locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 499724 499794 - tRNA-Cys identified by tRNAscan-SE%3B putative tRNA rna6 http://www.ncbi.nlm.nih.gov/gene/?term= 742350 742435 - tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna22 http://www.ncbi.nlm.nih.gov/gene/?term= 3045354 3045441 - tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna73 http://www.ncbi.nlm.nih.gov/gene/?term= 742444 742515 - tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna23 http://www.ncbi.nlm.nih.gov/gene/?term= 2864804 2864878 + tRNA-Ile identified by tRNAscan-SE%3B putative tRNA rna66 http://www.ncbi.nlm.nih.gov/gene/?term= 2863883 2863968 + tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna56 http://www.ncbi.nlm.nih.gov/gene/?term= 2864365 2864454 + tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna61 http://www.ncbi.nlm.nih.gov/gene/?term= 2863796 2863867 + tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna55 http://www.ncbi.nlm.nih.gov/gene/?term= 1125615 1125699 - tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna32 http://www.ncbi.nlm.nih.gov/gene/?term= 2864461 2864534 + tRNA-Met identified by tRNAscan-SE%3B putative tRNA rna62 http://www.ncbi.nlm.nih.gov/gene/?term= 742616 742697 - tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna25 http://www.ncbi.nlm.nih.gov/gene/?term= 499977 500047 - tRNA-Trp identified by tRNAscan-SE%3B putative tRNA rna9 http://www.ncbi.nlm.nih.gov/gene/?term= 3004388 3004478 - tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna71 http://www.ncbi.nlm.nih.gov/gene/?term= 3004718 3004810 - tRNA-Trp identified by tRNAscan-SE%3B putative tRNA rna72 http://www.ncbi.nlm.nih.gov/gene/?term= 2864252 2864325 + tRNA-Met identified by tRNAscan-SE%3B putative tRNA rna60 http://www.ncbi.nlm.nih.gov/gene/?term= 2683657 2683728 + tRNA-Trp identified by tRNAscan-SE%3B putative tRNA rna49 http://www.ncbi.nlm.nih.gov/gene/?term= 1161126 1161208 - tRNA-Tyr identified by tRNAscan-SE%3B putative tRNA rna34 http://www.ncbi.nlm.nih.gov/gene/?term= 2864642 2864714 + tRNA-Phe identified by tRNAscan-SE%3B putative tRNA rna64 http://www.ncbi.nlm.nih.gov/gene/?term= 2863979 2864052 + tRNA-Arg identified by tRNAscan-SE%3B putative tRNA rna57 http://www.ncbi.nlm.nih.gov/gene/?term= 1854275 1854347 - tRNA-Ala identified by tRNAscan-SE%3B putative tRNA rna40 http://www.ncbi.nlm.nih.gov/gene/?term= 2665702 2665773 - tRNA-Asn identified by tRNAscan-SE%3B putative tRNA rna42 http://www.ncbi.nlm.nih.gov/gene/?term= 1161045 1161116 - tRNA-Gln identified by tRNAscan-SE%3B putative tRNA rna33 http://www.ncbi.nlm.nih.gov/gene/?term= 2667237 2667309 - tRNA-Gln identified by tRNAscan-SE%3B putative tRNA rna43 http://www.ncbi.nlm.nih.gov/gene/?term= 2863136 2863208 + tRNA-Val identified by tRNAscan-SE%3B putative tRNA rna50 http://www.ncbi.nlm.nih.gov/gene/?term= 503898 503970 - tRNA-Ala identified by tRNAscan-SE%3B putative tRNA rna16 http://www.ncbi.nlm.nih.gov/gene/?term= 742061 742134 - tRNA-Pro identified by tRNAscan-SE%3B putative tRNA rna19 http://www.ncbi.nlm.nih.gov/gene/?term= 2863213 2863285 + tRNA-Lys identified by tRNAscan-SE%3B putative tRNA rna51 http://www.ncbi.nlm.nih.gov/gene/?term= 500144 500216 - tRNA-Phe identified by tRNAscan-SE%3B putative tRNA rna11 http://www.ncbi.nlm.nih.gov/gene/?term= 430240 430312 + tRNA-His identified by tRNAscan-SE%3B putative tRNA rna4 http://www.ncbi.nlm.nih.gov/gene/?term= 2864538 2864612 + tRNA-Asp identified by tRNAscan-SE%3B putative tRNA rna63 http://www.ncbi.nlm.nih.gov/gene/?term= 2683351 2683423 + tRNA-Asn identified by tRNAscan-SE%3B putative tRNA rna48 http://www.ncbi.nlm.nih.gov/gene/?term= 1086154 1086224 + tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna31 http://www.ncbi.nlm.nih.gov/gene/?term= 1086075 1086148 + tRNA-Met identified by tRNAscan-SE%3B putative tRNA rna30 http://www.ncbi.nlm.nih.gov/gene/?term= 2863707 2863779 + tRNA-Thr identified by tRNAscan-SE%3B putative tRNA rna54 http://www.ncbi.nlm.nih.gov/gene/?term= 1071165 1071236 - tRNA-Trp identified by tRNAscan-SE%3B putative tRNA rna28 http://www.ncbi.nlm.nih.gov/gene/?term= 500272 500344 - tRNA-Val identified by tRNAscan-SE%3B putative tRNA rna12 http://www.ncbi.nlm.nih.gov/gene/?term= 388843 388926 + tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna3 http://www.ncbi.nlm.nih.gov/gene/?term= 2667700 2667772 + tRNA-Glu identified by tRNAscan-SE%3B putative tRNA rna44 http://www.ncbi.nlm.nih.gov/gene/?term= 2865148 2865222 + tRNA-Asp identified by tRNAscan-SE%3B putative tRNA rna70 http://www.ncbi.nlm.nih.gov/gene/?term= 1167760 1167832 - tRNA-Ala identified by tRNAscan-SE%3B putative tRNA rna37 http://www.ncbi.nlm.nih.gov/gene/?term= 2863540 2863612 + tRNA-Lys identified by tRNAscan-SE%3B putative tRNA rna53 http://www.ncbi.nlm.nih.gov/gene/?term= 1167874 1167948 - tRNA-Ile identified by tRNAscan-SE%3B putative tRNA rna38 http://www.ncbi.nlm.nih.gov/gene/?term= 1164413 1164485 - tRNA-Asn identified by tRNAscan-SE%3B putative tRNA rna36 http://www.ncbi.nlm.nih.gov/gene/?term= 742185 742258 - tRNA-Pro identified by tRNAscan-SE%3B putative tRNA rna20 http://www.ncbi.nlm.nih.gov/gene/?term= 500349 500421 - tRNA-Glu identified by tRNAscan-SE%3B putative tRNA rna13 http://www.ncbi.nlm.nih.gov/gene/?term= 370074 370144 - tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna2 http://www.ncbi.nlm.nih.gov/gene/?term= 2670889 2670975 - tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna46 http://www.ncbi.nlm.nih.gov/gene/?term= 504012 504086 - tRNA-Ile identified by tRNAscan-SE%3B putative tRNA rna17 http://www.ncbi.nlm.nih.gov/gene/?term= 499817 499888 - tRNA-Gln identified by tRNAscan-SE%3B putative tRNA rna7 http://www.ncbi.nlm.nih.gov/gene/?term= 499896 499968 - tRNA-His identified by tRNAscan-SE%3B putative tRNA rna8 http://www.ncbi.nlm.nih.gov/gene/?term= 957183 957254 + tRNA-Arg identified by tRNAscan-SE%3B putative tRNA rna27 http://www.ncbi.nlm.nih.gov/gene/?term= 2864727 2864797 + tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna65 http://www.ncbi.nlm.nih.gov/gene/?term= 1071470 1071542 - tRNA-Asn identified by tRNAscan-SE%3B putative tRNA rna29 http://www.ncbi.nlm.nih.gov/gene/?term= 611757 611829 - tRNA-Arg identified by tRNAscan-SE%3B putative tRNA rna18 http://www.ncbi.nlm.nih.gov/gene/?term= 2864058 2864131 + tRNA-Pro identified by tRNAscan-SE%3B putative tRNA rna58 http://www.ncbi.nlm.nih.gov/gene/?term= 500443 500532 - tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna14 http://www.ncbi.nlm.nih.gov/gene/?term= 902854 902925 - tRNA-Asn identified by tRNAscan-SE%3B putative tRNA rna26 http://www.ncbi.nlm.nih.gov/gene/?term= 210864 210937 - tRNA-Arg identified by tRNAscan-SE%3B putative tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= 742266 742339 - tRNA-Arg identified by tRNAscan-SE%3B putative tRNA rna21 http://www.ncbi.nlm.nih.gov/gene/?term= 2864883 2864970 + tRNA-Ser identified by tRNAscan-SE%3B putative tRNA rna67 http://www.ncbi.nlm.nih.gov/gene/?term= 2865072 2865145 + tRNA-Met identified by tRNAscan-SE%3B putative tRNA rna69 http://www.ncbi.nlm.nih.gov/gene/?term= 2670561 2670631 - tRNA-Gly identified by tRNAscan-SE%3B putative tRNA rna45 http://www.ncbi.nlm.nih.gov/gene/?term= 2864163 2864236 + tRNA-Met identified by tRNAscan-SE%3B putative tRNA rna59 http://www.ncbi.nlm.nih.gov/gene/?term= 500056 500138 - tRNA-Tyr identified by tRNAscan-SE%3B putative tRNA rna10 http://www.ncbi.nlm.nih.gov/gene/?term= 2863463 2863535 + tRNA-Val identified by tRNAscan-SE%3B putative tRNA rna52 http://www.ncbi.nlm.nih.gov/gene/?term= 369943 370017 - tRNA-Asp identified by tRNAscan-SE%3B putative tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= 2671023 2671108 - tRNA-Lys identified by tRNAscan-SE%3B putative tRNA rna47 http://www.ncbi.nlm.nih.gov/gene/?term= 1164295 1164367 - tRNA-Thr identified by tRNAscan-SE%3B putative tRNA rna35 http://www.ncbi.nlm.nih.gov/gene/?term= 499584 499668 - tRNA-Leu identified by tRNAscan-SE%3B putative tRNA rna5 http://www.ncbi.nlm.nih.gov/gene/?term= 742540 742612 - tRNA-Thr identified by tRNAscan-SE%3B putative tRNA rna24 http://www.ncbi.nlm.nih.gov/gene/?term= 1632058 1632130 + tRNA-Lys identified by tRNAscan-SE%3B putative tRNA rna39 http://www.ncbi.nlm.nih.gov/gene/?term= 2864990 2865062 + tRNA-Glu identified by tRNAscan-SE%3B putative tRNA rna68 http://www.ncbi.nlm.nih.gov/gene/?term= SN35N_0001 SN35N_0001 SN35N_0001 460 1980 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0001 SN35N_0002 SN35N_0002 SN35N_0002 1998 3278 - glycosyltransferase glycosyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold%3B cl11394%3B~glycosyltransferase like family 2%3B pfam13641%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0002 SN35N_0003 SN35N_0003 SN35N_0003 3508 3906 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0003 SN35N_0004 SN35N_0004 gshR3 gshR3 3986 5335 - glutathione reductase glutathione reductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes [energy production and conversion]%3B COG1249 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0004 SN35N_0005 SN35N_0005 SN35N_0005 5401 5838 - transcription regulator MarR family%3B pfam01047%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0005 SN35N_0006 SN35N_0006 SN35N_0006 5995 6522 - transcription repressor N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferases [general function prediction only]%3B COG0456%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription repressor [Lactobacillus plantarum subsp. plantarum P-8] gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0006 SN35N_0007 SN35N_0007 tarL tarL 6621 8519 - ribitolphosphotransferase CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase%3B pfam04464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [cell envelope biogenesis%2C outer membrane]%3B COG1887%3B~ribitolphosphotransferase [Lactobacillus plantarum WCFS1] gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0007 SN35N_0008 SN35N_0008 tarK tarK 8520 9641 - ribitolphosphotransferase CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase%3B pfam04464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [cell envelope biogenesis%2C outer membrane]%3B COG1887%3B~ribitolphosphotransferase [Lactobacillus plantarum WCFS1] gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0008 SN35N_0009 SN35N_0009 tarJ tarJ 9629 10654 - ribitol-5-phosphate 2-dehydrogenase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative NAD(P) binding site [chemical binding]%3B~putative catalytic Zn binding site [ion binding]%3B~ribitol-5-phosphate 2-dehydrogenase [Lactobacillus plantarum ZJ316]%3B~ribitol-5-phosphate dehydrogenase%3B cd08237%3B~threonine dehydrogenase and related Zn-dependent dehydrogenases [amino acid transport and metabolism / general function prediction only]%3B COG1063 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0009 SN35N_0010 SN35N_0010 SN35N_0010 10656 11357 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Listeria monocytogenes]%3B~CDP-ME synthetase is involved in mevalonate-independent isoprenoid production%3B cd02516%3B~dimer interface%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~substrate binding site gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0010 SN35N_0011 SN35N_0011 SN35N_0011 11638 12987 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0011 SN35N_0012 SN35N_0012 SN35N_0012 13014 14606 + L-lactate transport protein L-lactate permease [energy production and conversion]%3B COG1620%3B~L-lactate permease%3B cl00701%3B~L-lactate transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0012 SN35N_0013 SN35N_0013 SN35N_0013 14721 15071 + hypothetical protein hypothetical protein zj316_1801 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0013 SN35N_0014 SN35N_0014 SN35N_0014 15222 16106 - lipoprotein precursor identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0014 SN35N_0015 SN35N_0015 SN35N_0015 16299 17639 - amino acid transport protein amino acid transport protein [Lactobacillus plantarum JDM1]%3B~gamma-aminobutyrate permease and related permeases [amino acid transport and metabolism]%3B COG1113%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0015 SN35N_0016 SN35N_0016 SN35N_0016 17864 18721 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein [function unknown] gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0016 SN35N_0017 SN35N_0017 SN35N_0017 18857 19594 - hypothetical membrane protein hypothetical membrane protein%2C DUF1003 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1003)%3B pfam06210 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0017 SN35N_0018 SN35N_0018 SN35N_0018 19823 20131 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum NC8 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0018 SN35N_0019 SN35N_0019 SN35N_0019 20159 20491 - hypothetical protein hypothetical protein zj316_1794 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0019 SN35N_0020 SN35N_0020 SN35N_0020 20829 22016 + transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0020 SN35N_0021 SN35N_0021 SN35N_0021 22219 23007 - integral membrane protein HIT family signature motif%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~nucleotide binding site/active site [active]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0021 SN35N_0022 SN35N_0022 SN35N_0022 23089 23385 - RNA-binding protein RNA-binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein family (UPF0150)%3B pfam03681 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0022 SN35N_0023 SN35N_0023 SN35N_0023 23470 24210 - hypothetical protein hypothetical protein zj316_1789 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0023 SN35N_0024 SN35N_0024 SN35N_0024 24326 25063 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF975)%3B cl10504 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0024 SN35N_0025 SN35N_0025 SN35N_0025 25178 25612 - acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0025 SN35N_0026 SN35N_0026 SN35N_0026 25614 26483 - DegV family protein DegV family protein [Lactobacillus plantarum ZJ316]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0026 SN35N_0027 SN35N_0027 SN35N_0027 26568 26990 - transcription regulator%2C MarR family MarR family%3B pfam12802%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0027 SN35N_0028 SN35N_0028 SN35N_0028 27475 29181 + fibronectin binding protein A domain of unknown function (DUF814)%3B pfam05670%3B~fibronectin binding protein A [Lactobacillus plantarum subsp. plantarum P-8]%3B~fibronectin-binding protein A N-terminus (FbpA)%3B pfam05833%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0028 SN35N_0029 SN35N_0029 SN35N_0029 29299 30060 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC-2 family transporter protein%3B cl17866%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0029 SN35N_0030 SN35N_0030 SN35N_0030 30073 30972 - ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum JDM1]%3B~ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0030 SN35N_0031 SN35N_0031 SN35N_0031 31366 31860 - ADP-ribose pyrophosphatase ADP-ribose pyrophosphatase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0031 SN35N_0032 SN35N_0032 SN35N_0032 31894 32049 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0032 SN35N_0033 SN35N_0033 SN35N_0033 32063 32788 + hypothetical protein hypothetical protein zj316_1780 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2087)%3B pfam09860 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0033 SN35N_0034 SN35N_0034 SN35N_0034 32792 33163 + hypothetical protein GIY-YIG domain of LuxR and ArsR family transcriptional regulators%2C and uncharacterized hypothetical proteins found in bacteria%3B cd10451%3B~GIY-YIG motif/motif A%3B~hypothetical protein zj316_1779 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0034 SN35N_0035 SN35N_0035 cat cat 33367 33831 + chloramphenicol O-acetyltransferase chloramphenicol O-acetyltransferase [Lactobacillus plantarum ZJ316]%3B~chloramphenicol O-acetyltransferase [defense mechanisms]%3B~chloramphenicol acetyltransferase%3B smart01059%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0035 SN35N_0036 SN35N_0036 SN35N_0036 34412 34807 + hypothetical protein domain of unknown function (DU1801)%3B cl17490%3B~hypothetical protein zj316_1774 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0036 SN35N_0037 SN35N_0037 pgm5 pgm5 34918 35517 - phosphoglycerate mutase catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoglycerate mutase[Lactobacillus plantarum JDM1] gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0037 SN35N_0038 SN35N_0038 pyrAB2 pyrAB2 35696 38257 - carbamoyl-phosphate synthase large subunit ATP-grasp domain%3B cl17255%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~carbamoyl-phosphate synthase large subunit [Lactobacillus plantarum ZJ316]%3B~carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B pfam02787%3B~carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B smart01096%3B~carbamoylphosphate synthase large subunit (split gene in MJ) [amino acid transport and metabolism / nucleotide transport and metabolism]%3B COG0458%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0038 SN35N_0039 SN35N_0039 pyr pyr 38254 39336 - carbamoyl phosphate synthase small subunit carbamoyl phosphate synthase small subunit [Lactobacillus plantarum subsp. plantarum P-8]%3B~carbamoyl phosphate synthase small subunit%3B reviewed%3B~carbamoyl-phosphate synthase small chain%2C CPSase domain%3B smart01097%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~small chain of the glutamine-dependent form of carbamoyl phosphate synthase%2C CPSase II%3B cd01744%3B~subunit interface [polypeptide binding] gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0039 SN35N_0040 SN35N_0040 pyrR2 pyrR2 39371 39895 - bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase bifunctional pyrimidine regulatory protein PyrR ura cil phosphoribosyltransferase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [nucleotide transport and metabolism]%3B COG2065%3B~regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes%2C also has been shown to have uracil phosphoribosyltransferase activity gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0040 SN35N_0041 SN35N_0041 rluD1 rluD1 40054 40977 - pseudouridine synthase RNA binding surface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pseudouridine synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~pseudouridine synthase%2C RsuA/RluD family%3B cd02869%3B~pseudouridylate synthases%2C 23S RNA-specific [translation%2C ribosomal structure and biogenesis]%3B COG0564 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0041 SN35N_0042 SN35N_0042 lspA lspA 40997 41446 - lipoprotein signal peptidase identified by MetaGeneAnnotator%3B putative%3B~lipoprotein signal peptidase [Lactobacillus plantarum ZJ316]%3B~lipoprotein signal peptidase%3B provisional%3B~organism:Lactobacillus plantarum ZJ316 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0042 SN35N_0043 SN35N_0043 SN35N_0043 41779 43437 - formate-tetrahydrofolate ligase cesium cation binding sites [ion binding]%3B~formate--tetrahydrofolate ligase%3B provisional%3B~formate-tetrahydrofolate ligase [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~potassium binding sites [ion binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0043 SN35N_0044 SN35N_0044 esbA esbA 43528 43914 - pore-forming protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pore-forming protein [Lactobacillus plantarum JDM1] gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0044 SN35N_0045 SN35N_0045 SN35N_0045 43949 44335 + RNase H-like family protein RNA/DNA hybrid binding site [nucleotide binding]%3B~RNAse HI family that includes archaeal RNase HI%3B cd09279%3B~RNase H-like family protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0045 SN35N_0046 SN35N_0046 SN35N_0046 44332 45438 - oxidoreductase%2C FAD-dependent NAD(P)-binding rossmann-like domain%3B cl17500%3B~glycine/D-amino acid oxidases (deaminating) [amino acid transport and metabolism]%3B COG0665%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase%2C FAD-dependent [Lactobacillus plantarum ZJ316] gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0046 SN35N_0047 SN35N_0047 SN35N_0047 45596 46108 - alpha/beta hydrolase alpha/beta hydrolase [Lactobacillus plantarum ZJ316]%3B~alpha/beta hydrolase family%3B pfam12697%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0047 SN35N_0048 SN35N_0048 SN35N_0048 46159 46353 - alpha/beta hydrolase alpha/beta hydrolase [Lactobacillus plantarum ZJ316]%3B~alpha/beta hydrolase family%3B pfam12697%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0048 SN35N_0049 SN35N_0049 SN35N_0049 46602 47681 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0049 SN35N_0050 SN35N_0050 SN35N_0050 47836 48513 - ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~ABC-type cobalt transport system%2C ATPase component [inorganic ion transport and metabolism]%3B COG1122%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cd00267%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0050 SN35N_0051 SN35N_0051 SN35N_0051 48513 49265 - transport protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0051 SN35N_0052 SN35N_0052 SN35N_0052 49445 49903 + acetyltransferase%2C GNAT family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0052 SN35N_0053 SN35N_0053 SN35N_0053 50022 50990 - bacteriocin immunity protein bacteriocin immunity protein[Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~microcin C7 self-immunity protein determines resistance to exogenous microcin C7%3B cd07062%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative dimer interface [polypeptide binding] gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0053 SN35N_0054 SN35N_0054 SN35N_0054 51162 52499 - lysin identified by MetaGeneAnnotator%3B putative%3B~lysin [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0054 SN35N_0055 SN35N_0055 SN35N_0055 52653 52898 - GNAT family acetyltransferase GNAT family acetyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0055 SN35N_0056 SN35N_0056 SN35N_0056 52819 53139 - GNAT family acetyltransferase GNAT family acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0056 SN35N_0057 SN35N_0057 SN35N_0057 53237 54316 - MccC family protein MccC family protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~microcin C7 self-immunity protein determines resistance to exogenous microcin C7%3B cd07062%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative dimer interface [polypeptide binding] gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0057 SN35N_0058 SN35N_0058 SN35N_0058 54470 55513 - glycosyltransferase glycosyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0058 SN35N_0059 SN35N_0059 SN35N_0059 55871 56278 - hypothetical protein hypothetical protein zj316_1753 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0059 SN35N_0060 SN35N_0060 SN35N_0060 56474 57226 + lipase/esterase esterase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~lipase/esterase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~prolyl oligopeptidase family%3B pfam00326 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0060 SN35N_0061 SN35N_0061 SN35N_0061 57355 58719 - transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0061 SN35N_0062 SN35N_0062 SN35N_0062 58982 59278 - transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0062 SN35N_0063 SN35N_0063 SN35N_0063 59316 60461 - RNA methyltransferase RNA methyltransferase [Listeria monocytogenes]%3B~THUMP domain associated with S-adenosylmethionine-dependent methyltransferases%3B cd11715%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~predicted N6-adenine-specific DNA methylase [DNA replication%2C recombination%2C and repair] gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0063 SN35N_0064 SN35N_0064 SN35N_0064 61021 61362 - cell division protein GpsB DivIVA domain%3B TIGR03544%3B~GpsB%3B guiding PBP1 shuttling%3B similar to DivIVA%3B~cell division protein GpsB [Lactobacillus plantarum JDM1]%3B~cell division protein GpsB%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0064 SN35N_0065 SN35N_0065 SN35N_0065 61437 62006 - UPF0398 protein UPF0398 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0065 SN35N_0066 SN35N_0066 recU recU 62121 62744 + recombination protein RecU holliday junction-specific endonuclease%3B reviewed%3B PRK02234%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~recombination protein RecU [Lactobacillus plantarum subsp. plantarum P-8] gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0066 SN35N_0067 SN35N_0067 SN35N_0067 62756 65059 + penicillin binding protein 1A identified by MetaGeneAnnotator%3B putative%3B~membrane carboxypeptidase (penicillin-binding protein) [cell envelope biogenesis%2C outer membrane]%3B COG0744%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~penicillin binding protein 1A [Lactobacillus plantarum subsp. plantarum P-8]%3B~penicillin binding protein transpeptidase domain%3B pfam00905%3B~transglycosylase%3B pfam00912 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0067 SN35N_0068 SN35N_0068 SN35N_0068 65244 66197 + ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum JDM1]%3B~ABC transporter signature motif%3B~ABC-type spermidine/putrescine transport systems%2C ATPase components [amino acid transport and metabolism]%3B COG3842%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the carbohydrate and solute transporters-like%3B cd03259%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0068 SN35N_0069 SN35N_0069 SN35N_0069 66210 67220 + ABC transporter substrate-binding protein 2-aminoethylphosphonate ABC transporter substrate-binding protein%3B provisional%3B~ABC transporter substrate-binding protein [Lactobacillus plantarum JDM1]%3B~ABC-type Fe3+ transport system%2C periplasmic component [inorganic ion transport and metabolism]%3B COG1840%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0069 SN35N_0070 SN35N_0070 SN35N_0070 67342 67533 + putative MarR family transcriptional regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Gordonia otitidis NBRC 100426 gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0070 SN35N_0071 SN35N_0071 SN35N_0071 67646 68878 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~ABC-ATPase subunit interface%3B~ABC-type Fe3+ transport system%2C permease component [inorganic ion transport and metabolism]%3B COG1178%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative PBP binding loops gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0071 SN35N_0072 SN35N_0072 SN35N_0072 69033 69533 - nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0072 SN35N_0073 SN35N_0073 SN35N_0073 69624 70481 - amino acid ABC transporter%2C substrate binding protein ABC-type metal ion transport system%2C periplasmic component/surface antigen [inorganic ion transport and metabolism]%3B COG1464%3B~NLPA lipoprotein%3B pfam03180%3B~amino acid ABC transporter%2C substrate binding protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0073 SN35N_0074 SN35N_0074 SN35N_0074 70500 71171 - D-methionine ABC transporter permease protein ABC-ATPase subunit interface%3B~D-methionine ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0074 SN35N_0075 SN35N_0075 metN1 metN1 71171 72238 - methionine import ATP-binding protein MetN 1 ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of methionine transporter%3B cd03258%3B~D-loop%3B~DL-methionine transporter ATP-binding subunit%3B provisional%3B PRK11153%3B~H-loop/switch region%3B~NIL domain%3B pfam09383%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~methionine import ATP-binding protein MetN 1 [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0075 SN35N_0076 SN35N_0076 dnaD dnaD 72874 73599 - DNA replication protein DnaD DNA replication protein DnaD [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative primosome component and related proteins [DNA replication%2C recombination%2C and repair]%3B COG3935%3B~replication initiation and membrane attachment%3B pfam07261 gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0076 SN35N_0077 SN35N_0077 asnC asnC 73677 74975 - asparaginyl-tRNA synthetase anticodon binding site%3B~asparaginyl-tRNA synthetase [Lactobacillus plantarum JDM1]%3B~asparaginyl-tRNA synthetase%3B validated%3B PRK03932%3B~catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B~dimer interface [polypeptide binding]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~replication protein A%2C class 2b aminoacyl-tRNA synthetases%2C and related proteins with oligonucleotide/oligosaccharide (OB) fold%3B cl09930 gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0077 SN35N_0078 SN35N_0078 aspAT aspAT 74993 76198 - aspartate aminotransferase aspartate aminotransferase [Lactobacillus plantarum ZJ316]%3B~aspartate aminotransferase%3B provisional%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0078 SN35N_0079 SN35N_0079 SN35N_0079 76215 76715 - extracellular protein extracellular protein [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0079 SN35N_0080 SN35N_0080 dinG dinG 76781 79585 - ATP-dependent helicase DinG ATP binding site [chemical binding]%3B~ATP-dependent helicase DinG [Lactobacillus plantarum ZJ316]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~DEDDh 3'-5' exonuclease domain family%3B cd06127%3B~bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon%3B validated%3B~catalytic site [active]%3B~helicase C-terminal domain%3B pfam13307%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding] gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0080 SN35N_0081 SN35N_0081 SN35N_0081 79914 80210 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain ATCC BAA-7 93 / NCIMB 8826 / WCFS1) gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0081 SN35N_0082 SN35N_0082 mvaK1 mvaK1 80439 81377 + mevalonate kinase GHMP kinases C terminal%3B pfam08544%3B~GHMP kinases N terminal domain%3B pfam00288%3B~identified by MetaGeneAnnotator%3B putative%3B~mevalonate kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~mevalonate kinase%3B TIGR00549%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0082 SN35N_0083 SN35N_0083 mvaD mvaD 81403 82380 + diphosphomevalonate decarboxylase diphosphomevalonate decarboxylase%3B~diphosphomevalonate decarboxylase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~mevalonate pyrophosphate decarboxylase [lipid metabolism]%3B COG3407%3B~organism:Lactobacillus plantarum ZJ316 gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0083 SN35N_0084 SN35N_0084 SN35N_0084 82431 83522 + phosphomevalonate kinase GHMP kinases N terminal domain%3B pfam00288%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phosphomevalonate kinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~phosphomevalonate kinase%2C ERG8-type%2C Gram-positive branch%3B TIGR01220 gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0084 SN35N_0085 SN35N_0085 idi1 idi1 83594 84640 + isopentenyl pyrophosphate isomerase FMN binding site [chemical binding]%3B~homodimer contacts [polypeptide binding]%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~isopentenyl pyrophosphate isomerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~isopentenyl pyrophosphate isomerase%3B provisional%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative active site [active]%3B~putative substrate binding site [chemical binding] gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0085 SN35N_0086 SN35N_0086 galM2 galM2 84796 85029 - aldose 1-epimerase aldose 1-epimerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~galactose mutarotase_like%3B cd09019%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0086 SN35N_0087 SN35N_0087 galM2 galM2 85098 85832 - aldose 1-epimerase aldose 1-epimerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~catalytic residues [active]%3B~galactose mutarotase_like%3B cd09019%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0087 SN35N_0088 SN35N_0088 map3 map3 85857 88103 - maltose phosphorylase glycosyl hydrolase family 65 central catalytic domain%3B pfam03632%3B~glycosyl hydrolase family 65%2C C-terminal domain%3B pfam03633%3B~glycosyl hydrolase family 65%2C N-terminal domain%3B pfam03636%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose phosphorylase [Lactobacillus plantarum JDM1]%3B~maltose phosphorylase%3B provisional%3B~organism:Lactobacillus plantarum JDM1 gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0088 SN35N_0089 SN35N_0089 SN35N_0089 88117 89463 - major facilitator superfamily permease COG0477GEPR%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily permease [Leuconostoc citreum KM20]%3B~major facilitator superfamily%3B pfam07690%3B~organism:Leuconostoc citreum KM20%3B~putative substrate translocation pore gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0089 SN35N_0090 SN35N_0090 SN35N_0090 89957 90829 - hypothetical protein double zinc ribbon%3B pfam12773%3B~hypothetical protein zj316_1720 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc-ribbon domain%3B pfam13248 gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0090 SN35N_0091 SN35N_0091 SN35N_0091 90998 92365 - 23S rRNA methylase 23S rRNA methylase [Lactobacillus plantarum WCFS1]%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pre-rRNA processing and ribosome biogenesis%3B pfam13636%3B~rRNA (cytosine-C(5)-)-methyltransferase RsmF%3B reviewed%3B PRK11933 gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0091 SN35N_0092 SN35N_0092 SN35N_0092 92513 93322 + hydrolase%2C HAD superfamily%2C Cof family hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted hydrolases of the HAD superfamily [general function prediction only]%3B COG0561 gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0092 SN35N_0093 SN35N_0093 SN35N_0093 93504 95003 - putative amino acid transporter C-terminus of AA_permease%3B pfam13906%3B~amino acid transporter%3B TIGR00909%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228%3B~putative amino acid transporter [Staphylococcus aureus subsp. aureus ST228] gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0093 SN35N_0094 SN35N_0094 SN35N_0094 95020 96369 - aminotransferase 4-aminobutyrate aminotransferase%3B provisional%3B~aminotransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~inhibitor-cofactor binding pocket%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0094 SN35N_0095 SN35N_0095 SN35N_0095 96808 97080 - lipoprotein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene94 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0095 SN35N_0096 SN35N_0096 SN35N_0096 97220 97519 - hypothetical protein hypothetical protein zj316_1714 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0096 SN35N_0097 SN35N_0097 SN35N_0097 97612 98388 - potassium/ion channel protein identified by MetaGeneAnnotator%3B putative%3B~ion channel%3B pfam07885%3B~organism:Lactobacillus plantarum ZJ316%3B~potassium/ion channel protein [Lactobacillus plantarum ZJ316] gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0097 SN35N_0098 SN35N_0098 SN35N_0098 98487 99404 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase%2C UbiA prenyltransferase family 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase%2C UbiA prenyltransferase family [Lactobacillus plantarum WCFS1]%3B~1%2C4-dihydroxy-2-naphthoate octaprenyltransferase%3B validated%3B~UbiA prenyltransferase family%3B pfam01040%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene97 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0098 SN35N_0099 SN35N_0099 SN35N_0099 99810 101135 - diaminopimelate decarboxylase catalytic residues [active]%3B~diaminopimelate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~diaminopimelate decarboxylase%3B TIGR01048%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~pyridoxal 5'-phosphate (PLP) binding site [chemical binding]%3B~substrate binding site [chemical binding]%3B~type III pyridoxal 5-phosphate (PLP)-dependent enzyme diaminopimelate decarboxylase%3B cd06828 gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0099 SN35N_0100 SN35N_0100 SN35N_0100 101208 101402 - 4-oxalocrotonate tautomerase 4-oxalocrotonate tautomerase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~dimer interface [polypeptide binding]%3B~hexamer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0100 SN35N_0101 SN35N_0101 pepD4 pepD4 101672 103111 + dipeptidase dipeptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peptidase family C69%3B pfam03577 gene gene100 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0101 SN35N_0102 SN35N_0102 SN35N_0102 103295 103561 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0102 SN35N_0103 SN35N_0103 SN35N_0103 103639 103860 + UPF0337 protein CsbD-like%3B cl17424%3B~UPF0337 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0103 SN35N_0104 SN35N_0104 SN35N_0104 103962 104669 + transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase [Lactobacillus plantarum ZJ316]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~transposase%3B cl17663 gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0104 SN35N_0105 SN35N_0105 SN35N_0105 104717 105553 + transposase HTH-like domain%3B pfam13276%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13683%3B~organism:Lactobacillus plantarum ZJ316%3B~putative transposase OrfB%3B reviewed%3B~transposase [Lactobacillus plantarum ZJ316] gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0105 SN35N_0106 SN35N_0106 SN35N_0106 105778 106044 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0106 SN35N_0107 SN35N_0107 SN35N_0107 106060 106179 - hypothetical protein hypothetical protein zj316_1703 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene106 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0107 SN35N_0108 SN35N_0108 SN35N_0108 106251 106499 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted membrane protein [function unknown] gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0108 SN35N_0109 SN35N_0109 SN35N_0109 106711 107607 + diacylglycerol kinase family protein diacylglycerol kinase catalytic domain%3B pfam00781%3B~diacylglycerol kinase family protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [lipid metabolism / general function prediction only]%3B COG1597 gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0109 SN35N_0110 SN35N_0110 SN35N_0110 107754 108119 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF805)%3B pfam05656 gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0110 SN35N_0111 SN35N_0111 SN35N_0111 108277 108735 + universal stress protein identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~universal stress protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0111 SN35N_0112 SN35N_0112 tspO tspO 108763 109248 + sensory protein TspO/MBR family%3B pfam03073%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sensory protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0112 SN35N_0113 SN35N_0113 SN35N_0113 109393 109641 - hypothetical protein hypothetical protein zj316_1695 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0113 SN35N_0114 SN35N_0114 SN35N_0114 110031 110312 + antibiotic biosynthesis monooxygenase subfamily antibiotic biosynthesis monooxygenase subfamily [La tobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~uncharacterized conserved protein [function unknown] gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0114 SN35N_0115 SN35N_0115 SN35N_0115 110687 111292 - adherence protein%2C chitin-binding domain protein adherence protein%2C chitin-binding domain protein [Lactobacillus plantarum ZJ316]%3B~chitin binding domain%3B pfam03067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0115 SN35N_0116 SN35N_0116 cfa1 cfa1 111540 112712 - cyclopropane-fatty-acyl-phospholipid synthase S-adenosylmethionine binding site [chemical binding]%3B~cyclopropane fatty acid synthase and related methyltransferases [cell envelope biogenesis%2C outer membrane]%3B COG2230%3B~cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0116 SN35N_0117 SN35N_0117 SN35N_0117 113045 113245 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0117 SN35N_0118 SN35N_0118 SN35N_0118 113266 114195 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0118 SN35N_0119 SN35N_0119 SN35N_0119 114633 115808 + transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase%2C mutator family%3B pfam00872 gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0119 SN35N_0120 SN35N_0120 SN35N_0120 117025 117585 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0120 SN35N_0121 SN35N_0121 SN35N_0121 117675 118169 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function with HXXEE motif%3B pfam13787 gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0121 SN35N_0122 SN35N_0122 SN35N_0122 118580 119446 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protease subunits%2C stomatin/prohibitin homologs [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0330%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0122 SN35N_0123 SN35N_0123 SN35N_0123 119607 119897 - drug resistance transport protein%2C EmrB/QacA subfamily drug resistance transport protein%2C major facilitator superfamily%2C EmrB/QacA subfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0123 SN35N_0124 SN35N_0124 SN35N_0124 119919 120215 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0124 SN35N_0125 SN35N_0125 SN35N_0125 120746 121561 - drug resistance transport protein%2C EmrB/QacA subfamily drug resistance transport protein%2C major facilitator superfamily%2C EmrB/QacA subfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316 gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0125 SN35N_0126 SN35N_0126 SN35N_0126 121668 122165 - drug resistance transport protein%2C EmrB/QacA subfamily drug resistance transport protein%2C major facilitator superfamily%2C EmrB/QacA subfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0126 SN35N_0127 SN35N_0127 SN35N_0127 122258 122809 + TetR family transcriptional regulator TetR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulator [transcription]%3B COG1309 gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0127 SN35N_0128 SN35N_0128 rsgA2 rsgA2 122870 123928 - putative ribosome biogenesis GTPase RsgA 2 GTP/Mg2+ binding site [chemical binding]%3B~GTPase RsgA%3B reviewed%3B~GTPase/Zn-binding domain interface [polypeptide binding]%3B~RNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative ribosome biogenesis GTPase RsgA 2 [Lactobacillus plantarum ZJ316]%3B~ribosomal interacting GTPase YjeQ/EngC%2C a circularly permuted subfamily of the Ras GTPases%3B cd01854 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0128 SN35N_0129 SN35N_0129 SN35N_0129 124193 124693 - acyl-CoA thioester hydrolase acyl-CoA thioester hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0129 SN35N_0130 SN35N_0130 SN35N_0130 124899 125786 - transcription regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0130 SN35N_0131 SN35N_0131 SN35N_0131 125913 126638 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF554)%3B pfam04474 gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0131 SN35N_0132 SN35N_0132 SN35N_0132 126833 127384 - phosphopantetheinyltransferase 4'-phosphopantetheinyl transferase superfamily%3B pfam01648%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphopantetheinyl transferase [coenzyme metabolism]%3B COG2091%3B~phosphopantetheinyltransferase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0132 SN35N_0133 SN35N_0133 SN35N_0133 127384 128142 - enoyl-(acyl carrier protein) reductase NAD binding site [chemical binding]%3B~catalyzes a key regulatory step in fatty acid biosynthesis%3B~enoyl acyl carrier protein (ACP) reductase (ENR)%2C divergent SDR%3B cd05372%3B~enoyl-(acyl carrier protein) reductase [Lactobacillus helveticus DPC 4571]%3B~enoyl-[acyl-carrier-protein]%3B COG0623%3B~homodimer interface [polypeptide binding]%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~substrate binding site [chemical binding] gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0133 SN35N_0134 SN35N_0134 accA2 accA2 128163 128933 - acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha acetyl-CoA carboxylase alpha subunit [lipid metabolism]%3B COG0825%3B~acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0134 SN35N_0135 SN35N_0135 accD2 accD2 128926 129768 - acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 2 acetyl-CoA carboxylase subunit beta%3B validated%3B~acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 2 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~malonate decarboxylase subunit beta%3B reviewed%3B cl17682%3B~organism:Lactobacillus plantarum ZJ316 gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0135 SN35N_0136 SN35N_0136 SN35N_0136 129737 131125 - biotin carboxylase ATP-grasp domain%3B cl03087%3B~acetyl-CoA carboxylase biotin carboxylase subunit%3B validated%3B~biotin carboxylase C-terminal domain%3B cl08365%3B~biotin carboxylase [Lactobacillus helveticus DPC 4571]%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0136 SN35N_0137 SN35N_0137 fabZ2 fabZ2 131140 131553 - (3R)-hydroxymyristoyl-ACP dehydratase (3R)-hydroxymyristoyl-ACP dehydratase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0137 SN35N_0138 SN35N_0138 accB2 accB2 131553 132014 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein acetyl-CoA carboxylase biotin carboxyl carrier protein subunit%3B validated%3B~acetyl-CoA carboxylase%2C biotin carboxyl carrier protein [Lactobacillus plantarum WCFS1]%3B~biotinylation site [posttranslational modification]%3B~carboxyltransferase (CT) interaction site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0138 SN35N_0139 SN35N_0139 SN35N_0139 132011 133243 - 3-oxoacyl-(acyl-carrier-protein) synthase 3-oxoacyl-(acyl-carrier-protein) synthase [Lactobacillus helveticus DPC 4571]%3B~beta-ketoacyl-acyl-carrier-protein synthase II%3B TIGR03150%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0139 SN35N_0140 SN35N_0140 fabG1 fabG1 133262 133984 - 3-oxoacyl-[acyl-carrier protein] reductase 3-oxoacyl-(acyl-carrier-protein) reductase%3B TIGR01830%3B~3-oxoacyl-[acyl-carrier protein] reductase [Lactobacillus plantarum ZJ316]%3B~NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0140 SN35N_0141 SN35N_0141 fabD fabD 133977 134909 - [acyl-carrier protein] S-malonyltransferase (acyl-carrier-protein) S-malonyltransferase [lipid metabolism]%3B COG0331%3B~[acyl-carrier protein] S-malonyltransferase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~malonyl CoA-acyl carrier protein transacylase%3B TIGR00128%3B~organism:Lactobacillus plantarum WCFS1 gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0141 SN35N_0142 SN35N_0142 SN35N_0142 134913 135161 - acyl carrier protein acyl carrier [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~phosphopantetheine attachment site%3B cl09936 gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0142 SN35N_0143 SN35N_0143 fabH2 fabH2 135218 136204 - 3-oxoacyl-ACP synthase 3-oxoacyl-(acyl carrier protein) synthase III%3B reviewed%3B~3-oxoacyl-ACP synthase [Lactobacillus plantarum WCFS1]%3B~CoA binding pocket [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0143 SN35N_0144 SN35N_0144 SN35N_0144 136279 136722 - carrier protein carrier protein [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0144 SN35N_0145 SN35N_0145 SN35N_0145 137184 138170 - AraC family transcriptional regulator AraC family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~AraC-type DNA-binding domain-containing proteins [transcription]%3B COG2207%3B~arabinose-binding domain of AraC transcription regulator%2C N-term%3B pfam12625%3B~bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0145 SN35N_0146 SN35N_0146 SN35N_0146 138185 138997 - short chain dehydrogenase 17beta hydroxysteroid dehydrogenase-like%2C classical (c) SDRs%3B cd05374%3B~NADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~short chain dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8]%3B~short chain dehydrogenase%3B validated%3B~steroid binding site gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0146 SN35N_0147 SN35N_0147 SN35N_0147 139286 139648 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF1648)%3B pfam07853 gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0147 SN35N_0148 SN35N_0148 SN35N_0148 139955 140998 - zinc-containing alcohol dehydrogenase NAD(P) binding site [chemical binding]%3B~catalytic Zn binding site [ion binding]%3B~formaldehyde dehydrogenase (FDH)-like%3B cd08287%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B%3B~structural Zn binding site [ion binding]%3B~threonine dehydrogenase and related Zn-dependent dehydrogenases [amino acid transport and metabolism / general function prediction only]%3B COG1063%3B~zinc-containing alcohol dehydrogenase [Streptococcus pneumoniae 670-6B] gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0148 SN35N_0149 SN35N_0149 SN35N_0149 141287 142420 - aminohydrolase M20 peptidase aminoacyclase-1 YxeP-like proteins%2C including YxeP%2C YtnL%2C YjiB and HipO2%3B cd05669%3B~aminohydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metal-dependent amidase/aminoacylase/carboxypeptidase [general function prediction only]%3B COG1473%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0149 SN35N_0150 SN35N_0150 SN35N_0150 142433 143671 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0150 SN35N_0151 SN35N_0151 SN35N_0151 143880 144380 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0151 SN35N_0152 SN35N_0152 SN35N_0152 144595 145545 - NADPH:quinone reductase NADP binding site [chemical binding]%3B~NADPH:quinone reductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~quinone oxidoreductase (QOR)%3B cd05286 gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0152 SN35N_0153 SN35N_0153 SN35N_0153 145546 146085 - isochorismatase catalytic triad [active]%3B~conserved cis-peptide bond%3B~identified by MetaGeneAnnotator%3B putative%3B~isochorismatase [Lactobacillus plantarum 16]%3B~isochorismatase family%3B pfam00857%3B~organism:Lactobacillus plantarum 16 gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0153 SN35N_0154 SN35N_0154 trpA trpA 146246 147040 - tryptophan synthase alpha chain catalytic residues [active]%3B~heterodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding site [chemical binding]%3B~tryptophan synthase alpha chain [Lactobacillus plantarum subsp. plantarum P-8]%3B~tryptophan synthase alpha subunit%3B provisional%3B CHL00200 gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0154 SN35N_0155 SN35N_0155 SN35N_0155 147033 148232 - tryptophan synthase subunit beta catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~tryptophan synthase subunit beta [Lactobacillus rhamnosus GG]%3B~tryptophan synthase%2C beta subunit%3B TIGR00263 gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0155 SN35N_0156 SN35N_0156 trpF trpF 148234 148860 - N-(5'-phosphoribosyl)anthranilate isomerase N-(5'-phosphoribosyl)anthranilate isomerase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0156 SN35N_0157 SN35N_0157 trpC trpC 148857 149639 - indole-3-glycerol-phosphate synthase identified by MetaGeneAnnotator%3B putative%3B~indole-3-glycerol-phosphate synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphate binding site [ion binding]%3B~product (indole) binding pocket [chemical binding]%3B~ribulose/triose binding site [chemical binding]%3B~substrate (anthranilate) binding pocket [chemical binding] gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0157 SN35N_0158 SN35N_0158 trpD trpD 149636 150655 - anthranilate phosphoribosyltransferase anthranilate phosphoribosyltransferase [Lactobacillus plantarum WCFS1]%3B~anthranilate phosphoribosyltransferase%3B provisional%3B PRK00188%3B~glycosyl transferase family%2C a/b domain%3B pfam00591%3B~glycosyl transferase family%2C helical bundle domain%3B pfam02885%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0158 SN35N_0159 SN35N_0159 trpG trpG 150680 151255 - anthranilate synthase%2C component II anthranilate synthase%2C component II [Lactobacillus plantarum subsp. plantarum P-8]%3B~catalytic triad [active]%3B~glutamine amidotransferase class-I%3B pfam00117%3B~glutamine binding [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~type 1 glutamine amidotransferase (GATase1) domain found in anthranilate synthase%3B cd01743 gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0159 SN35N_0160 SN35N_0160 SN35N_0160 151239 152675 - anthranilate synthase%2C component I anthranilate synthase component I%2C N terminal region%3B pfam04715%3B~anthranilate synthase%2C component I [Lactobacillus plantarum 16]%3B~anthranilate/para-aminobenzoate synthases component I [amino acid transport and metabolism / coenzyme metabolism]%3B COG0147%3B~chorismate binding enzyme%3B pfam00425%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0160 SN35N_0161 SN35N_0161 SN35N_0161 153148 154743 - ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0161 SN35N_0162 SN35N_0162 SN35N_0162 154736 155500 - ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC transporter signature motif%3B~ABC-type Na+ transport system%2C ATPase component [energy production and conversion / inorganic ion transport and metabolism]%3B COG4555%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0162 SN35N_0163 SN35N_0163 SN35N_0163 155998 156294 - alcohol dehydrogenase alcohol dehydrogenase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0163 SN35N_0164 SN35N_0164 SN35N_0164 156490 163143 - cell surface protein precursor KxYKxGKxW signal peptide%3B TIGR03715%3B~MucBP domain%3B pfam06458%3B~cell surface protein precursor [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0164 SN35N_0165 SN35N_0165 SN35N_0165 163771 164091 - hypothetical protein enterocin A immunity%3B pfam08951%3B~hypothetical protein zj316_1635 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0165 SN35N_0166 SN35N_0166 SN35N_0166 164527 164883 - 50S ribosomal protein L19 50S ribosomal protein L19 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L19%3B provisional%3B PRK05338%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0166 SN35N_0167 SN35N_0167 SN35N_0167 165041 165781 - tRNA (guanine-N1)-methyltransferase derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~tRNA (guanine-N(1)-)-methyltransferase%3B reviewed%3B PRK00026%3B~tRNA (guanine-N1)-methyltransferase [Listeria monocytogenes] gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0167 SN35N_0168 SN35N_0168 rimM rimM 165781 166305 - 16S rRNA processing protein 16S rRNA processing protein [Lactobacillus plantarum WCFS1]%3B~16S rRNA-processing protein RimM%3B provisional%3B PRK00122%3B~PRC-barrel domain%3B pfam05239%3B~RimM N-terminal domain%3B pfam01782%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0168 SN35N_0169 SN35N_0169 SN35N_0169 166466 166723 - UPF0109 protein G-X-X-G motif%3B~KH domain%3B pfam13083%3B~UPF0109 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted RNA-binding protein (contains KH domain) [general function prediction only] gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0169 SN35N_0170 SN35N_0170 SN35N_0170 166741 167013 - 30S ribosomal protein S16 30S ribosomal protein S16 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S16%3B reviewed%3B PRK00040%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0170 SN35N_0171 SN35N_0171 SN35N_0171 167110 168564 - signal recognition particle protein GTP binding site [chemical binding]%3B~P loop%3B~SRP54-type protein%2C helical bundle domain%3B smart00963%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~signal peptide binding domain%3B pfam02978%3B~signal recognition particle protein [Lactobacillus rhamnosus GG]%3B~signal recognition particle protein%3B provisional%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0171 SN35N_0172 SN35N_0172 SN35N_0172 168587 168934 - UPF0122 protein UPF0122 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA-binding protein%3B validated%3B~putative helix-turn-helix protein%2C YlxM / p13 like%3B pfam04297 gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0172 SN35N_0173 SN35N_0173 SN35N_0173 169112 170650 - signal recognition particle receptor FtsY GTP binding site [chemical binding]%3B~P loop%3B~SRP54-type protein%2C helical bundle domain%3B pfam02881%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~signal recognition particle receptor FtsY [Lactobacillus plantarum 16]%3B~signal recognition particle-docking protein FtsY%3B provisional gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0173 SN35N_0174 SN35N_0174 smc smc 170669 174226 - cell division protein Smc ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of barmotin%2C a member of the SMC protein family%3B cd03278%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~SMC proteins Flexible Hinge domain%3B smart00968%3B~cell division protein Smc [Lactobacillus plantarum JDM1]%3B~chromosome segregation protein SMC%2C common bacterial type%3B TIGR02168%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0174 SN35N_0175 SN35N_0175 rnc rnc 174257 174952 - ribonuclease 3 dimerization interface [polypeptide binding]%3B~dsRNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~ribonuclease 3 [Lactobacillus plantarum ZJ316]%3B~ribonuclease III%3B reviewed%3B PRK00102 gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0175 SN35N_0176 SN35N_0176 acpA1 acpA1 175369 175614 - acyl carrier protein acyl carrier protein [Lactobacillus plantarum ZJ316]%3B~acyl carrier protein%3B provisional%3B PRK00982%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0176 SN35N_0177 SN35N_0177 plsX plsX 175653 176699 - phosphate acyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphate acyltransferase [Lactobacillus plantarum ZJ316]%3B~putative phosphate acyltransferase%3B provisional gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0177 SN35N_0178 SN35N_0178 recG recG 176741 178780 - ATP-dependent DNA helicase RecG ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent DNA helicase RecG [Lactobacillus plantarum ZJ316]%3B~ATP-dependent DNA helicase RecG%3B provisional%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~generic binding surface II%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative Mg++ binding site [ion binding]%3B~ssDNA binding site gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0178 SN35N_0179 SN35N_0179 SN35N_0179 178923 180629 - glycerone kinase DAK2 domain fusion protein YloV%3B TIGR03599%3B~DAK2 domain%3B pfam02734%3B~glycerone kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0179 SN35N_0180 SN35N_0180 SN35N_0180 180666 181028 - alkaline shock protein Asp23 family%3B cl00574%3B~COG1302 protein conserved in bacteria%3B~alkaline shock protein [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0180 SN35N_0181 SN35N_0181 rpmB rpmB 181264 181449 + 50S ribosomal protein L28 50S ribosomal protein L28 [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~required for 70S ribosome assembly%3B~ribosomal L28 family%3B cl00367 gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0181 SN35N_0182 SN35N_0182 tpk tpk 181807 182466 - thiamin pyrophosphokinase dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~thiamin pyrophosphokinase [Lactobacillus plantarum ZJ316]%3B~thiamine binding site [chemical binding]%3B~thiamine pyrophosphokinase%3B TIGR01378%3B~thiamine pyrophosphokinase%3B cd07995 gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0182 SN35N_0183 SN35N_0183 rpe rpe 182466 183119 - ribulose-phosphate 3-epimerase hexamer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~pentose-5-phosphate-3-epimerase [carbohydrate transport and metabolism]%3B COG0036%3B~ribulose-phosphate 3-epimerase [Lactobacillus plantarum WCFS1]%3B~substrate binding site [chemical binding] gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0183 SN35N_0184 SN35N_0184 rsgA1 rsgA1 183129 184025 - putative ribosome biogenesis GTPase RsgA 1 G1 box%3B~G2 box%3B~G3 box%3B~G4 box%3B~G5 box%3B~GTP/Mg2+ binding site [chemical binding]%3B~GTPase RsgA%3B reviewed%3B~GTPase/Zn-binding domain interface [polypeptide binding]%3B~RNA binding site [nucleotide binding]%3B~Switch I region%3B~Switch II region%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative ribosome biogenesis GTPase RsgA 1 [Lactobacillus plantarum ZJ316]%3B~ribosomal interacting GTPase YjeQ/EngC%2C a circularly permuted subfamily of the Ras GTPases%3B cd01854 gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0184 SN35N_0185 SN35N_0185 pkn1 pkn1 184110 186134 - serine/threonine protein kinase ATP binding site [chemical binding]%3B~activation loop (A-loop)%3B~catalytic domain of protein kinases%3B cd00180%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~serine/threonine protein kinase [Lactobacillus plantarum ZJ316]%3B~serine/threonine protein kinases%2C catalytic domain%3B smart00220%3B~substrate binding site [chemical binding]%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0185 SN35N_0186 SN35N_0186 pppL pppL 186131 186877 - serine/threonine specific protein phosphatase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~serine/threonine specific protein phosphatase [Lactobacillus plantarum ZJ316] gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0186 SN35N_0187 SN35N_0187 sunL sunL 186895 188238 - rRNA methylase 16S rRNA methyltransferase B%3B provisional%3B~NusB family%3B pfam01029%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~rRNA methylase[Lactobacillus plantarum JDM1] gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0187 SN35N_0188 SN35N_0188 SN35N_0188 188235 189188 - methionyl-tRNA formyltransferase C-terminal domain of formyltransferase and other enzymes%3B cd08704%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~methionyl-tRNA formyltransferase [Lactobacillus rhamnosus GG]%3B~methionyl-tRNA formyltransferase%2C N-terminal hydrolase domain%3B cd08646%3B~methionyl-tRNA formyltransferase%3B reviewed%3B PRK00005%3B~organism:Lactobacillus rhamnosus GG%3B~putative active site [active]%3B~putative cosubstrate binding site%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~substrate binding site [chemical binding] gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0188 SN35N_0189 SN35N_0189 priA priA 189212 191629 - primosomal protein N' ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum JDM1%3B~primosomal protein N' (replication factor Y) - superfamily II helicase [DNA replication%2C recombination%2C and repair]%3B COG1198%3B~primosomal protein N' [Lactobacillus plantarum JDM1]%3B~putative Mg++ binding site [ion binding] gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0189 SN35N_0190 SN35N_0190 dfp dfp 191652 192878 - pantothenate metabolism flavoprotein Dfp DNA / pantothenate metabolism flavoprotein%3B pfam04127%3B~bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase%3B validated%3B~flavoprotein%3B pfam02441%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pantothenate metabolism flavoprotein Dfp [Lactobacillus plantarum subsp. plantarum P-8] gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0190 SN35N_0191 SN35N_0191 SN35N_0191 193042 193254 - DNA-directed RNA polymerase subunit omega DNA-directed RNA polymerase subunit omega [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~RNA polymerase Rpb6%3B cl14651%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0191 SN35N_0192 SN35N_0192 SN35N_0192 193251 193871 - guanylate kinase G-X2-G-X-G-K%3B~catalytic site [active]%3B~guanylate kinase [Lactobacillus rhamnosus GG]%3B~guanylate kinase [nucleotide transport and metabolism]%3B COG0194%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0192 SN35N_0193 SN35N_0193 SN35N_0193 194064 194411 + hypothetical protein hypothetical protein zj316_1605 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0193 SN35N_0194 SN35N_0194 SN35N_0194 194605 195258 - glycine betaine/carnitine/choline ABC transporter ABC-ATPase subunit interface%3B~dimer interface [polypeptide binding]%3B~glycine betaine/carnitine/choline ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative PBP binding loops gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0194 SN35N_0195 SN35N_0195 opuC opuC 195258 196193 - glycine betaine/carnitine/choline ABC transporter%2C substrate binding protein ABC-type proline/glycine betaine transport systems%2C periplasmic components [amino acid transport and metabolism]%3B cl17891%3B~glycine betaine/carnitine/choline ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [cell envelope biogenesis%2C outer membrane]%3B COG1732 gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0195 SN35N_0196 SN35N_0196 SN35N_0196 196206 196835 - choline ABC transporter permease ABC-ATPase subunit interface%3B~choline ABC transporter permease [Listeria monocytogenes]%3B~conserved gate region%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative PBP binding loops gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0196 SN35N_0197 SN35N_0197 SN35N_0197 196832 198016 - glycine/betaine ABC transporter ATP-binding protein ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the osmoprotectant transporter%3B cd03295%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~glycine betaine/L-proline transport ATP binding subunit%3B TIGR01186%3B~glycine/betaine ABC transporter ATP-binding protein [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~walker A/P-loop%3B~walker B gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0197 SN35N_0198 SN35N_0198 recN recN 198394 200088 - DNA repair protein RecN ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of RecN%3B cd03241%3B~ATPase involved in DNA repair [DNA replication%2C recombination%2C and repair]%3B COG0497%3B~D-loop%3B~DNA repair protein RecN [Lactobacillus plantarum ZJ316]%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0198 SN35N_0199 SN35N_0199 argR2 argR2 200191 200649 - arginine repressor arginine repressor [Lactobacillus plantarum ZJ316]%3B~arginine repressor%2C C-terminal domain%3B pfam02863%3B~arginine repressor%2C DNA binding domain%3B pfam01316%3B~arginine repressor%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0199 SN35N_0200 SN35N_0200 SN35N_0200 200733 201551 - rRNA methylase FtsJ-like methyltransferase%3B pfam01728%3B~RNA binding surface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted rRNA methylase [translation%2C ribosomal structure and biogenesis]%3B~rRNA methylase [Lactobacillus plantarum ZJ316] gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0200 SN35N_0201 SN35N_0201 ispA ispA 201566 202492 - geranyltranstransferase active site lid residues [active]%3B~aspartate-rich region 1%3B~aspartate-rich region 2%3B~catalytic residues [active]%3B~chain length determination region%3B~geranylgeranyl pyrophosphate synthase [coenzyme metabolism]%3B COG0142%3B~geranyltranstransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding]%3B~substrate-Mg2+ binding site%3B~trans-isoprenyl diphosphate synthases%2C head-to-tail%3B cd00685 gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0201 SN35N_0202 SN35N_0202 xseB xseB 202449 202679 - exodeoxyribonuclease 7 small subunit exodeoxyribonuclease 7 small subunit [Lactobacillus plantarum ZJ316]%3B~exodeoxyribonuclease VII small subunit%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0202 SN35N_0203 SN35N_0203 xseA xseA 202679 204022 - exodeoxyribonuclease VII large subunit bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides%3B~exodeoxyribonuclease VII large subunit [Lactobacillus plantarum JDM1]%3B~exodeoxyribonuclease VII large subunit%3B reviewed%3B PRK00286%3B~generic binding surface I%3B~generic binding surface II%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0203 SN35N_0204 SN35N_0204 folD folD 204015 204875 - bifunctional protein FolD NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase%3B cd01080%3B~NADP binding site [chemical binding]%3B~bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase%3B provisional%3B~bifunctional protein FolD [Lactobacillus plantarum ZJ316]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tetrahydrofolate dehydrogenase/cyclohydrolase%2C catalytic domain%3B pfam00763 gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0204 SN35N_0205 SN35N_0205 nusB nusB 205021 205440 - N utilization substance protein B-like protein N utilization substance protein B-like protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative RNA binding site [nucleotide binding]%3B~transcription antitermination protein NusB%3B reviewed%3B PRK00202 gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0205 SN35N_0206 SN35N_0206 SN35N_0206 205437 205895 - general stress protein%2C Gls24 family Asp23 family%3B pfam03780%3B~general stress protein%2C Gls24 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0206 SN35N_0207 SN35N_0207 SN35N_0207 205945 206502 - elongation factor P RNA binding site [nucleotide binding]%3B~elongation factor P (EF-P) KOW-like domain%3B pfam08207%3B~elongation factor P [Listeria monocytogenes]%3B~elongation factor P%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~organism:Listeria monocytogenes gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0207 SN35N_0208 SN35N_0208 pepP pepP 206573 207625 - Xaa-Pro aminopeptidase Xaa-Pro aminopeptidase [amino acid transport and metabolism]%3B COG0006%3B~Xaa-Pro aminopeptidase[Lactobacillus plantarum JDM1]%3B~creatinase/prolidase N-terminal domain%3B pfam01321%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0208 SN35N_0209 SN35N_0209 SN35N_0209 207819 208097 - 50S ribosomal protein L27 50S ribosomal protein L27 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L27%3B validated%3B PRK05435%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0209 SN35N_0210 SN35N_0210 SN35N_0210 208122 208457 - ribosomal protein%2C DUF464 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF464)%3B pfam04327%3B~ribosomal protein%2C DUF464 family [Lactobacillus plantarum ZJ316] gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0210 SN35N_0211 SN35N_0211 rplU rplU 208479 208787 - 50S ribosomal protein L21 50S ribosomal protein L21 [Streptococcus agalactiae NEM316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus agalactiae NEM316%3B~ribosomal prokaryotic L21 protein%3B cl00382 gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0211 SN35N_0212 SN35N_0212 SN35N_0212 208945 209574 - transcription regulator%2C TetR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator C-terminal region%3B pfam14278%3B~transcriptional regulator [transcription]%3B COG1309 gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0212 SN35N_0213 SN35N_0213 SN35N_0213 209978 210133 + hypothetical protein hypothetical protein zj316_1585 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0213 SN35N_0214 SN35N_0214 SN35N_0214 210224 210349 - hypothetical protein hypothetical protein zj316_1584 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0214 SN35N_0215 SN35N_0215 SN35N_0215 211614 211814 + hypothetical protein hypothetical protein zj316_1583 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0215 SN35N_0216 SN35N_0216 SN35N_0216 211872 212210 + hypothetical protein hypothetical protein zj316_1582 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0216 SN35N_0217 SN35N_0217 SN35N_0217 212257 212796 - 2-deoxyuridine 5-triphosphate nucleotidohydrolase 2-deoxyuridine 5-triphosphate nucleotidohydrolase [Lactobacillus plantarum WCFS1]%3B~dUTPase%3B pfam08761%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nucleoside triphosphate pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in dimeric 2-deoxyuridine 5'-triphosphate nucleotidohydrolase and similar proteins%3B cd11527%3B~organism:Lactobacillus plantarum WCFS1 gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0217 SN35N_0218 SN35N_0218 SN35N_0218 212813 213769 - hypothetical protein hypothetical protein zj316_1580 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0218 SN35N_0219 SN35N_0219 SN35N_0219 213759 214646 - hypothetical protein hypothetical protein zj316_1579 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~small-conductance mechanosensitive channel [cell envelope biogenesis%2C outer membrane] gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0219 SN35N_0220 SN35N_0220 SN35N_0220 214829 216175 - glutamine synthetase glutamine synthetase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~glutamine synthetase%2C beta-Grasp domain%3B pfam03951%3B~glutamine synthetase%2C catalytic domain%3B pfam00120%3B~glutamine synthetase%2C type I%3B TIGR00653%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0220 SN35N_0221 SN35N_0221 glnR1 glnR1 216219 216599 - HTH-type transcriptional regulator GlnR DNA binding residues [nucleotide binding]%3B~HTH-type transcriptional regulator GlnR [Carnobacterium sp. 17- 4]%3B~collected in autumn%3B~helix-turn-helix DNA binding domain of GlnR-like transcription regulators%3B cd01105%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Carnobacterium sp. 17-4%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding] gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0221 SN35N_0222 SN35N_0222 miaA miaA 216711 217646 - tRNA isopentenylpyrophosphate transferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~tRNA delta(2)-isopentenylpyrophosphate transferase [translation%2C ribosomal structure and biogenesis]%3B COG0324%3B~tRNA delta(2)-isopentenylpyrophosphate transferase%3B reviewed%3B PRK00091%3B~tRNA isopentenylpyrophosphate transferase [Lactobacillus plantarum WCFS1] gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0222 SN35N_0223 SN35N_0223 glpQ2 glpQ2 217651 218385 - glycerophosphodiester phosphodiesterase catalytic site [active]%3B~dimer interface [polypeptide binding]%3B~glycerophosphodiester phosphodiesterase [Lactobacillus plantarum ZJ316]%3B~glycerophosphodiester phosphodiesterase domain of thermoanaerobacter tengcongensis and similar proteins%3B cd08563%3B~glycerophosphoryl diester phosphodiesterase [energy production and conversion]%3B COG0584%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0223 SN35N_0224 SN35N_0224 SN35N_0224 218485 218661 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0224 SN35N_0225 SN35N_0225 SN35N_0225 218711 219124 - rhodanese family protein active site residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rhodanese family protein [Lactobacillus plantarum ZJ316] gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0225 SN35N_0226 SN35N_0226 pepE pepE 219352 219987 - dipeptidase active site nucleophile [active]%3B~catalytic triad [active]%3B~dipeptidase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins%3B cd03129 gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0226 SN35N_0227 SN35N_0227 SN35N_0227 220258 221220 - glucokinase FGGY family of carbohydrate kinases%2C N-terminal domain%3B cl09121%3B~ROK family protein (putative glucokinase)%3B TIGR00744%3B~glucokinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0227 SN35N_0228 SN35N_0228 SN35N_0228 221238 221459 - hypothetical protein bacterial protein of unknown function (DUF910)%3B pfam06014%3B~hypothetical protein zj316_1570 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0228 SN35N_0229 SN35N_0229 SN35N_0229 221478 222161 - membrane-bound protease%2C rhomboid family identified by MetaGeneAnnotator%3B putative%3B~membrane-bound protease%2C rhomboid family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~rhomboid family%3B pfam01694 gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0229 SN35N_0230 SN35N_0230 fthC fthC 222148 222714 - 5-formyltetrahydrofolate cyclo-ligase 5%2C10-methenyltetrahydrofolate synthetase%3B TIGR02727%3B~5-formyltetrahydrofolate cyclo-ligase [Lactobacillus plantarum subsp. plantarum P-8]%3B~5-formyltetrahydrofolate cyclo-ligase family%3B pfam01812%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0230 SN35N_0231 SN35N_0231 rpmG2 rpmG2 222862 223011 - 50S ribosomal protein L33 50S ribosomal protein L33 [Bacillus licheniformis DSM 13 %3D ATCC 14580]%3B~50S ribosomal protein L33%3B validated%3B PRK00595%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Bacillus licheniformis DSM 13 %3D ATCC 14580 gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0231 SN35N_0232 SN35N_0232 SN35N_0232 223137 225173 - penicillin binding protein 2B cell division protein FtsI/penicillin-binding protein 2 [cell envelope biogenesis%2C outer membrane]%3B COG0768%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~penicillin binding protein 2B [Lactobacillus plantarum subsp. plantarum ST-III]%3B~penicillin binding protein transpeptidase domain%3B pfam00905%3B~penicillin-binding protein dimerisation domain%3B pfam03717 gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0232 SN35N_0233 SN35N_0233 SN35N_0233 225373 228018 + integral membrane protein bacterial membrane protein YfhO%3B pfam09586%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0233 SN35N_0234 SN35N_0234 SN35N_0234 228135 228437 - hypothetical protein hypothetical protein zj316_1565 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~iron-sulphur cluster biosynthesis%3B cl00400%3B~organism:Lactobacillus plantarum ZJ316 gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0234 SN35N_0235 SN35N_0235 SN35N_0235 228622 229077 + transcription regulator%2C LytTr family LytTr DNA-binding domain%3B pfam04397%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C LytTr family [Lactobacillus plantarum ZJ316] gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0235 SN35N_0236 SN35N_0236 SN35N_0236 229078 229800 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0236 SN35N_0237 SN35N_0237 SN35N_0237 230864 231346 - transcription elongation factor GreA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~transcription elongation factor GreA [Lactobacillus rhamnosus GG]%3B~transcription elongation factor GreA%3B reviewed%3B PRK00226%3B~transcription elongation factor%2C GreA/GreB%2C C-term%3B pfam01272%3B~transcription elongation factor%2C N-terminal%3B pfam03449 gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0237 SN35N_0238 SN35N_0238 SN35N_0238 231457 232086 - uridine kinase ATP-binding site [chemical binding]%3B~Uridine kinase [nucleotide transport and metabolism]%3B COG0572%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~pyrimidine base specificity%3B~sugar specificity%3B~uridine kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0238 SN35N_0239 SN35N_0239 SN35N_0239 232105 233295 - aminodeoxychorismate lyase YceG-like family%3B pfam02618%3B~aminodeoxychorismate lyase [Lactobacillus plantarum ZJ316]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~proteins similar to Escherichia coli yceG%3B cd08010 gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0239 SN35N_0240 SN35N_0240 pheT pheT 233457 235874 - phenylalanyl-tRNA synthetase subunit beta B3/4 domain%3B pfam03483%3B~dimer interface [polypeptide binding]%3B~ferredoxin-fold anticodon binding domain%3B pfam03147%3B~identified by MetaGeneAnnotator%3B putative%3B~motif 1%3B~motif 2%3B~motif 3%3B~organism:Lactobacillus plantarum WCFS1%3B~phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum WCFS1]%3B~phenylalanyl-tRNA synthetase subunit beta%3B reviewed%3B PRK00629%3B~putative tRNA-binding site [nucleotide binding]%3B~tRNA synthetase B5 domain%3B smart00874 gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0240 SN35N_0241 SN35N_0241 SN35N_0241 235883 236929 - phenylalanyl-tRNA synthetase subunit alpha aminoacyl tRNA synthetase class II%2C N-terminal domain%3B pfam02912%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif 1%3B~motif 2%3B~motif 3%3B~organism:Lactobacillus rhamnosus GG%3B~phenylalanyl-tRNA synthetase subunit alpha [Lactobacillus rhamnosus GG]%3B~phenylalanyl-tRNA synthetase subunit alpha%3B validated%3B PRK00488%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0241 SN35N_0242 SN35N_0242 SN35N_0242 237257 237616 - transcription regulator%2C MarR family HxlR-like helix-turn-helix%3B pfam01638%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0242 SN35N_0243 SN35N_0243 SN35N_0243 237639 238148 - metal-dependent phosphohydrolase%2C HD family identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cl17215%3B~metal-dependent phosphohydrolase%2C HD family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene242 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0243 SN35N_0244 SN35N_0244 SN35N_0244 238249 239016 - rRNA methylase RNA 2'-O ribose methyltransferase substrate binding%3B smart00967%3B~SpoU rRNA methylase family%3B pfam00588%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~rRNA methylase [Lactobacillus plantarum subsp. plantarum P-8]%3B~rRNA methylases [translation%2C ribosomal structure and biogenesis]%3B COG0566 gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0244 SN35N_0245 SN35N_0245 acyP acyP 239248 239520 + acylphosphatase acylphosphatase [Lactobacillus plantarum ZJ316]%3B~acylphosphatases [energy production and conversion]%3B COG1254%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0245 SN35N_0246 SN35N_0246 yidC1 yidC1 239584 240507 + membrane protein insertase YidC 1 OxaA-like protein precursor%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein insertase YidC 1 [Lactobacillus plantarum ZJ316]%3B~membrane protein insertase%2C YidC/Oxa1 family%2C C-terminal domain%3B TIGR03592%3B~organism:Lactobacillus plantarum ZJ316 gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0246 SN35N_0247 SN35N_0247 SN35N_0247 240654 241232 - integral membrane protein SdpI/YhfL protein family%3B pfam13630%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0247 SN35N_0248 SN35N_0248 sbcD sbcD 241596 242777 + exonuclease SbcD DNA binding site [nucleotide binding]%3B~Mre11 nuclease%2C N-terminal metallophosphatase domain%3B cd00840%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~exonuclease SbcD [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~type 5 capsule protein repressor C-terminal domain%3B pfam12320 gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0248 SN35N_0249 SN35N_0249 sbcC sbcC 242780 245965 + exonuclease SbcC ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of sbcCD%3B cd03279%3B~ATPase involved in DNA repair [DNA replication%2C recombination%2C and repair]%3B COG0419%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~exonuclease SbcC [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0249 SN35N_0250 SN35N_0250 SN35N_0250 246100 247065 - prenyltransferase 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase [coenzyme metabolism]%3B cl17224%3B~UbiA prenyltransferase family%3B pfam01040%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prenyltransferase [Lactobacillus plantarum subsp. plantarum P-8] gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0250 SN35N_0251 SN35N_0251 hpk5 hpk5 247440 249077 - histidine protein kinase%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~dimerization interface [polypeptide binding]%3B~histidine protein kinase%3B sensor protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~signal transduction histidine kinase [signal transduction mechanisms]%3B COG0642 gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0251 SN35N_0252 SN35N_0252 SN35N_0252 249077 249763 - two-component response regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus rhamnosus GG%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~two-component response regulator [Lactobacillus rhamnosus GG] gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0252 SN35N_0253 SN35N_0253 SN35N_0253 249954 251303 - recombination factor protein RarA ATP binding site [chemical binding]%3B~MgsA AAA+ ATPase C terminal%3B pfam12002%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~recombination factor protein RarA [Lactobacillus helveticus DPC 4571]%3B~recombination factor protein RarA%3B reviewed%3B~walker A motif%3B~walker B motif gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0253 SN35N_0254 SN35N_0254 SN35N_0254 251472 252908 - 6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~6-phosphogluconate dehydrogenase%2C C-terminal domain%3B pfam00393%3B~6-phosphogluconate dehydrogenase%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0254 SN35N_0255 SN35N_0255 czcD czcD 253303 254265 + cobalt-zinc-cadmium cation transport protein cation efflux family%3B pfam01545%3B~cobalt-zinc-cadmium cation transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0255 SN35N_0256 SN35N_0256 SN35N_0256 254380 254964 - lipoprotein precursor identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~peptidase propeptide and YPEB domain%3B pfam03413%3B~predicted membrane protein [function unknown] gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0256 SN35N_0257 SN35N_0257 SN35N_0257 255253 255432 - 50S ribosomal protein L32 50S ribosomal protein L32 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L32%3B validated%3B PRK01110%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0257 SN35N_0258 SN35N_0258 SN35N_0258 255492 256046 - hypothetical protein hypothetical protein zj316_1541 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted metal-binding%2C possibly nucleic acid-binding protein [general function prediction only] gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0258 SN35N_0259 SN35N_0259 SN35N_0259 256171 257322 - UPF0348 protein HIGH nucleotidyl transferase%3B cl17673%3B~UPF0348 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0259 SN35N_0260 SN35N_0260 SN35N_0260 257337 258071 - methyltransferase S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0260 SN35N_0261 SN35N_0261 SN35N_0261 258068 258424 - hypothetical protein hypothetical protein zj316_1538 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized homolog of plant Iojap protein [function unknown] gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0261 SN35N_0262 SN35N_0262 SN35N_0262 258442 259059 - hydrolase%2C HAD superfamily Mg2+ binding site [ion binding]%3B~Zn2+ binding site [ion binding]%3B~hydrolase%2C HAD superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~organism:Lactobacillus plantarum ZJ316 gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0262 SN35N_0263 SN35N_0263 nadD nadD 259043 259678 - nicotinic acid mononucleotide adenylyltransferase (T/H)XGH motif%3B~identified by MetaGeneAnnotator%3B putative%3B~nicotinamide/nicotinate mononucleotide adenylyltransferase%3B cd02165%3B~nicotinic acid mononucleotide adenylyltransferase [Lactobacillus plantarum JDM1]%3B~nicotinic acid mononucleotide adenylyltransferase%3B provisional%3B PRK00071%3B~organism:Lactobacillus plantarum JDM1%3B~transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0263 SN35N_0264 SN35N_0264 SN35N_0264 259691 260005 - RNA binding protein%2C YhbY family Escherichia coli YhbY is associated with pre-50S ribosomal subunits%2C which implies a function in ribosome assembly%3B smart01103%3B~RNA binding protein%2C YhbY family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0264 SN35N_0265 SN35N_0265 SN35N_0265 260076 261212 - GTP-binding protein YqeH GTP-binding protein YqeH [Streptococcus agalactiae NEM316]%3B~GTP/Mg2+ binding site [chemical binding]%3B~GTPase YqeH%3B provisional%3B~circularly permuted YqeH GTPase%3B cd01855%3B~identified by MetaGeneAnnotator%3B putative%3B~in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis%3B~organism:Streptococcus agalactiae NEM316 gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0265 SN35N_0266 SN35N_0266 SN35N_0266 261209 261739 - hydrolase%2C HAD superfamily hydrolase%2C HAD superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted hydrolase of the HAD superfamily [general function prediction only] gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0266 SN35N_0267 SN35N_0267 SN35N_0267 262428 262910 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0267 SN35N_0268 SN35N_0268 ica1 ica1 262914 264215 + glycosyltransferase%2C family 2 CESA_like is the cellulose synthase superfamily%3B cd06423%3B~DXD motif%3B~N-glycosyltransferase%3B provisional%3B~glycosyl transferase family group 2%3B pfam13632%3B~glycosyltransferase%2C family 2 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0268 SN35N_0269 SN35N_0269 racD racD 264440 265186 - aspartate racemase Asp/Glu/Hydantoin racemase%3B cl00518%3B~aspartate racemase [Lactobacillus plantarum WCFS1]%3B~aspartate racemase%3B TIGR00035%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0269 SN35N_0270 SN35N_0270 SN35N_0270 265562 265909 - cinnamoyl ester hydrolase-like protein HxlR-like helix-turn-helix%3B pfam01638%3B~cinnamoyl ester hydrolase-like protein [Lactobacillus casei str. Zhang]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei str. Zhang%3B~predicted transcriptional regulators [transcription] gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0270 SN35N_0271 SN35N_0271 SN35N_0271 266074 267105 + quinone oxidoreductase arginate lyase and other MDR family members%3B cd08252%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~putative NAD(P) binding site [chemical binding]%3B~quinone oxidoreductase [Lactobacillus salivarius UCC118]%3B~zinc-binding alcohol dehydrogenase family protein%3B TIGR02817 gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0271 SN35N_0272 SN35N_0272 SN35N_0272 267514 268776 + recombination factor protein RarA ATP binding site [chemical binding]%3B~COG2256 ATPase related to the helicase subunit of the holliday junction resolvase%3B~MgsA AAA+ ATPase C terminal%3B pfam12002%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~recombination factor protein RarA [Lactobacillus amylovorus GRL 1112]%3B~recombination factor protein RarA%3B reviewed%3B~walker A motif%3B~walker B motif gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0272 SN35N_0273 SN35N_0273 SN35N_0273 268948 269259 - hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei BD-II%3B~unnamed protein product [Lactobacillus casei BD-II] gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0273 SN35N_0274 SN35N_0274 SN35N_0274 269503 269859 - 50S ribosomal protein L20 23S rRNA binding site [nucleotide binding]%3B~50S ribosomal protein L20 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~L13 binding site [polypeptide binding]%3B~L21 binding site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribosomal protein L20%3B cd07026 gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0274 SN35N_0275 SN35N_0275 rpmI rpmI 269896 270090 - 50S ribosomal protein L35 50S ribosomal protein L35 [Lactobacillus plantarum ZJ316]%3B~50S ribosomal protein L35%3B reviewed%3B PRK00172%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0275 SN35N_0276 SN35N_0276 SN35N_0276 270112 270612 - translation initiation factor IF-3 identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~translation initiation factor IF-3 [Enterococcus casseliflavus EC20]%3B~translation initiation factor IF-3%2C C-terminal domain%3B pfam00707%3B~translation initiation factor IF-3%2C N-terminal domain%3B pfam05198%3B~translation initiation factor IF-3%3B reviewed%3B PRK00028 gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0276 SN35N_0277 SN35N_0277 SN35N_0277 270855 272819 - threonyl-tRNA synthetase anticodon binding site%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~threonyl and alanyl tRNA synthetase second additional domain%3B smart00863%3B~threonyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~threonyl-tRNA synthetase%3B reviewed%3B PRK00413 gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0277 SN35N_0278 SN35N_0278 dnaI dnaI 273152 274087 - primosomal protein DnaI ATP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~primosomal protein DnaI N-terminus%3B pfam07319%3B~primosomal protein DnaI [Lactobacillus plantarum ZJ316]%3B~primosomal protein DnaI%3B reviewed%3B~walker A motif%3B~walker B motif gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0278 SN35N_0279 SN35N_0279 dnaB dnaB 274091 275494 - replication initiation and membrane attachment protein DnaB identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~replication initiation and membrane attachment protein DnaB [Lactobacillus plantarum subsp. plantarum P-8]%3B~replication initiation and membrane attachment%3B cl12121%3B~replication initiation/membrane attachment protein [DNA replication%2C recombination%2C and repair]%3B COG3611 gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0279 SN35N_0280 SN35N_0280 nrdR nrdR 275516 276031 - transcriptional repressor NrdR ATP cone domain%3B pfam03477%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcriptional regulator NrdR%3B validated%3B PRK00464%3B~transcriptional repressor NrdR [Lactobacillus plantarum ZJ316] gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0280 SN35N_0281 SN35N_0281 coaE coaE 276073 276666 - dephospho-CoA kinase ATP-binding [chemical binding]%3B~CoA-binding site [chemical binding]%3B~dephospho-CoA kinase [Lactobacillus plantarum WCFS1 ]%3B~dephospho-CoA kinase [coenzyme metabolism]%3B COG0237%3B~dephospho-coenzyme A kinase (DPCK%2C EC 2.7.1.24) catalyzes the phosphorylation of dephosphocoenzyme A (dCoA) to yield CoA%2C which is the final step in CoA biosynthesis%3B cd02022%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0281 SN35N_0282 SN35N_0282 fpg fpg 276676 277500 - formamidopyrimidine-DNA glycosylase 8OG recognition residue [nucleotide binding]%3B~DNA binding site [nucleotide binding]%3B~H2TH interface [polypeptide binding]%3B~N-terminal domain of Escherichia coli Fpg1/MutM and related bacterial DNA glycosylases%3B cd08966%3B~catalytic residue [active]%3B~formamidopyrimidine-DNA glycosylase H2TH domain%3B pfam06831%3B~formamidopyrimidine-DNA glycosylase [Lactobacillus plantarum subsp. plantarum P-8]%3B~formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~intercalation triad [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative catalytic residues [active]%3B~putative reading head residues%3B~turnover-facilitating residue%3B~zinc finger found in FPG and IleRS%3B pfam06827 gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0282 SN35N_0283 SN35N_0283 SN35N_0283 277512 280160 - DNA polymerase I DNA binding site [nucleotide binding]%3B~DNA polymerase I [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~DNA polymerase I%3B provisional%3B~H3TH domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs%3B cd09898%3B~PIN domain of the 5'-3' exonuclease of Taq DNA polymerase I and homologs%3B cd09859%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~inactive DEDDy 3'-5' exonuclease domain of Bacillus stearothermophilus DNA polymerase I and similar family-A DNA polymerases%3B cd06140%3B~metal binding site 1 [ion binding]%3B~metal binding site 2 [ion binding]%3B~metal binding site 3%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~polymerase I functions primarily to fill DNA gaps that arise during DNA repair%2C recombination and replication%3B cd08637%3B~putative 5' ssDNA interaction site%3B~putative DNA binding site [nucleotide binding]%3B~putative metal binding site [ion binding] gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0283 SN35N_0284 SN35N_0284 SN35N_0284 280423 281139 - integral membrane protein bacterial BAX inhibitor (BI)-1/YccA-like proteins%3B cd10432%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~integral membrane protein%2C interacts with FtsH [general function prediction only]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0284 SN35N_0285 SN35N_0285 SN35N_0285 281680 282567 - transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0285 SN35N_0286 SN35N_0286 yitW yitW 282591 282929 - FeS assembly SUF system protein FeS assembly SUF system protein%2C DUF59 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted metal-sulfur cluster biosynthetic enzyme [general function prediction only]%3B COG2151 gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0286 SN35N_0287 SN35N_0287 sufB sufB 283223 284629 - ABC transporter-associated protein ABC transporter-associated protein [Lactobacillus s alivarius UCC118]%3B~COG0719 [O] ABC-type transport system involved in Fe-S cluster assembly%2C permease component%3B~FeS assembly protein SufB%3B TIGR01980%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~uncharacterized protein family (UPF0051)%3B cl03223 gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0287 SN35N_0288 SN35N_0288 sufU sufU 284626 285093 - SUF system FeS assembly protein%2C NifU family NifU homolog involved in Fe-S cluster formation [energy production and conversion]%3B COG0822%3B~SUF system FeS assembly protein%2C NifU family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~iron-sulfur cluster scaffold-like proteins%3B cd06664%3B~organism:Lactobacillus plantarum ZJ316%3B~trimerization site [polypeptide binding] gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0288 SN35N_0289 SN35N_0289 csd1 csd1 285080 286318 - cysteine desulfurase catalytic residue [active]%3B~cysteine desulfurase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridoxal 5'-phosphate binding pocket [chemical binding]%3B~selenocysteine lyase/cysteine desulfurase [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0520 gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0289 SN35N_0290 SN35N_0290 sufD sufD 286302 287603 - ABC transporter%2C iron-sulfur cluster assembly protein SufD ABC transporter%2C iron-sulfur cluster assembly prote in SufD [Lactobacillus plantarum ZJ316]%3B~FeS assembly protein SufD%3B TIGR01981%3B~cysteine desulfurase activator SufB [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0719%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0290 SN35N_0291 SN35N_0291 SN35N_0291 287616 288413 - ABC transporter ATPase component ABC transporter ATPase component [Lactobacillus helveticus DPC 4571]%3B~ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~FeS assembly ATPase SufC%3B TIGR01978%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~walker A/P-loop%3B~walker B gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0291 SN35N_0292 SN35N_0292 feoA feoA 288669 288893 + ferrous iron transport protein A FeoA domain%3B pfam04023%3B~ferrous iron transport protein A [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene291 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0292 SN35N_0293 SN35N_0293 feoB feoB 288895 290883 + ferrous iron transport protein B Fe2+ transport system protein B [inorganic ion transport and metabolism]%3B COG0370%3B~GTP/Mg2+ binding site [chemical binding]%3B~ferrous iron transport protein B (FeoB) family%3B cd01879%3B~ferrous iron transport protein B C terminus%3B pfam07664%3B~ferrous iron transport protein B [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoside recognition%3B pfam07670%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0293 SN35N_0294 SN35N_0294 SN35N_0294 290900 291088 + hypothetical protein hypothetical protein zj316_1505 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0294 SN35N_0295 SN35N_0295 SN35N_0295 291354 292664 - UDP-N-acetylmuramate-L-alanine ligase Mur ligase family%2C catalytic domain%3B pfam01225%3B~Mur ligase family%2C glutamate ligase domain%3B pfam02875%3B~Mur ligase middle domain%3B pfam08245%3B~UDP-N-acetylmuramate--L-alanine ligase%3B provisional%3B PRK00421%3B~UDP-N-acetylmuramate-L-alanine ligase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0295 SN35N_0296 SN35N_0296 ftsK1 ftsK1 292727 295720 - cell division protein FtsK DNA segregation ATPase FtsK/SpoIIIE and related proteins [cell division and chromosome partitioning]%3B COG1674%3B~FtsK/SpoIIIE family%3B pfam01580%3B~cell division protein FtsK [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~this domain directs oriented DNA translocation and forms a winged helix structure%3B smart00843 gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0296 SN35N_0297 SN35N_0297 SN35N_0297 295753 296394 - tRNA-binding domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative tRNA-binding site [nucleotide binding]%3B~tRNA-binding domain protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0297 SN35N_0298 SN35N_0298 SN35N_0298 296563 296886 + extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted small secreted protein [function unknown] gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0298 SN35N_0299 SN35N_0299 trmB trmB 297030 297674 - tRNA (guanine-N(7)-)-methyltransferase S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tRNA (guanine-N(7)-)-methyltransferase [Lactobacillus plantarum ZJ316] gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0299 SN35N_0300 SN35N_0300 SN35N_0300 297760 298545 - aminoglycoside 3'-phosphotransferase ATP binding site [chemical binding]%3B~aminoglycoside 3'-phosphotransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphotransferase enzyme family%3B pfam01636%3B~substrate binding site [chemical binding] gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0300 SN35N_0301 SN35N_0301 ecsB ecsB 298664 299869 - ABC transporter%2C permease ABC transporter%2C permease [Lactobacillus plantarum subsp. plantarum ST-III]%3B~bacterial ABC transporter protein EcsB%3B pfam05975%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0301 SN35N_0302 SN35N_0302 SN35N_0302 299862 300599 - ABC-type transporter ATP-binding protein EcsA ABC transporter signature motif%3B~ABC-type Na+ transport system%2C ATPase component [energy production and conversion / inorganic ion transport and metabolism]%3B COG4555%3B~ABC-type transporter ATP-binding protein EcsA [Streptococcus pneumoniae 670-6B]%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B%3B~walker A/P-loop%3B~walker B gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0302 SN35N_0303 SN35N_0303 SN35N_0303 300798 301250 + nucleotide-binding protein%2C histidine triad family HIT family signature motif%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide-binding protein%2C histidine triad family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0303 SN35N_0304 SN35N_0304 SN35N_0304 301261 301602 + extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0304 SN35N_0305 SN35N_0305 prsA1 prsA1 301835 302731 + foldase protein PrsA 1 PPIC-type PPIASE domain%3B pfam00639%3B~SurA N-terminal domain%3B pfam09312%3B~foldase protein PrsA 1 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~peptidylprolyl isomerase%3B provisional%3B PRK04405 gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0305 SN35N_0306 SN35N_0306 SN35N_0306 303205 303909 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0306 SN35N_0307 SN35N_0307 SN35N_0307 303928 304521 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0307 SN35N_0308 SN35N_0308 SN35N_0308 304617 305663 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum WCFS1]%3B~domain of unknown function (DUF4381)%3B pfam14316%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0308 SN35N_0309 SN35N_0309 SN35N_0309 305723 306094 + cell surface protein cell surface protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0309 SN35N_0310 SN35N_0310 SN35N_0310 306100 309378 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0310 SN35N_0311 