphotransferase system galactitol-specific IIB component
FEE41_13650	COG3775	system Galactitol-specific IIC component
FEE41_13665	COG3711	transcriptional antiterminator
FEE41_13685	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
FEE41_13700	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FEE41_13715	COG2211	Major facilitator Superfamily
FEE41_13735	COG1263	PTS System
FEE41_13735	COG2190	(PTS) system
FEE41_13735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_13740	COG2723	6-phospho-beta-galactosidase activity
FEE41_13745	COG2723	6-phospho-beta-galactosidase activity
FEE41_13755	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FEE41_13760	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_13760	COG1263	PTS System
FEE41_13765	COG1737	Transcriptional regulator
FEE41_13770	COG1263	PTS System
FEE41_13770	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_13770	COG2190	(PTS) system
FEE41_13775	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_13775	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_13775	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_13780	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_13780	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_13785	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
FEE41_13795	COG3711	transcriptional antiterminator
FEE41_13805	COG2723	6-phospho-beta-galactosidase activity
FEE41_13815	COG2971	BadF BadG BcrA BcrD
FEE41_13820	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
FEE41_13825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_13830	COG2188	Transcriptional regulator
FEE41_13835	COG2267	carboxylic ester hydrolase activity
FEE41_13845	COG2271	Major facilitator Superfamily
FEE41_13860	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_13875	COG2271	Major facilitator Superfamily
FEE41_13880	COG0583	DNA-binding transcription factor activity
FEE41_13885	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FEE41_13890	COG0710	3-dehydroquinate dehydratase activity
FEE41_13910	COG0667	Aldo Keto reductase
FEE41_13920	COG2017	converts alpha-aldose to the beta-anomer
FEE41_13925	COG2211	Major facilitator Superfamily
FEE41_13925	COG2190	(PTS) system
FEE41_13945	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
FEE41_13950	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FEE41_13955	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
FEE41_13960	COG1609	Transcriptional regulator
FEE41_13965	COG2944	sequence-specific DNA binding
FEE41_13970	COG2184	nucleotidyltransferase activity
FEE41_13990	COG0477	Major facilitator Superfamily
FEE41_14000	COG1609	Transcriptional regulator
FEE41_14005	COG1874	Beta-galactosidase
FEE41_14015	COG1114	Component of the transport system for branched-chain amino acids
FEE41_14030	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_14080	COG0446	pyridine nucleotide-disulphide oxidoreductase
FEE41_14105	COG3590	peptidase
FEE41_14110	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FEE41_14130	COG1937	Protein conserved in bacteria
FEE41_14135	COG3118	belongs to the thioredoxin family
FEE41_14140	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
FEE41_14145	COG2217	Heavy metal translocating P-type atpase
FEE41_14165	COG2226	methyltransferase
FEE41_14175	COG1309	transcriptional regulator
FEE41_14215	COG0076	glutamate decarboxylase activity
FEE41_14240	COG2207	Transcriptional regulator
FEE41_14275	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
FEE41_14280	COG1968	undecaprenyl-diphosphatase activity
FEE41_14300	COG0656	L-ascorbic acid biosynthetic process
FEE41_14310	COG0737	Belongs to the 5'-nucleotidase family
FEE41_14370	COG0477	Major facilitator Superfamily
FEE41_14395	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
FEE41_14410	COG0697	spore germination
FEE41_14430	COG0071	Belongs to the small heat shock protein (HSP20) family
FEE41_14445	COG1194	a g-specific adenine glycosylase
FEE41_14455	COG3189	MarR family transcriptional regulator
FEE41_14460	COG1393	Belongs to the ArsC family
FEE41_14475	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
FEE41_14485	COG1113	amino acid transport
FEE41_14505	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FEE41_14510	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
FEE41_14520	COG2315	Protein conserved in bacteria
FEE41_14530	COG2217	Heavy metal translocating P-type atpase
FEE41_14565	COG4989	oxidoreductase activity
FEE41_14570	COG2151	metal-sulfur cluster biosynthetic enzyme
FEE41_14580	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
FEE41_14585	COG1882	Formate acetyltransferase
FEE41_14590	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
FEE41_14620	COG2814	Major facilitator Superfamily
FEE41_14625	COG0803	Belongs to the bacterial solute-binding protein 9 family
FEE41_14640	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FEE41_14645	COG0302	gtp cyclohydrolase
FEE41_14655	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FEE41_14690	COG0640	Transcriptional regulator
FEE41_14695	COG1272	protein, Hemolysin III
FEE41_14710	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
FEE41_14715	COG0628	permease
FEE41_14720	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
FEE41_14725	COG3158	transport of potassium into the cell
FEE41_14730	COG0531	amino acid
FEE41_14740	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FEE41_14745	COG2365	Tyrosine phosphatase family
FEE41_14750	COG0516	GMP reductase activity
FEE41_14755	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FEE41_14760	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
FEE41_14775	COG1929	Belongs to the glycerate kinase type-1 family
FEE41_14785	COG1562	ergosterol biosynthetic process
FEE41_14790	COG1233	COG1233 Phytoene dehydrogenase and related
FEE41_14795	COG2738	Putative neutral zinc metallopeptidase
FEE41_14805	COG1307	EDD domain protein, DegV family
FEE41_14815	COG1380	Effector of murein hydrolase LrgA
FEE41_14840	COG0735	belongs to the Fur family
FEE41_14870	COG1263	PTS System
FEE41_14870	COG2190	(PTS) system
FEE41_14870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_14885	COG3711	transcriptional antiterminator
FEE41_14885	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_14890	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_14890	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_14890	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_14895	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_14900	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_14900	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
FEE41_14900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
FEE41_14905	COG0383	alpha-mannosidase activity
FEE41_14915	COG0561	phosphatase activity
FEE41_14930	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FEE41_14935	COG4619	ABC transporter
FEE41_14940	COG0390	transport system, permease component
FEE41_14950	COG1609	Transcriptional regulator
FEE41_14955	COG0366	Alpha amylase catalytic
FEE41_14960	COG2190	(PTS) system
FEE41_14960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_14960	COG1263	PTS System
FEE41_14985	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEE41_14990	COG1126	abc transporter atp-binding protein
FEE41_14995	COG0765	amino acid transport
FEE41_15000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FEE41_15005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FEE41_15010	COG0583	DNA-binding transcription factor activity
FEE41_15025	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
FEE41_15030	COG0357	Ribosomal RNA small subunit methyltransferase G
FEE41_15040	COG1192	Involved in chromosome partitioning
FEE41_15045	COG1475	DNA binding
FEE41_15050	COG4481	Protein conserved in bacteria
FEE41_15055	COG0012	GTP binding
FEE41_15065	COG0517	IMP dehydrogenase activity
FEE41_15065	COG0516	GMP reductase activity
FEE41_15070	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FEE41_15090	COG1686	Belongs to the peptidase S11 family
FEE41_15095	COG1247	-acetyltransferase
FEE41_15135	COG2815	serine threonine protein kinase
FEE41_15135	COG0515	serine threonine protein kinase
FEE41_15145	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FEE41_15155	COG1846	Transcriptional regulator
FEE41_15155	COG1940	carbohydrate kinase activity
FEE41_15160	COG0628	permease
FEE41_15165	COG0588	phosphoglycerate mutase activity
FEE41_15190	COG0477	Major facilitator Superfamily
FEE41_15205	COG0656	L-ascorbic acid biosynthetic process
FEE41_15210	COG1376	ErfK ybiS ycfS ynhG family protein