SN35N_0311 npr1 npr1 309680 310996 - NADH peroxidase NADH peroxidase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~uncharacterized NAD(FAD)-dependent dehydrogenases [general function prediction only]%3B COG0446 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0311 SN35N_0312 SN35N_0312 SN35N_0312 311150 311776 + transcription regulator%2C TetR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0312 SN35N_0313 SN35N_0313 SN35N_0313 311912 312553 - transcription regulator DNA binding site [nucleotide binding]%3B~cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [signal transduction mechanisms]%3B COG0664%3B~flexible hinge region%3B~helix_turn_helix%2C cAMP regulatory protein C-terminus%3B DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family%3B cd00092%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~non-specific DNA interactions [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative cAMP binding site [chemical binding]%3B~sequence specific DNA binding site [nucleotide binding]%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III] gene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0313 SN35N_0314 SN35N_0314 SN35N_0314 312642 313205 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei BD-II%3B~unnamed protein product [Lactobacillus casei BD-II] gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0314 SN35N_0315 SN35N_0315 SN35N_0315 313429 314256 - NmrA family protein identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4 gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0315 SN35N_0316 SN35N_0316 SN35N_0316 314386 314943 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4 gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0316 SN35N_0317 SN35N_0317 SN35N_0317 315462 316550 + glycosyltransferase-like protein DPM_DPG-synthase_like is a member of the glycosyltransferase 2 superfamily%3B cd04179%3B~DXD motif%3B~GtrA-like protein%3B pfam04138%3B~glycosyltransferase-like protein [Pediococcus pentosaceus ATCC 25745]%3B~glycosyltransferases involved in cell wall biogenesis [cell envelope biogenesis%2C outer membrane]%3B COG0463%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site%3B~organism:Pediococcus pentosaceus ATCC 25745%3B~predicted membrane protein [function unknown]%3B~putative catalytic site gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0317 SN35N_0318 SN35N_0318 SN35N_0318 316540 318525 + glycosyltransferase CESA_CelA_like are involved in the elongation of the glucan chain of cellulose%3B cd06421%3B~DXD motif%3B~PilZ domain%3B pfam07238%3B~glycosyltransferase [Lactobacillus brevis KB290]%3B~glycosyltransferase like family 2%3B pfam13641%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0318 SN35N_0319 SN35N_0319 SN35N_0319 318541 320379 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0319 SN35N_0320 SN35N_0320 SN35N_0320 320385 322268 + ABC superfamily ATP binding cassette transporter permease subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0320 SN35N_0321 SN35N_0321 ribH ribH 322403 322876 - 6%2C7-dimethyl-8-ribityllumazine synthase 6%2C7-dimethyl-8-ribityllumazine synthase [Lactobacillus plantarum ZJ316]%3B~homopentamer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~lumazine synthase (6%2C7-dimethyl-8-ribityllumazine synthase%2C LS)%2C catalyzes the penultimate step in the biosynthesis of riboflavin (vitamin B2)%3B type-I%3B cd09209%3B~organism:Lactobacillus plantarum ZJ316 gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0321 SN35N_0322 SN35N_0322 ribA ribA 322873 324087 - 3%2C4-dihydroxy-2-butanone 4-phosphate synthase /GTP cyclohydrolase II 3%2C4-dihydroxy-2-butanone 4-phosphate synthase /GTP cyclohydrolase II [Lactobacillus plantarum WCFS1]%3B~3%2C4-dihydroxy-2-butanone 4-phosphate synthase%3B pfam00926%3B~bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein%3B provisional%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0322 SN35N_0323 SN35N_0323 ribB ribB 324089 324691 - riboflavin synthase%2C alpha chain identified by MetaGeneAnnotator%3B putative%3B~lumazine binding domain%3B pfam00677%3B~organism:Lactobacillus plantarum ZJ316%3B~riboflavin synthase subunit alpha%3B provisional%3B~riboflavin synthase%2C alpha chain [Lactobacillus plantarum ZJ316] gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0323 SN35N_0324 SN35N_0324 ribD ribD 324692 325759 - pyrimidine reductase%2C riboflavin biosynthesis protein RibD RibD C-terminal domain%3B cl17279%3B~Zn binding site [ion binding]%3B~catalytic motif [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyrimidine reductase%2C riboflavin biosynthesis prote in RibD [Lactobacillus plantarum ZJ316]%3B~riboflavin biosynthesis protein RibD%3B TIGR00326 gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0324 SN35N_0325 SN35N_0325 SN35N_0325 326276 328825 + integral membrane protein bacterial membrane protein YfhO%3B pfam09586%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0325 SN35N_0326 SN35N_0326 SN35N_0326 328907 329134 - MutT/NudX family protein MutT/NudX family protein[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0326 SN35N_0327 SN35N_0327 SN35N_0327 329177 329320 - phosphohydrolase%2C MutT/NudX family identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphohydrolase%2C MutT/NudX family [Lactobacillus plantarum WCFS1] gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0327 SN35N_0328 SN35N_0328 SN35N_0328 329440 331476 - membrane protein conserved hypothetical integral membrane protein%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0328 SN35N_0329 SN35N_0329 SN35N_0329 331473 332468 - glycosyltransferase%2C family 2 DXD motif%3B~bacterial DPM1_like enzymes are related to eukaryotic DPM1%3B cd04187%3B~glycosyltransferase%2C family 2 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site%3B~organism:Lactobacillus plantarum ZJ316%3B~putative catalytic site%3B~undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase%3B provisional gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0329 SN35N_0330 SN35N_0330 SN35N_0330 333328 333768 + nucleoside 2-deoxyribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~nucleoside 2-deoxyribosyltransferase [Lactobacillus plantarum WCFS1]%3B~nucleoside 2-deoxyribosyltransferase%3B pfam05014%3B~organism:Lactobacillus plantarum WCFS1 gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0330 SN35N_0331 SN35N_0331 SN35N_0331 333839 334399 - hypothetical protein hypothetical protein zj316_1470 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0331 SN35N_0332 SN35N_0332 SN35N_0332 334487 336925 - fumarate reductase FAD binding domain%3B pfam00890%3B~FMN-binding domain%3B cl01081%3B~L-aspartate oxidase%3B provisional%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~fumarate reductase/succinate dehydrogenase%2CFAD-binding flavoprotein%3B NADPH-dependent FMN reductase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted flavoprotein [general function prediction only] gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0332 SN35N_0333 SN35N_0333 SN35N_0333 336928 337542 - NADPH-dependent FMN reductase family protein NADPH-dependent FMN reductase family protein [Lactobacillus plantarum ZJ316]%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted flavoprotein [general function prediction only] gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0333 SN35N_0334 SN35N_0334 SN35N_0334 337886 338833 + transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0334 SN35N_0335 SN35N_0335 nsr nsr 339019 339861 + nisin resistance protein C-terminal processing peptidase family S41%3B cd06567%3B~active site serine [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~nisin resistance protein[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0335 SN35N_0336 SN35N_0336 SN35N_0336 340079 341248 - hypothetical protein hypothetical protein zj316_1464 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0336 SN35N_0337 SN35N_0337 SN35N_0337 341634 342614 - metal-dependent phosphohydrolase%2C HD family 3'-5' exoribonuclease YhaM%3B provisional%3B~Mg2+ binding site [ion binding]%3B~Zn2+ binding site [ion binding]%3B~generic binding surface I%3B~generic binding surface II%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~metal-dependent phosphohydrolase%2C HD family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0337 SN35N_0338 SN35N_0338 SN35N_0338 342625 345102 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized conserved protein [function unknown] gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0338 SN35N_0339 SN35N_0339 SN35N_0339 345092 346312 - phosphoesterase DNA binding site [nucleotide binding]%3B~Mre11 nuclease%2C N-terminal metallophosphatase domain%3B cd00840%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoesterase [Lactobacillus plantarum ZJ316] gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0339 SN35N_0340 SN35N_0340 SN35N_0340 346382 346726 - UPF0342 protein UPF0342 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0340 SN35N_0341 SN35N_0341 pbp2A pbp2A 346817 348946 - transpeptidase-transglycosylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~penicillin binding protein transpeptidase domain%3B pfam00905%3B~penicillin-binding protein%2C 1A family%3B TIGR02074%3B~transglycosylase%3B pfam00912%3B~transpeptidase-transglycosylase [Lactobacillus plantarum ZJ316] gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0341 SN35N_0342 SN35N_0342 SN35N_0342 349240 349362 - hypothetical protein hypothetical protein zj316_1458 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0342 SN35N_0343 SN35N_0343 argR1 argR1 349440 349901 - arginine regulator arginine regulator [Lactobacillus plantarum ZJ316]%3B~arginine repressor [transcription]%3B COG1438%3B~arginine repressor%2C C-terminal domain%3B pfam02863%3B~arginine repressor%2C DNA binding domain%3B pfam01316%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0343 SN35N_0344 SN35N_0344 arcT arcT 350079 351200 - aminotransferase aminotransferase [Lactobacillus plantarum ZJ316]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~transaminase%3B validated gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0344 SN35N_0345 SN35N_0345 SN35N_0345 351266 351874 - amino acid efflux protein LysE type translocator%3B cl00565%3B~amino acid efflux protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0345 SN35N_0346 SN35N_0346 SN35N_0346 352108 353559 + aminotransferase with N-terminal regulator domain%2C GntR family DNA-binding site [nucleotide binding]%3B~aminotransferase with N-terminal regulator domain%2C GntR family [Lactobacillus plantarum ZJ316]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0346 SN35N_0347 SN35N_0347 dltC2 dltC2 353668 353904 + D-alanine--poly(phosphoribitol) ligase subunit 2 D-alanine--poly(phosphoribitol) ligase subunit 2 [Lactobacillus plantarum JDM1]%3B~D-alanine--poly(phosphoribitol) ligase subunit 2%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0347 SN35N_0348 SN35N_0348 SN35N_0348 354175 354786 + cell surface protein%2C ErfK family L%2CD-transpeptidase catalytic domain%3B pfam03734%3B~cell surface protein%2C ErfK family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown]%3B COG1376 gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0348 SN35N_0349 SN35N_0349 SN35N_0349 354786 355970 + transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum JDM1] gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0349 SN35N_0350 SN35N_0350 SN35N_0350 355982 357454 - 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus amylovorus GRL 1112]%3B~COG2723 beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0350 SN35N_0351 SN35N_0351 pts15C pts15C 357457 358812 - beta-glucosides PTS%2C EIIC beta-glucosides PTS%2C EIIC [Lactobacillus plantarum JDM1]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0351 SN35N_0352 SN35N_0352 pts15B pts15B 358846 359145 - PTS system%2C beta-glucosides-specific EIIB component P-loop%3B~PTS system%2C beta-glucosides-specific EIIB component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0352 SN35N_0353 SN35N_0353 pts15A pts15A 359142 359351 - PTS system%2C beta-glucosides-specific EIIA component PTS system%2C Lactose/cellobiose specific IIA subunit%3B pfam02255%3B~PTS system%2C beta-glucosides-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~methionine cluster%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0353 SN35N_0354 SN35N_0354 SN35N_0354 359753 360223 + hypothetical protein domain of unknown function (DUF3284)%3B pfam11687%3B~hypothetical protein zj316_1444 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0354 SN35N_0355 SN35N_0355 SN35N_0355 360436 362991 - transcription regulator levR PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transcription regulator levR [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional antiterminator [transcription]%3B~transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [transcription / signal transduction mechanisms]%3B COG1221 gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0355 SN35N_0356 SN35N_0356 SN35N_0356 363126 363782 - hypothetical protein hypothetical protein zj316_1442 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0356 SN35N_0357 SN35N_0357 SN35N_0357 364466 366460 - ABC superfamily ATP binding cassette transporter%2C ATP-binding and permease ABC superfamily ATP binding cassette transporter%2C ATP-binding and permease [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ABC-type antimicrobial peptide transport system%2C permease component [defense mechanisms]%3B COG0577%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide%2C and cell division protein%3B cd03255%3B~D-loop%3B~FtsX-like permease family%3B pfam02687%3B~H-loop/switch region%3B~MacB-like periplasmic core domain%3B pfam12704%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0357 SN35N_0358 SN35N_0358 SN35N_0358 366730 367206 + hypothetical protein hypothetical protein zj316_1440 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0358 SN35N_0359 SN35N_0359 SN35N_0359 367412 369100 - arginyl-tRNA synthetase HIGH motif%3B~KMSK motif region%3B~anticodon binding site%3B~anticodon-binding domain of arginyl tRNA synthetases%3B cd07956%3B~arginyl tRNA synthetase N terminal dom%3B smart01016%3B~arginyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~arginyl-tRNA synthetase%3B reviewed%3B~catalytic core domain of arginyl-tRNA synthetases%3B cd00671%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~tRNA binding surface [nucleotide binding] gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0359 SN35N_0360 SN35N_0360 SN35N_0360 369372 369818 - GNAT family acetyltransferase GNAT family acetyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0360 SN35N_0361 SN35N_0361 SN35N_0361 370207 370452 - hypothetical protein hypothetical protein zj316_1437 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0361 SN35N_0362 SN35N_0362 SN35N_0362 370579 371970 - Na+ driven multidrug efflux protein%2C MATE family Na+ driven multidrug efflux protein%2C MATE family [Lactobacillus plantarum ZJ316]%3B~Na+-driven multidrug efflux pump [defense mechanisms]%3B COG0534%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA%3B cd13138 gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0362 SN35N_0363 SN35N_0363 SN35N_0363 372245 374020 - sodium/sulfate symport protein TrkA-C domain%3B pfam02080%3B~di- and tricarboxylate transporters [inorganic ion transport and metabolism]%3B COG0471%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sodium/sulfate symport protein [Lactobacillus plantarum ZJ316] gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0363 SN35N_0364 SN35N_0364 astA astA 374453 376192 - arylsulfate sulfotransferase arylsulfate sulfotransferase [Lactobacillus plantarum JDM1]%3B~arylsulfotransferase (ASST)%3B pfam05935%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0364 SN35N_0365 SN35N_0365 SN35N_0365 376405 377361 - exopolyphosphatase DHH family%3B pfam01368%3B~exopolyphosphatase [Lactobacillus plantarum JDM1]%3B~exopolyphosphatase-related proteins [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0365 SN35N_0366 SN35N_0366 cysC cysC 377351 377974 - adenylylsulfate kinase adenylylsulfate kinase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding site [chemical binding]%3B~organism:Lactobacillus plantarum JDM1 gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0366 SN35N_0367 SN35N_0367 sat sat 377977 379152 - sulfate adenylyltransferase ATP-sulfurylase%3B cd00517%3B~HXXH motif%3B~flexible loop%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sulfate adenylyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~sulfate adenylyltransferase%3B reviewed%3B PRK04149 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0367 SN35N_0368 SN35N_0368 SN35N_0368 379130 380767 - hypothetical protein hypothetical protein zj316_1428 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0368 SN35N_0369 SN35N_0369 SN35N_0369 381655 383961 + 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase%3B~5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Listeria monocytogenes]%3B~THF binding site%3B~catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~substrate binding site [chemical binding]%3B~zinc-binding site [ion binding] gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0369 SN35N_0370 SN35N_0370 SN35N_0370 383975 385831 + methylenetetrahydrofolate reductase FAD binding site [chemical binding]%3B~bifunctional homocysteine S-methyltransferase/5%2C10-methylenetetrahydrofolate reductase protein%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~methionine synthase I (cobalamin-dependent)%2C methyltransferase domain [amino acid transport and metabolism]%3B cl14105%3B~methylenetetrahydrofolate reductase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0370 SN35N_0371 SN35N_0371 SN35N_0371 385904 386263 + UPF0344 protein UPF0344 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0371 SN35N_0372 SN35N_0372 gtcA1 gtcA1 386363 386884 - teichoic acid glycosylation protein GtrA-like protein%3B pfam04138%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown]%3B~teichoic acid glycosylation protein [Lactobacillus plantarum ZJ316] gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0372 SN35N_0373 SN35N_0373 SN35N_0373 386990 388003 + extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0373 SN35N_0374 SN35N_0374 SN35N_0374 388168 388593 + lipoprotein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0374 SN35N_0375 SN35N_0375 SN35N_0375 389158 390039 - prophage protein bacterial SH3 domain%3B pfam08460%3B~glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0375 SN35N_0376 SN35N_0376 SN35N_0376 390039 390323 - hypothetical protein hypothetical protein zj316_1418 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0376 SN35N_0377 SN35N_0377 SN35N_0377 390323 390532 - hypothetical protein hypothetical protein zj316_1417 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0377 SN35N_0378 SN35N_0378 SN35N_0378 390538 390918 - hypothetical protein hypothetical protein zj316_1416 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0378 SN35N_0379 SN35N_0379 SN35N_0379 390935 391369 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2025 gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0379 SN35N_0380 SN35N_0380 SN35N_0380 391371 391862 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316]%3B~protein of unknown function (DUF1617)%3B pfam07761 gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0380 SN35N_0381 SN35N_0381 SN35N_0381 391879 396648 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0381 SN35N_0382 SN35N_0382 SN35N_0382 396668 397489 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage tail protein%3B cl17486%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0382 SN35N_0383 SN35N_0383 SN35N_0383 397493 402040 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage tail tape measure protein%2C TP901 family%2C core region%3B TIGR01760%3B~prophage protein [Lactobacillus plantarum ZJ316]%3B~protein of unknown function (DUF3106)%3B pfam11304 gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0383 SN35N_0384 SN35N_0384 SN35N_0384 402059 402280 - prophage protein%2C tail tape measure protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein%2C tail tape measure protein [Lactobacillus plantarum ZJ316] gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0384 SN35N_0385 SN35N_0385 SN35N_0385 402304 402618 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0385 SN35N_0386 SN35N_0386 SN35N_0386 402710 403321 - major tail protein identified by MetaGeneAnnotator%3B putative%3B~major tail protein [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~phage major tail protein%2C phi13 family%3B TIGR01603 gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0386 SN35N_0387 SN35N_0387 SN35N_0387 403336 403758 - gp10 protein gp10 protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0387 SN35N_0388 SN35N_0388 SN35N_0388 403755 404162 - Gp9 protein Gp9 protein [Lactobacillus plantarum ZJ316]%3B~bacteriophage protein of unknown function (DUF646)%3B cl12124%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0388 SN35N_0389 SN35N_0389 SN35N_0389 404159 404548 - Gp8 protein Gp8 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene388 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0389 SN35N_0390 SN35N_0390 SN35N_0390 404529 404819 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0390 SN35N_0391 SN35N_0391 SN35N_0391 404958 406130 - major head protein Cps identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0391 SN35N_0392 SN35N_0392 SN35N_0392 406153 406875 - prophage protein%2C major head protein active site residues [active]%3B~caseinolytic protease (ClpP) is an ATP-dependent%2C highly conserved serine protease%3B cd07016%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomer interface [polypeptide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein%2C major head protein [Lactobacillus plantarum ZJ316] gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0392 SN35N_0393 SN35N_0393 SN35N_0393 406862 407995 - phage portal protein%2C HK97 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage portal protein%2C HK97 family [Lactobacillus plantarum ZJ316]%3B~phage portal protein%2C HK97 family%3B TIGR01537%3B~phage-related protein [function unknown]%3B cl01923 gene gene392 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0393 SN35N_0394 SN35N_0394 SN35N_0394 408014 409693 - prophage protein%2C portal protein%2C HK97 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage terminase-like protein%2C large subunit [general function prediction only]%3B~prophage protein%2C portal protein%2C HK97 family [Lactobacillus plantarum ZJ316] gene gene393 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0394 SN35N_0395 SN35N_0395 SN35N_0395 409690 409977 - Gp1 protein Gp1 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0395 SN35N_0396 SN35N_0396 SN35N_0396 410086 410328 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0396 SN35N_0397 SN35N_0397 SN35N_0397 410346 410588 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene396 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0397 SN35N_0398 SN35N_0398 SN35N_0398 410588 410926 - Gp65 protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0398 SN35N_0399 SN35N_0399 SN35N_0399 410910 411125 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0399 SN35N_0400 SN35N_0400 SN35N_0400 411426 412109 - hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus prophage Lj928 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0400 SN35N_0401 SN35N_0401 SN35N_0401 412264 412965 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0401 SN35N_0402 SN35N_0402 SN35N_0402 413041 413454 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0402 SN35N_0403 SN35N_0403 SN35N_0403 413466 413774 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0403 SN35N_0404 SN35N_0404 SN35N_0404 413906 414391 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum NC8 gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0404 SN35N_0405 SN35N_0405 SN35N_0405 414403 414654 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0405 SN35N_0406 SN35N_0406 SN35N_0406 414651 414827 - hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage LP65 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0406 SN35N_0407 SN35N_0407 SN35N_0407 414830 414997 - prophage P2a protein 25 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2a protein 25 [Lactobacillus plantarum WCFS1] gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0407 SN35N_0408 SN35N_0408 SN35N_0408 414990 415238 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc pseudomesenteroides 4882 gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0408 SN35N_0409 SN35N_0409 SN35N_0409 415248 415583 - prophage protein VRR-NUC domain%3B pfam08774%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0409 SN35N_0410 SN35N_0410 SN35N_0410 415836 417101 - prophage Lp3 protein 8%2C helicase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~prophage Lp3 protein 8%2C helicase [Lactobacillus plantarum JDM1]%3B~virulence-associated protein E%3B pfam05272 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0410 SN35N_0411 SN35N_0411 SN35N_0411 417098 417892 - prophage protein DNA-binding residues [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~polymerase nucleotide-binding site%3B~primase C terminal 1 (PriCT-1)%3B pfam08708%3B~primase nucleotide-binding site [nucleotide binding]%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0411 SN35N_0412 SN35N_0412 SN35N_0412 417963 418595 - prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316] gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0412 SN35N_0413 SN35N_0413 SN35N_0413 418598 419314 - phage NTP-binding protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phage NTP-binding protein [Lactobacillus plantarum JDM1]%3B~phage nucleotide-binding protein%3B TIGR01618 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0413 SN35N_0414 SN35N_0414 SN35N_0414 419311 420570 - prophage protein%2C NTP-binding protein ATP-binding site [chemical binding]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~DNA or RNA helicases of superfamily II [transcription / DNA replication%2C recombination%2C and repair]%3B COG1061%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein%2C NTP-binding protein [Lactobacillus plantarum ZJ316]%3B~putative Mg++ binding site [ion binding] gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0414 SN35N_0415 SN35N_0415 SN35N_0415 420722 421201 - hypothetical protein hypothetical protein zj316_1382 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~siphovirus Gp157%3B pfam05565 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0415 SN35N_0416 SN35N_0416 SN35N_0416 421198 421317 - hypothetical protein hypothetical protein zj316_1381 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0416 SN35N_0417 SN35N_0417 SN35N_0417 421305 421622 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus epidermidis W23144 gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0417 SN35N_0418 SN35N_0418 SN35N_0418 421625 421804 - hypothetical protein hypothetical protein zj316_1380 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0418 SN35N_0419 SN35N_0419 SN35N_0419 421767 421952 - hypothetical protein hypothetical protein zj316_1379 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0419 SN35N_0420 SN35N_0420 SN35N_0420 421945 422121 - hypothetical protein hypothetical protein zj316_1378 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0420 SN35N_0421 SN35N_0421 SN35N_0421 422102 422383 - hypothetical protein hypothetical protein zj316_1377 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0421 SN35N_0422 SN35N_0422 SN35N_0422 422498 422836 - hypothetical protein domain of unknown function (DUF771)%3B pfam05595%3B~hypothetical protein zj316_1376 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0422 SN35N_0423 SN35N_0423 SN35N_0423 422836 423039 - hypothetical protein hypothetical protein zj316_1375 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0423 SN35N_0424 SN35N_0424 SN35N_0424 423043 423252 - hypothetical protein hypothetical protein zj316_1374 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0424 SN35N_0425 SN35N_0425 SN35N_0425 423574 423948 + putative prophage Lp1 protein 8 helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~putative prophage Lp1 protein 8 [Lactobacillus plantarum ZJ316]%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0425 SN35N_0426 SN35N_0426 SN35N_0426 423958 424389 + prophage Lp2 protein 8 domain of unknown function (DUF955)%3B pfam06114%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage Lp2 protein 8 [Lactobacillus plantarum ZJ316] gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0426 SN35N_0427 SN35N_0427 SN35N_0427 424413 424853 + hypothetical protein hypothetical protein zj316_1371 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0427 SN35N_0428 SN35N_0428 SN35N_0428 424941 425564 + hypothetical protein hypothetical protein zj316_1370 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0428 SN35N_0429 SN35N_0429 SN35N_0429 425687 428479 + hypothetical protein hypothetical protein zj316_1369 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase domain%3B pfam13659%3B~organism:Lactobacillus plantarum ZJ316%3B~type II restriction enzyme%2C methylase subunits [defense mechanisms] gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0429 SN35N_0430 SN35N_0430 SN35N_0430 428650 429780 + hypothetical protein Int/Topo IB signature motif%3B~hypothetical protein zj316_1368 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase [DNA replication%2C recombination%2C and repair]%3B COG0582%3B~organism:Lactobacillus plantarum ZJ316 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0430 SN35N_0431 SN35N_0431 SN35N_0431 430370 432637 - excinuclease ABC subunit A ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~excinuclease ABC subunit A [Lactobacillus rhamnosus GG]%3B~excinuclease ATPase subunit [DNA replication%2C recombination%2C and repair]%3B COG0178%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~walker A/P-loop%3B~walker B gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0431 SN35N_0432 SN35N_0432 SN35N_0432 432702 432989 - hypothetical protein hypothetical protein zj316_1366 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative heavy-metal-binding%3B cl00426 gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0432 SN35N_0433 SN35N_0433 SN35N_0433 433104 433616 + hypothetical protein hypothetical protein zj316_1365 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0433 SN35N_0434 SN35N_0434 SN35N_0434 433733 434209 + MarR family transcriptional regulator MarR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~MarR family%3B pfam01047%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0434 SN35N_0435 SN35N_0435 SN35N_0435 434881 435567 + membrane-bound protease%2C CAAX family CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound protease%2C CAAX family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0435 SN35N_0436 SN35N_0436 SN35N_0436 435606 435977 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0436 SN35N_0437 SN35N_0437 SN35N_0437 436188 436526 - extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0437 SN35N_0438 SN35N_0438 pltR pltR 436694 437461 - two-component system response regulator LytTr DNA-binding domain%3B pfam04397%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279%3B~two-component system response regulator [Lactobacillus plantarum ZJ316] gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0438 SN35N_0439 SN35N_0439 SN35N_0439 437467 438729 - two-component system histidine protein kinase ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B pfam02518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~two-component system histidine protein kinase [Lactobacillus plantarum 16] gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0439 SN35N_0440 SN35N_0440 SN35N_0440 439018 439626 - hypothetical protein hypothetical protein zj316_1358 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0440 SN35N_0441 SN35N_0441 SN35N_0441 439840 440763 + transposase%2C IS30 family COG: COG2826%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus reuteri I5007%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus reuteri I5007] gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0441 SN35N_0442 SN35N_0442 SN35N_0442 440814 441635 - HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus plantarum JDM1]%3B~haloacid dehalogenase-like hydrolase%3B cl17202%3B~identified by MetaGeneAnnotator%3B putative%3B~motif I%3B~motif II%3B~organism:Lactobacillus plantarum JDM1%3B~predicted hydrolases of the HAD superfamily [general function prediction only]%3B COG0561 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0442 SN35N_0443 SN35N_0443 SN35N_0443 442049 442987 - transport protein%2C EamA family carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transport protein%2C EamA family [Lactobacillus plantarum ZJ316] gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0443 SN35N_0444 SN35N_0444 SN35N_0444 443003 443644 - short-chain dehydrogenase/oxidoreductase%2C NAD(P)-dependent NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase%2CNAD(P)-dependent [Lactobacillus plantarum WCFS1] gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0444 SN35N_0445 SN35N_0445 SN35N_0445 443641 444033 - regulatory protein%2C MerR DNA binding residues [nucleotide binding]%3B~MerR HTH family regulatory protein%3B pfam13411%3B~helix-turn-helix DNA binding domain of transcription regulators from the MerR superfamily%3B cl02600%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~regulatory protein%2C MerR [Lactobacillus plantarum subsp. plantarum P-8] gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0445 SN35N_0446 SN35N_0446 mrsA1 mrsA1 444365 445168 + protein-methionine-S-oxide reductase enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~methionine sulfoxide reductase A%3B provisional%3B~organism:Lactobacillus plantarum JDM1%3B~protein-methionine-S-oxide reductase [Lactobacillus plantarum JDM1] gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0446 SN35N_0447 SN35N_0447 SN35N_0447 445731 446717 + ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC transporter signature motif%3B~ABC transporter%3B pfam00005%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~LytTr DNA-binding domain%3B pfam04397%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279%3B~walker A/P-loop%3B~walker B gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0447 SN35N_0448 SN35N_0448 SN35N_0448 447183 447725 + ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker B gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0448 SN35N_0449 SN35N_0449 SN35N_0449 447722 448459 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum WCFS1]%3B~ABC-2 family transporter protein%3B cl17866%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0449 SN35N_0450 SN35N_0450 SN35N_0450 448480 448647 + hypothetical protein hypothetical protein zj316_1347 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0450 SN35N_0451 SN35N_0451 SN35N_0451 449045 449257 + membrane protein YhgE/Pip N-terminal domain%3B TIGR03061%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~type VII secretion protein EsaA%2C N-terminal domain%3B TIGR03929 gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0451 SN35N_0452 SN35N_0452 SN35N_0452 449284 451995 + integral membrane protein YhgE/Pip C-terminal domain%3B TIGR03062%3B~YhgE/Pip N-terminal domain%3B TIGR03061%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted membrane protein [function unknown]%3B~type VII secretion protein EsaA%2C N-terminal domain%3B TIGR03929 gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0452 SN35N_0453 SN35N_0453 mscl3 mscl3 452499 452879 + large-conductance mechanosensitive channel identified by MetaGeneAnnotator%3B putative%3B~large-conductance mechanosensitive channel [Lactobacillus buchneri CD034]%3B~large-conductance mechanosensitive channel%3B provisional%3B PRK13952%3B~large-conductance mechanosensitive channel%3B reviewed%3B PRK00567%3B~organism:Lactobacillus buchneri CD034 gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0453 SN35N_0454 SN35N_0454 dgk2 dgk2 452984 453631 + deoxynucleoside kinase deoxynucleoside kinase [Lactobacillus plantarum ZJ316]%3B~deoxynucleoside kinases [nucleotide transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate specificity [chemical binding]%3B~substrate-binding site [chemical binding] gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0454 SN35N_0455 SN35N_0455 glpQ1 glpQ1 453813 454499 - glycerophosphodiester phosphodiesterase catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily%3B cl14615%3B~catalytic site [active]%3B~glycerophosphodiester phosphodiesterase [Lactobacillus plantarum WCFS1]%3B~glycerophosphoryl diester phosphodiesterase [energy production and conversion]%3B COG0584%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0455 SN35N_0456 SN35N_0456 ugpB ugpB 454520 455872 - glycerol-3-phosphate ABC transporter%2C substrate binding protein ABC-type sugar transport system%2C periplasmic component [carbohydrate transport and metabolism]%3B COG1653%3B~bacterial extracellular solute-binding protein%3B cl17199%3B~glycerol-3-phosphate ABC transporter%2C substrate binding protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0456 SN35N_0457 SN35N_0457 SN35N_0457 455869 456711 - sugar ABC superfamily ATP binding cassette transporter%2C membrane protein ABC-ATPase subunit interface%3B~ABC-type sugar transport system%2C permease component [carbohydrate transport and metabolism]%3B COG0395%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative PBP binding loops%3B~sugar ABC superfamily ATP binding cassette transporter%2C membrane protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0457 SN35N_0458 SN35N_0458 ugpA ugpA 456711 457676 - glycerol-3-phosphate ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~glycerol-3-phosphate ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative PBP binding loops gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0458 SN35N_0459 SN35N_0459 ugpC ugpC 457651 458751 - glycerol-3-phosphate ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC-type sugar transport systems%2C ATPase components [carbohydrate transport and metabolism]%3B COG3839%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~TOBE domain%3B pfam08402%3B~glycerol-3-phosphate ABC transporter%2CATP-binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0459 SN35N_0460 SN35N_0460 SN35N_0460 459093 459599 - nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0460 SN35N_0461 SN35N_0461 pepV pepV 459626 461029 - dipeptidase PepV M20 peptidase Xaa-His dipeptidase (PepV) degrades hydrophobic dipeptides%3B cd03888%3B~dipeptidase PepV [Lactobacillus plantarum JDM1]%3B~dipeptidase PepV%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum JDM1 gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0461 SN35N_0462 SN35N_0462 SN35N_0462 461156 461992 + sugar kinase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative ATP binding site [chemical binding]%3B~putative substrate binding site [chemical binding]%3B~sugar kinase [Lactobacillus plantarum WCFS1] gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0462 SN35N_0463 SN35N_0463 rsuA rsuA 462129 462869 - pseudouridine synthase 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [translation%2C ribosomal structure and biogenesis]%3B COG1187%3B~RNA binding surface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pseudouridine synthase [Lactobacillus plantarum ZJ316]%3B~pseudouridine synthase%2C Escherichia coli RsuA like%3B cd02553%3B~uracil binding [chemical binding] gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0463 SN35N_0464 SN35N_0464 SN35N_0464 462877 464547 - MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter MOP superfamily multidrug/oligosaccharidyl-lipid/po lysaccharide flippase transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~stage V sporulation protein B%2C also known as stage III sporulation protein F%2C and related proteins%3B cd13124%3B~stage V sporulation protein B%3B TIGR02900 gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0464 SN35N_0465 SN35N_0465 SN35N_0465 465071 467497 - leucyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases%3B cd07958%3B~catalytic core domain of leucyl-tRNA synthetases%3B cd00812%3B~identified by MetaGeneAnnotator%3B putative%3B~leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]%3B~leucyl-tRNA synthetase%2C domain 2%3B pfam13603%3B~leucyl-tRNA synthetase%3B validated%3B PRK00390%3B~nucleotidyl transferase superfamily%3B cl00015%3B~organism:Enterococcus casseliflavus EC20%3B~tRNA binding surface [nucleotide binding] gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0465 SN35N_0466 SN35N_0466 SN35N_0466 468209 468388 - putative uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Aureococcus anophagefferens gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0466 SN35N_0467 SN35N_0467 SN35N_0467 468712 469239 + methyltransferase identified by MetaGeneAnnotator%3B putative%3B~methyltransferase[Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative rRNA methylase%3B pfam06962 gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0467 SN35N_0468 SN35N_0468 SN35N_0468 469335 469532 - hypothetical protein hypothetical protein zj316_1330 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0468 SN35N_0469 SN35N_0469 tagE3 tagE3 469562 471088 - poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum WCFS1] gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0469 SN35N_0470 SN35N_0470 tagE2 tagE2 471099 472607 - poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum WCFS1] gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0470 SN35N_0471 SN35N_0471 SN35N_0471 472634 474268 - glycosyl transferase glycosyl transferase%2C group I [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0471 SN35N_0472 SN35N_0472 SN35N_0472 474395 482461 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0472 SN35N_0473 SN35N_0473 SN35N_0473 482583 483092 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0473 SN35N_0474 SN35N_0474 SN35N_0474 483608 485110 - methionine transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~methionine transport protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative substrate translocation pore gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0474 SN35N_0475 SN35N_0475 SN35N_0475 485245 486432 - S-adenosylmethionine synthetase S-adenosylmethionine synthetase [Lactobacillus gasseri ATCC 33323]%3B~S-adenosylmethionine synthetase%2C C-terminal domain%3B pfam02773%3B~S-adenosylmethionine synthetase%2C N-terminal domain%3B pfam00438%3B~S-adenosylmethionine synthetase%2C central domain%3B pfam02772%3B~S-adenosylmethionine synthetase%3B validated%3B~catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0475 SN35N_0476 SN35N_0476 SN35N_0476 486646 487365 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0476 SN35N_0477 SN35N_0477 tagE1 tagE1 487441 488940 - poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum subsp. plantarum P-8] gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0477 SN35N_0478 SN35N_0478 mmuM mmuM 489338 490267 - homocysteine methyltransferase converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines%3B~homocysteine S-methyltransferase%3B pfam02574%3B~homocysteine methyltransferase [Lactobacillus plantarum JDM1]%3B~homocysteine methyltransferase%3B provisional%3B PRK09485%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0478 SN35N_0479 SN35N_0479 lysP2 lysP2 490381 491763 + amino acid transporter S-methylmethionine transporter%3B provisional%3B~amino acid transporter [Bifidobacterium longum DJO10A]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Bifidobacterium longum DJO10A%3B~spore germination protein%3B cl15802 gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0479 SN35N_0480 SN35N_0480 hemH hemH 492095 493069 + ferrochelatase C-terminal domain interface [polypeptide binding]%3B~N-terminal domain interface [polypeptide binding]%3B~ferrochelatase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ferrochelatase%3B pfam00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0480 SN35N_0481 SN35N_0481 mntH3 mntH3 493041 494366 + cation transport protein Mn2+ and Fe2+ transporters of the NRAMP family [inorganic ion transport and metabolism]%3B cl15845%3B~cation transport protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~natural resistance-associated macrophage protein%3B pfam01566%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0481 SN35N_0482 SN35N_0482 SN35N_0482 494379 494606 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0482 SN35N_0483 SN35N_0483 SN35N_0483 495205 496041 + metallo-phosphoesterase calcineurin-like phosphoesterase superfamily domain%3B pfam12850%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metallo-phosphoesterase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0483 SN35N_0484 SN35N_0484 SN35N_0484 496156 496674 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~acetyltransferases%2C including N-acetylases of ribosomal proteins [translation%2C ribosomal structure and biogenesis]%3B COG1670%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0484 SN35N_0485 SN35N_0485 SN35N_0485 496866 497387 - hypothetical protein hypothetical protein zj316_1306 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0485 SN35N_0486 SN35N_0486 SN35N_0486 497582 498655 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus helveticus DPC 4571]%3B~organism:Lactobacillus helveticus DPC 4571%3B~xanthine/uracil/vitamin C permease [nucleotide transport and metabolism] gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0486 SN35N_0487 SN35N_0487 SN35N_0487 498658 499200 + purine/pyrimidine phosphoribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~purine/pyrimidine phosphoribosyltransferase [Lactobacillus plantarum ZJ316] gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0487 SN35N_0488 SN35N_0488 SN35N_0488 500551 500623 - tRNA-Asn identified by tRNAscan-SE%3B putative tRNA gene487 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0488 SN35N_0489 SN35N_0489 SN35N_0489 506547 508652 - membrane sulfatase%2C alkaline phosphatase superfamily protein identified by MetaGeneAnnotator%3B putative%3B~membrane sulfatase%2C alkaline phosphatase superfamily protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily [cell envelope biogenesis%2C outer membrane]%3B COG1368%3B~sulfatase%3B pfam00884 gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0489 SN35N_0490 SN35N_0490 SN35N_0490 508808 509044 - hypothetical protein hypothetical protein zj316_1302 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1797)%3B pfam08796 gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0490 SN35N_0491 SN35N_0491 araT1 araT1 509236 510423 + aromatic amino acid specific aminotransferase aromatic amino acid aminotransferase%3B validated%3B~aromatic amino acid specific aminotransferase [Lactobacillus plantarum ZJ316]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0491 SN35N_0492 SN35N_0492 dacA2 dacA2 510584 511822 - serine-type D-Ala-D-Ala carboxypeptidase D-alanyl-D-alanine carboxypeptidase%3B pfam00768%3B~beta-lactamase enzyme family%3B cl17872%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum ZJ316] gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0492 SN35N_0493 SN35N_0493 SN35N_0493 511886 512941 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~uncharacterized protein family (UPF0104)%3B pfam03706 gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0493 SN35N_0494 SN35N_0494 SN35N_0494 512945 513967 - glycosyltransferase glycosyltransferase [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0494 SN35N_0495 SN35N_0495 SN35N_0495 514043 515221 - 1%2C2-diacylglycerol 3-glucosyltransferase 1%2C2-diacylglycerol 3-glucosyltransferase [Lactobacillus plantarum ZJ316]%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative ADP-binding pocket [chemical binding] gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0495 SN35N_0496 SN35N_0496 SN35N_0496 515761 517491 - phosphoenolpyruvate-protein phosphotransferase PEP-utilising enzyme%2C N-terminal%3B pfam05524%3B~PEP-utilising enzyme%2C mobile domain%3B cl01586%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [carbohydrate transport and metabolism]%3B COG1080%3B~phosphoenolpyruvate-protein phosphotransferase [Enterococcus casseliflavus EC20] gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0496 SN35N_0497 SN35N_0497 SN35N_0497 517491 517757 - phosphocarrier protein HPr COG1925 phosphotransferase system%2C HPr-related proteins%3B~dimerization domain swap beta strand [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~phosphocarrier protein HPr [Lactobacillus amylovorus GRL 1112]%3B~regulatory phosphorylation site [posttranslational modification]%3B~regulatory protein interface [polypeptide binding] gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0497 SN35N_0498 SN35N_0498 SN35N_0498 517907 518104 - hypothetical protein hypothetical protein zj316_1294 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0498 SN35N_0499 SN35N_0499 clpE clpE 518740 520806 + ATP-dependent Clp protease%2C ATP-binding subunit ClpE ATP binding site [chemical binding]%3B~ATP-dependent Clp protease%2C ATP-binding subunit Clp E [Lactobacillus plantarum ZJ316]%3B~ATPases associated with a variety of cellular activities%3B smart00382%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B pfam10431%3B~UvrB/uvrC motif%3B pfam02151%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A motif%3B~walker B motif gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0499 SN35N_0500 SN35N_0500 SN35N_0500 520921 521472 - integrase/recombinase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase/recombinase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0500 SN35N_0501 SN35N_0501 SN35N_0501 521666 522055 - transcription regulator%2C MarR family MarR family%3B pfam12802%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0501 SN35N_0502 SN35N_0502 SN35N_0502 522596 523561 - peptide ABC transporter ATP-binding protein ABC transporter signature motif%3B~ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component [amino acid transport and metabolism / inorganic ion transport and metabolism]%3B COG1124%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of nickel/oligopeptides specific transporters%3B cd03257%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide/dipeptide transporter%2C C-terminal region%3B cl07097%3B~organism:Listeria monocytogenes%3B~peptide ABC transporter ATP-binding protein [Listeria monocytogenes]%3B~walker A/P-loop%3B~walker B gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0502 SN35N_0503 SN35N_0503 SN35N_0503 523568 524647 - peptide ABC transporter substrate-binding protein ABC transporter signature motif%3B~ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component [amino acid transport and metabolism / inorganic ion transport and metabolism]%3B COG0444%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of nickel/oligopeptides specific transporters%3B cd03257%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide/dipeptide transporter%2C C-terminal region%3B cl07097%3B~organism:Listeria monocytogenes%3B~peptide ABC transporter substrate-binding protein [ Listeria monocytogenes]%3B~walker A/P-loop%3B~walker B gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0503 SN35N_0504 SN35N_0504 SN35N_0504 524663 525697 - oligopeptide transport system permease protein ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide transport system permease protein [Lactobacillus helveticus DPC 4571]%3B~organism:Lactobacillus helveticus DPC 4571%3B~putative PBP binding loops gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0504 SN35N_0505 SN35N_0505 SN35N_0505 525701 526630 - oligopeptide ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~ABC-type dipeptide/oligopeptide/nickel transport systems%2C permease components [amino acid transport and metabolism / inorganic ion transport and metabolism]%3B COG0601%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide ABC transporter%2C permease protein [Lactobacillus helveticus DPC 4571]%3B~organism:Lactobacillus helveticus DPC 4571%3B~putative PBP binding loops gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0505 SN35N_0506 SN35N_0506 oppA oppA 526788 528431 - oligopeptide ABC transporter%2C substrate binding protein ABC-type oligopeptide transport system%2C periplasmic component [amino acid transport and metabolism]%3B COG4166%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0506 SN35N_0507 SN35N_0507 SN35N_0507 528978 529358 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF1634)%3B pfam07843 gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0507 SN35N_0508 SN35N_0508 SN35N_0508 529358 530203 - anion exporter%2C TauE/SafE family anion exporter%2C TauE/SafE family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sulfite exporter TauE/SafE%3B pfam01925 gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0508 SN35N_0509 SN35N_0509 SN35N_0509 530432 531313 - transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0509 SN35N_0510 SN35N_0510 SN35N_0510 531454 532479 + hypothetical protein cell-wall surface anchor repeat%3B pfam13461%3B~hypothetical protein zj316_1282 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0510 SN35N_0511 SN35N_0511 SN35N_0511 532569 534017 - extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0511 SN35N_0512 SN35N_0512 SN35N_0512 534901 536478 - peptide chain release factor 3 GTP/Mg2+ binding site [chemical binding]%3B~Release Factor 3 (RF3) protein involved in the terminal step of translocation in bacteria%3B cd04169%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~peptide chain release factor 3 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~peptide chain release factor 3%3B provisional%3B PRK00741%3B~putative GEF interaction site [polypeptide binding] gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0512 SN35N_0513 SN35N_0513 SN35N_0513 536776 538098 + glutathione reductase NAD(P)-binding rossmann-like domain%3B cl17500%3B~glutathione reductase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes [energy production and conversion]%3B COG1249 gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0513 SN35N_0514 SN35N_0514 SN35N_0514 538269 539165 + 6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase [Pediococcus acidilactici 7_4]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4%3B~predicted 6-phosphogluconate dehydrogenase [carbohydrate transport and metabolism]%3B COG1023%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0514 SN35N_0515 SN35N_0515 gntK gntK 539181 540695 + gluconokinase ATP binding site [chemical binding]%3B~N- and C-terminal domain interface [polypeptide binding]%3B~carbohydrate binding site [chemical binding]%3B~catalytic site [active]%3B~gluconate kinase%2C FGGY type%3B TIGR01314%3B~gluconate kinases%3B a subfamily of the FGGY family of carbohydrate kinases%3B cd07770%3B~gluconokinase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0515 SN35N_0516 SN35N_0516 SN35N_0516 540707 542062 + H+/gluconate symporter related permease GntP family permease%3B pfam02447%3B~H+/gluconate symporter related permease [Lactobacillus brevis ATCC 367]%3B~fructuronate transporter%3B provisional%3B cl15264%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 367 gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0516 SN35N_0517 SN35N_0517 SN35N_0517 542227 542625 - glycerol-3-phosphate cytidylyltransferase cytidylyltransferase%3B pfam01467%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~glycerol-3-phosphate cytidylyltransferase [Listeria monocytogenes]%3B~glycerol-3-phosphate cytidylyltransferase%3B cd02171%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0517 SN35N_0518 SN35N_0518 SN35N_0518 542678 543871 - transport protein%2C DUF20 family domain of unknown function DUF20%3B pfam01594%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted permease%2C member of the PurR regulon [general function prediction only]%3B COG0628%3B~transport protein%2C DUF20 family [Lactobacillus plantarum ZJ316] gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0518 SN35N_0519 SN35N_0519 hic1 hic1 544035 544961 + L-lactate/malate dehydrogenase L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases%3B cd05291%3B~L-lactate dehydrogenase%3B TIGR01771%3B~L-lactate/malate dehydrogenase [Lactobacillus buchneri CD034]%3B~NAD binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri CD034%3B~substrate binding site [chemical binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0519 SN35N_0520 SN35N_0520 isp2 isp2 545153 546073 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0520 SN35N_0521 SN35N_0521 isp2 isp2 546113 546865 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1] gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0521 SN35N_0522 SN35N_0522 SN35N_0522 546858 547052 - hypothetical protein hypothetical protein zj316_1272 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoribosylformylglycinamidine (FGAM) synthase%2C synthetase domain [nucleotide transport and metabolism]%3B COG0046 gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0522 SN35N_0523 SN35N_0523 SN35N_0523 547206 547583 - transcription regulator helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0523 SN35N_0524 SN35N_0524 SN35N_0524 547759 548490 + gamma-D-glutamate-meso-diaminopimelate muropeptidase NlpC/P60 family%3B pfam00877%3B~extracellular protein%2C gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0524 SN35N_0525 SN35N_0525 SN35N_0525 548703 549251 - UPF0374 protein UPF0374 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0525 SN35N_0526 SN35N_0526 recX recX 549349 550152 - regulatory protein RecX identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~recombination regulator RecX%3B provisional%3B PRK14135%3B~regulatory protein RecX [Lactobacillus plantarum ZJ316] gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0526 SN35N_0527 SN35N_0527 SN35N_0527 550185 550901 - hypothetical protein hypothetical protein zj316_1267 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0527 SN35N_0528 SN35N_0528 SN35N_0528 551178 551726 + hypothetical protein RNA polymerase sigma factor%2C sigma-70 family%3B TIGR02937%3B~hypothetical protein zj316_1266 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sigma-70 region 2%3B pfam04542 gene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0528 SN35N_0529 SN35N_0529 SN35N_0529 551762 551956 + hypothetical protein hypothetical protein zj316_1265 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0529 SN35N_0530 SN35N_0530 SN35N_0530 552071 552283 + hypothetical protein hypothetical protein zj316_1264 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0530 SN35N_0531 SN35N_0531 SN35N_0531 552313 552540 + hypothetical protein hypothetical protein zj316_1263 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2922)%3B pfam11148 gene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0531 SN35N_0532 SN35N_0532 SN35N_0532 552642 552947 - hypothetical protein hypothetical protein zj316_1262 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0532 SN35N_0533 SN35N_0533 SN35N_0533 553806 554483 + lipopolysaccharide synthesis sugar transferase bacterial sugar transferase%3B cl00939%3B~identified by MetaGeneAnnotator%3B putative%3B~lipopolysaccharide synthesis sugar transferase [Lactobacillus gasseri ATCC 33323]%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0533 SN35N_0534 SN35N_0534 SN35N_0534 554920 556338 + polysaccharide biosynthesis protein Wzx%2C a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins%3B cd13128%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein involved in the export of O-antigen and teichoic acid [general function prediction only]%3B COG2244%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~polysaccharide biosynthesis protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0534 SN35N_0535 SN35N_0535 cps3J cps3J 556528 557304 - capsular biosynthesis protein capsular biosynthesis protein [Lactobacillus plantarum ZJ316]%3B~domain of unknown function (DUF4422)%3B pfam14393%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0535 SN35N_0536 SN35N_0536 cps3I cps3I 557440 558519 - O-acetyltransferase O-acetyltransferase [Lactobacillus plantarum ZJ316]%3B~acyltransferase family%3B pfam01757%3B~fucose 4-O-acetylase and related acetyltransferases [carbohydrate transport and metabolism]%3B COG3594%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0536 SN35N_0537 SN35N_0537 cps3H cps3H 558503 559612 - polysaccharide biosynthesis protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide biosynthesis protein [Lactobacillus plantarum ZJ316] gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0537 SN35N_0538 SN35N_0538 cps3F cps3F 559609 560829 - polysaccharide polymerase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~polysaccharide polymerase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0538 SN35N_0539 SN35N_0539 cps3E cps3E 560816 561439 - polysaccharide biosynthesis protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~polysaccharide biosynthesis protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0539 SN35N_0540 SN35N_0540 cps3D cps3D 561445 562533 - polysaccharide biosynthesis protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~polysaccharide biosynthesis protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0540 SN35N_0541 SN35N_0541 glf2 glf2 562594 563727 - UDP-galactopyranose mutase NAD(P)-binding rossmann-like domain%3B pfam13450%3B~UDP-galactopyranose mutase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~UDP-galactopyranose mutase [cell envelope biogenesis%2C outer membrane]%3B COG0562%3B~UDP-galactopyranose mutase%3B pfam03275%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0541 SN35N_0542 SN35N_0542 cps3B cps3B 564240 565172 - glycosyltransferase%2C family 2 glycosyltransferase%2C family 2 [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted glycosyltransferases [general function prediction only]%3B~probable catalytic site%3B~subfamily of glycosyltransferase family GT2 of unknown function%3B cd04185 gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0542 SN35N_0543 SN35N_0543 cps3A cps3A 565206 566114 - glycosyltransferase glycosyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted glycosyltransferases [general function prediction only]%3B~probable catalytic site%3B~subfamily of glycosyltransferase family GT2 of unknown function%3B cd04185 gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0543 SN35N_0544 SN35N_0544 SN35N_0544 566401 567939 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain ATCC BAA-7 93 / NCIMB 8826 / WCFS1) gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0544 SN35N_0545 SN35N_0545 SN35N_0545 568371 568658 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 4_3 gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0545 SN35N_0546 SN35N_0546 SN35N_0546 568978 569847 - glucose-1-phosphate thymidylyltransferase G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase%3B cd02538%3B~derived by automated computational analysis using gene prediction method: GeneMarkS+.%3B~glucose-1-phosphate thymidylyltransferase [Listeria monocytogenes]%3B~glucose-1-phosphate thymidylyltransferase%2C short form%3B TIGR01207%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~substrate binding site%3B~tetramer interface gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0546 SN35N_0547 SN35N_0547 SN35N_0547 569872 571293 - teichoic acid/polysaccharide export protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus sakei subsp. sakei LS25 gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0547 SN35N_0548 SN35N_0548 SN35N_0548 571286 572320 - CDP-glycerol:poly(glycerophosphate) glycerophosp hotransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0548 SN35N_0549 SN35N_0549 SN35N_0549 572424 573137 - glycosyltransferase-like protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0549 SN35N_0550 SN35N_0550 SN35N_0550 573134 573943 - glycosyltransferase%2C family 2 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei UCD174 gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0550 SN35N_0551 SN35N_0551 SN35N_0551 573947 575203 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0551 SN35N_0552 SN35N_0552 SN35N_0552 575219 576088 - rhamnosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fabifermentans T30PCM01 gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0552 SN35N_0553 SN35N_0553 SN35N_0553 576301 576957 - undecaprenyl-phosphate galactose phosphotransferase COG: COG2148%3B~bacterial sugar transferase%3B pfam02397%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri I5007%3B~undecaprenyl-phosphate galactose phosphotransferase [Lactobacillus reuteri I5007] gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0553 SN35N_0554 SN35N_0554 cps2C cps2C 577007 577843 - polysaccharide biosynthesis protein%2C phosphotyrosine-protein phosphatase capsular polysaccharide biosynthesis protein [carbohydrate transport and metabolism / cell envelope biogenesis%2C outer membrane]%3B COG4464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~polymerase and histidinol phosphatase domain%3B cl17102%3B~polysaccharide biosynthesis protein%2C phosphotyrosine -protein phosphatase [Lactobacillus plantarum WCFS1] gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0554 SN35N_0555 SN35N_0555 cps2B cps2B 577767 578495 - polysaccharide biosynthesis protein%2C regulator capsular exopolysaccharide family%3B TIGR01007%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide biosynthesis protein%2Cregulator [Lactobacillus plantarum ZJ316] gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0555 SN35N_0556 SN35N_0556 cps2A cps2A 578507 579274 - polysaccharide biosynthesis protein%2C chain length regulator chain length determinant protein%3B cl15801%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide biosynthesis protein%2C chain length regulator [Lactobacillus plantarum ZJ316] gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0556 SN35N_0557 SN35N_0557 SN35N_0557 579634 580230 + integrase/recombinase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase/recombinase [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0557 SN35N_0558 SN35N_0558 cps2I cps2I 580323 581846 + transporter identified by MetaGeneAnnotator%3B putative%3B~multidrug and toxic compound extrusion family and similar proteins%3B cl09326%3B~organism:Lactobacillus plantarum JDM1%3B~transporter [Lactobacillus plantarum JDM1] gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0558 SN35N_0559 SN35N_0559 SN35N_0559 581928 582770 - dTDP-4-dehydrorhamnose reductase COG1091 dTDP-4-dehydrorhamnose reductase%3B~NADP binding site [chemical binding]%3B~RmlD substrate binding domain%3B pfam04321%3B~dTDP-4-dehydrorhamnose reductase [Leuconostoc sp. C2]%3B~dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins%2C extended (e) SDRs%3B cd05254%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc sp. C2%3B~putative substrate binding site [chemical binding] gene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0559 SN35N_0560 SN35N_0560 cpsN cpsN 582840 583868 - dTDP-glucose 4%2C6-dehydratase RmlB NAD binding site [chemical binding]%3B~dTDP-D-glucose 4%2C6-dehydratase [cell envelope biogenesis%2C outer membrane]%3B COG1088%3B~dTDP-D-glucose 4%2C6-dehydratase%2C extended (e) SDRs%3B cd05246%3B~dTDP-glucose 4%2C6-dehydratase RmlB [Streptococcus pneumoniae G54]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae G54%3B~resistant to macrolides and tetracylcine%3B~substrate binding site [chemical binding] gene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0560 SN35N_0561 SN35N_0561 SN35N_0561 583878 584459 - dTDP-4-dehydrorhamnose 3%2C5-epimerase dTDP-4-dehydrorhamnose 3%2C5-epimerase [Lactobacillus rhamnosus GG]%3B~dTDP-4-dehydrorhamnose 3%2C5-epimerase%3B pfam00908%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0561 SN35N_0562 SN35N_0562 SN35N_0562 584463 585332 - glucose-1-phosphate thymidylyltransferase G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase%3B cd02538%3B~derived by automated computational analysis using gene prediction method: GeneMarkS+.%3B~glucose-1-phosphate thymidylyltransferase [Listeria monocytogenes]%3B~glucose-1-phosphate thymidylyltransferase%2C short form%3B TIGR01207%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~substrate binding site%3B~tetramer interface gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0562 SN35N_0563 SN35N_0563 SN35N_0563 585349 586947 - glycosylhydrolase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0563 SN35N_0564 SN35N_0564 SN35N_0564 586910 587659 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0564 SN35N_0565 SN35N_0565 SN35N_0565 588992 590314 - glycosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0565 SN35N_0566 SN35N_0566 SN35N_0566 590311 591489 - rhamnosyl transferase WchF identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0566 SN35N_0567 SN35N_0567 SN35N_0567 591494 592186 - dTDP-glucose 4%2C6-dehydratase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0567 SN35N_0568 SN35N_0568 SN35N_0568 592170 593342 - CDP-glycerol:poly(glycerophosphate) glycerophosp hotransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0568 SN35N_0569 SN35N_0569 SN35N_0569 593342 594313 - family 2 glycosyl transferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0569 SN35N_0570 SN35N_0570 SN35N_0570 594349 595497 - serine-type D-Ala-D-Ala carboxypeptidase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0570 SN35N_0571 SN35N_0571 SN35N_0571 595838 597421 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0571 SN35N_0572 SN35N_0572 SN35N_0572 597451 597588 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0572 SN35N_0573 SN35N_0573 SN35N_0573 597835 598167 + XRE family transcriptional regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0573 SN35N_0574 SN35N_0574 SN35N_0574 598160 598564 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0574 SN35N_0575 SN35N_0575 glpF4 glpF4 598759 599475 - glycerol uptake facilitator protein Asn-Pro-Ala signature motifs%3B~amphipathic channel%3B~glycerol uptake facilitator and related permeases [carbohydrate transport and metabolism]%3B COG0580%3B~glycerol uptake facilitator protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0575 SN35N_0576 SN35N_0576 rbn rbn 599665 600594 - ribonuclease BN identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribonuclease BN [Lactobacillus plantarum ZJ316]%3B~virulence factor BrkB%3B pfam03631 gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0576 SN35N_0577 SN35N_0577 SN35N_0577 600980 602098 - UDP-N-acetylglucosamine 2-epimerase UDP-N-acetylglucosamine 2-epimerase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~UDP-N-acetylglucosamine 2-epimerase%3B TIGR00236%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0577 SN35N_0578 SN35N_0578 pbpX1 pbpX1 602287 603459 - serine-type D-Ala-D-Ala carboxypeptidase beta-lactamase class C and other penicillin binding proteins [defense mechanisms]%3B COG1680%3B~beta-lactamase%3B pfam00144%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum WCFS1] gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0578 SN35N_0579 SN35N_0579 SN35N_0579 603730 605076 + NADP-specific glutamate dehydrogenase Glu/Leu/Phe/Val dehydrogenase%2C dimerisation domain%3B pfam02812%3B~NAD(P) binding domain of glutamate dehydrogenase%2C subgroup 2%3B cd05313%3B~NAD(P) binding site [chemical binding]%3B~NADP-specific glutamate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~glutamate dehydrogenase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0579 SN35N_0580 SN35N_0580 SN35N_0580 605158 605994 - transposase HTH-like domain%3B pfam13276%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13683%3B~organism:Lactobacillus plantarum ZJ316%3B~putative transposase OrfB%3B reviewed%3B~transposase [Lactobacillus plantarum ZJ316] gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0580 SN35N_0581 SN35N_0581 SN35N_0581 606042 606749 - transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase [Lactobacillus plantarum ZJ316]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~transposase%3B cl17663 gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0581 SN35N_0582 SN35N_0582 SN35N_0582 606866 607429 - hypothetical protein hypothetical protein zj316_1197 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0582 SN35N_0583 SN35N_0583 SN35N_0583 607864 608304 - hypothetical protein hypothetical protein zj316_1196 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0583 SN35N_0584 SN35N_0584 SN35N_0584 608854 609720 - cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase%2C DUF915 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0584 SN35N_0585 SN35N_0585 pts14C pts14C 609713 611020 - PTS system%2C cellobiose-specific EIIC component PTS system%2C cellobiose-specific EIIC component [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455%3B~phosphotransferase system%2C EIIC%3B pfam02378 gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0585 SN35N_0586 SN35N_0586 SN35N_0586 611154 611594 + nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0586 SN35N_0587 SN35N_0587 rhe2 rhe2 611877 613211 - ATP-dependent RNA helicase ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent RNA helicase [Lactobacillus plantarum subsp. plantarum P-8]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cl17251%3B~DEAD-like helicases superfamily%3B smart00487%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative Mg++ binding site [ion binding] gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0587 SN35N_0588 SN35N_0588 SN35N_0588 613224 614231 - oxidoreductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase family%2C NAD-binding rossmann fold%3B pfam01408%3B~oxidoreductase[Lactobacillus plantarum JDM1]%3B~predicted dehydrogenases and related proteins [general function prediction only]%3B COG0673 gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0588 SN35N_0589 SN35N_0589 cspL cspL 614417 614617 - cold shock protein CspL DNA-binding site [nucleotide binding]%3B~RNA-binding motif%3B~cold shock protein CspL [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0589 SN35N_0590 SN35N_0590 SN35N_0590 614961 615326 + extracellular protein%2C membrane-bound extracellular protein%2C membrane-bound [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0590 SN35N_0591 SN35N_0591 lys lys 615482 616258 - lysozyme identified by MetaGeneAnnotator%3B putative%3B~lysozyme[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0591 SN35N_0592 SN35N_0592 SN35N_0592 616283 617161 - transcription regulator helix-turn-helix domain%2C rpiR family%3B pfam01418%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative active site [active]%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators [transcription]%3B COG1737 gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0592 SN35N_0593 SN35N_0593 SN35N_0593 617286 618170 - cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase%2C DUF915 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0593 SN35N_0594 SN35N_0594 SN35N_0594 618163 619479 - cellobiose PTS%2C EIIC cellobiose PTS%2C EIIC [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0594 SN35N_0595 SN35N_0595 SN35N_0595 619728 622067 - P-ATPase superfamily cation transporter E1-E2 ATPase%3B pfam00122%3B~P-ATPase superfamily cation transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~cation transport ATPase [inorganic ion transport and metabolism]%3B COG0474%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~soluble P-type ATPase [general function prediction only] gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0595 SN35N_0596 SN35N_0596 SN35N_0596 622334 622909 - transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator[Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0596 SN35N_0597 SN35N_0597 SN35N_0597 623366 624739 - RNA methyltransferase RNA methyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~S-adenosylmethionine binding site [chemical binding]%3B~SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [translation%2C ribosomal structure and biogenesis]%3B COG2265%3B~TRAM domain%3B pfam01938%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0597 SN35N_0598 SN35N_0598 SN35N_0598 625073 626095 - diacylglycerol kinase diacylglycerol kinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~diacylglycerol kinase catalytic domain%3B cl01255%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative lipid kinase%3B reviewed gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0598 SN35N_0599 SN35N_0599 SN35N_0599 626200 627624 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B GatB domain%3B cl11497%3B~GatB/GatE catalytic domain%3B pfam02934%3B~aspartyl/glutamyl-tRNA amidotransferase subunit B%3B validated%3B PRK05477%3B~aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase su bunit B [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0599 SN35N_0600 SN35N_0600 SN35N_0600 627624 629087 - glutamyl-tRNA(Gln) amidotransferase subunit A Amidase%3B cl11426%3B~Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [translation%2C ribosomal structure and biogenesis]%3B COG0154%3B~glutamyl-tRNA(Gln) amidotransferase subunit A [Enterococcus casseliflavus EC20]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0600 SN35N_0601 SN35N_0601 gatC gatC 629087 629407 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C aspartyl/glutamyl-tRNA amidotransferase subunit C%3B reviewed%3B PRK00034%3B~aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase su bunit C [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0601 SN35N_0602 SN35N_0602 SN35N_0602 629448 630623 - lipoprotein C-terminal repeat domain of CamS sex pheromone cAM373 precursor%3B cd13440%3B~CamS sex pheromone cAM373 precursor%3B pfam07537%3B~N-terminal repeat domain of CamS sex pheromone cAM373 precursor%3B cd13441%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative dimer interface [polypeptide binding] gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0602 SN35N_0603 SN35N_0603 ligA ligA 630620 632659 - DNA ligase DNA ligase [Lactobacillus plantarum subsp. plantarum P-8]%3B~K-X-D-G motif%3B~NAD-dependent DNA ligase C4 zinc finger domain%3B pfam03119%3B~NAD-dependent DNA ligase LigA%3B validated%3B PRK07956%3B~NAD-dependent DNA ligase OB-fold domain%3B pfam03120%3B~catalytic site [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding pocket [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0603 SN35N_0604 SN35N_0604 SN35N_0604 632676 634943 - ATP-dependent DNA helicase PcrA ATP-dependent DNA helicase PcrA [Enterococcus casseliflavus EC20]%3B~ATP-dependent DNA helicase PcrA%3B TIGR01073%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~family description%3B cl15862%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0604 SN35N_0605 SN35N_0605 purK2 purK2 635384 636553 - phosphoribosylaminoimidazole carboxylase ATPase subunit ATP-grasp domain%3B cl17255%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoribosylaminoimidazole carboxylase ATPase subunit [Lactobacillus plantarum ZJ316] gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0605 SN35N_0606 SN35N_0606 SN35N_0606 636666 637214 - UPF0316 protein UPF0316 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2179)%3B pfam10035 gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0606 SN35N_0607 SN35N_0607 SN35N_0607 637237 637824 - xanthine phosphoribosyltransferase derived by automated computational analysis using gene prediction method: GeneMarkS+.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~xanthine phosphoribosyltransferase [Listeria monocytogenes] gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0607 SN35N_0608 SN35N_0608 acm1 acm1 637875 638513 - cell wall hydrolase/muramidase cell wall hydrolase/muramidase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~muramidase (flagellum-specific) [cell motility and secretion / intracellular trafficking and secretion]%3B COG1705%3B~organism:Lactobacillus plantarum ZJ316 gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0608 SN35N_0609 SN35N_0609 SN35N_0609 638963 639937 + oxidoreductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~oxidoreductase family%2C NAD-binding rossmann fold%3B pfam01408%3B~predicted dehydrogenases and related proteins [general function prediction only]%3B COG0673 gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0609 SN35N_0610 SN35N_0610 SN35N_0610 640151 641065 - 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase [Lactobacillus plantarum WCFS1]%3B~1%2C4-dihydroxy-2-naphthoate octaprenyltransferase%3B validated%3B~UbiA prenyltransferase family%3B pfam01040%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0610 SN35N_0611 SN35N_0611 hepB2 hepB2 641210 642187 + trans-hexaprenyltranstransferase%2C component II active site lid residues [active]%3B~aspartate-rich region 1%3B~aspartate-rich region 2%3B~catalytic residues [active]%3B~chain length determination region%3B~geranylgeranyl pyrophosphate synthase [coenzyme metabolism]%3B COG0142%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding]%3B~substrate-Mg2+ binding site%3B~trans-hexaprenyltranstransferase%2C component II [Lactobacillus plantarum subsp. plantarum P-8]%3B~trans-isoprenyl diphosphate synthases%2C head-to-tail%3B cd00685 gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0611 SN35N_0612 SN35N_0612 SN35N_0612 642377 643354 + hypothetical protein hypothetical protein zj316_1164 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0612 SN35N_0613 SN35N_0613 cydD cydD 643560 645320 - cytochrome D ABC transporter ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of CydCD%2C subfamily C%3B cd03247%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cytochrome D ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0613 SN35N_0614 SN35N_0614 cydC cydC 645320 647053 - cytochrome D ABC transporter ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cytochrome D ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0614 SN35N_0615 SN35N_0615 cydB cydB 647182 648177 - cytochrome D ubiquinol oxidase subunit II cytochrome D ubiquinol oxidase%2C subunit II [Lactobacillus plantarum subsp. plantarum P-8]%3B~cytochrome d ubiquinol oxidase subunit 2%3B provisional%3B cl12219%3B~cytochrome oxidase subunit II%3B pfam02322%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0615 SN35N_0616 SN35N_0616 SN35N_0616 648170 649609 - cytochrome bd-type quinol oxidase subunit 1 bacterial cytochrome Ubiquinol Oxidase%3B cl00562%3B~cytochrome bd-type quinol oxidase%2C subunit 1 [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0616 SN35N_0617 SN35N_0617 SN35N_0617 650034 652721 + cell surface hydrolase KxYKxGKxW signal peptide%3B TIGR03715%3B~cell surface hydrolase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [general function prediction only]%3B COG0596 gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0617 SN35N_0618 SN35N_0618 SN35N_0618 652793 652969 + hypothetical protein hypothetical protein zj316_1157 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0618 SN35N_0619 SN35N_0619 SN35N_0619 653062 653643 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted membrane protein [function unknown]%3B~protein of unknown function (DUF3816)%3B pfam12822 gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0619 SN35N_0620 SN35N_0620 SN35N_0620 653764 655191 - amino acid transport protein C-terminus of AA_permease%3B pfam13906%3B~amino acid transport protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~amino acid transporter%3B TIGR00909%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0620 SN35N_0621 SN35N_0621 mleP2 mleP2 655693 656664 - malate transport protein identified by MetaGeneAnnotator%3B putative%3B~malate transport protein [Lactobacillus plantarum WCFS1]%3B~membrane transport protein%3B cl09117%3B~organism:Lactobacillus plantarum WCFS1 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0621 SN35N_0622 SN35N_0622 SN35N_0622 656706 658349 - malolactic enzyme NAD(P) binding domain of malic enzyme (ME)%2C subgroup 1%3B cd05312%3B~NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~malate dehydrogenase%3B provisional%3B~malic enzyme%2C N-terminal domain%3B pfam00390%3B~malolactic enzyme [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0622 SN35N_0623 SN35N_0623 mleR1 mleR1 658617 659426 + malolactic regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~malolactic regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcriptional regulator [transcription]%3B COG0583 gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0623 SN35N_0624 SN35N_0624 mleR2 mleR2 659603 660484 - malolactic regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~malolactic regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcriptional regulator [transcription]%3B COG0583 gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0624 SN35N_0625 SN35N_0625 SN35N_0625 660481 661017 - apo-citrate lyase phosphoribosyl-dephospho-CoA transferase apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [Lactobacillus plantarum 16]%3B~apo-citrate lyase phosphoribosyl-dephospho-CoA transferase%3B pfam03802%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0625 SN35N_0626 SN35N_0626 SN35N_0626 661182 662570 - fumarate reductase%2C flavoprotein subunit flavocytochrome c%3B TIGR01813%3B~fumarate reductase%2C flavoprotein subunit [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0626 SN35N_0627 SN35N_0627 fumC fumC 662743 664125 - fumarate hydratase class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle%3B~class II fumarases%3B cd01362%3B~fumarate hydratase [Lactobacillus helveticus DPC 4571]%3B~fumarate hydratase%3B reviewed%3B PRK00485%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~tetramer interface [polypeptide binding] gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0627 SN35N_0628 SN35N_0628 SN35N_0628 664600 664818 - reverse transcriptase/maturase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri JCM 1112%3B~reverse transcriptase/maturase [Lactobacillus reuteri JCM 1112]%3B~type strain ofLactobacillus reuteri JCM 1112 gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0628 SN35N_0629 SN35N_0629 SN35N_0629 664973 665539 - RNA-directed DNA polymerase COG: COG3344%3B~RNA-directed DNA polymerase [Lactobacillus reuteri SD2112]%3B~group II intron%2C maturase-specific domain%3B pfam08388%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri SD2112%3B~putative NTP binding site [chemical binding]%3B~putative active site [active]%3B~putative nucleic acid binding site [nucleotide binding]%3B~reverse transcriptase (RNA-dependent DNA polymerase)%3B pfam00078 gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0629 SN35N_0630 SN35N_0630 SN35N_0630 665830 665973 - hypothetical protein hypothetical protein zj316_1146 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0630 SN35N_0631 SN35N_0631 isp2 isp2 666266 668038 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0631 SN35N_0632 SN35N_0632 flhB flhB 668322 668558 - flagellar biosynthetic protein FlhB flagellar biosynthesis protein FlhB%3B reviewed%3B PRK05702%3B~flagellar biosynthetic protein FlhB [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0632 SN35N_0633 SN35N_0633 SN35N_0633 668561 668821 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0633 SN35N_0634 SN35N_0634 SN35N_0634 668820 669548 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene633 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0634 SN35N_0635 SN35N_0635 SN35N_0635 669877 670875 + integrase catalytic subunit helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase catalytic subunit [Lactobacillus casei LC2W]%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus casei LC2W%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0635 SN35N_0636 SN35N_0636 SN35N_0636 670946 672484 - citrate lyase alpha chain citrate lyase alpha chain [Lactobacillus helveticus DPC 4571]%3B~citrate lyase%2C alpha subunit%3B TIGR01584%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0636 SN35N_0637 SN35N_0637 SN35N_0637 672474 673388 - citrate lyase%2C beta chain HpcH/HpaI aldolase/citrate lyase family%3B cl17231%3B~citrate lyase%2C beta chain [Lactobacillus fermentum F-6]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fermentum F-6 gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0637 SN35N_0638 SN35N_0638 SN35N_0638 673388 673678 - citrate lyase subunit gamma acyl carrier protein%3B with CitE and CitF catalyzes the formation of oxaloacetate from citrate%3B~citrate lyase subunit gamma [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~malonate decarboxylase delta subunit (MdcD)%3B cl06082%3B~organism:Lactobacillus helveticus DPC 4571 gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0638 SN35N_0639 SN35N_0639 citC citC 673668 674723 - (citrate (pro-3S)-lyase) ligase (T/H)XGH motif%3B~(citrate (pro-3S)-lyase) ligase [Lactobacillus plantarum JDM1]%3B~[citrate (pro-3S)-lyase] ligase%3B TIGR00124%3B~citrate lyase ligase%3B cd02169%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative active site [active] gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0639 SN35N_0640 SN35N_0640 mae mae 674741 675901 - malic enzyme%2C NAD-dependent NAD(P) binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~malic enzyme [energy production and conversion]%3B COG0281%3B~malic enzyme%2C N-terminal domain%3B pfam00390%3B~malic enzyme%2C NAD binding domain%3B smart00919%3B~malic enzyme%2C NAD-dependent [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0640 SN35N_0641 SN35N_0641 citR citR 676097 677059 + citrate lyase regulator%2C SorC family citrate lyase regulator%2C SorC family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative sugar-binding domain%3B pfam04198%3B~transcriptional regulator%2C contains sigma factor-related N-terminal domain [transcription]%3B COG2390 gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0641 SN35N_0642 SN35N_0642 SN35N_0642 677136 678554 - SA2486 protein SA2486 protein [Staphylococcus aureus subsp. aureus ST228]%3B~di- and tricarboxylate transporters [inorganic ion transport and metabolism]%3B COG0471%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228%3B~transmembrane helices gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0642 SN35N_0643 SN35N_0643 ldh2 ldh2 678586 679515 - L-lactate dehydrogenase 2 L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases%3B cd05291%3B~L-lactate dehydrogenase 2 [Lactobacillus plantarum ZJ316]%3B~L-lactate dehydrogenase%3B reviewed%3B PRK00066%3B~NAD binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0643 SN35N_0644 SN35N_0644 SN35N_0644 679912 680223 + hypothetical protein hypothetical protein zj316_1132 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0644 SN35N_0645 SN35N_0645 mtsA mtsA 680335 681237 - manganese/zinc ABC transporter%2C substrate binding protein ABC-type metal ion transport system%2C periplasmic component/surface adhesin [inorganic ion transport and metabolism]%3B COG0803%3B~identified by MetaGeneAnnotator%3B putative%3B~manganese/zinc ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0645 SN35N_0646 SN35N_0646 mtsB mtsB 681273 682148 - manganese ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~ABC-type Mn2+/Zn2+ transport systems%2C permease components [inorganic ion transport and metabolism]%3B COG1108%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~manganese ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative PBP binding regions gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0646 SN35N_0647 SN35N_0647 mtsC mtsC 682145 682882 - manganese ABC transporter%2C ATP-binding protein ABC-type Mn/Zn transport systems%2C ATPase component [inorganic ion transport and metabolism]%3B COG1121%3B~ATP-binding cassette domain of the metal-type transporters%3B cd03235%3B~identified by MetaGeneAnnotator%3B putative%3B~manganese ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0647 SN35N_0648 SN35N_0648 citG citG 683036 683878 - triphosphoribosyl-dephospho-CoA synthase catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~triphosphoribosyl-dephospho-CoA synthase CitG%3B TIGR03125%3B~triphosphoribosyl-dephospho-CoA synthase [Lactobacillus plantarum JDM1] gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0648 SN35N_0649 SN35N_0649 ttdR ttdR 684115 685140 + transcription regulator tartrate operon%2C AraC family cupin domain%3B pfam07883%3B~helix_turn_helix%2C arabinose operon control protein%3B smart00342%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcription regulator tartrate operon%2C AraC family [Lactobacillus plantarum WCFS1] gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0649 SN35N_0650 SN35N_0650 ttdA ttdA 685397 686329 + L(+)-tartrate dehydratase%2C subunit A L(+)-tartrate dehydratase%2C subunit A [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tartrate dehydratase subunit alpha%3B validated gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0650 SN35N_0651 SN35N_0651 ttdB ttdB 686326 686937 + L(+)-tartrate dehydratase%2C subunit B L(+)-tartrate dehydratase subunit beta%3B validated%3B~L(+)-tartrate dehydratase%2C subunit B [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0651 SN35N_0652 SN35N_0652 SN35N_0652 687001 687327 + hypothetical protein hypothetical protein zj316_1123 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted metal-sulfur cluster biosynthetic enzyme [general function prediction only]%3B COG2151 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0652 SN35N_0653 SN35N_0653 SN35N_0653 687431 688852 + cation transport protein cation transport protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~di- and tricarboxylate transporters [inorganic ion transport and metabolism]%3B COG0471%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transmembrane helices gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0653 SN35N_0654 SN35N_0654 SN35N_0654 689284 690363 - 3-dehydroquinate synthase 3-dehydroquinate synthase [Lactobacillus plantarum 16]%3B~dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis%3B cd08195%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum 16 gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0654 SN35N_0655 SN35N_0655 aroA aroA 690373 691368 - phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase 3-deoxy-7-phosphoheptulonate synthase%3B reviewed%3B~3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase [cell envelope biogenesis%2C outer membrane]%3B cl17225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phospho-2-dehydro-3-deoxyheptonate aldolase/chorism ate mutase [Lactobacillus plantarum ZJ316] gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0655 SN35N_0656 SN35N_0656 aroD1 aroD1 691409 692302 - shikimate 5-dehydrogenase NAD(P) binding domain of shikimate dehydrogenase%3B cd01065%3B~NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~shikimate 5-dehydrogenase [Lactobacillus plantarum WCFS1]%3B~shikimate 5-dehydrogenase%3B reviewed%3B PRK00258%3B~shikimate binding site%3B~shikimate dehydrogenase substrate binding domain%3B pfam08501 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0656 SN35N_0657 SN35N_0657 tkt2 tkt2 692322 694334 - transketolase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS)%2C transketolase (TK)%2C and related proteins%3B cd07033%3B~transketolase [Lactobacillus plantarum WCFS1]%3B~transketolase [carbohydrate transport and metabolism]%3B COG0021 gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0657 SN35N_0658 SN35N_0658 SN35N_0658 695204 696292 - malate/lactate dehydrogenase identified by MetaGeneAnnotator%3B putative%3B~malate/L-lactate dehydrogenase%3B cl00900%3B~malate/lactate dehydrogenase [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0658 SN35N_0659 SN35N_0659 SN35N_0659 696581 697669 + hypothetical protein hypothetical protein zj316_1115 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0659 SN35N_0660 SN35N_0660 SN35N_0660 697954 698823 + DegV family protein DegV family protein [Lactobacillus plantarum JDM1]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0660 SN35N_0661 SN35N_0661 rpsI rpsI 699121 699513 - 30S ribosomal protein S9 30S ribosomal protein S9 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S9%3B reviewed%3B PRK00132%3B~forms a direct contact with the tRNA during translation%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0661 SN35N_0662 SN35N_0662 SN35N_0662 699527 699970 - 50S ribosomal protein L13 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L13 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~L3 interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0662 SN35N_0663 SN35N_0663 truA truA 700079 700867 - tRNA pseudouridine synthase A dimerization interface 3.5A [polypeptide binding]%3B~eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA%3B cd02570%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~tRNA pseudouridine synthase A [Lactobacillus plantarum subsp. plantarum P-8]%3B~tRNA pseudouridine synthase A%3B validated%3B PRK00021 gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0663 SN35N_0664 SN35N_0664 SN35N_0664 700932 701732 - cobalt ABC transporter ATP-binding protein ABC-type cobalt transport system%2C permease component CbiQ and related transporters [inorganic ion transport and metabolism]%3B COG0619%3B~cobalt ABC transporter ATP-binding protein [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0664 SN35N_0665 SN35N_0665 SN35N_0665 701722 702609 - ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cobalt transporter ATP-binding subunit%3B provisional%3B PRK13634%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0665 SN35N_0666 SN35N_0666 ecfA1 ecfA1 702585 703427 - energy-coupling factor transporter ATP-binding protein EcfA 1 ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cobalt transporter ATP-binding subunit%3B provisional%3B PRK13635%3B~energy-coupling factor transporter ATP-binding protein EcfA 1 [Lactobacillus plantarum ZJ316]%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0666 SN35N_0667 SN35N_0667 apbE1 apbE1 703513 704625 - thiamin biosynthesis lipoprotein ApbE ApbE family%3B pfam02424%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-associated lipoprotein involved in thiamine biosynthesis [coenzyme metabolism]%3B COG1477%3B~organism:Lactobacillus plantarum ZJ316%3B~thiamin biosynthesis lipoprotein ApbE [Lactobacillus plantarum ZJ316] gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0667 SN35N_0668 SN35N_0668 SN35N_0668 704965 705891 - lipoprotein%2C FMN-binding protein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein%2C FMN-binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~this conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins%3B smart00900 gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0668 SN35N_0669 SN35N_0669 ndh2 ndh2 706174 708084 + NADH dehydrogenase NADH dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8]%3B~NADH dehydrogenase%2C FAD-containing subunit [energy production and conversion]%3B COG1252%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0669 SN35N_0670 SN35N_0670 SN35N_0670 708179 708670 + secreted protein Listerrria innocua Lin0431 is similar to the N-utilization substance G (NusG) N terminal (NGN) insert (DII)%3B cd09911%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~secreted protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~trimer interface [polypeptide binding] gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0670 SN35N_0671 SN35N_0671 SN35N_0671 708674 709243 + heptaprenyl diphosphate synthase component I heptaprenyl diphosphate synthase component I [Enterococcus casseliflavus EC20]%3B~heptaprenyl diphosphate synthase component I%3B cl01973%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0671 SN35N_0672 SN35N_0672 hepB1 hepB1 709249 710241 + heptaprenyl diphosphate synthase component II active site lid residues [active]%3B~aspartate-rich region 1%3B~aspartate-rich region 2%3B~catalytic residues [active]%3B~chain length determination region%3B~geranylgeranyl pyrophosphate synthase [coenzyme metabolism]%3B COG0142%3B~heptaprenyl diphosphate synthase component II [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding]%3B~substrate-Mg2+ binding site%3B~trans-isoprenyl diphosphate synthases%2C head-to-tail%3B cd00685 gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0672 SN35N_0673 SN35N_0673 rplQ rplQ 710645 711028 - 50S ribosomal protein L17 50S ribosomal protein L17 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L17%3B validated%3B PRK05591%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0673 SN35N_0674 SN35N_0674 rpoA rpoA 711050 711994 - DNA-directed RNA polymerase subunit alpha DNA-directed RNA polymerase subunit alpha [Lactobacillus rhamnosus GG]%3B~DNA-directed RNA polymerase subunit alpha%3B provisional%3B~N-terminal domain of the alpha subunit of bacterial RNA polymerase%3B cd06928%3B~alphaNTD - beta interaction site [polypeptide binding]%3B~alphaNTD - beta' interaction site [polypeptide binding]%3B~alphaNTD homodimer interface [polypeptide binding]%3B~bacterial RNA polymerase%2C alpha chain C terminal domain%3B pfam03118%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0674 SN35N_0675 SN35N_0675 rpsK rpsK 712081 712470 - 30S ribosomal protein S11 30S ribosomal protein S11 [Lactobacillus plantarum ZJ316]%3B~30S ribosomal protein S11%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0675 SN35N_0676 SN35N_0676 rpsM rpsM 712495 712860 - 30S ribosomal protein S13 30S ribosomal protein S13 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S13%3B TIGR03631%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~ribosomal protein S13 [translation%2C ribosomal structure and biogenesis]%3B COG0099 gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0676 SN35N_0677 SN35N_0677 rpmJ rpmJ 712888 713007 - 50S ribosomal protein L36 50S ribosomal protein L36 [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~ribosomal protein L36%3B pfam00444 gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0677 SN35N_0678 SN35N_0678 infA infA 713044 713262 - translation initiation factor IF-1 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~predicted 30S ribosome binding site%3B~rRNA binding site [nucleotide binding]%3B~stimulates the activities of the other two initiation factors%2C IF-2 and IF-3%3B~translation initiation factor IF-1 [Lactobacillus rhamnosus GG] gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0678 SN35N_0679 SN35N_0679 SN35N_0679 713437 714096 - adenylate kinase AMP-binding site [chemical binding]%3B~ATP-AMP (Ap5A)-binding site [chemical binding]%3B~adenylate kinase [Enterococcus casseliflavus EC20]%3B~adenylate kinase%3B reviewed%3B PRK00279%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0679 SN35N_0680 SN35N_0680 secY secY 714151 715446 - preprotein translocase subunit SecY SecY translocase%3B pfam00344%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~preprotein translocase subunit SecY [Lactobacillus rhamnosus GG]%3B~preprotein translocase subunit SecY%3B reviewed%3B PRK09204 gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0680 SN35N_0681 SN35N_0681 rplO rplO 715448 715879 - 50S ribosomal protein L15 50S ribosomal protein L15 [Lactobacillus plantarum ZJ316]%3B~50S ribosomal protein L15%3B reviewed%3B PRK05592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0681 SN35N_0682 SN35N_0682 rpmD rpmD 715911 716093 - 50S ribosomal protein L30 23S rRNA binding site [nucleotide binding]%3B~50S ribosomal protein L30 [Lactobacillus rhamnosus GG]%3B~L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0682 SN35N_0683 SN35N_0683 rpsE rpsE 716108 716608 - 30S ribosomal protein S5 30S ribosomal protein S5 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S5%3B validated%3B PRK00550%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~ribosomal protein S5%2C C-terminal domain%3B pfam03719%3B~ribosomal protein S5%2C N-terminal domain%3B pfam00333 gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0683 SN35N_0684 SN35N_0684 rplR rplR 716629 716985 - 50S ribosomal protein L18 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L18 [Streptococcus pneumoniae G54]%3B~5S rRNA interface [nucleotide binding]%3B~L27 interface [polypeptide binding]%3B~L5 interface [polypeptide binding]%3B~binds 5S rRNA along with protein L5 and L25%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae G54%3B~resistant to macrolides and tetracylcine gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0684 SN35N_0685 SN35N_0685 SN35N_0685 717029 717565 - 50S ribosomal protein L6 50S ribosomal protein L6 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~50S ribosomal protein L6%3B validated%3B PRK05498%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribosomal protein L6%3B pfam00347 gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0685 SN35N_0686 SN35N_0686 rpsH rpsH 717595 717990 - 30S ribosomal protein S8 30S ribosomal protein S8 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S8%3B validated%3B PRK00136%3B~binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0686 SN35N_0687 SN35N_0687 rpsN rpsN 718024 718209 - 30S ribosomal protein S14 type Z 30S ribosomal protein S14 type Z [Lactobacillus plantarum subsp. plantarum P-8]%3B~30S ribosomal protein S14%3B reviewed%3B PRK08061%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0687 SN35N_0688 SN35N_0688 rplE rplE 718230 718772 - 50S ribosomal protein L5 50S ribosomal protein L5 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L5%3B validated%3B PRK00010%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13%3B~ribosomal L5P family C-terminus%3B pfam00673%3B~ribosomal protein L5%3B pfam00281 gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0688 SN35N_0689 SN35N_0689 rplX rplX 718801 719112 - 50S ribosomal protein L24 50S ribosomal protein L24 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L24%3B reviewed%3B PRK00004%3B~KOW motif of ribosomal protein L26%3B cd06089%3B~RNA binding site [nucleotide binding]%3B~assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0689 SN35N_0690 SN35N_0690 rplN rplN 719146 719514 - 50S ribosomal protein L14 50S ribosomal protein L14 [Lactobacillus plantarum ZJ316]%3B~50S ribosomal protein L14%3B validated%3B PRK05483%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0690 SN35N_0691 SN35N_0691 rpsQ rpsQ 719557 719826 - 30S ribosomal protein S17 30S ribosomal protein S17 [Bacillus licheniformis DSM 13 %3D ATCC 14580]%3B~30S ribosomal protein S17%3B reviewed%3B PRK05610%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Bacillus licheniformis DSM 13 %3D ATCC 14580 gene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0691 SN35N_0692 SN35N_0692 rpmC rpmC 719849 720043 - 50S ribosomal protein L29 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L29 [Lactobacillus rhamnosus GG]%3B~L23 interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~one of the stabilizing components for the large ribosomal subunit%3B~organism:Lactobacillus rhamnosus GG%3B~putative translocon interaction site%3B~signal recognition particle (SRP54) interaction site%3B~trigger factor interaction site gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0692 SN35N_0693 SN35N_0693 rplP rplP 720033 720467 - 50S ribosomal protein L16 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L16 [Lactobacillus rhamnosus GG]%3B~5S rRNA interface [nucleotide binding]%3B~L25 interface [polypeptide binding]%3B~L27 interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e%3B~organism:Lactobacillus rhamnosus GG%3B~putative antibiotic binding site [chemical binding] gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0693 SN35N_0694 SN35N_0694 SN35N_0694 720470 721123 - 30S ribosomal protein S3 30S ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~30S ribosomal protein S3%3B reviewed%3B PRK00310%3B~G-X-X-G motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribosomal protein S3%2C C-terminal domain%3B pfam00189 gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0694 SN35N_0695 SN35N_0695 rplV rplV 721136 721483 - 50S ribosomal protein L22 50S ribosomal protein L22 [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~protein-rRNA interface [nucleotide binding]%3B~putative translocon binding site gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0695 SN35N_0696 SN35N_0696 rpsS rpsS 721504 721779 - 30S ribosomal protein S19 30S ribosomal protein S19 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S19%3B reviewed%3B PRK00357%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0696 SN35N_0697 SN35N_0697 SN35N_0697 721822 722661 - 50S ribosomal protein L2 50S ribosomal protein L2 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~50S ribosomal protein L2%3B validated%3B PRK09374%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribosomal proteins L2%2C C-terminal domain%3B pfam03947%3B~ribosomal proteins L2%2C RNA binding domain%3B pfam00181 gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0697 SN35N_0698 SN35N_0698 SN35N_0698 722685 722978 - 50S ribosomal protein L23 50S ribosomal protein L23 [Listeria monocytogenes]%3B~50S ribosomal protein L23%3B reviewed%3B PRK05738%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0698 SN35N_0699 SN35N_0699 rplD rplD 722978 723601 - 50S ribosomal protein L4 50S ribosomal protein L4 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L4%3B provisional%3B PRK05319%3B~L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0699 SN35N_0700 SN35N_0700 rplC rplC 723620 724249 - 50S ribosomal protein L3 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L3%3B validated%3B PRK00001%3B~binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0700 SN35N_0701 SN35N_0701 SN35N_0701 724287 724595 - 30S ribosomal protein S10 30S ribosomal protein S10 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribosomal protein S10p/S20e%3B cl00314 gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0701 SN35N_0702 SN35N_0702 SN35N_0702 725246 725410 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2025 gene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0702 SN35N_0703 SN35N_0703 SN35N_0703 725546 727642 - elongation factor G GTP/Mg2+ binding site [chemical binding]%3B~elongation factor G (EF-G) family involved in both the elongation and ribosome recycling phases of protein synthesis%3B cd01886%3B~elongation factor G [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~elongation factor G%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative GEF interaction site [polypeptide binding] gene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0703 SN35N_0704 SN35N_0704 rpsG rpsG 727784 728254 - 30S ribosomal protein S7 30S ribosomal protein S7 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S7%3B validated%3B~binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0704 SN35N_0705 SN35N_0705 rpsL rpsL 728271 728684 - 30S ribosomal protein S12 16S rRNA interaction site [nucleotide binding]%3B~23S rRNA interaction site [nucleotide binding]%3B~30S ribosomal protein S12 [Lactobacillus rhamnosus GG]%3B~S17 interaction site [polypeptide binding]%3B~S8 interaction site%3B~aminoacyl-tRNA interaction site (A-site) [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~streptomycin interaction site [chemical binding] gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0705 SN35N_0706 SN35N_0706 SN35N_0706 729220 729627 + type 4 prepilin-like proteins leader peptide processing enzyme identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~type 4 prepilin-like proteins leader peptide proces sing enzyme [Lactobacillus plantarum WCFS1] gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0706 SN35N_0707 SN35N_0707 rpoC rpoC 730279 733920 - DNA-directed RNA polymerase subunit beta' DNA binding site [nucleotide binding]%3B~DNA-directed RNA polymerase subunit beta' [Lactobacillus rhamnosus GG]%3B~DNA-directed RNA polymerase subunit beta'%3B provisional%3B~RNA polymerase I subunit A N-terminus%3B smart00663%3B~RNA polymerase Rpb1%2C domain 1%3B pfam04997%3B~RNA polymerase Rpb1%2C domain 3%3B pfam04983%3B~RNA polymerase Rpb1%2C domain 4%3B pfam05000%3B~Rpb1 (beta') - Rpb2 (beta) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~largest subunit (beta') of bacterial DNA-dependent RNA polymerase (RNAP)%2C C-terminal domain%3B cd02655%3B~largest subunit of RNA polymerase (RNAP)%2C C-terminal domain%3B cl11429%3B~organism:Lactobacillus rhamnosus GG gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0707 SN35N_0708 SN35N_0708 SN35N_0708 733938 737543 - DNA-directed RNA polymerase subunit beta DNA-directed RNA polymerase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~DNA-directed RNA polymerase subunit beta%3B reviewed%3B PRK00405%3B~RNA polymerase Rpb2%2C domain 2%3B pfam04561%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0708 SN35N_0709 SN35N_0709 SN35N_0709 737799 738401 - transcription regulator%2C TetR family bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0709 SN35N_0710 SN35N_0710 clpC clpC 738580 741084 - ATP-dependent Clp protease%2C ATP-binding subunit ClpC ATP binding site [chemical binding]%3B~ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0542%3B~ATP-dependent Clp protease%2C ATP-binding subunit Clp C [Lactobacillus plantarum ZJ316]%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B pfam10431%3B~Clp amino terminal domain%3B pfam02861%3B~UvrB/uvrC motif%3B pfam02151%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A motif%3B~walker B motif gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0710 SN35N_0711 SN35N_0711 ctsR ctsR 741103 741570 - transcription regulator Firmicute transcriptional repressor of class III stress genes (CtsR)%3B pfam05848%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0711 SN35N_0712 SN35N_0712 SN35N_0712 743113 744390 - seryl-tRNA synthetase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~seryl-tRNA synthetase N-terminal domain%3B pfam02403%3B~seryl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~seryl-tRNA synthetase%3B provisional%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0712 SN35N_0713 SN35N_0713 SN35N_0713 744673 745308 - deoxynucleoside kinase deoxynucleoside kinase [Enterococcus casseliflavus EC20]%3B~deoxynucleoside kinases [nucleotide transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~substrate specificity [chemical binding]%3B~substrate-binding site [chemical binding] gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0713 SN35N_0714 SN35N_0714 dacB dacB 745691 746464 - serine-type D-Ala-D-Ala carboxypeptidase D-alanyl-D-alanine carboxypeptidase%3B pfam02557%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum subsp. plantarum P-8] gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0714 SN35N_0715 SN35N_0715 SN35N_0715 746810 748261 - gamma-aminobutyrate permease derived by automated computational analysis using gene prediction method: protein homology.%3B~gamma-aminobutyrate permease [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine transporter%3B provisional%3B~organism:Listeria monocytogenes gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0715 SN35N_0716 SN35N_0716 SN35N_0716 748645 750327 - acetolactate synthase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~acetolactate synthase [Lactobacillus rhamnosus GG]%3B~acetolactate synthase%3B reviewed%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~pyrimidine (PYR) binding domain of POX and related proteins%3B cd07035%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~thiamine pyrophosphate enzyme%2C central domain%3B pfam00205 gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0716 SN35N_0717 SN35N_0717 SN35N_0717 750513 751037 - transcription regulator%2C Rrf2 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulator [transcription]%3B~transcription regulator%2C Rrf2 family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator%3B pfam02082 gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0717 SN35N_0718 SN35N_0718 SN35N_0718 751049 751594 - acetyltransferase acetyltransferase (GNAT) domain%3B pfam13302%3B~acetyltransferase (GNAT) family%3B pfam00583%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0718 SN35N_0719 SN35N_0719 SN35N_0719 751657 752451 + lipase/esterase esterase/lipase [lipid metabolism]%3B COG0657%3B~identified by MetaGeneAnnotator%3B putative%3B~lipase/esterase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0719 SN35N_0720 SN35N_0720 SN35N_0720 752636 753298 - phosphatase%2C PAP2 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphatase%2C PAP2 family [Lactobacillus plantarum ZJ316] gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0720 SN35N_0721 SN35N_0721 SN35N_0721 753560 754597 + transcription regulator cell envelope-related transcriptional attenuator domain%3B cl00581%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0721 SN35N_0722 SN35N_0722 SN35N_0722 754881 755339 - hypothetical membrane protein hypothetical membrane protein%2C DUF3815 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF3815)%3B pfam12821 gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0722 SN35N_0723 SN35N_0723 SN35N_0723 755376 756119 - hypothetical membrane protein hypothetical membrane protein%2C DUF1212 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1212)%3B pfam06738%3B~uncharacterized conserved protein [function unknown] gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0723 SN35N_0724 SN35N_0724 SN35N_0724 756294 756494 - cold-shock protein DNA-binding site [nucleotide binding]%3B~RNA-binding motif%3B~cold-shock protein [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0724 SN35N_0725 SN35N_0725 SN35N_0725 756746 757393 - metal-dependent regulator helix-turn-helix diphteria tox regulatory element%3B smart00529%3B~identified by MetaGeneAnnotator%3B putative%3B~iron dependent repressor%2C N-terminal DNA binding domain%3B pfam01325%3B~iron dependent repressor%2C metal binding and dimerisation domain%3B pfam02742%3B~metal-dependent regulator [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~this entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria%3B smart00899 gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0725 SN35N_0726 SN35N_0726 SN35N_0726 757605 757949 + hypothetical protein hypothetical protein zj316_1044 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0726 SN35N_0727 SN35N_0727 SN35N_0727 758453 758917 - transcription regulator%2C MerR family DNA binding residues [nucleotide binding]%3B~MerR HTH family regulatory protein%3B pfam13411%3B~helix-turn-helix DNA binding domain of GlnR-like transcription regulators%3B cd01105%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator%2C MerR family [Lactobacillus plantarum ZJ316] gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0727 SN35N_0728 SN35N_0728 SN35N_0728 759047 760525 + multidrug transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~multidrug transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0728 SN35N_0729 SN35N_0729 SN35N_0729 760525 761247 + hypothetical protein hypothetical protein zj316_1041 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0729 SN35N_0730 SN35N_0730 SN35N_0730 762017 763111 - extracellular lipoprotein precursor extracellular lipoprotein precursor%2C Asp-rich [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0730 SN35N_0731 SN35N_0731 SN35N_0731 764144 764362 - hypothetical protein DNA binding residues [nucleotide binding]%3B~MerR HTH family regulatory protein%3B pfam13411%3B~helix-turn-helix DNA binding domain of transcription regulators from the MerR superfamily%3B cl02600%3B~hypothetical protein zj316_1037 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0731 SN35N_0732 SN35N_0732 SN35N_0732 764531 765199 - probable transposase for insertion-like sequence element IS1161 identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus brevis KB290%3B~probable transposase for insertion-like sequence el ement IS1161 [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0732 SN35N_0733 SN35N_0733 SN35N_0733 765693 766394 + amino acid transport protein amino acid transport protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted branched-chain amino acid permease (azaleucine resistance) [amino acid transport and metabolism]%3B COG1296 gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0733 SN35N_0734 SN35N_0734 brnE brnE 766391 766717 + branched-chain amino acid transport protein branched-chain amino acid transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown] gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0734 SN35N_0735 SN35N_0735 asnB1 asnB1 767188 769089 + asparagine synthase asparagine synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~asparagine synthase [amino acid transport and metabolism]%3B COG0367%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~molecular Tunnel%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0735 SN35N_0736 SN35N_0736 thrA1 thrA1 769094 770296 + aspartate kinase ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme%3B cl09141%3B~aspartate kinase I%3B reviewed%3B~aspartate kinase [Lactobacillus plantarum JDM1]%3B~catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B diaminopimelate sensitive%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative aspartate binding site [chemical binding]%3B~putative catalytic residues [active]%3B~putative nucleotide binding site [chemical binding] gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0736 SN35N_0737 SN35N_0737 murE1 murE1 770491 771972 + UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase Mur ligase family%2C catalytic domain%3B pfam01225%3B~Mur ligase family%2C glutamate ligase domain%3B pfam02875%3B~Mur ligase middle domain%3B pfam08245%3B~UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase%3B provisional%3B PRK00139%3B~UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0737 SN35N_0738 SN35N_0738 xylP2 xylP2 772316 773716 + carbohydrate (isoprimoverose-like)/proton symporter%2C GPH family MFS/sugar transport protein%3B pfam13347%3B~carbohydrate (isoprimoverose-like)/proton symporter%2C GPH family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~melibiose:sodium symporter%3B provisional%3B cl15392%3B~organism:Lactobacillus plantarum WCFS1 gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0738 SN35N_0739 SN35N_0739 SN35N_0739 773700 774716 + esterase alpha/beta hydrolase fold%3B pfam07859%3B~esterase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF2424)%3B pfam10340 gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0739 SN35N_0740 SN35N_0740 SN35N_0740 774890 775189 + bacteriocin immunity protein bacteriocin immunity protein [Lactobacillus plantarum WCFS1]%3B~enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0740 SN35N_0741 SN35N_0741 SN35N_0741 775398 776066 - phosphoglycerate mutase family protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphoglycerate mutase family protein [Lactobacillus plantarum WCFS1] gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0741 SN35N_0742 SN35N_0742 SN35N_0742 776198 776764 - acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~histone acetyltransferase HPA2 and related acetyltransferases [transcription / general function prediction only]%3B COG0454%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0742 SN35N_0743 SN35N_0743 SN35N_0743 776818 777582 - integral membrane protein YibE/F-like protein%3B cl02259%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0743 SN35N_0744 SN35N_0744 SN35N_0744 777579 778718 - integral membrane protein YibE/F-like protein%3B pfam07907%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0744 SN35N_0745 SN35N_0745 SN35N_0745 778793 779794 - hypothetical protein hypothetical protein zj316_1015 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0745 SN35N_0746 SN35N_0746 SN35N_0746 780214 780978 - integral membrane protein NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum ZJ316]%3B~multimeric flavodoxin WrbA [general function prediction only]%3B COG0655%3B~organism:Lactobacillus plantarum ZJ316 gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0746 SN35N_0747 SN35N_0747 SN35N_0747 781332 781658 + transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0747 SN35N_0748 SN35N_0748 rluE rluE 781850 782731 - pseudouridylate synthase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pseudouridine synthase%2C RluA family%3B TIGR00005%3B~pseudouridine synthase%2C RsuA/RluD family%3B cd02869%3B~pseudouridylate synthase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0748 SN35N_0749 SN35N_0749 SN35N_0749 782774 784582 - ATP-dependent DNA helicase RecQ ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent DNA helicase RecQ [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~ATP-dependent DNA helicase RecQ%3B TIGR01389%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~HRDC domain%3B cl02578%3B~RQC domain%3B cl09632%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative Mg++ binding site [ion binding] gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0749 SN35N_0750 SN35N_0750 SN35N_0750 784840 785037 - transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase [Lactobacillus plantarum ZJ316] gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0750 SN35N_0751 SN35N_0751 SN35N_0751 785257 785523 + hypothetical protein hypothetical protein zj316_1009 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0751 SN35N_0752 SN35N_0752 SN35N_0752 785574 786806 + hypothetical protein hypothetical protein zj316_1008 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0752 SN35N_0753 SN35N_0753 pepD3 pepD3 786842 788248 + dipeptidase dipeptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peptidase family C69%3B pfam03577 gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0753 SN35N_0754 SN35N_0754 SN35N_0754 788701 789708 + asparagine synthetase AsnA asparagine synthetase A%3B reviewed%3B~asparagine synthetase AsnA [Lactobacillus gasseri A TCC 33323]%3B~catalyzes the formation of asparagine from aspartate and ammonia%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0754 SN35N_0755 SN35N_0755 asnC asnC 789747 791042 + asparaginyl-tRNA synthetase asparaginyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~asparaginyl-tRNA synthetase%3B validated%3B PRK03932%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif 1%3B~motif 2%3B~motif 3%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative anticodon binding site%3B~putative dimer interface [polypeptide binding] gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0755 SN35N_0756 SN35N_0756 SN35N_0756 791212 791841 + ACP phosphodieterase ACP phosphodieterase [Lactobacillus plantarum JDM1]%3B~acyl carrier protein phosphodiesterase [lipid metabolism]%3B COG1182%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0756 SN35N_0757 SN35N_0757 SN35N_0757 791950 792423 + transcription regulator MarR family%3B cl17246%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0757 SN35N_0758 SN35N_0758 SN35N_0758 792699 794564 - fumarate reductase%2C flavoprotein subunit precursor FAD binding domain%3B pfam00890%3B~FMN-binding domain%3B cl01081%3B~fumarate reductase%2C flavoprotein subunit precursor [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted oxidoreductase [general function prediction only] gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0758 SN35N_0759 SN35N_0759 SN35N_0759 794775 795701 + transcription regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0759 SN35N_0760 SN35N_0760 SN35N_0760 795772 796323 - cro/CI family transcriptional regulator cro/CI family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~enterocin A immunity%3B pfam08951%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0760 SN35N_0761 SN35N_0761 SN35N_0761 796423 797175 - cro/CI family transcriptional regulator cro/CI family transcriptional regulator [Lactobacillus plantarum 16]%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum 16%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0761 SN35N_0762 SN35N_0762 SN35N_0762 797244 797738 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum NC8 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0762 SN35N_0763 SN35N_0763 SN35N_0763 797826 797945 - hypothetical protein hypothetical protein zj316_0993 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0763 SN35N_0764 SN35N_0764 SN35N_0764 798868 801912 + mucus-binding protein%2C LPXTG-motif cell wall anchor cell-wall surface anchor repeat%3B pfam13461%3B~identified by MetaGeneAnnotator%3B putative%3B~leucine rich repeats (2 copies)%3B pfam12799%3B~mucus-binding protein%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0764 SN35N_0765 SN35N_0765 SN35N_0765 802027 802557 + histidine phosphatase superfamily protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~histidine phosphatase superfamily protein [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0765 SN35N_0766 SN35N_0766 SN35N_0766 802871 803236 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Actinobacillus minor NM305 gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0766 SN35N_0767 SN35N_0767 SN35N_0767 803496 803837 + type I restriction modification DNA specificity domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecalis ATCC 29200 gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0767 SN35N_0768 SN35N_0768 SN35N_0768 804146 804814 + probable transposase for insertion-like sequence element IS1161 identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus brevis KB290%3B~probable transposase for insertion-like sequence el ement IS1161 [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0768 SN35N_0769 SN35N_0769 hsdS1 hsdS1 804817 805041 + type I restriction modification system S subunit HsdS1 identified by MetaGeneAnnotator%3B putative%3B~organism:Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0769 SN35N_0770 SN35N_0770 SN35N_0770 805052 805969 - integrase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0770 SN35N_0771 SN35N_0771 SN35N_0771 806121 806630 - hypothetical protein hypothetical protein zj316_0986 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~restriction endonuclease S subunits [defense mechanisms]%3B COG0732 gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0771 SN35N_0772 SN35N_0772 SN35N_0772 806789 807718 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0772 SN35N_0773 SN35N_0773 SN35N_0773 807813 808358 - type I restriction enzyme%2C S subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes 08-5923%3B~restriction endonuclease S subunits [defense mechanisms]%3B COG0732%3B~type I restriction enzyme%2C S subunit [Listeria monocytogenes 08-5923]%3B~type I restriction modification DNA specificity domain%3B pfam01420 gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0773 SN35N_0774 SN35N_0774 hsdM hsdM 808355 809941 - type I restriction-modification system%2C methylation subunit HsdM N-terminal domain%3B pfam12161%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase domain%3B pfam13659%3B~organism:Lactobacillus plantarum WCFS1%3B~type I restriction system adenine methylase (hsdM)%3B TIGR00497%3B~type I restriction-modification system%2Cmethylation subunit [Lactobacillus plantarum WCFS1] gene gene773 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0774 SN35N_0775 SN35N_0775 SN35N_0775 809955 812825 - type I restriction-modification system%2C restriction subunit ATP binding site [chemical binding]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative Mg++ binding site [ion binding]%3B~type I restriction enzyme R protein N terminus (HSDR_N)%3B pfam04313%3B~type I restriction-modification system%2Crestriction subunit [Lactobacillus plantarum 16]%3B~type I site-specific restriction-modification system%2C R (restriction) subunit and related helicases [defense mechanisms] gene gene774 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0775 SN35N_0776 SN35N_0776 SN35N_0776 813056 815590 - aminopeptidase N Zn binding site [ion binding]%3B~aminopeptidase N [Lactobacillus rhamnosus GG]%3B~domain of unknown function (DUF3358)%3B pfam11838%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~peptidase M1 aminopeptidase N family incudes tricorn interacting factor F3%2C endoplasmic reticulum aminopeptidase 1 (ERAP1)%2C aminopeptidase Q (APQ)%3B cd09601%3B~peptidase family M1%3B pfam01433%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0776 SN35N_0777 SN35N_0777 SN35N_0777 815772 816344 - hypothetical protein hypothetical protein zj316_0981 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0777 SN35N_0778 SN35N_0778 SN35N_0778 816451 816783 - PTS system%2C EIIA component PTS system%2C EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~methionine cluster%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0778 SN35N_0779 SN35N_0779 SN35N_0779 817145 818065 - lipoprotein precursor identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0779 SN35N_0780 SN35N_0780 hpaG hpaG 818205 819005 - 2-hydroxyhepta-2%2C4-diene-1%2C7-dioateisomerase / 5-carboxymethyl-2-oxo-hex-3-ene-1%2C7-dioatedecarboxylase 2-hydroxyhepta-2%2C4-diene-1%2C7-dioateisomerase / 5-ca rboxymethyl-2-oxo-hex-3-ene-1%2C7-dioatedecarboxylase [Lactobacillus plantarum ZJ316]%3B~2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1%2C7-dioic acid hydratase (catechol pathway) [secondary metabolites biosynthesis%2C transport%2C and catabolism]%3B COG0179%3B~fumarylacetoacetate (FAA) hydrolase family%3B pfam01557%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0780 SN35N_0781 SN35N_0781 asp2 asp2 819209 819649 - alkaline shock protein Asp23 family%3B pfam03780%3B~alkaline shock protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0781 SN35N_0782 SN35N_0782 asp3 asp3 819710 820132 - alkaline shock protein 23 Asp23 family%3B pfam03780%3B~alkaline shock protein 23 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0782 SN35N_0783 SN35N_0783 SN35N_0783 820147 820329 - hypothetical protein hypothetical protein zj316_0974 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0783 SN35N_0784 SN35N_0784 SN35N_0784 820342 820887 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0784 SN35N_0785 SN35N_0785 SN35N_0785 820899 821153 - transglycosylase-associated protein identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecium Com12%3B~transglycosylase associated protein%3B cl00978%3B~transglycosylase-associated protein [Enterococcus faecium Com12] gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0785 SN35N_0786 SN35N_0786 SN35N_0786 821394 823241 - acyltransferase acyltransferase [Lactobacillus plantarum JDM1]%3B~catalytic triad [active]%3B~glucans biosynthesis protein%3B provisional%3B PRK03854%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxyanion hole [active]%3B~predicted acyltransferases [lipid metabolism] gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0786 SN35N_0787 SN35N_0787 SN35N_0787 823231 823614 - extracellular protein%2C MORN repeat family extracellular protein%2C MORN repeat family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0787 SN35N_0788 SN35N_0788 SN35N_0788 824098 826602 - cell surface protein cell surface protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0788 SN35N_0789 SN35N_0789 SN35N_0789 826982 827674 - CAAX family protease CAAX family protease [Lactobacillus plantarum JDM1]%3B~CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0789 SN35N_0790 SN35N_0790 SN35N_0790 827976 830939 - superfamily I DNA/RNA helicase AAA domain%3B pfam13087%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~superfamily I DNA and RNA helicases and helicase subunits [DNA replication%2C recombination%2C and repair]%3B~superfamily I DNA/RNA helicase [Lactobacillus plantarum WCFS1] gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0790 SN35N_0791 SN35N_0791 SN35N_0791 831476 831844 + transcription regulator helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum JDM1%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0791 SN35N_0792 SN35N_0792 SN35N_0792 832078 832446 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0792 SN35N_0793 SN35N_0793 guaA guaA 832772 834328 - GMP synthase AMP/PPi binding site [chemical binding]%3B~ATP binding subdomain [chemical binding]%3B~GMP synthase [Enterococcus faecium DO]%3B~GMP synthase%3B reviewed%3B PRK00074%3B~candidate oxyanion hole%3B~catalytic triad [active]%3B~dimerization subdomain%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecium DO%3B~potential glutamine specificity residues [chemical binding]%3B~type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase%3B cd01742 gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0793 SN35N_0794 SN35N_0794 coaA coaA 834422 835351 - pantothenate kinase ATP-binding site [chemical binding]%3B~CoA-binding site [chemical binding]%3B~Mg2+-binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pantothenate kinase [Lactobacillus plantarum ZJ316]%3B~pantothenate kinase%3B provisional gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0794 SN35N_0795 SN35N_0795 SN35N_0795 835520 836449 - enoyl-ACP reductase FMN binding site [chemical binding]%3B~enoyl-ACP reductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative catalytic residue [active]%3B~putative enoyl-[acyl-carrier-protein] reductase II%3B TIGR03151%3B~substrate binding site [chemical binding] gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0795 SN35N_0796 SN35N_0796 SN35N_0796 836744 839050 - DNA helicase DNA helicase [Lactobacillus plantarum ZJ316]%3B~family description%3B pfam13538%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~part of AAA domain%3B pfam13245%3B~superfamily I DNA and RNA helicases [general function prediction only] gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0796 SN35N_0797 SN35N_0797 SN35N_0797 839282 839929 + DedA family protein DedA family protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~SNARE associated Golgi protein%3B cl00429%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~uncharacterized membrane-associated protein [function unknown]%3B COG0586 gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0797 SN35N_0798 SN35N_0798 SN35N_0798 840063 841016 + 7%2C8-dihydro-8-oxoguanine-triphosphatase 7%2C8-dihydro-8-oxoguanine-triphosphatase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nudix motif%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative active site [active]%3B~putative metal binding site [ion binding]%3B~uncharacterized protein family (UPF0157)%3B cl00987 gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0798 SN35N_0799 SN35N_0799 napA2 napA2 841038 842894 + Na(+)/H(+) antiporter K+ transport systems%2C NAD-binding component [inorganic ion transport and metabolism]%3B COG0569%3B~Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B COG0475%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum JDM1]%3B~TrkA-C domain%3B pfam02080%3B~TrkA-N domain%3B pfam02254%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~sodium/hydrogen exchanger family%3B pfam00999 gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0799 SN35N_0800 SN35N_0800 pgm4 pgm4 842965 843621 + phosphoglycerate mutase family protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoglycerate mutase family protein [Lactobacillus plantarum ZJ316] gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0800 SN35N_0801 SN35N_0801 pgm3 pgm3 843636 844313 + phosphoglycerate mutase catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoglycerate mutase [Lactobacillus plantarum subsp. plantarum P-8] gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0801 SN35N_0802 SN35N_0802 SN35N_0802 844503 845678 + transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase%2C mutator family%3B pfam00872 gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0802 SN35N_0803 SN35N_0803 SN35N_0803 845990 846190 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0803 SN35N_0804 SN35N_0804 sugE sugE 846497 846811 - molecular chaperone GroEL identified by MetaGeneAnnotator%3B putative%3B~membrane transporters of cations and cationic drugs [inorganic ion transport and metabolism]%3B COG2076%3B~molecular chaperone GroEL [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0804 SN35N_0805 SN35N_0805 SN35N_0805 846953 847390 - MutT/nudix family protein MutT/nudix family protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0805 SN35N_0806 SN35N_0806 SN35N_0806 847479 848774 + GTP-binding protein HflX GTP-binding GTPase N-terminal%3B pfam13167%3B~GTP-binding protein HflX [Lactobacillus plantarum subsp. plantarum P-8]%3B~GTP-binding protein HflX%3B TIGR03156%3B~GTP/Mg2+ binding site [chemical binding]%3B~HflX GTPase family%3B cd01878%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0806 SN35N_0807 SN35N_0807 SN35N_0807 848887 849447 - transcription regulator%2C TetR family bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0807 SN35N_0808 SN35N_0808 SN35N_0808 849775 850266 + transport protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~sulfite exporter TauE/SafE%3B pfam01925%3B~transport protein [Lactobacillus plantarum JDM1] gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0808 SN35N_0809 SN35N_0809 SN35N_0809 850386 851543 - multidrug transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~multidrug transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0809 SN35N_0810 SN35N_0810 SN35N_0810 851540 851971 - MarR family transcriptional regulator MarR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~MarR family%3B pfam12802%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulators [transcription]%3B COG1846 gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0810 SN35N_0811 SN35N_0811 SN35N_0811 852116 852994 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0811 SN35N_0812 SN35N_0812 SN35N_0812 853268 853708 + transcription regulator%2C MarR family MarR family%3B pfam01047%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1846 gene gene811 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0812 SN35N_0813 SN35N_0813 SN35N_0813 853741 853941 - hypothetical protein hypothetical protein zj316_0932 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0813 SN35N_0814 SN35N_0814 SN35N_0814 853979 855310 + amino acid permease COG0531 amino acid transporters%3B~amino acid permease [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~putative fructoselysine transporter%3B provisional%3B PRK11357%3B~spore germination protein%3B cl15802 gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0814 SN35N_0815 SN35N_0815 SN35N_0815 855444 856202 - PTS-related protein Mg binding site [ion binding]%3B~PTS-related protein [Lactobacillus plantarum WCFS1]%3B~YdjC motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active]%3B~putative homodimer interface [polypeptide binding]%3B~uncharacterized YdjC-like family proteins from bacteria%3B cd10805 gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0815 SN35N_0816 SN35N_0816 pts11BC pts11BC 856209 857660 - beta-glucosides PTS%2C EIIBC PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~beta-glucosides PTS%2C EIIBC [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0816 SN35N_0817 SN35N_0817 bglG1 bglG1 857688 858530 - transcription antiterminator CAT RNA binding domain%3B smart01061%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription antiterminator [Lactobacillus plantarum JDM1]%3B~transcriptional antiterminator BglG%3B provisional gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0817 SN35N_0818 SN35N_0818 pts11A pts11A 858556 859047 - PTS system transporter subunit IIA HPr interaction site%3B~PTS system transporter subunit IIA [Lactobacillus plantarum WCFS1]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphorylation site [posttranslational modification] gene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0818 SN35N_0819 SN35N_0819 isp2 isp2 859391 859621 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0819 SN35N_0820 SN35N_0820 isp2 isp2 859584 860306 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0820 SN35N_0821 SN35N_0821 isp2 isp2 860346 861041 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1] gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0821 SN35N_0822 SN35N_0822 SN35N_0822 861072 861725 - ABC-type amino acid transport system%2C permease component ABC-ATPase subunit interface%3B~ABC-type amino acid transport system%2C permease component [Lactobacillus gasseri ATCC 33323]%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~putative PBP binding loops gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0822 SN35N_0823 SN35N_0823 SN35N_0823 861742 862383 - ABC-type amino acid transport system%2C permease component ABC-ATPase subunit interface%3B~ABC-type amino acid transport system%2C permease component [Lactobacillus gasseri ATCC 33323]%3B~ABC-type arginine transport system%2C permease component [amino acid transport and metabolism]%3B COG4215%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~putative PBP binding loops gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0823 SN35N_0824 SN35N_0824 glnH1 glnH1 862383 863219 - glutamine ABC transporter%2C substrate binding protein bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~glutamine ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0824 SN35N_0825 SN35N_0825 SN35N_0825 863240 863980 - glutamine ABC transporter ATP-binding protein ABC transporter signature motif%3B~ABC-type polar amino acid transport system%2C ATPase component [amino acid transport and metabolism]%3B COG1126%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~glutamine ABC transporter ATP-binding protein [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~walker A/P-loop%3B~walker B gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0825 SN35N_0826 SN35N_0826 SN35N_0826 864300 864455 - hypothetical protein hypothetical protein zj316_0921 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0826 SN35N_0827 SN35N_0827 SN35N_0827 864513 864764 + hypothetical protein hypothetical protein zj316_0920 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0827 SN35N_0828 SN35N_0828 SN35N_0828 864998 865990 - bifunctional protein: amino acid aminotransferase%3B 2-hydroxyacid dehydrogenase D-lactate dehydrogenase and D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH)%2C NAD-binding and catalytic domains%3B cd12186%3B~D-lactate dehydrogenase%3B validated%3B~NAD binding site [chemical binding]%3B~bifunctional protein: amino acid aminotransferase%3B 2-hydroxyacid dehydrogenase [Lactobacillus plantarum ZJ316]%3B~catalytic site [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0828 SN35N_0829 SN35N_0829 SN35N_0829 865993 867183 - aspartate transaminase aromatic amino acid aminotransferase%3B validated%3B~aspartate transaminase [Lactobacillus plantarum ZJ316]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0829 SN35N_0830 SN35N_0830 gph1 gph1 867589 868215 + phosphohydrolase identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphohydrolase [Lactobacillus plantarum ZJ316]%3B~predicted phosphatases [general function prediction only]%3B COG0546 gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0830 SN35N_0831 SN35N_0831 SN35N_0831 868158 868382 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0831 SN35N_0832 SN35N_0832 SN35N_0832 868408 869226 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0832 SN35N_0833 SN35N_0833 SN35N_0833 869230 869718 - extracellular protein%2C Ser/Thr-rich identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0833 SN35N_0834 SN35N_0834 SN35N_0834 869903 870433 + transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~winged helix-turn helix%3B pfam13551 gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0834 SN35N_0835 SN35N_0835 SN35N_0835 870430 871317 + transposase HTH-like domain%3B pfam13276%3B~OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13333%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0835 SN35N_0836 SN35N_0836 SN35N_0836 871354 871797 - metal uptake regulator dimer interface [polypeptide binding]%3B~ferric uptake regulator(Fur) and related metalloregulatory proteins%3B typically iron-dependent%2C DNA-binding repressors and activators%3B cd07153%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site 1 [ion binding]%3B~metal binding site 2 [ion binding]%3B~metal uptake regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative DNA binding helix%3B~structural Zn2+ binding site [ion binding] gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0836 SN35N_0837 SN35N_0837 gmk2 gmk2 871908 872489 - guanylate kinase G-X2-G-X-G-K%3B~catalytic site [active]%3B~guanylate kinase [Lactobacillus plantarum JDM1]%3B~guanylate kinase [nucleotide transport and metabolism]%3B COG0194%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0837 SN35N_0838 SN35N_0838 SN35N_0838 872640 872789 + hypothetical protein hypothetical protein zj316_0912 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0838 SN35N_0839 SN35N_0839 SN35N_0839 872866 873285 - phosphohydrolase Ap4A binding cleft/pocket [chemical binding]%3B~P4 phosphate binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphohydrolase [Lactobacillus plantarum WCFS1]%3B~putative P2/P3 phosphate binding site [ion binding] gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0839 SN35N_0840 SN35N_0840 pdx pdx 873339 874157 - pyridoxal kinase ATP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyridoxal kinase [Lactobacillus plantarum JDM1]%3B~substrate binding site [chemical binding] gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0840 SN35N_0841 SN35N_0841 SN35N_0841 874521 874994 - hypothetical protein AP2 domain%3B pfam00847%3B~hypothetical protein zj316_0909 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0841 SN35N_0842 SN35N_0842 SN35N_0842 875499 876896 + amino acid transporter amino acid transporter [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~amino acid transporter%3B TIGR00909%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~spore germination protein%3B cl15802 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0842 SN35N_0843 SN35N_0843 SN35N_0843 877047 877349 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase [Lactobacillus plantarum ZJ316] gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0843 SN35N_0844 SN35N_0844 SN35N_0844 877467 877871 - redox protein%2C regulator of disulfide bond formation OsmC-like protein%3B cl00767%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~redox protein%2C regulator of disulfide bond formation [Lactobacillus plantarum WCFS1] gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0844 SN35N_0845 SN35N_0845 pepX pepX 878006 880447 + Xaa-Pro dipeptidase X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain%3B pfam08530%3B~X-prolyl dipeptidyl aminopeptidase PepX%2C N-terminal%3B smart00940%3B~Xaa-Pro dipeptidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~x-prolyl-dipeptidyl aminopeptidase%3B provisional gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0845 SN35N_0846 SN35N_0846 SN35N_0846 880612 882594 - acyltransferase acyltransferase [Lactobacillus plantarum JDM1]%3B~catalytic triad [active]%3B~fucose 4-O-acetylase and related acetyltransferases [carbohydrate transport and metabolism]%3B COG3594%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxyanion hole [active]%3B~predicted acyltransferases [lipid metabolism] gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0846 SN35N_0847 SN35N_0847 birA2 birA2 883016 884005 - biotin-(acetyl-CoA-carboxylase) ligase and biotin operon repressor bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor%3B provisional%3B~biotin operon repressor [transcription]%3B COG1654%3B~biotin protein ligase C terminal domain%3B pfam02237%3B~biotin-(acetyl-CoA-carboxylase) ligase and biotin operon repressor [Lactobacillus plantarum WCFS1]%3B~biotin/lipoate A/B protein ligase family%3B pfam03099%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein disulfide oxidoreductases and other proteins with a thioredoxin fold%3B cl00388 gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0847 SN35N_0848 SN35N_0848 SN35N_0848 884439 885368 + prolyl aminopeptidase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~proline-specific peptidase%2C Bacillus coagulans-type subfamily%3B TIGR01250%3B~prolyl aminopeptidase [Lactobacillus rhamnosus GG]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0848 SN35N_0849 SN35N_0849 pox2 pox2 885490 887250 - pyruvate oxidase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyrimidine (PYR) binding domain of POX%3B cd07039%3B~pyruvate oxidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~pyruvate oxidase%3B TIGR02720%3B~tetramer interface [polypeptide binding]%3B~thiamine pyrophosphate enzyme%2C central domain%3B pfam00205 gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0849 SN35N_0850 SN35N_0850 ribC1 ribC1 887747 888430 - bifunctional protein: riboflavin kinase%3B FMN adenylyltransferase FAD synthetase%2C N-terminal domain of the bifunctional enzyme%3B cd02064%3B~bifunctional protein: riboflavin kinase%3B FMN adenylyltransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0850 SN35N_0851 SN35N_0851 SN35N_0851 888571 890310 - pyruvate oxidase or other thiamine pyrophosphate-requiring enzyme PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~pyrimidine (PYR) binding domain of POX%3B cd07039%3B~pyruvate oxidase or other thiamine pyrophosphate-requiring enzyme [Lactobacillus gasseri ATCC 33323]%3B~pyruvate oxidase%3B TIGR02720%3B~tetramer interface [polypeptide binding]%3B~thiamine pyrophosphate enzyme%2C central domain%3B cl00815 gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0851 SN35N_0852 SN35N_0852 SN35N_0852 890929 892236 - MFS transporter MFS transporter%2C AGZA family%2C xanthine/uracil permease [Pediococcus acidilactici 7_4]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4%3B~xanthine/uracil/vitamin C permease [nucleotide transport and metabolism] gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0852 SN35N_0853 SN35N_0853 SN35N_0853 892516 892677 + hypothetical protein hypothetical protein zj316_0897 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0853 SN35N_0854 SN35N_0854 SN35N_0854 892892 893365 - transcription regulator MarR family%3B pfam12802%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators [transcription]%3B COG1846 gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0854 SN35N_0855 SN35N_0855 licD licD 893534 894343 + lipooligosaccharide cholinephosphotransferase LicD family%3B pfam04991%3B~identified by MetaGeneAnnotator%3B putative%3B~lipooligosaccharide cholinephosphotransferase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0855 SN35N_0856 SN35N_0856 ppx3 ppx3 894668 896197 + exopolyphosphatase Mg2+ binding site [ion binding]%3B~Ppx/GppA phosphatase family%3B pfam02541%3B~Zn2+ binding site [ion binding]%3B~exopolyphosphatase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~organism:Lactobacillus plantarum ZJ316 gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0856 SN35N_0857 SN35N_0857 ppk ppk 896198 898354 + polyphosphate kinase catalytic C-terminal domain%2C first repeat%2C of Pseudomonas aeruginosa polyphosphate kinase 1 and similar proteins%3B cd09165%3B~catalytic C-terminal domain%2C second repeat%2C of Pseudomonas aeruginosa polyphosphate kinase 1 and similar proteins%3B cd09168%3B~catalytic site [active]%3B~catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~polyphosphate kinase N-terminal domain%3B pfam13089%3B~polyphosphate kinase [Lactobacillus rhamnosus GG]%3B~polyphosphate kinase middle domain%3B pfam02503%3B~polyphosphate kinase%3B provisional%3B~putative active site [active]%3B~putative domain interface [polypeptide binding] gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0857 SN35N_0858 SN35N_0858 ppx2 ppx2 898357 899310 + exopolyphosphatase Ppx/GppA phosphatase family%3B pfam02541%3B~exopolyphosphatase [Lactobacillus plantarum ZJ316]%3B~exopolyphosphatase%3B TIGR03706%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0858 SN35N_0859 SN35N_0859 SN35N_0859 899479 900912 + multi drug transporter%2C major facilitator superfamily%2C EmrB/QacA subfamily identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~multi drug transporter%2C major facilitator superfamily%2C EmrB/QacA subfamily [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative substrate translocation pore gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0859 SN35N_0860 SN35N_0860 SN35N_0860 901028 901540 + integral membrane protein VanZ like family%3B cl01971%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0860 SN35N_0861 SN35N_0861 SN35N_0861 901708 901938 - hypothetical protein hypothetical protein zj316_0889 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0861 SN35N_0862 SN35N_0862 spx1 spx1 902207 902629 - RNA polymerase (RNAP)-binding regulatory protein%2C arsenate reductase (ArsC) family%2C Spx subfamily ArsC family%3B pfam03960%3B~RNA polymerase (RNAP)-binding regulatory protein%2C a rsenate reductase (ArsC) family%2C Spx subfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative catalytic residues [active]%3B~thiol/disulfide switch gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0862 SN35N_0863 SN35N_0863 SN35N_0863 903022 903804 - hypothetical protein hypothetical protein zj316_0887 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2812)%3B pfam11193 gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0863 SN35N_0864 SN35N_0864 gykA gykA 904109 905635 + glycerol kinase Escherichia coli glycerol kinase-like proteins%3B belongs to the FGGY family of carbohydrate kinases%3B cd07786%3B~FBP binding site [chemical binding]%3B~MgATP binding site [chemical binding]%3B~N- and C-terminal domain interface [polypeptide binding]%3B~catalytic site [active]%3B~glycerol binding site [chemical binding]%3B~glycerol kinase [Lactobacillus plantarum WCFS1]%3B~glycerol kinase%3B provisional%3B PRK00047%3B~homodimer interface [polypeptide binding]%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein IIAGlc interface [polypeptide binding] gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0864 SN35N_0865 SN35N_0865 SN35N_0865 906673 907221 - transport protein%2C major facilitator family%2C N-terminal domain protein H+ antiporter protein%3B TIGR00900%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator family%2C N-terminal domain protein [Lactobacillus plantarum ZJ316] gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0865 SN35N_0866 SN35N_0866 SN35N_0866 907218 907868 - transport protein%2C major facilitator family%2C N-terminal domain protein H+ antiporter protein%3B TIGR00900%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator family%2C N-terminal domain protein [Lactobacillus plantarum ZJ316] gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0866 SN35N_0867 SN35N_0867 SN35N_0867 907870 908097 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0867 SN35N_0868 SN35N_0868 SN35N_0868 908162 908914 - nitroreductase family protein FMN binding site [chemical binding]%3B~NADPH bind site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitroreductase family protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0868 SN35N_0869 SN35N_0869 SN35N_0869 908915 909340 - hypothetical protein hypothetical protein zj316_0882 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0869 SN35N_0870 SN35N_0870 SN35N_0870 909587 909895 - hypothetical protein hypothetical protein zj316_0881 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0870 SN35N_0871 SN35N_0871 galM1 galM1 910602 911651 + aldose 1-epimerase aldose 1-epimerase [Lactobacillus plantarum JDM1]%3B~catalytic residues [active]%3B~galactose mutarotase_like%3B cd09019%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0871 SN35N_0872 SN35N_0872 SN35N_0872 911986 912573 + transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0872 SN35N_0873 SN35N_0873 SN35N_0873 912651 913466 - hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B cl17202%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted hydrolases of the HAD superfamily [general function prediction only]%3B COG0561 gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0873 SN35N_0874 SN35N_0874 SN35N_0874 913597 914262 - diguanylate cyclase/phosphodiesterase domain-containing protein diguanylate cyclase/phosphodiesterase domain-contai ning protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0874 SN35N_0875 SN35N_0875 glmS glmS 914462 916279 - glutamine--fructose-6-phosphate aminotransferase dimer interface [polypeptide binding]%3B~glucosamine--fructose-6-phosphate aminotransferase%3B reviewed%3B~glutaminase active site [active]%3B~glutamine--fructose-6-phosphate aminotransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0875 SN35N_0876 SN35N_0876 SN35N_0876 916817 918172 - phosphoglucosamine mutase identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phosphoglucosamine mutase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~phosphoglucosamine mutase%3B provisional%3B PRK14316%3B~substrate binding site [chemical binding] gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0876 SN35N_0877 SN35N_0877 SN35N_0877 918204 919181 - cell surface protein%2C YbbR-like family YbbR-like protein%3B pfam07949%3B~cell surface protein%2C YbbR-like family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0877 SN35N_0878 SN35N_0878 SN35N_0878 919178 920020 - membrane protein DisA bacterial checkpoint controller nucleotide-binding%3B pfam02457%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized conserved protein [function unknown] gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0878 SN35N_0879 SN35N_0879 SN35N_0879 920205 920870 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF1361)%3B pfam07099 gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0879 SN35N_0880 SN35N_0880 SN35N_0880 920946 921458 - transcription regulator%2C MarR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316]%3B~winged helix DNA-binding domain%3B pfam13463 gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0880 SN35N_0881 SN35N_0881 nhaP1 nhaP1 921597 923726 - Na(+)/H(+) antiporter Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B cl10482%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum WCFS1]%3B~NhaP-type Na+/H+ and K+/H+ antiporters [inorganic ion transport and metabolism]%3B COG0025%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0881 SN35N_0882 SN35N_0882 SN35N_0882 923760 924668 - UDP-N-acetylenolpyruvoylglucosamine reductase FAD binding domain%3B pfam01565%3B~UDP-N-acetylenolpyruvoylglucosamine reductase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~UDP-N-acetylenolpyruvoylglucosamine reductase%2C C-terminal domain%3B pfam02873%3B~UDP-N-acetylenolpyruvoylglucosamine reductase%3B provisional%3B PRK13905%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0882 SN35N_0883 SN35N_0883 SN35N_0883 924840 925742 - oxidoreductase%2C NAD-dependent identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase family%2C NAD-binding rossmann fold%3B pfam01408%3B~oxidoreductase%2C NAD-dependent [Lactobacillus plantarum ZJ316]%3B~predicted dehydrogenases and related proteins [general function prediction only]%3B COG0673 gene gene882 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0883 SN35N_0884 SN35N_0884 SN35N_0884 926064 926828 + exodeoxyribonuclease III AP binding site [nucleotide binding]%3B~DNA binding site [nucleotide binding]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~exodeoxyribonuclease III [Listeria monocytogenes]%3B~human Ape1-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases%3B cd09087%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site A [ion binding]%3B~metal binding site B [ion binding]%3B~organism:Listeria monocytogenes%3B~putative catalytic site [active]%3B~putative phosphate binding site [ion binding] gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0884 SN35N_0885 SN35N_0885 SN35N_0885 926891 927427 + DNA-directed DNA polymerase III subunit epsilon DNA-directed DNA polymerase III subunit epsilon [Lactobacillus plantarum WCFS1]%3B~an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III%3B cd06130%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~substrate binding site [chemical binding] gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0885 SN35N_0886 SN35N_0886 SN35N_0886 927651 928166 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~acetyltransferases%2C including N-acetylases of ribosomal proteins [translation%2C ribosomal structure and biogenesis]%3B COG1670%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0886 SN35N_0887 SN35N_0887 SN35N_0887 928172 928633 - ATP/GTP hydrolase ATP/GTP hydrolase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted ATPase or kinase [general function prediction only] gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0887 SN35N_0888 SN35N_0888 pta pta 928743 929720 - phosphate acetyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphate acetyltransferase [Lactobacillus plantarum ZJ316]%3B~phosphotransacetylase%3B reviewed%3B PRK09653 gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0888 SN35N_0889 SN35N_0889 SN35N_0889 929744 930436 - uracil-DNA glycosylase UGI interface [polypeptide binding]%3B~catalytic site [active]%3B~family 1 of uracil-DNA glycosylase (UDG) enzymes%3B cd10027%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0889 SN35N_0890 SN35N_0890 SN35N_0890 930552 931421 + hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B cl17202%3B~haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0890 SN35N_0891 SN35N_0891 SN35N_0891 931445 932008 + hypothetical protein Tubby C 2%3B cl02043%3B~hypothetical protein zj316_0859 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0891 SN35N_0892 SN35N_0892 glnQ1 glnQ1 932282 933016 - glutamine ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC-type polar amino acid transport system%2C ATPase component [amino acid transport and metabolism]%3B COG1126%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the histidine and glutamine transporters%3B cd03262%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~glutamine ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0892 SN35N_0893 SN35N_0893 glnH glnH 933019 934455 - glutamine ABC transporter substrate-binding protein ABC-ATPase subunit interface%3B~ABC-type arginine transport system%2C permease component [amino acid transport and metabolism]%3B COG4215%3B~bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~glutamine ABC transporter substrate-binding protein [Lactobacillus rhamnosus Lc 705]%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus rhamnosus Lc 705%3B~putative PBP binding loops%3B~substrate binding pocket [chemical binding] gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0893 SN35N_0894 SN35N_0894 SN35N_0894 934848 935279 - cell surface protein cell surface protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0894 SN35N_0895 SN35N_0895 SN35N_0895 935251 942798 - cell surface protein precursor bacterial Ig-like domain (group 3)%3B pfam07523%3B~cell surface protein precursor [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0895 SN35N_0896 SN35N_0896 SN35N_0896 943258 943728 - SsrA-binding protein SmpB-tmRNA interface%3B~SsrA-binding protein [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~small protein B (SmpB) is a component of the trans-translation system in prokaryotes for releasing stalled ribosome from damaged messenger RNAs%3B cd09294%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0896 SN35N_0897 SN35N_0897 SN35N_0897 943754 946168 - ribonuclease R RNA binding site [nucleotide binding]%3B~RNB domain%3B pfam00773%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~ribonuclease B OB domain%3B pfam08206%3B~ribonuclease R [Lactobacillus plantarum JDM1]%3B~ribonuclease R%3B TIGR02063 gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0897 SN35N_0898 SN35N_0898 SN35N_0898 946177 946923 - carboxylesterase carboxylesterase [Lactobacillus plantarum WCFS1]%3B~esterase/lipase [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0898 SN35N_0899 SN35N_0899 secG secG 946975 947211 - preprotein translocase%2C SecG subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~preprotein translocase%2C SecG subunit [Lactobacillus plantarum ZJ316]%3B~protein translocase%2C SecG subunit%3B TIGR00810 gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0899 SN35N_0900 SN35N_0900 eriC eriC 947311 948621 - chloride channel protein Cl- binding residues [ion binding]%3B~Cl- selectivity filter%3B~H+/Cl- coupling transport residue%3B~TrkA-C domain%3B pfam02080%3B~chloride channel protein EriC [inorganic ion transport and metabolism]%3B COG0038%3B~chloride channel protein [Lactobacillus rhamnosus GG]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~pore gating glutamate residue gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0900 SN35N_0901 SN35N_0901 eriC eriC 948602 948868 - chloride channel protein chloride channel protein EriC [inorganic ion transport and metabolism]%3B COG0038%3B~chloride channel protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0901 SN35N_0902 SN35N_0902 SN35N_0902 948885 949760 - hypothetical protein hypothetical protein zj316_0850 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0902 SN35N_0903 SN35N_0903 eno1 eno1 949908 951236 - enolase 1 dimer interface [polypeptide binding]%3B~enolase 1 [Lactobacillus plantarum ZJ316]%3B~enolase%3B provisional%3B PRK00077%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0903 SN35N_0904 SN35N_0904 tpiA tpiA 951318 952076 - triosephosphate isomerase catalytic triad [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate%3B~substrate binding site [chemical binding]%3B~triosephosphate isomerase [Lactobacillus helveticus DPC 4571] gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0904 SN35N_0905 SN35N_0905 SN35N_0905 952103 953305 - phosphoglycerate kinase ADP binding site [chemical binding]%3B~catalytic site [active]%3B~hinge regions%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phosphoglycerate kinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~phosphoglycerate kinase%3B pfam00162%3B~substrate binding site [chemical binding] gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0905 SN35N_0906 SN35N_0906 SN35N_0906 953426 954448 - glyceraldehyde-3-phosphate dehydrogenase glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B cl15856%3B~glyceraldehyde-3-phosphate dehydrogenase [Lactobacillus gasseri ATCC 33323]%3B~glyceraldehyde-3-phosphate dehydrogenase%2C type I%3B TIGR01534%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0906 SN35N_0907 SN35N_0907 cggR cggR 954515 955546 - central glycolytic genes regulator central glycolytic genes regulator [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative sugar-binding domain%3B pfam04198 gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0907 SN35N_0908 SN35N_0908 rpoN rpoN 955763 957100 - DNA-directed RNA polymerase sigma factor 54 DNA-directed RNA polymerase%2C sigma factor 54 [Lactobacillus plantarum ZJ316]%3B~RNA polymerase factor sigma-54%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sigma-54 factor%2C Activator interacting domain (AID)%3B pfam00309%3B~sigma-54 factor%2C core binding domain%3B pfam04963%3B~sigma-54%2C DNA binding domain%3B pfam04552 gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0908 SN35N_0909 SN35N_0909 SN35N_0909 958074 958664 + ATP-dependent Clp protease proteolytic subunit ATP-dependent Clp protease proteolytic subunit [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~Clp protease%3B pfam00574%3B~active site residues [active]%3B~caseinolytic protease (ClpP) is an ATP-dependent%2C highly conserved serine protease%3B cd07017%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomer interface [polypeptide binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0909 SN35N_0910 SN35N_0910 serA2 serA2 958823 959797 + phosphoglycerate dehydrogenase catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactate dehydrogenase and related dehydrogenases [energy production and conversion / coenzyme metabolism / general function prediction only]%3B COG1052%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoglycerate dehydrogenase [Lactobacillus plantarum JDM1]%3B~putative D-isomer specific 2-hydroxyacid dehydrogenases%2C NAD-binding and catalytic domains%3B cd12178%3B~putative NAD binding site [chemical binding]%3B~putative ligand binding site [chemical binding] gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0910 SN35N_0911 SN35N_0911 SN35N_0911 960009 961661 - lipoprotein precursor%2C peptide binding protein OppA-like protein ABC-type oligopeptide transport system%2C periplasmic component [amino acid transport and metabolism]%3B COG4166%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor%2C peptide binding protein OppA-like protein [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0911 SN35N_0912 SN35N_0912 whiA whiA 962086 963018 - putative sporulation transcription regulator WhiA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative sporulation transcription regulator WhiA [Lactobacillus plantarum ZJ316]%3B~sporulation regulator WhiA N terminal%3B pfam10298%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0912 SN35N_0913 SN35N_0913 SN35N_0913 963031 963969 - hypothetical protein conserved hypothetical protein%2C cofD-related%3B TIGR01826%3B~dimer interface [polypeptide binding]%3B~family of mostly uncharacterized proteins similar to B.subtilis YvcK%3B cd07187%3B~hypothetical protein zj316_0839 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphate binding site [ion binding]%3B~putative substrate binding pocket [chemical binding] gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0913 SN35N_0914 SN35N_0914 SN35N_0914 964029 964913 - UPF0042 nucleotide-binding protein UPF0042 nucleotide-binding protein [Lactobacillus plantarum ZJ316]%3B~glmZ(sRNA)-inactivating NTPase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0914 SN35N_0915 SN35N_0915 SN35N_0915 965110 965646 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16%3B~short repeat of unknown function (DUF308)%3B cl15828 gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0915 SN35N_0916 SN35N_0916 SN35N_0916 965848 967251 - argininosuccinate lyase active sites [active]%3B~argininosuccinate lyase (argininosuccinase%2C ASAL)%3B cd01359%3B~argininosuccinate lyase [Listeria monocytogenes]%3B~argininosuccinate lyase%3B provisional%3B~catalyzes the formation of arginine from (N-L-arginino)succinate%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~tetramer interface [polypeptide binding] gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0916 SN35N_0917 SN35N_0917 SN35N_0917 967251 968486 - argininosuccinate synthase ANP binding site [chemical binding]%3B~argininosuccinate synthase [Listeria monocytogenes]%3B~argininosuccinate synthase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~substrate binding site I [chemical binding]%3B~substrate binding site II [chemical binding] gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0917 SN35N_0918 SN35N_0918 SN35N_0918 968823 969299 - S-ribosylhomocysteinase S-ribosylhomocysteinase [Lactobacillus rhamnosus GG]%3B~S-ribosylhomocysteinase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0918 SN35N_0919 SN35N_0919 SN35N_0919 969360 972215 - excinuclease ABC subunit A ATP-binding cassette domain I of the excision repair protein UvrA%3B cd03270%3B~ATP-binding cassette domain II of the excision repair protein UvrA%3B cd03271%3B~excinuclease ABC subunit A [Lactobacillus rhamnosus GG]%3B~excinuclease ABC subunit A%3B reviewed%3B PRK00349%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0919 SN35N_0920 SN35N_0920 SN35N_0920 972250 974253 - excinuclease ABC subunit B ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~UvrB/uvrC motif%3B pfam02151%3B~excinuclease ABC subunit B [Lactobacillus rhamnosus GG]%3B~excinuclease ABC subunit B%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~myosin and kinesin motor domain. these ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes%3B cl00286%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~ultra-violet resistance protein B%3B pfam12344 gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0920 SN35N_0921 SN35N_0921 SN35N_0921 974402 975049 - hydrolase HD containing hydrolase-like enzyme%3B pfam12917%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~hydrolase [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0921 SN35N_0922 SN35N_0922 SN35N_0922 975155 976351 - MFS family major facilitator transporter MFS family major facilitator transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0922 SN35N_0923 SN35N_0923 aad aad 976521 977078 + D-alanyl-D-alanine dipeptidase D-ala-D-ala dipeptidase%3B cl00813%3B~D-alanyl-D-alanine dipeptidase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0923 SN35N_0924 SN35N_0924 nox2 nox2 977524 978882 - NADH oxidase NAD(P)-binding rossmann-like domain%3B cl17500%3B~NADH oxidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~coenzyme A disulfide reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0924 SN35N_0925 SN35N_0925 SN35N_0925 979036 979746 + diguanylate cyclase/phosphodiesterase EAL domain protein diguanylate cyclase/phosphodiesterase%2C EAL domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0925 SN35N_0926 SN35N_0926 SN35N_0926 979870 981597 - phosphoglucomutase/phosphomannomutase identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Enterococcus casseliflavus EC20%3B~phosphoglucomutase-2-like protein%3B provisional%3B~phosphoglucomutase/phosphomannomutase [Enterococcus casseliflavus EC20]%3B~substrate binding site [chemical binding] gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0926 SN35N_0927 SN35N_0927 SN35N_0927 981816 982268 + hypothetical protein hypothetical protein zj316_0824 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF3290)%3B pfam11694 gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0927 SN35N_0928 SN35N_0928 SN35N_0928 982269 982901 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein [function unknown] gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0928 SN35N_0929 SN35N_0929 SN35N_0929 983007 983945 - thioredoxin reductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~thioredoxin reductase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~thioredoxin-disulfide reductase%3B TIGR01292 gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0929 SN35N_0930 SN35N_0930 nox1 nox1 984138 985550 - NADH oxidase NADH oxidase [Lactobacillus plantarum ZJ316]%3B~coenzyme A disulfide reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0930 SN35N_0931 SN35N_0931 SN35N_0931 985942 986622 + diguanylate cyclase/phosphodiesterase EAL domain protein diguanylate cyclase/phosphodiesterase%2C EAL domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0931 SN35N_0932 SN35N_0932 galU galU 986720 987640 - UTP-glucose-1-phosphate uridylyltransferase UTP-glucose-1-phosphate uridylyltransferase [Carnobacterium maltaromaticum LMA28]%3B~[M] COG1210 UDP-glucose pyrophosphorylase%3B~dTDP-glucose pyrophosphorylase [cell envelope biogenesis%2C outer membrane]%3B COG1209%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Carnobacterium maltaromaticum LMA28%3B~prokaryotic UGPase catalyses the synthesis of UDP-glucose%3B cd02541%3B~tetramer interface gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0932 SN35N_0933 SN35N_0933 SN35N_0933 987684 988700 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Enterococcus faecium 1%2C231%2C408]%3B~NAD(P)H-dependent glycerol-3-phosphate dehydrogenase%3B validated%3B PRK00094%3B~NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus%3B pfam07479%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecium 1%2C231%2C408%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0933 SN35N_0934 SN35N_0934 SN35N_0934 988718 989566 - prolipoprotein diacylglyceryl transferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~prolipoprotein diacylglyceryl transferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~prolipoprotein diacylglyceryl transferase%3B cl00478 gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0934 SN35N_0935 SN35N_0935 SN35N_0935 989585 990532 - HPr kinase/phosphorylase HPr kinase/phosphorylase [Lactobacillus rhamnosus GG]%3B~HPr kinase/phosphorylase%3B provisional%3B~HPr serine kinase N terminus%3B pfam02603%3B~Hpr binding site%3B~homohexamer subunit interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0935 SN35N_0936 SN35N_0936 SN35N_0936 990678 991043 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted membrane protein [function unknown] gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0936 SN35N_0937 SN35N_0937 SN35N_0937 991065 991376 - stress-responsive transcription regulator PspC domain%3B pfam04024%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~stress-responsive transcription regulator [Lactobacillus plantarum ZJ316] gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0937 SN35N_0938 SN35N_0938 phoU phoU 991476 992150 - phosphate transport system protein PhoU domain%3B pfam01895%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphate transport system protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~phosphate transport system regulatory protein PhoU%3B TIGR02135 gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0938 SN35N_0939 SN35N_0939 SN35N_0939 992163 992918 - phosphate ABC transporter ATP-binding protein ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the phosphate transport system%3B cd03260%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphate ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]%3B~phosphate ABC transporter ATP-binding protein%3B provisional%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~walker A/P-loop%3B~walker B gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0939 SN35N_0940 SN35N_0940 pstB2-1 pstB2-1 992930 993739 - phosphate ABC transporter ATPase ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the phosphate transport system%3B cd03260%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri CD034%3B~phosphate ABC transporter ATPase [Lactobacillus buchneri CD034]%3B~phosphate transporter ATP-binding protein%3B provisional%3B~walker A/P-loop%3B~walker B gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0940 SN35N_0941 SN35N_0941 SN35N_0941 993754 994638 - phosphate ABC transporter permease ABC-ATPase subunit interface%3B~ABC-type phosphate transport system%2C permease component [inorganic ion transport and metabolism]%3B COG0581%3B~conserved gate region%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphate ABC transporter permease [Listeria monocytogenes]%3B~putative PBP binding loops gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0941 SN35N_0942 SN35N_0942 SN35N_0942 994628 995557 - phosphate ABC transporter permease ABC-ATPase subunit interface%3B~ABC-type phosphate transport system%2C permease component [inorganic ion transport and metabolism]%3B COG0573%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphate ABC transporter permease [Lactobacillus rhamnosus GG]%3B~putative PBP binding loops%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0942 SN35N_0943 SN35N_0943 SN35N_0943 995568 996443 - phosphate ABC transporter substrate-binding protein bacterial extracellular solute-binding protein%3B pfam13531%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphate ABC transporter substrate-binding protein [Lactobacillus rhamnosus GG]%3B~phosphate binding protein%3B TIGR02136%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0943 SN35N_0944 SN35N_0944 hpk3 hpk3 996787 998190 - histidine protein kinase%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~histidine protein kinase%3B sensor protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphate regulon sensor kinase PhoR%3B TIGR02966%3B~phosphorylation site [posttranslational modification] gene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0944 SN35N_0945 SN35N_0945 rrp3 rrp3 998183 998905 - two-component system response regulator%2C phosphate transport regulon DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~two-component system response regulator%2Cphosphate transport regulon [Lactobacillus plantarum ZJ316] gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0945 SN35N_0946 SN35N_0946 SN35N_0946 998911 1000086 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0946 SN35N_0947 SN35N_0947 SN35N_0947 1000270 1001343 - peptide chain release factor 2 RF-1 domain%3B cl02875%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~peptide chain release factor 2 [Enterococcus casseliflavus EC20]%3B~peptide chain release factor 2%3B provisional gene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0947 SN35N_0948 SN35N_0948 SN35N_0948 1001492 1003855 - preprotein translocase subunit SecA ATP-binding site [chemical binding]%3B~SecA preprotein cross-linking domain%3B cl03078%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~preprotein translocase subunit SecA [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~preprotein translocase subunit SecA%3B reviewed%3B PRK12906 gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0948 SN35N_0949 SN35N_0949 SN35N_0949 1004242 1004808 - ribosome-associated protein Y 30S subunit binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~ribosome-associated protein Y [Lactobacillus gasseri ATCC 33323] gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0949 SN35N_0950 SN35N_0950 SN35N_0950 1004942 1005385 - late competence protein identified by MetaGeneAnnotator%3B putative%3B~late competence protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~predicted amidophosphoribosyltransferases [general function prediction only]%3B COG1040 gene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0950 SN35N_0951 SN35N_0951 comFA comFA 1005576 1006928 - late competence protein%2C ATP-dependent DNA helicase/translocase ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~identified by MetaGeneAnnotator%3B putative%3B~late competence protein%2C ATP-dependent DNA helicase /translocase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative Mg++ binding site [ion binding]%3B~superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication%2C recombination%2C and repair]%3B COG4098 gene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0951 SN35N_0952 SN35N_0952 SN35N_0952 1006995 1007642 + hypothetical protein domain of unknown function (DUF1949)%3B pfam09186%3B~hypothetical protein zj316_0798 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown]%3B~uncharacterized protein family UPF0029%3B pfam01205 gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0952 SN35N_0953 SN35N_0953 SN35N_0953 1007833 1008735 - phosphate ABC transporter substrate-binding protein PBP superfamily domain%3B cl17296%3B~bacterial extracellular solute-binding protein%3B pfam13531%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphate ABC transporter substrate-binding protein [Listeria monocytogenes] gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0953 SN35N_0954 SN35N_0954 tagO tagO 1009060 1010157 - undecaprenyl-phosphate N-acetyl-glucosaminyl transferase Mg++ binding site [ion binding]%3B~UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase [cell envelope biogenesis%2C outer membrane]%3B COG0472%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative catalytic motif [active]%3B~substrate binding site [chemical binding]%3B~undecaprenyl-phosphate N-acetyl-glucosaminyl transferase [Lactobacillus plantarum ZJ316] gene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0954 SN35N_0955 SN35N_0955 SN35N_0955 1010373 1012208 - amino acid transporter amino acid permease%3B pfam13520%3B~amino acid transporter [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0955 SN35N_0956 SN35N_0956 groEL groEL 1012458 1014083 - chaperonin GroEL ATP/Mg binding site [chemical binding]%3B~chaperonin GroEL [Lactobacillus rhamnosus GG]%3B~chaperonin GroEL%3B reviewed%3B PRK12849%3B~hinge regions%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~ring oligomerisation interface [polypeptide binding]%3B~stacking interactions gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0956 SN35N_0957 SN35N_0957 groES groES 1014139 1014423 - co-chaperonin GroES co-chaperonin GroES [Listeria innocua Clip11262]%3B~identified by MetaGeneAnnotator%3B putative%3B~mobile loop%3B~oligomerisation interface [polypeptide binding]%3B~organism:Listeria innocua Clip11262%3B~roof hairpin gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0957 SN35N_0958 SN35N_0958 SN35N_0958 1014616 1015260 + CAAX family protease CAAX family protease [Lactobacillus plantarum subsp. plantarum P-8]%3B~CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0958 SN35N_0959 SN35N_0959 SN35N_0959 1015425 1016102 - redox-sensing transcriptional repressor rex identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative DNA-binding protein N-terminus%3B pfam06971%3B~redox-sensing transcriptional repressor Rex%3B provisional%3B~redox-sensing transcriptional repressor rex [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0959 SN35N_0960 SN35N_0960 SN35N_0960 1016271 1018253 + ABC transporter%2C ATP-binding protein ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~ABC transporter%3B pfam12848%3B~ATP-binding cassette domain of elongation factor 3%2C subfamily F%3B cd03221%3B~ATPase components of ABC transporters with duplicated ATPase domains [general function prediction only]%3B COG0488%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0960 SN35N_0961 SN35N_0961 gcp gcp 1019140 1020177 - O-sialoglycoprotein endopeptidase O-sialoglycoprotein endopeptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~UGMP family protein%3B validated%3B~carbamoyltransferase%3B pfam02543%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~tRNA threonylcarbamoyl adenosine modification protein YeaZ%3B TIGR03725 gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0961 SN35N_0962 SN35N_0962 rimI2 rimI2 1020191 1020646 - ribosomal-protein-alanine N-acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosomal-protein-alanine N-acetyltransferase [Lactobacillus plantarum ZJ316]%3B~ribosomal-protein-alanine acetyltransferase%3B TIGR01575 gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0962 SN35N_0963 SN35N_0963 rimI1 rimI1 1020639 1021184 - ribosomal-protein-alanine N-acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~ribosomal-protein-alanine N-acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~ribosomal-protein-alanine acetyltransferase%3B TIGR01575 gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0963 SN35N_0964 SN35N_0964 gpp gpp 1021201 1021926 - glycoprotein endopeptidase%2C M22 family glycoprotease family%3B pfam00814%3B~glycoprotein endopeptidase%2C M22 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tRNA threonylcarbamoyl adenosine modification protein YeaZ%3B TIGR03725 gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0964 SN35N_0965 SN35N_0965 phnD phnD 1022206 1023258 + phosphonate ABC superfamily ATP binding cassette transporter%2C binding protein ABC transporter%2C phosphonate%2C periplasmic substrate-binding protein%3B pfam12974%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphonate ABC superfamily ATP binding cassette transporter%2C binding protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0965 SN35N_0966 SN35N_0966 phnC phnC 1023296 1024066 + osphonates import ATP-binding protein PhnC ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the binding protein-dependent phosphonate transport system%3B cd03256%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~osphonates import ATP-binding protein PhnC [Lactobacillus plantarum ZJ316]%3B~phosphonate ABC transporter%2C ATP-binding protein%3B TIGR02315%3B~walker A/P-loop%3B~walker B gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0966 SN35N_0967 SN35N_0967 phnE2 phnE2 1024056 1024859 + phosphonates ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphonate ABC transporter%2C permease protein PhnE%3B TIGR01097%3B~phosphonates ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316] gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0967 SN35N_0968 SN35N_0968 phnE1 phnE1 1024856 1025710 + phosphonates ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphonate ABC transporter%2C permease protein PhnE%3B TIGR01097%3B~phosphonates ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316] gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0968 SN35N_0969 SN35N_0969 phnX phnX 1025735 1026532 + phosphonoacetaldehyde hydrolase identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphonoacetaldehyde hydrolase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~phosphonoacetaldehyde hydrolase%3B TIGR01422 gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0969 SN35N_0970 SN35N_0970 phnW phnW 1026554 1027654 + (2-aminoethyl)phosphonate-pyruvate aminotransferase (2-aminoethyl)phosphonate-pyruvate aminotransferase [Lactobacillus plantarum WCFS1]%3B~2-aminoethylphosphonate--pyruvate transaminase%3B TIGR02326%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyridoxal 5'-phosphate binding pocket [chemical binding] gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0970 SN35N_0971 SN35N_0971 galE1 galE1 1027788 1028783 - UDP-glucose 4-epimerase NAD binding site [chemical binding]%3B~UDP-glucose 4 epimerase%2C subgroup 1%2C extended (e) SDRs%3B cd05247%3B~UDP-glucose 4-epimerase [Lactobacillus plantarum ZJ316]%3B~UDP-glucose 4-epimerase [cell envelope biogenesis%2C outer membrane]%3B COG1087%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding] gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0971 SN35N_0972 SN35N_0972 SN35N_0972 1028922 1029707 - acyl-[acyl-carrier protein] thioesterase acyl-ACP thioesterase%3B pfam01643%3B~acyl-[acyl-carrier protein] thioesterase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0972 SN35N_0973 SN35N_0973 SN35N_0973 1029711 1030607 - methyltransferase identified by MetaGeneAnnotator%3B putative%3B~methyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted methyltransferases [general function prediction only]%3B~putative SAM binding site [chemical binding]%3B~putative homodimer interface [polypeptide binding]%3B~ribosomal RNA small subunit methyltransferase I%2C also known as rRNA (cytidine-2'-O-)-methyltransferase RsmI%3B cd11648 gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0973 SN35N_0974 SN35N_0974 SN35N_0974 1030706 1031053 - initiation-control protein yabA identified by MetaGeneAnnotator%3B putative%3B~initiation-control protein yabA [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF972)%3B pfam06156 gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0974 SN35N_0975 SN35N_0975 holB holB 1031078 1032097 - DNA-directed DNA polymerase III delta' subunit DNA polymerase III subunit delta'%3B validated%3B~DNA-directed DNA polymerase III%2C delta' subunit [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0975 SN35N_0976 SN35N_0976 SN35N_0976 1032114 1032443 - hypothetical protein hypothetical protein zj316_0772 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF970)%3B pfam06153 gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0976 SN35N_0977 SN35N_0977 tmk tmk 1032440 1033105 - thymidylate kinase ATP-binding site [chemical binding]%3B~TMP-binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~thymidylate kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~thymidylate kinase%3B validated%3B PRK00698 gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0977 SN35N_0978 SN35N_0978 SN35N_0978 1033504 1033755 - hypothetical protein hypothetical protein zj316_0770 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2508)%3B pfam10704 gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0978 SN35N_0979 SN35N_0979 recR recR 1033770 1034369 - recombination protein RecR RecR protein%3B pfam02132%3B~identified by MetaGeneAnnotator%3B putative%3B~involved in a recombinational process of DNA repair%2C independent of the recBC complex%3B~organism:Lactobacillus rhamnosus GG%3B~putative active site [active]%3B~putative metal-binding site [ion binding]%3B~recombination protein RecR [Lactobacillus rhamnosus GG]%3B~recombination protein RecR%3B reviewed%3B PRK00076%3B~tetramer interface [polypeptide binding] gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0979 SN35N_0980 SN35N_0980 SN35N_0980 1034385 1034693 - nucleoid-associated protein hypothetical protein%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoid-associated protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0980 SN35N_0981 SN35N_0981 dnaX dnaX 1034715 1036412 - DNA-directed DNA polymerase III gamma/tau subunit ATP binding site [chemical binding]%3B~DNA polymerase III subunit delta'%3B validated%3B~DNA polymerase III subunits gamma and tau domain III%3B pfam12169%3B~DNA polymerase III subunits gamma and tau%3B validated%3B~DNA-directed DNA polymerase III%2C gamma/tau subunit [Lactobacillus plantarum JDM1]%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A motif%3B~walker B motif gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0981 SN35N_0982 SN35N_0982 SN35N_0982 1036938 1037444 - cytidine/deoxycytidylate deaminase catalytic motif [active]%3B~cytidine/deoxycytidylate deaminase [Lactobacillus plantarum ZJ316]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoside/Zn binding site%3B~organism:Lactobacillus plantarum ZJ316 gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0982 SN35N_0983 SN35N_0983 rsmC rsmC 1037447 1038055 - methyltransferase 16S RNA G1207 methylase RsmC [translation%2C ribosomal structure and biogenesis]%3B COG2813%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0983 SN35N_0984 SN35N_0984 nrdH nrdH 1038278 1038508 + glutaredoxin-like protein NrdH catalytic residues [active]%3B~glutaredoxin-like protein NrdH [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0984 SN35N_0985 SN35N_0985 SN35N_0985 1038647 1040812 + ribonucleoside-diphosphate reductase subunit alpha R2 peptide binding site%3B~catalytic residues [active]%3B~class I ribonucleotide reductase%3B cd01679%3B~dimer interface [polypeptide binding]%3B~effector binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B%3B~ribonucleoside-diphosphate reductase subunit alpha [Streptococcus pneumoniae 670-6B]%3B~ribonucleotide reductase N-terminal%3B pfam08343%3B~ribonucleotide-diphosphate reductase subunit alpha%3B validated gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0985 SN35N_0986 SN35N_0986 nrdF nrdF 1040840 1041850 + ribonucleoside-diphosphate reductase%2C beta chain diiron center [ion binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative radical transfer pathway%3B~ribonucleoside-diphosphate reductase%2C beta chain [Lactobacillus plantarum ZJ316]%3B~ribonucleotide Reductase%2C R2/beta subunit%2C ferritin-like diiron-binding domain%3B cd01049%3B~ribonucleotide-diphosphate reductase subunit beta%3B provisional%3B PRK13966%3B~tyrosyl radical gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0986 SN35N_0987 SN35N_0987 SN35N_0987 1041932 1042507 + lysine decarboxylase identified by MetaGeneAnnotator%3B putative%3B~lysine decarboxylase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~possible lysine decarboxylase%3B cl00695 gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0987 SN35N_0988 SN35N_0988 SN35N_0988 1042682 1045285 - lysyl-tRNA synthetase identified by MetaGeneAnnotator%3B putative%3B~lysyl-tRNA synthetase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted integral membrane protein [function unknown]%3B~uncharacterized conserved protein (DUF2156)%3B pfam09924%3B~uncharacterized conserved protein [function unknown] gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0988 SN35N_0989 SN35N_0989 SN35N_0989 1045589 1046257 + cell surface protein%2C lipoprotein precursor cell surface protein%2C lipoprotein precursor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0989 SN35N_0990 SN35N_0990 SN35N_0990 1046270 1047247 + DNA entry nuclease DNA entry nuclease [Lactobacillus plantarum WCFS1]%3B~DNA/RNA non-specific endonuclease%3B pfam13930%3B~DNA/RNA non-specific endonuclease%3B smart00892%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized membrane protein [function unknown]%3B cl02250 gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0990 SN35N_0991 SN35N_0991 SN35N_0991 1048198 1048569 - prophage Lp2 protein 58 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 58 [Lactobacillus plantarum subsp. plantarum P-8] gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0991 SN35N_0992 SN35N_0992 SN35N_0992 1048581 1048844 - hypothetical protein haemolysin XhlA%3B pfam10779%3B~hypothetical protein zj316_2036 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0992 SN35N_0993 SN35N_0993 SN35N_0993 1048844 1050007 - prophage Lp1 protein 58%2C lysin FOG: LysM repeat [cell envelope biogenesis%2C outer membrane]%3B COG1388%3B~bacterial SH3 domain%3B pfam08460%3B~glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp1 protein 58%2C lysin [Lactobacillus plantarum subsp. plantarum P-8] gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0993 SN35N_0994 SN35N_0994 SN35N_0994 1050021 1050236 - prophage P2a protein 54 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P2a protein 54 [Lactobacillus plantarum ZJ316] gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0994 SN35N_0995 SN35N_0995 SN35N_0995 1050233 1051318 - prophage Lp2 protein 53 collagen triple helix repeat (20 copies)%3B pfam01391%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 53 [Lactobacillus plantarum subsp. plantarum P-8] gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0995 SN35N_0996 SN35N_0996 SN35N_0996 1051333 1051479 - prophage P1 protein 57 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0996 SN35N_0997 SN35N_0997 SN35N_0997 1051476 1051796 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0997 SN35N_0998 SN35N_0998 SN35N_0998 1051808 1052551 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0998 SN35N_0999 SN35N_0999 SN35N_0999 1052565 1054406 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_0999 SN35N_1000 SN35N_1000 SN35N_1000 1054407 1054700 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1000 SN35N_1001 SN35N_1001 SN35N_1001 1054690 1054956 - prophage P2a protein 51 ATP-dependent DNA helicase PcrA%3B TIGR01073%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2a protein 51 [Lactobacillus plantarum WCFS1] gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1001 SN35N_1002 SN35N_1002 SN35N_1002 1054953 1056074 - prophage P2a protein 50 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2a protein 50 [Lactobacillus plantarum WCFS1]%3B~prophage endopeptidase tail%3B pfam06605 gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1002 SN35N_1003 SN35N_1003 SN35N_1003 1056131 1057027 - prophage P2a protein 49 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage tail protein%3B pfam05709%3B~prophage P2a protein 49 [Lactobacillus plantarum 16 ] gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1003 SN35N_1004 SN35N_1004 SN35N_1004 1057037 1061272 - prophage Lp1 protein 50 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phage-related tail protein [function unknown]%3B~prophage Lp1 protein 50 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1004 SN35N_1005 SN35N_1005 SN35N_1005 1061272 1061508 - prophage P2a protein 47 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2a protein 47 [Lactobacillus plantarum WCFS1] gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1005 SN35N_1006 SN35N_1006 SN35N_1006 1061577 1062089 - prophage P1 protein 48 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phage protein%3B pfam12363%3B~prophage P1 protein 48 [Lactobacillus plantarum WCFS1] gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1006 SN35N_1007 SN35N_1007 SN35N_1007 1062107 1062697 - prophage Lp2 protein 45 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 45 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1007 SN35N_1008 SN35N_1008 SN35N_1008 1062709 1063095 - prophage Lp2 protein 44 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 44 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1008 SN35N_1009 SN35N_1009 SN35N_1009 1063097 1063651 - prophage Lp2 protein 43 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 43 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1009 SN35N_1010 SN35N_1010 SN35N_1010 1063641 1063964 - prophage P1 protein 44 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P1 protein 44 [Lactobacillus plantarum 16] gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1010 SN35N_1011 SN35N_1011 SN35N_1011 1063969 1064319 - prophage P1 protein 43 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phage gp6-like head-tail connector protein%3B pfam05135%3B~prophage P1 protein 43 [Lactobacillus plantarum WCFS1] gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1011 SN35N_1012 SN35N_1012 SN35N_1012 1064334 1065404 - prophage P1 protein 42%2C major capsid protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 42%2C major capsid protein [Lactobacillus plantarum WCFS1] gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1012 SN35N_1013 SN35N_1013 SN35N_1013 1065418 1066065 - prophage P2a protein 39 domain of unknown function (DUF4355)%3B pfam14265%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P2a protein 39 [Lactobacillus plantarum 16 ] gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1013 SN35N_1014 SN35N_1014 SN35N_1014 1066174 1067118 - prophage P2a protein 38 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage Mu protein F like protein%3B cl10072%3B~prophage P2a protein 38 [Lactobacillus plantarum 16 ] gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1014 SN35N_1015 SN35N_1015 SN35N_1015 1067132 1068808 - prophage P1 protein 39%2C portal protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phage portal protein%2C SPP1 Gp6-like%3B pfam05133%3B~phage portal protein%2C SPP1 family%3B TIGR01538%3B~prophage P1 protein 39%2C portal protein [Lactobacillus plantarum WCFS1] gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1015 SN35N_1016 SN35N_1016 SN35N_1016 1068798 1070084 - prophage P2a protein 36 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage terminase large subunit%3B cl12054%3B~prophage P2a protein 36 [Lactobacillus plantarum 16 ]%3B~terminase-like family%3B pfam03237 gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1016 SN35N_1017 SN35N_1017 SN35N_1017 1070068 1070595 - terminase small subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~terminase small subunit [Lactobacillus plantarum subsp. plantarum ST-III]%3B~terminase small subunit%3B pfam03592 gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1017 SN35N_1018 SN35N_1018 SN35N_1018 1070635 1070898 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1018 SN35N_1019 SN35N_1019 SN35N_1019 1070885 1071049 - prophage P2a protein 32 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P2a protein 32 [Lactobacillus plantarum 16 ] gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1019 SN35N_1020 SN35N_1020 SN35N_1020 1071274 1071441 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1020 SN35N_1021 SN35N_1021 SN35N_1021 1071633 1072250 + hypothetical protein hypothetical protein zj316_2390 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1021 SN35N_1022 SN35N_1022 SN35N_1022 1072255 1072425 - hypothetical protein endopeptidase Clp ATP-binding regulatory subunit (clpX)%3B TIGR00382%3B~hypothetical protein zj316_2391 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1022 SN35N_1023 SN35N_1023 SN35N_1023 1072515 1072976 - prophage P1 protein 33%2C phage transcription regulator%2C ArpU family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage transcriptional regulator%2C ArpU family%3B TIGR01637%3B~prophage P1 protein 33%2C phage transcription regulat or%2C ArpU family [Lactobacillus plantarum ZJ316] gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1023 SN35N_1024 SN35N_1024 SN35N_1024 1073055 1073192 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri ATCC 11577 gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1024 SN35N_1025 SN35N_1025 SN35N_1025 1073220 1073480 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis (strain ATCC 367 / JC M 1170) gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1025 SN35N_1026 SN35N_1026 SN35N_1026 1073484 1073807 - putative uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage A2 gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1026 SN35N_1027 SN35N_1027 SN35N_1027 1073797 1074015 - hypothetical protein hypothetical protein LOCK919_2119 [Lactobacillus ca sei LOCK919]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei LOCK919 gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1027 SN35N_1028 SN35N_1028 SN35N_1028 1074090 1074407 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2025 gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1028 SN35N_1029 SN35N_1029 SN35N_1029 1074400 1074579 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1029 SN35N_1030 SN35N_1030 SN35N_1030 1074717 1074848 - prophage P1 protein 26 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 26 [Lactobacillus plantarum WCFS1] gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1030 SN35N_1031 SN35N_1031 SN35N_1031 1074851 1075081 - prophage P1 protein 25 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 25 [Lactobacillus plantarum WCFS1] gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1031 SN35N_1032 SN35N_1032 SN35N_1032 1075081 1075515 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus phage phiEF24C gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1032 SN35N_1033 SN35N_1033 SN35N_1033 1075512 1075889 - prophage Lp2 protein 24 endodeoxyribonuclease RusA%3B pfam05866%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 24 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1033 SN35N_1034 SN35N_1034 SN35N_1034 1075886 1076404 - prophage Lp2 protein 23 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 23 [Lactobacillus plantarum subsp. plantarum P-8] gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1034 SN35N_1035 SN35N_1035 SN35N_1035 1076409 1077131 - bacteriophage antirepressor AntA/AntB antirepressor%3B pfam08346%3B~bacteriophage antirepressor [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage antirepressor protein KilAC domain%3B pfam03374 gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1035 SN35N_1036 SN35N_1036 SN35N_1036 1077128 1077415 - prophage P2a protein 21 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P2a protein 21 [Lactobacillus plantarum 16 ] gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1036 SN35N_1037 SN35N_1037 SN35N_1037 1077412 1078365 - DnaD domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 4_3 gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1037 SN35N_1038 SN35N_1038 SN35N_1038 1078447 1079319 - prophage Lp1 protein 19 PDDEXK-like domain of unknown function (DUF3799)%3B pfam12684%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp1 protein 19 [Lactobacillus plantarum subsp. plantarum ST-III] gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1038 SN35N_1039 SN35N_1039 SN35N_1039 1079231 1080130 - recombination protein RecT PcfK-like protein%3B pfam14058%3B~RecT family%3B pfam03837%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~recombination protein RecT [Lactobacillus plantarum subsp. plantarum ST-III] gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1039 SN35N_1040 SN35N_1040 SN35N_1040 1080133 1080513 - prophage Lp1 protein 17 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage Lp1 protein 17 [Lactobacillus plantarum ZJ316] gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1040 SN35N_1041 SN35N_1041 SN35N_1041 1080510 1080686 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1041 SN35N_1042 SN35N_1042 SN35N_1042 1080655 1080783 - prophage P1 protein 16 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P1 protein 16 [Lactobacillus plantarum ZJ316] gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1042 SN35N_1043 SN35N_1043 SN35N_1043 1080893 1081180 - prophage P1 protein 15 helix-turn-helix domain%3B cl17695%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 15 [Lactobacillus plantarum WCFS1] gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1043 SN35N_1044 SN35N_1044 SN35N_1044 1081186 1081740 - prophage P1 protein 14 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 14 [Lactobacillus plantarum WCFS1] gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1044 SN35N_1045 SN35N_1045 SN35N_1045 1081801 1081983 - prophage P1 protein 13 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 13 [Lactobacillus plantarum WCFS1] gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1045 SN35N_1046 SN35N_1046 SN35N_1046 1082063 1082284 + hypothetical protein KEGG: sbn:Sbal195_2918 hypothetical protein%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Veillonella parvula DSM 2008%3B~uncharacterized protein conserved in bacteria (DUF2188)%3B pfam09954%3B~unnamed protein product [Veillonella parvula DSM 20 08] gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1046 SN35N_1047 SN35N_1047 SN35N_1047 1082281 1082481 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri ATCC 11577 gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1047 SN35N_1048 SN35N_1048 SN35N_1048 1082478 1082732 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus epidermidis BVS058A4 gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1048 SN35N_1049 SN35N_1049 SN35N_1049 1082874 1083392 + immunity repressor protein helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~immunity repressor protein [Lactobacillus plantarum ZJ316]%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1049 SN35N_1050 SN35N_1050 SN35N_1050 1083407 1083829 + hypothetical protein domain of unknown function (DUF955)%3B pfam06114%3B~hypothetical protein zj316_2407 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1050 SN35N_1051 SN35N_1051 SN35N_1051 1083934 1084776 + hypothetical protein hypothetical protein zj316_2409 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1051 SN35N_1052 SN35N_1052 SN35N_1052 1084797 1085726 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri CECT 5714 gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1052 SN35N_1053 SN35N_1053 SN35N_1053 1085709 1085900 - kinase domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Tetrahymena thermophila (strain SB210) gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1053 SN35N_1054 SN35N_1054 SN35N_1054 1086305 1087507 + prophage P1 protein 1%2C integrase DNA binding site [nucleotide binding]%3B~Int/Topo IB signature motif%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase [DNA replication%2C recombination%2C and repair]%3B COG0582%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 1%2C integrase [Lactobacillus plantarum WCFS1] gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1054 SN35N_1055 SN35N_1055 SN35N_1055 1087488 1087658 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1055 SN35N_1056 SN35N_1056 rplL rplL 1087659 1088027 - 50S ribosomal protein L7/L12 50S ribosomal protein L7/L12 [Lactobacillus helveticus DPC 4571]%3B~L10 interface [polypeptide binding]%3B~L11 interface [polypeptide binding]%3B~core dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~peripheral dimer interface [polypeptide binding]%3B~putative EF-G interaction site [polypeptide binding]%3B~putative EF-Tu interaction site [polypeptide binding] gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1056 SN35N_1057 SN35N_1057 rplJ rplJ 1088089 1088592 - 50S ribosomal protein L10 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L10 [Lactobacillus plantarum ZJ316]%3B~Interface with L7/L12 ribosomal proteins [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1057 SN35N_1058 SN35N_1058 rplA rplA 1088791 1089480 - 50S ribosomal protein L1 50S ribosomal protein L1 [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA%3B~mRNA/rRNA interface [nucleotide binding]%3B~organism:Lactobacillus rhamnosus GG gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1058 SN35N_1059 SN35N_1059 SN35N_1059 1089581 1090006 - 50S ribosomal protein L11 23S rRNA interface [nucleotide binding]%3B~50S ribosomal protein L11 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~50S ribosomal protein L11%3B validated%3B PRK00140%3B~L25 interface [polypeptide binding]%3B~L7/L12 interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative thiostrepton binding site gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1059 SN35N_1060 SN35N_1060 SN35N_1060 1090108 1090995 - cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1060 SN35N_1061 SN35N_1061 nusG nusG 1091023 1091571 - transcription antitermination protein nusG NusG contains an NGN domain at its N-terminus and KOW motif at its C-terminus%3B cd06091%3B~bacterial N-utilization substance G (NusG) N-terminal (NGN) domain%2C subgroup 1%3B cd09891%3B~heterodimer interface [polypeptide binding]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative homodimer interface [polypeptide binding]%3B~transcription antitermination protein NusG%3B validated%3B PRK05609%3B~transcription antitermination protein nusG [Lactobacillus plantarum ZJ316] gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1061 SN35N_1062 SN35N_1062 secE secE 1091676 1091861 - preprotein translocase%2C SecE subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~preprotein translocase subunit SecE%3B reviewed%3B PRK07597%3B~preprotein translocase%2C SecE subunit [Lactobacillus plantarum ZJ316] gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1062 SN35N_1063 SN35N_1063 rpmG rpmG 1091873 1092022 - 50S ribosomal protein L33 50S ribosomal protein L33 [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~ribosomal protein L33%3B cl00383 gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1063 SN35N_1064 SN35N_1064 sigH sigH 1092084 1092647 - DNA-directed RNA polymerase sigma factor 30 DNA-directed RNA polymerase%2C sigma factor 30 [Lactobacillus plantarum subsp. plantarum P-8]%3B~RNA polymerase factor sigma-70%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~sigma-70 region 2%3B pfam04542 gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1064 SN35N_1065 SN35N_1065 SN35N_1065 1093193 1093738 - nuclease%2C NYN_YacP family YacP-like NYN domain%3B pfam05991%3B~identified by MetaGeneAnnotator%3B putative%3B~nuclease%2C NYN_YacP family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1065 SN35N_1066 SN35N_1066 trmH trmH 1093740 1094507 - tRNA/rRNA methyltransferase RNA 2'-O ribose methyltransferase substrate binding%3B pfam08032%3B~SpoU rRNA methylase family%3B pfam00588%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rRNA methylase%2C putative%2C group 3%3B TIGR00186%3B~tRNA/rRNA methyltransferase [Lactobacillus plantarum ZJ316] gene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1066 SN35N_1067 SN35N_1067 yazC yazC 1094497 1094907 - ribonuclease III dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus rhamnosus GG%3B~ribonuclease III [Lactobacillus rhamnosus GG]%3B~ribonuclease III family protein [replication%2C recombination%2C and repair] gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1067 SN35N_1068 SN35N_1068 cysS cysS 1094909 1096321 - cysteinyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~anticodon binding site%3B~anticodon-binding domain of cysteinyl tRNA synthetases%3B cd07963%3B~catalytic core domain of cysteinyl tRNA synthetase%3B cd00672%3B~catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA%3B~cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~cysteinyl-tRNA synthetase%3B validated%3B PRK00260%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~tRNA binding surface [nucleotide binding] gene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1068 SN35N_1069 SN35N_1069 gltX gltX 1096599 1098089 - glutamyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~catalytic core domain of discriminating glutamyl-tRNA synthetase%3B cd00808%3B~charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation%3B~glutamyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~glutamyl-tRNA synthetase%3B reviewed%3B PRK01406%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1069 SN35N_1070 SN35N_1070 SN35N_1070 1098305 1098487 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1070 SN35N_1071 SN35N_1071 SN35N_1071 1098414 1099589 - ATPase%2C PilT family ATPase%2C PilT family [Lactobacillus plantarum ZJ316]%3B~PIN domain of thermus thermophilus Hb8%2C uncharacterized Bacillus subtilis YacL%2C and other bacterial homologs%3B cd09877%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein (PIN domain superfamily) [general function prediction only]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active] gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1071 SN35N_1072 SN35N_1072 radA radA 1099605 1100984 - DNA repair protein RadA ATP binding site [chemical binding]%3B~DNA repair protein RadA [Lactobacillus rhamnosus GG]%3B~DNA repair protein RadA%3B provisional%3B~Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~subunit ChlI of Mg-chelatase%3B pfam13541%3B~walker A motif/ATP binding site%3B~walker B motif gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1072 SN35N_1073 SN35N_1073 dut dut 1102110 1102646 - deoxyuridine 5'-triphosphate nucleotidohydrolase deoxyuridine 5'-triphosphate nucleotidohydrolase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~trimer interface [polypeptide binding]%3B~trimeric dUTP diphosphatases%3B cd07557 gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1073 SN35N_1074 SN35N_1074 SN35N_1074 1102785 1103081 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1074 SN35N_1075 SN35N_1075 rpiA rpiA 1103090 1103773 + ribose-5-phosphate isomerase A catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~ribose-5-phosphate isomerase A [Lactobacillus salivarius UCC118]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1075 SN35N_1076 SN35N_1076 SN35N_1076 1103849 1105180 + aminopeptidase C G bulge%3B~aminopeptidase C [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~trimer interface [polypeptide binding] gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1076 SN35N_1077 SN35N_1077 zmp2 zmp2 1105370 1105996 - extracellular zinc metalloproteinase extracellular zinc metalloproteinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~zinc-dependent metalloprotease%2C MMP_like subfamily. this group contains matrix metalloproteinases (MMPs)%2C serralysins%2C and the astacin_like family of proteases%3B cd04268 gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1077 SN35N_1078 SN35N_1078 SN35N_1078 1106549 1107472 + transposase%2C IS30 family COG: COG2826%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus reuteri I5007%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus reuteri I5007] gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1078 SN35N_1079 SN35N_1079 gpmA1 gpmA1 1107540 1108217 - 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 2%2C3-bisphosphoglycerate-dependent phosphoglycerate mutase 1 [Lactobacillus plantarum ZJ316]%3B~catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1079 SN35N_1080 SN35N_1080 SN35N_1080 1108367 1109392 - permease%2C drug/metabolite transporter (DMT) superfamily EamA-like transporter family%3B pfam00892%3B~carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~permease%2C drug/metabolite transporter (DMT) superfamily [Lactobacillus plantarum WCFS1] gene gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1080 SN35N_1081 SN35N_1081 mleP1 mleP1 1109825 1110787 - malate transport protein identified by MetaGeneAnnotator%3B putative%3B~malate transport protein [Lactobacillus plantarum ZJ316]%3B~membrane transport protein%3B pfam03547%3B~organism:Lactobacillus plantarum ZJ316 gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1081 SN35N_1082 SN35N_1082 SN35N_1082 1111097 1112290 + transcriptional attenuator%2C cell envelope-related%2C LytR family cell envelope-related transcriptional attenuator domain%3B cl00581%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcriptional attenuator%2C cell envelope-related%2C LytR family [Lactobacillus plantarum ZJ316] gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1082 SN35N_1083 SN35N_1083 accA1 accA1 1112358 1113131 - acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha acetyl-CoA carboxylase alpha subunit [lipid metabolism]%3B cl17345%3B~acetyl-CoA carboxylase%2C carboxyl transferase subunit alpha [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1083 SN35N_1084 SN35N_1084 SN35N_1084 1113124 1113927 - acetyl-CoA carboxylase%2C carboxyl transferase subunit beta acetyl-CoA carboxylase%2C carboxyl transferase subunit beta [Lactobacillus plantarum 16]%3B~acetyl-CoA carboxylase%2C carboxyl transferase%2C beta subunit%3B TIGR00515%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~oxyanion hole (OAH) forming residues%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1084 SN35N_1085 SN35N_1085 accC1 accC1 1113924 1115246 - acetyl-CoA carboxylase%2C biotin carboxylase subunit ATP-grasp domain%3B cl17255%3B~acetyl-CoA carboxylase biotin carboxylase subunit%3B validated%3B~acetyl-CoA carboxylase%2C biotin carboxylase subunit [Lactobacillus plantarum ZJ316]%3B~biotin carboxylase C-terminal domain%3B smart00878%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1085 SN35N_1086 SN35N_1086 accB1 accB1 1115249 1115650 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein acetyl-CoA carboxylase%2C biotin carboxyl carrier protein [Lactobacillus plantarum ZJ316]%3B~biotin carboxyl carrier protein [lipid metabolism]%3B COG0511%3B~biotinylation site [posttranslational modification]%3B~carboxyltransferase (CT) interaction site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1086 SN35N_1087 SN35N_1087 fabH1 fabH1 1115661 1116632 - 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 3-oxoacyl-(acyl carrier protein) synthase III%3B reviewed%3B~3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1 [Lactobacillus plantarum ZJ316]%3B~CoA binding pocket [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1087 SN35N_1088 SN35N_1088 pts10B pts10B 1116796 1117314 - PTS system%2C mannose-specific EIIB component PTS system%2C mannose-specific EIIB component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1088 SN35N_1089 SN35N_1089 pts10A pts10A 1117311 1117730 - PTS system%2C mannose-specific EIIAcomponent PTS system%2C mannose-specific EIIAcomponent [Lactobacillus plantarum ZJ316]%3B~active pocket/dimerization site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1089 SN35N_1090 SN35N_1090 SN35N_1090 1117801 1120650 - transcription regulator ATP binding site [chemical binding]%3B~PRD domain%3B pfam00874%3B~active pocket/dimerization site%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional antiterminator [transcription]%3B~transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [transcription / signal transduction mechanisms]%3B COG1221%3B~walker A motif%3B~walker B motif gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1090 SN35N_1091 SN35N_1091 SN35N_1091 1120956 1121342 - hypothetical protein domain of unknown function (DUF956)%3B pfam06115%3B~hypothetical protein zj316_0722 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1091 SN35N_1092 SN35N_1092 SN35N_1092 1121471 1122403 - PTS mannose transporter subunit IID PTS mannose transporter subunit IID [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphotransferase system%2C mannose/fructose/N-acetylgalactosamine-specific component IID [carbohydrate transport and metabolism]%3B COG3716 gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1092 SN35N_1093 SN35N_1093 SN35N_1093 1122422 1123228 - PTS alpha-glucoside transporter subunit IIBC PTS alpha-glucoside transporter subunit IIBC [Liste ria monocytogenes]%3B~PTS system mannose-specific transporter subunit IIC%3B provisional%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1093 SN35N_1094 SN35N_1094 SN35N_1094 1123264 1124238 - mannose PTS%2C EIIAB PTS system mannose-specific transporter subunits IIAB%3B provisional%3B~active pocket/dimerization site%3B~identified by MetaGeneAnnotator%3B putative%3B~mannose PTS%2C EIIAB [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphorylation site [posttranslational modification] gene gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1094 SN35N_1095 SN35N_1095 SN35N_1095 1124529 1125350 - extracellular protein extracellular protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active] gene gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1095 SN35N_1096 SN35N_1096 thrB thrB 1125755 1126630 - homoserine kinase GHMP kinases N terminal domain%3B pfam00288%3B~homoserine kinase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~homoserine kinase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1096 SN35N_1097 SN35N_1097 hom2 hom2 1126639 1127925 - homoserine dehydrogenase ACT_HSDH_Hom CD includes the C-terminal ACT domain of the NAD(P)H-dependent%2C homoserine dehydrogenase (HSDH) and related domains%3B cd04881%3B~homoserine dehydrogenase [Lactobacillus plantarum ZJ316]%3B~homoserine dehydrogenase%2C NAD binding domain%3B pfam03447%3B~homoserine dehydrogenase%3B pfam00742%3B~homoserine dehydrogenase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1097 SN35N_1098 SN35N_1098 SN35N_1098 1127991 1128437 - SprT family metallopeptidase SprT family metallopeptidase [Lactobacillus plantarum WCFS1]%3B~SprT homologues%3B cl01182%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1098 SN35N_1099 SN35N_1099 tex tex 1128437 1130608 - transcription accessory protein%2C contains S1 RNA binding domain RNA binding site [nucleotide binding]%3B~Tex-like protein N-terminal domain%3B pfam09371%3B~identified by MetaGeneAnnotator%3B putative%3B~likely ribonuclease with RNase H fold%3B smart00732%3B~organism:Lactobacillus plantarum WCFS1%3B~transcription accessory protein%2C contains S1 RNA binding domain [Lactobacillus plantarum WCFS1]%3B~transcriptional accessory protein [transcription]%3B COG2183 gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1099 SN35N_1100 SN35N_1100 SN35N_1100 1130902 1131336 - hypothetical protein hypothetical protein zj316_0713 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1100 SN35N_1101 SN35N_1101 SN35N_1101 1131391 1134066 - E1-E2 family cation-transporting ATPase E1-E2 ATPase%3B pfam00122%3B~E1-E2 family cation-transporting ATPase [Streptococcus pneumoniae G54]%3B~cation transport ATPase [inorganic ion transport and metabolism]%3B COG0474%3B~cation transporter/ATPase%2C N-terminus%3B smart00831%3B~cation transporting ATPase%2C C-terminus%3B pfam00689%3B~haloacid dehalogenase-like hydrolase%3B pfam12710%3B~identified by MetaGeneAnnotator%3B putative%3B~identified by match to protein family HMM PF00122%3B match to protein family HMM PF00689%3B match to protein family HMM PF00690%3B match to protein family HMM PF00702%3B match to protein family HMM TIGR01494%3B~organism:Streptococcus pneumoniae G54%3B~putative hydrolase of sodium-potassium ATPase alpha subunit%3B pfam13246%3B~resistant to macrolides and tetracylcine gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1101 SN35N_1102 SN35N_1102 nadE nadE 1134501 1135328 - NH(3)-dependent NAD(+) synthetase ATP binding pocket [chemical binding]%3B~Mg binding site [ion binding]%3B~NAD binding pocket [chemical binding]%3B~NAD synthase [coenzyme metabolism]%3B COG0171%3B~NH(3)-dependent NAD(+) synthetase [Lactobacillus plantarum ZJ316]%3B~active-site loop [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1102 SN35N_1103 SN35N_1103 SN35N_1103 1135328 1136806 - nicotinate phosphoribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~nicotinate phosphoribosyltransferase [Enterococcus casseliflavus EC20]%3B~nicotinate phosphoribosyltransferase%3B validated%3B~organism:Enterococcus casseliflavus EC20 gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1103 SN35N_1104 SN35N_1104 tagA tagA 1136963 1137700 + teichoic acid biosynthesis protein A identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~teichoic acid biosynthesis protein A [Lactobacillus plantarum JDM1]%3B~teichoic acid biosynthesis proteins [cell envelope biogenesis%2C outer membrane]%3B COG1922 gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1104 SN35N_1105 SN35N_1105 SN35N_1105 1137870 1138571 - transcriptional regulator DNA-binding site [nucleotide binding]%3B~UTRA domain%3B cl01230%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~transcriptional regulator [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1105 SN35N_1106 SN35N_1106 SN35N_1106 1138595 1139731 - N-acetylglucosamine-6-phosphate deacetylase N-acetylglucosamine-6-phosphate deacetylase [Lactobacillus rhamnosus GG]%3B~N-acetylglucosamine-6-phosphate deacetylase [carbohydrate transport and metabolism]%3B COG1820%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1106 SN35N_1107 SN35N_1107 proC proC 1139810 1140601 - pyrroline-5-carboxylate reductase NADP oxidoreductase%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyrroline-5-carboxylate reductase [Lactobacillus plantarum ZJ316]%3B~pyrroline-5-carboxylate reductase [amino acid transport and metabolism]%3B COG0345 gene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1107 SN35N_1108 SN35N_1108 pnuC2 pnuC2 1140962 1141783 + ribosyl nicotinamide transporter%2C PnuC-like protein identified by MetaGeneAnnotator%3B putative%3B~nicotinamide mononucleotide transporter%3B pfam04973%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosyl nicotinamide transporter%2C PnuC-like protein [Lactobacillus plantarum ZJ316] gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1108 SN35N_1109 SN35N_1109 SN35N_1109 1141976 1143082 + di-and tricarboxylate transporter Na+/H+ antiporter NhaD and related arsenite permeases [inorganic ion transport and metabolism]%3B COG1055%3B~di-and tricarboxylate transporter [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transmembrane helices gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1109 SN35N_1110 SN35N_1110 SN35N_1110 1143241 1144083 - serine/threonine protein phosphatase calcineurin-like phosphoesterase%3B pfam00149%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoprotein phosphatases of the metallophosphatase superfamily%2C metallophosphatase domain%3B cd00144%3B~serine/threonine protein phosphatase [Lactobacillus plantarum ZJ316] gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1110 SN35N_1111 SN35N_1111 SN35N_1111 1144118 1144453 - hypothetical protein hypothetical protein zj316_0702 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein%2C contains double-stranded beta-helix domain [function unknown] gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1111 SN35N_1112 SN35N_1112 SN35N_1112 1144484 1144801 - hypothetical protein cupin domain%3B cl17218%3B~hypothetical protein zj316_0701 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1112 SN35N_1113 SN35N_1113 SN35N_1113 1145188 1145646 - hypothetical protein hypothetical protein zj316_0699 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1113 SN35N_1114 SN35N_1114 SGPL1 SGPL1 1146255 1146461 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Felis catus gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1114 SN35N_1115 SN35N_1115 SN35N_1115 1146773 1147309 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1115 SN35N_1116 SN35N_1116 SN35N_1116 1147394 1147834 - IS30 family transposase IS30 family transposase [Lactobacillus brevis ATCC 367]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 367%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1116 SN35N_1117 SN35N_1117 SN35N_1117 1147815 1148438 - probable transposase for insertion-like sequence element IS1161 helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus brevis KB290%3B~probable transposase for insertion-like sequence el ement IS1161 [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1117 SN35N_1118 SN35N_1118 SN35N_1118 1148806 1150404 + putative amino acid transporter amino acid transporter%3B TIGR00909%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228%3B~putative amino acid transporter [Staphylococcus aureus subsp. aureus ST228] gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1118 SN35N_1119 SN35N_1119 SN35N_1119 1150612 1151535 + transposase%2C IS30 family COG: COG2826%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus reuteri I5007%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus reuteri I5007] gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1119 SN35N_1120 SN35N_1120 SN35N_1120 1152014 1152340 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus MP-10 gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1120 SN35N_1121 SN35N_1121 SN35N_1121 1153373 1153786 - prophage P3 protein 12 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 12 [Lactobacillus plantarum WCFS1] gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1121 SN35N_1122 SN35N_1122 SN35N_1122 1153788 1154162 - prophage P3 protein 11%2C DNA replication identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 11%2C DNA replication [Lactobacillus plantarum WCFS1] gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1122 SN35N_1123 SN35N_1123 SN35N_1123 1154773 1156191 - virulence-Associated E family protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290%3B~virulence-Associated E family protein [Lactobacillus brevis KB290]%3B~virulence-associated protein E%3B pfam05272 gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1123 SN35N_1124 SN35N_1124 SN35N_1124 1156203 1156982 - prophage P3 protein 7%2C DNA replication DNA-binding residues [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~polymerase nucleotide-binding site%3B~primase C terminal 1 (PriCT-1)%3B pfam08708%3B~primase nucleotide-binding site [nucleotide binding]%3B~prophage P3 protein 7%2C DNA replication [Lactobacillus plantarum WCFS1] gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1124 SN35N_1125 SN35N_1125 SN35N_1125 1156995 1157216 - prophage P3 protein 6 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 6 [Lactobacillus plantarum WCFS1] gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1125 SN35N_1126 SN35N_1126 SN35N_1126 1157209 1157631 - prophage P3 protein 5 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 5 [Lactobacillus plantarum WCFS1] gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1126 SN35N_1127 SN35N_1127 SN35N_1127 1157944 1158237 - prophage P3 protein 4 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 4 [Lactobacillus plantarum WCFS1] gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1127 SN35N_1128 SN35N_1128 SN35N_1128 1158264 1158950 - prophage Lp4 protein 3%2C phage-like repressor identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus MP-10 gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1128 SN35N_1129 SN35N_1129 SN35N_1129 1158963 1159157 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1129 SN35N_1130 SN35N_1130 SN35N_1130 1159280 1159696 + prophage P3 protein 2%2C CI-like repressor helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 2%2C CI-like repressor [Lactobacillus plantarum WCFS1]%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1130 SN35N_1131 SN35N_1131 SN35N_1131 1159746 1160891 + prophage P3 protein 1%2C integrase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase [DNA replication%2C recombination%2C and repair]%3B COG0582%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P3 protein 1%2C integrase [Lactobacillus plantarum WCFS1] gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1131 SN35N_1132 SN35N_1132 SN35N_1132 1161284 1162117 - phosphoesterase calcineurin-like phosphoesterase%3B pfam00149%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoesterase [Lactobacillus plantarum ZJ316]%3B~putative phosphoesterase%3B TIGR03729 gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1132 SN35N_1133 SN35N_1133 SN35N_1133 1162181 1163653 - dipeptide/tripeptide transport protein POT family%3B cl17359%3B~dipeptide/tripeptide permease [amino acid transport and metabolism]%3B COG3104%3B~dipeptide/tripeptide transport protein [Lactobacillus fermentum CECT 5716]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fermentum CECT 5716 gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1133 SN35N_1134 SN35N_1134 SN35N_1134 1170201 1171700 - lysyl-tRNA synthetase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~lysyl-tRNA synthetase%3B reviewed%3B PRK00484%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative anticodon binding site gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1134 SN35N_1135 SN35N_1135 SN35N_1135 1171804 1172811 - tRNA-dihydrouridine synthase FMN binding site [chemical binding]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative TIM-barrel protein%2C nifR3 family%3B TIGR00737%3B~substrate binding site [chemical binding]%3B~tRNA-dihydrouridine synthase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1135 SN35N_1136 SN35N_1136 hslO hslO 1172811 1173698 - 33 kDa chaperonin 33 kDa chaperonin [Lactobacillus plantarum ZJ316]%3B~Hsp33-like chaperonin%3B reviewed%3B PRK00114%3B~dimerization interface [polypeptide binding]%3B~domain crossover interface%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~redox-dependent activation switch gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1136 SN35N_1137 SN35N_1137 SN35N_1137 1173847 1176084 - ATP-dependent Zn protease ATP binding site [chemical binding]%3B~ATP-dependent Zn protease [Lactobacillus gasseri ATCC 33323]%3B~ATP-dependent metalloprotease FtsH%3B TIGR01241%3B~FtsH extracellular%3B pfam06480%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~peptidase family M41%3B pfam01434%3B~walker A motif%3B~walker B motif gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1137 SN35N_1138 SN35N_1138 SN35N_1138 1176164 1176706 - hypoxanthine phosphoribosyltransferase derived by automated computational analysis using gene prediction method: GeneMarkS+.%3B~hypoxanthine phosphoribosyltransferase [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [nucleotide transport and metabolism]%3B COG2065 gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1138 SN35N_1139 SN35N_1139 tilS tilS 1176726 1178072 - tRNA(Ile)-lysidine synthase TilS substrate C-terminal domain%3B smart00977%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~tRNA(Ile)-lysidine synthase MesJ [cell cycle control%2C cell division%2C chromosome partitioning]%3B COG0037%3B~tRNA(Ile)-lysidine synthase [Lactobacillus plantarum ZJ316] gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1139 SN35N_1140 SN35N_1140 SN35N_1140 1178356 1178895 - RNA binding protein%2C contains ribosomal protein S1 domain RNA binding protein%2C contains ribosomal protein S1 domain [Lactobacillus plantarum ZJ316]%3B~RNA binding site [nucleotide binding]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1140 SN35N_1141 SN35N_1141 divIC divIC 1179020 1179418 - septum formation initiator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~septum formation initiator [Lactobacillus plantarum ZJ316]%3B~septum formation initiator [cell division and chromosome partitioning]%3B~septum formation initiator%3B pfam04977 gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1141 SN35N_1142 SN35N_1142 SN35N_1142 1179539 1179826 - bosome-associated heat shock protein RNA binding surface [nucleotide binding]%3B~bosome-associated heat shock protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1142 SN35N_1143 SN35N_1143 SN35N_1143 1179823 1181427 - polysaccharide transporter identified by MetaGeneAnnotator%3B putative%3B~membrane protein involved in the export of O-antigen and teichoic acid [general function prediction only]%3B COG2244%3B~organism:Lactobacillus plantarum WCFS1%3B~polysaccharide transporter [Lactobacillus plantarum WCFS1]%3B~stage V sporulation protein B%2C also known as stage III sporulation protein F%2C and related proteins%3B cd13124 gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1143 SN35N_1144 SN35N_1144 mfd mfd 1181602 1185129 - transcription-repair coupling factor ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~CarD-like/TRCF domain%3B smart01058%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~TRCF domain%3B pfam03461%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative Mg++ binding site [ion binding]%3B~transcription-repair coupling factor (superfamily II helicase) [DNA replication%2C recombination%2C and repair / transcription]%3B COG1197%3B~transcription-repair coupling factor [Lactobacillus plantarum WCFS1] gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1144 SN35N_1145 SN35N_1145 pth pth 1185149 1185706 - peptidyl-tRNA hydrolase catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peptidyl-tRNA hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative active site [active] gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1145 SN35N_1146 SN35N_1146 SN35N_1146 1186038 1187000 + L-lactate dehydrogenase L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases%3B cd05291%3B~L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~L-lactate dehydrogenase%3B reviewed%3B PRK00066%3B~NAD binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~substrate binding site [chemical binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1146 SN35N_1147 SN35N_1147 SN35N_1147 1187219 1188613 + ErfK/YbiS/YcfS/YnhG ErfK/YbiS/YcfS/YnhG [Lactobacillus plantarum subsp. plantarum P-8]%3B~L%2CD-transpeptidase catalytic domain%3B pfam03734%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative peptidoglycan binding domain%3B pfam12229 gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1147 SN35N_1148 SN35N_1148 SN35N_1148 1188768 1189406 + CBS domain-containing protein CBS domain-containing protein [Lactobacillus gasseri ATCC 33323]%3B~FOG: CBS domain [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1148 SN35N_1149 SN35N_1149 SN35N_1149 1189684 1190190 - transport protein%2C QueT family QueT transporter%3B pfam06177%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transport protein%2C QueT family [Lactobacillus plantarum WCFS1] gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1149 SN35N_1150 SN35N_1150 SN35N_1150 1190299 1191321 - ornithine carbamoyltransferase aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B pfam02729%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~ornithine carbamoyltransferase [Enterococcus casseliflavus EC20]%3B~ornithine carbamoyltransferase%3B validated%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1150 SN35N_1151 SN35N_1151 argD argD 1191314 1192483 - acetylornithine aminotransferase acetylornithine aminotransferase [Lactobacillus plantarum JDM1]%3B~acetylornithine aminotransferase%3B provisional%3B PRK02936%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~inhibitor-cofactor binding pocket%3B~organism:Lactobacillus plantarum JDM1%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1151 SN35N_1152 SN35N_1152 argB argB 1192480 1193226 - acetylglutamate kinase N-acetyl-L-glutamate binding site [chemical binding]%3B~acetylglutamate kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1152 SN35N_1153 SN35N_1153 argJ argJ 1193242 1194450 - arginine biosynthesis bifunctional protein ArgJ active site pocket [active]%3B~arginine biosynthesis bifunctional protein ArgJ [Lactobacillus plantarum ZJ316]%3B~heterotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1153 SN35N_1154 SN35N_1154 argC2 argC2 1194481 1195506 - N-acetyl-gamma-glutamyl-phosphate reductase N-acetyl-gamma-glutamyl-phosphate reductase [Lactobacillus plantarum WCFS1]%3B~N-acetyl-gamma-glutamyl-phosphate reductase%2C common form%3B TIGR01850%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~semialdehyde dehydrogenase%2C NAD binding domain%3B smart00859 gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1154 SN35N_1155 SN35N_1155 carA carA 1195775 1196842 + carbamoyl phosphate synthase small subunit carbamoyl phosphate synthase small subunit [Lactobacillus plantarum subsp. plantarum ST-III]%3B~carbamoyl phosphate synthase small subunit%3B reviewed%3B~carbamoyl-phosphate synthase small chain%2C CPSase domain%3B pfam00988%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~small chain of the glutamine-dependent form of carbamoyl phosphate synthase%2C CPSase II%3B cd01744%3B~subunit interface [polypeptide binding] gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1155 SN35N_1156 SN35N_1156 carB carB 1196835 1199897 + carbamoyl-phosphate synthase%2C large subunit ATP-grasp domain%3B cl17255%3B~carbamoyl phosphate synthase large subunit%3B reviewed%3B PRK12815%3B~carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B pfam02786%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~carbamoyl-phosphate synthase%2C large subunit [Lactobacillus plantarum subsp. plantarum ST-III]%3B~carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B pfam02787%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1156 SN35N_1157 SN35N_1157 ssuB ssuB 1200044 1200814 - aliphatic sulfonates import ATP-binding protein ssuB ABC transporter signature motif%3B~ABC-type nitrate/sulfonate/bicarbonate transport system%2C ATPase component [inorganic ion transport and metabolism]%3B COG1116%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the nitrate and sulfonate transporters%3B cd03293%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~aliphatic sulfonates import ATP-binding protein ssuB [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1157 SN35N_1158 SN35N_1158 SN35N_1158 1200830 1201843 - Abc2 ABC-ATPase subunit interface%3B~ABC-type nitrate/sulfonate/bicarbonate transport system%2C permease component [inorganic ion transport and metabolism]%3B COG0600%3B~Abc2 [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative PBP binding loops gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1158 SN35N_1159 SN35N_1159 SN35N_1159 1201864 1202916 - Abc1 Abc1 [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~NMT1/THI5 like%3B pfam09084%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding] gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1159 SN35N_1160 SN35N_1160 kup1 kup1 1203612 1205591 - potassium uptake protein K+ potassium transporter%3B cl15781%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~potassium uptake protein [Lactobacillus plantarum JDM1] gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1160 SN35N_1161 SN35N_1161 SN35N_1161 1205883 1206275 - toxin-antitoxin system%2C toxin component DNA-binding protein%2C PemK/MazF family PemK-like protein%3B pfam02452%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~toxin-antitoxin system%2C toxin component DNA-binding protein%2C PemK/MazF family [Lactobacillus plantarum ZJ316] gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1161 SN35N_1162 SN35N_1162 alr alr 1206684 1207811 - alanine racemase alanine racemase [Lactobacillus plantarum ZJ316]%3B~alanine racemase%3B reviewed%3B PRK00053%3B~catalytic residues [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate (PLP) binding site [chemical binding]%3B~substrate binding site [chemical binding]%3B~type III pyridoxal 5-phosphate (PLP)-dependent enzyme alanine Racemase%3B cd00430 gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1162 SN35N_1163 SN35N_1163 acpS acpS 1207811 1208173 - holo-[acyl-carrier-protein] synthase 4'-phosphopantetheinyl transferase%3B provisional%3B PRK00070%3B~holo-[acyl-carrier-protein] synthase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1163 SN35N_1164 SN35N_1164 SN35N_1164 1209286 1210872 - ATP-dependent RNA helicase-like protein ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent RNA helicase-like protein [Lactobacillus amylovorus GRL 1112]%3B~COG0513 superfamily II DNA and RNA helicases%3B~DEAD-like helicases superfamily%3B smart00487%3B~Mg++ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif III%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1164 SN35N_1165 SN35N_1165 murF murF 1211127 1212533 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Mur ligase family%2C catalytic domain%3B pfam01225%3B~Mur ligase middle domain%3B pfam08245%3B~UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [Lactobacillus plantarum ZJ316]%3B~UDP-N-acetylmuramyl pentapeptide synthase [cell envelope biogenesis%2C outer membrane]%3B COG0770%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1165 SN35N_1166 SN35N_1166 SN35N_1166 1212737 1213516 - hypothetical protein hypothetical protein zj316_0661 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1166 SN35N_1167 SN35N_1167 htpX htpX 1213586 1214485 - cell surface zinc metalloproteinase cell surface zinc metalloproteinase [Lactobacillus plantarum WCFS1]%3B~heat shock protein HtpX%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1167 SN35N_1168 SN35N_1168 SN35N_1168 1214497 1215057 - hypothetical protein hypothetical protein zj316_0659 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown]%3B COG1704 gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1168 SN35N_1169 SN35N_1169 srtA srtA 1215166 1215870 - sortase A catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sortase A [Lactobacillus plantarum ZJ316] gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1169 SN35N_1170 SN35N_1170 SN35N_1170 1216069 1217205 + hypothetical protein hypothetical protein zj316_0657 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1170 SN35N_1171 SN35N_1171 rpmE2 rpmE2 1217338 1217583 - 50S ribosomal protein L31 50S ribosomal protein L31 [Lactobacillus rhamnosus GG]%3B~50S ribosomal protein L31 type B%3B reviewed%3B PRK01678%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1171 SN35N_1172 SN35N_1172 SN35N_1172 1217710 1219002 - transcription termination factor rho ATP binding site [chemical binding]%3B~RNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~multimer interface [polypeptide binding]%3B~organism:Enterococcus casseliflavus EC20%3B~rho termination factor%2C N-terminal domain%3B cl06505%3B~transcription termination factor rho [Enterococcus casseliflavus EC20]%3B~transcription termination factor rho%3B provisional%3B PRK09376%3B~walker A motif%3B~walker B motif gene gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1172 SN35N_1173 SN35N_1173 SN35N_1173 1219032 1220312 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~UDP-N-acetylglucosamine 1-carboxyvinyltransferase%3B TIGR01072%3B~hinge%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1173 SN35N_1174 SN35N_1174 SN35N_1174 1220855 1221049 - hypothetical protein hypothetical protein zj316_0653 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1174 SN35N_1175 SN35N_1175 SN35N_1175 1221628 1222356 - hypothetical protein HTH domain%3B pfam13309%3B~YheO-like PAS domain%3B pfam08348%3B~hypothetical protein zj316_0652 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1175 SN35N_1176 SN35N_1176 SN35N_1176 1222508 1223410 - L-serine dehydratase L-serine deaminase [amino acid transport and metabolism]%3B COG1760%3B~L-serine dehydratase [Lactobacillus helveticus DPC 4571]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~serine dehydratase alpha chain%3B cl12120 gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1176 SN35N_1177 SN35N_1177 sdaAB sdaAB 1223426 1224079 - L-serine ammonia-lyase beta subunit L-serine ammonia-lyase beta subunit [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~serine dehydratase beta chain%3B pfam03315 gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1177 SN35N_1178 SN35N_1178 sdaC sdaC 1224449 1225729 - serine transporter amino acid permeases [amino acid transport and metabolism]%3B COG0814%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~serine transporter [Lactobacillus plantarum ZJ316]%3B~threonine/serine transporter TdcC%3B provisional%3B cl17672 gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1178 SN35N_1179 SN35N_1179 SN35N_1179 1226081 1227352 - seryl-tRNA synthetase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecalis T8%3B~seryl-tRNA synthetase N-terminal domain%3B pfam02403%3B~seryl-tRNA synthetase [Enterococcus faecalis T8]%3B~seryl-tRNA synthetase%3B provisional gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1179 SN35N_1180 SN35N_1180 SN35N_1180 1227819 1229432 - CTP synthase CTP synthase [Enterococcus casseliflavus EC20]%3B~CTP synthetase%3B validated%3B PRK05380%3B~UTP binding site [chemical binding]%3B~catalytic site [active]%3B~catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~putative oxyanion hole%3B~type 1 glutamine amidotransferase (GATase1) domain found in cytidine triphosphate synthetase%3B cd01746 gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1180 SN35N_1181 SN35N_1181 rpoE rpoE 1229605 1230213 - DNA-directed RNA polymerase subunit delta DNA-directed RNA polymerase delta subunit%3B pfam05066%3B~DNA-directed RNA polymerase subunit delta [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1181 SN35N_1182 SN35N_1182 SN35N_1182 1230258 1230698 - hypothetical protein domain of unknown function (DUF1934)%3B pfam09148%3B~hypothetical protein zj316_0644 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1182 SN35N_1183 SN35N_1183 SN35N_1183 1231184 1231993 + lipoate-protein ligase A identified by MetaGeneAnnotator%3B putative%3B~lipoate-protein ligase A [Lactobacillus plantarum 16]%3B~lipoate-protein ligase A [coenzyme metabolism]%3B COG0095%3B~organism:Lactobacillus plantarum 16 gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1183 SN35N_1184 SN35N_1184 SN35N_1184 1232008 1233360 + hydrolase HD superfamily phosphohydrolases [general function prediction only]%3B~Mg2+ binding site [ion binding]%3B~Zn2+ binding site [ion binding]%3B~hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1184 SN35N_1185 SN35N_1185 SN35N_1185 1233380 1234189 + hydrolase%2C HAD superfamily%2C Cof family hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sugar phosphate phosphatase%3B provisional gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1185 SN35N_1186 SN35N_1186 SN35N_1186 1234359 1235345 - lipoprotein precursor identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1186 SN35N_1187 SN35N_1187 SN35N_1187 1235428 1236450 - hypothetical membrane protein hypothetical membrane protein%2C DUF218 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active] gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1187 SN35N_1188 SN35N_1188 prsA prsA 1236739 1237719 - ribose-phosphate pyrophosphokinase N-terminal domain of ribose phosphate pyrophosphokinase%3B pfam13793%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~ribose-phosphate pyrophosphokinase [Lactobacillus rhamnosus GG]%3B~ribose-phosphate pyrophosphokinase%3B provisional gene gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1188 SN35N_1189 SN35N_1189 bla1 bla1 1238085 1238909 - beta-lactamase beta-lactamase [Lactobacillus plantarum JDM1]%3B~beta-lactamase enzyme family%3B pfam13354%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1189 SN35N_1190 SN35N_1190 glmU glmU 1239145 1240527 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase CoA binding site [chemical binding]%3B~Mg++ binding site%3B~N-terminal domain of bacterial GlmU%3B cd02540%3B~bifunctional N-acetylglucosamine-1-phosphate uridyl transferase/glucosamine-1-phosphate acetyltransferase [Lactobacillus plantarum JDM1]%3B~bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase%3B provisional%3B PRK14354%3B~forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~substrate binding site%3B~substrate binding site [chemical binding] gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1190 SN35N_1191 SN35N_1191 purR purR 1240596 1241432 - purine operon repressor bacterial purine repressor%2C N-terminal%3B pfam09182%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~pur operon repressor%3B provisional%3B~purine operon repressor [Lactobacillus plantarum subsp. plantarum P-8] gene gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1191 SN35N_1192 SN35N_1192 znuB znuB 1241788 1242591 - zinc/iron ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~ABC-type Mn2+/Zn2+ transport systems%2C permease components [inorganic ion transport and metabolism]%3B COG1108%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative PBP binding regions%3B~zinc/iron ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316] gene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1192 SN35N_1193 SN35N_1193 znuC znuC 1242578 1243276 - zinc/iron ABC transporter%2C ATP-binding protein ABC-type Mn/Zn transport systems%2C ATPase component [inorganic ion transport and metabolism]%3B COG1121%3B~ATP-binding cassette domain of the metal-type transporters%3B cd03235%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc/iron ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316] gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1193 SN35N_1194 SN35N_1194 SN35N_1194 1243545 1244489 - family S9 peptidase alpha/beta hydrolase family%3B pfam12697%3B~family S9 peptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prolyl oligopeptidase family%3B pfam00326 gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1194 SN35N_1195 SN35N_1195 ipk ipk 1244799 1245665 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Lactobacillus rhamnosus GG]%3B~4-diphosphocytidyl-2-C-methyl-D-erythritol kinase%3B provisional%3B PRK00128%3B~An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis%3B~GHMP kinases C terminal%3B pfam08544%3B~GHMP kinases N terminal domain%3B pfam00288%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1195 SN35N_1196 SN35N_1196 veg veg 1245798 1246049 - Veg protein Veg protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1021)%3B pfam06257 gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1196 SN35N_1197 SN35N_1197 ksgA ksgA 1246154 1247041 - dimethyladenosine transferase 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein%3B reviewed%3B PRK00274%3B~S-adenosylmethionine binding site [chemical binding]%3B~dimethyladenosine transferase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1197 SN35N_1198 SN35N_1198 SN35N_1198 1247041 1247580 - ribonuclease M5 domain of unknown function (DUF4093)%3B pfam13331%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative active site [active]%3B~putative metal binding site [ion binding]%3B~ribonuclease M5 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~ribonuclease M5%3B TIGR00334 gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1198 SN35N_1199 SN35N_1199 SN35N_1199 1247591 1248367 - DNase%2C TatD family DNase%2C TatD family [Lactobacillus plantarum ZJ316]%3B~TatD like proteins%3B E.coli TatD is a cytoplasmic protein%2C shown to have magnesium dependent DNase activity%3B cd01310%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1199 SN35N_1200 SN35N_1200 SN35N_1200 1248490 1249674 - drug resistance transporter drug resistance transporter [Lactobacillus plantarum subsp. plantarum ST-III]%3B~drug resistance transporter%2C Bcr/CflA subfamily%3B TIGR00710%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1200 SN35N_1201 SN35N_1201 SN35N_1201 1249907 1251958 - methionyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~anticodon binding site%3B~anticodon-binding domain of methionyl tRNA synthetases%3B cd07957%3B~catalytic core domain of methioninyl-tRNA synthetases%3B cd00814%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]%3B~methionyl-tRNA synthetase%3B reviewed%3B~organism:Enterococcus casseliflavus EC20%3B~putative tRNA-binding site [nucleotide binding]%3B~tRNA binding surface [nucleotide binding] gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1201 SN35N_1202 SN35N_1202 SN35N_1202 1252126 1252317 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1202 SN35N_1203 SN35N_1203 SN35N_1203 1252280 1252669 - phosphohydrolase identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum 16%3B~phosphohydrolase [Lactobacillus plantarum 16] gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1203 SN35N_1204 SN35N_1204 SN35N_1204 1253264 1254106 - hypothetical protein hypothetical protein zj316_0613 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function DUF72%3B pfam01904 gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1204 SN35N_1205 SN35N_1205 SN35N_1205 1254106 1254810 - NAD-dependent deacetylase NAD+ binding site [chemical binding]%3B~NAD-dependent deacetylase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~NAD-dependent deacetylase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative Zn binding site [ion binding]%3B~substrate binding site [chemical binding] gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1205 SN35N_1206 SN35N_1206 SN35N_1206 1254832 1255791 - hypothetical protein hypothetical protein zj316_0611 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1206 SN35N_1207 SN35N_1207 mvaA mvaA 1255784 1257058 - hydroxymethylglutaryl-CoA reductase NAD binding site [chemical binding]%3B~catalytic residues [active]%3B~class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)%3B cd00644%3B~flexible flap%3B~homodimer interface [polypeptide binding]%3B~hydroxymethylglutaryl-CoA reductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding] gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1207 SN35N_1208 SN35N_1208 ppx1 ppx1 1257104 1257961 - exopolyphosphatase Ppx/GppA phosphatase family%3B pfam02541%3B~exopolyphosphatase [Lactobacillus plantarum ZJ316]%3B~exopolyphosphatase%3B TIGR03706%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1208 SN35N_1209 SN35N_1209 dus1 dus1 1258463 1259476 - tRNA-dihydrouridine synthase FMN binding site [chemical binding]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tRNA-dihydrouridine synthase [Lactobacillus plantarum ZJ316]%3B~tRNA-dihydrouridine synthase [translation%2C ribosomal structure and biogenesis] gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1209 SN35N_1210 SN35N_1210 SN35N_1210 1259589 1260335 - transcription regulator helix-turn-helix domain%2C rpiR family%3B pfam01418%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative active site [active]%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulators [transcription]%3B COG1737 gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1210 SN35N_1211 SN35N_1211 SN35N_1211 1260485 1261381 - sugar kinase and transcription regulator identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cl17037%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sugar kinase and transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]%3B COG1940 gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1211 SN35N_1212 SN35N_1212 pbg1 pbg1 1261462 1262898 - 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus plantarum ZJ316]%3B~beta-galactosidase%3B TIGR03356%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1212 SN35N_1213 SN35N_1213 pts8C pts8C 1262916 1264274 - cellobiose PTS%2C EIIC cellobiose PTS%2C EIIC [Lactobacillus plantarum JDM1]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1213 SN35N_1214 SN35N_1214 SN35N_1214 1264494 1264916 - hypothetical protein domain of unknown function (DUF3284)%3B pfam11687%3B~hypothetical protein zj316_0603 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1214 SN35N_1215 SN35N_1215 SN35N_1215 1264906 1265094 - hypothetical protein N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins%2C a family of chloride ion channels%3B cl12141%3B~hypothetical protein zj316_0602 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1215 SN35N_1216 SN35N_1216 celC celC 1265101 1266462 - PTS system cellobiose-specific transporter subunit IIC PTS system cellobiose-specific transporter subunit IIC [Lactobacillus rhamnosus GG]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1216 SN35N_1217 SN35N_1217 SN35N_1217 1266535 1267245 - transcription regulator DNA-binding site [nucleotide binding]%3B~UTRA domain%3B pfam07702%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1217 SN35N_1218 SN35N_1218 SN35N_1218 1267651 1268667 - tryptophanyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~catalytic core domain of tryptophanyl-tRNA synthetase%3B cd00806%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~tryptophanyl-tRNA synthetase II%3B reviewed%3B~tryptophanyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1218 SN35N_1219 SN35N_1219 SN35N_1219 1269106 1269882 - carbon-nitrogen hydrolase family protein carbon-nitrogen hydrolase family protein [Lactobacillus plantarum 16]%3B~catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~predicted amidohydrolase [general function prediction only]%3B~putative active site [active]%3B~putative dimer interface [polypeptide binding]%3B~uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)%3B cd07583 gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1219 SN35N_1220 SN35N_1220 SN35N_1220 1270141 1272450 + DNA helicase DNA helicase [Lactobacillus plantarum 16]%3B~family description%3B pfam13538%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~part of AAA domain%3B pfam13245%3B~superfamily I DNA and RNA helicases [general function prediction only] gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1220 SN35N_1221 SN35N_1221 SN35N_1221 1272545 1272748 - putative peptide identified by MetaGeneAnnotator%3B putative%3B~orfZ1%3B~organism:Lactobacillus plantarum ZJ316%3B~putative peptide [Lactobacillus plantarum ZJ316] gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1221 SN35N_1222 SN35N_1222 plnW plnW 1272886 1273572 - integral membrane protein PlnW CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein PlnW [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1222 SN35N_1223 SN35N_1223 plnV plnV 1273666 1274346 - integral membrane protein PlnV CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein PlnV [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1223 SN35N_1224 SN35N_1224 plnU plnU 1274433 1275101 - membrane protein PlnU CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein PlnU [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1224 SN35N_1225 SN35N_1225 plnT plnT 1275169 1275858 - integral membrane protein PlnT CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein PlnT [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1225 SN35N_1226 SN35N_1226 SN35N_1226 1275896 1276825 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1226 SN35N_1227 SN35N_1227 SN35N_1227 1276995 1278371 - bacteriocin ABC transporter%2C accessory factor PlnH HlyD family secretion protein%3B pfam13437%3B~bacteriocin ABC transporter%2C accessory factor PlnH [Lactobacillus plantarum 16]%3B~bacteriocin secretion accessory protein%3B TIGR01000%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1227 SN35N_1228 SN35N_1228 SN35N_1228 1278388 1280538 - bacteriocin ABC-transporter%2C ATP-binding and permease protein PlnG ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC-type bacteriocin transporter%3B TIGR01193%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~bacteriocin ABC-transporter%2C ATP-binding and permea se protein PlnG [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative active site [active]%3B~walker A/P-loop%3B~walker B gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1228 SN35N_1229 SN35N_1229 plnE plnE 1280804 1280974 + bacteriocin precursor peptide PlnE bacteriocin precursor peptide PlnE[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1229 SN35N_1230 SN35N_1230 plnF plnF 1280999 1281157 + bacteriocin precursor peptide PlnF bacteriocin precursor peptide PlnF [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1230 SN35N_1231 SN35N_1231 SN35N_1231 1281357 1281647 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1231 SN35N_1232 SN35N_1232 plnD plnD 1282323 1283066 - response regulator PlnD%2C repressor LytTr DNA-binding domain%3B pfam04397%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~response regulator PlnD%2C repressor [Lactobacillus plantarum JDM1]%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279 gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1232 SN35N_1233 SN35N_1233 plnB plnB 1283067 1284407 - histidine protein kinase PlnB%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~histidine protein kinase PlnB%3B sensor protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1233 SN35N_1234 SN35N_1234 UL4IF UL4IF 1284425 1284592 - putative peptide pheromone/induction peptide identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1234 SN35N_1235 SN35N_1235 plnL plnL 1285185 1285853 + immunity protein PlnL identified by MetaGeneAnnotator%3B putative%3B~immunity protein PlnL [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1235 SN35N_1236 SN35N_1236 SN35N_1236 1286436 1286657 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1236 SN35N_1237 SN35N_1237 SN35N_1237 1286784 1286963 - putative bacteriocin identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1237 SN35N_1238 SN35N_1238 SN35N_1238 1286979 1287152 - putative bacteriocin prepeptide identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1238 SN35N_1239 SN35N_1239 napA1 napA1 1287527 1288711 - Na(+)/H(+) antiporter Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B COG0475%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sodium/hydrogen exchanger family%3B pfam00999 gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1239 SN35N_1240 SN35N_1240 brnQ1 brnQ1 1288756 1290132 - branched-chain amino acid transport protein branched-chain amino acid transport protein [Lactobacillus plantarum JDM1]%3B~branched-chain amino acid transport protein%3B pfam05525%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1240 SN35N_1241 SN35N_1241 SN35N_1241 1290658 1291473 - hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B cl17202%3B~haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum ZJ316 gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1241 SN35N_1242 SN35N_1242 SN35N_1242 1291633 1292505 + AraC family transcriptional regulator AraC family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~cupin domain%3B pfam07883%3B~helix-turn-helix domain%3B pfam12833%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1242 SN35N_1243 SN35N_1243 SN35N_1243 1292576 1293367 + HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus plantarum JDM1]%3B~haloacid dehalogenase-like hydrolase%3B pfam08282%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1243 SN35N_1244 SN35N_1244 SN35N_1244 1293371 1294525 + transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1244 SN35N_1245 SN35N_1245 SN35N_1245 1294529 1295146 + galactoside O-acetyltransferase CoA binding site [chemical binding]%3B~KEGG: pin:Ping_1731 galactoside O-acetyltransferase%3B~galactoside O-acetyltransferase [Paenibacillus sp. JDR- 2]%3B~galactoside O-acetyltransferase%3B reviewed%3B PRK09527%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Paenibacillus sp. JDR-2%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1245 SN35N_1246 SN35N_1246 SN35N_1246 1295482 1295946 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1246 SN35N_1247 SN35N_1247 SN35N_1247 1296238 1296657 - hypothetical membrane protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum NC8 gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1247 SN35N_1248 SN35N_1248 SN35N_1248 1296786 1296941 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1248 SN35N_1249 SN35N_1249 SN35N_1249 1297201 1297476 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1249 SN35N_1250 SN35N_1250 SN35N_1250 1297868 1298059 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1250 SN35N_1251 SN35N_1251 SN35N_1251 1298509 1298895 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1251 SN35N_1252 SN35N_1252 SN35N_1252 1298913 1299035 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1252 SN35N_1253 SN35N_1253 SN35N_1253 1299277 1299480 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1253 SN35N_1254 SN35N_1254 SN35N_1254 1299597 1299860 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1254 SN35N_1255 SN35N_1255 SN35N_1255 1300952 1301272 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus MP-10 gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1255 SN35N_1256 SN35N_1256 SN35N_1256 1301488 1301880 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1256 SN35N_1257 SN35N_1257 SN35N_1257 1301924 1302088 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1257 SN35N_1258 SN35N_1258 SN35N_1258 1302275 1302520 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Drosophila mojavensis gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1258 SN35N_1259 SN35N_1259 SN35N_1259 1302659 1302937 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1259 SN35N_1260 SN35N_1260 SN35N_1260 1303055 1303585 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1260 SN35N_1261 SN35N_1261 SN35N_1261 1303601 1303948 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes FSL F2-208 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1261 SN35N_1262 SN35N_1262 SN35N_1262 1303933 1305438 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1262 SN35N_1263 SN35N_1263 SN35N_1263 1305440 1309123 - cell surface protein precursor cell surface protein precursor [Lactobacillus plantarum subsp. plantarum ST-III]%3B~cell-wall surface anchor repeat%3B pfam13461%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1263 SN35N_1264 SN35N_1264 SN35N_1264 1309710 1310429 - glycerol transporter Asn-Pro-Ala signature motifs%3B~amphipathic channel%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~glycerol transporter [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1264 SN35N_1265 SN35N_1265 SN35N_1265 1310447 1312276 - glycerol-3-phosphate dehydrogenase glycerol-3-phosphate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~glycerol-3-phosphate dehydrogenase [energy production and conversion]%3B COG0578%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1265 SN35N_1266 SN35N_1266 glpK glpK 1312291 1313808 - glycerol kinase Escherichia coli glycerol kinase-like proteins%3B belongs to the FGGY family of carbohydrate kinases%3B cd07786%3B~FBP binding site [chemical binding]%3B~MgATP binding site [chemical binding]%3B~N- and C-terminal domain interface [polypeptide binding]%3B~catalytic site [active]%3B~converts glycerol and ADP to glycerol-3-phosphate and ADP%3B~glycerol binding site [chemical binding]%3B~glycerol kinase [Lactobacillus plantarum JDM1]%3B~glycerol kinase%3B provisional%3B PRK00047%3B~homodimer interface [polypeptide binding]%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum JDM1%3B~protein IIAGlc interface [polypeptide binding] gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1266 SN35N_1267 SN35N_1267 SN35N_1267 1314274 1315605 - glutathione reductase glutathione reductase [Lactobacillus salivarius UCC 118]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes [energy production and conversion]%3B COG1249%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1267 SN35N_1268 SN35N_1268 SN35N_1268 1315683 1316654 - glycine betaine transporter ABC transporter signature motif%3B~ABC-type proline/glycine betaine transport systems%2C ATPase components [amino acid transport and metabolism]%3B COG1125%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~Q-loop/lid%3B~glycine betaine transporter [Lactobacillus salivari us UCC118]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~walker A/P-loop%3B~walker B gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1268 SN35N_1269 SN35N_1269 SN35N_1269 1316655 1318181 - glycine betaine transporter NMT1-like family%3B cl15260%3B~glycine betaine transporter [Lactobacillus salivari us UCC118]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~substrate binding domain of ABC-type glycine betaine transport system%3B pfam04069 gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1269 SN35N_1270 SN35N_1270 SN35N_1270 1318419 1318865 + ribonuclease H-like protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~ribonuclease H-like protein [Lactobacillus plantarum 16] gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1270 SN35N_1271 SN35N_1271 SN35N_1271 1319753 1320664 - short-chain dehydrogenase 17beta hydroxysteroid dehydrogenase-like%2C classical (c) SDRs%3B cd05374%3B~NADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~short chain dehydrogenase%3B validated%3B~short-chain dehydrogenase [Lactobacillus plantarum 16]%3B~steroid binding site gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1271 SN35N_1272 SN35N_1272 SN35N_1272 1320801 1321721 + purine nucleosidase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~purine nucleosidase [Lactobacillus plantarum WCFS1]%3B~tetramer interface [polypeptide binding] gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1272 SN35N_1273 SN35N_1273 accB3 accB3 1321887 1322444 - acetyl-CoA carboxylase%2C biotin carboxyl carrier protein acetyl-CoA carboxylase biotin carboxyl carrier protein subunit%3B validated%3B~acetyl-CoA carboxylase%2C biotin carboxyl carrier protein [Lactobacillus plantarum ZJ316]%3B~biotinylation site [posttranslational modification]%3B~carboxyltransferase (CT) interaction site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1273 SN35N_1274 SN35N_1274 SN35N_1274 1322548 1322868 - hypothetical protein hypothetical protein zj316_0550 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1274 SN35N_1275 SN35N_1275 SN35N_1275 1323022 1323492 - Rrf2 family transcriptional regulator Rrf2 family protein%3B TIGR00738%3B~Rrf2 family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulator%3B pfam02082 gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1275 SN35N_1276 SN35N_1276 SN35N_1276 1323602 1324798 + hypothetical protein hypothetical protein zj316_0548 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein (DUF2075)%3B pfam09848%3B~uncharacterized conserved protein [function unknown] gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1276 SN35N_1277 SN35N_1277 SN35N_1277 1324829 1325338 + phospholipid-binding protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphatidylethanolamine-binding protein domain present in bacteria and archaea%3B cd00865%3B~phospholipid-binding protein [Lactobacillus plantarum ZJ316]%3B~substrate binding site [chemical binding] gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1277 SN35N_1278 SN35N_1278 SN35N_1278 1325451 1325819 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~protein of unknown function (DUF1304)%3B pfam06993 gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1278 SN35N_1279 SN35N_1279 SN35N_1279 1326084 1327589 - multicopper oxidase cytochrome C oxidase subunit II%2C periplasmic domain%3B cl11412%3B~identified by MetaGeneAnnotator%3B putative%3B~multicopper oxidase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~multicopper oxidase%3B provisional%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1279 SN35N_1280 SN35N_1280 rpiA2 rpiA2 1327747 1328415 - ribose 5-phosphate epimerase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~ribose 5-phosphate epimerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1280 SN35N_1281 SN35N_1281 SN35N_1281 1328609 1329172 + extracellular zinc metalloproteinase extracellular zinc metalloproteinase%2C M10 family [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~zinc-dependent metalloprotease%2C MMP_like subfamily. this group contains matrix metalloproteinases (MMPs)%2C serralysins%2C and the astacin_like family of proteases%3B cd04268 gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1281 SN35N_1282 SN35N_1282 SN35N_1282 1329403 1329672 - integral membrane protein ATP-dependent protease Lon%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1282 SN35N_1283 SN35N_1283 hicD1 hicD1 1329775 1330734 - L-2-hydroxyisocaproate dehydrogenase L-2-hydroxyisocaproate dehydrogenase [Lactobacillus plantarum ZJ316]%3B~L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases%3B cd05291%3B~L-lactate dehydrogenase%3B TIGR01771%3B~NAD binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1283 SN35N_1284 SN35N_1284 SN35N_1284 1331230 1332546 + ammonium transporter ammonium transporter [Lactobacillus helveticus DPC 4571]%3B~ammonium transporter family%3B cl03012%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1284 SN35N_1285 SN35N_1285 SN35N_1285 1332876 1334321 - multidrug-efflux transporter%2C major facilitator superfamily%2C EmrB family identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~multidrug-efflux transporter%2C major facilitator sup erfamily%2C EmrB family [Lactobacillus plantarum WCFS1 ]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative substrate translocation pore gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1285 SN35N_1286 SN35N_1286 SN35N_1286 1334318 1334860 - transcription regulator%2C PadR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C PadR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator PadR-like family%3B cl17335 gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1286 SN35N_1287 SN35N_1287 SN35N_1287 1335087 1335359 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~type II secretion system protein F%3B TIGR02120 gene gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1287 SN35N_1288 SN35N_1288 tagH tagH 1335738 1336829 - teichoic acids export ATP-binding protein TagH ABC transporter signature motif%3B~ABC-type polysaccharide/polyol phosphate transport system%2C ATPase component [carbohydrate transport and metabolism / cell envelope biogenesis%2C outer membrane]%3B COG1134%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette component of polysaccharide transport system%3B cd03220%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~teichoic acids export ATP-binding protein TagH [Lactobacillus plantarum subsp. plantarum P-8]%3B~walker A/P-loop%3B~walker B gene gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1288 SN35N_1289 SN35N_1289 tagG tagG 1336842 1337657 - teichoic acid ABC transporter%2C permease protein ABC-2 type transporter%3B pfam01061%3B~ABC-type polysaccharide/polyol phosphate export systems%2C permease component [carbohydrate transport and metabolism / cell envelope biogenesis%2C outer membrane]%3B COG1682%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~teichoic acid ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1289 SN35N_1290 SN35N_1290 SN35N_1290 1338252 1339418 + hypothetical protein hypothetical protein zj316_0533 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1290 SN35N_1291 SN35N_1291 SN35N_1291 1339595 1340770 - diaminopimelate aminotransferase catalytic residue [active]%3B~diaminopimelate aminotransferase [Listeria monocytogenes]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~transaminase%3B reviewed gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1291 SN35N_1292 SN35N_1292 SN35N_1292 1340978 1341253 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1292 SN35N_1293 SN35N_1293 birA1 birA1 1341242 1342213 - biotin-(acetyl-CoA-carboxylase) ligase and biotin operon repressor bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor%3B provisional%3B~biotin operon repressor [transcription]%3B COG1654%3B~biotin protein ligase C terminal domain%3B pfam02237%3B~biotin-(acetyl-CoA-carboxylase) ligase and biotin operon repressor [Lactobacillus plantarum JDM1]%3B~biotin/lipoate A/B protein ligase family%3B pfam03099%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1293 SN35N_1294 SN35N_1294 SN35N_1294 1342251 1342814 - biotin transporter BioY family%3B pfam02632%3B~biotin transporter [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1294 SN35N_1295 SN35N_1295 SN35N_1295 1342943 1343188 - hypothetical protein hypothetical protein zj316_0528 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1295 SN35N_1296 SN35N_1296 pepD2 pepD2 1343254 1344666 - dipeptidase dipeptidase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~peptidase family C69%3B pfam03577 gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1296 SN35N_1297 SN35N_1297 SN35N_1297 1344798 1345328 + transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~winged helix-turn helix%3B pfam13551 gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1297 SN35N_1298 SN35N_1298 SN35N_1298 1345325 1346212 + transposase HTH-like domain%3B pfam13276%3B~OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13333%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1298 SN35N_1299 SN35N_1299 SN35N_1299 1346369 1346503 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1299 SN35N_1300 SN35N_1300 SN35N_1300 1346843 1347043 + hypothetical protein hypothetical protein zj316_0526 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1300 SN35N_1301 SN35N_1301 SN35N_1301 1347056 1347958 + membrane protein HflK protein%3B TIGR01933%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1301 SN35N_1302 SN35N_1302 xylP1 xylP1 1348128 1349444 + carbohydrate (isoprimoverose like)/proton symporter%2C GPH family carbohydrate (isoprimoverose like)/proton symporter%2C GPH family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~melibiose:sodium symporter%3B provisional%3B cl15392%3B~organism:Lactobacillus plantarum ZJ316%3B~sugar (Glycoside-pentoside-Hexuronide) transporter%3B TIGR00792 gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1302 SN35N_1303 SN35N_1303 SN35N_1303 1349737 1350600 - fructose-bisphosphate aldolase Na+ binding site [ion binding]%3B~fructose-bisphosphate aldolase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~intersubunit interface [polypeptide binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~zinc binding site [ion binding] gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1303 SN35N_1304 SN35N_1304 acdH acdH 1351026 1352393 + acetaldehyde dehydrogenase acetaldehyde dehydrogenase [Lactobacillus plantarum JDM1]%3B~coenzyme A acylating aldehyde dehydrogenase (ACDH)%2C ALDH family 20-like%3B cd07122%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative catalytic cysteine [active] gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1304 SN35N_1305 SN35N_1305 SN35N_1305 1352499 1353512 - acetoin ABC transporter%2C permease protein acetoin ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1305 SN35N_1306 SN35N_1306 SN35N_1306 1353525 1354418 - ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC-type Na+ transport system%2C ATPase component [energy production and conversion / inorganic ion transport and metabolism]%3B COG4555%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1306 SN35N_1307 SN35N_1307 SN35N_1307 1354418 1354771 - acetoin transport repressor%2C GntR family DNA-binding site [nucleotide binding]%3B~acetoin transport repressor%2C GntR family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1307 SN35N_1308 SN35N_1308 SN35N_1308 1355032 1355217 - hypothetical protein hypothetical protein zj316_0518 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug efflux system subunit MdtB%3B provisional%3B~organism:Lactobacillus plantarum ZJ316 gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1308 SN35N_1309 SN35N_1309 SN35N_1309 1355311 1355838 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~acetyltransferases [general function prediction only]%3B COG0456%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1309 SN35N_1310 SN35N_1310 SN35N_1310 1355842 1356327 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1310 SN35N_1311 SN35N_1311 SN35N_1311 1356513 1356980 + hypothetical protein hypothetical protein zj316_0515 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1311 SN35N_1312 SN35N_1312 SN35N_1312 1357321 1357863 + cro/CI family transcriptional regulator cro/CI family transcriptional regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~cupin domain%3B pfam07883%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1312 SN35N_1313 SN35N_1313 SN35N_1313 1357934 1359031 + ABC-type spermidine/putrescine transport system%2C ATPase component ABC transporter signature motif%3B~ABC-type spermidine/putrescine transport system%2C ATPase component [Lactobacillus gasseri ATCC 33323]%3B~ABC-type spermidine/putrescine transport systems%2C ATPase components [amino acid transport and metabolism]%3B COG3842%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~TOBE domain%3B cl01440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~walker A/P-loop%3B~walker B gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1313 SN35N_1314 SN35N_1314 SN35N_1314 1359043 1359876 + spermidine/putrescine ABC transporter permease ABC-ATPase subunit interface%3B~ABC-type spermidine/putrescine transport system%2C permease component II [amino acid transport and metabolism]%3B COG1177%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~putative PBP binding loops%3B~spermidine/putrescine ABC transporter permease [Lactobacillus rhamnosus GG]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1314 SN35N_1315 SN35N_1315 SN35N_1315 1359876 1360691 + spermidine/purescine ABC transporter permease ABC-ATPase subunit interface%3B~ABC-type spermidine/putrescine transport system%2C permease component II [amino acid transport and metabolism]%3B COG1177%3B~conserved gate region%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative PBP binding loops%3B~spermidine/purescine ABC transporter permease [List eria monocytogenes] gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1315 SN35N_1316 SN35N_1316 SN35N_1316 1360688 1361758 + spermidine/putrescine-binding periplasmic protein Spermidine/putrescine-binding periplasmic protein [amino acid transport and metabolism]%3B COG0687%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~spermidine/putrescine-binding periplasmic protein [Lactobacillus gasseri ATCC 33323]%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398 gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1316 SN35N_1317 SN35N_1317 SN35N_1317 1361858 1362127 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1317 SN35N_1318 SN35N_1318 ndh1 ndh1 1362322 1363524 - NADH dehydrogenase NADH dehydrogenase [Lactobacillus plantarum WCFS1]%3B~NADH dehydrogenase%2C FAD-containing subunit [energy production and conversion]%3B COG1252%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1318 SN35N_1319 SN35N_1319 SN35N_1319 1363713 1364135 - transcription regulator%2C MarR family MarR family%3B pfam12802%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1319 SN35N_1320 SN35N_1320 SN35N_1320 1364209 1364652 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase[Lactobacillus plantarum JDM1]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1320 SN35N_1321 SN35N_1321 ack2 ack2 1364779 1365975 - acetate kinase acetate kinase A/propionate kinase 2%3B reviewed%3B~acetate kinase [Lactobacillus sakei subsp. sakei 23 K]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus sakei subsp. sakei 23K%3B~propionate/acetate kinase%3B provisional gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1321 SN35N_1322 SN35N_1322 SN35N_1322 1366161 1366526 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1322 SN35N_1323 SN35N_1323 SN35N_1323 1366946 1369315 + DNA helicase DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cl17251%3B~DEAD_2%3B pfam06733%3B~DNA helicase [Lactobacillus plantarum ZJ316]%3B~Rad3-related DNA helicases [transcription / DNA replication%2C recombination%2C and repair]%3B COG1199%3B~helicase C-terminal domain%3B pfam13307%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1323 SN35N_1324 SN35N_1324 SN35N_1324 1369315 1370031 + hypothetical protein hypothetical protein zj316_0502 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1324 SN35N_1325 SN35N_1325 SN35N_1325 1370028 1370945 + hypothetical protein hypothetical protein zj316_0501 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1325 SN35N_1326 SN35N_1326 gcsH1 gcsH1 1370955 1371329 + glycine cleavage system%2C H protein glycine cleavage system%2C H protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoyl attachment site [posttranslational modification]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1326 SN35N_1327 SN35N_1327 SN35N_1327 1371734 1372366 + extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1327 SN35N_1328 SN35N_1328 SN35N_1328 1373547 1373903 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2025 gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1328 SN35N_1329 SN35N_1329 SN35N_1329 1374016 1374222 + extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transglycosylase-like domain%3B pfam06737 gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1329 SN35N_1330 SN35N_1330 SN35N_1330 1374344 1375063 + CAAX family protease CAAX family protease [Lactobacillus plantarum subsp. plantarum P-8]%3B~CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1330 SN35N_1331 SN35N_1331 SN35N_1331 1375159 1375920 + CAAX family protease CAAX family protease [Lactobacillus plantarum subsp. plantarum P-8]%3B~CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1331 SN35N_1332 SN35N_1332 SN35N_1332 1376049 1376708 - ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide%2C and cell division protein%3B cd03255%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1332 SN35N_1333 SN35N_1333 SN35N_1333 1376720 1378198 - ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~ABC-type antimicrobial peptide transport system%2C permease component [defense mechanisms]%3B COG0577%3B~FtsX-like permease family%3B pfam02687%3B~MacB-like periplasmic core domain%3B pfam12704%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1333 SN35N_1334 SN35N_1334 SN35N_1334 1378521 1380578 - extracellular protein%2C CscC family carbohydrate binding site [chemical binding]%3B~extracellular protein%2C CscC family [Lactobacillus plantarum 16]%3B~homotetramer interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~legume lectins%3B cl14058%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum 16 gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1334 SN35N_1335 SN35N_1335 tag1 tag1 1380819 1381382 - DNA-3-methyladenine glycosylase I DNA-3-methyladenine glycosylase I [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyladenine glycosylase%3B pfam03352%3B~organism:Lactobacillus plantarum JDM1 gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1335 SN35N_1336 SN35N_1336 SN35N_1336 1381562 1385464 - transport protein%2C MMPL family cation efflux family%3B cl00316%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted drug exporters of the RND superfamily [general function prediction only]%3B~transport protein%2C MMPL family [Lactobacillus plantarum ZJ316] gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1336 SN35N_1337 SN35N_1337 SN35N_1337 1385645 1386217 + transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~probable dihydroxyacetone kinase regulator%3B TIGR02366%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulator C-terminal region%3B pfam14278 gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1337 SN35N_1338 SN35N_1338 SN35N_1338 1386473 1387165 - GTP pyrophosphokinase GTP pyrophosphokinase [Lactobacillus plantarum ZJ316]%3B~NTP binding site [chemical binding]%3B~guanosine polyphosphate pyrophosphohydrolases/synthetases [signal transduction mechanisms / transcription]%3B COG0317%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases%3B cd05399%3B~organism:Lactobacillus plantarum ZJ316%3B~synthetase active site [active] gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1338 SN35N_1339 SN35N_1339 SN35N_1339 1387210 1387497 - hypothetical protein hypothetical protein zj316_0488 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1339 SN35N_1340 SN35N_1340 glcD glcD 1387662 1389056 - glycolate dehydrogenase%2C subunit GlcD FAD binding domain%3B pfam01565%3B~glycolate dehydrogenase%2C subunit GlcD%2CFAD-binding [Lactobacillus plantarum WCFS1]%3B~glycolate oxidase%2C subunit GlcD%3B TIGR00387%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1340 SN35N_1341 SN35N_1341 SN35N_1341 1389329 1390399 + transcription regulator cell envelope-related transcriptional attenuator domain%3B cl00581%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1341 SN35N_1342 SN35N_1342 SN35N_1342 1390514 1390768 - hypothetical protein hypothetical protein zj316_0485 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1342 SN35N_1343 SN35N_1343 SN35N_1343 1390997 1391308 + hypothetical protein hypothetical protein zj316_0484 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1343 SN35N_1344 SN35N_1344 pts6C pts6C 1391461 1392786 - PTS system%2C cellobiose-specific EIIC component PTS system%2C cellobiose-specific EIIC component [Lactobacillus plantarum ZJ316]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1344 SN35N_1345 SN35N_1345 SN35N_1345 1393088 1393819 - transcription regulator%2C RpiR family helix-turn-helix domain%2C rpiR family%3B pfam01418%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active]%3B~transcription regulator%2C RpiR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1737 gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1345 SN35N_1346 SN35N_1346 SN35N_1346 1393900 1394187 - hypothetical protein hypothetical protein zj316_0481 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1346 SN35N_1347 SN35N_1347 rrp2 rrp2 1394353 1395057 + two-component system response regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~two-component system response regulator [Lactobacillus plantarum WCFS1] gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1347 SN35N_1348 SN35N_1348 hpk2 hpk2 1395044 1396420 + two-component system histidine protein kinase%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~signal transduction histidine kinase [signal transduction mechanisms]%3B COG0642%3B~two-component system histidine protein kinase%3B sens or protein [Lactobacillus plantarum ZJ316] gene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1348 SN35N_1349 SN35N_1349 SN35N_1349 1396572 1396964 - transcription regulator DNA binding residues [nucleotide binding]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1349 SN35N_1350 SN35N_1350 SN35N_1350 1397056 1398456 + transport protein%2C major facilitator superfamily drug resistance transporter%2C EmrB/QacA subfamily%3B TIGR00711%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316] gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1350 SN35N_1351 SN35N_1351 SN35N_1351 1398757 1399008 + hypothetical protein hypothetical protein zj316_0476 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1351 SN35N_1352 SN35N_1352 SN35N_1352 1399049 1399354 + extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1352 SN35N_1353 SN35N_1353 SN35N_1353 1399410 1400057 + hypothetical protein hypothetical protein zj316_0474 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1353 SN35N_1354 SN35N_1354 mntH mntH 1400189 1401583 - divalent metal cation transporter MntH Divalent metal cation transporter MntH [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~manganese transport protein MntH%3B reviewed%3B~natural resistance-associated macrophage protein%3B pfam01566%3B~organism:Lactobacillus plantarum ZJ316 gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1354 SN35N_1355 SN35N_1355 SN35N_1355 1401754 1402443 - transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator[Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1355 SN35N_1356 SN35N_1356 SN35N_1356 1402628 1403068 + transcription regulator%2C Rrf2 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulator [transcription]%3B~transcription regulator%2C Rrf2 family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator%3B pfam02082 gene gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1356 SN35N_1357 SN35N_1357 SN35N_1357 1403359 1403769 - aromatic acid carboxylyase%2C subunit D aromatic acid carboxylyase%2C subunit D [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1357 SN35N_1358 SN35N_1358 vdcB vdcB 1403772 1404335 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Lactobacillus plantarum subsp. plantarum P-8]%3B~3-polyprenyl-4-hydroxybenzoate decarboxylase [coenzyme metabolism]%3B COG0163%3B~flavoprotein%3B pfam02441%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1358 SN35N_1359 SN35N_1359 SN35N_1359 1404380 1404568 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1359 SN35N_1360 SN35N_1360 SN35N_1360 1404731 1406479 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus MP-10 gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1360 SN35N_1361 SN35N_1361 tagF2 tagF2 1406786 1409617 - teichoic acid biosynthesis protein CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase%3B pfam04464%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative ADP-binding pocket [chemical binding]%3B~putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [cell envelope biogenesis%2C outer membrane]%3B COG1887%3B~teichoic acid biosynthesis protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1361 SN35N_1362 SN35N_1362 tagF1 tagF1 1409658 1410866 - teichoic acid biosynthesis protein CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase%3B pfam04464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [cell envelope biogenesis%2C outer membrane]%3B COG1887%3B~teichoic acid biosynthesis protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1362 SN35N_1363 SN35N_1363 tagD1 tagD1 1410891 1411295 - glycerol-3-phosphate cytidylyltransferase HIGH motif%3B~KMSKS motif%3B~cytidylyltransferase%3B pfam01467%3B~glycerol-3-phosphate cytidylyltransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nucleotidyl transferase superfamily%3B cl00015%3B~organism:Lactobacillus plantarum ZJ316 gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1363 SN35N_1364 SN35N_1364 SN35N_1364 1411668 1412450 + hypothetical protein hypothetical protein zj316_0465 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1364 SN35N_1365 SN35N_1365 SN35N_1365 1412492 1414453 - beta-glucosides PTS%2C EIIABC HPr interaction site%3B~PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~beta-glucosides PTS%2C EIIABC [Lactobacillus plantarum subsp. plantarum ST-III]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1365 SN35N_1366 SN35N_1366 SN35N_1366 1414682 1416679 - beta-glucosides PTS%2C EIIABC HPr interaction site%3B~PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~beta-glucosides PTS%2C EIIABC [Lactobacillus plantarum subsp. plantarum ST-III]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1366 SN35N_1367 SN35N_1367 SN35N_1367 1416696 1418339 - alpha%2C alpha-phosphotrehalase Ca binding site [ion binding]%3B~alpha%2C alpha-phosphotrehalase [Lactobacillus gasseri ATCC 33323]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1367 SN35N_1368 SN35N_1368 treR treR 1418364 1419083 - GntR family transcriptional regulator DNA-binding site [nucleotide binding]%3B~GntR family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~UTRA domain%3B pfam07702%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~trehalose operon repressor%2C B. subtilis-type%3B TIGR02404%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1368 SN35N_1369 SN35N_1369 SN35N_1369 1419399 1419686 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1369 SN35N_1370 SN35N_1370 SN35N_1370 1419679 1419957 - hypothetical protein hypothetical protein zj316_0459 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2089)%3B pfam09862 gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1370 SN35N_1371 SN35N_1371 pnuC1 pnuC1 1420156 1420845 - nicotinamide mononucleotide transporter identified by MetaGeneAnnotator%3B putative%3B~nicotinamide mononucleotide transporter [Lactobacillus plantarum ZJ316]%3B~nicotinamide mononucleotide transporter%3B pfam04973%3B~organism:Lactobacillus plantarum ZJ316 gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1371 SN35N_1372 SN35N_1372 SN35N_1372 1421306 1422097 + methionine aminopeptidase identified by MetaGeneAnnotator%3B putative%3B~methionine aminopeptidase [Lactobacillus brevis ATCC 367]%3B~organism:Lactobacillus brevis ATCC 367 gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1372 SN35N_1373 SN35N_1373 SN35N_1373 1422265 1423194 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1373 SN35N_1374 SN35N_1374 SN35N_1374 1423757 1424668 + cysteine synthase catalytic residue [active]%3B~cysteine synthase [Lactobacillus helveticus DPC 4571]%3B~cysteine synthase [amino acid transport and metabolism]%3B COG0031%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1374 SN35N_1375 SN35N_1375 SN35N_1375 1424680 1425825 + cystathionine beta-lyase catalytic residue [active]%3B~cystathionine beta-lyase [Lactobacillus helveticus DPC 4571]%3B~cystathionine beta-lyase%3B provisional%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~substrate-cofactor binding pocket gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1375 SN35N_1376 SN35N_1376 SN35N_1376 1425830 1426372 + serine acetyltransferase CoA binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~serine O-acetyltransferase%3B TIGR01172%3B~serine acetyltransferase [Lactobacillus helveticus DPC 4571]%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1376 SN35N_1377 SN35N_1377 kdgK kdgK 1426536 1427558 - 2-keto-3-deoxygluconate kinase 2-keto-3-deoxygluconate kinase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ATP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~substrate binding site [chemical binding]%3B~sugar kinases%2C ribokinase family [carbohydrate transport and metabolism]%3B COG0524 gene gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1377 SN35N_1378 SN35N_1378 SN35N_1378 1427572 1428306 - 4-hydroxy-2-oxoglutarate aldolase 4-hydroxy-2-oxoglutarate aldolase [Enterococcus faecalis OG1RF]%3B~Pfam: PF07071%3B InterPro: IPR010763%3B~conserved hypothetical protein EF_0839/AHA_3917%3B TIGR03581%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecalis OG1RF gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1378 SN35N_1379 SN35N_1379 SN35N_1379 1428297 1429397 - L-seryl-tRNA(Sec) selenium transferase-related protein%2C pyridoxal phosphate-dependent L-seryl-tRNA selenium transferase%3B pfam03841%3B~L-seryl-tRNA(Sec) selenium transferase-related protein%2C pyridoxal phosphate-dependent [Lactobacillus plantarum WCFS1]%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyridoxal 5'-phosphate binding pocket [chemical binding]%3B~uncharacterized pyridoxal phosphate-dependent enzyme%3B TIGR01437 gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1379 SN35N_1380 SN35N_1380 SN35N_1380 1429467 1430585 - dihydroorotase dihydroorotase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~probable amidohydrolase EF_0837/AHA_3915%3B TIGR03583 gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1380 SN35N_1381 SN35N_1381 SN35N_1381 1430578 1431672 - PTS-associated protein PTS-associated protein [Lactobacillus plantarum WCFS1]%3B~bacterial protein of unknown function (DUF871)%3B pfam05913%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized conserved protein [function unknown] gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1381 SN35N_1382 SN35N_1382 SN35N_1382 1431669 1431935 - hypothetical protein hypothetical protein zj316_0447 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1382 SN35N_1383 SN35N_1383 pts3C pts3C 1431945 1433222 - PTS system%2C cellobiose-specific EIIC component PTS system%2C cellobiose-specific EIIC component [Lactobacillus plantarum WCFS1]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1383 SN35N_1384 SN35N_1384 SN35N_1384 1433800 1434495 - GntR family transcriptional regulator DNA-binding site [nucleotide binding]%3B~GntR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~UTRA domain%3B pfam07702%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1384 SN35N_1385 SN35N_1385 SN35N_1385 1434764 1435312 - NADPH-dependent FMN reductase NADPH-dependent FMN reductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted flavoprotein [general function prediction only] gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1385 SN35N_1386 SN35N_1386 SN35N_1386 1435612 1436958 - hypothetical protein hypothetical protein zj316_0443 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2252)%3B pfam10009%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1386 SN35N_1387 SN35N_1387 ndk ndk 1437193 1437657 + nucleoside-diphosphate kinase identified by MetaGeneAnnotator%3B putative%3B~multimer interface [polypeptide binding]%3B~nucleoside-diphosphate kinase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1387 SN35N_1388 SN35N_1388 SN35N_1388 1437899 1438300 + hypothetical protein hypothetical protein zj316_0441 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1388 SN35N_1389 SN35N_1389 SN35N_1389 1438365 1438919 - hypothetical protein hypothetical protein zj316_0440 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1389 SN35N_1390 SN35N_1390 trxA1 trxA1 1439630 1439962 - thioredoxin catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~thioredoxin [Lactobacillus plantarum ZJ316]%3B~thioredoxin-like%3B pfam13905 gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1390 SN35N_1391 SN35N_1391 SN35N_1391 1440143 1440694 + hypothetical protein DNA binding residues [nucleotide binding]%3B~helix-turn-helix DNA binding domain of transcription regulators from the MerR superfamily%3B cl02600%3B~hypothetical protein zj316_0437 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1391 SN35N_1392 SN35N_1392 mtlD mtlD 1440957 1442114 - mannitol-1-phosphate 5-dehydrogenase identified by MetaGeneAnnotator%3B putative%3B~mannitol dehydrogenase C-terminal domain%3B pfam08125%3B~mannitol dehydrogenase rossmann domain%3B pfam01232%3B~mannitol-1-phosphate 5-dehydrogenase [Lactobacillus rhamnosus GG]%3B~mannitol-1-phosphate 5-dehydrogenase%3B provisional%3B~organism:Lactobacillus rhamnosus GG gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1392 SN35N_1393 SN35N_1393 pts2A pts2A 1442116 1442565 - PTS system%2C mannitol-specific EIIA component PTS system%2C mannitol-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1393 SN35N_1394 SN35N_1394 SN35N_1394 1442580 1444655 - BglG family transcriptional regulator BglG family transcriptional regulator [Lactobacillus plantarum 16]%3B~P-loop%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phosphorylation site [posttranslational modification]%3B~transcriptional antiterminator [transcription]%3B COG3711 gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1394 SN35N_1395 SN35N_1395 SN35N_1395 1444692 1446530 - PTS system%2C mannitol-specific EIICB component P-loop%3B~PTS system%2C mannitol-specific EIICB component [Lactobacillus plantarum 16]%3B~PTS system%2C mannitol-specific IIC component%3B TIGR00851%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system%2C mannitol-specific IIBC component [carbohydrate transport and metabolism]%3B COG2213 gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1395 SN35N_1396 SN35N_1396 pepD1 pepD1 1446892 1448307 + dipeptidase dipeptidase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~peptidase family C69%3B pfam03577 gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1396 SN35N_1397 SN35N_1397 SN35N_1397 1448364 1448969 - AraC-type DNA-binding protein AraC-type DNA-binding protein [Lactobacillus plantarum ZJ316]%3B~bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~helix_turn_helix%2C arabinose operon control protein%3B smart00342%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1397 SN35N_1398 SN35N_1398 SN35N_1398 1449411 1450916 + fumarate reductase flavocytochrome c%3B TIGR01813%3B~fumarate reductase/succinate dehydrogenase flavoprotein domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted oxidoreductase [general function prediction only]%3B~putative FAD-binding dehydrogenase%3B reviewed gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1398 SN35N_1399 SN35N_1399 SN35N_1399 1450962 1452170 + transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316] gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1399 SN35N_1400 SN35N_1400 SN35N_1400 1452260 1452973 - glucosamine-6-phosphate deaminase active site lid [active]%3B~allosteric site%3B~glucosamine-6-phosphate deaminase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~trimer interface [polypeptide binding] gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1400 SN35N_1401 SN35N_1401 SN35N_1401 1453353 1453556 + transcription regulator%2C cro/CI family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C cro/CI family [Lactobacillus plantarum ZJ316] gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1401 SN35N_1402 SN35N_1402 SN35N_1402 1453569 1453982 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1402 SN35N_1403 SN35N_1403 greA greA 1454068 1454538 + transcription elongation factor GreA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription elongation factor GreA [Lactobacillus plantarum ZJ316]%3B~transcription elongation factor GreA%3B reviewed%3B PRK00226%3B~transcription elongation factor%2C GreA/GreB%2C C-term%3B pfam01272%3B~transcription elongation factor%2C N-terminal%3B pfam03449 gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1403 SN35N_1404 SN35N_1404 SN35N_1404 1455042 1455872 - 2%2C5 diketo-D-gluconic acid-like reductase 2%2C5 diketo-D-gluconic acid-like reductase [Lactobacillus plantarum ZJ316]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1404 SN35N_1405 SN35N_1405 gpo gpo 1455923 1456408 - glutathione peroxidase catalytic residues [active]%3B~dimer interface [polypeptide binding]%3B~glutathione peroxidase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1405 SN35N_1406 SN35N_1406 SN35N_1406 1456749 1457318 + ABC transporter ABC transporter [Lactobacillus plantarum JDM1]%3B~ABC-type cobalt transport system%2C permease component%3B pfam09819%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1406 SN35N_1407 SN35N_1407 SN35N_1407 1457348 1458754 + ABC transporter%2C ATP-binding protein AAA domain%3B pfam13476%3B~ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ABC transporter%3B pfam00005%3B~ABC-type cobalt transport system%2C ATPase component [inorganic ion transport and metabolism]%3B COG1122%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1407 SN35N_1408 SN35N_1408 SN35N_1408 1458751 1459410 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum WCFS1]%3B~ABC-type cobalt transport system%2C permease component CbiQ and related transporters [inorganic ion transport and metabolism]%3B COG0619%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1408 SN35N_1409 SN35N_1409 SN35N_1409 1459531 1461051 - ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC transporter%3B pfam12848%3B~ABC-type cobalt transport system%2C ATPase component [inorganic ion transport and metabolism]%3B COG1122%3B~ABC-type dipeptide/oligopeptide/nickel transport system%2C ATPase component [amino acid transport and metabolism / inorganic ion transport and metabolism]%3B COG1124%3B~ATP-binding cassette domain of elongation factor 3%2C subfamily F%3B cd03221%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1409 SN35N_1410 SN35N_1410 crcB2 crcB2 1461351 1461734 + protein CrcB-like protein 2 CrcB-like protein%3B cl09114%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein CrcB-like protein 2 [Lactobacillus plantarum ZJ316] gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1410 SN35N_1411 SN35N_1411 crcB1 crcB1 1461734 1462084 + protein CrcB-like protein 1 CrcB-like protein%3B cl09114%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein CrcB-like protein 1 [Lactobacillus plantarum ZJ316] gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1411 SN35N_1412 SN35N_1412 SN35N_1412 1462223 1462414 - hypothetical protein hypothetical protein zj316_0416 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1412 SN35N_1413 SN35N_1413 ack1 ack1 1462533 1463720 - acetate kinase acetate kinase A/propionate kinase 2%3B reviewed%3B~acetate kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~propionate/acetate kinase%3B provisional gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1413 SN35N_1414 SN35N_1414 SN35N_1414 1463896 1464768 + RNA-binding protein RNA-binding protein [Lactobacillus plantarum 16]%3B~domain of unknown function (DUF814)%3B pfam05670%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1414 SN35N_1415 SN35N_1415 SN35N_1415 1464755 1465105 + hypothetical protein domain of unknown function (DU1801)%3B cl17490%3B~hypothetical protein zj316_0412 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1415 SN35N_1416 SN35N_1416 SN35N_1416 1465108 1465329 - hypothetical protein hypothetical protein zj316_0411 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative heme-binding domain%2C Pirellula/Verrucomicrobium type%3B TIGR02603 gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1416 SN35N_1417 SN35N_1417 SN35N_1417 1465831 1466823 - aryl-alcohol dehydrogenase family enzyme aldo/keto reductase family%3B pfam00248%3B~aryl-alcohol dehydrogenase family enzyme [Lactobacillus plantarum ZJ316]%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1417 SN35N_1418 SN35N_1418 pgm1 pgm1 1467081 1467704 - phosphoglycerate mutase catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoglycerate mutase [Lactobacillus plantarum subsp. plantarum P-8] gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1418 SN35N_1419 SN35N_1419 SN35N_1419 1468088 1469161 + phosphoserine aminotransferase catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~phosphoserine aminotransferase [Lactobacillus helveticus DPC 4571]%3B~pyridoxal 5'-phosphate binding pocket [chemical binding] gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1419 SN35N_1420 SN35N_1420 SN35N_1420 1469177 1470355 + phosphoglycerate dehydrogenase ACT domain interface%3B~C-terminal ACT (regulatory) domain of D-3-phosphoglycerate dehydrogenase (3PGDH) found in fungi and bacteria%3B cd04901%3B~D-isomer specific 2-hydroxyacid dehydrogenase%2C catalytic domain%3B pfam00389%3B~L-serine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~phosphoglycerate dehydrogenase [Lactobacillus helveticus DPC 4571]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1420 SN35N_1421 SN35N_1421 SN35N_1421 1470352 1470795 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1421 SN35N_1422 SN35N_1422 SN35N_1422 1470948 1472609 + ABC transporter substrate-binding protein ABC transporter substrate-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC-type oligopeptide transport system%2C periplasmic component [amino acid transport and metabolism]%3B COG4166%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1422 SN35N_1423 SN35N_1423 SN35N_1423 1472815 1474476 + ABC transporter substrate-binding protein ABC transporter substrate-binding protein [Lactobacillus plantarum WCFS1]%3B~bacterial extracellular solute-binding proteins%2C family 5 middle%3B pfam00496%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1423 SN35N_1424 SN35N_1424 SN35N_1424 1474664 1475506 + transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1424 SN35N_1425 SN35N_1425 SN35N_1425 1475599 1475730 + hypothetical protein hypothetical protein zj316_0402 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1425 SN35N_1426 SN35N_1426 SN35N_1426 1475818 1476348 + transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~winged helix-turn helix%3B pfam13551 gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1426 SN35N_1427 SN35N_1427 SN35N_1427 1476345 1477232 + transposase HTH-like domain%3B pfam13276%3B~OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13333%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1427 SN35N_1428 SN35N_1428 SN35N_1428 1477291 1480365 - cell surface protein precursor%2C LPXTG-motif cell wall anchor Cna protein B-type domain%3B pfam05738%3B~cell surface protein precursor%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum 16]%3B~domain interaction interfaces [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~repeat unit of collagen-binding protein domain B%3B cd00222 gene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1428 SN35N_1429 SN35N_1429 SN35N_1429 1480491 1481414 + transposase%2C IS30 family COG: COG2826%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus reuteri I5007%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus reuteri I5007] gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1429 SN35N_1430 SN35N_1430 SN35N_1430 1482410 1483324 + LysR family transcriptional regulator LysR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcriptional regulator [transcription]%3B COG0583 gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1430 SN35N_1431 SN35N_1431 alg4 alg4 1483524 1485197 - oligo-1%2C6-glucosidase Ca binding site [ion binding]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~catalytic site [active]%3B~domain of unknown function (DUF3459)%3B pfam11941%3B~identified by MetaGeneAnnotator%3B putative%3B~oligo-1%2C6-glucosidase [Leuconostoc gasicomitatum LM G 18811]%3B~organism:Leuconostoc gasicomitatum LMG 18811 gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1431 SN35N_1432 SN35N_1432 SN35N_1432 1485743 1487143 + Na+/H+ antiporter COG1757 Na+/H+ antiporter%3B~Na+/H+ antiporter NhaC%3B TIGR00931%3B~Na+/H+ antiporter [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1432 SN35N_1433 SN35N_1433 SN35N_1433 1487364 1488278 + oxidoreductase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases%3B cd05289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1]%3B~putative NAD(P) binding site [chemical binding] gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1433 SN35N_1434 SN35N_1434 SN35N_1434 1488435 1490111 - raffinose-6-phosphate hydrolase %26 stachyose-6-phosphate hydrolase Ca binding site [ion binding]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~catalytic site [active]%3B~domain of unknown function (DUF3459)%3B pfam11941%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~raffinose-6-phosphate hydrolase %26 stachyose-6-phosp hate hydrolase [Lactobacillus plantarum WCFS1] gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1434 SN35N_1435 SN35N_1435 scrR scrR 1490132 1491112 - oligosucrose operon repressor DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus metalliredigens (strain Qymf) and its close homologs%3B cd06291%3B~ligand binding site [chemical binding]%3B~oligosucrose operon repressor [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~sodium binding site [ion binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1435 SN35N_1436 SN35N_1436 sacA sacA 1491093 1492598 - beta-fructofuranosidase beta-fructofuranosidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~glycosyl hydrolase family 32%2C beta-fructosidases%3B cd08996%3B~glycosyl hydrolases family 32 C terminal%3B pfam08244%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~substrate binding [chemical binding]%3B~sucrose-6-phosphate hydrolase%3B TIGR01322 gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1436 SN35N_1437 SN35N_1437 pts1BCA pts1BCA 1492854 1494809 + sucrose PTS%2C EIIBCA HPr interaction site%3B~PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263%3B~sucrose PTS%2C EIIBCA [Lactobacillus plantarum JDM1] gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1437 SN35N_1438 SN35N_1438 melA melA 1494829 1496988 + alpha-galactosidase alpha-galactosidase [Lactobacillus plantarum ZJ316]%3B~alpha-galactosidase [carbohydrate transport and metabolism]%3B COG3345%3B~identified by MetaGeneAnnotator%3B putative%3B~melibiase%3B pfam02065%3B~organism:Lactobacillus plantarum ZJ316 gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1438 SN35N_1439 SN35N_1439 sacK1 sacK1 1497068 1497934 + fructokinase fructokinase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cd00012%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cl17037%3B~organism:Lactobacillus plantarum ZJ316%3B~transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]%3B COG1940 gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1439 SN35N_1440 SN35N_1440 SN35N_1440 1498012 1498284 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~sugar efflux transporter for intercellular exchange%3B pfam03083 gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1440 SN35N_1441 SN35N_1441 SN35N_1441 1498871 1501717 + mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F5/8 type C domain%3B pfam00754%3B~coagulation factor 5/8 C-terminal domain%2C discoidin domain%3B smart00231%3B~endo-beta-N-acetylglucosaminidase D [carbohydrate transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~mannosyl-glycoprotein endo-beta-N-acetylglucosamini dase [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~putative active site [active]%3B~sugar binding site [chemical binding] gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1441 SN35N_1442 SN35N_1442 map2 map2 1501931 1504201 - maltose phosphorylase glycosyl hydrolase family 65 central catalytic domain%3B pfam03632%3B~glycosyl hydrolase family 65%2C C-terminal domain%3B pfam03633%3B~glycosyl hydrolase family 65%2C N-terminal domain%3B pfam03636%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose phosphorylase [Lactobacillus plantarum JDM1]%3B~maltose phosphorylase%3B provisional%3B~organism:Lactobacillus plantarum JDM1 gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1442 SN35N_1443 SN35N_1443 msmK2 msmK2 1504228 1505334 - sugar ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~TOBE domain%3B pfam03459%3B~glycerol-3-phosphate transporter ATP-binding subunit%3B provisional%3B PRK11650%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus crispatus ST1%3B~sugar ABC transporter%2C ATP-binding protein [Lactobacillus crispatus ST1]%3B~the N-terminal ATPase domain of the maltose transporter%2C MalK%3B cd03301%3B~walker A/P-loop%3B~walker B gene gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1443 SN35N_1444 SN35N_1444 amy2 amy2 1505436 1506758 - alpha-amylase alpha amylase catalytic domain found in archaeal and bacterial alpha-amylases (also called 1%2C4-alpha-D-glucan-4-glucanohydrolase)%3B cd11313%3B~alpha-amylase [Lactobacillus plantarum JDM1]%3B~catalytic site [active]%3B~glycosidases [carbohydrate transport and metabolism]%3B COG0366%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1444 SN35N_1445 SN35N_1445 malA malA 1506792 1507622 - maltose/maltodextrin ABC transporter subunit identified by MetaGeneAnnotator%3B putative%3B~maltose/maltodextrin ABC transporter subunit[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~predicted integral membrane protein [function unknown] gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1445 SN35N_1446 SN35N_1446 SN35N_1446 1507650 1508534 - sugar ABC transporter permease ABC-ATPase subunit interface%3B~ABC-type sugar transport system%2C permease component [carbohydrate transport and metabolism]%3B COG0395%3B~conserved gate region%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative PBP binding loops%3B~sugar ABC transporter permease [Listeria monocytogenes] gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1446 SN35N_1447 SN35N_1447 SN35N_1447 1508539 1509828 - sugar ABC transporter permease ABC-ATPase subunit interface%3B~conserved gate region%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative PBP binding loops%3B~sugar ABC transporter permease [Listeria monocytogenes] gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1447 SN35N_1448 SN35N_1448 malE malE 1509938 1511191 - maltose/maltodextrin ABC transporter%2C substrate binding protein bacterial extracellular solute-binding protein%3B pfam01547%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose-binding periplasmic proteins/domains [carbohydrate transport and metabolism]%3B COG2182%3B~maltose/maltodextrin ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1448 SN35N_1449 SN35N_1449 agl1 agl1 1511447 1513120 - alpha-glucosidase Ca binding site [ion binding]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~alpha-glucosidase [Lactobacillus plantarum JDM1]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1449 SN35N_1450 SN35N_1450 SN35N_1450 1513137 1514099 - transcription regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily%3B cd06267%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1450 SN35N_1451 SN35N_1451 SN35N_1451 1514123 1515142 - LacI family transcriptional regulator DNA binding site [nucleotide binding]%3B~LacI family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of uncharacterized transcription regulator ycjW which is a member of the LacI-GalR family repressors%3B cd06294%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1451 SN35N_1452 SN35N_1452 glpF glpF 1515293 1516000 - glycerol uptake facilitator protein Asn-Pro-Ala signature motifs%3B~amphipathic channel%3B~glycerol uptake facilitator and related permeases [carbohydrate transport and metabolism]%3B COG0580%3B~glycerol uptake facilitator protein [Lactobacillus salivarius CECT 5713]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius CECT 5713 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1452 SN35N_1453 SN35N_1453 dak3 dak3 1516015 1516383 - dihydroxyacetone phosphotransferase phosphoryl donor protein dihydroxyacetone phosphotransferase%2C phosphoryl donor protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphotransferase mannnose-specific family component IIA%3B provisional gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1453 SN35N_1454 SN35N_1454 SN35N_1454 1516380 1516961 - dihydroxyacetone kinase COG2376 dihydroxyacetone kinase%3B~DAK2 domain%3B cl03685%3B~dihydroxyacetone kinase [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1454 SN35N_1455 SN35N_1455 SN35N_1455 1516975 1517973 - dihydroxyacetone kinase subunit DhaK COG2376 dihydroxyacetone kinase%3B~dihydroxyacetone kinase [carbohydrate transport and metabolism]%3B COG2376%3B~dihydroxyacetone kinase subunit DhaK [Lactobacillus amylovorus GRL 1112]%3B~dihydroxyacetone kinase subunit DhaK%3B provisional%3B cl10557%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1455 SN35N_1456 SN35N_1456 dak1A dak1A 1518135 1519124 + glycerone kinase dihydroxyacetone kinase [carbohydrate transport and metabolism]%3B COG2376%3B~glycerone kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~probable dihydroxyacetone kinase DhaK1b subunit%3B TIGR02362 gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1456 SN35N_1457 SN35N_1457 SN35N_1457 1519121 1519639 - transcription regulator%2C TetR family bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~probable dihydroxyacetone kinase regulator%3B TIGR02366%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316] gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1457 SN35N_1458 SN35N_1458 SN35N_1458 1519870 1520382 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1458 SN35N_1459 SN35N_1459 SN35N_1459 1520555 1522096 - acyl-CoA dehydrogenase acyl-CoA dehydrogenase [Lactobacillus plantarum WCFS1]%3B~acyl-CoA dehydrogenase%3B cl09933%3B~acyl-CoA dehydrogenases [lipid metabolism]%3B COG1960%3B~electron transfer flavoprotein FAD-binding domain%3B pfam00766%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1459 SN35N_1460 SN35N_1460 SN35N_1460 1522264 1522926 - TetR family transcriptional regulator TetR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1460 SN35N_1461 SN35N_1461 SN35N_1461 1522945 1524561 - ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative exporter of polyketide antibiotics [cell envelope biogenesis%2C outer membrane]%3B COG3559 gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1461 SN35N_1462 SN35N_1462 SN35N_1462 1524567 1525484 - polyketide transporter ATPase component ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri%3B~polyketide transporter ATPase component [Lactobacillus reuteri]%3B~walker A/P-loop%3B~walker B gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1462 SN35N_1463 SN35N_1463 SN35N_1463 1525747 1526541 - short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [secondary metabolites biosynthesis%2C transport%2C and catabolism / general function prediction only]%3B COG1028%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316] gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1463 SN35N_1464 SN35N_1464 SN35N_1464 1526710 1527201 - hypothetical protein hypothetical protein zj316_0362 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1464 SN35N_1465 SN35N_1465 SN35N_1465 1527533 1528345 - hypothetical protein hypothetical protein zj316_0361 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1465 SN35N_1466 SN35N_1466 SN35N_1466 1528370 1529155 - hypothetical protein hypothetical protein zj316_0360 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1466 SN35N_1467 SN35N_1467 SN35N_1467 1529184 1529513 - transcription regulator%2C PadR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C PadR family [Lactobacillus plantarum ZJ316] gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1467 SN35N_1468 SN35N_1468 SN35N_1468 1529658 1530410 - transcription regulator DNA-binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~the UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain%3B smart00866%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1468 SN35N_1469 SN35N_1469 SN35N_1469 1530685 1530903 + hypothetical protein hypothetical protein zj316_0357 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1469 SN35N_1470 SN35N_1470 SN35N_1470 1530982 1531542 + UPF0397 protein UPF0397 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1470 SN35N_1471 SN35N_1471 SN35N_1471 1531547 1533247 + putative ABC transporter ATP-binding protein ABC transporter signature motif%3B~ABC-type cobalt transport system%2C ATPase component [inorganic ion transport and metabolism]%3B COG1122%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette cobalt transporter%3B pfam12558%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative ABC transporter ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~walker A/P-loop%3B~walker B gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1471 SN35N_1472 SN35N_1472 SN35N_1472 1533249 1534088 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~ABC-type cobalt transport system%2C permease component CbiQ and related transporters [inorganic ion transport and metabolism]%3B COG0619%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1472 SN35N_1473 SN35N_1473 SN35N_1473 1534339 1535448 + oxidoreductase NADH:flavin oxidoreductases%2C Old Yellow enzyme family [energy production and conversion]%3B COG1902%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative FMN binding site [chemical binding]%3B~putative active site [active]%3B~putative catalytic residue [active]%3B~putative substrate binding site [chemical binding] gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1473 SN35N_1474 SN35N_1474 SN35N_1474 1535517 1537034 - hypothetical protein hypothetical protein zj316_0352 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1474 SN35N_1475 SN35N_1475 SN35N_1475 1537301 1538113 + extracellular protein extracellular protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1475 SN35N_1476 SN35N_1476 lai lai 1538285 1539979 - linoleic acid isomerase identified by MetaGeneAnnotator%3B putative%3B~linoleic acid isomerase [Lactobacillus plantarum WCFS1]%3B~myosin-cross-reactive antigen%3B provisional%3B~organism:Lactobacillus plantarum WCFS1 gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1476 SN35N_1477 SN35N_1477 SN35N_1477 1540299 1540754 - nucleoside 2-deoxyribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~nucleoside 2-deoxyribosyltransferase [Lactobacillus plantarum WCFS1]%3B~nucleoside 2-deoxyribosyltransferase%3B pfam05014%3B~organism:Lactobacillus plantarum WCFS1 gene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1477 SN35N_1478 SN35N_1478 SN35N_1478 1540875 1541747 - oxidoreductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum P-8] gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1478 SN35N_1479 SN35N_1479 SN35N_1479 1541824 1542672 - 2%2C5 diketo-D-gluconic acid-like reductase 2%2C5 diketo-D-gluconic acid-like reductase [Lactobacillus plantarum ZJ316]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1479 SN35N_1480 SN35N_1480 SN35N_1480 1542916 1544109 - transport protein cyanate transporter%3B TIGR00896%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1480 SN35N_1481 SN35N_1481 SN35N_1481 1544174 1544503 - transcription regulator dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1481 SN35N_1482 SN35N_1482 SN35N_1482 1544564 1545796 - MFS family major facilitator transporter MFS family major facilitator transporter [Lactobacillus plantarum ZJ316]%3B~drug efflux system protein MdtG%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1482 SN35N_1483 SN35N_1483 SN35N_1483 1546466 1546921 + two-component system sensor protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF3021)%3B pfam11457%3B~two-component system sensor protein [Lactobacillus plantarum WCFS1] gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1483 SN35N_1484 SN35N_1484 hsp1 hsp1 1547009 1547431 - small heat shock protein identified by MetaGeneAnnotator%3B putative%3B~molecular chaperone (small heat shock protein) [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0071%3B~organism:Lactobacillus plantarum WCFS1%3B~putative dimer interface [polypeptide binding]%3B~small heat shock protein [Lactobacillus plantarum WCFS1] gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1484 SN35N_1485 SN35N_1485 SN35N_1485 1547577 1548050 - MarR family transcriptional regulator MarR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulators [transcription]%3B COG1846 gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1485 SN35N_1486 SN35N_1486 SN35N_1486 1548163 1548765 + NADPH-dependent FMN reductase family protein NADPH-dependent FMN reductase family protein [Lactobacillus plantarum WCFS1]%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted flavoprotein [general function prediction only] gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1486 SN35N_1487 SN35N_1487 SN35N_1487 1548831 1549025 + stress-responsive transcription regulator PspC domain%3B pfam04024%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~stress-responsive transcription regulator [Lactobacillus plantarum ZJ316] gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1487 SN35N_1488 SN35N_1488 SN35N_1488 1549068 1549826 - purine nucleoside phosphorylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphorylase superfamily%3B pfam01048%3B~purine nucleoside phosphorylase [Lactobacillus plantarum WCFS1] gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1488 SN35N_1489 SN35N_1489 pacL1 pacL1 1550111 1552849 + cation transporting P-type ATPase E1-E2 ATPase%3B pfam00122%3B~cation transport ATPase [inorganic ion transport and metabolism]%3B COG0474%3B~cation transporter/ATPase%2C N-terminus%3B smart00831%3B~cation transporting ATPase%2C C-terminus%3B pfam00689%3B~cation transporting P-type ATPase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum WCFS1%3B~putative hydrolase of sodium-potassium ATPase alpha subunit%3B pfam13246 gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1489 SN35N_1490 SN35N_1490 SN35N_1490 1553503 1554180 - CRISPR type II-A/NMEMI-associated protein Csn2 CRISPR type II-A/NMEMI-associated protein Csn2 [Lactobacillus plantarum ZJ316]%3B~CRISPR type II-A/NMEMI-associated protein Csn2%3B TIGR01866%3B~CRISPR/Cas system-associated protein Csn2%3B cd12218%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~tetramer interface [polypeptide binding] gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1490 SN35N_1491 SN35N_1491 cas2 cas2 1554177 1554482 - CRISPR-associated endoribonuclease Cas2 CRISPR-associated endoribonuclease Cas2 [Lactobacillus plantarum ZJ316]%3B~CRISPR/Cas system-associated protein Cas2%3B cd09638%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1491 SN35N_1492 SN35N_1492 cas1 cas1 1554460 1555365 - CRISPR-associated endonuclease Cas1 CRISPR-associated endonuclease Cas1 [Lactobacillus plantarum ZJ316]%3B~CRISPR/Cas system-associated protein Cas1%3B cl00656%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1492 SN35N_1493 SN35N_1493 SN35N_1493 1555560 1559636 - hypothetical protein hypothetical protein zj316_0330 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1493 SN35N_1494 SN35N_1494 SN35N_1494 1559925 1560707 - alpha-beta hydrolase superfamily alpha-beta hydrolase superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [general function prediction only]%3B COG0596 gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1494 SN35N_1495 SN35N_1495 SN35N_1495 1560732 1561439 - hypothetical protein hypothetical protein zj316_0328 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1495 SN35N_1496 SN35N_1496 SN35N_1496 1561545 1562909 - transport protein gamma-aminobutyrate permease and related permeases [amino acid transport and metabolism]%3B COG1113%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228%3B~transport protein [Staphylococcus aureus subsp. aureus ST228] gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1496 SN35N_1497 SN35N_1497 SN35N_1497 1563142 1563612 + NTP pyrophosphohydrolase NTP pyrophosphohydrolase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum ZJ316 gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1497 SN35N_1498 SN35N_1498 SN35N_1498 1563728 1565320 - DNA-binding protein with HIRAN domain DNA-binding protein with HIRAN domain [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~the HIRAN protein (HIP116%2C Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p%3B smart00910 gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1498 SN35N_1499 SN35N_1499 SN35N_1499 1565564 1566304 - glutamine amidotransferase catalytic triad [active]%3B~glutamine amidotransferase%2C class I [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~peptidase C26%3B pfam07722%3B~subgroup of proteins having the type 1 glutamine amidotransferase (GATase1) domain%3B cd01745 gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1499 SN35N_1500 SN35N_1500 SN35N_1500 1566386 1567585 - hydroxymethylpyrimidine permease Na binding site [ion binding]%3B~hydroxymethylpyrimidine permease [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative hydroxymethylpyrimidine transporter CytX%3B TIGR02358 gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1500 SN35N_1501 SN35N_1501 thiE thiE 1567585 1568238 - thiamine-phosphate diphosphorylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyrophosphate binding site [ion binding]%3B~thiamine phosphate binding site [chemical binding]%3B~thiamine-phosphate diphosphorylase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1501 SN35N_1502 SN35N_1502 SN35N_1502 1568228 1569052 - phosphomethylpyrimidine kinase ATP binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphomethylpyrimidine kinase [Lactobacillus rhamnosus GG]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~substrate binding site [chemical binding] gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1502 SN35N_1503 SN35N_1503 thiM thiM 1569078 1569869 - hydroxyethylthiazole kinase ATP binding site [chemical binding]%3B~hydroxyethylthiazole kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~multimerization interface [polypeptide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding site [chemical binding] gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1503 SN35N_1504 SN35N_1504 SN35N_1504 1570225 1571202 + oxidoreductase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~identified by MetaGeneAnnotator%3B putative%3B~medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family%3B cd08271%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~putative NAD(P) binding site [chemical binding]%3B~substrate binding site [chemical binding] gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1504 SN35N_1505 SN35N_1505 larE larE 1571402 1572232 - lactate racemization operon protein LarE ATP-utilizing enzymes of the PP-loop superfamily [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactate racemization operon protein LarE [Lactobacillus plantarum WCFS1]%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1505 SN35N_1506 SN35N_1506 glpF1 glpF1 1572257 1572973 - glycerol uptake facilitator protein Asn-Pro-Ala signature motifs%3B~amphipathic channel%3B~glycerol uptake facilitator and related permeases [carbohydrate transport and metabolism]%3B COG0580%3B~glycerol uptake facilitator protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1506 SN35N_1507 SN35N_1507 larC2 larC2 1572978 1573409 - lactate racemization operon protein LarC%2C C-terminal domain protein identified by MetaGeneAnnotator%3B putative%3B~lactate racemization operon protein LarC%2CC-terminal domain protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function DUF111%3B cl03398 gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1507 SN35N_1508 SN35N_1508 larC1 larC1 1573448 1574239 - lactate racemization operon protein LarC%2C N-terminal domain protein identified by MetaGeneAnnotator%3B putative%3B~lactate racemization operon protein LarC%2C N-termina l domain protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function DUF111%3B cl03398 gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1508 SN35N_1509 SN35N_1509 larB larB 1574270 1575010 - lactate racemization operon protein LarB AIR carboxylase%3B smart01001%3B~NCAIR mutase (PurE)-related proteins [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactate racemization operon protein LarB [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1509 SN35N_1510 SN35N_1510 larA larA 1575012 1576286 - lactate racemization operon protein LarA domain of unknown function (DUF2088)%3B cl15406%3B~identified by MetaGeneAnnotator%3B putative%3B~lactate racemization operon protein LarA [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1510 SN35N_1511 SN35N_1511 SN35N_1511 1576539 1577204 + transcription regulator%2C Crp/FNR family Crp-like helix-turn-helix domain%3B pfam13545%3B~DNA binding site [nucleotide binding]%3B~cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [signal transduction mechanisms]%3B COG0664%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA interactions [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative cAMP binding site [chemical binding]%3B~putative switch regulator%3B~sequence specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Crp/FNR family [Lactobacillus plantarum ZJ316] gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1511 SN35N_1512 SN35N_1512 SN35N_1512 1577219 1578205 + cobalamin biosynthesis protein PDGLE domain%3B pfam13190%3B~cobalamin biosynthesis protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~cobalt transport protein CbiM%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1512 SN35N_1513 SN35N_1513 SN35N_1513 1578180 1579001 + cobalt ABC transporter permease protein cobalt ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~cobalt transport protein%3B cl00463%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1513 SN35N_1514 SN35N_1514 SN35N_1514 1579003 1579734 + cobalt ABC transporter ATP-binding protein ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cobalt ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~cobalt transport protein ATP-binding subunit%3B TIGR01166%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1514 SN35N_1515 SN35N_1515 SN35N_1515 1579755 1579988 + hypothetical protein hypothetical protein zj316_0308 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1515 SN35N_1516 SN35N_1516 SN35N_1516 1580056 1580835 - adenylyl transferase NTP binding site [chemical binding]%3B~adenylyl transferase [Lactobacillus plantarum WCFS1 ]%3B~antibiotic binding site [chemical binding]%3B~domain of unknown function (DUF4111)%3B pfam13427%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding triad [ion binding]%3B~nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase%2C and similar proteins%3B cd05403%3B~organism:Lactobacillus plantarum WCFS1 gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1516 SN35N_1517 SN35N_1517 SN35N_1517 1581094 1581843 - hypothetical protein hypothetical protein zj316_0305 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1517 SN35N_1518 SN35N_1518 SN35N_1518 1582512 1584155 + oligopeptide ABC transporter%2C lipoprotein-binding protein ABC-type oligopeptide transport system%2C periplasmic component [amino acid transport and metabolism]%3B COG4166%3B~identified by MetaGeneAnnotator%3B putative%3B~oligopeptide ABC transporter%2Clipoprotein-binding protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1518 SN35N_1519 SN35N_1519 SN35N_1519 1584258 1584692 - pyridoxamine 5'-phosphate oxidase family protein%2C FMN-binding protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxamine 5'-phosphate oxidase family protein%2C FMN-binding protein [Lactobacillus plantarum ZJ316] gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1519 SN35N_1520 SN35N_1520 SN35N_1520 1584862 1585608 + UPF0246 protein UPF0246 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1520 SN35N_1521 SN35N_1521 SN35N_1521 1585790 1586653 - proline iminopeptidase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~proline iminopeptidase [Lactobacillus helveticus DPC 4571]%3B~proline-specific peptidases%2C Bacillus coagulans-type subfamily%3B TIGR01250 gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1521 SN35N_1522 SN35N_1522 SN35N_1522 1587676 1587831 + hypothetical protein hypothetical protein zj316_0298 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1522 SN35N_1523 SN35N_1523 SN35N_1523 1588034 1589368 + cation efflux protein Na+-driven multidrug efflux pump [defense mechanisms]%3B COG0534%3B~cation efflux protein[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA%3B cd13143 gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1523 SN35N_1524 SN35N_1524 SN35N_1524 1589539 1589862 - transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1524 SN35N_1525 SN35N_1525 SN35N_1525 1590029 1591033 + zinc-containing alcohol dehydrogenase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases%3B cd05289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative NAD(P) binding site [chemical binding]%3B~zinc-containing alcohol dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8] gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1525 SN35N_1526 SN35N_1526 SN35N_1526 1591071 1591745 + ThiJ/PfpI family protein%2C type 1 glutamine amidotransferase (GATase1)-like domain protein ThiJ/PfpI family protein%2C type 1 glutamine amidotra nsferase (GATase1)-like domain protein [Lactobacillus plantarum ZJ316]%3B~conserved cys residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~potential catalytic triad [active]%3B~putative intracellular protease/amidase [general function prediction only]%3B COG0693%3B~type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein%3B cd03141 gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1526 SN35N_1527 SN35N_1527 SN35N_1527 1591776 1592267 - acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase (GNAT) domain%3B pfam13673%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1527 SN35N_1528 SN35N_1528 SN35N_1528 1592455 1593339 - permease%2C drug/metabolite transporter (DMT) superfamily EamA-like transporter family%3B pfam00892%3B~carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~permease%2C drug/metabolite transporter (DMT) superfamily [Lactobacillus plantarum 16] gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1528 SN35N_1529 SN35N_1529 SN35N_1529 1593345 1593716 - hypothetical protein hypothetical protein zj316_0291 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function%3B pfam12395 gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1529 SN35N_1530 SN35N_1530 SN35N_1530 1593746 1594021 - hypothetical protein domain of unknown function (DUF1835)%3B pfam08874%3B~hypothetical protein zj316_0290 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1530 SN35N_1531 SN35N_1531 fusA1 fusA1 1594039 1596057 - elongation factor G GTP/Mg2+ binding site [chemical binding]%3B~Tet(M)-like family includes Tet(M)%2C Tet(O)%2C Tet(W)%2C and OtrA%2C containing tetracycline resistant proteins%3B cd04168%3B~elongation factor G [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative GEF interaction site [polypeptide binding]%3B~translation elongation factors (GTPases) [translation%2C ribosomal structure and biogenesis]%3B COG0480 gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1531 SN35N_1532 SN35N_1532 azoR1 azoR1 1596319 1596966 - FMN-dependent NADH-azoreductase FMN-dependent NADH-azoreductase [Lactobacillus plantarum ZJ316]%3B~flavodoxin-like fold%3B cl00438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1532 SN35N_1533 SN35N_1533 SN35N_1533 1597084 1598004 + hypothetical protein HTH domain%3B pfam08279%3B~WYL domain%3B pfam13280%3B~hypothetical protein zj316_0287 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulator [transcription] gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1533 SN35N_1534 SN35N_1534 SN35N_1534 1598092 1598760 - glutamine amidotransferase GMP synthase - glutamine amidotransferase domain [nucleotide transport and metabolism]%3B COG0518%3B~catalytic triad [active]%3B~glutamine amidotransferase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~subgroup of proteins having the type 1 glutamine amidotransferase (GATase1) domain%3B cd01741 gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1534 SN35N_1535 SN35N_1535 SN35N_1535 1598904 1599353 + RNA-binding protein%2C ASCH domain RNA-binding protein%2C ASCH domain [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1535 SN35N_1536 SN35N_1536 SN35N_1536 1599436 1600872 + 4-hydroxyphenylacetate-3-hydroxylase 4-hydroxyphenylacetate 3-hydroxylase C terminal%3B pfam03241%3B~4-hydroxyphenylacetate 3-monooxygenase%2C oxygenase component%3B TIGR02309%3B~4-hydroxyphenylacetate-3-hydroxylase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1536 SN35N_1537 SN35N_1537 ptp1 ptp1 1600945 1601691 - protein-tyrosine phosphatase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein-tyrosine phosphatase [Lactobacillus plantarum ZJ316]%3B~tyrosine phosphatase family C-terminal region%3B pfam13348%3B~tyrosine phosphatase family%3B pfam13350 gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1537 SN35N_1538 SN35N_1538 SN35N_1538 1601840 1603183 - hypothetical membrane protein hypothetical membrane protein%2C DUF1212 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1212)%3B pfam06738%3B~protein of unknown function (DUF3815)%3B cl01118%3B~uncharacterized conserved protein [function unknown] gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1538 SN35N_1539 SN35N_1539 pva1 pva1 1603457 1604473 + penicillin V acylase family protein identified by MetaGeneAnnotator%3B putative%3B~linear amide C-N hydrolases%2C choloylglycine hydrolase family%3B pfam02275%3B~organism:Lactobacillus plantarum WCFS1%3B~penicillin V acylase family protein [Lactobacillus plantarum WCFS1] gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1539 SN35N_1540 SN35N_1540 pgmB2 pgmB2 1604559 1605230 - beta-phosphoglucomutase beta-phosphoglucomutase [Lactobacillus plantarum WCFS1]%3B~beta-phosphoglucomutase%3B TIGR01990%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum WCFS1 gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1540 SN35N_1541 SN35N_1541 SN35N_1541 1605560 1607095 - hypothetical protein PucR C-terminal helix-turn-helix domain%3B pfam13556%3B~hypothetical protein zj316_0279 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1541 SN35N_1542 SN35N_1542 SN35N_1542 1607264 1607917 - nitroreductase FMN binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitroreductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1542 SN35N_1543 SN35N_1543 SN35N_1543 1607945 1608790 - acetoacetate decarboxylase acetoacetate decarboxylase (ADC)%3B cl01919%3B~acetoacetate decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1543 SN35N_1544 SN35N_1544 SN35N_1544 1608822 1609682 - short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316] gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1544 SN35N_1545 SN35N_1545 SN35N_1545 1610002 1610427 - protein tyrosine phosphatase identified by MetaGeneAnnotator%3B putative%3B~low molecular weight phosphatase family%3B cd00115%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~protein tyrosine phosphatase [Lactobacillus buchneri NRRL B-30929]%3B~protein-tyrosine-phosphatase [signal transduction mechanisms]%3B COG0394 gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1545 SN35N_1546 SN35N_1546 SN35N_1546 1610763 1611188 + flavoprotein flavodoxin%3B provisional%3B~flavoprotein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1546 SN35N_1547 SN35N_1547 SN35N_1547 1611258 1612145 - transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1547 SN35N_1548 SN35N_1548 SN35N_1548 1612255 1613670 - di- and tricarboxylate transporter di- and tricarboxylate transporter [Lactobacillus gasseri ATCC 33323]%3B~di- and tricarboxylate transporters [inorganic ion transport and metabolism]%3B COG0471%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~transmembrane helices gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1548 SN35N_1549 SN35N_1549 SN35N_1549 1614136 1616505 + fumarate reductase%2C flavoprotein subunit FAD binding domain%3B pfam00890%3B~FMN-binding domain%3B cl01081%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~fumarate reductase%2C flavoprotein subunit [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted flavoprotein [general function prediction only]%3B~putative FAD-binding dehydrogenase%3B reviewed gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1549 SN35N_1550 SN35N_1550 SN35N_1550 1616853 1617500 + fibronectin-binding protein fibronectin-binding protein (FBP)%3B pfam07299%3B~fibronectin-binding protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1550 SN35N_1551 SN35N_1551 SN35N_1551 1617567 1617935 - 6-pyruvoyl tetrahydrobiopterin synthase 6-pyruvoyl tetrahydrobiopterin synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~6-pyruvoyl tetrahydropterin synthase-related domain%3B TIGR03112%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1551 SN35N_1552 SN35N_1552 pnb pnb 1618050 1618700 - p-nitrobenzoate reductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~p-nitrobenzoate reductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~putative FMN binding site [chemical binding] gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1552 SN35N_1553 SN35N_1553 SN35N_1553 1618949 1619581 - uracil-DNA glycosylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative active site [active]%3B~putative uracil binding site [chemical binding]%3B~uncharacterized subfamily of uracil-DNA glycosylases%3B cd10033%3B~uracil-DNA glycosylase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1553 SN35N_1554 SN35N_1554 aldA aldA 1619789 1621216 - aldehyde dehydrogenase NAD(P) binding site [chemical binding]%3B~NAD(P)+-dependent aldehyde dehydrogenase superfamily%3B cl11961%3B~aldehyde dehydrogenase [Lactobacillus plantarum ZJ316]%3B~aldehyde dehydrogenase family protein%3B provisional%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1554 SN35N_1555 SN35N_1555 SN35N_1555 1621374 1622303 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1555 SN35N_1556 SN35N_1556 SN35N_1556 1622331 1622906 - transcription regulator%2C TetR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1556 SN35N_1557 SN35N_1557 SN35N_1557 1623385 1623864 - 50S rRNA methyltransferase 50S rRNA methyltransferase [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~rRNA large subunit methyltransferase%3B provisional gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1557 SN35N_1558 SN35N_1558 htrA htrA 1624419 1625681 - serine protease HtrA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein binding site [polypeptide binding]%3B~serine protease HtrA [Lactobacillus plantarum ZJ316]%3B~trypsin-like peptidase domain%3B pfam13365 gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1558 SN35N_1559 SN35N_1559 SN35N_1559 1625792 1626607 - Zn-dependent hydrolase%2C beta-lactamase superfamily Zn-dependent hydrolase%2C beta-lactamase superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal-dependent hydrolases of the beta-lactamase superfamily I [general function prediction only]%3B COG1235%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted Zn-dependent hydrolases of the beta-lactamase fold [general function prediction only] gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1559 SN35N_1560 SN35N_1560 SN35N_1560 1626966 1627820 - regulator of two-component system%2C YycI family YycH protein%3B pfam09648%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~regulator of two-component system%2C YycI family [Lactobacillus plantarum ZJ316] gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1560 SN35N_1561 SN35N_1561 SN35N_1561 1627832 1629157 - regulator of two-component system%2C YycH family YycH protein%3B pfam07435%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~regulator of two-component system%2C YycH family [Lactobacillus plantarum ZJ316] gene gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1561 SN35N_1562 SN35N_1562 hpk1 hpk1 1629138 1631012 - sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~dimerization interface [polypeptide binding]%3B~heme pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphorylation site [posttranslational modification]%3B~putative active site [active]%3B~sensor protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~signal transduction histidine kinase [signal transduction mechanisms]%3B COG5002 gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1562 SN35N_1563 SN35N_1563 phoP4 phoP4 1631026 1631733 - two-component response regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus rhamnosus GG%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~two-component response regulator [Lactobacillus rhamnosus GG] gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1563 SN35N_1564 SN35N_1564 SN35N_1564 1632308 1632532 - hypothetical protein hypothetical protein zj316_0256 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1564 SN35N_1565 SN35N_1565 SN35N_1565 1632624 1632824 - cold shock protein CspA DNA-binding site [nucleotide binding]%3B~RNA-binding motif%3B~cold shock protein CspA [Enterococcus faecium NRRL B-2354]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus faecium NRRL B-2354 gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1565 SN35N_1566 SN35N_1566 SN35N_1566 1633022 1633471 + pyridoxamine 5'-phosphate oxidase family protein%2C FMN-binding protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxamine 5'-phosphate oxidase family protein%2C FMN-binding protein [Lactobacillus plantarum ZJ316]%3B~pyridoxamine 5'-phosphate oxidase%3B pfam01243 gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1566 SN35N_1567 SN35N_1567 map1 map1 1633859 1636579 + maltose phosphorylase glycosyl hydrolase family 65 central catalytic domain%3B pfam03632%3B~glycosyl hydrolase family 65%2C C-terminal domain%3B pfam03633%3B~glycosyl hydrolase family 65%2C N-terminal domain%3B pfam03636%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose phosphorylase [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~trehalose and maltose hydrolases (possible phosphorylases) [carbohydrate transport and metabolism]%3B COG1554 gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1567 SN35N_1568 SN35N_1568 pgmB1 pgmB1 1636597 1637268 + beta-phosphoglucomutase beta-phosphoglucomutase [Lactobacillus plantarum subsp. plantarum P-8]%3B~beta-phosphoglucomutase%3B TIGR01990%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1568 SN35N_1569 SN35N_1569 SN35N_1569 1637420 1638187 - HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~haloacid dehalogenase-like hydrolase%3B cl17202%3B~identified by MetaGeneAnnotator%3B putative%3B~motif I%3B~motif II%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted hydrolases of the HAD superfamily [general function prediction only]%3B COG0561 gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1569 SN35N_1570 SN35N_1570 malZ malZ 1638520 1640337 - Maltodextrin glucosidase Maltodextrin glucosidase [Lactobacillus plantarum ZJ316]%3B~alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins%3B cd11338%3B~catalytic site [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1570 SN35N_1571 SN35N_1571 glgP glgP 1640355 1642727 - glycogen phosphorylase active site pocket [active]%3B~glycogen phosphorylase [Lactobacillus plantarum ZJ316]%3B~glycogen/starch/alpha-glucan phosphorylases%3B TIGR02093%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1571 SN35N_1572 SN35N_1572 SN35N_1572 1642747 1644186 - glycogen synthase%2C ADP-glucose transglycosylase ADP-binding pocket [chemical binding]%3B~glycogen synthase%2C ADP-glucose transglycosylase [Lactobacillus plantarum 16]%3B~glycogen synthase%3B provisional%3B PRK00654%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1572 SN35N_1573 SN35N_1573 glgD glgD 1644179 1645351 - glucose-1-P adenylyltransferase%2C regulatory subunit ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch%3B cd02508%3B~N-terminal domain interface [polypeptide binding]%3B~dimer interface [polypeptide binding]%3B~glucose-1-P adenylyltransferase%2C regulatory subunit [Lactobacillus plantarum ZJ316]%3B~glucose-1-phosphate adenylyltransferase%2C GlgD subunit%3B TIGR02092%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site%3B~oligomer interface%3B~organism:Lactobacillus plantarum ZJ316%3B~sulfate 1 binding site gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1573 SN35N_1574 SN35N_1574 glgC glgC 1645348 1646487 - glucose-1-phosphate adenylyltransferase ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch%3B cd02508%3B~N-terminal domain interface [polypeptide binding]%3B~catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate%3B~dimer interface [polypeptide binding]%3B~glucose-1-phosphate adenylyltransferase [Lactobacillus rhamnosus GG]%3B~glucose-1-phosphate adenylyltransferase%3B provisional%3B PRK05293%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site%3B~oligomer interface%3B~organism:Lactobacillus rhamnosus GG%3B~sulfate 1 binding site gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1574 SN35N_1575 SN35N_1575 SN35N_1575 1646477 1647997 - glycogen branching protein alpha amylase catalytic domain found in the glycogen branching enzyme (also called 1%2C4-alpha-glucan branching enzyme)%3B cd11322%3B~alpha amylase%2C C-terminal all-beta domain%3B pfam02806%3B~catalytic site [active]%3B~glycogen branching enzyme%3B provisional%3B~glycogen branching protein [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1575 SN35N_1576 SN35N_1576 SN35N_1576 1648007 1648381 - 1%2C4-alpha-glucan-branching protein 1%2C4-alpha-glucan-branching protein [Lactobacillus plantarum 16]%3B~N-terminal Early set domain associated with the catalytic domain of prokaryotic glycogen branching enzyme%3B cd02855%3B~alpha amylase catalytic domain found in the glycogen branching enzyme (also called 1%2C4-alpha-glucan branching enzyme)%3B cd11322%3B~glycogen branching enzyme%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1576 SN35N_1577 SN35N_1577 SN35N_1577 1648712 1650328 - lipoprotein precursor%2C peptide binding protein OppA-like protein ABC-type oligopeptide transport system%2C periplasmic component [amino acid transport and metabolism]%3B COG4166%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoprotein precursor%2C peptide binding protein OppA-like protein [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~peptide binding site [polypeptide binding]%3B~the substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold%3B cd08504 gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1577 SN35N_1578 SN35N_1578 proA proA 1650789 1652027 - gamma-glutamyl phosphate reductase catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway%3B~gamma-glutamyl phosphate reductase (GPR)%2C aldehyde dehydrogenase families 18 and 19%3B cd07079%3B~gamma-glutamyl phosphate reductase [Lactobacillus rhamnosus GG]%3B~gamma-glutamyl phosphate reductase%3B TIGR00407%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~putative catalytic cysteine [active] gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1578 SN35N_1579 SN35N_1579 proB proB 1652046 1652843 - glutamate 5-kinase gamma-glutamyl kinase%3B provisional%3B~glutamate 5-kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~homotetrameric interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative allosteric binding site%3B~putative phosphate binding site [ion binding] gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1579 SN35N_1580 SN35N_1580 SN35N_1580 1652865 1654088 - transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316] gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1580 SN35N_1581 SN35N_1581 SN35N_1581 1654310 1655734 - replicative DNA helicase ATP binding site [chemical binding]%3B~DNA binding loops [nucleotide binding]%3B~DnaB-like helicase N terminal domain%3B pfam00772%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~replicative DNA helicase [Lactobacillus rhamnosus GG]%3B~replicative DNA helicase%3B provisional%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~walker A motif%3B~walker B motif gene gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1581 SN35N_1582 SN35N_1582 rplI rplI 1655750 1656202 - 50S ribosomal protein L9 50S ribosomal protein L9 [Lactobacillus gasseri ATCC 33323]%3B~50S ribosomal protein L9%3B reviewed%3B PRK00137%3B~identified by MetaGeneAnnotator%3B putative%3B~in Escherichia coli this protein is wrapped around the base of the L1 stalk%3B~organism:Lactobacillus gasseri ATCC 33323%3B~ribosomal protein L9%2C C-terminal domain%3B pfam03948%3B~ribosomal protein L9%2C N-terminal domain%3B pfam01281 gene gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1582 SN35N_1583 SN35N_1583 SN35N_1583 1656215 1658227 - phosphoesterase%2C DHH family DHH family%3B pfam01368%3B~DHHA1 domain%3B pfam02272%3B~class III nucleotidyl cyclases%3B cl11967%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoesterase%2C DHH family [Lactobacillus plantarum ZJ316]%3B~predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [signal transduction mechanisms] gene gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1583 SN35N_1584 SN35N_1584 SN35N_1584 1658408 1658644 - 30S ribosomal protein S18 30S ribosomal protein S18 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S18%3B reviewed%3B PRK00391%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1584 SN35N_1585 SN35N_1585 ssb ssb 1658683 1659285 - single-strand binding protein dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~single-strand binding protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~single-stranded DNA-binding protein [DNA replication%2C recombination%2C and repair]%3B COG0629%3B~ssDNA binding site [nucleotide binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1585 SN35N_1586 SN35N_1586 SN35N_1586 1659322 1659621 - 30S ribosomal protein S6 30S ribosomal protein S6 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S6%3B reviewed%3B PRK00453%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1586 SN35N_1587 SN35N_1587 SN35N_1587 1660244 1662805 - DNA gyrase subunit A CAP-like domain%3B~DNA gyrase C-terminal domain%2C beta-propeller%3B pfam03989%3B~DNA gyrase subunit A [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~DNA gyrase subunit A%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~primary dimer interface [polypeptide binding] gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1587 SN35N_1588 SN35N_1588 SN35N_1588 1662970 1664916 - DNA gyrase subunit B ATP binding site [chemical binding]%3B~DNA gyrase B subunit%2C carboxyl terminus%3B pfam00986%3B~DNA gyrase subunit B [Melissococcus plutonius ATCC 35311]%3B~DNA gyrase subunit B%3B validated%3B PRK05644%3B~G-X-G motif%3B~GO:0003918%3B~Mg2+ binding site [ion binding]%3B~anchoring element%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Melissococcus plutonius ATCC 35311%3B~putative metal-binding site [ion binding]%3B~type strain of Melissococcus plutonius gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1588 SN35N_1589 SN35N_1589 recF recF 1664913 1666037 - DNA replication and repair protein RecF ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of RecF%3B cd03242%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~DNA replication and repair protein RecF [Lactobacillus plantarum ZJ316]%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~recombination protein F%3B reviewed%3B PRK00064%3B~walker A/P-loop%3B~walker B gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1589 SN35N_1590 SN35N_1590 SN35N_1590 1666038 1666271 - RNA-binding S4 protein RNA-binding S4 protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~S4 domain protein YaaA%3B TIGR02988%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1590 SN35N_1591 SN35N_1591 dnaN dnaN 1666795 1667934 - DNA polymerase III subunit beta DNA polymerase III subunit beta [Lactobacillus plantarum ZJ316]%3B~DNA polymerase III subunit beta%3B validated%3B~beta-clamp/clamp loader binding surface%3B~beta-clamp/translesion DNA polymerase binding surface%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding surface [nucleotide binding] gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1591 SN35N_1592 SN35N_1592 dnaA dnaA 1668112 1669479 - chromosome replication initiator DnaA ATP binding site [chemical binding]%3B~DnaA N-terminal domain%3B pfam11638%3B~DnaA box-binding interface [nucleotide binding]%3B~arginine finger%3B~binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.%3B~chromosomal replication initiation protein%3B reviewed%3B PRK00149%3B~chromosome replication initiator DnaA [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A motif%3B~walker B motif gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1592 SN35N_1593 SN35N_1593 SN35N_1593 1669545 1669721 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1593 SN35N_1594 SN35N_1594 rnpA rnpA 1670231 1670575 + ribonuclease P protein component identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribonuclease P protein component [Lactobacillus plantarum ZJ316]%3B~ribonuclease P%3B reviewed%3B PRK00499 gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1594 SN35N_1595 SN35N_1595 SN35N_1595 1670591 1671424 + membrane protein oxaA 1 60Kd inner membrane protein%3B cl00489%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein oxaA 1 [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~preprotein translocase subunit YidC [intracellular trafficking and secretion]%3B COG0706 gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1595 SN35N_1596 SN35N_1596 SN35N_1596 1671858 1672826 + single stranded DNA-binding protein G-X-X-G motif%3B~RxxxH motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted RNA-binding protein [general function prediction only]%3B COG1847%3B~single stranded DNA-binding protein [Lactobacillus plantarum ZJ316] gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1596 SN35N_1597 SN35N_1597 SN35N_1597 1673058 1674449 + tRNA modification GTPase mnmE GTP-binding protein TrmE N-terminus%3B pfam10396%3B~GTP/Mg2+ binding site [chemical binding]%3B~catalytic cysteine-containing C-terminus of GTPase%2C MnmE%3B pfam12631%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~tRNA modification GTPase TrmE%3B reviewed%3B PRK05291%3B~tRNA modification GTPase mnmE [Enterococcus casseliflavus EC20]%3B~trmE is a tRNA modification GTPase%3B cd04164 gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1597 SN35N_1598 SN35N_1598 SN35N_1598 1674468 1676378 + tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA GidA associated domain 3%3B pfam13932%3B~GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Lactobacillus helveticus DPC 4571]%3B~tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA%3B validated gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1598 SN35N_1599 SN35N_1599 SN35N_1599 1676637 1677371 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1599 SN35N_1600 SN35N_1600 SN35N_1600 1677524 1678579 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1600 SN35N_1601 SN35N_1601 SN35N_1601 1678599 1678940 + cell surface protein cell surface protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1601 SN35N_1602 SN35N_1602 SN35N_1602 1678960 1680417 + extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1602 SN35N_1603 SN35N_1603 SN35N_1603 1680488 1681486 + integrase catalytic subunit helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase catalytic subunit [Lactobacillus casei LC2W]%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus casei LC2W%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1603 SN35N_1604 SN35N_1604 sip3 sip3 1681829 1682416 + signal peptidase I catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~signal peptidase I [Lactobacillus plantarum ZJ316]%3B~signal peptidase I%2C bacterial type%3B TIGR02227 gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1604 SN35N_1605 SN35N_1605 SN35N_1605 1682493 1682654 + hypothetical protein hypothetical protein zj316_0211 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1605 SN35N_1606 SN35N_1606 pepC2 pepC2 1682644 1683960 + cysteine aminopeptidase G bulge%3B~cysteine aminopeptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~trimer interface [polypeptide binding] gene gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1606 SN35N_1607 SN35N_1607 SN35N_1607 1683973 1684395 + transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1607 SN35N_1608 SN35N_1608 SN35N_1608 1684494 1685360 - DegV family protein DegV family protein [Lactobacillus plantarum ZJ316]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1608 SN35N_1609 SN35N_1609 SN35N_1609 1685518 1686000 + acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase (GNAT) domain%3B pfam13673%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1609 SN35N_1610 SN35N_1610 SN35N_1610 1686795 1687589 + 2-oxo-hept-3-ene-1%2C7-dioate hydratase%3B 2-oxo-hept-4-ene-1%2C7-dioate hydratase 2-oxo-hept-3-ene-1%2C7-dioate hydratase%3B 2-oxo-hept-4 -ene-1%2C7-dioate hydratase [Lactobacillus plantarum subsp. plantarum P-8]%3B~fumarylacetoacetate (FAA) hydrolase family%3B cl11421%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1610 SN35N_1611 SN35N_1611 SN35N_1611 1687751 1688287 - phenolic acid decarboxylase GI:332687380%3B~Phenolic acid decarboxylase (PAD)%3B cl01382%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Melissococcus plutonius DAT561%3B~phenolic acid decarboxylase [Melissococcus plutonius DAT561] gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1611 SN35N_1612 SN35N_1612 padR padR 1688403 1688948 + transcriptional regulator of phenolic acid metabolism%2C PadR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcriptional regulator PadR-like family%3B pfam03551%3B~transcriptional regulator of phenolic acid metabolism%2C PadR family [Lactobacillus plantarum ZJ316]%3B~virulence activator alpha C-term%3B pfam10400 gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1612 SN35N_1613 SN35N_1613 SN35N_1613 1689139 1689600 + nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1613 SN35N_1614 SN35N_1614 adhE adhE 1689889 1692492 + bifunctional acetaldehyde-CoA/alcohol dehydrogenase C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD)%3B cd08178%3B~bifunctional acetaldehyde-CoA/alcohol dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8]%3B~bifunctional acetaldehyde-CoA/alcohol dehydrogenase%3B provisional%3B~coenzyme A acylating aldehyde dehydrogenase (ACDH)%2C ALDH family 20-like%3B cd07122%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative active site [active]%3B~putative catalytic cysteine [active] gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1614 SN35N_1615 SN35N_1615 rbsR rbsR 1692752 1693750 + transcription regulator%2C LacI family%2C ribose DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily%3B cd06267%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C LacI family%2C ribose [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1615 SN35N_1616 SN35N_1616 rbsK3 rbsK3 1693854 1694774 + ribokinase ATP binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribokinase [Lactobacillus plantarum ZJ316]%3B~substrate binding site [chemical binding]%3B~sugar kinases%2C ribokinase family [carbohydrate transport and metabolism]%3B COG0524 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1616 SN35N_1617 SN35N_1617 SN35N_1617 1694777 1695172 + D-ribose pyranase D-ribose pyranase [Lactobacillus gasseri ATCC 33323 ]%3B~RbsD / FucU transport protein family%3B cl00809%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1617 SN35N_1618 SN35N_1618 SN35N_1618 1695202 1696086 + putative ribose uptake protein rbsU identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228%3B~putative ribose uptake protein rbsU [Staphylococcus aureus subsp. aureus ST228]%3B~sugar transport protein%3B pfam06800 gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1618 SN35N_1619 SN35N_1619 sorD sorD 1696391 1697194 + sorbitol-6-phosphate 2-dehydrogenase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~converts D-sorbitol-dphosphate to D-fructose-6-phosphate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~sorbitol-6-phosphate 2-dehydrogenase [Lactobacillus rhamnosus GG]%3B~sorbitol-6-phosphate 2-dehydrogenase%3B provisional gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1619 SN35N_1620 SN35N_1620 SN35N_1620 1697228 1699093 + sorbitol operon transcription antiterminator%2C BglG family HTH domain%3B pfam08279%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phosphoenolpyruvate-dependent sugar phosphotransferase system%2C EIIA 2%3B pfam00359%3B~phosphorylation site [posttranslational modification]%3B~sorbitol operon transcription antiterminator%2CBglG f amily [Lactobacillus plantarum 16]%3B~transcriptional antiterminator [transcription]%3B COG3711 gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1620 SN35N_1621 SN35N_1621 srlM2 srlM2 1699093 1699599 + sorbitol operon activator glucitol operon activator protein (GutM)%3B pfam06923%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sorbitol operon activator [Lactobacillus plantarum ZJ316] gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1621 SN35N_1622 SN35N_1622 pts38C pts38C 1699604 1700155 + PTS system%2C glucitol/sorbitol-specific EIIC component PTS system enzyme II sorbitol-specific factor%3B pfam03608%3B~PTS system%2C glucitol/sorbitol-specific EIIC component [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1622 SN35N_1623 SN35N_1623 pts38BC pts38BC 1700179 1701198 + PTS system%2C glucitol/sorbitol-specific EIIB component and second of two IIC components PTS system%2C glucitol/sorbitol-specific EIIB component and second of two IIC components [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphotransferase system sorbitol-specific component IIBC [carbohydrate transport and metabolism]%3B COG3732%3B~sorbitol phosphotransferase enzyme II C-terminus%3B pfam07663%3B~sorbitol phosphotransferase enzyme II N-terminus%3B pfam03612 gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1623 SN35N_1624 SN35N_1624 pts38A pts38A 1701226 1701603 + PTS system%2C glucitol/sorbitol-specific EIIA component PTS system glucitol/sorbitol-specific IIA component%3B pfam03829%3B~PTS system%2C glucitol/sorbitol-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1624 SN35N_1625 SN35N_1625 pox5 pox5 1701974 1703785 + pyruvate oxidase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyrimidine (PYR) binding domain of POX%3B cd07039%3B~pyruvate oxidase [Lactobacillus plantarum JDM1]%3B~pyruvate oxidase%3B TIGR02720%3B~tetramer interface [polypeptide binding]%3B~thiamine pyrophosphate enzyme%2C central domain%3B pfam00205 gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1625 SN35N_1626 SN35N_1626 SN35N_1626 1703958 1704383 + transcription regulator%2C Rrf2 family Rrf2 family protein%3B TIGR00738%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C Rrf2 family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator%3B cl17282%3B~transcriptional regulator%3B pfam02082 gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1626 SN35N_1627 SN35N_1627 pox4 pox4 1704471 1706219 + pyruvate oxidase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyrimidine (PYR) binding domain of POX%3B cd07039%3B~pyruvate oxidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~pyruvate oxidase%3B provisional%3B~tetramer interface [polypeptide binding]%3B~thiamine pyrophosphate enzyme%2C central domain%3B pfam00205 gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1627 SN35N_1628 SN35N_1628 SN35N_1628 1706246 1707346 + NAD-independent L-lactate dehydrogenase FMN binding site [chemical binding]%3B~L-lactate oxidase%3B TIGR02708%3B~NAD-independent L-lactate dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~teramer interface [polypeptide binding] gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1628 SN35N_1629 SN35N_1629 SN35N_1629 1707983 1708216 + hypothetical protein hypothetical protein zj316_0186 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1629 SN35N_1630 SN35N_1630 SN35N_1630 1708607 1710721 + ATP-dependent Clp protease ATP-binding protein ATP binding site [chemical binding]%3B~ATP-dependent Clp protease ATP-binding protein [Listeria monocytogenes]%3B~ATPases associated with a variety of cellular activities%3B smart00382%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B smart01086%3B~arginine finger%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~walker A motif%3B~walker B motif gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1630 SN35N_1631 SN35N_1631 SN35N_1631 1710909 1711280 + putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1631 SN35N_1632 SN35N_1632 SN35N_1632 1711253 1711684 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1632 SN35N_1633 SN35N_1633 agrB agrB 1711944 1712540 + putative AgrB-like protein accessory gene regulator B%3B smart00793%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative AgrB-like protein [Lactobacillus plantarum ZJ316] gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1633 SN35N_1634 SN35N_1634 SN35N_1634 1712521 1712649 + auto-inducing peptide (AIP) precursor auto-inducing peptide (AIP) precursor [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~staphylococcal AgrD protein%3B cl05477 gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1634 SN35N_1635 SN35N_1635 SN35N_1635 1713199 1713921 + two-component system histidine protein kinase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~predicted signal transduction protein with a C-terminal ATPase domain [signal transduction mechanisms]%3B~two-component system histidine protein kinase [Lactobacillus plantarum 16] gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1635 SN35N_1636 SN35N_1636 SN35N_1636 1713914 1714657 + two-component system response regulator LytTr DNA-binding domain%3B pfam04397%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum 16%3B~phosphorylation site [posttranslational modification]%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279%3B~two-component system response regulator [Lactobacillus plantarum 16] gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1636 SN35N_1637 SN35N_1637 nrpR5 nrpR5 1715013 1715450 + negative regulator of proteolysis ArsC family%3B pfam03960%3B~identified by MetaGeneAnnotator%3B putative%3B~negative regulator of proteolysis [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative catalytic residues [active]%3B~thiol/disulfide switch gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1637 SN35N_1638 SN35N_1638 kat kat 1715608 1717062 - catalase catalase [Lactobacillus plantarum subsp. plantarum P-8]%3B~catalase [inorganic ion transport and metabolism]%3B COG0753%3B~catalase-like heme-binding proteins and protein domains%3B cl09506%3B~heme binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1638 SN35N_1639 SN35N_1639 SN35N_1639 1717408 1717653 + transglycosylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus H10%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1639 SN35N_1640 SN35N_1640 SN35N_1640 1717670 1717804 + hypothetical protein hypothetical protein zj316_0178 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1640 SN35N_1641 SN35N_1641 SN35N_1641 1717999 1718547 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~protein of unknown function (DUF3816)%3B pfam12822 gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1641 SN35N_1642 SN35N_1642 SN35N_1642 1718584 1718778 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum NC8 gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1642 SN35N_1643 SN35N_1643 SN35N_1643 1718743 1719114 - pyrimidine dimer DNA glycosylase conserved hypothetical protein%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyrimidine dimer DNA glycosylase [Lactobacillus plantarum ZJ316]%3B~pyrimidine dimer DNA glycosylase%3B pfam03013 gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1643 SN35N_1644 SN35N_1644 SN35N_1644 1719582 1720787 + NAD(FAD)-dependent dehydrogenase NAD(FAD)-dependent dehydrogenase [Lactobacillus brevis ATCC 367]%3B~NAD(P)-binding rossmann-like domain%3B cl17500%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 367%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam07992 gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1644 SN35N_1645 SN35N_1645 nanE nanE 1720926 1721612 - N-acetylmannosamine-6-phosphate 2-epimerase N-acetylmannosamine-6-phosphate 2-epimerase [Lactobacillus salivarius UCC118]%3B~N-acetylmannosamine-6-phosphate 2-epimerase%3B provisional%3B~converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~putative active site cavity [active] gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1645 SN35N_1646 SN35N_1646 araR araR 1722015 1723091 + arabinose operon repressor DNA-binding site [nucleotide binding]%3B~arabinose operon repressor [Lactobacillus plantarum JDM1]%3B~gluconate operon transcriptional regulator%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators%3B cd01541%3B~organism:Lactobacillus plantarum JDM1%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1646 SN35N_1647 SN35N_1647 araT araT 1723386 1724786 + arabinose transport protein arabinose transport protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~sugar (and other) transporter%3B pfam00083 gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1647 SN35N_1648 SN35N_1648 SN35N_1648 1724803 1726404 + carbohydrate kinase FGGY L-ribulokinase-like proteins%3B a subfamily of the FGGY family of carbohydrate kinases%3B cd07778%3B~MgATP binding site [chemical binding]%3B~PFAM: carbohydrate kinase%2C FGGY%2C N-terminal%3B carbohydrate kinase%2C FGGY%2C C-terminal%3B KEGG: lbr:LVIS_1742 L-ribulokinase%3B~carbohydrate kinase FGGY [Bacillus coagulans 36D1]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Bacillus coagulans 36D1%3B~putative N- and C-terminal domain interface [polypeptide binding]%3B~putative active site [active]%3B~putative carbohydrate binding site [chemical binding]%3B~sugar (pentulose and hexulose) kinases [carbohydrate transport and metabolism]%3B COG1070 gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1648 SN35N_1649 SN35N_1649 SN35N_1649 1726422 1727150 + L-ribulose-5-phosphate 4-epimerase L-ribulose-5-phosphate 4-epimerase [Lactobacillus brevis KB290]%3B~L-ribulose-5-phosphate 4-epimerase%3B reviewed%3B PRK08193%3B~Zn2+ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intersubunit interface [polypeptide binding]%3B~organism:Lactobacillus brevis KB290 gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1649 SN35N_1650 SN35N_1650 SN35N_1650 1727202 1728626 + L-arabinose isomerase HAMAP: L-arabinose isomerase%3B KEGG: lbr:LVIS_1740 L-arabinose isomerase%3B PFAM: L-arabinose isomerase%3B~L-arabinose isomerase [Lactobacillus buchneri NRRL B-330929]%3B~L-arabinose isomerase%3B provisional%3B~Mn binding site [ion binding]%3B~hexamer (dimer of trimers) interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1650 SN35N_1651 SN35N_1651 araO araO 1728707 1729267 + arabinose O-acetyltransferase CoA binding site [chemical binding]%3B~arabinose O-acetyltransferase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Lactobacillus plantarum WCFS1%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1651 SN35N_1652 SN35N_1652 SN35N_1652 1729349 1729747 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1652 SN35N_1653 SN35N_1653 xpk2 xpk2 1729827 1732217 - phosphoketolase TPP-binding site%3B~XFP C-terminal domain%3B pfam09363%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphoketolase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~putative phosphoketolase%3B provisional gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1653 SN35N_1654 SN35N_1654 SN35N_1654 1732386 1733153 - transcription regulator DeoR C terminal sensor domain%3B pfam00455%3B~helix_turn_helix%2C deoxyribose operon repressor%3B smart00420%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulators of sugar metabolism [transcription / carbohydrate transport and metabolism]%3B COG1349 gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1654 SN35N_1655 SN35N_1655 SN35N_1655 1733287 1734318 - putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1655 SN35N_1656 SN35N_1656 pts35A pts35A 1734728 1735198 + PTS system%2C galactitol-specific EIIA component PTS system%2C galactitol-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1656 SN35N_1657 SN35N_1657 pts35B pts35B 1735233 1735529 + PTS system%2C galactitol-specific EIIB component P-loop%3B~PTS system%2C galactitol-specific EIIB component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1657 SN35N_1658 SN35N_1658 gatC gatC 1735564 1736835 + PTS galactitol transporter subunit IIC PTS galactitol transporter subunit IIC [Listeria monocytogenes]%3B~PTS system sugar-specific permease component%3B cl04451%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphotransferase system%2C galactitol-specific IIC component [carbohydrate transport and metabolism]%3B COG3775 gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1658 SN35N_1659 SN35N_1659 gutB gutB 1736865 1737974 + L-iditol 2-dehydrogenase L-iditol 2-dehydrogenase [Lactobacillus plantarum ZJ316]%3B~alcohol dehydrogenases of the MDR family%3B cd08258%3B~catalytic Zn binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative NAD(P) binding site [chemical binding]%3B~structural Zn binding site [ion binding]%3B~threonine dehydrogenase and related Zn-dependent dehydrogenases [amino acid transport and metabolism / general function prediction only]%3B COG1063 gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1659 SN35N_1660 SN35N_1660 gph3 gph3 1738080 1738703 + phosphohydrolase identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphohydrolase%2C possibly 2-phosphoglycolate phosp hohydrolase or inorganic pyrophosphatase [Lactobacillus plantarum ZJ316]%3B~predicted phosphatases [general function prediction only]%3B COG0546 gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1660 SN35N_1661 SN35N_1661 SN35N_1661 1738843 1740894 - bifunctional protein: transcription regulator%3B PTS system%2C mannitol(cryptic)-specific EIIA component P-loop%3B~PRD domain%3B pfam00874%3B~bifunctional protein: transcription regulator%3B PTS system%2C mannitol(cryptic)-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~transcriptional antiterminator [transcription]%3B COG3711 gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1661 SN35N_1662 SN35N_1662 pts34A pts34A 1741065 1741523 + PTS system%2C mannitol-specific EIIA component PTS system%2C mannitol-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1662 SN35N_1663 SN35N_1663 pts34B pts34B 1741536 1741832 + PTS system%2C lactose/cellobiose-specific EIIB component P-loop%3B~PTS system%2C lactose/cellobiose-specific EIIB component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1663 SN35N_1664 SN35N_1664 SN35N_1664 1741856 1743226 + PTS family ascorbate porter%2C IIC component PTS family ascorbate porter%2C IIC component [Lactobacillus plantarum subsp. plantarum ST-III]%3B~PTS system ascorbate-specific transporter subunit IIC%3B reviewed%3B PRK09410%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1664 SN35N_1665 SN35N_1665 SN35N_1665 1743293 1743946 + transaldolase catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~intersubunit interactions%3B~organism:Listeria monocytogenes%3B~transaldolase [Listeria monocytogenes]%3B~transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea%3B cd00956 gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1665 SN35N_1666 SN35N_1666 tktA tktA 1743976 1745973 + transketolase COG0021 [G] transketolase%3B~PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS)%2C transketolase (TK)%2C and related proteins%3B cd07033%3B~transketolase [Lactobacillus salivarius UCC118]%3B~transketolase [carbohydrate transport and metabolism]%3B COG0021 gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1666 SN35N_1667 SN35N_1667 SN35N_1667 1746046 1746861 + HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~sugar phosphate phosphatase%3B provisional gene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1667 SN35N_1668 SN35N_1668 SN35N_1668 1747069 1748043 + choloylglycine hydrolase choloylglycine hydrolase [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~linear amide C-N hydrolases%2C choloylglycine hydrolase family%3B pfam02275%3B~organism:Listeria monocytogenes gene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1668 SN35N_1669 SN35N_1669 SN35N_1669 1748144 1748380 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1669 SN35N_1670 SN35N_1670 SN35N_1670 1748472 1750772 - alpha-glucosidase COG1501 alpha-glucosidases%2C family 31 of glycosyl hydrolases%3B~alpha-glucosidase [Lactobacillus amylovorus GRL 1112]%3B~catalytic site [active]%3B~galactose mutarotase-like%3B pfam13802%3B~homohexamer (dimer of homotrimer) interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~putative alpha-glucosidase%3B provisional%3B~trimer interface [polypeptide binding] gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1670 SN35N_1671 SN35N_1671 SN35N_1671 1750803 1752224 - sugar transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~sugar transport protein [Lactobacillus plantarum JDM1] gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1671 SN35N_1672 SN35N_1672 SN35N_1672 1752394 1753371 + transcription regulator%2C LacI family DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily%3B cd06267%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C LacI family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1672 SN35N_1673 SN35N_1673 map4 map4 1753619 1755823 + maltose phosphorylase glycosyl hydrolase family 65 central catalytic domain%3B pfam03632%3B~glycosyl hydrolase family 65%2C C-terminal domain%3B pfam03633%3B~glycosyl hydrolase family 65%2C N-terminal domain%3B pfam03636%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose phosphorylase [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~trehalose and maltose hydrolases (possible phosphorylases) [carbohydrate transport and metabolism]%3B COG1554 gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1673 SN35N_1674 SN35N_1674 bglG5 bglG5 1756045 1756893 + transcription antiterminator CAT RNA binding domain%3B smart01061%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transcription antiterminator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional antiterminator BglG%3B provisional gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1674 SN35N_1675 SN35N_1675 SN35N_1675 1757064 1759061 + trehalose PTS trehalose component IIBC HPr interaction site%3B~PTS system%2C beta-glucoside-specific IIABC component%3B TIGR01995%3B~active site turn [active]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B cl00557%3B~trehalose PTS trehalose component IIBC [Lactobacillus gasseri ATCC 33323] gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1675 SN35N_1676 SN35N_1676 SN35N_1676 1759082 1760545 + 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Listeria monocytogenes]%3B~beta-galactosidase%3B TIGR03356%3B~beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [carbohydrate transport and metabolism]%3B COG2723%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1676 SN35N_1677 SN35N_1677 pbg9 pbg9 1760634 1762082 + 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus plantarum ZJ316]%3B~beta-galactosidase%3B TIGR03356%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1677 SN35N_1678 SN35N_1678 bglG4 bglG4 1762329 1763174 + transcription antiterminator%2C BlgB family CAT RNA binding domain%3B smart01061%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcription antiterminator%2C BlgB family [Lactobacillus plantarum WCFS1]%3B~transcriptional antiterminator BglG%3B provisional gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1678 SN35N_1679 SN35N_1679 pts30BCA pts30BCA 1763299 1765173 + beta-glucosides PTS%2C EIIBCA HPr interaction site%3B~PTS system%2C beta-glucoside-specific IIABC component%3B TIGR01995%3B~active site turn [active]%3B~beta-glucosides PTS%2C EIIBCA [Lactobacillus plantarum JDM1]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1679 SN35N_1680 SN35N_1680 pbg8 pbg8 1765166 1766626 + 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~beta-galactosidase%3B TIGR03356%3B~beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [carbohydrate transport and metabolism]%3B COG2723%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1680 SN35N_1681 SN35N_1681 SN35N_1681 1766848 1767936 - PTS-associated protein PTS-associated protein [Lactobacillus plantarum ZJ316]%3B~bacterial protein of unknown function (DUF871)%3B pfam05913%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown] gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1681 SN35N_1682 SN35N_1682 SN35N_1682 1767933 1768841 - N-acetylglucosamine kinase BadF/BadG/BcrA/BcrD ATPase family%3B cl17271%3B~N-acetylglucosamine kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1682 SN35N_1683 SN35N_1683 SN35N_1683 1768853 1769803 - N-acetylmuramic acid-6-phosphate etherase N-acetylmuramic acid-6-phosphate etherase [Lactobacillus plantarum JDM1]%3B~N-acetylmuramic acid-6-phosphate etherase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative active site [active] gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1683 SN35N_1684 SN35N_1684 pts29C pts29C 1769960 1771297 - cellobiose PTS%2C EIIC cellobiose PTS%2C EIIC [Lactobacillus plantarum JDM1]%3B~cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1684 SN35N_1685 SN35N_1685 SN35N_1685 1771518 1772249 + transcription regulator DNA-binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~the UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain%3B smart00866%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1685 SN35N_1686 SN35N_1686 estA estA 1772279 1773070 + acetyl esterase S-formylglutathione hydrolase%3B~acetyl esterase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative esterase%3B pfam00756%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1686 SN35N_1687 SN35N_1687 SN35N_1687 1773063 1773434 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1687 SN35N_1688 SN35N_1688 SN35N_1688 1773557 1774780 - transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum ZJ316] gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1688 SN35N_1689 SN35N_1689 SN35N_1689 1775048 1775953 - transcription regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative dimerization interface [polypeptide binding]%3B~the substrate binding domain of LysR-type transcriptional regulator GltC%2C which activates gltA expression of glutamate synthase operon%2C contains type 2 periplasmic binding fold%3B cd08434%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1689 SN35N_1690 SN35N_1690 SN35N_1690 1776177 1777028 + sugar phosphate isomerase/epimerase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~sugar phosphate isomerase/epimerase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~xylose isomerase-like TIM barrel%3B pfam01261 gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1690 SN35N_1691 SN35N_1691 kduD kduD 1777056 1777895 + 2-deoxy-D-gluconate 3-dehydrogenase 2-deoxy-D-gluconate 3-dehydrogenase [Lactobacillus salivarius UCC118]%3B~3-ketoacyl-(acyl-carrier-protein) reductase%3B validated%3B PRK05557%3B~COG1028 [IQR] dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)%3B~NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118 gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1691 SN35N_1692 SN35N_1692 SN35N_1692 1777983 1778867 + shikimate 5-dehydrogenase NAD(P) binding domain of shikimate dehydrogenase%3B cd01065%3B~NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~shikimate 5-dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~shikimate 5-dehydrogenase%3B provisional%3B~shikimate binding site%3B~shikimate dehydrogenase substrate binding domain%3B pfam08501 gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1692 SN35N_1693 SN35N_1693 aroD3 aroD3 1778885 1779769 + shikimate 5-dehydrogenase NAD(P) binding domain of shikimate dehydrogenase%3B cd01065%3B~NAD(P) binding site [chemical binding]%3B~catalyzes the conversion of shikimate to 3-dehydroshikimate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~shikimate 5-dehydrogenase [Lactobacillus plantarum JDM1]%3B~shikimate 5-dehydrogenase%3B provisional%3B~shikimate binding site%3B~shikimate dehydrogenase substrate binding domain%3B pfam08501 gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1693 SN35N_1694 SN35N_1694 SN35N_1694 1779771 1781012 + transport protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum JDM1] gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1694 SN35N_1695 SN35N_1695 SN35N_1695 1781046 1781975 - transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimerization interface [polypeptide binding]%3B~the substrate binding domain of LysR-type transcriptional regulator GltC%2C which activates gltA expression of glutamate synthase operon%2C contains type 2 periplasmic binding fold%3B cd08434%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1695 SN35N_1696 SN35N_1696 aroE aroE 1782114 1782998 + shikimate 5-dehydrogenase AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate%3B~NAD(P) binding domain of shikimate dehydrogenase%3B cd01065%3B~NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus salivarius UCC118%3B~shikimate 5-dehydrogenase [Lactobacillus salivarius UCC118]%3B~shikimate 5-dehydrogenase%3B provisional%3B~shikimate binding site%3B~shikimate dehydrogenase substrate binding domain%3B pfam08501 gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1696 SN35N_1697 SN35N_1697 aroD aroD 1783022 1783780 + 3-dehydroquinate dehydratase 3-dehydroquinate dehydratase [Lactobacillus plantarum ZJ316]%3B~3-dehydroquinate dehydratase [amino acid transport and metabolism]%3B COG0710%3B~catalytic residue [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~type I 3-dehydroquinase%2C (3-dehydroquinate dehydratase or DHQase)%3B cd00502 gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1697 SN35N_1698 SN35N_1698 apbE3 apbE3 1783814 1784770 + thiamin biosynthesis lipoprotein ApbE ApbE family%3B pfam02424%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-associated lipoprotein involved in thiamine biosynthesis [coenzyme metabolism]%3B COG1477%3B~organism:Lactobacillus plantarum ZJ316%3B~thiamin biosynthesis lipoprotein ApbE [Lactobacillus plantarum ZJ316] gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1698 SN35N_1699 SN35N_1699 SN35N_1699 1784763 1787054 + fumarate reductase%2C flavoprotein subunit FMN-binding domain%3B cl01081%3B~L-aspartate oxidase%3B provisional%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~flavocytochrome c%3B TIGR01813%3B~fumarate reductase%2C flavoprotein subunit [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted flavoprotein [general function prediction only] gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1699 SN35N_1700 SN35N_1700 SN35N_1700 1787214 1788143 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1700 SN35N_1701 SN35N_1701 SN35N_1701 1788166 1788534 - FMN-binding protein FMN-binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxamine 5'-phosphate oxidase%3B pfam01243 gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1701 SN35N_1702 SN35N_1702 SN35N_1702 1788718 1789740 + aldo/keto reductase family protein aldo/keto reductase family protein [Lactobacillus plantarum ZJ316]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1702 SN35N_1703 SN35N_1703 galR2 galR2 1790066 1791061 + galactose operon repressor DNA binding site [nucleotide binding]%3B~domain linker motif%3B~galactose operon repressor [Lactobacillus plantarum subsp. plantarum P-8]%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of DNA transcription repressor GalR which is one of two regulatory proteins involved in galactose transport and metabolism%3B cd01544%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1703 SN35N_1704 SN35N_1704 galM3 galM3 1791190 1792218 + aldose 1-epimerase aldose 1-epimerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~catalytic residues [active]%3B~galactose mutarotase_like%3B cd09019%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1704 SN35N_1705 SN35N_1705 lacS2 lacS2 1792546 1794504 + sugar transport protein HPr interaction site%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphorylation site [posttranslational modification]%3B~sugar (Glycoside-pentoside-Hexuronide) transporter%3B TIGR00792%3B~sugar transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1705 SN35N_1706 SN35N_1706 melA2 melA2 1794601 1796817 + alpha-galactosidase alpha-galactosidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~alpha-galactosidase [carbohydrate transport and metabolism]%3B COG3345%3B~identified by MetaGeneAnnotator%3B putative%3B~melibiase%3B pfam02065%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1706 SN35N_1707 SN35N_1707 lacM lacM 1796917 1797876 - beta-galactosidase beta galactosidase small chain%3B pfam02929%3B~beta-galactosidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1707 SN35N_1708 SN35N_1708 lacL lacL 1797860 1799740 - beta-galactosidase large subunit beta-galactosidase large subunit [Lactobacillus plantarum subsp. plantarum P-8]%3B~glycosyl hydrolases family 2%2C TIM barrel domain%3B pfam02836%3B~glycosyl hydrolases family 2%2C sugar binding domain%3B pfam02837%3B~glycosyl hydrolases family 2%3B pfam00703%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1708 SN35N_1709 SN35N_1709 SN35N_1709 1800024 1801187 + galactokinase GHMP kinases C terminal%3B pfam08544%3B~GHMP kinases N terminal domain%3B pfam00288%3B~galactokinase [Pediococcus acidilactici 7_4]%3B~galactokinase galactose-binding signature%3B pfam10509%3B~galactokinase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4 gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1709 SN35N_1710 SN35N_1710 galE4 galE4 1801252 1802256 + UDP-glucose 4-epimerase NAD binding site [chemical binding]%3B~UDP-glucose 4 epimerase%2C subgroup 1%2C extended (e) SDRs%3B cd05247%3B~UDP-glucose 4-epimerase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~UDP-glucose 4-epimerase [cell envelope biogenesis%2C outer membrane]%3B COG1087%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~substrate binding site [chemical binding] gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1710 SN35N_1711 SN35N_1711 SN35N_1711 1802256 1803719 + galactose-1-phosphate uridylyltransferase galactose-1-phosphate uridylyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~galactose-1-phosphate uridylyltransferase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1711 SN35N_1712 SN35N_1712 galR galR 1803859 1804860 + transcription regulator%2C LacI family%2C galactose related protein DNA binding site [nucleotide binding]%3B~DNA-binding transcriptional repressor EbgR%3B provisional%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of DNA transcription repressor GalR which is one of two regulatory proteins involved in galactose transport and metabolism%3B cd01544%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcription regulator%2C LacI family%2C galactose rel ated protein [Lactobacillus plantarum ZJ316] gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1712 SN35N_1713 SN35N_1713 SN35N_1713 1805099 1805545 + XRE family transcriptional regulator FIC domain binding interface [polypeptide binding]%3B~VbhA antitoxin and related proteins%3B cd11586%3B~XRE family transcriptional regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1713 SN35N_1714 SN35N_1714 fic fic 1805542 1806141 + cell filamentation protein Fic Fic/DOC family%3B cl00960%3B~cell filamentation protein Fic [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1714 SN35N_1715 SN35N_1715 ramR ramR 1806275 1807261 - transcription regulator%2C AraC family%2C GlcNAc-like induced AraC-like ligand binding domain%3B pfam02311%3B~bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~helix_turn_helix%2C arabinose operon control protein%3B smart00342%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C AraC family%2CGlcNAc-like in duced [Lactobacillus plantarum ZJ316] gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1715 SN35N_1716 SN35N_1716 SN35N_1716 1807395 1808672 + sugar transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~sugar transport protein [Lactobacillus plantarum JDM1] gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1716 SN35N_1717 SN35N_1717 ram2 ram2 1808702 1810279 + alpha-L-rhamnosidase alpha-L-rhamnosidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~bacterial alpha-L-rhamnosidase%3B pfam05592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1717 SN35N_1718 SN35N_1718 SN35N_1718 1810294 1811247 + sugar transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore%3B~sugar transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1718 SN35N_1719 SN35N_1719 ramP1 ramP1 1811192 1811572 + disaccharride transporter major facilitator super family disaccharride transporter%2C major facilitator super family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum WCFS1%3B~putative substrate translocation pore gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1719 SN35N_1720 SN35N_1720 ram1 ram1 1811658 1812737 + alpha-L-rhamnosidase alpha-L-rhamnosidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~bacterial alpha-L-rhamnosidase%3B pfam05592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1720 SN35N_1721 SN35N_1721 SN35N_1721 1812846 1813877 + putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1721 SN35N_1722 SN35N_1722 rhaB1 rhaB1 1813935 1814861 + RhaB1 RhaB1 [Lactobacillus plantarum ZJ316]%3B~alpha-L-rhamnosidase%3B~bacterial alpha-L-rhamnosidase%3B pfam05592%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1722 SN35N_1723 SN35N_1723 lacR lacR 1814956 1815966 - transcription regulator of beta-galactosidase gene DNA binding site [nucleotide binding]%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of DNA transcription repressor GalR which is one of two regulatory proteins involved in galactose transport and metabolism%3B cd01544%3B~organism:Lactobacillus plantarum JDM1%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcription regulator of beta-galactosidase gene [Lactobacillus plantarum JDM1]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1723 SN35N_1724 SN35N_1724 lacA lacA 1816213 1818264 + beta-galactosidase I A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain%3B cd03143%3B~beta-galactosidase C-terminal domain%3B pfam08533%3B~beta-galactosidase I [Lactobacillus plantarum WCFS1 ]%3B~beta-galactosidase [carbohydrate transport and metabolism]%3B COG1874%3B~beta-galactosidase%3B pfam02449%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1724 SN35N_1725 SN35N_1725 lacS lacS 1818283 1820229 + PTS regulated carbohydrate transporter%2C GPH family%2C lactose HPr interaction site%3B~PTS regulated carbohydrate transporter%2C GPH family%2C lactose [Lactobacillus plantarum WCFS1]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~melibiose:sodium symporter%3B provisional%3B cl15392%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphorylation site [posttranslational modification]%3B~sugar (Glycoside-pentoside-Hexuronide) transporter%3B TIGR00792 gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1725 SN35N_1726 SN35N_1726 SN35N_1726 1820373 1821764 - branched chain amino acid ABC transporter carrier protein branched chain amino acid ABC transporter carrier protein [Lactobacillus helveticus DPC 4571]%3B~branched-chain amino acid transport protein%3B cl00547%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571 gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1726 SN35N_1727 SN35N_1727 SN35N_1727 1822260 1823996 + protein kinase ABC1 family%3B cl17513%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted unusual protein kinase [general function prediction only]%3B COG0661%3B~protein kinase [Lactobacillus plantarum JDM1] gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1727 SN35N_1728 SN35N_1728 glpF6 glpF6 1824208 1824858 - MIP family major intrinsic protein channel protein Asn-Pro-Ala signature motifs%3B~MIP family major intrinsic protein channel protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~amphipathic channel%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1728 SN35N_1729 SN35N_1729 SN35N_1729 1825244 1826437 + MoxR family ATPase ATP binding site [chemical binding]%3B~ATPases associated with a variety of cellular activities%3B smart00382%3B~MoxR family ATPase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A motif%3B~walker B motif gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1729 SN35N_1730 SN35N_1730 SN35N_1730 1826455 1827792 + hypothetical protein hypothetical protein zj316_0089 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1730 SN35N_1731 SN35N_1731 SN35N_1731 1827794 1828093 + hypothetical protein hypothetical protein zj316_0088 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1731 SN35N_1732 SN35N_1732 SN35N_1732 1828221 1828808 - transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator[Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1732 SN35N_1733 SN35N_1733 SN35N_1733 1829470 1829748 + hypothetical protein hypothetical protein zj316_0086 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1733 SN35N_1734 SN35N_1734 SN35N_1734 1829745 1830317 + extracellular protein WxL domain surface cell wall-binding%3B pfam13731%3B~extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1734 SN35N_1735 SN35N_1735 SN35N_1735 1830355 1831047 + extracellular protein WxL domain surface cell wall-binding%3B pfam13731%3B~extracellular protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1735 SN35N_1736 SN35N_1736 SN35N_1736 1831145 1832158 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1736 SN35N_1737 SN35N_1737 SN35N_1737 1832180 1834330 + cell surface protein%2C CscC family WxL domain surface cell wall-binding%3B pfam13731%3B~carbohydrate binding site [chemical binding]%3B~cell surface protein%2C CscC family [Lactobacillus plantarum 16]%3B~homotetramer interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~legume lectins%3B cl14058%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum 16 gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1737 SN35N_1738 SN35N_1738 SN35N_1738 1834647 1835903 + NADH oxidase NADH oxidase [Lactobacillus reuteri TD1]%3B~coenzyme A disulfide reductase%3B reviewed%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri TD1%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1738 SN35N_1739 SN35N_1739 SN35N_1739 1835900 1836196 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1739 SN35N_1740 SN35N_1740 SN35N_1740 1836367 1836684 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340%3B~transposase [Lactobacillus plantarum 16] gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1740 SN35N_1741 SN35N_1741 SN35N_1741 1836910 1837383 - acetyltransferase%2C GNAT family acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1741 SN35N_1742 SN35N_1742 SN35N_1742 1838537 1840453 - endopeptidase PepO Zn binding site [ion binding]%3B~endopeptidase PepO [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~peptidase family M13 includes neprilysin%2C endothelin-converting enzyme I%3B cd08662%3B~predicted metalloendopeptidase [posttranslational modification%2C protein turnover%2C chaperones]%3B COG3590 gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1742 SN35N_1743 SN35N_1743 SN35N_1743 1840762 1841427 - transcription regulator%2C Crp family DNA binding site [nucleotide binding]%3B~cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [signal transduction mechanisms]%3B COG0664%3B~flexible hinge region%3B~helix_turn_helix%2C cAMP regulatory protein C-terminus%3B DNA binding domain of prokaryotic regulatory proteins belonging to the catabolite activator protein family%3B cd00092%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~non-specific DNA interactions [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative cAMP binding site [chemical binding]%3B~sequence specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Crp family [Lactobacillus plantarum ZJ316] gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1743 SN35N_1744 SN35N_1744 SN35N_1744 1841631 1841849 + MerTP family mercury (Hg2+) permease%2C binding protein MerP MerTP family mercury (Hg2+) permease%2C binding prote in MerP [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal-binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1744 SN35N_1745 SN35N_1745 SN35N_1745 1841862 1842416 + stress induced DNA binding protein DPS ferroxidase diiron center [ion binding]%3B~DPS protein%2C ferritin-like diiron-binding domain%3B cd01043%3B~dimerization interface [polypeptide binding]%3B~ferritin-like domain%3B pfam00210%3B~identified by MetaGeneAnnotator%3B putative%3B~ion pore%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~stress induced DNA binding protein[Lactobacillus plantarum subsp. plantarum ST-III] gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1745 SN35N_1746 SN35N_1746 SN35N_1746 1842545 1842748 + hypothetical protein hypothetical protein zj316_0074 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1746 SN35N_1747 SN35N_1747 SN35N_1747 1842848 1843117 - hypothetical protein hypothetical protein zj316_0073 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative allosteric switch controlling residues%3B~putative homodimer interface [polypeptide binding]%3B~putative homodimer-homodimer interface [polypeptide binding]%3B~putative homotetramer interface [polypeptide binding]%3B~putative metal binding site [ion binding]%3B~uncharacterized protein YrkD from Bacillus subtilis and related domains%3B this domain superfamily was previously known as part of DUF156%3B cd10155 gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1747 SN35N_1748 SN35N_1748 SN35N_1748 1843141 1843461 - thioredoxin catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~thioredoxin [Lactobacillus plantarum subsp. plantarum ST-III]%3B~thioredoxin-like%3B pfam13905 gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1748 SN35N_1749 SN35N_1749 SN35N_1749 1843845 1844597 + glycerol uptake facilitator related permease Asn-Pro-Ala signature motifs%3B~amphipathic channel%3B~glycerol uptake facilitator related permease (major Intrinsic protein family) [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1749 SN35N_1750 SN35N_1750 cadA2 cadA2 1844751 1846655 - cadmium transporting P-type ATPase E1-E2 ATPase%3B pfam00122%3B~cadmium transporting P-type ATPase [Lactobacillus plantarum ZJ316]%3B~heavy metal translocating P-type ATPase%3B TIGR01525%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~soluble P-type ATPase [general function prediction only] gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1750 SN35N_1751 SN35N_1751 SN35N_1751 1847605 1848576 + endoglucanase E-like protein%2C SGNH hydrolase family catalytic triad [active]%3B~endoglucanase E-like members of the SGNH hydrolase family%3B endoglucanase E catalyzes the endohydrolysis of 1%2C4-beta-glucosidic linkages in cellulose%2C lichenin and cereal beta-D-glucans%3B cd01831%3B~endoglucanase E-like protein%2C SGNH hydrolase family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~oxyanion hole [active] gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1751 SN35N_1752 SN35N_1752 SN35N_1752 1848674 1849369 - S-adenosyl-L-methionine binding protein S-adenosyl-L-methionine binding protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active] gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1752 SN35N_1753 SN35N_1753 ubiE ubiE 1849370 1850083 - menaquinone biosynthesis methyltransferase ubiE S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~menaquinone biosynthesis methyltransferase ubiE [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~ubiE/COQ5 methyltransferase family%3B pfam01209 gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1753 SN35N_1754 SN35N_1754 SN35N_1754 1850318 1851271 - iron dependent peroxidase Dyp-type peroxidase family%3B cl01067%3B~identified by MetaGeneAnnotator%3B putative%3B~iron dependent peroxidase[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1 gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1754 SN35N_1755 SN35N_1755 SN35N_1755 1851432 1852010 - transcription regulator%2C TetR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1755 SN35N_1756 SN35N_1756 SN35N_1756 1852130 1853131 + metal-dependent hydrolase%2C C-terminal domain identified by MetaGeneAnnotator%3B putative%3B~metal-dependent hydrolase%2C C-terminal domain [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted metal-dependent hydrolase of the TIM-barrel fold [general function prediction only] gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1756 SN35N_1757 SN35N_1757 ybeI ybeI 1853145 1853456 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactococcus lactis subsp. lactis CV56%3B~ybeI gene product [Lactococcus lactis subsp. lactis CV56] gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1757 SN35N_1758 SN35N_1758 SN35N_1758 1853478 1853726 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1758 SN35N_1759 SN35N_1759 SN35N_1759 1853751 1854071 + hypothetical protein hypothetical protein zj316_0062 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1759 SN35N_1760 SN35N_1760 SN35N_1760 1854401 1854772 - hypothetical protein hypothetical protein zj316_0061 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1760 SN35N_1761 SN35N_1761 SN35N_1761 1854888 1855223 + hypothetical protein hypothetical protein zj316_0060 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1761 SN35N_1762 SN35N_1762 SN35N_1762 1855549 1856616 + gamma-D-glutamate-meso-diaminopimelate muropeptidase NlpC/P60 family%3B pfam00877%3B~cell wall-associated hydrolases (invasion-associated proteins) [cell envelope biogenesis%2C outer membrane]%3B COG0791%3B~gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum JDM1 gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1762 SN35N_1763 SN35N_1763 SN35N_1763 1856748 1858157 - glutamate decarboxylase L-tyrosine decarboxylase%3B provisional%3B~catalytic residue [active]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~glutamate decarboxylase [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1763 SN35N_1764 SN35N_1764 SN35N_1764 1858324 1858521 - hypothetical protein helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cl15761%3B~hypothetical protein zj316_0057 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1764 SN35N_1765 SN35N_1765 pck pck 1858623 1860284 - phosphoenolpyruvate carboxykinase identified by MetaGeneAnnotator%3B putative%3B~nucleotide-binding site [chemical binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphoenolpyruvate carboxykinase [Lactobacillus plantarum WCFS1] gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1765 SN35N_1766 SN35N_1766 SN35N_1766 1860592 1861260 + transcription regulator%2C TetR family bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1766 SN35N_1767 SN35N_1767 SN35N_1767 1861421 1861924 + transcription regulator%2C MarR family MarR family%3B pfam12802%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1767 SN35N_1768 SN35N_1768 SN35N_1768 1862406 1863143 - transcription regulator%2C AraC family bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~helix_turn_helix%2C arabinose operon control protein%3B smart00342%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C AraC family [Lactobacillus plantarum ZJ316] gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1768 SN35N_1769 SN35N_1769 SN35N_1769 1863445 1863840 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1769 SN35N_1770 SN35N_1770 SN35N_1770 1863827 1864123 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1770 SN35N_1771 SN35N_1771 SN35N_1771 1864785 1865111 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1771 SN35N_1772 SN35N_1772 SN35N_1772 1865173 1866207 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1772 SN35N_1773 SN35N_1773 SN35N_1773 1866249 1869659 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1773 SN35N_1774 SN35N_1774 SN35N_1774 1869756 1870724 - extracellular protein COG4086 predicted secreted protein%3B~extracellular protein [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~protein of unknown function (DUF1002)%3B pfam06207 gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1774 SN35N_1775 SN35N_1775 SN35N_1775 1870973 1871296 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1775 SN35N_1776 SN35N_1776 SN35N_1776 1871328 1871900 + transcription regulator%2C TetR family bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1776 SN35N_1777 SN35N_1777 SN35N_1777 1871902 1872420 + macro domain-containing protein identified by MetaGeneAnnotator%3B putative%3B~macro domain-containing protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative ADP-ribose binding site [chemical binding]%3B~putative active site [active] gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1777 SN35N_1778 SN35N_1778 SN35N_1778 1872568 1873395 + undecaprenyl-diphosphatase bacitracin resistance protein BacA%3B cl00858%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~undecaprenyl-diphosphatase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1778 SN35N_1779 SN35N_1779 SN35N_1779 1873577 1873918 - hypothetical protein hypothetical protein zj316_0044 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1093)%3B cl02185 gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1779 SN35N_1780 SN35N_1780 SN35N_1780 1874363 1874824 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF3815)%3B pfam12821 gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1780 SN35N_1781 SN35N_1781 SN35N_1781 1874837 1875589 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF1212)%3B pfam06738%3B~uncharacterized conserved protein [function unknown] gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1781 SN35N_1782 SN35N_1782 SN35N_1782 1875730 1876590 + oxidoreductase COG0656 aldo/keto reductases%2C related to diketogulonate reductase%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~oxidoreductase [Lactobacillus amylovorus GRL 1112] gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1782 SN35N_1783 SN35N_1783 SN35N_1783 1876853 1877785 + transporter identified by MetaGeneAnnotator%3B putative%3B~membrane transport protein%3B cl09117%3B~organism:Lactobacillus plantarum WCFS1%3B~transporter [Lactobacillus plantarum WCFS1] gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1783 SN35N_1784 SN35N_1784 cpdB cpdB 1877987 1879537 - bifunctional protein: 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase%3B 3'-nucleotidase 5'-nucleotidase%2C C-terminal domain%3B pfam02872%3B~5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases [nucleotide transport and metabolism]%3B COG0737%3B~Escherichia coli CpdB and related proteins%2C N-terminal metallophosphatase domain%3B cd07410%3B~bifunctional protein: 2'%2C3'-cyclic-nucleotide 2'-ph osphodiesterase%3B 3'-nucleotidase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1784 SN35N_1785 SN35N_1785 pacL3 pacL3 1879779 1882391 + cation transporting P-type ATPase E1-E2 ATPase%3B pfam00122%3B~cation transport ATPase [inorganic ion transport and metabolism]%3B COG0474%3B~cation transporter/ATPase%2C N-terminus%3B smart00831%3B~cation transporting ATPase%2C C-terminus%3B pfam00689%3B~cation transporting P-type ATPase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative hydrolase of sodium-potassium ATPase alpha subunit%3B pfam13246 gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1785 SN35N_1786 SN35N_1786 SN35N_1786 1882479 1882952 - nucleoside 2-deoxyribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~nucleoside 2-deoxyribosyltransferase [Lactobacillus plantarum ZJ316]%3B~nucleoside 2-deoxyribosyltransferase%3B pfam05014%3B~organism:Lactobacillus plantarum ZJ316 gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1786 SN35N_1787 SN35N_1787 SN35N_1787 1884013 1884480 + hypothetical protein domain of unknown function (DUF1836)%3B pfam08876%3B~hypothetical protein zj316_0035 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1787 SN35N_1788 SN35N_1788 SN35N_1788 1884605 1885543 + cell surface hydrolase%2C membrane-bound cell surface hydrolase%2C membrane-bound [Lactobacillus plantarum ZJ316]%3B~hydrolases of the alpha/beta superfamily [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prolyl oligopeptidase family%3B pfam00326 gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1788 SN35N_1789 SN35N_1789 SN35N_1789 1885714 1886937 - multidrug resistance protein mdtG drug efflux system protein MdtG%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug resistance protein mdtG [Lactobacillus brevis KB290]%3B~organism:Lactobacillus brevis KB290%3B~putative substrate translocation pore gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1789 SN35N_1790 SN35N_1790 SN35N_1790 1887082 1888455 + purine-cytosine transport protein Na binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin%3B pfam02133%3B~purine-cytosine transport protein [Lactobacillus plantarum JDM1]%3B~solute carrier families 5 and 6-like%3B solute binding domain%3B cl00456 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1790 SN35N_1791 SN35N_1791 SN35N_1791 1888501 1888887 + hypothetical protein hypothetical protein zj316_0031 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1791 SN35N_1792 SN35N_1792 SN35N_1792 1888962 1889255 - hypothetical protein hypothetical protein zj316_0030 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1792 SN35N_1793 SN35N_1793 SN35N_1793 1889307 1889489 - hypothetical protein hypothetical protein zj316_0029 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1793 SN35N_1794 SN35N_1794 lmrB lmrB 1889725 1891158 - multidrug transport protein%2C major facilitator superfamily%2C EmrB/QacA subfamily identified by MetaGeneAnnotator%3B putative%3B~multidrug transport protein%2C major facilitator superfamily%2C EmrB/QacA subfamily [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1794 SN35N_1795 SN35N_1795 SN35N_1795 1891732 1892013 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1795 SN35N_1796 SN35N_1796 SN35N_1796 1892038 1892310 + hypothetical protein hypothetical protein zj316_0026 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1796 SN35N_1797 SN35N_1797 copR copR 1892508 1892936 + transcription regulator of CopAB ATPases copper transport repressor%2C CopY/TcrY family%3B TIGR02698%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~penicillinase repressor%3B pfam03965%3B~transcription regulator of CopAB ATPases [Lactobacillus plantarum WCFS1] gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1797 SN35N_1798 SN35N_1798 copB copB 1893256 1895295 + copper transporting ATPase E1-E2 ATPase%3B pfam00122%3B~copper transporting ATPase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~copper-(or silver)-translocating P-type ATPase%3B TIGR01511%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1798 SN35N_1799 SN35N_1799 pva2 pva2 1895392 1896378 + penicillin V acylase family protein identified by MetaGeneAnnotator%3B putative%3B~linear amide C-N hydrolases%2C choloylglycine hydrolase family%3B pfam02275%3B~organism:Lactobacillus plantarum ZJ316%3B~penicillin V acylase family protein [Lactobacillus plantarum ZJ316] gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1799 SN35N_1800 SN35N_1800 SN35N_1800 1896657 1897334 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~nodulin-21 and CCC1-related protein family%3B cd02432%3B~organism:Lactobacillus plantarum WCFS1 gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1800 SN35N_1801 SN35N_1801 SN35N_1801 1897360 1898058 + hypothetical membrane protein hypothetical membrane protein%2C DUF125 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nodulin-21 and CCC1-related protein family%3B cd02432%3B~organism:Lactobacillus plantarum ZJ316 gene gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1801 SN35N_1802 SN35N_1802 SN35N_1802 1898435 1899352 + transport protein EamA-like transporter family%3B pfam00892%3B~carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1802 SN35N_1803 SN35N_1803 SN35N_1803 1899539 1899997 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum ZJ316]%3B~acetyltransferases [general function prediction only]%3B COG0456%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1803 SN35N_1804 SN35N_1804 SN35N_1804 1900324 1900962 - short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C subgroup 6 NADH(P)-binding%3B pfam13460%3B~atypical (a) SDRs%2C subgroup 6%3B cd05267%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative NAD(P) binding site [chemical binding]%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C subgroup 6 [Lactobacillus plantarum ZJ316] gene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1804 SN35N_1805 SN35N_1805 SN35N_1805 1901127 1901270 + hypothetical protein hypothetical protein zj316_0017 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1805 SN35N_1806 SN35N_1806 SN35N_1806 1901500 1901838 + hypothetical protein hypothetical protein zj316_0016 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1806 SN35N_1807 SN35N_1807 hsp3 hsp3 1901934 1902377 + small heat shock protein identified by MetaGeneAnnotator%3B putative%3B~molecular chaperone (small heat shock protein) [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0071%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimer interface [polypeptide binding]%3B~small heat shock protein [Lactobacillus plantarum ZJ316] gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1807 SN35N_1808 SN35N_1808 SN35N_1808 1902610 1903116 + hypothetical protein hypothetical protein zj316_0014 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1808 SN35N_1809 SN35N_1809 SN35N_1809 1903151 1903516 + hypothetical protein hypothetical protein zj316_0013 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1809 SN35N_1810 SN35N_1810 mutY mutY 1903584 1904684 + A/G-specific adenine glycosylase A/G-specific DNA glycosylase [DNA replication%2C recombination%2C and repair]%3B COG1194%3B~A/G-specific adenine glycosylase [Lactobacillus plantarum ZJ316]%3B~DNA binding and oxoG recognition site [nucleotide binding]%3B~endonuclease III%3B includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)%2C alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases%3B cd00056%3B~helix-hairpin-helix signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~minor groove reading motif%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1810 SN35N_1811 SN35N_1811 SN35N_1811 1904774 1905097 + hypothetical protein hypothetical protein zj316_0011 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1811 SN35N_1812 SN35N_1812 SN35N_1812 1905367 1905741 + hypothetical protein hypothetical protein zj316_0010 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown] gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1812 SN35N_1813 SN35N_1813 nrpR4 nrpR4 1905949 1906353 + negative regulator of proteolysis ArsC family%3B pfam03960%3B~identified by MetaGeneAnnotator%3B putative%3B~negative regulator of proteolysis [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative catalytic residues [active]%3B~thiol/disulfide switch gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1813 SN35N_1814 SN35N_1814 SN35N_1814 1906524 1906943 + transcription regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulators [transcription]%3B COG1846%3B~winged helix DNA-binding domain%3B pfam13463 gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1814 SN35N_1815 SN35N_1815 SN35N_1815 1906948 1907808 + short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C TMR-like NAD(P) binding site [chemical binding]%3B~NmrA-like family%3B pfam05368%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C TMR-like [Lactobacillus plantarum WCFS1] gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1815 SN35N_1816 SN35N_1816 pgpA pgpA 1908013 1908513 - phosphatidylglycerophosphatase binuclear metal-binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphatidylglycerophosphatase A%3B a bacterial membrane-associated enzyme involved in lipid metabolism%3B cd06971%3B~phosphatidylglycerophosphatase [Lactobacillus plantarum WCFS1]%3B~tetramer interfaces [polypeptide binding] gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1816 SN35N_1817 SN35N_1817 SN35N_1817 1908724 1909617 + cell surface hydrolase%2C membrane-bound alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase%2C membrane-bound[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1817 SN35N_1818 SN35N_1818 SN35N_1818 1909905 1911287 + amino acid permease-associated protein PFAM: amino acid permease domain%3B KEGG: lfe:LAF_0745 amino acid transport protein%3B~amino acid permease-associated protein [Lactobacillus buchneri NRRL B-30929]%3B~gamma-aminobutyrate permease and related permeases [amino acid transport and metabolism]%3B COG1113%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri NRRL B-30929 gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1818 SN35N_1819 SN35N_1819 SN35N_1819 1911523 1911672 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1819 SN35N_1820 SN35N_1820 nha2 nha2 1911722 1913146 + Na(+)/H(+) antiporter Na(+)/H(+) antiporter [Lactobacillus plantarum ZJ316]%3B~Na+/H+ antiporter NhaC%3B TIGR00931%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1820 SN35N_1821 SN35N_1821 SN35N_1821 1913185 1913490 + hypothetical protein hypothetical protein zj316_0002 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1821 SN35N_1822 SN35N_1822 glmS2 glmS2 1913551 1914651 - glutamine-fructose-6-phosphate transaminase dimer interface [polypeptide binding]%3B~glutamine-fructose-6-phosphate transaminase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted phosphosugar isomerases [cell envelope biogenesis%2C outer membrane]%3B COG2222 gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1822 SN35N_1823 SN35N_1823 adeC adeC 1915279 1916970 + adenine deaminase adenine deaminase C-terminal domain%3B pfam13382%3B~adenine deaminase [Lactobacillus plantarum subsp. plantarum P-8]%3B~adenine deaminase [nucleotide transport and metabolism]%3B COG1001%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1823 SN35N_1824 SN35N_1824 SN35N_1824 1917134 1918318 - hypothetical protein hypothetical protein zj316_3158 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2325)%3B cl01811 gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1824 SN35N_1825 SN35N_1825 SN35N_1825 1918805 1919473 + hypothetical protein hypothetical protein zj316_3157 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF419)%3B cl15265 gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1825 SN35N_1826 SN35N_1826 SN35N_1826 1919617 1919796 - hypothetical protein hypothetical protein zj316_3156 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1826 SN35N_1827 SN35N_1827 SN35N_1827 1919799 1921643 - cadmium-/zinc-/cobalt-transporting ATPase E1-E2 ATPase%3B pfam00122%3B~cadmium-/zinc-/cobalt-transporting ATPase [Lactobacillus plantarum ZJ316]%3B~heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase%3B TIGR01512%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~soluble P-type ATPase [general function prediction only] gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1827 SN35N_1828 SN35N_1828 SN35N_1828 1922413 1924080 + glycine betaine/carnitine/choline transport protein BCCT family transporter%3B pfam02028%3B~glycine betaine/carnitine/choline transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1828 SN35N_1829 SN35N_1829 SN35N_1829 1925096 1925737 + lipase/esterase%2C SGNH or GDSL hydrolase family catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~lipase/esterase%2C SGNH or GDSL hydrolase family [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~oxyanion hole [active] gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1829 SN35N_1830 SN35N_1830 SN35N_1830 1925840 1926268 - hypothetical protein hypothetical protein zj316_3151 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1830 SN35N_1831 SN35N_1831 SN35N_1831 1926441 1926686 + hypothetical protein bacteriocin-protection%2C YdeI or OmpD-Associated%3B pfam13376%3B~hypothetical protein zj316_3150 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1831 SN35N_1832 SN35N_1832 SN35N_1832 1926781 1927305 - nucleotide-binding protein%2C histidine triad family HIT family signature motif%3B~catalytic residue [active]%3B~diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [nucleotide transport and metabolism / carbohydrate transport and metabolism / general function prediction only]%3B COG0537%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site/active site [active]%3B~nucleotide-binding protein%2C histidine triad family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1832 SN35N_1833 SN35N_1833 SN35N_1833 1927475 1928395 - aldo/keto reductase family protein aldo/keto reductase family protein [Lactobacillus plantarum WCFS1]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1833 SN35N_1834 SN35N_1834 yitW3 yitW3 1929456 1929767 + N-6 adenine-specific DNA methylase YitW N-6 adenine-specific DNA methylase YitW [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted metal-sulfur cluster biosynthetic enzyme [general function prediction only]%3B COG2151 gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1834 SN35N_1835 SN35N_1835 pflA pflA 1929992 1930813 - formate C-acetyltransferase activating enzyme FeS/SAM binding site%3B~formate C-acetyltransferase activating enzyme [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyruvate formate-lyase 1-activating enzyme%3B TIGR02493 gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1835 SN35N_1836 SN35N_1836 SN35N_1836 1930850 1933108 - formate acetyltransferase catalytic residues [active]%3B~coenzyme A binding site [chemical binding]%3B~formate acetyltransferase 1%3B TIGR01255%3B~formate acetyltransferase [Lactobacillus rhamnosus GG]%3B~glycine loop%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~pyruvate formate lyase 1%3B cd01678%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1836 SN35N_1837 SN35N_1837 SN35N_1837 1933526 1934515 + beta-lactamase family protein beta-lactamase class C and other penicillin binding proteins [defense mechanisms]%3B COG1680%3B~beta-lactamase family protein [Lactobacillus plantarum WCFS1]%3B~beta-lactamase%3B pfam00144%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1837 SN35N_1838 SN35N_1838 SN35N_1838 1934683 1935198 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1838 SN35N_1839 SN35N_1839 SN35N_1839 1941142 1941402 + hypothetical protein hypothetical protein zj316_3140 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1839 SN35N_1840 SN35N_1840 SN35N_1840 1941761 1943176 + multidrug transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~multidrug transport protein[Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1840 SN35N_1841 SN35N_1841 SN35N_1841 1943396 1944304 - metal ion ABC transporter%2C substrate binding protein identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metal ion ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~periplasmic solute binding protein family%3B pfam01297 gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1841 SN35N_1842 SN35N_1842 SN35N_1842 1944475 1945008 + integral membrane protein colicin V production protein%3B pfam02674%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~uncharacterized membrane protein%2C required for colicin V production [general function prediction only]%3B COG1286 gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1842 SN35N_1843 SN35N_1843 folB folB 1945233 1945601 + dihydroneopterin aldolase dihydroneopterin aldolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~dihydroneopterin aldolase%3B pfam02152%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1843 SN35N_1844 SN35N_1844 folK folK 1945591 1946103 + 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine p yrophosphokinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~ATP binding site [chemical binding]%3B~catalytic center binding site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1844 SN35N_1845 SN35N_1845 folE folE 1946096 1946665 + GTP cyclohydrolase I GTP cyclohydrolase I [Lactobacillus plantarum JDM1]%3B~GTP cyclohydrolase I%3B provisional%3B~GTP cyclohydrolase I%3B provisional%3B PRK09347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1845 SN35N_1846 SN35N_1846 SN35N_1846 1946674 1948038 + folylpolyglutamate synthase / dihydrofolate synthase Mur ligase family%2C glutamate ligase domain%3B pfam02875%3B~folylpolyglutamate synthase / dihydrofolate synthase [Lactobacillus plantarum 16]%3B~folylpolyglutamate synthase/dihydrofolate synthase%3B TIGR01499%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1846 SN35N_1847 SN35N_1847 SN35N_1847 1948035 1948622 + dihydroneopterin triphosphate pyrophosphohydrolase dihydroneopterin triphosphate pyrophosphohydrolase [Lactobacillus plantarum 16]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1847 SN35N_1848 SN35N_1848 folP folP 1948647 1949795 + dihydropteroate synthase dihydropteroate synthase [Lactobacillus plantarum ZJ316]%3B~dihydropteroate synthase%3B TIGR01496%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~inhibitor binding site%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1848 SN35N_1849 SN35N_1849 tag3 tag3 1949767 1950315 + DNA-3-methyladenine glycosylase I DNA-3-methyladenine glycosylase I [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyladenine glycosylase%3B cl01059%3B~organism:Lactobacillus plantarum ZJ316 gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1849 SN35N_1850 SN35N_1850 SN35N_1850 1950649 1950819 - hypothetical protein flagellar motor protein MotB%3B validated%3B PRK09041%3B~hypothetical protein zj316_3128 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1850 SN35N_1851 SN35N_1851 SN35N_1851 1951329 1951562 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1851 SN35N_1852 SN35N_1852 SN35N_1852 1951685 1952302 + transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1852 SN35N_1853 SN35N_1853 czcD2 czcD2 1952465 1953352 - cation (cobalt-zinc-cadmium) efflux protein Co/Zn/Cd efflux system component [inorganic ion transport and metabolism]%3B COG1230%3B~cation (cobalt-zinc-cadmium) efflux protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1853 SN35N_1854 SN35N_1854 SN35N_1854 1953491 1953835 + transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1854 SN35N_1855 SN35N_1855 hly hly 1954102 1954740 + hemolysin III channel protein%2C hemolysin III family%3B TIGR01065%3B~hemolysin III [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted membrane protein%2C hemolysin III homolog [general function prediction only] gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1855 SN35N_1856 SN35N_1856 qacH qacH 1955091 1955399 + quaternary ammonium compound-resistance protein identified by MetaGeneAnnotator%3B putative%3B~membrane transporters of cations and cationic drugs [inorganic ion transport and metabolism]%3B COG2076%3B~organism:Lactobacillus plantarum ZJ316%3B~quaternary ammonium compound-resistance protein [Lactobacillus plantarum ZJ316] gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1856 SN35N_1857 SN35N_1857 qacC qacC 1955417 1955797 + quaternary ammonium compound-resistance protein identified by MetaGeneAnnotator%3B putative%3B~membrane transporters of cations and cationic drugs [inorganic ion transport and metabolism]%3B COG2076%3B~organism:Lactobacillus plantarum ZJ316%3B~quaternary ammonium compound-resistance protein [Lactobacillus plantarum ZJ316] gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1857 SN35N_1858 SN35N_1858 SN35N_1858 1955885 1957003 - methonine synthase (cobalamine-independent)%2CC-terminal domain protein THF binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~methonine synthase (cobalamine-independent)%2CC-terminal domain protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~zinc-binding site [ion binding] gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1858 SN35N_1859 SN35N_1859 SN35N_1859 1957465 1958511 + hypothetical membrane protein hypothetical membrane protein%2C DUF20 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted permease%2C member of the PurR regulon [general function prediction only]%3B COG0628 gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1859 SN35N_1860 SN35N_1860 czcD1 czcD1 1958840 1959784 + cation (cobalt-zinc-cadmium) efflux protein cation (cobalt-zinc-cadmium) efflux protein [Lactobacillus plantarum ZJ316]%3B~cation efflux family%3B pfam01545%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted Co/Zn/Cd cation transporters [inorganic ion transport and metabolism]%3B COG0053 gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1860 SN35N_1861 SN35N_1861 kup2 kup2 1959857 1961899 - potassium uptake protein K+ potassium transporter%3B pfam02705%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~potassium uptake protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1861 SN35N_1862 SN35N_1862 SN35N_1862 1962161 1963585 - APC family amino acid-polyamine-organocation transporter APC family amino acid-polyamine-organocation transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~C-terminus of AA_permease%3B pfam13906%3B~amino acid transporter%3B TIGR00909%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1862 SN35N_1863 SN35N_1863 SN35N_1863 1964495 1964977 + extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1863 SN35N_1864 SN35N_1864 SN35N_1864 1965822 1967696 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain JDM1) gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1864 SN35N_1865 SN35N_1865 SN35N_1865 1967806 1968480 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain JDM1) gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1865 SN35N_1866 SN35N_1866 SN35N_1866 1968946 1969095 - hypothetical protein hypothetical protein zj316_3107 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1866 SN35N_1867 SN35N_1867 cls cls 1969232 1970680 + cardiolipin synthase cardiolipin synthase [Lactobacillus plantarum ZJ316]%3B~cardiolipin synthase%3B TIGR04265%3B~catalytic domain repeat 2 of bacterial cardiolipin synthase and similar proteins%3B cd09112%3B~catalytic domain%2C repeat 1%2C of bacterial cardiolipin synthase and similar proteins%3B cd09110%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phospholipase_D-nuclease N-terminal%3B pfam13396%3B~putative active site [active] gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1867 SN35N_1868 SN35N_1868 ptp2 ptp2 1970760 1971545 - protein-tyrosine phosphatase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein-tyrosine phosphatase [Lactobacillus plantarum WCFS1]%3B~tyrosine phosphatase family C-terminal region%3B pfam13348%3B~tyrosine phosphatase family%3B pfam13350 gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1868 SN35N_1869 SN35N_1869 guaC guaC 1971700 1972677 - GMP reductase GMP reductase [Staphylococcus aureus subsp. aureus ST228]%3B~guanosine 5'-monophosphate oxidoreductase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Staphylococcus aureus subsp. aureus ST228 gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1869 SN35N_1870 SN35N_1870 purA purA 1972720 1974009 - adenylosuccinate synthetase ACT binding site%3B~GDP-binding site [chemical binding]%3B~IMP binding site%3B~adenylosuccinate synthetase [Streptococcus pneumoniae G54]%3B~adenylosuccinate synthetase%3B smart00788%3B~catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae G54%3B~resistant to macrolides and tetracylcine gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1870 SN35N_1871 SN35N_1871 SN35N_1871 1974326 1975624 + adenylosuccinate lyase adenylosuccinate lyase [Lactobacillus helveticus DPC 4571]%3B~adenylosuccinate lyase%3B provisional%3B~adenylsuccinate lyase (ASL)_subgroup 1%3B cd01360%3B~catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~tetramer interface [polypeptide binding] gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1871 SN35N_1872 SN35N_1872 SN35N_1872 1975846 1976175 - bacteriocin immunity protein%2C EntA family bacteriocin immunity protein%2C EntA family [Lactobacillus plantarum WCFS1]%3B~enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1872 SN35N_1873 SN35N_1873 gshR4 gshR4 1976370 1977704 - glutathione reductase NAD(P)-binding rossmann-like domain%3B cl17500%3B~glutathione reductase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component%2C and related enzymes [energy production and conversion]%3B COG1249 gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1873 SN35N_1874 SN35N_1874 glyK glyK 1977840 1978952 + glycerate kinase glycerate kinase [Lactobacillus plantarum WCFS1]%3B~glycerate kinase [carbohydrate transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1874 SN35N_1875 SN35N_1875 SN35N_1875 1979019 1979960 - cell surface hydrolase%2C membrane-bound alpha/beta hydrolase family%3B pfam12695%3B~cell surface hydrolase%2C membrane-bound[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative lysophospholipase%3B pfam12146 gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1875 SN35N_1876 SN35N_1876 crtM crtM 1980322 1981203 - dehydrosqualene synthase active site lid residues [active]%3B~aspartate-rich region 1%3B~aspartate-rich region 2%3B~catalytic residues [active]%3B~dehydrosqualene synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding]%3B~substrate-Mg2+ binding site%3B~trans-isoprenyl diphosphate synthases%2C head-to-head%3B cd00683 gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1876 SN35N_1877 SN35N_1877 crtN crtN 1981184 1982680 - squalene synthase NAD(P)-binding rossmann-like domain%3B pfam13450%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phytoene desaturase%3B TIGR02734%3B~squalene synthase [Lactobacillus plantarum subsp. plantarum P-8] gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1877 SN35N_1878 SN35N_1878 SN35N_1878 1983287 1983985 - zinc-dependent proteinase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative neutral zinc metallopeptidase%3B pfam04298%3B~zinc-dependent proteinase [Lactobacillus plantarum ZJ316] gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1878 SN35N_1879 SN35N_1879 SN35N_1879 1984153 1984320 + hypothetical protein hypothetical protein zj316_3088 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1879 SN35N_1880 SN35N_1880 SN35N_1880 1984845 1985684 + DegV family protein DegV family protein [Lactobacillus plantarum JDM1]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1880 SN35N_1881 SN35N_1881 lrgB lrgB 1985859 1986587 + murein hydrolase regulator LrgB-like family%3B pfam04172%3B~identified by MetaGeneAnnotator%3B putative%3B~murein hydrolase regulator [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1881 SN35N_1882 SN35N_1882 lrgA lrgA 1986607 1987026 + effector of murein hydrolase LrgA family%3B pfam03788%3B~effector of murein hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1882 SN35N_1883 SN35N_1883 SN35N_1883 1987438 1987989 - acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~acetyltransferases%2C including N-acetylases of ribosomal proteins [translation%2C ribosomal structure and biogenesis]%3B COG1670%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1883 SN35N_1884 SN35N_1884 SN35N_1884 1988431 1989285 + 3%2C5-cyclic-nucleotide phosphodiesterase 3%2C5-cyclic-nucleotide phosphodiesterase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~Enterobacter aerogenes GpdQ and related proteins%2C metallophosphatase domain%3B cd07402%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~hexamer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1884 SN35N_1885 SN35N_1885 SN35N_1885 1989340 1989567 + hypothetical protein hypothetical protein zj316_3081 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1885 SN35N_1886 SN35N_1886 SN35N_1886 1989762 1990118 + bacteriocin immunity protein bacteriocin immunity protein [Lactobacillus plantarum JDM1]%3B~enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1886 SN35N_1887 SN35N_1887 fur2 fur2 1990362 1990844 - peroxide operon transcriptional regulator dimer interface [polypeptide binding]%3B~ferric uptake regulator(Fur) and related metalloregulatory proteins%3B typically iron-dependent%2C DNA-binding repressors and activators%3B cd07153%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site 1 [ion binding]%3B~metal binding site 2 [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~peroxide operon transcriptional regulator [Lactobacillus plantarum ZJ316]%3B~putative DNA binding helix%3B~structural Zn2+ binding site [ion binding] gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1887 SN35N_1888 SN35N_1888 SN35N_1888 1991034 1991633 + hypothetical protein hypothetical protein zj316_3078 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1888 SN35N_1889 SN35N_1889 SN35N_1889 1991769 1993025 - hypothetical protein hypothetical protein zj316_3077 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein containing a NRPS condensation (elongation) domain [general function prediction only] gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1889 SN35N_1890 SN35N_1890 SN35N_1890 1993176 1993355 + hypothetical protein hypothetical protein zj316_3076 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1890 SN35N_1891 SN35N_1891 SN35N_1891 1993426 1993977 + oxidoreductase NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase[Lactobacillus plantarum JDM1]%3B~predicted flavoprotein [general function prediction only] gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1891 SN35N_1892 SN35N_1892 SN35N_1892 1994012 1994269 + hypothetical protein hypothetical protein zj316_3073 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1892 SN35N_1893 SN35N_1893 nth2 nth2 1994385 1995053 + deoxyribonuclease deoxyribonuclease [Lactobacillus plantarum subsp. plantarum P-8]%3B~endonuclease III%3B includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)%2C alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases%3B cd00056%3B~endonuclease III%3B smart00478%3B~helix-hairpin-helix signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~minor groove reading motif%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding] gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1893 SN35N_1894 SN35N_1894 pts28ABC pts28ABC 1995308 1997089 + beta-glucosides PTS%2C EIIABC HPr interaction site%3B~PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~beta-glucosides PTS%2C EIIABC [Lactobacillus plantarum JDM1]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1894 SN35N_1895 SN35N_1895 pts28ABC pts28ABC 1997073 1997309 + beta-glucosides PTS%2C EIIABC beta-glucosides PTS%2C EIIABC [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1895 SN35N_1896 SN35N_1896 SN35N_1896 1997526 1998389 + oxidoreductase NADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~predicted nucleoside-diphosphate-sugar epimerases [cell envelope biogenesis%2C outer membrane / carbohydrate transport and metabolism]%3B~triphenylmethane reductase (TMR)-like proteins%2C NMRa-like%2C atypical (a) SDRs%3B cd05269 gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1896 SN35N_1897 SN35N_1897 SN35N_1897 1998483 1998941 + transcription regulator%2C MerR family DNA binding residues [nucleotide binding]%3B~MerR HTH family regulatory protein%3B pfam13411%3B~helix-turn-helix DNA binding domain of GlnR-like transcription regulators%3B cd01105%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator%2C MerR family [Lactobacillus plantarum ZJ316] gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1897 SN35N_1898 SN35N_1898 mtlR mtlR 1999300 2001204 + transcription regulator%2C mannitol operon HTH domain%3B pfam08279%3B~P-loop%3B~PRD domain%3B pfam00874%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~transcription regulator%2C mannitol operon [Lactobacillus plantarum JDM1]%3B~transcriptional antiterminator [transcription]%3B COG3711 gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1898 SN35N_1899 SN35N_1899 SN35N_1899 2001220 2001681 + PTS system%2C fructose/mannitol specific EIIA component PTS system%2C fructose/mannitol specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1899 SN35N_1900 SN35N_1900 SN35N_1900 2001698 2002018 + PTS system%2C fructose-specific EIIB component P-loop%3B~PTS system%2C fructose-specific EIIB component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1900 SN35N_1901 SN35N_1901 SN35N_1901 2002051 2003151 + phosphotransferase system fructose-specific component IIA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphotransferase system fructose-specific component IIA [Lactobacillus plantarum JDM1]%3B~phosphotransferase system%2C EIIC%3B pfam02378%3B~phosphotransferase system%2C fructose-specific IIC component [carbohydrate transport and metabolism]%3B COG1299 gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1901 SN35N_1902 SN35N_1902 SN35N_1902 2003233 2005863 + alpha-mannosidase N-terminal catalytic domain of Escherichia coli alpha-mannosidase MngB and its bacterial homologs%3B glycoside hydrolase family 38 (GH38)%3B cd10815%3B~alpha mannosidase%2C middle domain%3B cl08536%3B~alpha-mannosidase [Lactobacillus plantarum 16]%3B~alpha-mannosidase [carbohydrate transport and metabolism]%3B COG0383%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum 16 gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1902 SN35N_1903 SN35N_1903 sacK2 sacK2 2005867 2006730 + fructokinase ROK family%3B pfam00480%3B~fructokinase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]%3B COG1940 gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1903 SN35N_1904 SN35N_1904 SN35N_1904 2006903 2007727 + hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1904 SN35N_1905 SN35N_1905 SN35N_1905 2007842 2008693 - short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C TMR-like protein NADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~predicted nucleoside-diphosphate-sugar epimerases [cell envelope biogenesis%2C outer membrane / carbohydrate transport and metabolism]%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C TMR-like protein [Lactobacillus plantarum 16]%3B~triphenylmethane reductase (TMR)-like proteins%2C NMRa-like%2C atypical (a) SDRs%3B cd05269 gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1905 SN35N_1906 SN35N_1906 SN35N_1906 2009006 2009449 - hypothetical protein hypothetical protein zj316_3060 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1906 SN35N_1907 SN35N_1907 SN35N_1907 2009488 2010858 - tRNA (uracil-5-)-methyltransferase SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [translation%2C ribosomal structure and biogenesis]%3B COG2265%3B~TRAM domain%3B cl01282%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~tRNA (uracil-5-)-methyltransferase [Lactobacillus plantarum WCFS1] gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1907 SN35N_1908 SN35N_1908 SN35N_1908 2011082 2011732 + ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Leuconostoc kimchii IMSNU 11154]%3B~ABC-type uncharacterized transport system%2C ATPase component [general function prediction only]%3B~ATP binding site [chemical binding]%3B~COG4619 ABC-type uncharacterized transport system%2C ATPase component%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~first domain of the ATP-binding cassette component of cobalt transport system%3B cd03225%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc kimchii IMSNU 11154%3B~walker A/P-loop%3B~walker B gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1908 SN35N_1909 SN35N_1909 SN35N_1909 2011729 2012484 + ABC-type uncharacterized transport system%2C permease component ABC-type uncharacterized transport system%2C permease component [Leuconostoc citreum KM20]%3B~ABC-type uncharacterized transport system%2C permease component [general function prediction only]%3B~COG0390R%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc citreum KM20 gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1909 SN35N_1910 SN35N_1910 SN35N_1910 2012560 2013645 + hypothetical membrane protein hypothetical membrane protein%2C DUF218 family%2CYdcF s ubfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active] gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1910 SN35N_1911 SN35N_1911 isp2 isp2 2013934 2015664 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1911 SN35N_1912 SN35N_1912 SN35N_1912 2015717 2016718 + transcription regulator DNA binding site [nucleotide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species%3B cd06286%3B~organism:Lactobacillus plantarum JDM1%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1912 SN35N_1913 SN35N_1913 agl4 agl4 2016772 2018439 + alpha-glucosidase Ca binding site [ion binding]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~alpha-glucosidase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1913 SN35N_1914 SN35N_1914 pts24BCA pts24BCA 2018432 2020357 + sucrose PTS%2C EIIBCA HPr interaction site%3B~PTS system%2C sucrose-specific IIBC component%3B TIGR01996%3B~active site turn [active]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263%3B~sucrose PTS%2C EIIBCA [Lactobacillus plantarum JDM1] gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1914 SN35N_1915 SN35N_1915 SN35N_1915 2020443 2021378 - extracellular protein%2C membrane-anchored domain of unknown function (DUF4097)%3B pfam13349%3B~domain of unknown function (DUF4098)%3B pfam13345%3B~extracellular protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1915 SN35N_1916 SN35N_1916 SN35N_1916 2021362 2022000 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein[Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted membrane protein [function unknown] gene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1916 SN35N_1917 SN35N_1917 SN35N_1917 2021997 2022314 - PadR family transcriptional regulator PadR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted transcriptional regulators [transcription]%3B~transcriptional regulator PadR-like family%3B pfam03551 gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1917 SN35N_1918 SN35N_1918 SN35N_1918 2022676 2023251 + hypothetical protein hypothetical protein zj316_3048 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1918 SN35N_1919 SN35N_1919 SN35N_1919 2023420 2024235 - amino acid ABC superfamily ATP binding cassette transporter%2C binding protein amino acid ABC superfamily ATP binding cassette transporter%2C binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding] gene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1919 SN35N_1920 SN35N_1920 SN35N_1920 2024706 2025467 - cystine ABC transporter ATP-binding protein ABC transporter signature motif%3B~ABC-type polar amino acid transport system%2C ATPase component [amino acid transport and metabolism]%3B COG1126%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the histidine and glutamine transporters%3B cd03262%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~cystine ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1920 SN35N_1921 SN35N_1921 SN35N_1921 2025479 2026186 - cystine ABC transporter permease protein ABC-ATPase subunit interface%3B~ABC-type arginine transport system%2C permease component [amino acid transport and metabolism]%3B COG4215%3B~conserved gate region%3B~cystine ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative PBP binding loops gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1921 SN35N_1922 SN35N_1922 SN35N_1922 2026255 2027058 - amino acid ABC superfamily ATP binding cassette transporter%2C binding protein amino acid ABC superfamily ATP binding cassette transporter%2C binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding pocket [chemical binding] gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1922 SN35N_1923 SN35N_1923 SN35N_1923 2027421 2028653 - PLP-dependent aminotransferase PLP-dependent aminotransferase [Lactobacillus plantarum ZJ316]%3B~aspartate/tyrosine/aromatic aminotransferase [amino acid transport and metabolism]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1923 SN35N_1924 SN35N_1924 SN35N_1924 2028794 2029690 + transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1924 SN35N_1925 SN35N_1925 SN35N_1925 2030262 2031095 - cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1925 SN35N_1926 SN35N_1926 SN35N_1926 2031592 2034543 - membrane protein bacterial membrane protein YfhO%3B pfam09586%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1926 SN35N_1927 SN35N_1927 SN35N_1927 2035203 2036486 + CNT family concentrative nucleoside transporter CNT family concentrative nucleoside transporter [Pe diococcus acidilactici 7_4]%3B~Na+ dependent nucleoside transporter C-terminus%3B pfam07662%3B~Na+ dependent nucleoside transporter N-terminus%3B pfam01773%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoside permease [nucleotide transport and metabolism]%3B COG1972%3B~organism:Pediococcus acidilactici 7_4 gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1927 SN35N_1928 SN35N_1928 gidB gidB 2036827 2037561 + ribosomal RNA small subunit methyltransferase G S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [cell envelope biogenesis%2C outer membrane]%3B COG0357%3B~ribosomal RNA small subunit methyltransferase G [Lactobacillus plantarum subsp. plantarum P-8] gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1928 SN35N_1929 SN35N_1929 parB2 parB2 2037579 2038430 + chromosome partitioning protein%2C DNA-binding protein ParB-like nuclease domain%3B pfam02195%3B~chromosome partitioning protein%2C DNA-binding protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoid occlusion protein%3B TIGR04285%3B~organism:Lactobacillus plantarum JDM1 gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1929 SN35N_1930 SN35N_1930 SN35N_1930 2038433 2039200 + chromosome partitioning protein ParA ATPases involved in chromosome partitioning [cell division and chromosome partitioning]%3B COG1192%3B~Magnesium ion binding site [ion binding]%3B~P-loop%3B~chromosome partitioning protein ParA [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1930 SN35N_1931 SN35N_1931 parB1 parB1 2039190 2040080 + chromosome partitioning protein%2C DNA-binding protein ParB-like nuclease domain%3B smart00470%3B~ParB/RepB/Spo0J family partition protein%3B TIGR00180%3B~chromosome partitioning protein%2C DNA-binding protein [Lactobacillus plantarum JDM1]%3B~helix-turn-helix XRE-family like proteins%3B smart00530%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1931 SN35N_1932 SN35N_1932 SN35N_1932 2040105 2040296 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus H10%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1932 SN35N_1933 SN35N_1933 SN35N_1933 2040327 2041427 + GTPase G1 box%3B~G2 box%3B~G3 box%3B~G4 box%3B~G5 box%3B~GTP-binding protein YchF%3B reviewed%3B~GTP/Mg2+ binding site [chemical binding]%3B~GTPase [Lactobacillus helveticus H10]%3B~Switch I region%3B~Switch II region%3B~YchF GTPase%3B cd01900%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus H10 gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1933 SN35N_1934 SN35N_1934 SN35N_1934 2041449 2042174 + hypothetical membrane protein ABC-2 family transporter protein%3B pfam12698%3B~hypothetical membrane protein%2C DUF1129 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1129)%3B pfam06570 gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1934 SN35N_1935 SN35N_1935 SN35N_1935 2042460 2043611 + inosine-5-monophosphate dehydrogenase COG0516 IMP dehydrogenase/GMP reductase%3B~identified by MetaGeneAnnotator%3B putative%3B~inosine 5-monophosphate dehydrogenase%3B validated%3B~inosine-5-monophosphate dehydrogenase [Lactobacillus amylovorus GRL 1112]%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1935 SN35N_1936 SN35N_1936 prtM2 prtM2 2043881 2044024 + peptidyl-prolyl cis-trans isomerase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~peptidyl-prolyl cis-trans isomerase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~peptidylprolyl isomerase%3B provisional%3B PRK04405 gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1936 SN35N_1937 SN35N_1937 prsA2 prsA2 2044052 2044810 + foldase protein PrsA 2 PPIC-type PPIASE domain%3B cl08278%3B~foldase protein PrsA 2 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~peptidylprolyl isomerase%3B provisional%3B PRK04405 gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1937 SN35N_1938 SN35N_1938 SN35N_1938 2044986 2045675 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16%3B~protein of unknown function (DUF1275)%3B pfam06912 gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1938 SN35N_1939 SN35N_1939 SN35N_1939 2045766 2046455 + two-component response regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus rhamnosus GG%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~two-component response regulator [Lactobacillus rhamnosus GG] gene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1939 SN35N_1940 SN35N_1940 hpk11 hpk11 2046472 2047632 + two component system histidine protein kinase%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~signal transduction histidine kinase [signal transduction mechanisms]%3B~two component system histidine protein kinase%3B sens or protein [Lactobacillus plantarum ZJ316] gene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1940 SN35N_1941 SN35N_1941 dacA1 dacA1 2047702 2049036 + serine-type D-Ala-D-Ala carboxypeptidase D-alanyl-D-alanine carboxypeptidase [cell envelope biogenesis%2C outer membrane]%3B COG1686%3B~beta-lactamase enzyme family%3B cl17872%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~penicillin-binding protein 5%2C C-terminal domain%3B pfam07943%3B~serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum WCFS1] gene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1941 SN35N_1942 SN35N_1942 bar bar 2049622 2050119 + phosphinothricin N-acetyltransferase acetyltransferase (GNAT) family%3B pfam00583%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphinothricin N-acetyltransferase [Lactobacillus plantarum WCFS1]%3B~sortase and related acyltransferases [cell envelope biogenesis%2C outer membrane] gene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1942 SN35N_1943 SN35N_1943 SN35N_1943 2050277 2051041 + branched-chain amino acid transport protein AzlC protein%3B pfam03591%3B~branched-chain amino acid transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1943 SN35N_1944 SN35N_1944 SN35N_1944 2051062 2051412 + branched-chain amino acid transport protein branched-chain amino acid transport protein (AzlD)%3B pfam05437%3B~branched-chain amino acid transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1944 SN35N_1945 SN35N_1945 tauE2 tauE2 2051472 2052194 + sulfite export protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sulfite export protein [Lactobacillus plantarum ZJ316]%3B~sulfite exporter TauE/SafE%3B pfam01925 gene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1945 SN35N_1946 SN35N_1946 SN35N_1946 2052667 2053026 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1946 SN35N_1947 SN35N_1947 SN35N_1947 2053136 2053570 - hypothetical protein hypothetical protein zj316_3016 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1947 SN35N_1948 SN35N_1948 SN35N_1948 2053622 2054176 - extracellular protein domain of unknown function (DUF4352)%3B pfam11611%3B~extracellular protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1948 SN35N_1949 SN35N_1949 SN35N_1949 2054185 2054547 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1949 SN35N_1950 SN35N_1950 pkn2 pkn2 2054614 2055678 + serine/threonine protein kinase ATP binding site [chemical binding]%3B~activation loop (A-loop)%3B~catalytic domain of protein kinases%3B cd00180%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~serine/threonine protein kinase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~substrate binding site [chemical binding] gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1950 SN35N_1951 SN35N_1951 SN35N_1951 2055988 2056902 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1951 SN35N_1952 SN35N_1952 SN35N_1952 2056984 2058177 - cyclopropane-fatty-acyl-phospholipid synthase COG2230 cyclopropane fatty acid synthase and related methyltransferases%3B~Mycolic acid cyclopropane synthetase%3B pfam02353%3B~S-adenosylmethionine binding site [chemical binding]%3B~cyclopropane-fatty-acyl-phospholipid synthase [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1952 SN35N_1953 SN35N_1953 SN35N_1953 2058320 2059357 + cell surface protein%2C membrane-anchored cell surface protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1953 SN35N_1954 SN35N_1954 xylR xylR 2059729 2060883 + xylose operon regulator identified by MetaGeneAnnotator%3B putative%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cl17037%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]%3B COG1940%3B~xylose operon regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1954 SN35N_1955 SN35N_1955 SN35N_1955 2061031 2062113 + transport protein domain of unknown function DUF20%3B pfam01594%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted permease%2C member of the PurR regulon [general function prediction only]%3B COG0628%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1955 SN35N_1956 SN35N_1956 gpmA gpmA 2062189 2062881 + phosphoglyceromutase COG0588 phosphoglycerate mutase 1%3B~catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~phosphoglyceromutase [Lactobacillus amylovorus GRL 1112] gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1956 SN35N_1957 SN35N_1957 SN35N_1957 2063305 2064042 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus IG1 gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1957 SN35N_1958 SN35N_1958 SN35N_1958 2064075 2064326 + hypothetical protein hypothetical protein zj316_3006 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1958 SN35N_1959 SN35N_1959 SN35N_1959 2064536 2065246 + metallo-beta-lactamase domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 14869 %3D DSM 2005 4 gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1959 SN35N_1960 SN35N_1960 SN35N_1960 2065334 2065672 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1960 SN35N_1961 SN35N_1961 SN35N_1961 2066011 2067504 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fabifermentans T30PCM01 gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1961 SN35N_1962 SN35N_1962 SN35N_1962 2067520 2068128 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fabifermentans T30PCM01 gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1962 SN35N_1963 SN35N_1963 SN35N_1963 2068381 2068947 - DJ-1/PfpI family protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1963 SN35N_1964 SN35N_1964 isp2 isp2 2069098 2069934 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1964 SN35N_1965 SN35N_1965 isp2 isp2 2069817 2070758 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1] gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1965 SN35N_1966 SN35N_1966 insF_2 insF_2 2071269 2071892 - transposase insF for insertion sequence IS3 DDE domain%3B pfam13610%3B~HTH-like domain%3B pfam13276%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13683%3B~organism:Lactobacillus casei W56%3B~product derived from UniProtKB/Swiss-Prot:P0CF85%3Bgene name derived from UniProtKB/Swiss-Prot:P0CF85%3B~transposase insF for insertion sequence IS3 [Lactobacillus casei W56] gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1966 SN35N_1967 SN35N_1967 SN35N_1967 2071872 2072051 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei Lpp22 gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1967 SN35N_1968 SN35N_1968 SN35N_1968 2072165 2072416 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus casei ATCC 334%3B~transposase [Lactobacillus casei ATCC 334]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~transposase%3B pfam01527 gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1968 SN35N_1969 SN35N_1969 SN35N_1969 2072503 2072736 + transcription regulator%2C GntR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C GntR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG2188 gene gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1969 SN35N_1970 SN35N_1970 SN35N_1970 2072993 2075143 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1970 SN35N_1971 SN35N_1971 SN35N_1971 2075143 2076471 + Dnd system-associated protein 1 identified by MetaGeneAnnotator%3B putative%3B~organism:Weissella paramesenteroides ATCC 33313 gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1971 SN35N_1972 SN35N_1972 SN35N_1972 2076452 2081725 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Carnobacterium sp. WN1359 gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1972 SN35N_1973 SN35N_1973 SN35N_1973 2081928 2083193 - hypothetical membrane protein domain of unknown function (DUF4352)%3B pfam11611%3B~double zinc ribbon%3B pfam12773%3B~hypothetical membrane protein%2C DUF805 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF805)%3B pfam05656%3B~zinc-ribbon domain%3B pfam13240 gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1973 SN35N_1974 SN35N_1974 SN35N_1974 2083365 2083700 + transposase DNA-binding interface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fermentum CECT 5716%3B~transposase [Lactobacillus fermentum CECT 5716]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1974 SN35N_1975 SN35N_1975 SN35N_1975 2083650 2083928 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici DSM 20284 gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1975 SN35N_1976 SN35N_1976 SN35N_1976 2083889 2084050 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1976 SN35N_1977 SN35N_1977 SN35N_1977 2084374 2084649 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1977 SN35N_1978 SN35N_1978 SN35N_1978 2084654 2084914 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 14869 %3D DSM 2005 4 gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1978 SN35N_1979 SN35N_1979 SN35N_1979 2085071 2085448 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1979 SN35N_1980 SN35N_1980 SN35N_1980 2085474 2085731 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus IG1 gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1980 SN35N_1981 SN35N_1981 SN35N_1981 2085767 2086165 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1981 SN35N_1982 SN35N_1982 SN35N_1982 2086237 2086506 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus IG1 gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1982 SN35N_1983 SN35N_1983 SN35N_1983 2086522 2087322 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1983 SN35N_1984 SN35N_1984 SN35N_1984 2087342 2087860 + lipoprotein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus pentosus IG1 gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1984 SN35N_1985 SN35N_1985 SN35N_1985 2088004 2088438 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1985 SN35N_1986 SN35N_1986 SN35N_1986 2088606 2089232 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain JDM1) gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1986 SN35N_1987 SN35N_1987 SN35N_1987 2089225 2090355 + prophage Lp2 protein 2%2C integrase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain JDM1) gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1987 SN35N_1988 SN35N_1988 SN35N_1988 2091189 2092133 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Bacillus cereus VD169 gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1988 SN35N_1989 SN35N_1989 SN35N_1989 2092239 2093189 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1989 SN35N_1990 SN35N_1990 gpmA gpmA 2093479 2093694 + phosphoglyceromutase COG0588 phosphoglycerate mutase 1%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~phosphoglyceromutase [Lactobacillus amylovorus GRL 1112] gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1990 SN35N_1991 SN35N_1991 SN35N_1991 2093851 2094099 + hypothetical protein hypothetical protein zj316_3006 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1991 SN35N_1992 SN35N_1992 SN35N_1992 2095000 2095212 + transposase%2C fragment helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transposase%2C fragment [Lactobacillus plantarum WCFS1] gene gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1992 SN35N_1993 SN35N_1993 SN35N_1993 2095273 2095488 + transposase%2C fragment identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transposase%2C fragment [Lactobacillus plantarum WCFS1] gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1993 SN35N_1994 SN35N_1994 SN35N_1994 2095627 2095791 + transposase OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1994 SN35N_1995 SN35N_1995 SN35N_1995 2096473 2097201 - short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short-chain alcohol dehydrogenase of unknown specificity [general function prediction only]%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316] gene gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1995 SN35N_1996 SN35N_1996 SN35N_1996 2097334 2097699 + transcription regulator%2C MarR family HxlR-like helix-turn-helix%3B pfam01638%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1996 SN35N_1997 SN35N_1997 SN35N_1997 2097983 2098267 - hypothetical protein domain of unknown function (DUF1905)%3B pfam08922%3B~hypothetical protein zj316_2949 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1997 SN35N_1998 SN35N_1998 SN35N_1998 2098553 2099035 + lysozyme/muramidase%2C glycoside hydrolase family 25 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1998 SN35N_1999 SN35N_1999 SN35N_1999 2099272 2101134 + muramidase bacterial SH3 domain%3B pfam08460%3B~glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~muramidase[Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_1999 SN35N_2000 SN35N_2000 gabD gabD 2101405 2102817 - succinate-semialdehyde dehydrogenase NADP+ Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like%3B cd07100%3B~NAD(P) binding site [chemical binding]%3B~NAD-dependent aldehyde dehydrogenases [energy production and conversion]%3B COG1012%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~succinate-semialdehyde dehydrogenase NADP+ [Lactobacillus plantarum subsp. plantarum P-8] gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2000 SN35N_2001 SN35N_2001 SN35N_2001 2102857 2103771 - short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C subgroup 1 NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C subgroup 1 [Lactobacillus plantarum WCFS1] gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2001 SN35N_2002 SN35N_2002 SN35N_2002 2103921 2104487 + transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator[Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2002 SN35N_2003 SN35N_2003 SN35N_2003 2104957 2106093 + two-component system histidine protein kinase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~predicted signal transduction protein with a C-terminal ATPase domain [signal transduction mechanisms]%3B~two-component system histidine protein kinase [Lactobacillus plantarum 16] gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2003 SN35N_2004 SN35N_2004 SN35N_2004 2106098 2106844 + two-component system response regulator LytTr DNA-binding domain%3B pfam04397%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum 16%3B~phosphorylation site [posttranslational modification]%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279%3B~two-component system response regulator [Lactobacillus plantarum 16] gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2004 SN35N_2005 SN35N_2005 SN35N_2005 2106975 2107346 + putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2005 SN35N_2006 SN35N_2006 SN35N_2006 2107319 2107750 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2006 SN35N_2007 SN35N_2007 asnB2 asnB2 2108194 2109609 + asparagine synthase asparagine synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~asparagine synthase [amino acid transport and metabolism]%3B COG0367%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~molecular Tunnel%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2007 SN35N_2008 SN35N_2008 SN35N_2008 2109647 2109964 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340%3B~transposase [Lactobacillus plantarum 16] gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2008 SN35N_2009 SN35N_2009 SN35N_2009 2110135 2110431 + transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~organism:Lactobacillus buchneri NRRL B-30929%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2009 SN35N_2010 SN35N_2010 SN35N_2010 2110444 2110947 + asparagine synthase asparagine synthase [Lactobacillus plantarum 16]%3B~asparagine synthase [amino acid transport and metabolism]%3B COG0367%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2010 SN35N_2011 SN35N_2011 SN35N_2011 2111046 2111165 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2011 SN35N_2012 SN35N_2012 SN35N_2012 2111328 2111708 - cell surface protein%2C ErfK family L%2CD-transpeptidase catalytic domain%3B pfam03734%3B~cell surface protein%2C ErfK family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown]%3B COG1376 gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2012 SN35N_2013 SN35N_2013 SN35N_2013 2111674 2111925 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2013 SN35N_2014 SN35N_2014 SN35N_2014 2112239 2113444 - transport protein arabinose efflux permease [carbohydrate transport and metabolism]%3B COG2814%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2014 SN35N_2015 SN35N_2015 SN35N_2015 2113556 2113933 + transcription regulator%2C MarR family HxlR-like helix-turn-helix%3B pfam01638%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2015 SN35N_2016 SN35N_2016 SN35N_2016 2114299 2114952 + (pyro)phosphohydrolase%2C HAD superfamily (pyro)phosphohydrolase%2C HAD superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted phosphatase/phosphohexomutase [general function prediction only] gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2016 SN35N_2017 SN35N_2017 SN35N_2017 2115088 2115912 + extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2017 SN35N_2018 SN35N_2018 SN35N_2018 2116435 2119230 + cell surface protein Mycoplasma protein of unknown function%2C DUF285%3B pfam03382%3B~bacterial surface protein 26-residue repeat%3B TIGR02167%3B~cell surface protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~cell-wall surface anchor repeat%3B pfam13461%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2018 SN35N_2019 SN35N_2019 SN35N_2019 2119407 2119868 + cell surface protein%2C CscC family cell surface protein%2C CscD family%2CLPXTG-motif cell wall anchor [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2019 SN35N_2020 SN35N_2020 SN35N_2020 2119774 2120382 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2020 SN35N_2021 SN35N_2021 SN35N_2021 2120458 2121498 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2021 SN35N_2022 SN35N_2022 SN35N_2022 2121685 2122311 + hypothetical protein GyrI-like small molecule binding domain%3B cl01368%3B~hypothetical protein zj316_2928 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2022 SN35N_2023 SN35N_2023 SN35N_2023 2122407 2122802 + Fe-S cluster biosynthesis protein Fe-S cluster biosynthesis protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2023 SN35N_2024 SN35N_2024 SN35N_2024 2122827 2123795 + medium-chain degydrogenase/reductase%2C Qor family NAD(P) binding site [chemical binding]%3B~NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~identified by MetaGeneAnnotator%3B putative%3B~medium-chain degydrogenase/reductase%2C Qor family [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16%3B~zeta-crystallin with NADP-dependent quinone reductase activity (QOR)%3B cd08253 gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2024 SN35N_2025 SN35N_2025 SN35N_2025 2123876 2124025 + oxidoreductase%2C short chain dehydrogenase/reduct ase family protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 14869 %3D DSM 2005 4 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2025 SN35N_2026 SN35N_2026 SN35N_2026 2124520 2125224 + WxL domain surface protein WxL domain surface cell wall-binding%3B pfam13731%3B~WxL domain surface protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2026 SN35N_2027 SN35N_2027 SN35N_2027 2125281 2126345 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2027 SN35N_2028 SN35N_2028 SN35N_2028 2126373 2126798 + cell surface protein%2C CscC family cell surface protein%2C CscD family%2CLPXTG-motif cell wall anchor [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2028 SN35N_2029 SN35N_2029 SN35N_2029 2126791 2128278 + cell surface protein%2C CscC family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscC family [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2029 SN35N_2030 SN35N_2030 hpk9 hpk9 2128536 2129816 + two-component system histidine protein kinase%3B sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~two-component system histidine protein kinase%3B sens or protein [Lactobacillus plantarum ZJ316] gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2030 SN35N_2031 SN35N_2031 SN35N_2031 2129850 2130104 + regulator of competence TfoX TfoX C-terminal domain%3B pfam04994%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~regulator of competence TfoX [Lactobacillus plantarum ZJ316] gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2031 SN35N_2032 SN35N_2032 SN35N_2032 2130435 2131196 + transcription regulator bacterial regulatory helix-turn-helix proteins%2C AraC family%3B pfam00165%3B~helix-turn-helix domain%3B pfam12833%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum P-8] gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2032 SN35N_2033 SN35N_2033 SN35N_2033 2131330 2135403 + adherence-associated mucus-binding protein MucBP domain%3B pfam06458%3B~adherence-associated mucus-binding protein%2CLPXTG-motif cell wall anchor [Lactobacillus plantarum 16]%3B~choice-of-anchor A domain%3B TIGR04215%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2033 SN35N_2034 SN35N_2034 SN35N_2034 2135810 2136184 + copper-binding protein copper-binding protein [Lactobacillus plantarum ZJ316]%3B~cupredoxin-like domain%3B pfam13473%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2034 SN35N_2035 SN35N_2035 SN35N_2035 2136200 2136469 + copper-binding protein copper-binding protein [Lactobacillus plantarum ZJ316]%3B~cupredoxin-like domain%3B pfam13473%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2035 SN35N_2036 SN35N_2036 SN35N_2036 2136469 2138394 + copper-transporting ATPase COG2217 cation transport ATPase%3B~E1-E2 ATPase%3B pfam00122%3B~copper-(or silver)-translocating P-type ATPase%3B TIGR01511%3B~copper-transporting ATPase [Lactobacillus amylovorus GRL 1112]%3B~haloacid dehalogenase-like hydrolases%3B cl11391%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2036 SN35N_2037 SN35N_2037 SN35N_2037 2138757 2139878 + aryl-alcohol dehydrogenase NAD binding site [chemical binding]%3B~Zn-dependent alcohol dehydrogenases%2C class III [energy production and conversion]%3B COG1062%3B~aryl-alcohol dehydrogenase [Lactobacillus plantarum 16]%3B~benzyl alcohol dehydrogenase%3B cd08278%3B~catalytic Zn binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~structural Zn binding site [ion binding] gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2037 SN35N_2038 SN35N_2038 dhaT dhaT 2141064 2141894 - 1%2C3-propanediol dehydrogenase 1%2C3-propanediol dehydrogenase [Lactobacillus plantarum ZJ316]%3B~alcohol dehydrogenase%2C class IV [energy production and conversion]%3B COG1454%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1%2C2-propanediol in Escherichia coli and other enterobacteria%3B cd08176%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2038 SN35N_2039 SN35N_2039 dhaT dhaT 2141991 2142236 - 1%2C3-propanediol dehydrogenase 1%2C3-propanediol dehydrogenase [Lactobacillus plantarum ZJ316]%3B~alcohol dehydrogenase%2C class IV [energy production and conversion]%3B COG1454%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1%2C2-propanediol in Escherichia coli and other enterobacteria%3B cd08176%3B~organism:Lactobacillus plantarum ZJ316 gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2039 SN35N_2040 SN35N_2040 SN35N_2040 2142532 2142927 - extracellular transglycosylase%2C membrane-bound extracellular transglycosylase%2C membrane-bound [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2040 SN35N_2041 SN35N_2041 SN35N_2041 2143224 2144708 + amino acid transport protein amino acid transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~inner membrane transporter YjeM%3B provisional%3B~organism:Lactobacillus plantarum ZJ316 gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2041 SN35N_2042 SN35N_2042 SN35N_2042 2144835 2145656 + transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2042 SN35N_2043 SN35N_2043 SN35N_2043 2145813 2146238 + hypothetical protein hypothetical protein zj316_2908 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polyketide cyclase / dehydrase and lipid transport%3B pfam10604 gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2043 SN35N_2044 SN35N_2044 SN35N_2044 2146228 2146365 + hydrolase hydrolase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2044 SN35N_2045 SN35N_2045 SN35N_2045 2146492 2147382 + short-chain dehydrogenase/oxidoreductase%2C classical SDR family%2C subgroup 1 NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase%3B provisional%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase%2Cclassical SDR family%2C subgroup 1 [Lactobacillus plantarum ZJ316] gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2045 SN35N_2046 SN35N_2046 SN35N_2046 2147474 2148673 - metal-dependent amidase/aminoacylase/carboxypeptidase COG1473 metal-dependent amidase/aminoacylase/carboxypeptidase%3B~M20 peptidase aminoacylase 1 family%3B cd03886%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metal-dependent amidase/aminoacylase/carboxypeptidase [Lactobacillus amylovorus GRL 1112]%3B~metal-dependent amidase/aminoacylase/carboxypeptidase [general function prediction only]%3B COG1473%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2046 SN35N_2047 SN35N_2047 SN35N_2047 2148928 2149524 - extracellular zinc metalloproteinase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2047 SN35N_2048 SN35N_2048 SN35N_2048 2149964 2151688 + multidrug ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2048 SN35N_2049 SN35N_2049 SN35N_2049 2151681 2153462 + ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum JDM1]%3B~ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the bacterial lipid flippase and related proteins%2C subfamily C%3B cd03251%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2049 SN35N_2050 SN35N_2050 SN35N_2050 2153484 2154674 + ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~SpoVT / AbrB like domain%3B smart00966%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2050 SN35N_2051 SN35N_2051 SN35N_2051 2154724 2155653 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2051 SN35N_2052 SN35N_2052 SN35N_2052 2155885 2156541 - short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C subgroup 6 NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C subgroup 6 [Lactobacillus plantarum ZJ316] gene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2052 SN35N_2053 SN35N_2053 SN35N_2053 2156558 2157313 - short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short chain dehydrogenase%3B provisional%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316] gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2053 SN35N_2054 SN35N_2054 SN35N_2054 2157330 2157683 - hypothetical protein Cyclophilin-like%3B cl17583%3B~hypothetical protein zj316_2899 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2054 SN35N_2055 SN35N_2055 SN35N_2055 2157697 2158107 - hypothetical protein hypothetical protein zj316_2898 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein%2C contains double-stranded beta-helix domain [function unknown] gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2055 SN35N_2056 SN35N_2056 SN35N_2056 2158133 2158627 - phosphatidyl-ethanolamine binding protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphatidyl-ethanolamine binding protein [Lactobacillus plantarum WCFS1]%3B~phosphatidylethanolamine-binding protein domain present in bacteria and archaea%3B cd00865%3B~substrate binding site [chemical binding] gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2056 SN35N_2057 SN35N_2057 SN35N_2057 2158640 2159278 - short-chain dehydrogenase/oxidoreductase%2C atypical SDR family%2C subgroup 6 NADH(P)-binding%3B pfam13460%3B~atypical (a) SDRs%2C subgroup 6%3B cd05267%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative NAD(P) binding site [chemical binding]%3B~short-chain dehydrogenase/oxidoreductase%2Catypical SDR family%2C subgroup 6 [Lactobacillus plantarum ZJ316] gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2057 SN35N_2058 SN35N_2058 SN35N_2058 2159295 2160701 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2058 SN35N_2059 SN35N_2059 SN35N_2059 2160749 2161492 - oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~oxidoreductase [Listeria monocytogenes]%3B~short-chain alcohol dehydrogenase of unknown specificity [general function prediction only] gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2059 SN35N_2060 SN35N_2060 SN35N_2060 2161509 2161928 - extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2060 SN35N_2061 SN35N_2061 SN35N_2061 2161842 2162045 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2061 SN35N_2062 SN35N_2062 SN35N_2062 2162066 2162977 + LysR family transcriptional regulator LysR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2062 SN35N_2063 SN35N_2063 SN35N_2063 2163318 2164838 + DNA polymerase V subunit UmuC DNA binding site [nucleotide binding]%3B~DNA polymerase IV%3B reviewed%3B~DNA polymerase V%2C subunit UmuC [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~umuC subunit of DNA polymerase V%3B cd01700 gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2063 SN35N_2064 SN35N_2064 SN35N_2064 2164838 2165263 + hypothetical protein hypothetical protein zj316_2871 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2064 SN35N_2065 SN35N_2065 SN35N_2065 2165334 2166470 - diguanylate cyclase/phosphodiesterase GGDEF domain I-site%3B~c-di-GMP synthetase (diguanylate cyclase%2C GGDEF domain) [signal transduction mechanisms]%3B~diguanylate cyclase/phosphodiesterase%2C GGDEF domain [Lactobacillus plantarum WCFS1]%3B~diguanylate-cyclase (DGC) or GGDEF domain%3B cd01949%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2065 SN35N_2066 SN35N_2066 tag2 tag2 2166669 2167313 - DNA-3-methyladenine glycosylase I DNA-3-methyladenine glycosylase I [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyladenine glycosylase%3B pfam03352%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2066 SN35N_2067 SN35N_2067 SN35N_2067 2167441 2167965 - extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2067 SN35N_2068 SN35N_2068 SN35N_2068 2168080 2168973 + ABC superfamily ATP binding cassette transporter%2C binding protein ABC superfamily ATP binding cassette transporter%2C binding protein [Lactobacillus plantarum subsp. plantarum P - 8]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~periplasmic solute binding protein family%3B pfam01297 gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2068 SN35N_2069 SN35N_2069 SN35N_2069 2168959 2169306 - hypothetical protein hypothetical protein zj316_2866 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2069 SN35N_2070 SN35N_2070 SN35N_2070 2169464 2170057 + integral membrane protein SdpI/YhfL protein family%3B pfam13630%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2070 SN35N_2071 SN35N_2071 SN35N_2071 2170218 2170427 - extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transglycosylase-like domain%3B pfam06737 gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2071 SN35N_2072 SN35N_2072 SN35N_2072 2170594 2170884 - extracellular transglycosylase%2C with LysM peptidoglycan binding domain extracellular transglycosylase%2C with LysM peptidoglycan binding domain [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum WCFS1 gene gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2072 SN35N_2073 SN35N_2073 SN35N_2073 2171325 2171939 - extracellular protein catalytic residue [active]%3B~extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2073 SN35N_2074 SN35N_2074 SN35N_2074 2172323 2172766 - MerR family transcriptional regulator DNA binding residues [nucleotide binding]%3B~MerR family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding] gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2074 SN35N_2075 SN35N_2075 SN35N_2075 2172872 2173891 + NAD-dependent epimerase/dehydratase protein family NAD-dependent epimerase/dehydratase protein family [Lactobacillus plantarum ZJ316]%3B~NADP binding site [chemical binding]%3B~aldehyde reductase%2C extended (e) SDRs%3B cd05227%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoside-diphosphate-sugar epimerases [cell envelope biogenesis%2C outer membrane / carbohydrate transport and metabolism]%3B COG0451%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate binding site [chemical binding] gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2075 SN35N_2076 SN35N_2076 SN35N_2076 2174088 2175470 + beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Lactobacillus gasseri ATCC 33323]%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2076 SN35N_2077 SN35N_2077 SN35N_2077 2175470 2176942 + cellobiose-specific PTS system IIC component cellobiose phosphotransferase system IIC component%3B reviewed%3B PRK09592%3B~cellobiose-specific PTS system IIC component [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B cl00557 gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2077 SN35N_2078 SN35N_2078 SN35N_2078 2176966 2177292 + cellobiose-specific PTS system IIB component P-loop%3B~cellobiose-specific PTS system IIB component [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~phosphorylation site [posttranslational modification] gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2078 SN35N_2079 SN35N_2079 pts23A pts23A 2177746 2178192 + PTS system%2C cellobiose-specific EIIA component HPr interaction site%3B~PTS system%2C cellobiose-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification] gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2079 SN35N_2080 SN35N_2080 isp2 isp2 2178470 2179306 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2080 SN35N_2081 SN35N_2081 isp2 isp2 2179189 2180136 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1] gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2081 SN35N_2082 SN35N_2082 SN35N_2082 2180155 2180976 - transcription regulator%2C TetR family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316] gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2082 SN35N_2083 SN35N_2083 SN35N_2083 2181107 2181421 - hypothetical protein hypothetical protein zj316_2854 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2083 SN35N_2084 SN35N_2084 SN35N_2084 2181609 2182445 + metallo-phosphoesterase calcineurin-like phosphoesterase superfamily domain%3B pfam12850%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metallo-phosphoesterase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2084 SN35N_2085 SN35N_2085 SN35N_2085 2182510 2182872 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2085 SN35N_2086 SN35N_2086 SN35N_2086 2183085 2186423 + cell surface protein precursor Concanavalin A-like lectin/glucanases superfamily%3B pfam13385%3B~LPXTG-motif cell wall anchor domain%3B TIGR01167%3B~cell surface protein precursor[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2086 SN35N_2087 SN35N_2087 SN35N_2087 2186799 2188799 + ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ABC-type antimicrobial peptide transport system%2C permease component [defense mechanisms]%3B COG0577%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide%2C and cell division protein%3B cd03255%3B~D-loop%3B~FtsX-like permease family%3B pfam02687%3B~H-loop/switch region%3B~MacB-like periplasmic core domain%3B pfam12704%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2087 SN35N_2088 SN35N_2088 SN35N_2088 2189782 2190351 + integral membrane protein cadmium resistance transporter%3B pfam03596%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2088 SN35N_2089 SN35N_2089 SN35N_2089 2190375 2190689 + transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2089 SN35N_2090 SN35N_2090 SN35N_2090 2190705 2191385 + integral membrane protein SNARE associated Golgi protein%3B pfam09335%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2090 SN35N_2091 SN35N_2091 SN35N_2091 2191464 2191736 - hypothetical protein hypothetical protein zj316_2843 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2091 SN35N_2092 SN35N_2092 SN35N_2092 2191859 2192290 - nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2092 SN35N_2093 SN35N_2093 mntH2 mntH2 2192290 2193882 - manganese transport protein identified by MetaGeneAnnotator%3B putative%3B~manganese transport protein MntH%3B reviewed%3B~manganese transport protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~natural resistance-associated macrophage protein%3B pfam01566%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2093 SN35N_2094 SN35N_2094 SN35N_2094 2194212 2194883 + transcription regulator helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum JDM1%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2094 SN35N_2095 SN35N_2095 gtcA3 gtcA3 2195288 2195773 + teichoic acid glycosylation protein GtrA-like protein%3B pfam04138%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown]%3B~teichoic acid glycosylation protein [Lactobacillus plantarum ZJ316] gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2095 SN35N_2096 SN35N_2096 zmp3 zmp3 2196006 2196806 + extracellular zinc metalloproteinase extracellular zinc metalloproteinase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~zinc-dependent metalloprotease%2C MMP_like subfamily. this group contains matrix metalloproteinases (MMPs)%2C serralysins%2C and the astacin_like family of proteases%3B cd04268 gene gene2095 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2096 SN35N_2097 SN35N_2097 SN35N_2097 2196901 2197119 + hypothetical protein hypothetical protein zj316_2836 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2096 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2097 SN35N_2098 SN35N_2098 livA livA 2197688 2198881 + branched-chain amino acid ABC transporter substrate binding protein ABC-type branched-chain amino acid transport systems%2C periplasmic component [amino acid transport and metabolism]%3B COG0683%3B~branched-chain amino acid ABC transporter%2C substrat e binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative ligand binding site [chemical binding] gene gene2097 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2098 SN35N_2099 SN35N_2099 SN35N_2099 2198912 2199790 + branched-chain amino acid ABC transporter permease TM-ABC transporter signature motif%3B~branched-chain amino acid ABC transporter permease [Streptococcus pneumoniae 670-6B]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B gene gene2098 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2099 SN35N_2100 SN35N_2100 SN35N_2100 2199807 2200769 + branched-chain amino acid ABC transporter permease protein ABC-type branched-chain amino acid transport system%2C permease component [amino acid transport and metabolism]%3B COG4177%3B~TM-ABC transporter signature motif%3B~branched-chain amino acid ABC transporter%2Cpermease protein [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2099 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2100 SN35N_2101 SN35N_2101 livD livD 2200762 2201541 + branched-chain amino acid ABC transporter ATP-binding protein ABC transporter signature motif%3B~ABC-type branched-chain amino acid transport systems%2C ATPase component [amino acid transport and metabolism]%3B COG0411%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette component of branched chain amino acids transport system%3B cd03219%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~branched-chain amino acid ABC transporter%2C ATP-binding protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene2100 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2101 SN35N_2102 SN35N_2102 SN35N_2102 2201542 2202246 + high-affinity branched-chain amino acid ABC transporter ABC transporter signature motif%3B~ABC-type branched-chain amino acid transport systems%2C ATPase component [amino acid transport and metabolism]%3B COG0410%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~high-affinity branched-chain amino acid ABC transporter [Streptococcus pneumoniae 670-6B]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B%3B~walker A/P-loop%3B~walker B gene gene2101 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2102 SN35N_2103 SN35N_2103 SN35N_2103 2202249 2202884 + CBS domain protein CBS domain protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~FOG: CBS domain [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2102 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2103 SN35N_2104 SN35N_2104 SN35N_2104 2203524 2204306 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscB family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2103 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2104 SN35N_2105 SN35N_2105 SN35N_2105 2204380 2205423 + cell surface protein%2C CscA/DUF916 family bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein%2C CscA/DUF916 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene2104 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2105 SN35N_2106 SN35N_2106 SN35N_2106 2205505 2205882 + cell surface protein precursor cell surface protein precursor[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2105 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2106 SN35N_2107 SN35N_2107 SN35N_2107 2205879 2207387 + extracellular protein WxL domain surface cell wall-binding%3B pfam13731%3B~extracellular protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2106 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2107 SN35N_2108 SN35N_2108 SN35N_2108 2207829 2208794 + ABC transporter substrate-binding protein ABC transporter substrate-binding protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~periplasmic binding protein domain%3B pfam13407%3B~putative ligand binding site [chemical binding]%3B~type I periplasmic ligand-binding domain of uncharacterized ABC-type transport systems that are predicted to be involved in the uptake of amino acids%2C peptides%2C or inorganic ions%3B cd06325%3B~zinc binding site [ion binding] gene gene2107 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2108 SN35N_2109 SN35N_2109 SN35N_2109 2208812 2209813 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum WCFS1]%3B~TM-ABC transporter signature motif%3B~branched-chain amino acid transport system / permease component%3B pfam02653%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2108 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2109 SN35N_2110 SN35N_2110 SN35N_2110 2209710 2210483 + ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum WCFS1]%3B~ABC transporter signature motif%3B~ABC-type uncharacterized transport system%2C ATPase component [general function prediction only]%3B COG1101%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene2109 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2110 SN35N_2111 SN35N_2111 pts22CBA pts22CBA 2211029 2213011 - N-acetylglucosamine PTS%2C EIICBA HPr interaction site%3B~N-acetylglucosamine PTS%2C EIICBA [Lactobacillus plantarum JDM1]%3B~PTS system%2C N-acetylglucosamine-specific IIBC component%3B TIGR01998%3B~active site turn [active]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene2110 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2111 SN35N_2112 SN35N_2112 SN35N_2112 2213363 2214016 + nitroreductase FMN binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitroreductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2111 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2112 SN35N_2113 SN35N_2113 SN35N_2113 2214168 2214704 + transcription regulator helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene2112 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2113 SN35N_2114 SN35N_2114 SN35N_2114 2214733 2216490 + multidrug ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene2113 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2114 SN35N_2115 SN35N_2115 SN35N_2115 2216683 2217570 + bifunctional protein: transcription regulator%3B sugar kinase%2C ROK family bifunctional protein: transcription regulator%3B suga r kinase%2C ROK family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cd00012%3B~organism:Lactobacillus plantarum ZJ316%3B~transcriptional regulator/sugar kinase [transcription / carbohydrate transport and metabolism]%3B COG1940 gene gene2114 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2115 SN35N_2116 SN35N_2116 SN35N_2116 2217673 2217975 + transcription regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator[Lactobacillus plantarum JDM1] gene gene2115 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2116 SN35N_2117 SN35N_2117 SN35N_2117 2218058 2218678 - transcription regulator%2C TetR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C TetR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator C-terminal region%3B pfam14278%3B~transcriptional regulator [transcription]%3B COG1309 gene gene2116 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2117 SN35N_2118 SN35N_2118 SN35N_2118 2218781 2219704 + metal-dependent hydrolase amidohydrolase%3B pfam04909%3B~identified by MetaGeneAnnotator%3B putative%3B~metal-dependent hydrolase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2117 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2118 SN35N_2119 SN35N_2119 SN35N_2119 2219875 2220576 - lipase/esterase%2C subfamily of SGNH-hydrolases catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~lipase/esterase%2C subfamily of SGNH-hydrolases [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~oxyanion hole [active] gene gene2118 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2119 SN35N_2120 SN35N_2120 SN35N_2120 2220839 2221675 + transport protein EamA-like transporter family%3B pfam00892%3B~carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transport protein [Lactobacillus plantarum JDM1] gene gene2119 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2120 SN35N_2121 SN35N_2121 wapA wapA 2221811 2223664 + cell surface protein precursor%2C LPXTG-motif cell wall anchor cell surface protein precursor%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~collagen binding domain%3B pfam05737%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2120 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2121 SN35N_2122 SN35N_2122 SN35N_2122 2223712 2224641 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene2121 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2122 SN35N_2123 SN35N_2123 tanL tanL 2225035 2226444 + tannase (tannin acylhydrolase) identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~tannase (tannin acylhydrolase) [Lactobacillus plantarum WCFS1] gene gene2122 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2123 SN35N_2124 SN35N_2124 SN35N_2124 2226623 2227717 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphotransferase system%2C EIIC%3B pfam13303%3B~predicted membrane protein%2C putative toxin regulator [general function prediction only]%3B COG3641 gene gene2123 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2124 SN35N_2125 SN35N_2125 SN35N_2125 2227891 2228631 + esterase alpha/beta hydrolase family%3B pfam12697%3B~esterase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~putative lysophospholipase%3B pfam12146 gene gene2124 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2125 SN35N_2126 SN35N_2126 SN35N_2126 2228792 2229049 + bacteriocin immunity protein bacteriocin immunity protein [Lactobacillus plantarum WCFS1]%3B~enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2125 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2126 SN35N_2127 SN35N_2127 SN35N_2127 2229318 2230289 - membrane protein double zinc ribbon%3B pfam12773%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized protein family UPF0547%3B pfam10571 gene gene2126 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2127 SN35N_2128 SN35N_2128 SN35N_2128 2230308 2231756 - hypothetical protein hypothetical protein zj316_2801 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown]%3B~zinc-ribbon domain%3B pfam13248 gene gene2127 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2128 SN35N_2129 SN35N_2129 ubiD ubiD 2233106 2234578 + 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3-octaprenyl-4-hydroxybenzoate carboxy-lyase%2CUbiD f amily [Lactobacillus plantarum ZJ316]%3B~3-octaprenyl-4-hydroxybenzoate carboxy-lyase%3B pfam01977%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2128 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2129 SN35N_2130 SN35N_2130 SN35N_2130 2234715 2236094 + cation transport protein cation transport protein [Lactobacillus plantarum ZJ316]%3B~di- and tricarboxylate transporters [inorganic ion transport and metabolism]%3B COG0471%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transmembrane helices gene gene2129 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2130 SN35N_2131 SN35N_2131 SN35N_2131 2236157 2237059 - LysR family transcriptional regulator LysR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2130 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2131 SN35N_2132 SN35N_2132 SN35N_2132 2237211 2237351 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2131 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2132 SN35N_2133 SN35N_2133 SN35N_2133 2237500 2238759 + cell surface protein precursor%2C LPXTG-motif cell wall anchor cell surface protein precursor%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2132 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2133 SN35N_2134 SN35N_2134 SN35N_2134 2239072 2239269 + hypothetical protein hypothetical protein zj316_2795 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2133 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2134 SN35N_2135 SN35N_2135 dus3 dus3 2239445 2240449 + tRNA-dihydrouridine synthase FMN binding site [chemical binding]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tRNA-dihydrouridine synthase [Lactobacillus plantarum ZJ316]%3B~tRNA-dihydrouridine synthase [translation%2C ribosomal structure and biogenesis] gene gene2134 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2135 SN35N_2136 SN35N_2136 apbE2 apbE2 2240638 2241639 - thiamin biosynthesis lipoprotein ApbE ApbE family%3B pfam02424%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-associated lipoprotein involved in thiamine biosynthesis [coenzyme metabolism]%3B COG1477%3B~organism:Lactobacillus plantarum WCFS1%3B~thiamin biosynthesis lipoprotein ApbE [Lactobacillus plantarum WCFS1] gene gene2135 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2136 SN35N_2137 SN35N_2137 def2 def2 2241721 2242131 - peptide deformylase catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peptide deformylase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2136 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2137 SN35N_2138 SN35N_2138 SN35N_2138 2242274 2242747 - lipoprotein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2137 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2138 SN35N_2139 SN35N_2139 SN35N_2139 2243196 2245418 + anaerobic ribonucleoside triphosphate reductase ATP cone domain%3B pfam03477%3B~COG1328 oxygen-sensitive ribonucleoside-triphosphate reductase%3B~Zn binding site [ion binding]%3B~anaerobic ribonucleoside triphosphate reductase [Lactobacillus amylovorus GRL 1112]%3B~anaerobic ribonucleoside triphosphate reductase%3B provisional%3B~class III ribonucleotide reductase%3B cd01675%3B~effector binding site%3B~glycine loop%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2138 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2139 SN35N_2140 SN35N_2140 SN35N_2140 2245351 2245932 + anaerobic NTP reductase or activator protein 4Fe-4S single cluster domain%3B pfam13353%3B~COG0602 organic radical activating enzymes%3B~anaerobic NTP reductase or activator protein [Lactobacillus amylovorus GRL 1112]%3B~anaerobic ribonucleotide reductase-activating protein%3B provisional%3B cl15804%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2139 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2140 SN35N_2141 SN35N_2141 SN35N_2141 2246143 2246823 + diguanylate cyclase/phosphodiesterase EAL domain protein diguanylate cyclase/phosphodiesterase%2C EAL domain [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2140 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2141 SN35N_2142 SN35N_2142 SN35N_2142 2246839 2247969 + diguanylate cyclase/phosphodiesterase domain-containing protein I-site%3B~c-di-GMP synthetase (diguanylate cyclase%2C GGDEF domain) [signal transduction mechanisms]%3B~diguanylate cyclase/phosphodiesterase domain-contai ning protein [Lactobacillus plantarum JDM1]%3B~diguanylate-cyclase (DGC) or GGDEF domain%3B cd01949%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum JDM1 gene gene2141 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2142 SN35N_2143 SN35N_2143 SN35N_2143 2248414 2248947 + PTS%2C EIIA HPr interaction site%3B~PTS%2C EIIA [Lactobacillus plantarum subsp. plantarum P-8]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphorylation site [posttranslational modification] gene gene2142 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2143 SN35N_2144 SN35N_2144 SN35N_2144 2249460 2249702 + hypothetical protein cytochrome b5-like Heme/Steroid binding domain%3B cl02041%3B~hypothetical protein zj316_2785 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2143 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2144 SN35N_2145 SN35N_2145 SN35N_2145 2250092 2252593 + cell surface protein%2C LPXTG-motif cell wall anchor KxYKxGKxW signal peptide%3B TIGR03715%3B~cell surface protein%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum ZJ316]%3B~choice-of-anchor A domain%3B TIGR04215%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2144 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2145 SN35N_2146 SN35N_2146 SN35N_2146 2252976 2253695 - transcription regulator%2C GntR family DNA-binding site [nucleotide binding]%3B~UTRA domain%3B pfam07702%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C GntR family [Lactobacillus plantarum ZJ316]%3B~trehalose operon repressor%2C B. subtilis-type%3B TIGR02404%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2145 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2146 SN35N_2147 SN35N_2147 SN35N_2147 2253872 2254702 + lipase/esterase alpha/beta hydrolase fold%3B pfam07859%3B~identified by MetaGeneAnnotator%3B putative%3B~lipase/esterase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2146 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2147 SN35N_2148 SN35N_2148 npp npp 2254829 2256124 + nucleotide pyrophosphatase identified by MetaGeneAnnotator%3B putative%3B~nucleotide pyrophosphatase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~type I phosphodiesterase / nucleotide pyrophosphatase%3B pfam01663%3B~uncharacterized conserved protein [function unknown] gene gene2147 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2148 SN35N_2149 SN35N_2149 SN35N_2149 2256234 2257484 + transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~permeases of the major facilitator superfamily [general function prediction only]%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum ZJ316] gene gene2148 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2149 SN35N_2150 SN35N_2150 SN35N_2150 2257573 2258940 - amino acid transport protein amino acid transport protein [Lactobacillus plantarum JDM1]%3B~amino acid transporters [amino acid transport and metabolism]%3B COG0531%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2149 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2150 SN35N_2151 SN35N_2151 pepR2 pepR2 2259086 2259982 - prolyl aminopeptidase TAP-like protein%3B pfam08386%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~proline-specific peptidase%2C Bacillus coagulans-type subfamily%3B TIGR01250%3B~prolyl aminopeptidase [Lactobacillus plantarum JDM1] gene gene2150 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2151 SN35N_2152 SN35N_2152 ropB ropB 2260417 2261328 - TetR family transcriptional regulator TetR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene2151 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2152 SN35N_2153 SN35N_2153 SN35N_2153 2261428 2262642 + transport protein%2C major facilitator superfamily identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum WCFS1] gene gene2152 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2153 SN35N_2154 SN35N_2154 uvrA3 uvrA3 2262950 2264827 - excinuclease ABC subunit A ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~excinuclease ABC%2C subunit A [Lactobacillus plantarum subsp. plantarum P-8]%3B~excinuclease ATPase subunit [DNA replication%2C recombination%2C and repair]%3B COG0178%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene2153 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2154 SN35N_2155 SN35N_2155 SN35N_2155 2264855 2265415 - excinuclease ATPase subunit ATP binding site [chemical binding]%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~Q-loop/lid%3B~excinuclease ATPase subunit [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~walker A/P-loop gene gene2154 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2155 SN35N_2156 SN35N_2156 SN35N_2156 2265559 2267391 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein (DUF2207)%3B pfam09972 gene gene2155 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2156 SN35N_2157 SN35N_2157 SN35N_2157 2267478 2268272 + hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif I%3B~motif II%3B~organism:Lactobacillus plantarum ZJ316 gene gene2156 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2157 SN35N_2158 SN35N_2158 ybiT ybiT 2268586 2270208 + ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]%3B~ABC transporter ATP-binding protein%3B provisional%3B~ABC transporter signature motif%3B~ABC transporter%3B pfam12848%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of elongation factor 3%2C subfamily F%3B cd03221%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~walker A/P-loop%3B~walker B gene gene2157 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2158 SN35N_2159 SN35N_2159 SN35N_2159 2270303 2271508 + CAAX family membrane-bound protease CAAX family membrane-bound protease [Lactobacillus plantarum subsp. plantarum ST-III]%3B~CAAX protease self-immunity%3B pfam02517%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2158 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2159 SN35N_2160 SN35N_2160 SN35N_2160 2271976 2272806 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 4_3 gene gene2159 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2160 SN35N_2161 SN35N_2161 SN35N_2161 2272883 2273410 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferase (GNAT) domain%3B pfam13302%3B~acetyltransferase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2160 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2161 SN35N_2162 SN35N_2162 SN35N_2162 2273673 2274218 + GNAT family acetyltransferase GNAT family acetyltransferase [Lactobacillus plantarum WCFS1]%3B~acetyltransferase (GNAT) family%3B pfam00583%3B~acetyltransferases%2C including N-acetylases of ribosomal proteins [translation%2C ribosomal structure and biogenesis]%3B COG1670%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2161 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2162 SN35N_2163 SN35N_2163 endA endA 2274367 2275230 + DNA-entry nuclease DNA-entry nuclease [Lactobacillus plantarum JDM1]%3B~DNA/RNA non-specific endonuclease%3B cl17626%3B~DNA/RNA non-specific endonuclease%3B smart00892%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2162 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2163 SN35N_2164 SN35N_2164 isp2 isp2 2275770 2277473 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene2163 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2164 SN35N_2165 SN35N_2165 SN35N_2165 2277517 2277846 + transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene2164 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2165 SN35N_2166 SN35N_2166 SN35N_2166 2277945 2278499 + transcription regulator bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional regulator [transcription]%3B COG1309 gene gene2165 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2166 SN35N_2167 SN35N_2167 SN35N_2167 2278524 2281844 + membrane protein X-X-X-Leu-X-X-Gly heptad repeats%3B TIGR03057%3B~YhgE/Pip C-terminal domain%3B TIGR03062%3B~YhgE/Pip N-terminal domain%3B TIGR03061%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein [function unknown] gene gene2166 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2167 SN35N_2168 SN35N_2168 SN35N_2168 2281996 2282547 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2167 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2168 SN35N_2169 SN35N_2169 SN35N_2169 2283037 2284431 - transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene2168 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2169 SN35N_2170 SN35N_2170 SN35N_2170 2284701 2286452 + ABC transporter ATP-binding protein/permease ABC transporter ATP-binding protein/permease [Lactobacillus plantarum WCFS1]%3B~ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative multidrug transporter membrane/ATP-binding components%3B provisional%3B~walker A/P-loop%3B~walker B gene gene2169 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2170 SN35N_2171 SN35N_2171 SN35N_2171 2286452 2288239 + ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of glucan transporter and related proteins%2C subfamily C%3B cd03254%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2170 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2171 SN35N_2172 SN35N_2172 SN35N_2172 2288281 2288409 + hypothetical protein hypothetical protein zj316_2756 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2171 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2172 SN35N_2173 SN35N_2173 SN35N_2173 2288877 2289905 + oxidoreductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2172 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2173 SN35N_2174 SN35N_2174 SN35N_2174 2290008 2290874 + hypothetical protein hypothetical protein zj316_2753 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF3737)%3B pfam12541 gene gene2173 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2174 SN35N_2175 SN35N_2175 cblA2 cblA2 2290864 2292036 + cystathionine beta-lyase bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [amino acid transport and metabolism]%3B COG1168%3B~catalytic residue [active]%3B~cystathionine beta-lyase [Lactobacillus plantarum ZJ316]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene2174 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2175 SN35N_2176 SN35N_2176 SN35N_2176 2292185 2292778 + NADP oxidoreductase NADP oxidoreductase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2175 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2176 SN35N_2177 SN35N_2177 SN35N_2177 2293989 2294165 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene2176 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2177 SN35N_2178 SN35N_2178 SN35N_2178 2294549 2295232 - hydrolase%2C HAD superfamily%2C subfamily IA HAD superfamily (subfamily IA) hydrolase%2C TIGR02254%3B~hydrolase%2C HAD superfamily%2C subfamily IA [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum WCFS1 gene gene2177 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2178 SN35N_2179 SN35N_2179 maa maa 2295329 2295898 + maltose O-acetyltransferase CoA binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase [Lactobacillus plantarum WCFS1]%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Lactobacillus plantarum WCFS1%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene2178 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2179 SN35N_2180 SN35N_2180 SN35N_2180 2295970 2296413 + nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2179 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2180 SN35N_2181 SN35N_2181 SN35N_2181 2296669 2296890 + hypothetical protein antidote-toxin recognition MazE%3B cl00877%3B~hypothetical protein zj316_2745 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2180 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2181 SN35N_2182 SN35N_2182 SN35N_2182 2297096 2297992 - transcriptional regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc mesenteroides subsp. cremoris TIFN8 gene gene2181 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2182 SN35N_2183 SN35N_2183 SN35N_2183 2298113 2299042 + transporter%2C major facilitator family protein identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc mesenteroides subsp. cremoris ATCC 19254 gene gene2182 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2183 SN35N_2184 SN35N_2184 SN35N_2184 2299029 2299292 + macrolide-efflux protein COG0477 permeases of the major facilitator superfamily%3B~H+ antiporter protein%3B TIGR00900%3B~identified by MetaGeneAnnotator%3B putative%3B~macrolide-efflux protein [Leuconostoc carnosum JB16 ]%3B~organism:Leuconostoc carnosum JB16%3B~putative substrate translocation pore gene gene2183 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2184 SN35N_2185 SN35N_2185 SN35N_2185 2299879 2300517 + oxidoreductase NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2184 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2185 SN35N_2186 SN35N_2186 SN35N_2186 2300685 2301116 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene2185 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2186 SN35N_2187 SN35N_2187 SN35N_2187 2301089 2301460 - putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene2186 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2187 SN35N_2188 SN35N_2188 SN35N_2188 2301465 2302787 + transmembrane efflux protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative substrate translocation pore%3B~putative transporter%3B provisional%3B~transmembrane efflux protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2187 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2188 SN35N_2189 SN35N_2189 SN35N_2189 2302898 2303755 + 2%2C5-diketo-D-gluconate reductase 2%2C5-diketo-D-gluconate reductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2188 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2189 SN35N_2190 SN35N_2190 SN35N_2190 2303773 2304624 + oxidoreductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2189 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2190 SN35N_2191 SN35N_2191 SN35N_2191 2304643 2305386 + short-chain dehydrogenase NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain alcohol dehydrogenase of unknown specificity [general function prediction only]%3B~short-chain dehydrogenase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2190 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2191 SN35N_2192 SN35N_2192 SN35N_2192 2305790 2306134 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene2191 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2192 SN35N_2193 SN35N_2193 SN35N_2193 2306216 2306686 + twin-arginine translocation pathway signal flavodoxin-like fold%3B cl00438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~twin-arginine translocation pathway signal [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2192 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2193 SN35N_2194 SN35N_2194 SN35N_2194 2306725 2306913 + hypothetical protein hypothetical protein LPST_C2368 [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2193 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2194 SN35N_2195 SN35N_2195 SN35N_2195 2307068 2307958 - LysR family transcriptional regulator LysR family transcriptional regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2194 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2195 SN35N_2196 SN35N_2196 SN35N_2196 2308073 2308957 + organophosphate reductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~organophosphate reductase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2195 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2196 SN35N_2197 SN35N_2197 SN35N_2197 2309030 2309668 + oxidoreductase NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~oxidoreductase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2196 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2197 SN35N_2198 SN35N_2198 SN35N_2198 2309736 2310590 + glucose uptake protein glucose uptake protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sugar transport protein%3B pfam06800 gene gene2197 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2198 SN35N_2199 SN35N_2199 SN35N_2199 2311194 2311886 + glucose 1-dehydrogenase NAD binding site [chemical binding]%3B~glucose 1 dehydrogenase (GlcDH)%2C classical (c) SDRs%3B cd05358%3B~glucose 1-dehydrogenase [Pediococcus acidilactici 7 _4]%3B~glucose-1-dehydrogenase%3B provisional%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4 gene gene2198 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2199 SN35N_2200 SN35N_2200 SN35N_2200 2311961 2312650 + probable flavodoxin flavodoxin-like fold%3B cl00438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~probable flavodoxin [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2199 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2200 SN35N_2201 SN35N_2201 SN35N_2201 2312744 2313322 + ferrochelatase ferrochelatase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~protein of unknown function (DUF1211)%3B pfam06736 gene gene2200 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2201 SN35N_2202 SN35N_2202 SN35N_2202 2313336 2314187 + 2%2C5-diketo-D-gluconic acid reductase 2%2C5-diketo-D-gluconic acid reductase [Listeria monocytogenes]%3B~aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2201 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2202 SN35N_2203 SN35N_2203 SN35N_2203 2314395 2315246 + short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short chain dehydrogenase%3B provisional%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316] gene gene2202 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2203 SN35N_2204 SN35N_2204 SN35N_2204 2315267 2316235 + alcohol dehydrogenase NAD(P) binding site [chemical binding]%3B~alcohol dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~catalytic Zn binding site [ion binding]%3B~formaldehyde dehydrogenase (FDH)-like%3B cd08287%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~structural Zn binding site [ion binding]%3B~threonine dehydrogenase and related Zn-dependent dehydrogenases [amino acid transport and metabolism / general function prediction only]%3B COG1063 gene gene2203 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2204 SN35N_2205 SN35N_2205 SN35N_2205 2316244 2316840 + oxidoreductase NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase[Lactobacillus plantarum JDM1]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2204 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2205 SN35N_2206 SN35N_2206 SN35N_2206 2316889 2317776 - transposase HTH-like domain%3B pfam13276%3B~OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13333%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene2205 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2206 SN35N_2207 SN35N_2207 SN35N_2207 2317773 2318303 - transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~winged helix-turn helix%3B pfam13551 gene gene2206 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2207 SN35N_2208 SN35N_2208 SN35N_2208 2318515 2319393 + LysR family transcriptional regulator LysR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2207 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2208 SN35N_2209 SN35N_2209 SN35N_2209 2319486 2319857 + hypothetical protein hypothetical protein zj316_2740 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2208 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2209 SN35N_2210 SN35N_2210 pgm8 pgm8 2320414 2321052 + phosphoglycerate mutase family protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphoglycerate mutase family protein [Lactobacillus plantarum WCFS1] gene gene2209 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2210 SN35N_2211 SN35N_2211 SN35N_2211 2321147 2321452 + hypothetical protein hypothetical protein zj316_2737 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2210 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2211 SN35N_2212 SN35N_2212 SN35N_2212 2321487 2321738 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2211 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2212 SN35N_2213 SN35N_2213 SN35N_2213 2321735 2322232 + acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~acetyltransferases [general function prediction only]%3B COG0456%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2212 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2213 SN35N_2214 SN35N_2214 SN35N_2214 2322204 2322671 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2213 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2214 SN35N_2215 SN35N_2215 sip2 sip2 2322830 2323453 - signal peptidase I catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~signal peptidase I [Lactobacillus plantarum JDM1]%3B~signal peptidase I%2C bacterial type%3B TIGR02227 gene gene2214 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2215 SN35N_2216 SN35N_2216 sip1 sip1 2323543 2324160 - signal peptidase I PYR/PP interface [polypeptide binding]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes%3B cl11410%3B~signal peptidase I [Lactobacillus plantarum JDM1]%3B~signal peptidase I%2C bacterial type%3B TIGR02227 gene gene2215 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2216 SN35N_2217 SN35N_2217 thgA3 thgA3 2324353 2324973 + galactoside O-acetyltransferase CoA binding site [chemical binding]%3B~galactoside O-acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene2216 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2217 SN35N_2218 SN35N_2218 nth1 nth1 2325112 2325762 + endonuclease III endonuclease III [Lactobacillus plantarum ZJ316]%3B~endonuclease III%3B includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)%2C alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases%3B cd00056%3B~endonuclease III%3B smart00478%3B~helix-hairpin-helix signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~minor groove reading motif%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene2217 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2218 SN35N_2219 SN35N_2219 SN35N_2219 2325941 2326093 - hypothetical protein hypothetical protein zj316_2729 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2218 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2219 SN35N_2220 SN35N_2220 SN35N_2220 2326265 2326966 + ABC transporter ABC transporter [Enterococcus casseliflavus EC20]%3B~ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~walker A/P-loop%3B~walker B gene gene2219 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2220 SN35N_2221 SN35N_2221 SN35N_2221 2326975 2329551 + ABC superfamily ATP binding cassette transporter%2C membrane protein ABC superfamily ATP binding cassette transporter%2C m embrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ABC-type antimicrobial peptide transport system%2C permease component [defense mechanisms]%3B COG0577%3B~FtsX-like permease family%3B pfam02687%3B~MacB-like periplasmic core domain%3B pfam12704%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2220 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2221 SN35N_2222 SN35N_2222 dapE2 dapE2 2329632 2330894 + succinyl-diaminopimelate desuccinylase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like%3B cd08659%3B~succinyl-diaminopimelate desuccinylase [Lactobacillus plantarum WCFS1]%3B~succinyl-diaminopimelate desuccinylase%3B reviewed gene gene2221 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2222 SN35N_2223 SN35N_2223 SN35N_2223 2331066 2331500 - MerR family transcriptional regulator DNA binding residues [nucleotide binding]%3B~MerR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding] gene gene2222 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2223 SN35N_2224 SN35N_2224 SN35N_2224 2331673 2332071 + hypothetical protein hypothetical protein zj316_2724 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein%2C contains double-stranded beta-helix domain [function unknown] gene gene2223 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2224 SN35N_2225 SN35N_2225 SN35N_2225 2332105 2332425 + carboxymuconolactone decarboxylase carboxymuconolactone decarboxylase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~carboxymuconolactone decarboxylase family%3B cl00460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2224 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2225 SN35N_2226 SN35N_2226 SN35N_2226 2332439 2333182 + oxidoreductase NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~oxidoreductase [Listeria monocytogenes]%3B~short-chain alcohol dehydrogenase of unknown specificity [general function prediction only] gene gene2225 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2226 SN35N_2227 SN35N_2227 SN35N_2227 2333330 2334547 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC-type Na+ efflux pump%2C permease component [energy production and conversion / inorganic ion transport and metabolism]%3B COG1668%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2226 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2227 SN35N_2228 SN35N_2228 SN35N_2228 2334540 2335439 - ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum ST-I II]%3B~ABC transporter signature motif%3B~ABC-type uncharacterized transport system%2C ATPase component [general function prediction only]%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~domain of unknown function (DUF4162)%3B pfam13732%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene2227 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2228 SN35N_2229 SN35N_2229 SN35N_2229 2335845 2336018 - hypothetical protein hypothetical protein zj316_2692 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2228 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2229 SN35N_2230 SN35N_2230 ogt ogt 2336481 2336981 - methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~methylated DNA-protein cysteine methyltransferase [DNA replication%2C recombination%2C and repair]%3B COG0350%3B~methylated-DNA-[protein]-cysteine S-methyltransfera se [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2229 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2230 SN35N_2231 SN35N_2231 SN35N_2231 2337163 2338131 - LysM domain protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2230 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2231 SN35N_2232 SN35N_2232 SN35N_2232 2338784 2339392 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2231 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2232 SN35N_2233 SN35N_2233 tagE6 tagE6 2339889 2341433 + poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2232 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2233 SN35N_2234 SN35N_2234 tagE5 tagE5 2341430 2342938 + poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2233 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2234 SN35N_2235 SN35N_2235 SN35N_2235 2343023 2343850 - transcription regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcription regulator [Lactobacillus plantarum JDM1]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2234 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2235 SN35N_2236 SN35N_2236 SN35N_2236 2343967 2344977 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein [function unknown] gene gene2235 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2236 SN35N_2237 SN35N_2237 SN35N_2237 2345067 2345624 + ribosomal protein acetylating enzyme N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferase (GNAT) domain%3B pfam13302%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~ribosomal protein acetylating enzyme [Lactobacillus plantarum subsp. plantarum P-8] gene gene2236 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2237 SN35N_2238 SN35N_2238 SN35N_2238 2345683 2346183 - hypothetical protein hypothetical protein zj316_2710 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2237 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2238 SN35N_2239 SN35N_2239 SN35N_2239 2346180 2347664 - multidrug transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~multidrug transport protein [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore gene gene2238 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2239 SN35N_2240 SN35N_2240 SN35N_2240 2347878 2348540 + phosphohydrolase%2C HAD superfamily REG-2-like%2C HAD superfamily (subfamily IA) hydrolase%3B TIGR02252%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphohydrolase%2C HAD superfamily [Lactobacillus plantarum WCFS1]%3B~predicted hydrolase (HAD superfamily) [general function prediction only] gene gene2239 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2240 SN35N_2241 SN35N_2241 SN35N_2241 2348659 2349846 + MFS family major facilitator transporter MFS family major facilitator transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~arabinose efflux permease [carbohydrate transport and metabolism]%3B COG2814%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore gene gene2240 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2241 SN35N_2242 SN35N_2242 aspA aspA 2350904 2352304 + aspartate ammonia-lyase Aspartase%3B cd01357%3B~active sites [active]%3B~aspartate ammonia-lyase [Lactobacillus rhamnosus GG]%3B~aspartate ammonia-lyase%3B provisional%3B PRK12273%3B~catalyzes the formation of fumarate from aspartate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~tetramer interface [polypeptide binding] gene gene2241 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2242 SN35N_2243 SN35N_2243 mleP3 mleP3 2352567 2353493 - malate transport protein identified by MetaGeneAnnotator%3B putative%3B~malate transport protein[Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~predicted permeases [general function prediction only] gene gene2242 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2243 SN35N_2244 SN35N_2244 SN35N_2244 2353562 2353990 - sugar specific permease identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~sugar specific permease [Lactobacillus plantarum subsp. plantarum P-8] gene gene2243 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2244 SN35N_2245 SN35N_2245 SN35N_2245 2354046 2354216 + phosphopantothenoylcysteine decarboxylase/phosph opantothenate/cysteine ligase identified by MetaGeneAnnotator%3B putative%3B~organism:rhodopseudomonas palustris (strain TIE-1) gene gene2244 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2245 SN35N_2246 SN35N_2246 napA3 napA3 2354435 2355601 + Na(+)/H(+) antiporter Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B COG0475%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sodium/hydrogen exchanger family%3B pfam00999 gene gene2245 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2246 SN35N_2247 SN35N_2247 SN35N_2247 2355665 2356084 - reductase RibD C-terminal domain%3B cl17279%3B~dihydrofolate reductase [coenzyme metabolism]%3B COG0262%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~reductase[Lactobacillus plantarum subsp. plantarum ST-III] gene gene2246 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2247 SN35N_2248 SN35N_2248 SN35N_2248 2356625 2357605 + purine nucleosidase%2C inosine-uridine preferring identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~purine nucleosidase%2C inosine-uridine preferring [Lactobacillus plantarum ZJ316] gene gene2247 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2248 SN35N_2249 SN35N_2249 SN35N_2249 2357602 2358153 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF3816)%3B pfam12822 gene gene2248 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2249 SN35N_2250 SN35N_2250 SN35N_2250 2358382 2359062 - ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide%2C and cell division protein%3B cd03255%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene2249 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2250 SN35N_2251 SN35N_2251 SN35N_2251 2359077 2360144 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~MacB-like periplasmic core domain%3B pfam12704%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2250 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2251 SN35N_2252 SN35N_2252 SN35N_2252 2360317 2360820 + hypothetical membrane protein hypothetical membrane protein%2C DUF1440 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1440)%3B pfam07274 gene gene2251 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2252 SN35N_2253 SN35N_2253 SN35N_2253 2361186 2362502 + proton/sodium-glutamate symport protein Na+/H+-dicarboxylate symporters [energy production and conversion]%3B COG1301%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~proton/sodium-glutamate symport protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~sodium:dicarboxylate symporter family%3B cl00573 gene gene2252 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2253 SN35N_2254 SN35N_2254 SN35N_2254 2362698 2362949 + transcription regulator of multidrug-efflux transporter%2C MerR family DNA binding residues [nucleotide binding]%3B~MerR HTH family regulatory protein%3B pfam13411%3B~dimer interface [polypeptide binding]%3B~drug binding residues [chemical binding]%3B~helix-turn-helix DNA binding domain of the BmrR transcription regulator%3B cd01107%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator of multidrug-efflux transporter%2C MerR family [Lactobacillus plantarum ZJ316] gene gene2253 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2254 SN35N_2255 SN35N_2255 SN35N_2255 2362943 2363512 + transcription regulator of multidrug-efflux transporter GyrI-like small molecule binding domain%3B cl01368%3B~helix-turn-helix DNA binding domain of the BmrR transcription regulator%3B cd01107%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~transcription regulator of multidrug-efflux transporter [Lactobacillus plantarum JDM1] gene gene2254 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2255 SN35N_2256 SN35N_2256 SN35N_2256 2363608 2364285 + transport protein%2C DUF554 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF554)%3B pfam04474%3B~transport protein%2C DUF554 family [Lactobacillus plantarum ZJ316] gene gene2255 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2256 SN35N_2257 SN35N_2257 SN35N_2257 2364666 2364839 + hypothetical protein hypothetical protein zj316_2692 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2256 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2257 SN35N_2258 SN35N_2258 SN35N_2258 2365218 2365721 - hypothetical protein hypothetical protein zj316_2691 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1694)%3B pfam07997 gene gene2257 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2258 SN35N_2259 SN35N_2259 SN35N_2259 2366306 2367076 + extracellular protein%2C membrane-anchored extracellular protein%2C membrane-anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active] gene gene2258 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2259 SN35N_2260 SN35N_2260 SN35N_2260 2367547 2368848 + lysin glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~lysin [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2259 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2260 SN35N_2261 SN35N_2261 SN35N_2261 2368948 2369613 + extracellular protein extracellular protein [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2260 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2261 SN35N_2262 SN35N_2262 SN35N_2262 2370038 2371294 + tyrosyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~RNA binding surface [nucleotide binding]%3B~catalytic core domain of tyrosinyl-tRNA synthetase%3B cd00805%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis ATCC 367%3B~tyrosyl-tRNA synthetase [Lactobacillus brevis ATCC 367]%3B~tyrosyl-tRNA synthetase%3B provisional gene gene2261 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2262 SN35N_2263 SN35N_2263 SN35N_2263 2371438 2371944 + integral membrane protein ECF-type riboflavin transporter%2C S component%3B pfam07155%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2262 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2263 SN35N_2264 SN35N_2264 SN35N_2264 2377520 2377592 + tRNA-Thr identified by tRNAscan-SE%3B putative tRNA gene2263 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2264 SN35N_2265 SN35N_2265 SN35N_2265 2377870 2378769 - transcription regulator bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2264 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2265 SN35N_2266 SN35N_2266 SN35N_2266 2378891 2379754 + oxidoreductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1] gene gene2265 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2266 SN35N_2267 SN35N_2267 SN35N_2267 2379773 2380393 + oxidoreductase aldo/keto reductase family%3B pfam00248%3B~catalytic tetrad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1] gene gene2266 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2267 SN35N_2268 SN35N_2268 SN35N_2268 2380429 2381604 - transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase%2C mutator family%3B pfam00872 gene gene2267 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2268 SN35N_2269 SN35N_2269 SN35N_2269 2381619 2381999 + 2%2C5 diketo-D-gluconic acid-like reductase 2%2C5 diketo-D-gluconic acid-like reductase [Lactobacillus plantarum ZJ316]%3B~aldo/keto reductase family%3B pfam00248%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2268 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2269 SN35N_2270 SN35N_2270 SN35N_2270 2382115 2382291 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2269 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2270 SN35N_2271 SN35N_2271 SN35N_2271 2382229 2382684 - transcription regulator. MarR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcription regulator. MarR family [Lactobacillus plantarum WCFS1]%3B~transcriptional regulators [transcription]%3B COG1846%3B~winged helix DNA-binding domain%3B pfam13463 gene gene2270 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2271 SN35N_2272 SN35N_2272 SN35N_2272 2382975 2384411 - amino acid transport protein amino acid transport protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~inner membrane transporter YjeM%3B provisional%3B~organism:Lactobacillus plantarum JDM1 gene gene2271 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2272 SN35N_2273 SN35N_2273 aroC1 aroC1 2384628 2385377 + 3-dehydroquinate dehydratase 3-dehydroquinate dehydratase [Lactobacillus plantarum subsp. plantarum P-8]%3B~3-dehydroquinate dehydratase [amino acid transport and metabolism]%3B COG0710%3B~catalytic residue [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~type I 3-dehydroquinase%2C (3-dehydroquinate dehydratase or DHQase)%3B cd00502 gene gene2272 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2273 SN35N_2274 SN35N_2274 SN35N_2274 2385383 2385604 + hypothetical protein hypothetical protein zj316_2678 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2273 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2274 SN35N_2275 SN35N_2275 SN35N_2275 2386099 2389089 + cell surface protein%2C LPXTG-motif cell wall anchor Mycoplasma protein of unknown function%2C DUF285%3B pfam03382%3B~bacterial Ig-like domain (group 3)%3B pfam07523%3B~bacterial surface protein 26-residue repeat%3B TIGR02167%3B~cell surface protein%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~leucine rich repeat%3B pfam13855%3B~organism:Lactobacillus plantarum ZJ316 gene gene2274 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2275 SN35N_2276 SN35N_2276 SN35N_2276 2389112 2390146 + cell surface protein precursor%2C LPXTG-motif cell wall anchor KxYKxGKxW signal peptide%3B TIGR03715%3B~Mycoplasma protein of unknown function%2C DUF285%3B pfam03382%3B~bacterial surface protein 26-residue repeat%3B TIGR02167%3B~cell surface protein precursor%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2275 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2276 SN35N_2277 SN35N_2277 SN35N_2277 2390215 2391138 + transposase%2C IS30 family COG: COG2826%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus reuteri I5007%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus reuteri I5007] gene gene2276 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2277 SN35N_2278 SN35N_2278 SN35N_2278 2391246 2393288 + cell surface protein precursor%2C LPXTG-motif cell wall anchor bacterial Ig-like domain (group 3)%3B pfam07523%3B~cell surface protein precursor%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~leucine rich repeats (6 copies)%3B pfam13306%3B~organism:Lactobacillus plantarum WCFS1 gene gene2277 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2278 SN35N_2279 SN35N_2279 SN35N_2279 2393460 2393906 - flavodoxin flavodoxin [Lactobacillus plantarum ZJ316]%3B~flavodoxin-like fold%3B cl00438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2278 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2279 SN35N_2280 SN35N_2280 SN35N_2280 2394139 2396286 + hypothetical protein hypothetical protein zj316_2674 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2279 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2280 SN35N_2281 SN35N_2281 SN35N_2281 2396618 2397190 + oxidoreductase NADP oxidoreductase%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase [Lactobacillus plantarum ZJ316]%3B~predicted dinucleotide-binding enzymes [general function prediction only] gene gene2280 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2281 SN35N_2282 SN35N_2282 serA3 serA3 2397466 2398416 + phosphoglycerate dehydrogenase NAD binding site [chemical binding]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoglycerate dehydrogenase [Lactobacillus plantarum JDM1]%3B~phosphoglycerate dehydrogenase and related dehydrogenases [amino acid transport and metabolism]%3B COG0111%3B~phosphoglycerate dehydrogenase%2C 2-hydroxyacid dehydrogenase family%3B cd12155%3B~putative ligand binding site [chemical binding] gene gene2281 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2282 SN35N_2283 SN35N_2283 SN35N_2283 2398514 2399440 - DMT superfamily drug/metabolite transporter DMT superfamily drug/metabolite transporter [Lactobacillus plantarum subsp. plantarum P-8]%3B~EamA-like transporter family%3B pfam00892%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~permeases of the drug/metabolite transporter (DMT) superfamily [carbohydrate transport and metabolism / amino acid transport and metabolism / general function prediction only]%3B COG0697 gene gene2282 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2283 SN35N_2284 SN35N_2284 panE2 panE2 2399513 2400532 - 2-dehydropantoate 2-reductase 2-dehydropantoate 2-reductase [Lactobacillus plantarum JDM1]%3B~2-dehydropantoate 2-reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~ketopantoate reductase PanE/ApbA C terminal%3B pfam08546%3B~ketopantoate reductase PanE/ApbA%3B pfam02558%3B~organism:Lactobacillus plantarum JDM1 gene gene2283 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2284 SN35N_2285 SN35N_2285 SN35N_2285 2401302 2402135 + hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B cl17202%3B~haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2284 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2285 SN35N_2286 SN35N_2286 SN35N_2286 2402323 2402811 + hypothetical protein hypothetical protein zj316_2668 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2285 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2286 SN35N_2287 SN35N_2287 pgm7 pgm7 2402795 2403469 - phosphoglycerate mutase family protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoglycerate mutase family protein [Lactobacillus plantarum ZJ316] gene gene2286 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2287 SN35N_2288 SN35N_2288 SN35N_2288 2403790 2404524 - glycosyltransferase%2C family 2 glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold%3B cd00761%3B~glycosyltransferase like family 2%3B pfam13641%3B~glycosyltransferase%2C family 2 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2287 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2288 SN35N_2289 SN35N_2289 gntR gntR 2404617 2405324 - transcription regulator%2C GntR family DNA-binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain%3B smart00866%3B~transcription regulator%2C GntR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2288 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2289 SN35N_2290 SN35N_2290 SN35N_2290 2405519 2405836 + cellobiose-specific PTS system IIB component P-loop%3B~cellobiose-specific PTS system IIB component [Oenoc occus oeni PSU- 1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Oenococcus oeni PSU-1%3B~phosphorylation site [posttranslational modification] gene gene2289 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2290 SN35N_2291 SN35N_2291 celA celA 2405937 2406284 + PTS system cellobiose-specific transporter subunit IIA PTS system cellobiose-specific transporter subunit IIA [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~methionine cluster%3B~organism:Lactobacillus rhamnosus GG%3B~phosphorylation site [posttranslational modification] gene gene2290 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2291 SN35N_2292 SN35N_2292 pbg5 pbg5 2406478 2407917 + 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus plantarum WCFS1]%3B~beta-galactosidase%3B TIGR03356%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2291 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2292 SN35N_2293 SN35N_2293 SN35N_2293 2407935 2409377 + 6-phospho-beta-glucosidase 6-phospho-beta-glucosidase [Lactobacillus amylovorus GRL 1112]%3B~COG2723 beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase%3B~glycosyl hydrolase family 1%3B cl01046%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2292 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2293 SN35N_2294 SN35N_2294 dsdA dsdA 2409887 2411197 + D-serine ammonia-lyase D-serine ammonia-lyase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyridoxal 5'-phosphate binding pocket [chemical binding]%3B~pyridoxal-phosphate dependent enzyme%3B pfam00291 gene gene2293 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2294 SN35N_2295 SN35N_2295 SN35N_2295 2411417 2412160 + ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC transporter signature motif%3B~ABC transporter%2C ATP-binding subunit%2C PQQ-dependent alcohol dehydrogenase system%3B TIGR03864%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene2294 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2295 SN35N_2296 SN35N_2296 SN35N_2296 2412138 2413388 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum 16]%3B~ABC-2 type transporter%3B pfam01061%3B~ABC-type multidrug transport system%2C permease component [defense mechanisms]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2295 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2296 SN35N_2297 SN35N_2297 SN35N_2297 2413393 2414064 + TetR family transcriptional regulator TetR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulator [transcription]%3B COG1309 gene gene2296 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2297 SN35N_2298 SN35N_2298 pncB pncB 2414166 2415599 - nicotinate phosphoribosyltransferase catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate%3B~identified by MetaGeneAnnotator%3B putative%3B~nicotinate phosphoribosyltransferase [Lactobacillus rhamnosus GG]%3B~nicotinate phosphoribosyltransferase%3B validated%3B~organism:Lactobacillus rhamnosus GG gene gene2297 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2298 SN35N_2299 SN35N_2299 SN35N_2299 2415745 2416254 + transcription regulator%2C biotin repressor family 3H domain%3B pfam02829%3B~HTH domain%3B pfam08279%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted small molecule binding protein (contains 3H domain) [general function prediction only]%3B~transcription regulator%2C biotin repressor family [Lactobacillus plantarum ZJ316] gene gene2298 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2299 SN35N_2300 SN35N_2300 SN35N_2300 2416635 2417939 - transport protein%2C major facilitator superfamily H+ antiporter protein%3B TIGR00900%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum WCFS1] gene gene2299 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2300 SN35N_2301 SN35N_2301 SN35N_2301 2418829 2420010 - acetyltransferase acetyltransferase (GNAT) domain%3B pfam13527%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~sterol carrier protein domain%3B pfam13530 gene gene2300 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2301 SN35N_2302 SN35N_2302 SN35N_2302 2420038 2421129 - hypothetical protein bacterial protein of unknown function (DUF871)%3B pfam05913%3B~hypothetical protein zj316_2652 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown] gene gene2301 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2302 SN35N_2303 SN35N_2303 SN35N_2303 2421294 2421515 + hypothetical protein hypothetical protein zj316_2651 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2829)%3B pfam11195 gene gene2302 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2303 SN35N_2304 SN35N_2304 SN35N_2304 2421515 2422261 + 3-ketoacyl-ACP reductase 3-ketoacyl-(acyl-carrier-protein) reductase%3B provisional%3B PRK06550%3B~3-ketoacyl-ACP reductase [Lactobacillus rhamnosus GG]%3B~NAD(P) binding site [chemical binding]%3B~classical (c) SDRs%3B cd05233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2303 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2304 SN35N_2305 SN35N_2305 SN35N_2305 2422277 2422645 + cell-cycle regulation histidine triad protein HIT family signature motif%3B~catalytic residue [active]%3B~cell-cycle regulation histidine triad protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [nucleotide transport and metabolism / carbohydrate transport and metabolism / general function prediction only]%3B COG0537%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site/active site [active]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2304 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2305 SN35N_2306 SN35N_2306 SN35N_2306 2422661 2423227 + ADP-ribose pyrophosphatase ADP-ribose binding site [chemical binding]%3B~ADP-ribose pyrophosphatase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nudix motif%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2305 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2306 SN35N_2307 SN35N_2307 SN35N_2307 2423242 2423844 + acetyltransferase CoA binding site [chemical binding]%3B~acetyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene2306 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2307 SN35N_2308 SN35N_2308 SN35N_2308 2424022 2424657 - hypothetical protein hypothetical protein zj316_2646 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pentapeptide repeats (9 copies)%3B pfam13599 gene gene2307 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2308 SN35N_2309 SN35N_2309 SN35N_2309 2424729 2425526 - hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif I%3B~motif II%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2308 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2309 SN35N_2310 SN35N_2310 thrC thrC 2425541 2427034 - threonine synthase catalytic residue [active]%3B~catalyzes the formation of L-threonine from O-phospho-L-homoserine%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~threonine synthase [Lactobacillus plantarum JDM1]%3B~threonine synthase [amino acid transport and metabolism]%3B COG0498 gene gene2309 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2310 SN35N_2311 SN35N_2311 SN35N_2311 2427178 2428902 + maltogenic alpha-amylase N-terminal Early set domain associated with the catalytic domain of cyclomaltodextrinase and pullulan-degrading enzymes%3B cd02857%3B~alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins%3B cd11338%3B~catalytic site [active]%3B~glycosidases [carbohydrate transport and metabolism]%3B COG0366%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltogenic alpha-amylase [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene2310 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2311 SN35N_2312 SN35N_2312 SN35N_2312 2429171 2429488 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2311 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2312 SN35N_2313 SN35N_2313 SN35N_2313 2429681 2430319 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2312 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2313 SN35N_2314 SN35N_2314 SN35N_2314 2430528 2431028 + NUDIX family hydrolase NUDIX family hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2313 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2314 SN35N_2315 SN35N_2315 SN35N_2315 2431356 2432552 + bifunctional cystathionine gamma-lyase/maltose regulon repressor bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [amino acid transport and metabolism]%3B COG1168%3B~bifunctional cystathionine gamma-lyase/maltose regulon repressor [Lactobacillus plantarum subsp. plantarum P- 8]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene2314 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2315 SN35N_2316 SN35N_2316 SN35N_2316 2432588 2432770 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene2315 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2316 SN35N_2317 SN35N_2317 SN35N_2317 2432921 2433247 - hypothetical protein hypothetical protein zj316_2638 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2316 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2317 SN35N_2318 SN35N_2318 SN35N_2318 2433424 2433897 + hypothetical protein hypothetical protein zj316_2637 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2317 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2318 SN35N_2319 SN35N_2319 gtcA2 gtcA2 2434037 2434453 - teichoic acid glycosylation protein GtrA-like protein%3B pfam04138%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown]%3B~teichoic acid glycosylation protein [Lactobacillus plantarum ZJ316] gene gene2318 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2319 SN35N_2320 SN35N_2320 SN35N_2320 2434531 2434767 - Na+/H+ ion antiporter Na+/H+ ion antiporter [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2319 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2320 SN35N_2321 SN35N_2321 SN35N_2321 2434972 2435442 + nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2320 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2321 SN35N_2322 SN35N_2322 SN35N_2322 2435558 2436367 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2321 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2322 SN35N_2323 SN35N_2323 SN35N_2323 2436357 2437235 - ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene2322 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2323 SN35N_2324 SN35N_2324 SN35N_2324 2437232 2437603 - transcription regulator%2C GntR family DNA-binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C GntR family [Lactobacillus plantarum ZJ316]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2323 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2324 SN35N_2325 SN35N_2325 SN35N_2325 2437631 2437906 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2324 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2325 SN35N_2326 SN35N_2326 SN35N_2326 2437929 2439710 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~FtsX-like permease family%3B pfam02687%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2325 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2326 SN35N_2327 SN35N_2327 SN35N_2327 2439741 2440499 - peptide ABC transporter ATPase ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~peptide ABC transporter ATPase [Lactobacillus gasseri ATCC 33323]%3B~walker A/P-loop%3B~walker B gene gene2326 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2327 SN35N_2328 SN35N_2328 SN35N_2328 2441001 2441975 + L-asparaginase L-asparaginase [Lactobacillus plantarum ZJ316]%3B~homodimer interface [polypeptide binding]%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~type II (periplasmic) bacterial L-asparaginase%3B cd08964 gene gene2327 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2328 SN35N_2329 SN35N_2329 SN35N_2329 2442153 2442962 - cell surface hydrolase%2C membrane-bound alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase%2C membrane-bound[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2328 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2329 SN35N_2330 SN35N_2330 cah cah 2442985 2443620 - carbonate dehydratase carbonate dehydratase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc binding site [ion binding] gene gene2329 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2330 SN35N_2331 SN35N_2331 ptp3 ptp3 2443918 2444709 + protein-tyrosine phosphatase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein-tyrosine phosphatase [Lactobacillus plantarum ZJ316]%3B~tyrosine phosphatase family C-terminal region%3B pfam13348%3B~tyrosine phosphatase family%3B pfam13350 gene gene2330 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2331 SN35N_2332 SN35N_2332 SN35N_2332 2444721 2445731 + lipoate-protein ligase bacterial lipoate protein ligase C-terminus%3B pfam10437%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoate-protein ligase A [coenzyme metabolism]%3B COG0095%3B~lipoate-protein ligase [Lactobacillus plantarum 16]%3B~lipoyltransferase and lipoate-protein ligase%3B TIGR00545%3B~organism:Lactobacillus plantarum 16 gene gene2331 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2332 SN35N_2333 SN35N_2333 SN35N_2333 2445962 2446570 + oxidoreductase NADPH-dependent FMN reductase%3B pfam03358%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~oxidoreductase [Enterococcus casseliflavus EC20]%3B~predicted flavoprotein [general function prediction only] gene gene2332 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2333 SN35N_2334 SN35N_2334 SN35N_2334 2446585 2447880 + NADPH-dependent FMN reductase family protein NADPH-dependent FMN reductase family protein [Lactobacillus plantarum ZJ316]%3B~NADPH-dependent FMN reductase%3B pfam03358%3B~PAS domain%3B pfam13596%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted flavoprotein [general function prediction only] gene gene2333 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2334 SN35N_2335 SN35N_2335 purE purE 2448450 2448932 + N5-carboxyaminoimidazole ribonucleotide mutase AIR carboxylase%3B pfam00731%3B~N5-carboxyaminoimidazole ribonucleotide mutase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2334 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2335 SN35N_2336 SN35N_2336 purK1 purK1 2448916 2450046 + phosphoribosylaminoimidazole carboxylase ATPase subunit ATP-grasp domain%3B pfam02222%3B~NAD binding site [chemical binding]%3B~formate/glycerate dehydrogenases%2C D-specific 2-hydroxy acid dehydrogenases and related dehydrogenases%3B cl17240%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosylaminoimidazole carboxylase ATPase subunit%3B~phosphoribosylaminoimidazole carboxylase ATPase subunit [Lactobacillus plantarum subsp. plantarum P-8] gene gene2335 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2336 SN35N_2337 SN35N_2337 purC purC 2450049 2450780 + phosphoribosylaminoimidazole-succinocarboxamide synthase ATP binding site [chemical binding]%3B~bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide (SAICAR) synthase%3B cd01415%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosylaminoimidazole-succinocarboxamide synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~phosphoribosylaminoimidazole-succinocarboxamide synthase%3B reviewed%3B~substrate binding site [chemical binding] gene gene2336 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2337 SN35N_2338 SN35N_2338 purS purS 2450782 2451036 + phosphoribosylformylglycinamidine synthase PurS component identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoribosylformylglycinamidine (FGAM) synthase%3B pfam02700%3B~phosphoribosylformylglycinamidine synthase%2CPurS com ponent [Lactobacillus plantarum ZJ316] gene gene2337 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2338 SN35N_2339 SN35N_2339 SN35N_2339 2451036 2451716 + phosphoribosylformylglycinamidine synthase catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphoribosylformylglycinamidine synthase I%3B provisional%3B~phosphoribosylformylglycinamidine synthase [Listeria monocytogenes]%3B~putative active site [active]%3B~type 1 glutamine amidotransferase (GATase1)-like domain found in formylglycinamide ribonucleotide amidotransferase%3B cd01740 gene gene2338 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2339 SN35N_2340 SN35N_2340 SN35N_2340 2451709 2453928 + phosphoribosylformylglycinamidine synthase ATP binding site [chemical binding]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~phosphoribosylformylglycinamidine synthase II%3B provisional%3B~phosphoribosylformylglycinamidine synthase [Listeria monocytogenes] gene gene2339 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2340 SN35N_2341 SN35N_2341 purF purF 2453913 2455367 + glutamine phosphoribosylpyrophosphate amidotransferase amidophosphoribosyltransferase%3B provisional%3B~glutamine phosphoribosylpyrophosphate amidotransferase [Bifidobacterium longum DJO10A]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Bifidobacterium longum DJO10A%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~tetramer interface [polypeptide binding] gene gene2340 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2341 SN35N_2342 SN35N_2342 purM purM 2455364 2456389 + phosphoribosylformylglycinamidine cyclo-ligase dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoribosylaminoimidazole synthetase%3B provisional%3B~phosphoribosylformylglycinamidine cyclo-ligase [Lactobacillus plantarum ZJ316]%3B~putative ATP binding site [chemical binding] gene gene2341 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2342 SN35N_2343 SN35N_2343 purN purN 2456382 2456960 + phosphoribosylglycinamide formyltransferase catalytic site [active]%3B~cosubstrate binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosylglycinamide formyltransferase (GAR transformylase%2C GART)%3B cd08645%3B~phosphoribosylglycinamide formyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~phosphoribosylglycinamide formyltransferase%3B reviewed%3B PRK05647%3B~substrate binding site [chemical binding] gene gene2342 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2343 SN35N_2344 SN35N_2344 SN35N_2344 2456962 2458494 + bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase AICARFT/IMPCHase bienzyme%3B cl03362%3B~COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)%3B~bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Lactobacillus amylovorus GRL 1112]%3B~bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase%3B provisional%3B PRK00881%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~purine monophosphate binding site [chemical binding]%3B~putative catalytic residues [active] gene gene2343 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2344 SN35N_2345 SN35N_2345 purD purD 2458514 2459755 + phosphoribosylamine-glycine ligase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphoribosylamine--glycine ligase%3B provisional%3B~phosphoribosylamine-glycine ligase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~phosphoribosylglycinamide synthetase%2C ATP-grasp (A) domain%3B pfam01071%3B~phosphoribosylglycinamide synthetase%2C C domain%3B pfam02843%3B~phosphoribosylglycinamide synthetase%2C N domain%3B pfam02844 gene gene2344 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2345 SN35N_2346 SN35N_2346 SN35N_2346 2459934 2460602 + methionine synthase family protein identified by MetaGeneAnnotator%3B putative%3B~methionine synthase (cobalamine-independent) family protein [Lactobacillus plantarum 16]%3B~organism:Lactobacillus plantarum 16 gene gene2345 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2346 SN35N_2347 SN35N_2347 ica3 ica3 2460781 2462109 - glycosyltransferase CESA_like is the cellulose synthase superfamily%3B cd06423%3B~DXD motif%3B~N-glycosyltransferase%3B provisional%3B~glycosyltransferase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2346 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2347 SN35N_2348 SN35N_2348 SN35N_2348 2462122 2462640 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2347 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2348 SN35N_2349 SN35N_2349 SN35N_2349 2462633 2463049 - diguanylate cyclase/phosphodiesterase EAL domain protein EAL domain%3B pfam00563%3B~diguanylate cyclase/phosphodiesterase%2C EAL domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2348 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2349 SN35N_2350 SN35N_2350 SN35N_2350 2463116 2463457 - diguanylate cyclase/phosphodiesterase EAL domain protein EAL domain%3B pfam00563%3B~diguanylate cyclase/phosphodiesterase%2C EAL domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2349 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2350 SN35N_2351 SN35N_2351 SN35N_2351 2463768 2464670 + hypothetical protein NAD(P) binding site [chemical binding]%3B~hypothetical protein zj316_2605 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted nucleoside-diphosphate-sugar epimerases [cell envelope biogenesis%2C outer membrane / carbohydrate transport and metabolism]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2350 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2351 SN35N_2352 SN35N_2352 SN35N_2352 2464768 2465940 - guanine permease derived by automated computational analysis using gene prediction method: protein homology.%3B~guanine permease [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~xanthine/uracil/vitamin C permease [nucleotide transport and metabolism] gene gene2351 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2352 SN35N_2353 SN35N_2353 SN35N_2353 2466421 2467761 - NCS2 family nucleobase:cation symporter-2 NCS2 family nucleobase:cation symporter-2 [Pediococcus acidilactici 7_4]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici 7_4%3B~xanthine permease%3B TIGR03173 gene gene2352 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2353 SN35N_2354 SN35N_2354 pucR pucR 2468021 2469610 - purine transport regulator PucR C-terminal helix-turn-helix domain%3B pfam13556%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~purine catabolism regulatory protein-like family%3B pfam07905%3B~purine transport regulator [Lactobacillus plantarum ZJ316]%3B~regulator of polyketide synthase expression [signal transduction mechanisms / secondary metabolites biosynthesis%2C transport%2C and catabolism] gene gene2353 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2354 SN35N_2355 SN35N_2355 SN35N_2355 2470562 2471104 + uracil phosphoribosyltransferase / pyrimidine operon regulatory protein PyrR identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus acidophilus La-14%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~pyrimidine operon attenuation protein/uracil phosphoribosyltransferase [nucleotide transport and metabolism]%3B COG2065%3B~uracil phosphoribosyltransferase / pyrimidine operon regulatory protein PyrR [Lactobacillus acidophilus La- 1 4] gene gene2354 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2355 SN35N_2356 SN35N_2356 pyrB pyrB 2471251 2472186 + aspartate carbamoyltransferase aspartate carbamoyltransferase [Lactobacillus plantarum ZJ316]%3B~aspartate carbamoyltransferase catalytic subunit%3B provisional%3B PRK00856%3B~aspartate/ornithine carbamoyltransferase%2C Asp/Orn binding domain%3B pfam00185%3B~aspartate/ornithine carbamoyltransferase%2C carbamoyl-P binding domain%3B pfam02729%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2355 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2356 SN35N_2357 SN35N_2357 pyrC pyrC 2472190 2473482 + dihydroorotase dihydroorotase [Lactobacillus plantarum WCFS1]%3B~dihydroorotase%3B validated%3B PRK09357%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2356 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2357 SN35N_2358 SN35N_2358 pyrAA pyrAA 2473479 2474573 + carbamoyl-phosphate synthase pyrimidine-specific small chain carbamoyl phosphate synthase small subunit%3B reviewed%3B~carbamoyl-phosphate synthase pyrimidine-specific small chain [Lactobacillus plantarum ZJ316]%3B~carbamoyl-phosphate synthase small chain%2C CPSase domain%3B smart01097%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~small chain of the glutamine-dependent form of carbamoyl phosphate synthase%2C CPSase II%3B cd01744%3B~subunit interface [polypeptide binding] gene gene2357 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2358 SN35N_2359 SN35N_2359 carB carB 2474566 2477742 + carbamoyl phosphate synthase large subunit ATP-grasp domain%3B cl17255%3B~IMP binding site%3B~carbamoyl phosphate synthase large subunit [Streptococcus pneumoniae G54]%3B~carbamoyl phosphate synthase large subunit%3B reviewed%3B PRK05294%3B~carbamoyl-phosphate synthase L chain%2C ATP binding domain%3B pfam02786%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~carbamoyl-phosphate synthetase large chain%2C oligomerisation domain%3B pfam02787%3B~dimer interface [polypeptide binding]%3B~four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity%3B~identified by MetaGeneAnnotator%3B putative%3B~interdomain contacts%3B~organism:Streptococcus pneumoniae G54%3B~partial ornithine binding site%3B~resistant to macrolides and tetracylcine gene gene2358 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2359 SN35N_2360 SN35N_2360 pyrD pyrD 2477785 2478702 + dihydroorotate dehydrogenase FMN binding site [chemical binding]%3B~dihydroorotate dehydrogenase (subfamily 1) family protein%3B TIGR01037%3B~dihydroorotate dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8]%3B~heterodimer interface [polypeptide binding]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~substrate binding site [chemical binding] gene gene2359 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2360 SN35N_2361 SN35N_2361 pyrF pyrF 2478699 2479412 + orotidine 5'-phosphate decarboxylase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~orotidine 5'-phosphate decarboxylase [Lactobacillus plantarum JDM1]%3B~type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase gene gene2360 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2361 SN35N_2362 SN35N_2362 SN35N_2362 2479414 2480052 + orotate phosphoribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~orotate phosphoribosyltransferase [Lactobacillus rhamnosus GG]%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2361 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2362 SN35N_2363 SN35N_2363 oroP oroP 2480209 2481177 + orotate transport protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~orotate transport protein [Lactobacillus plantarum WCFS1]%3B~protein of unknown function%2C DUF606%3B pfam04657 gene gene2362 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2363 SN35N_2364 SN35N_2364 rexB rexB 2481575 2485177 + ATP-dependent helicase/deoxyribonuclease subunit B ATP-dependent helicase/deoxyribonuclease subunit B [Lactobacillus plantarum ZJ316]%3B~PD-(D/E)XK nuclease superfamily%3B pfam12705%3B~helicase-exonuclease AddAB%2C AddB subunit%3B TIGR02773%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2363 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2364 SN35N_2365 SN35N_2365 rexA rexA 2485170 2488919 + ATP-dependent nuclease subunit A ATP-dependent nuclease subunit A [Lactobacillus plantarum WCFS1]%3B~PD-(D/E)XK nuclease superfamily%3B pfam12705%3B~family description%3B pfam13538%3B~helicase-exonuclease AddAB%2C AddA subunit%2C Firmicutes type%3B TIGR02785%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~part of AAA domain%3B pfam13245 gene gene2364 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2365 SN35N_2366 SN35N_2366 SN35N_2366 2489052 2489576 - acetyltransferase acetyltransferase (GNAT) domain%3B pfam13523%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2365 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2366 SN35N_2367 SN35N_2367 SN35N_2367 2489713 2490354 + short-chain dehydrogenase%2C atypical SDR family%2C subgroup 5 NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~atypical (a) SDRs%2C subgroup 5%3B cd05243%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active]%3B~short-chain dehydrogenase%2C atypical SDR family%2Csubg roup 5 [Lactobacillus plantarum ZJ316] gene gene2366 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2367 SN35N_2368 SN35N_2368 SN35N_2368 2490513 2491409 - transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cl11398%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene2367 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2368 SN35N_2369 SN35N_2369 SN35N_2369 2491536 2492309 + transport protein hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~sulfite exporter TauE/SafE%3B pfam01925%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene2368 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2369 SN35N_2370 SN35N_2370 dapA2 dapA2 2492759 2493628 - dihydrodipicolinate synthase catalytic residue [active]%3B~dihydrodipicolinate synthase (DHDPS)%3B cd00950%3B~dihydrodipicolinate synthase [Lactobacillus plantarum subsp. plantarum P-8]%3B~dihydrodipicolinate synthase%3B TIGR00674%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2369 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2370 SN35N_2371 SN35N_2371 araT2 araT2 2493633 2494802 - aromatic amino acid specific aminotransferase aromatic amino acid aminotransferase%3B validated%3B~aromatic amino acid specific aminotransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene2370 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2371 SN35N_2372 SN35N_2372 SN35N_2372 2494903 2496012 + aminotransferase with N-terminal regulator domain DNA-binding site [nucleotide binding]%3B~aminotransferase with N-terminal regulator domain [Lactobacillus plantarum WCFS1]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2371 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2372 SN35N_2373 SN35N_2373 gpd gpd 2496490 2497974 - glucose-6-phosphate 1-dehydrogenase glucose-6-phosphate 1-dehydrogenase [Lactobacillus plantarum subsp. plantarum P-8]%3B~glucose-6-phosphate 1-dehydrogenase%3B validated%3B~glucose-6-phosphate dehydrogenase%2C C-terminal domain%3B pfam02781%3B~glucose-6-phosphate dehydrogenase%2C NAD binding domain%3B pfam00479%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2372 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2373 SN35N_2374 SN35N_2374 SN35N_2374 2498092 2498439 - integral membrane protein SdpI/YhfL protein family%3B pfam13630%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2373 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2374 SN35N_2375 SN35N_2375 SN35N_2375 2498847 2499791 - oxidoreductase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases%3B cd05289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1]%3B~putative NAD(P) binding site [chemical binding] gene gene2374 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2375 SN35N_2376 SN35N_2376 SN35N_2376 2499878 2500255 - transcription regulator%2C MerR family DNA binding residues [nucleotide binding]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator%2C MerR family [Lactobacillus plantarum ZJ316] gene gene2375 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2376 SN35N_2377 SN35N_2377 SN35N_2377 2500587 2501750 + major facilitator superfamily multidrug transporter identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily multidrug transporter [Lactobacillus plantarum JDM1]%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore gene gene2376 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2377 SN35N_2378 SN35N_2378 nhaP3 nhaP3 2501908 2503500 + Na(+)/H(+) antiporter Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B cl10482%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum ZJ316]%3B~NhaP-type Na+/H+ and K+/H+ antiporters [inorganic ion transport and metabolism]%3B COG0025%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2377 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2378 SN35N_2379 SN35N_2379 nrdI nrdI 2503608 2504093 - ribonucleotide reductase protein NrdI flavoprotein NrdI%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribonucleotide reductase protein NrdI [Lactobacillus plantarum ZJ316] gene gene2378 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2379 SN35N_2380 SN35N_2380 SN35N_2380 2504068 2504211 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2379 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2380 SN35N_2381 SN35N_2381 SN35N_2381 2504401 2505768 - transport protein with CBS domains domain of unknown function DUF21%3B pfam01595%3B~hemolysins and related proteins containing CBS domains [general function prediction only]%3B COG1253%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transport protein with CBS domains [Lactobacillus plantarum WCFS1]%3B~transporter associated domain%3B smart01091 gene gene2380 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2381 SN35N_2382 SN35N_2382 SN35N_2382 2506006 2506347 + hypothetical protein hypothetical protein zj316_2569 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2381 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2382 SN35N_2383 SN35N_2383 hsp2 hsp2 2506376 2506795 + small heat shock protein identified by MetaGeneAnnotator%3B putative%3B~molecular chaperone (small heat shock protein) [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0071%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimer interface [polypeptide binding]%3B~small heat shock protein [Lactobacillus plantarum ZJ316] gene gene2382 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2383 SN35N_2384 SN35N_2384 SN35N_2384 2507062 2507424 - hypothetical protein hypothetical protein zj316_2567 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2383 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2384 SN35N_2385 SN35N_2385 SN35N_2385 2507575 2508099 + hypothetical protein domain of unknown function (DUF1836)%3B pfam08876%3B~hypothetical protein zj316_2566 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2384 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2385 SN35N_2386 SN35N_2386 rrp8 rrp8 2508276 2509025 + two-component system response regulator LytTr DNA-binding domain%3B pfam04397%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~response regulator of the LytR/AlgR family [transcription / signal transduction mechanisms]%3B COG3279%3B~two-component system response regulator [Lactobacillus plantarum ZJ316] gene gene2385 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2386 SN35N_2387 SN35N_2387 SN35N_2387 2509035 2509691 + metal-dependent phosphohydrolase%2C HD family identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cl17215%3B~metal-dependent phosphohydrolase%2C HD family [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted HD superfamily hydrolase [general function prediction only] gene gene2386 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2387 SN35N_2388 SN35N_2388 SN35N_2388 2509864 2510643 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2387 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2388 SN35N_2389 SN35N_2389 SN35N_2389 2510648 2511151 - aminoacyl-tRNA deacylase%2C TbaK family aminoacyl-tRNA deacylase%2C TbaK family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative deacylase active site [active] gene gene2388 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2389 SN35N_2390 SN35N_2390 SN35N_2390 2511276 2512001 + transcriptional regulator DNA-binding site [nucleotide binding]%3B~UTRA domain%3B cl01230%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~transcriptional regulator [Lactobacillus gasseri ATCC 33323]%3B~transcriptional regulators [transcription]%3B COG2188%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2389 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2390 SN35N_2391 SN35N_2391 xynC xynC 2512016 2512864 + acetyl xylosidase S-formylglutathione hydrolase%3B~acetyl xylosidase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted esterase [general function prediction only] gene gene2390 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2391 SN35N_2392 SN35N_2392 xpk1 xpk1 2513094 2515460 + phosphoketolase TPP-binding site%3B~XFP C-terminal domain%3B pfam09363%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoketolase [Lactobacillus plantarum JDM1]%3B~putative phosphoketolase%3B provisional gene gene2391 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2392 SN35N_2393 SN35N_2393 SN35N_2393 2515815 2516990 + glycosyltransferase glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~glycosyltransferase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative ADP-binding pocket [chemical binding] gene gene2392 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2393 SN35N_2394 SN35N_2394 betT betT 2517200 2517397 + BetT protein BetT protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2393 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2394 SN35N_2395 SN35N_2395 SN35N_2395 2517560 2517880 - transcription regulator%2C Xre family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C Xre family [Lactobacillus plantarum ZJ316] gene gene2394 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2395 SN35N_2396 SN35N_2396 SN35N_2396 2518283 2519401 + hypothetical protein hypothetical protein zj316_2555 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc-ribbon domain%3B pfam13248 gene gene2395 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2396 SN35N_2397 SN35N_2397 SN35N_2397 2519436 2520311 + Brp/Blh family beta-carotene 15%2C15'-monooxygenase Brp/Blh family beta-carotene 15%2C15'-monooxygenase [Lactobacillus plantarum ZJ316]%3B~double zinc ribbon%3B pfam12773%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc-ribbon domain%3B pfam13240 gene gene2396 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2397 SN35N_2398 SN35N_2398 SN35N_2398 2520406 2521560 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2397 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2398 SN35N_2399 SN35N_2399 rluA rluA 2521725 2522627 - pseudouridine synthase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pseudouridine synthase [Lactobacillus plantarum ZJ316]%3B~pseudouridine synthase%2C RsuA/RluD family%3B cd02869%3B~pseudouridylate synthases%2C 23S RNA-specific [translation%2C ribosomal structure and biogenesis]%3B COG0564 gene gene2398 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2399 SN35N_2400 SN35N_2400 SN35N_2400 2522711 2523172 - nucleotide-binding protein%2C universal stress protein UspA family identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein%2C universal stress protein UspA family [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2399 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2400 SN35N_2401 SN35N_2401 acm2 acm2 2523674 2525929 + cell wall hydrolase/muramidase bacterial SH3 domain%3B pfam08460%3B~cell wall hydrolase/muramidase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~muramidase (flagellum-specific) [cell motility and secretion / intracellular trafficking and secretion]%3B COG1705%3B~organism:Lactobacillus plantarum WCFS1 gene gene2400 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2401 SN35N_2402 SN35N_2402 lplA1 lplA1 2526431 2527444 + lipoate-protein ligase bacterial lipoate protein ligase C-terminus%3B pfam10437%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoate-protein ligase A [coenzyme metabolism]%3B COG0095%3B~lipoate-protein ligase [Lactobacillus plantarum subsp. plantarum P-8]%3B~lipoyltransferase and lipoate-protein ligase%3B TIGR00545%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2401 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2402 SN35N_2403 SN35N_2403 SN35N_2403 2527458 2527838 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2402 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2403 SN35N_2404 SN35N_2404 SN35N_2404 2527872 2528321 + hypothetical protein hypothetical protein zj316_2541 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2403 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2404 SN35N_2405 SN35N_2405 SN35N_2405 2528913 2529419 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function (DUF2798)%3B pfam11391 gene gene2404 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2405 SN35N_2406 SN35N_2406 SN35N_2406 2529859 2530521 + hypothetical protein hypothetical protein zj316_2538 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2405 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2406 SN35N_2407 SN35N_2407 SN35N_2407 2530803 2531102 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2406 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2407 SN35N_2408 SN35N_2408 cgs cgs 2531550 2532671 + cysteine gamma synthase/O-succinylhomoserine (thiol)-lyase catalytic residue [active]%3B~cystathionine gamma-synthase%3B reviewed%3B~cysteine gamma synthase/O-succinylhomoserine (thiol)-lyase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridoxal 5'-phosphate binding pocket [chemical binding] gene gene2407 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2408 SN35N_2409 SN35N_2409 trxH trxH 2532743 2533063 + thioredoxin H-type catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~thioredoxin H-type [Lactobacillus plantarum ZJ316] gene gene2408 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2409 SN35N_2410 SN35N_2410 SN35N_2410 2533227 2534012 + S9 family serine peptidase S9 family serine peptidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~alpha/beta hydrolase family%3B pfam12697%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prolyl oligopeptidase family%3B pfam00326 gene gene2409 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2410 SN35N_2411 SN35N_2411 SN35N_2411 2534071 2534466 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2410 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2411 SN35N_2412 SN35N_2412 pox3 pox3 2534699 2536456 + pyruvate oxidase PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyrimidine (PYR) binding domain of POX%3B cd07039%3B~pyruvate oxidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~pyruvate oxidase%3B TIGR02720%3B~tetramer interface [polypeptide binding]%3B~thiamine pyrophosphate enzyme%2C central domain%3B pfam00205 gene gene2411 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2412 SN35N_2413 SN35N_2413 isp2 isp2 2536457 2536591 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase [Lactobacillus plantarum JDM1] gene gene2412 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2413 SN35N_2414 SN35N_2414 isp2 isp2 2536609 2537391 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1] gene gene2413 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2414 SN35N_2415 SN35N_2415 isp2 isp2 2537396 2538112 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene2414 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2415 SN35N_2416 SN35N_2416 SN35N_2416 2539274 2539558 + acetyltransferase acetyltransferase[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2415 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2416 SN35N_2417 SN35N_2417 SN35N_2417 2539573 2539929 + hypothetical protein hypothetical protein zj316_2530 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2416 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2417 SN35N_2418 SN35N_2418 SN35N_2418 2540057 2540908 - hypothetical protein hypothetical protein zj316_2529 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2417 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2418 SN35N_2419 SN35N_2419 SN35N_2419 2540918 2541334 - transcription regulator%2C cro/CI family helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator%2C cro/CI family [Lactobacillus plantarum ZJ316] gene gene2418 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2419 SN35N_2420 SN35N_2420 SN35N_2420 2541352 2543151 - oligoendopeptidase F Zn binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligoendopeptidase F [Lactobacillus plantarum 16]%3B~oligoendopeptidase%2C pepF/M3 family%3B TIGR02290%3B~organism:Lactobacillus plantarum 16%3B~peptidase family M3B Oligopeptidase F (PepF)%3B cd09607 gene gene2419 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2420 SN35N_2421 SN35N_2421 SN35N_2421 2543268 2544191 + alpha/beta hydrolase alpha/beta hydrolase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~alpha/beta hydrolase family%3B pfam12695%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2420 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2421 SN35N_2422 SN35N_2422 SN35N_2422 2545034 2545315 - bacteriocin immunity protein bacteriocin immunity protein [Lactobacillus plantarum ZJ316]%3B~enterocin A immunity%3B pfam08951%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2421 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2422 SN35N_2423 SN35N_2423 SN35N_2423 2545503 2545892 + transcription regulator%2C GntR family DNA-binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~transcription regulator%2C GntR family [Lactobacillus plantarum ZJ316]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene2422 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2423 SN35N_2424 SN35N_2424 SN35N_2424 2545873 2546583 + ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~ABC-type Na+ transport system%2C ATPase component [energy production and conversion / inorganic ion transport and metabolism]%3B COG4555%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2423 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2424 SN35N_2425 SN35N_2425 SN35N_2425 2546573 2547346 + ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2424 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2425 SN35N_2426 SN35N_2426 SN35N_2426 2547407 2547961 - pyrazinamidase/nicotinamidase catalytic triad [active]%3B~conserved cis-peptide bond%3B~identified by MetaGeneAnnotator%3B putative%3B~isochorismatase family%3B pfam00857%3B~organism:Lactobacillus helveticus DPC 4571%3B~pyrazinamidase/nicotinamidase [Lactobacillus helvet icus DPC 4571] gene gene2425 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2426 SN35N_2427 SN35N_2427 SN35N_2427 2548127 2548336 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum (strain ST-III) gene gene2426 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2427 SN35N_2428 SN35N_2428 dxs dxs 2548388 2550139 - 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxy-D-xylulose-5-phosphate synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~1-deoxy-D-xylulose-5-phosphate synthase%3B provisional%3B~PYR/PP interface [polypeptide binding]%3B~TPP binding site [chemical binding]%3B~TPP-binding site%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS)%2C transketolase (TK)%2C and related proteins%3B cd07033%3B~transketolase%2C C-terminal domain%3B pfam02780 gene gene2427 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2428 SN35N_2429 SN35N_2429 SN35N_2429 2550409 2552412 - Na(+)/H(+) antiporter Kef-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B cl10482%3B~Na(+)/H(+) antiporter [Lactobacillus plantarum JDM1]%3B~NhaP-type Na+/H+ and K+/H+ antiporters [inorganic ion transport and metabolism]%3B COG0025%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2428 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2429 SN35N_2430 SN35N_2430 SN35N_2430 2552657 2553676 + NAD(P)-dependent oxidoreductase NAD(P)-dependent oxidoreductase [Listeria monocytog enes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~oxidoreductase family%2C C-terminal alpha/beta domain%3B pfam02894%3B~oxidoreductase family%2C NAD-binding rossmann fold%3B pfam01408%3B~putative oxidoreductase%3B provisional gene gene2429 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2430 SN35N_2431 SN35N_2431 SN35N_2431 2553902 2554879 + oxidoreductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1]%3B~oxidoreductase family%2C NAD-binding rossmann fold%3B pfam01408%3B~predicted dehydrogenases and related proteins [general function prediction only]%3B COG0673 gene gene2430 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2431 SN35N_2432 SN35N_2432 SN35N_2432 2554975 2555838 - transcription regulator%2C RpiR family helix-turn-helix domain%2C rpiR family%3B pfam01418%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active]%3B~transcription regulator%2C RpiR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1737 gene gene2431 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2432 SN35N_2433 SN35N_2433 ccpB ccpB 2555999 2556937 + LacI family transcriptional regulator DNA binding site [nucleotide binding]%3B~LacI family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species%3B cd06286%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene2432 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2433 SN35N_2434 SN35N_2434 SN35N_2434 2556956 2557726 + hydrolase%2C HAD superfamily%2C Cof family haloacid dehalogenase-like hydrolase%3B pfam08282%3B~hydrolase%2C HAD superfamily%2C Cof family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2433 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2434 SN35N_2435 SN35N_2435 rnh rnh 2557813 2558697 - ribonuclease H Caulimovirus viroplasmin%3B pfam01693%3B~RNA/DNA hybrid binding site [nucleotide binding]%3B~RNase HI family found mainly in prokaryotes%3B cd09278%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~ribonuclease H[Lactobacillus plantarum JDM1] gene gene2434 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2435 SN35N_2436 SN35N_2436 SN35N_2436 2558845 2559801 - purine nucleosidase COG1957 Inosine-uridine nucleoside N-ribohydrolase%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Leuconostoc sp. C2%3B~purine nucleosidase [Leuconostoc sp. C2] gene gene2435 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2436 SN35N_2437 SN35N_2437 SN35N_2437 2560001 2560561 + nitroreductase family 1 protein FMN binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitroreductase family 1 protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2436 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2437 SN35N_2438 SN35N_2438 SN35N_2438 2560582 2561466 + polyphosphate:nucleotide phosphotransferase%2CPPK2 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~polyphosphate:nucleotide phosphotransferase%2CPPK2 family [Lactobacillus plantarum WCFS1]%3B~polyphosphate:nucleotide phosphotransferase%2CPPK2 family%3B TIGR03709 gene gene2437 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2438 SN35N_2439 SN35N_2439 SN35N_2439 2561589 2563253 - cell surface protein precursor cell surface protein precursor [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~predicted outer membrane protein [cell envelope biogenesis%2C outer membrane] gene gene2438 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2439 SN35N_2440 SN35N_2440 SN35N_2440 2563177 2563434 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene2439 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2440 SN35N_2441 SN35N_2441 SN35N_2441 2563526 2564287 - cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase%2C DUF915 family%2Cmembrane-bound [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2440 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2441 SN35N_2442 SN35N_2442 SN35N_2442 2564411 2565406 + ferredoxin--NADP reductase NAD(P)-binding rossmann-like domain%3B cl17500%3B~ferredoxin--NADP reductase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070%3B~thioredoxin reductase [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0492 gene gene2441 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2442 SN35N_2443 SN35N_2443 glpQ4 glpQ4 2566521 2568314 - glycerophosphodiester phosphodiesterase catalytic site [active]%3B~glycerophosphodiester phosphodiesterase [Lactobacillus plantarum ZJ316]%3B~glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases%3B cd08579%3B~glycerophosphoryl diester phosphodiesterase [energy production and conversion]%3B COG0584%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane domain of glycerophosphoryl diester phosphodiesterase%3B pfam10110%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active]%3B~putative metal binding site [ion binding] gene gene2442 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2443 SN35N_2444 SN35N_2444 SN35N_2444 2568528 2569457 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene2443 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2444 SN35N_2445 SN35N_2445 SN35N_2445 2569743 2571896 - sulfatase%2C alkaline phosphatase superfamily%2C membrane-bound identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoglycerol transferase and related proteins%2C alkaline phosphatase superfamily [cell envelope biogenesis%2C outer membrane]%3B COG1368%3B~sulfatase%2C alkaline phosphatase superfamily%2Cmembran e-bound [Lactobacillus plantarum ZJ316]%3B~sulfatase%3B pfam00884 gene gene2444 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2445 SN35N_2446 SN35N_2446 SN35N_2446 2572087 2572524 + GNAT family acetyltransferase GNAT family acetyltransferase [Lactobacillus plantarum WCFS1]%3B~N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferases [general function prediction only]%3B COG0456%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2445 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2446 SN35N_2447 SN35N_2447 SN35N_2447 2572886 2575060 + cell surface adherence protein Cna protein B-type domain%3B pfam05738%3B~cell surface adherence protein%2Ccollagen-binding dom ain%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~collagen binding domain%3B pfam05737%3B~cornifin (SPRR) family%3B pfam02389%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2446 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2447 SN35N_2448 SN35N_2448 SN35N_2448 2575522 2578206 - transporter%2C MMPL family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~predicted drug exporters of the RND superfamily [general function prediction only]%3B~transporter%2C MMPL family [Lactobacillus plantarum 16] gene gene2447 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2448 SN35N_2449 SN35N_2449 SN35N_2449 2578359 2578988 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF1211)%3B pfam06736 gene gene2448 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2449 SN35N_2450 SN35N_2450 SN35N_2450 2578988 2579206 + hypothetical protein hypothetical protein zj316_2494 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2449 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2450 SN35N_2451 SN35N_2451 bsh4 bsh4 2579255 2580208 - choloylglycine hydrolase choloylglycine hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~linear amide C-N hydrolases%2C choloylglycine hydrolase family%3B pfam02275%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2450 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2451 SN35N_2452 SN35N_2452 SN35N_2452 2580439 2581500 + aspartate semialdehyde dehydrogenase aspartate semialdehyde dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~aspartate-semialdehyde dehydrogenase%3B provisional%3B~glyceraldehyde 3-phosphate dehydrogenase%2C C-terminal domain%3B cl15856%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2451 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2452 SN35N_2453 SN35N_2453 SN35N_2453 2581818 2582333 + hypothetical protein START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily%3B cl14643%3B~hydrophobic ligand binding site%3B~hypothetical protein zj316_2491 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2452 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2453 SN35N_2454 SN35N_2454 SN35N_2454 2582372 2583196 + short-chain dehydrogenase/oxidoreductase 17beta hydroxysteroid dehydrogenase-like%2C classical (c) SDRs%3B cd05374%3B~NADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~short chain dehydrogenase%3B provisional%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316]%3B~steroid binding site gene gene2453 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2454 SN35N_2455 SN35N_2455 SN35N_2455 2583245 2583754 + transcription regulator%2C MerR family DNA binding residues [nucleotide binding]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator%2C MerR family [Lactobacillus plantarum ZJ316] gene gene2454 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2455 SN35N_2456 SN35N_2456 SN35N_2456 2583905 2584252 - hypothetical protein domain of unknown function (DU1801)%3B pfam08818%3B~hypothetical protein zj316_2488 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2455 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2456 SN35N_2457 SN35N_2457 SN35N_2457 2584267 2585175 - Mg2+/Co2+ transport protein Cl binding site [ion binding]%3B~CorA-like Mg2+ transporter protein%3B pfam01544%3B~Mg2+/Co2+ transport protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomer interface [polypeptide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family%3B cd12827 gene gene2456 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2457 SN35N_2458 SN35N_2458 SN35N_2458 2585259 2586422 - VanZ/RDD domain protein RDD family%3B pfam06271%3B~VanZ like family%3B pfam04892%3B~VanZ/RDD domain protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2457 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2458 SN35N_2459 SN35N_2459 hisK hisK 2586644 2587480 + histidinol phosphatase dimer interface [polypeptide binding]%3B~histidinol phosphatase [Lactobacillus plantarum WCFS1]%3B~histidinol-phosphatase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~polymerase and histidinol phosphatase domain of histidinol phosphate phosphatase of Hisj like%3B cd12110 gene gene2458 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2459 SN35N_2460 SN35N_2460 hisZ hisZ 2587946 2589097 + ATP phosphoribosyltransferase regulatory subunit ATP phosphoribosyltransferase regulatory subunit [Lactobacillus plantarum ZJ316]%3B~ATP phosphoribosyltransferase%2C regulatory subunit%3B TIGR00443%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2459 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2460 SN35N_2461 SN35N_2461 hisG hisG 2589090 2589746 + ATP phosphoribosyltransferase ATP phosphoribosyltransferase [Lactobacillus plantarum ZJ316]%3B~ATP phosphoribosyltransferase [amino acid transport and metabolism]%3B COG0040%3B~ATP phosphoribosyltransferase catalytic subunit%3B reviewed%3B PRK01686%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2460 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2461 SN35N_2462 SN35N_2462 SN35N_2462 2589746 2591032 + histidinol dehydrogenase NAD binding site [chemical binding]%3B~catalytic residues [active]%3B~dimerization interface [polypeptide binding]%3B~histidinol dehydrogenase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~histidinol dehydrogenase%3B TIGR00069%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~product binding site%3B~substrate binding site [chemical binding]%3B~zinc binding site [ion binding] gene gene2461 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2462 SN35N_2463 SN35N_2463 hisB hisB 2591105 2591689 + imidazoleglycerol-phosphate dehydratase 3-fold/trimer interface [polypeptide binding]%3B~4-fold oligomerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~imidazoleglycerol-phosphate dehydratase [Listeria m onocytogenes]%3B~imidazoleglycerol-phosphate dehydratase%3B cd07914%3B~metal binding residues [ion binding]%3B~organism:Listeria monocytogenes%3B~putative active site pocket [active] gene gene2462 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2463 SN35N_2464 SN35N_2464 hisH hisH 2591690 2592316 + imidazole glycerol phosphate synthase subunit HisH catalytic triad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~imidazole glycerol phosphate synthase subunit HisH [Lactobacillus plantarum ZJ316]%3B~imidazole glycerol phosphate synthase subunit HisH%3B provisional%3B PRK13141%3B~organism:Lactobacillus plantarum ZJ316%3B~oxyanion strand%3B~putative active site [active]%3B~type 1 glutamine amidotransferase (GATase1) domain found in imidazole glycerol phosphate synthase (IGPS)%3B cd01748 gene gene2463 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2464 SN35N_2465 SN35N_2465 hisA hisA 2592291 2593016 + phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase catalytic residues [active]%3B~histidine biosynthesis protein%3B pfam00977%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase [Lactobacillus plantarum JDM1] gene gene2464 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2465 SN35N_2466 SN35N_2466 SN35N_2466 2593010 2593768 + imidazole glycerol phosphate synthase glutamase interaction surface [polypeptide binding]%3B~histidine biosynthesis protein%3B pfam00977%3B~identified by MetaGeneAnnotator%3B putative%3B~imidazole glycerol phosphate synthase [Listeria monocytogenes]%3B~organism:Listeria monocytogenes%3B~substrate binding site [chemical binding] gene gene2465 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2466 SN35N_2467 SN35N_2467 SN35N_2467 2593765 2594091 + phosphoribosyl-AMP cyclohydrolase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphoribosyl-AMP cyclohydrolase [Lactobacillus rhamnosus GG]%3B~phosphoribosyl-AMP cyclohydrolase%3B reviewed%3B PRK00051%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2466 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2467 SN35N_2468 SN35N_2468 hisE hisE 2594232 2594552 + phosphoribosyl-ATP pyrophosphatase identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nucleoside triphosphate pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in Escherichia coli phosphoribosyl-ATP pyrophosphohydrolase (HisIE or PRATP-PH) and its homologs%3B cd11534%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoribosyl-ATP pyrophosphatase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2467 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2468 SN35N_2469 SN35N_2469 hisC hisC 2594564 2595634 + histidinol-phosphate aminotransferase catalytic residue [active]%3B~histidinol-phosphate aminotransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~histidinol-phosphate aminotransferase%3B provisional%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~pyridoxal 5'-phosphate binding site [chemical binding] gene gene2468 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2469 SN35N_2470 SN35N_2470 maa1 maa1 2595820 2596374 + maltose O-acetyltransferase CoA binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene2469 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2470 SN35N_2471 SN35N_2471 SN35N_2471 2596550 2597323 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein%2C YkoY family%3B TIGR03716%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2470 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2471 SN35N_2472 SN35N_2472 SN35N_2472 2597323 2598180 + 2-hydroxy-3-oxopropionate reductase 2-hydroxy-3-oxopropionate reductase [Enterococcus c asseliflavus EC20]%3B~3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [lipid metabolism]%3B COG2084%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2471 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2472 SN35N_2473 SN35N_2473 npr2 npr2 2599364 2600719 - NADH peroxidase NAD(P)-binding rossmann-like domain%3B cl17500%3B~NADH peroxidase [Lactobacillus plantarum ZJ316]%3B~coenzyme A disulfide reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene2472 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2473 SN35N_2474 SN35N_2474 SN35N_2474 2600995 2601777 - ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum ZJ316]%3B~ABC transporter signature motif%3B~ABC-type uncharacterized transport system%2C ATPase component [general function prediction only]%3B COG1101%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2473 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2474 SN35N_2475 SN35N_2475 SN35N_2475 2601764 2602672 - ribose/xylose/arabinose/galactoside ABC-type transporter permease TM-ABC transporter signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~ribose/xylose/arabinose/galactoside ABC-type transporter permease [Lactobacillus gasseri ATCC 33323] gene gene2474 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2475 SN35N_2476 SN35N_2476 SN35N_2476 2602669 2603616 - ABC transporter substrate-binding protein ABC transporter substrate-binding protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative ligand binding site [chemical binding]%3B~type I periplasmic ligand-binding domain of uncharacterized ABC-type transport systems that are predicted to be involved in the uptake of amino acids%2C peptides%2C or inorganic ions%3B cd06325%3B~zinc binding site [ion binding] gene gene2475 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2476 SN35N_2477 SN35N_2477 SN35N_2477 2603555 2603899 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2476 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2477 SN35N_2478 SN35N_2478 metA metA 2605091 2605966 + homoserine O-succinyltransferase conserved cys residue [active]%3B~homoserine O-succinyltransferase [Lactobacillus plantarum ZJ316]%3B~homoserine O-succinyltransferase%3B pfam04204%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~proposed active site lysine [active]%3B~type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS)%3B cd03131 gene gene2477 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2478 SN35N_2479 SN35N_2479 SN35N_2479 2605969 2607255 + O-acetylhomoserine sulfhydrylase / O-succinylhomoserine sulfhydrylase O-acetylhomoserine sulfhydrylase / O-succinylhomose rine sulfhydrylase [Dehalobacter sp. CF]%3B~O-acetylhomoserine sulfhydrylase [amino acid transport and metabolism]%3B COG2873%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Dehalobacter sp. CF%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~substrate-cofactor binding pocket gene gene2478 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2479 SN35N_2480 SN35N_2480 hom1 hom1 2607306 2608586 + homoserine dehydrogenase homoserine dehydrogenase [Lactobacillus plantarum JDM1]%3B~homoserine dehydrogenase [amino acid transport and metabolism]%3B COG0460%3B~homoserine dehydrogenase%2C NAD binding domain%3B pfam03447%3B~homoserine dehydrogenase%3B pfam00742%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2479 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2480 SN35N_2481 SN35N_2481 SN35N_2481 2608737 2609633 + DegV family protein DegV family protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene2480 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2481 SN35N_2482 SN35N_2482 panE1 panE1 2610239 2611213 + 2-dehydropantoate 2-reductase 2-dehydropantoate 2-reductase [Lactobacillus plantarum subsp. plantarum P-8]%3B~2-dehydropantoate 2-reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~ketopantoate reductase PanE/ApbA C terminal%3B pfam08546%3B~ketopantoate reductase PanE/ApbA%3B pfam02558%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2481 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2482 SN35N_2483 SN35N_2483 pts18CBA pts18CBA 2611403 2612533 + N-acetylglucosamine and glucose PTS%2C EIICBA N-acetylglucosamine and glucose PTS%2C EIICBA [Lactobacillus plantarum JDM1]%3B~PTS system%2C N-acetylglucosamine-specific IIBC component%3B TIGR01998%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B COG1263 gene gene2482 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2483 SN35N_2484 SN35N_2484 SN35N_2484 2612641 2613816 + transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase%2C mutator family%3B pfam00872 gene gene2483 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2484 SN35N_2485 SN35N_2485 pts18CBA pts18CBA 2613906 2614751 + PTS system%2C N-acetylglucosamine and glucose-specific EIICBA component HPr interaction site%3B~PTS system%2C N-acetylglucosamine and glucose-specific EIICBA component [Lactobacillus plantarum ZJ316]%3B~PTS system%2C N-acetylglucosamine-specific IIBC component%3B TIGR01998%3B~active site turn [active]%3B~glycerol kinase (GK) interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIA components [carbohydrate transport and metabolism]%3B COG2190 gene gene2484 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2485 SN35N_2486 SN35N_2486 SN35N_2486 2615020 2615289 + hypothetical protein hypothetical protein zj316_2459 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2485 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2486 SN35N_2487 SN35N_2487 SN35N_2487 2615376 2615756 - lactoylglutathione lyase family protein dimer interface [polypeptide binding]%3B~glyoxalase/bleomycin resistance protein/dioxygenase superfamily%3B pfam00903%3B~identified by MetaGeneAnnotator%3B putative%3B~lactoylglutathione lyase family protein [Lactobacillus plantarum WCFS1]%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~this conserved domain belongs to a superfamily including the bleomycin resistance protein%2C glyoxalase I%2C and type I ring-cleaving dioxygenases%3B cd07253 gene gene2486 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2487 SN35N_2488 SN35N_2488 SN35N_2488 2616794 2617381 + acetyltransferase N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2487 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2488 SN35N_2489 SN35N_2489 SN35N_2489 2617466 2619019 + ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC transporter signature motif%3B~ABC transporter%3B pfam12848%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of elongation factor 3%2C subfamily F%3B cd03221%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~ATPase components of ABC transporters with duplicated ATPase domains [general function prediction only]%3B COG0488%3B~D-loop%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene2488 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2489 SN35N_2490 SN35N_2490 SN35N_2490 2619280 2620470 - diguanylate cyclase/phosphodiesterase GGDEF domain I-site%3B~c-di-GMP synthetase (diguanylate cyclase%2C GGDEF domain) [signal transduction mechanisms]%3B~diguanylate cyclase/phosphodiesterase%2C GGDEF domain [Lactobacillus plantarum WCFS1]%3B~diguanylate-cyclase (DGC) or GGDEF domain%3B cd01949%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2489 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2490 SN35N_2491 SN35N_2491 SN35N_2491 2620694 2620924 + hypothetical protein hypothetical protein zj316_2452 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2490 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2491 SN35N_2492 SN35N_2492 SN35N_2492 2620950 2621171 + hypothetical protein hypothetical protein zj316_2451 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2491 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2492 SN35N_2493 SN35N_2493 SN35N_2493 2621318 2621782 - transcription regulator%2C AsnC-type AsnC family%3B pfam01037%3B~helix_turn_helix ASNC type%3B smart00344%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C AsnC-type [Lactobacillus plantarum ZJ316] gene gene2492 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2493 SN35N_2494 SN35N_2494 SN35N_2494 2622004 2622897 + cell wall-associated hydrolase NlpC/P60 family%3B pfam00877%3B~cell wall-associated hydrolase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~cell wall-associated hydrolases (invasion-associated proteins) [cell envelope biogenesis%2C outer membrane]%3B COG0791%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2493 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2494 SN35N_2495 SN35N_2495 SN35N_2495 2622964 2623827 + cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2494 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2495 SN35N_2496 SN35N_2496 SN35N_2496 2624389 2624553 + hypothetical protein hypothetical protein zj316_2446 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2495 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2496 SN35N_2497 SN35N_2497 SN35N_2497 2624612 2625355 + phosphohydrolase%2C MutT/nudix family ADP-ribose pyrophosphatase [nucleotide transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphohydrolase%2C MutT/nudix family [Lactobacillus plantarum ZJ316]%3B~uncharacterized conserved protein [general function prediction only] gene gene2496 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2497 SN35N_2498 SN35N_2498 SN35N_2498 2625461 2626648 + carbohydrate transporter%2C major facilitator superfamily benzoate transport%3B TIGR00895%3B~carbohydrate transporter%2C major facilitator superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene2497 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2498 SN35N_2499 SN35N_2499 SN35N_2499 2626862 2627179 + hypothetical protein hypothetical protein zj316_2443 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2498 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2499 SN35N_2500 SN35N_2500 SN35N_2500 2627255 2627815 + hypothetical membrane protein ECF-type riboflavin transporter%2C S component%3B cl17272%3B~hypothetical membrane protein%2C DUF1393 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2499 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2500 SN35N_2501 SN35N_2501 SN35N_2501 2628572 2629510 - transport protein EamA-like transporter family%3B cl17759%3B~EamA-like transporter family%3B pfam00892%3B~carboxylate/amino acid/amine transporter%3B TIGR00950%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transport protein [Lactobacillus plantarum JDM1] gene gene2500 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2501 SN35N_2502 SN35N_2502 SN35N_2502 2629707 2629976 + ACT domain protein ACT domain protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ACT domain proteins similar to the yet uncharacterized Streptococcus pneumoniae ACT domain protein%3B cd04872%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2501 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2502 SN35N_2503 SN35N_2503 SN35N_2503 2629986 2631329 + UPF0210 protein UPF0210 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized proteins with similarity to ribonucleotide reductase and pyruvate formate lyase%3B cd08025 gene gene2502 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2503 SN35N_2504 SN35N_2504 SN35N_2504 2631702 2632430 + two-component response regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus rhamnosus GG%3B~phosphorylation site [posttranslational modification]%3B~response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [signal transduction mechanisms / transcription]%3B COG0745%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~two-component response regulator [Lactobacillus rhamnosus GG] gene gene2503 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2504 SN35N_2505 SN35N_2505 hpk7 hpk7 2632427 2633950 + sensor protein ATP binding site [chemical binding]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~dimer interface [polypeptide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphorylation site [posttranslational modification]%3B~sensor protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~signal transduction histidine kinase [signal transduction mechanisms]%3B COG0642 gene gene2504 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2505 SN35N_2506 SN35N_2506 SN35N_2506 2634246 2635427 + SAM-dependent methyltransferase SAM-dependent methyltransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~middle domain of the SAM-dependent methyltransferase RlmI and related proteins%3B cd11572%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted SAM-dependent methyltransferases [general function prediction only]%3B~putative RNA binding site [nucleotide binding] gene gene2505 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2506 SN35N_2507 SN35N_2507 SN35N_2507 2635662 2636519 + putative sugar uptake protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative sugar uptake protein [Lactobacillus plantarum ZJ316]%3B~sugar transport protein%3B pfam06800 gene gene2506 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2507 SN35N_2508 SN35N_2508 pgi pgi 2636740 2638092 + glucose-6-phosphate isomerase COG0166 glucose-6-phosphate isomerase%3B~dimer interface [polypeptide binding]%3B~glucose-6-phosphate isomerase [Lactobacillus amylov orus GRL 1112]%3B~glucose-6-phosphate isomerase%3B provisional%3B PRK14097%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2507 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2508 SN35N_2509 SN35N_2509 SN35N_2509 2638518 2638709 + hypothetical protein hypothetical protein zj316_2432 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2508 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2509 SN35N_2510 SN35N_2510 SN35N_2510 2639114 2641108 + ABC superfamily ATP binding cassette transporter%2C ATP-binding and permease ABC superfamily ATP binding cassette transporter%2C ATP-binding and permease [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ABC-type antimicrobial peptide transport system%2C permease component [defense mechanisms]%3B COG0577%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide%2C and cell division protein%3B cd03255%3B~D-loop%3B~FtsX-like permease family%3B pfam02687%3B~H-loop/switch region%3B~MacB-like periplasmic core domain%3B pfam12704%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene2509 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2510 SN35N_2511 SN35N_2511 tagE4 tagE4 2641126 2642703 + poly(glycerol-phosphate) alpha-glucosyltransferase domain of unknown function (DUF1975)%3B pfam09318%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~poly(glycerol-phosphate) alpha-glucosyltransferase [Lactobacillus plantarum ZJ316] gene gene2510 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2511 SN35N_2512 SN35N_2512 SN35N_2512 2642675 2644438 + efflux ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~efflux ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~walker A/P-loop%3B~walker B gene gene2511 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2512 SN35N_2513 SN35N_2513 SN35N_2513 2645075 2645206 + hypothetical protein hypothetical protein zj316_2427 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2512 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2513 SN35N_2514 SN35N_2514 SN35N_2514 2645378 2645521 + hypothetical protein hypothetical protein zj316_2426 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2513 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2514 SN35N_2515 SN35N_2515 SN35N_2515 2645552 2645683 + hypothetical protein hypothetical protein zj316_2425 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2514 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2515 SN35N_2516 SN35N_2516 SN35N_2516 2645716 2645847 + hypothetical protein hypothetical protein zj316_2425 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2515 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2516 SN35N_2517 SN35N_2517 SN35N_2517 2645880 2646011 + hypothetical protein hypothetical protein zj316_2425 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2516 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2517 SN35N_2518 SN35N_2518 SN35N_2518 2646044 2646175 + hypothetical protein hypothetical protein zj316_2425 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2517 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2518 SN35N_2519 SN35N_2519 SN35N_2519 2646208 2646351 + hypothetical protein hypothetical protein zj316_2424 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2518 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2519 SN35N_2520 SN35N_2520 SN35N_2520 2646383 2646514 + hypothetical protein hypothetical protein zj316_2423 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2519 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2520 SN35N_2521 SN35N_2521 SN35N_2521 2647116 2647541 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Beauveria bassiana (strain ARSEF 2860) gene gene2520 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2521 SN35N_2522 SN35N_2522 SN35N_2522 2647642 2649789 + mucus-binding protein%2C LPXTG-motif cell wall anchor cell-wall surface anchor repeat%3B pfam13461%3B~identified by MetaGeneAnnotator%3B putative%3B~mucus-binding protein%2C LPXTG-motif cell wall anchor [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2521 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2522 SN35N_2523 SN35N_2523 SN35N_2523 2649889 2651865 + hypothetical protein domain of unknown function (DUF1975)%3B pfam09318%3B~hypothetical protein zj316_2419 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2522 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2523 SN35N_2524 SN35N_2524 SN35N_2524 2651920 2652405 + transcription regulator%2C MarR family MarR family%3B pfam12802%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulators [transcription]%3B COG1846 gene gene2523 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2524 SN35N_2525 SN35N_2525 SN35N_2525 2652454 2652726 - hypothetical protein hypothetical protein zj316_2417 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2524 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2525 SN35N_2526 SN35N_2526 SN35N_2526 2652751 2652978 - hypothetical protein hypothetical protein zj316_2416 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2525 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2526 SN35N_2527 SN35N_2527 SN35N_2527 2653475 2654632 - prophage P2b protein 1%2C integrase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase [DNA replication%2C recombination%2C and repair]%3B COG0582%3B~organism:Lactobacillus plantarum 16%3B~prophage P2b protein 1%2C integrase [Lactobacillus plantarum 16] gene gene2526 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2527 SN35N_2528 SN35N_2528 SN35N_2528 2654685 2655251 - prophage P2b protein 2%2C phage cro/CI family transcriptional regulator helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 2%2C phage cro/CI family transcr iptional regulator [Lactobacillus plantarum WCFS1]%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene2527 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2528 SN35N_2529 SN35N_2529 SN35N_2529 2655384 2655587 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fabifermentans T30PCM01 gene gene2528 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2529 SN35N_2530 SN35N_2530 SN35N_2530 2655571 2655756 + prophage P2b protein 4 helix-turn-helix domain%3B pfam12728%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 4 [Lactobacillus plantarum WCFS1] gene gene2529 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2530 SN35N_2531 SN35N_2531 SN35N_2531 2656025 2656279 + prophage P2b protein 6 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 6 [Lactobacillus plantarum WCFS1] gene gene2530 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2531 SN35N_2532 SN35N_2532 SN35N_2532 2656276 2657076 + prophage Lp3 protein 7 DNA-binding residues [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~polymerase nucleotide-binding site%3B~primase C terminal 1 (PriCT-1)%3B smart00942%3B~primase nucleotide-binding site [nucleotide binding]%3B~prophage Lp3 protein 7 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2531 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2532 SN35N_2533 SN35N_2533 SN35N_2533 2657076 2658470 + prophage P2b protein 8%2C helicase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 8%2C helicase [Lactobacillus plantarum WCFS1]%3B~virulence-associated protein E%3B pfam05272 gene gene2532 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2533 SN35N_2534 SN35N_2534 SN35N_2534 2658629 2658820 + prophage P2b protein 10 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 10 [Lactobacillus plantarum WCFS1] gene gene2533 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2534 SN35N_2535 SN35N_2535 SN35N_2535 2658807 2659145 + prophage Lp3 protein 11 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phage head-tail joining protein%3B pfam05521%3B~prophage Lp3 protein 11 [Lactobacillus plantarum JDM1] gene gene2534 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2535 SN35N_2536 SN35N_2536 SN35N_2536 2659138 2659527 + prophage Lp3 protein 12 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~prophage Lp3 protein 12 [Lactobacillus plantarum JDM1] gene gene2535 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2536 SN35N_2537 SN35N_2537 SN35N_2537 2660430 2660903 + prophage P2b protein 14%2C terminase small subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage terminase%2C small subunit%3B pfam05119%3B~prophage P2b protein 14%2C terminase small subunit [Lactobacillus plantarum 16] gene gene2536 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2537 SN35N_2538 SN35N_2538 SN35N_2538 2660900 2662603 + prophage P2b protein 15%2C terminase large subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage terminase%3B pfam03354%3B~prophage P2b protein 15%2C terminase large subunit [Lactobacillus plantarum 16] gene gene2537 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2538 SN35N_2539 SN35N_2539 SN35N_2539 2662557 2662757 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2538 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2539 SN35N_2540 SN35N_2540 SN35N_2540 2662758 2663864 + prophage P2b protein 17%2C portal protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phage-related protein [function unknown]%3B cl01923%3B~prophage P2b protein 17%2C portal protein [Lactobacillus plantarum WCFS1] gene gene2539 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2540 SN35N_2541 SN35N_2541 SN35N_2541 2663854 2665434 + prophage Lp3 protein 18 Caudovirus prohead protease%3B pfam04586%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phage capsid family%3B pfam05065%3B~phage major capsid protein%2C HK97 family%3B TIGR01554%3B~prophage Lp3 protein 18 [Lactobacillus plantarum JDM1] gene gene2540 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2541 SN35N_2542 SN35N_2542 SN35N_2542 2665842 2666111 + prophage P2b protein 19%2C head-to-tail joining head-tail connector protein gp6 of bacteriophage HK97 and similar proteins%3B cd08054%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomerization interface [polypeptide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 19%2C head-to-tail joining [Lactobacillus plantarum WCFS1] gene gene2541 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2542 SN35N_2543 SN35N_2543 SN35N_2543 2666267 2666638 + prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene2542 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2543 SN35N_2544 SN35N_2544 SN35N_2544 2666720 2667025 + prophage P2b protein 21 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2b protein 21 [Lactobacillus plantarum WCFS1] gene gene2543 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2544 SN35N_2545 SN35N_2545 SN35N_2545 2667444 2667650 + prophage Lp3 protein 24 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp3 protein 24 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2544 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2545 SN35N_2546 SN35N_2546 SN35N_2546 2668002 2669123 - prophage P2a protein 2%2C integrase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P2a protein 2%2C integrase [Lactobacillus plantarum WCFS1]%3B~tyrosine recombinase XerC%3B TIGR02224 gene gene2545 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2546 SN35N_2547 SN35N_2547 SN35N_2547 2669226 2669999 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2546 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2547 SN35N_2548 SN35N_2548 SN35N_2548 2670047 2670484 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2547 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2548 SN35N_2549 SN35N_2549 SN35N_2549 2670689 2670865 - prophage P1 protein 4 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P1 protein 4 [Lactobacillus plantarum 16] gene gene2548 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2549 SN35N_2550 SN35N_2550 SN35N_2550 2671139 2671858 - prophage Lp1 protein 2 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp1 protein 2 [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2549 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2550 SN35N_2551 SN35N_2551 SN35N_2551 2672022 2672948 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2550 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2551 SN35N_2552 SN35N_2552 SN35N_2552 2673000 2673431 - Lorf143 protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage phig1e gene gene2551 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2552 SN35N_2553 SN35N_2553 cpg cpg 2673440 2673838 - Gp132 protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage phig1e gene gene2552 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2553 SN35N_2554 SN35N_2554 SN35N_2554 2674003 2674263 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Pediococcus acidilactici DSM 20284 gene gene2553 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2554 SN35N_2555 SN35N_2555 SN35N_2555 2674260 2674430 + prophage Lp2 protein 11 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage Lp2 protein 11 [Lactobacillus plantarum ZJ316] gene gene2554 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2555 SN35N_2556 SN35N_2556 SN35N_2556 2674442 2674747 + prophage P2a protein 12 domain of unknown function (DUF771)%3B cl09962%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P2a protein 12 [Lactobacillus plantarum ZJ316] gene gene2555 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2556 SN35N_2557 SN35N_2557 SN35N_2557 2674814 2675326 + prophage P2a protein 13 helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cl17200%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum 16%3B~prophage P2a protein 13 [Lactobacillus plantarum 16 ]%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene2556 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2557 SN35N_2558 SN35N_2558 SN35N_2558 2675436 2675564 + prophage P1 protein 16 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P1 protein 16 [Lactobacillus plantarum ZJ316] gene gene2557 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2558 SN35N_2559 SN35N_2559 SN35N_2559 2675533 2675700 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene2558 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2559 SN35N_2560 SN35N_2560 SN35N_2560 2675697 2676083 + prophage Lp1 protein 17 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp1 protein 17 [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2559 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2560 SN35N_2561 SN35N_2561 SN35N_2561 2676080 2676967 + prophage P1 protein 18%2C DNA single-strand annealing protein RecT RecT family%3B pfam03837%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 18%2C DNA single-strand annealing protein RecT [Lactobacillus plantarum WCFS1] gene gene2560 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2561 SN35N_2562 SN35N_2562 SN35N_2562 2676891 2677751 + prophage P1 protein 19 PDDEXK-like domain of unknown function (DUF3799)%3B pfam12684%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 19 [Lactobacillus plantarum WCFS1] gene gene2561 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2562 SN35N_2563 SN35N_2563 SN35N_2563 2677832 2678740 + prophage Lp2 protein 20 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp2 protein 20 [Lactobacillus plantarum subsp. plantarum ST-III]%3B~replication initiation and membrane attachment%3B pfam07261 gene gene2562 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2563 SN35N_2564 SN35N_2564 SN35N_2564 2678737 2679024 + prophage Lp2 protein 21 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp2 protein 21 [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2563 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2564 SN35N_2565 SN35N_2565 SN35N_2565 2679021 2679743 + bacteriophage antirepressor AntA/AntB antirepressor%3B pfam08346%3B~bacteriophage antirepressor [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~phage antirepressor protein KilAC domain%3B pfam03374 gene gene2564 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2565 SN35N_2566 SN35N_2566 SN35N_2566 2679748 2680266 + prophage Lp2 protein 23 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 23 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2565 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2566 SN35N_2567 SN35N_2567 SN35N_2567 2680263 2680640 + prophage Lp2 protein 24 endodeoxyribonuclease RusA%3B pfam05866%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 24 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2566 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2567 SN35N_2568 SN35N_2568 SN35N_2568 2680637 2681071 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Bacillus weihenstephanensis FSL R5-860 gene gene2567 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2568 SN35N_2569 SN35N_2569 SN35N_2569 2681071 2681301 + prophage P1 protein 25 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 25 [Lactobacillus plantarum WCFS1] gene gene2568 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2569 SN35N_2570 SN35N_2570 SN35N_2570 2681304 2681435 + prophage P1 protein 26 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 26 [Lactobacillus plantarum WCFS1] gene gene2569 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2570 SN35N_2571 SN35N_2571 SN35N_2571 2681573 2681752 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene2570 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2571 SN35N_2572 SN35N_2572 SN35N_2572 2681917 2682378 + prophage P1 protein 33%2C phage transcription regulator%2C ArpU family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage transcriptional regulator%2C ArpU family%3B TIGR01637%3B~prophage P1 protein 33%2C phage transcription regulat or%2C ArpU family [Lactobacillus plantarum ZJ316] gene gene2571 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2572 SN35N_2573 SN35N_2573 SN35N_2573 2682468 2682638 + hypothetical protein endopeptidase Clp ATP-binding regulatory subunit (clpX)%3B TIGR00382%3B~hypothetical protein zj316_2391 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2572 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2573 SN35N_2574 SN35N_2574 SN35N_2574 2682643 2683260 - hypothetical protein hypothetical protein zj316_2390 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2573 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2574 SN35N_2575 SN35N_2575 SN35N_2575 2683452 2683619 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2574 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2575 SN35N_2576 SN35N_2576 SN35N_2576 2683844 2684020 + prophage P2a protein 32 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~prophage P2a protein 32 [Lactobacillus plantarum 16 ] gene gene2575 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2576 SN35N_2577 SN35N_2577 SN35N_2577 2683989 2684138 + prophage P1 protein 36 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 36 [Lactobacillus plantarum WCFS1] gene gene2576 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2577 SN35N_2578 SN35N_2578 SN35N_2578 2684179 2684688 + hypothetical protein homeodomain-like domain%3B pfam13384%3B~hypothetical protein zj316_2387 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2577 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2578 SN35N_2579 SN35N_2579 SN35N_2579 2684669 2685994 + hypothetical protein hypothetical protein zj316_2386 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage terminase large subunit%3B cl12054 gene gene2578 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2579 SN35N_2580 SN35N_2580 SN35N_2580 2686042 2687592 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage portal protein%2C putative%2C A118 family%3B TIGR01542%3B~putative phage protein [Lactobacillus plantarum ZJ316] gene gene2579 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2580 SN35N_2581 SN35N_2581 SN35N_2581 2687585 2688670 + putative minor capsid protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage minor capsid protein 2%3B pfam06152%3B~putative minor capsid protein [Lactobacillus plantarum ZJ316] gene gene2580 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2581 SN35N_2582 SN35N_2582 SN35N_2582 2688734 2689336 + hypothetical protein hypothetical protein zj316_2383 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2581 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2582 SN35N_2583 SN35N_2583 SN35N_2583 2689350 2690297 + hypothetical protein dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH)%3B cl02872%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative phage protein [Lactobacillus plantarum ZJ316] gene gene2582 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2583 SN35N_2584 SN35N_2584 SN35N_2584 2690386 2690646 + hypothetical protein hypothetical protein zj316_2381 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2583 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2584 SN35N_2585 SN35N_2585 SN35N_2585 2690657 2691061 + hypothetical protein head-tail connector proteins gp6 and gp15%2C and similar proteins%3B cl12049%3B~hypothetical protein zj316_2380 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2584 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2585 SN35N_2586 SN35N_2586 SN35N_2586 2691062 2691451 + hypothetical protein hypothetical protein zj316_2379 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~minor capsid protein%3B pfam10665%3B~organism:Lactobacillus plantarum ZJ316 gene gene2585 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2586 SN35N_2587 SN35N_2587 SN35N_2587 2691448 2691849 + hypothetical protein hypothetical protein zj316_2378 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2586 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2587 SN35N_2588 SN35N_2588 SN35N_2588 2691849 2692274 + hypothetical protein hypothetical protein zj316_2377 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~minor capsid protein from bacteriophage%3B pfam12691%3B~organism:Lactobacillus plantarum ZJ316 gene gene2587 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2588 SN35N_2589 SN35N_2589 SN35N_2589 2692292 2692900 + hypothetical protein hypothetical protein zj316_2376 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2588 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2589 SN35N_2590 SN35N_2590 SN35N_2590 2693019 2693537 + hypothetical protein hypothetical protein zj316_2375 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2589 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2590 SN35N_2591 SN35N_2591 SN35N_2591 2693534 2694175 + hypothetical protein bacteriophage Gp15 protein%3B pfam06854%3B~hypothetical protein zj316_2374 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2590 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2591 SN35N_2592 SN35N_2592 SN35N_2592 2694191 2699821 + hypothetical protein N-acetyl-D-glucosamine binding site [chemical binding]%3B~catalytic residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage tail tape measure protein%2C TP901 family%2C core region%3B TIGR01760%3B~putative phage protein [Lactobacillus plantarum ZJ316] gene gene2591 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2592 SN35N_2593 SN35N_2593 SN35N_2593 2699822 2700640 + hypothetical protein hypothetical protein zj316_2372 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage tail protein%3B cl17486 gene gene2592 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2593 SN35N_2594 SN35N_2594 SN35N_2594 2700652 2701779 + hypothetical protein hypothetical protein zj316_2371 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage endopeptidase tail%3B pfam06605 gene gene2593 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2594 SN35N_2595 SN35N_2595 SN35N_2595 2701772 2701993 + hypothetical protein hypothetical protein zj316_2370 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2594 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2595 SN35N_2596 SN35N_2596 SN35N_2596 2701990 2702280 + hypothetical protein hypothetical protein zj316_2369 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2595 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2596 SN35N_2597 SN35N_2597 SN35N_2597 2702281 2704122 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene2596 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2597 SN35N_2598 SN35N_2598 SN35N_2598 2704136 2704879 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene2597 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2598 SN35N_2599 SN35N_2599 SN35N_2599 2704891 2705211 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene2598 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2599 SN35N_2600 SN35N_2600 SN35N_2600 2705208 2705354 + prophage P1 protein 57 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene2599 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2600 SN35N_2601 SN35N_2601 SN35N_2601 2705369 2706454 + prophage Lp2 protein 53 collagen triple helix repeat (20 copies)%3B pfam01391%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 53 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2600 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2601 SN35N_2602 SN35N_2602 SN35N_2602 2706451 2706666 + prophage P2a protein 54 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P2a protein 54 [Lactobacillus plantarum ZJ316] gene gene2601 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2602 SN35N_2603 SN35N_2603 SN35N_2603 2706680 2707858 + prophage Lp1 protein 58%2C lysin FOG: LysM repeat [cell envelope biogenesis%2C outer membrane]%3B COG1388%3B~bacterial SH3 domain%3B pfam08460%3B~glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage Lp1 protein 58%2C lysin [Lactobacillus plantarum ZJ316] gene gene2602 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2603 SN35N_2604 SN35N_2604 SN35N_2604 2707859 2708155 + prophage P1 protein 59 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage P1 protein 59 [Lactobacillus plantarum ZJ316] gene gene2603 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2604 SN35N_2605 SN35N_2605 SN35N_2605 2708142 2708516 + prophage Lp2 protein 58 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prophage Lp2 protein 58 [Lactobacillus plantarum subsp. plantarum P-8] gene gene2604 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2605 SN35N_2606 SN35N_2606 SN35N_2606 2708840 2708998 + cytochrome D ubiquinol oxidase cytochrome D ubiquinol oxidase [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2605 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2606 SN35N_2607 SN35N_2607 SN35N_2607 2708995 2709843 - prophage Lp2 protein 59%3B xylanase/chitin deacetylase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted xylanase/chitin deacetylase [carbohydrate transport and metabolism]%3B COG0726%3B~prophage Lp2 protein 59%3B xylanase/chitin deacetylas e[Lactobacillus plantarum JDM1]%3B~putative active site [active]%3B~putative catalytic NodB homology domain of PgaB%2C IcaB%2C and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands%3B cd10918%3B~putative metal binding site [ion binding] gene gene2606 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2607 SN35N_2608 SN35N_2608 SN35N_2608 2710066 2710458 + extracellular protein extracellular protein [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~protein of unknown function (DUF1093)%3B pfam06486 gene gene2607 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2608 SN35N_2609 SN35N_2609 SN35N_2609 2710686 2712416 + ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2608 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2609 SN35N_2610 SN35N_2610 SN35N_2610 2712416 2714305 + ABC transporter%2C ATP-binding and permease protein ABC transporter signature motif%3B~ABC transporter transmembrane region%3B pfam00664%3B~ABC transporter%2C ATP-binding and permease protein [Lactobacillus plantarum ZJ316]%3B~ABC-type multidrug transport system%2C ATPase and permease components [defense mechanisms]%3B COG1132%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2609 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2610 SN35N_2611 SN35N_2611 SN35N_2611 2714320 2715291 + lipoprotein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2610 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2611 SN35N_2612 SN35N_2612 SN35N_2612 2715507 2715869 - hypothetical protein hypothetical protein zj316_2355 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2611 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2612 SN35N_2613 SN35N_2613 SN35N_2613 2716001 2717029 + branched-chain amino acid aminotransferase branched-chain amino acid aminotransferase [Streptococcus agalactiae NEM316]%3B~branched-chain amino acid aminotransferase%3B provisional%3B~catalytic residue [active]%3B~catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus agalactiae NEM316%3B~substrate-cofactor binding pocket gene gene2612 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2613 SN35N_2614 SN35N_2614 SN35N_2614 2717281 2717466 + hypothetical protein hypothetical protein zj316_2353 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2613 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2614 SN35N_2615 SN35N_2615 SN35N_2615 2717637 2718656 + beta-lactamase family protein beta-lactamase class C and other penicillin binding proteins [defense mechanisms]%3B COG1680%3B~beta-lactamase family protein [Lactobacillus plantarum ZJ316]%3B~beta-lactamase%3B pfam00144%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2614 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2615 SN35N_2616 SN35N_2616 pmi pmi 2718733 2719698 + mannose-6-phosphate isomerase identified by MetaGeneAnnotator%3B putative%3B~mannose-6-phosphate isomerase [Lactobacillus plantarum subsp. plantarum P-8]%3B~mannose-6-phosphate isomerase%2C class I%3B TIGR00218%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphomannose isomerase [carbohydrate transport and metabolism]%3B COG1482 gene gene2615 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2616 SN35N_2617 SN35N_2617 cobQ cobQ 2719959 2720681 - cobyric acid synthase catalytic triad [active]%3B~cobyric acid synthase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~type 1 glutamine amidotransferase (GATase1) domain found in Cobyric acid synthase (CobQ)%3B cd01750 gene gene2616 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2617 SN35N_2618 SN35N_2618 SN35N_2618 2720684 2722030 - UDP-N-acetylmuramyl tripeptide synthase Mur ligase middle domain%3B pfam08245%3B~UDP-N-acetylmuramyl tripeptide synthase [cell envelope biogenesis%2C outer membrane]%3B COG0769%3B~UDP-N-acetylmuramyl tripeptide synthase[Lactobacillus plantarum JDM1]%3B~domain of unknown function (DUF1727)%3B pfam08353%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2617 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2618 SN35N_2619 SN35N_2619 SN35N_2619 2722292 2722870 + thymidine kinase ATP binding site [chemical binding]%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~thymidine kinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~thymidine kinase%3B provisional%3B~walker A motif%3B~walker B motif gene gene2618 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2619 SN35N_2620 SN35N_2620 SN35N_2620 2722884 2723966 + peptide chain release factor 1 RF-1 domain%3B cl02875%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~peptide chain release factor 1 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~peptide chain release factor 1%3B validated%3B PRK00591 gene gene2619 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2620 SN35N_2621 SN35N_2621 hemK hemK 2723959 2724825 + N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase N5-glutamine S-adenosyl-L-methionine-dependent meth yltransferase [Lactobacillus plantarum subsp. plantarum P- 8]%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein-(glutamine-N5) methyltransferase%2C release factor-specific%3B TIGR03534 gene gene2620 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2621 SN35N_2622 SN35N_2622 SN35N_2622 2725116 2726135 + translation factor SUA5 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative GTP-binding controlling metal-binding%3B pfam03481%3B~telomere recombination%3B cl00305%3B~translation factor SUA5 [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene2621 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2622 SN35N_2623 SN35N_2623 SN35N_2623 2726194 2727432 + serine hydroxymethyltransferase dimer interface [polypeptide binding]%3B~folate binding site [chemical binding]%3B~glycine-pyridoxal phosphate binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~serine hydroxymethyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~serine hydroxymethyltransferase%3B reviewed%3B PRK00011 gene gene2622 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2623 SN35N_2624 SN35N_2624 SN35N_2624 2727512 2728141 + uracil phosphoribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~uracil phosphoribosyltransferase [Enterococcus casseliflavus EC20] gene gene2623 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2624 SN35N_2625 SN35N_2625 SN35N_2625 2728459 2728632 - hypothetical protein hypothetical protein zj316_2342 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2624 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2625 SN35N_2626 SN35N_2626 pyrP pyrP 2729294 2730574 + uracil transport protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~uracil transport protein [Lactobacillus plantarum WCFS1]%3B~uracil transporter%3B provisional gene gene2625 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2626 SN35N_2627 SN35N_2627 atpB atpB 2730852 2731565 + ATP synthase subunit a ATP synthase subunit a [Lactobacillus plantarum subsp. plantarum P-8]%3B~F0F1 ATP synthase subunit A%3B validated%3B~F0F1-type ATP synthase%2C subunit a [energy production and conversion]%3B COG0356%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2626 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2627 SN35N_2628 SN35N_2628 SN35N_2628 2731603 2731815 + F0F1 ATP synthase subunit C F0F1 ATP synthase subunit C [Listeria monocytogenes ]%3B~F0F1 ATP synthase subunit C%3B validated%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2627 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2628 SN35N_2629 SN35N_2629 atpF atpF 2731869 2732384 + ATP synthase F0F1 subunit B ATP synthase F0F1 subunit B [Lactobacillus plantarum JDM1]%3B~F0F1 ATP synthase subunit B%3B validated%3B~F0F1-type ATP synthase%2C subunit b [energy production and conversion]%3B COG0711%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~produces ATP from ADP in the presence of a proton gradient across the membrane. subunit B is part of the membrane proton channel. gene gene2628 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2629 SN35N_2630 SN35N_2630 atpH atpH 2732374 2732919 + ATP synthase subunit delta ATP synthase delta (OSCP) subunit%3B pfam00213%3B~ATP synthase subunit delta [Lactobacillus plantarum subsp. plantarum P-8]%3B~F0F1 ATP synthase subunit delta%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2629 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2630 SN35N_2631 SN35N_2631 SN35N_2631 2732942 2734462 + ATP synthase subunit alpha ATP binding site [chemical binding]%3B~ATP synthase alpha/beta chain%2C C terminal domain%3B pfam00306%3B~ATP synthase alpha/beta family%2C beta-barrel domain%3B cl15275%3B~ATP synthase subunit alpha [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~F0F1 ATP synthase subunit alpha%3B validated%3B~beta subunit interaction interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~walker A motif%3B~walker B motif gene gene2630 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2631 SN35N_2632 SN35N_2632 atpG atpG 2734492 2735436 + ATP synthase gamma chain ATP synthase gamma chain [Lactobacillus plantarum ZJ316]%3B~core domain interface [polypeptide binding]%3B~delta subunit interface [polypeptide binding]%3B~epsilon subunit interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~mitochondrial ATP synthase gamma subunit%3B cd12151%3B~organism:Lactobacillus plantarum ZJ316 gene gene2631 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2632 SN35N_2633 SN35N_2633 SN35N_2633 2735461 2736864 + ATP synthase subunit beta ATP binding site [chemical binding]%3B~ATP synthase alpha/beta chain%2C C terminal domain%3B pfam00306%3B~ATP synthase alpha/beta family%2C beta-barrel domain%3B cl15275%3B~ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~F0F1 ATP synthase subunit beta%3B validated%3B~alpha subunit interaction interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~inhibitor binding site%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~walker A motif%3B~walker B motif gene gene2632 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2633 SN35N_2634 SN35N_2634 atpC atpC 2736876 2737304 + ATP synthase epsilon chain ATP synthase epsilon chain [Lactobacillus plantarum ZJ316]%3B~F0F1 ATP synthase subunit epsilon%3B validated%3B PRK00571%3B~LBP interface [polypeptide binding]%3B~epsilon subunit interface [polypeptide binding]%3B~gamma subunit interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~mitochondrial ATP synthase delta subunit%3B cd12152%3B~organism:Lactobacillus plantarum ZJ316 gene gene2633 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2634 SN35N_2635 SN35N_2635 murA1 murA1 2738278 2739594 + UDP-N-acetylglucosamine 1-carboxyvinyltransferase UDP-N-acetylglucosamine 1-carboxyvinyltransferase [ Bacillus licheniformis DSM 13 %3D ATCC 14580]%3B~UDP-N-acetylglucosamine 1-carboxyvinyltransferase%3B TIGR01072%3B~hinge%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Bacillus licheniformis DSM 13 %3D ATCC 14580 gene gene2634 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2635 SN35N_2636 SN35N_2636 SN35N_2636 2739702 2740256 + ribosomal protein serine-acetylating enzyme N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cl17182%3B~acetyltransferases%2C including N-acetylases of ribosomal proteins [translation%2C ribosomal structure and biogenesis]%3B COG1670%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosomal protein serine-acetylating enzyme [Lactobacillus plantarum ZJ316] gene gene2635 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2636 SN35N_2637 SN35N_2637 SN35N_2637 2740380 2741381 + rod shape-determining protein MreB ATP binding site [chemical binding]%3B~COG1077 Actin-like ATPase involved in cell morphogenesis%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~profilin binding site%3B~rod shape-determining protein MreB [Lactobacillus a mylovorus GRL 1112]%3B~rod shape-determining protein MreB%3B provisional gene gene2636 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2637 SN35N_2638 SN35N_2638 SN35N_2638 2741403 2741660 + putative membrane protein insertion efficiency factor hypothetical protein%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative membrane protein insertion efficiency fact or [Lactobacillus plantarum ZJ316] gene gene2637 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2638 SN35N_2639 SN35N_2639 SN35N_2639 2741644 2741871 + hypothetical protein hypothetical protein zj316_2328 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2969)%3B pfam11184 gene gene2638 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2639 SN35N_2640 SN35N_2640 rodA2 rodA2 2742019 2743224 + rod-shape determining protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~rod shape-determining protein RodA%3B TIGR02210%3B~rod-shape determining protein [Lactobacillus plantarum JDM1] gene gene2639 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2640 SN35N_2641 SN35N_2641 gcsH2 gcsH2 2743255 2743551 + glycine cleavage system%2C H protein glycine cleavage system%2C H protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoyl attachment site [posttranslational modification]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2640 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2641 SN35N_2642 SN35N_2642 metN2 metN2 2743919 2744950 + methionine import ATP-binding protein MetN 2 ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of methionine transporter%3B cd03258%3B~D-loop%3B~DL-methionine transporter ATP-binding subunit%3B provisional%3B PRK11153%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~methionine import ATP-binding protein MetN 2 [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~this domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins%3B smart00930%3B~walker A/P-loop%3B~walker B gene gene2641 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2642 SN35N_2643 SN35N_2643 SN35N_2643 2744943 2745635 + ABC transporter permease ABC transporter permease [Listeria monocytogenes]%3B~ABC-ATPase subunit interface%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative PBP binding loops gene gene2642 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2643 SN35N_2644 SN35N_2644 SN35N_2644 2745661 2746485 + lipoprotein NLPA lipoprotein%3B pfam03180%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2643 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2644 SN35N_2645 SN35N_2645 hicD3 hicD3 2746728 2747645 + L-2-hydroxyisocaproate dehydrogenase L-2-hydroxyisocaproate dehydrogenase [Lactobacillus plantarum ZJ316]%3B~L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases%3B cd05291%3B~L-lactate dehydrogenase%3B TIGR01771%3B~NAD binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~tetramer (dimer of dimers) interface [polypeptide binding] gene gene2644 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2645 SN35N_2646 SN35N_2646 SN35N_2646 2747844 2748818 + hypothetical protein hypothetical protein zj316_2321 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2785)%3B pfam10978 gene gene2645 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2646 SN35N_2647 SN35N_2647 SN35N_2647 2748840 2749868 + alcohol dehydrogenase%2C zinc-binding protein alcohol dehydrogenase%2C zinc-binding protein [Lactobacillus plantarum ZJ316]%3B~arginate lyase and other MDR family members%3B cd08252%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative NAD(P) binding site [chemical binding]%3B~zinc-binding alcohol dehydrogenase family protein%3B TIGR02817 gene gene2646 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2647 SN35N_2648 SN35N_2648 ddl ddl 2749970 2751082 + D-alanine--D-alanine ligase D-ala D-ala ligase C-terminus%3B pfam07478%3B~D-ala D-ala ligase N-terminus%3B pfam01820%3B~D-alanine--D-alanine ligase [Lactobacillus plantarum ZJ316]%3B~D-alanyl-alanine synthetase A%3B reviewed%3B PRK01966%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2647 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2648 SN35N_2649 SN35N_2649 glpQ3 glpQ3 2751158 2752717 + glycerophosphodiester phosphodiesterase catalytic site [active]%3B~glycerophosphodiester phosphodiesterase [Lactobacillus plantarum subsp. plantarum P-8]%3B~glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases%3B cd08579%3B~glycerophosphoryl diester phosphodiesterase [energy production and conversion]%3B COG0584%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative active site [active]%3B~putative metal binding site [ion binding] gene gene2648 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2649 SN35N_2650 SN35N_2650 SN35N_2650 2753167 2754063 + XRE family transcriptional regulator XRE family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene2649 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2650 SN35N_2651 SN35N_2651 bla2 bla2 2754181 2755311 + beta-lactamase%2C class A beta-lactamase enzyme family%3B pfam13354%3B~beta-lactamase%2C class A [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc-ribbon domain%3B pfam13240 gene gene2650 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2651 SN35N_2652 SN35N_2652 SN35N_2652 2755400 2755885 - nucleotide-binding protein identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~nucleotide-binding protein [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2651 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2652 SN35N_2653 SN35N_2653 SN35N_2653 2755949 2756233 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2652 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2653 SN35N_2654 SN35N_2654 SN35N_2654 2756864 2758144 - recombination factor protein RarA ATP binding site [chemical binding]%3B~MgsA AAA+ ATPase C terminal%3B pfam12002%3B~arginine finger%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~recombination factor protein RarA [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~recombination factor protein RarA%3B reviewed%3B~walker A motif%3B~walker B motif gene gene2653 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2654 SN35N_2655 SN35N_2655 gshAB gshAB 2758254 2760509 + glutathione biosynthesis bifunctional protein GshAB bifunctional glutamate--cysteine ligase/glutathione synthetase%3B provisional%3B~glutamate-cysteine ligase%3B cl17352%3B~glutathione biosynthesis bifunctional protein GshAB [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2654 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2655 SN35N_2656 SN35N_2656 cytR cytR 2760750 2761754 + DegA family transcriptional regulator DNA binding site [nucleotide binding]%3B~DegA family transcriptional regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species%3B cd06286%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative dimerization interface [polypeptide binding]%3B~putative ligand binding site [chemical binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene2655 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2656 SN35N_2657 SN35N_2657 SN35N_2657 2761810 2762277 + PTS family mannose/fructose/sorbose porter component IIB PTS family mannose/fructose/sorbose porter componen t IIB [Lactobacillus plantarum subsp. plantarum ST-III]%3B~PTS system sorbose subfamily IIB component%3B pfam03830%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphorylation site [posttranslational modification] gene gene2656 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2657 SN35N_2658 SN35N_2658 pts pts 2762295 2763092 + PTS family mannose/fructose/sorbose porter component IIC PTS family mannose/fructose/sorbose porter componen t IIC [Lactobacillus plantarum subsp. plantarum ST-III]%3B~PTS system sorbose-specific iic component%3B pfam03609%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2657 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2658 SN35N_2659 SN35N_2659 SN35N_2659 2763085 2763897 + PTS family mannose/fructose/sorbose porter component IID PTS family mannose/fructose/sorbose porter componen t IID [Lactobacillus plantarum subsp. plantarum ST-III]%3B~PTS system mannose/fructose/sorbose family IID component%3B pfam03613%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2658 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2659 SN35N_2660 SN35N_2660 SN35N_2660 2763914 2764330 + PTS family mannose/fructose/sorbose porter component IIA PTS family mannose/fructose/sorbose porter componen t IIA [Lactobacillus plantarum subsp. plantarum ST-III]%3B~active pocket/dimerization site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphorylation site [posttranslational modification] gene gene2659 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2660 SN35N_2661 SN35N_2661 SN35N_2661 2764323 2766017 + oligo-1%2C6-glucosidase Ca binding site [ion binding]%3B~alpha%2Calpha-phosphotrehalase%3B TIGR02403%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligo-1%2C6-glucosidase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2660 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2661 SN35N_2662 SN35N_2662 SN35N_2662 2766219 2766497 + transcription regulator%2C ArsR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcription regulator%2C ArsR family [Lactobacillus plantarum ZJ316] gene gene2661 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2662 SN35N_2663 SN35N_2663 SN35N_2663 2766494 2767123 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~protein of unknown function (DUF1648)%3B pfam07853 gene gene2662 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2663 SN35N_2664 SN35N_2664 SN35N_2664 2767179 2767643 - hypothetical protein hypothetical protein zj316_2309 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1694)%3B pfam07997 gene gene2663 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2664 SN35N_2665 SN35N_2665 SN35N_2665 2767777 2768403 + UPF0637 protein UPF0637 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1054)%3B pfam06335%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene2664 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2665 SN35N_2666 SN35N_2666 rpsD rpsD 2768462 2769070 - 30S ribosomal protein S4 30S ribosomal protein S4 [Lactobacillus amylovorus GRL 1112]%3B~30S ribosomal protein S4%3B validated%3B PRK05327%3B~COG0522 ribosomal protein S4 and related proteins%3B~RNA binding surface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~ribosomal protein S4/S9 N-terminal domain%3B pfam00163 gene gene2665 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2666 SN35N_2667 SN35N_2667 SN35N_2667 2769272 2769733 - signaling protein containing GAF domain GAF domain-containing protein [signal transduction mechanisms]%3B~GAF domain%3B pfam13185%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~signaling protein containing GAF domain [Lactobacillus plantarum ZJ316] gene gene2666 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2667 SN35N_2668 SN35N_2668 ezrA ezrA 2769905 2771626 + septation ring formation regulator EzrA Septation ring formation regulator%2C EzrA%3B pfam06160%3B~acts to negatively regulates ftsZ ring formation by modulating the frequency and position of the ftsZ ring formation%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~septation ring formation regulator EzrA [Lactobacillus plantarum JDM1] gene gene2667 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2668 SN35N_2669 SN35N_2669 SN35N_2669 2771699 2771899 + hypothetical protein hypothetical protein LPST_C1928 [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2668 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2669 SN35N_2670 SN35N_2670 SN35N_2670 2771938 2773092 + aminotransferase COG1104 cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes%3B~aminotransferase [Lactobacillus amylovorus GRL 1112 ]%3B~catalytic residue [active]%3B~cysteine desulfurase DndA%3B TIGR03235%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~pyridoxal 5'-phosphate binding pocket [chemical binding] gene gene2669 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2670 SN35N_2671 SN35N_2671 SN35N_2671 2773110 2774327 + thiamine biosynthesis protein ThiI COG0301 thiamine biosynthesis ATP pyrophosphatase%3B~THUMP domain%3B cl12076%3B~ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide%3B cd01712%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus amylovorus GRL 1112%3B~thiamine biosynthesis protein ThiI [Lactobacillus a mylovorus GRL 1112]%3B~thiamine biosynthesis protein ThiI%3B provisional gene gene2670 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2671 SN35N_2672 SN35N_2672 gshA gshA 2774532 2775770 + glutamate--cysteine ligase glutamate--cysteine ligase [Lactobacillus plantarum WCFS1]%3B~glutamate-cysteine ligase%3B cl17352%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2671 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2672 SN35N_2673 SN35N_2673 tpx tpx 2776010 2776504 + thiolperoxidase catalytic triad [active]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peroxidatic and resolving cysteines [active]%3B~thiolperoxidase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2672 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2673 SN35N_2674 SN35N_2674 SN35N_2674 2776828 2779497 + valyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~anticodon binding site%3B~anticodon-binding domain of valyl tRNA synthetases%3B cd07962%3B~catalytic core domain of valyl-tRNA synthetases%3B cd00817%3B~identified by MetaGeneAnnotator%3B putative%3B~leucyl-tRNA synthetase%2C domain 2%3B pfam13603%3B~nucleotide binding site [chemical binding]%3B~nucleotidyl transferase superfamily%3B cl00015%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~tRNA binding surface [nucleotide binding]%3B~valyl tRNA synthetase tRNA binding arm%3B pfam10458%3B~valyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~valyl-tRNA synthetase%3B reviewed%3B PRK05729 gene gene2673 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2674 SN35N_2675 SN35N_2675 folC1 folC1 2779671 2781005 + folylpolyglutamate synthase Mur ligase family%2C glutamate ligase domain%3B pfam02875%3B~Mur ligase middle domain%3B pfam08245%3B~folylpolyglutamate synthase [Lactobacillus plantarum JDM1]%3B~folylpolyglutamate synthase/dihydrofolate synthase%3B TIGR01499%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2674 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2675 SN35N_2676 SN35N_2676 radC radC 2781177 2781812 + DNA repair protein DNA repair protein [Lactobacillus plantarum ZJ316]%3B~MPN+ (JAMM) motif%3B~Mov34/MPN/PAD-1 family%3B cd08071%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~zinc-binding site [ion binding] gene gene2675 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2676 SN35N_2677 SN35N_2677 SN35N_2677 2782038 2783042 + rod shape-determining protein MreB COG1077 Actin-like ATPase involved in cell morphogenesis%3B~cell division protein FtsA%3B cl11496%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~rod shape-determining protein MreB [Lactobacillus a mylovorus GRL 1112]%3B~rod shape-determining protein MreB%3B provisional gene gene2676 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2677 SN35N_2678 SN35N_2678 mreC mreC 2783113 2783958 + cell shape-determining protein MreC cell shape-determining protein MreC [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rod shape-determining protein MreC%3B pfam04085%3B~rod shape-determining protein MreC%3B provisional gene gene2677 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2678 SN35N_2679 SN35N_2679 mreD mreD 2783971 2784489 + cell shape determining protein MreD cell shape determining protein MreD [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rod shape-determining protein MreD%3B TIGR03426 gene gene2678 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2679 SN35N_2680 SN35N_2680 minC minC 2784511 2785179 + septum site-determining protein MinC identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~septum formation inhibitor MinC%2C C-terminal domain%3B pfam03775%3B~septum formation inhibitor%3B reviewed%3B PRK00513%3B~septum site-determining protein MinC [Lactobacillus plantarum subsp. plantarum P-8] gene gene2679 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2680 SN35N_2681 SN35N_2681 SN35N_2681 2785179 2785985 + septum site-determining protein MinD derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~septum formation inhibitor-activating ATPase [cell division and chromosome partitioning]%3B COG2894%3B~septum site-determining protein MinD [Listeria monocytogenes] gene gene2680 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2681 SN35N_2682 SN35N_2682 SN35N_2682 2786465 2787106 + ABC-type amino acid transport system%2C permease component ABC-ATPase subunit interface%3B~ABC-type amino acid transport system%2C permease component [Lactobacillus gasseri ATCC 33323]%3B~ABC-type arginine transport system%2C permease component [amino acid transport and metabolism]%3B COG4215%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~putative PBP binding loops gene gene2681 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2682 SN35N_2683 SN35N_2683 SN35N_2683 2787119 2787760 + glutamine ABC transporter ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~COG1126 ABC-type polar amino acid transport system%2C ATPase component%3B~D-loop%3B~H-loop/switch region%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~Q-loop/lid%3B~glutamine ABC transporter [Lactobacillus amylovorus GRL 1112]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~walker A/P-loop%3B~walker B gene gene2682 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2683 SN35N_2684 SN35N_2684 glnH2 glnH2 2787773 2788612 + glutamine/histidine ABC transporter%2C substrate binding protein bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~glutamine/histidine ABC transporter%2C substrate binding protein [Lactobacillus plantarum ZJ316]%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding pocket [chemical binding] gene gene2683 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2684 SN35N_2685 SN35N_2685 isp2 isp2 2789628 2791310 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene2684 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2685 SN35N_2686 SN35N_2686 thrA2 thrA2 2791468 2792820 - aspartokinase ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII%3B cd04911%3B~ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII%3B cd04916%3B~allosteric regulatory residue%3B~aspartate kinase%3B reviewed%3B~aspartokinase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative aspartate binding site [chemical binding]%3B~putative catalytic residues [active]%3B~putative nucleotide binding site [chemical binding] gene gene2685 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2686 SN35N_2687 SN35N_2687 SN35N_2687 2793033 2794295 + non-proteolytic protein%2C peptidase family M16 identified by MetaGeneAnnotator%3B putative%3B~non-proteolytic protein%2C peptidase family M16 [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~peptidase M16 inactive domain%3B pfam05193 gene gene2686 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2687 SN35N_2688 SN35N_2688 SN35N_2688 2794292 2795593 + zinc-dependent proteinase identified by MetaGeneAnnotator%3B putative%3B~insulinase (peptidase family M16)%3B pfam00675%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~peptidase M16 inactive domain%3B pfam05193%3B~predicted Zn-dependent peptidases [general function prediction only]%3B COG0612%3B~zinc-dependent proteinase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2687 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2688 SN35N_2689 SN35N_2689 SN35N_2689 2795697 2796569 + Xre family transcriptional regulator Xre family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~domain of unknown function (DUF4115)%3B pfam13464%3B~helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted transcriptional regulator contains Xre-like HTH domain [function unknown]%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene2688 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2689 SN35N_2690 SN35N_2690 SN35N_2690 2796592 2797176 + phosphatidylglycerophosphate synthase CDP-alcohol phosphatidyltransferase%3B cl00453%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~phosphatidylglycerophosphate synthase [Lactobacillus gasseri ATCC 33323] gene gene2689 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2690 SN35N_2691 SN35N_2691 cinA cinA 2797448 2798776 + putative competence-damage inducible protein competence damage-inducible protein A%3B provisional%3B~competence-damaged protein%3B pfam02464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative MPT binding site%3B~putative competence-damage inducible protein [Lactobacillus plantarum ZJ316] gene gene2690 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2691 SN35N_2692 SN35N_2692 recA recA 2798803 2799945 + recombinase A ATP binding site [chemical binding]%3B~RecA is a bacterial enzyme which has roles in homologous recombination%2C DNA repair%2C and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange%3B cd00983%3B~hexamer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~recombinase A [Lactobacillus gasseri ATCC 33323]%3B~recombinase A%3B provisional%3B PRK09354%3B~walker A motif%3B~walker B motif gene gene2691 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2692 SN35N_2693 SN35N_2693 SN35N_2693 2800176 2801735 + ribonuclease Mg2+ binding site [ion binding]%3B~Zn2+ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~organism:Listeria monocytogenes%3B~phosphodiesterase%3B provisional%3B~protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~ribonuclease [Listeria monocytogenes] gene gene2692 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2693 SN35N_2694 SN35N_2694 SN35N_2694 2801860 2802666 + metallophosphatase (MPP) superfamily protein Deinococcus radiodurans DR1281 and related proteins%2C metallophosphatase domain%3B cd07382%3B~calcineurin-like phosphoesterase%3B pfam00149%3B~homodimer binding site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metallophosphatase (MPP) superfamily protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active] gene gene2693 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2694 SN35N_2695 SN35N_2695 SN35N_2695 2802694 2805384 + DNA mismatch repair protein mutS ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~D-loop%3B~DNA mismatch repair protein MutS%3B provisional%3B~DNA mismatch repair protein mutS [Enterococcus casseliflavus EC20]%3B~H-loop/switch region%3B~MutS domain I%3B pfam01624%3B~MutS domain II%3B pfam05188%3B~MutS family domain IV%3B pfam05190%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~walker A/P-loop%3B~walker B gene gene2694 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2695 SN35N_2696 SN35N_2696 mutL mutL 2805552 2807588 + DNA mismatch repair protein MutL ATP binding site [chemical binding]%3B~DNA mismatch repair enzyme (predicted ATPase) [DNA replication%2C recombination%2C and repair]%3B COG0323%3B~DNA mismatch repair protein MutL [Lactobacillus plantarum ZJ316]%3B~G-X-G motif%3B~Mg2+ binding site [ion binding]%3B~MutL C terminal dimerisation domain%3B pfam08676%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2695 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2696 SN35N_2697 SN35N_2697 SN35N_2697 2808696 2809034 + hypothetical protein hypothetical protein zj316_2273 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2696 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2697 SN35N_2698 SN35N_2698 SN35N_2698 2809188 2812256 + integral membrane protein bacterial membrane protein YfhO%3B pfam09586%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2697 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2698 SN35N_2699 SN35N_2699 SN35N_2699 2812386 2812907 - hypothetical protein hypothetical protein zj316_2271 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1015)%3B pfam06245 gene gene2698 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2699 SN35N_2700 SN35N_2700 ruvA ruvA 2813108 2813719 + holliday junction DNA helicase RuvA RuvA N terminal domain%3B pfam01330%3B~holliday junction DNA helicase RuvA [Lactobacillus plantarum subsp. plantarum P-8]%3B~holliday junction DNA helicase RuvA%3B reviewed%3B PRK00116%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2699 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2700 SN35N_2701 SN35N_2701 ruvB ruvB 2813737 2814747 + holliday junction ATP-dependent DNA helicase RuvB ATP binding site [chemical binding]%3B~arginine finger%3B~holliday junction ATP-dependent DNA helicase RuvB [Lactobacillus plantarum ZJ316]%3B~holliday junction DNA helicase RuvB%3B reviewed%3B PRK00080%3B~holliday junction DNA helicase ruvB C-terminus%3B pfam05491%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A motif%3B~walker B motif gene gene2700 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2701 SN35N_2702 SN35N_2702 queA queA 2814765 2815799 + S-adenosylmethionine:tRNA ribosyltransferase-isomerase S-adenosylmethionine:tRNA ribosyltransferase-isomer ase [Streptococcus pneumoniae 670-6B]%3B~S-adenosylmethionine:tRNA ribosyltransferase-isomerase%3B provisional%3B PRK00147%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B%3B~queuosine biosynthesis protein%3B cl00523 gene gene2701 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2702 SN35N_2703 SN35N_2703 SN35N_2703 2816109 2817251 + queuine tRNA-ribosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~queuine tRNA-ribosyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~queuine tRNA-ribosyltransferase%3B provisional%3B cl00409%3B~tRNA-guanine transglycosylases%2C various specificities%3B TIGR00449 gene gene2702 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2703 SN35N_2704 SN35N_2704 yajC yajC 2817329 2817712 + preprotein translocase%2C YajC subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~preprotein translocase subunit%3B pfam02699%3B~preprotein translocase%2C YajC subunit [Lactobacillus plantarum ZJ316] gene gene2703 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2704 SN35N_2705 SN35N_2705 dinB dinB 2817842 2818975 + DNA polymerase IV DNA binding site [nucleotide binding]%3B~DNA polymerase IV [Lactobacillus plantarum ZJ316]%3B~DNA polymerase IV/Kappa%3B cd03586%3B~DNA polymerase IV%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2704 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2705 SN35N_2706 SN35N_2706 SN35N_2706 2819068 2820024 + phosphoesterase%2C DHH family DHH family%3B pfam01368%3B~DHHA1 domain%3B pfam02272%3B~exopolyphosphatase-related proteins [general function prediction only]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoesterase%2C DHH family [Lactobacillus plantarum ZJ316] gene gene2705 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2706 SN35N_2707 SN35N_2707 rhe3 rhe3 2820027 2821370 + ATP-dependent RNA helicase ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent RNA helicase [Lactobacillus plantarum subsp. plantarum P-8]%3B~DEAD-like helicases superfamily%3B smart00487%3B~Mg++ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~motif III%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2706 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2707 SN35N_2708 SN35N_2708 SN35N_2708 2821698 2824340 + alanyl-tRNA synthetase DHHA1 domain%3B pfam02272%3B~alanyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~alanyl-tRNA synthetase%3B reviewed%3B PRK00252%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~threonyl and alanyl tRNA synthetase second additional domain%3B smart00863 gene gene2707 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2708 SN35N_2709 SN35N_2709 SN35N_2709 2824727 2824996 + UPF0297 protein UPF0297 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2708 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2