FEE41_15230	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FEE41_15240	COG1136	(ABC) transporter
FEE41_15240	COG0577	efflux transmembrane transporter activity
FEE41_15265	COG0693	protein deglycase activity
FEE41_15285	COG0789	Transcriptional regulator
FEE41_15305	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_15310	COG2723	6-phospho-beta-galactosidase activity
FEE41_15320	COG0783	Belongs to the Dps family
FEE41_15330	COG1053	succinate dehydrogenase
FEE41_15340	COG2816	NAD+ diphosphatase activity
FEE41_15355	COG0481	GTPase activity
FEE41_15395	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_15400	COG0110	maltose O-acetyltransferase activity
FEE41_15405	COG4221	oxidoreductase activity
FEE41_15415	COG1309	transcriptional regulator
FEE41_15420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FEE41_15425	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FEE41_15430	COG1120	ATPase activity
FEE41_15435	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FEE41_15445	COG0477	Major facilitator Superfamily
FEE41_15450	COG0667	Aldo Keto reductase
FEE41_15470	COG0300	oxidoreductase activity
FEE41_15475	COG1733	regulation of RNA biosynthetic process
FEE41_15490	COG1012	belongs to the aldehyde dehydrogenase family
FEE41_15500	COG1309	transcriptional regulator
FEE41_15515	COG3279	Response regulator of the LytR AlgR family
FEE41_15520	COG0367	asparagine synthase
FEE41_15530	COG2814	Major facilitator Superfamily
FEE41_15535	COG1733	regulation of RNA biosynthetic process
FEE41_15540	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FEE41_15580	COG1063	alcohol dehydrogenase
FEE41_15640	COG2217	Heavy metal translocating P-type atpase
FEE41_15665	COG0531	amino acid
FEE41_15680	COG1028	Short-chain dehydrogenase reductase Sdr
FEE41_15685	COG1473	amidohydrolase
FEE41_15695	COG1132	(ABC) transporter
FEE41_15700	COG1132	(ABC) transporter
FEE41_15745	COG4221	oxidoreductase activity
FEE41_15760	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
FEE41_15785	COG0803	Belongs to the bacterial solute-binding protein 9 family
FEE41_15805	COG0741	lytic transglycosylase activity
FEE41_15810	COG0789	Transcriptional regulator
FEE41_15820	COG2723	6-phospho-beta-galactosidase activity
FEE41_15825	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_15830	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
FEE41_15865	COG1136	(ABC) transporter
FEE41_15865	COG0577	efflux transmembrane transporter activity
FEE41_15875	COG0640	Transcriptional regulator
FEE41_15895	COG1914	H( )-stimulated, divalent metal cation uptake system
FEE41_15905	COG2246	polysaccharide biosynthetic process
FEE41_15910	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FEE41_15910	COG5549	protein import
FEE41_15925	COG0559	Belongs to the binding-protein-dependent transport system permease family
FEE41_15940	COG0410	ABC transporter
FEE41_15945	COG3620	sequence-specific DNA binding
FEE41_15945	COG0617	tRNA 3'-terminal CCA addition
FEE41_15945	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
FEE41_15975	COG4120	Belongs to the binding-protein-dependent transport system permease family
FEE41_15985	COG2190	(PTS) system
FEE41_15985	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
FEE41_15985	COG1263	PTS System
FEE41_15990	COG0778	Nitroreductase
FEE41_16000	COG1132	(ABC) transporter
FEE41_16005	COG1940	carbohydrate kinase activity
FEE41_16030	COG0697	spore germination
FEE41_16085	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FEE41_16095	COG0583	DNA-binding transcription factor activity
FEE41_16115	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FEE41_16125	COG0242	peptide deformylase activity
FEE41_16135	COG1328	CTP reductase activity
FEE41_16145	COG2200	EAL domain
FEE41_16185	COG2270	Major facilitator Superfamily
FEE41_16200	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FEE41_16210	COG0561	phosphatase activity
FEE41_16215	COG0488	(ABC) transporter
FEE41_16240	COG0640	Transcriptional regulator
FEE41_16250	COG1511	domain protein
FEE41_16250	COG1511	domain protein
FEE41_16265	COG2814	Major facilitator Superfamily
FEE41_16270	COG1132	(ABC) transporter
FEE41_16275	COG1132	(ABC) transporter
FEE41_16280	COG0667	Aldo Keto reductase
FEE41_16290	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities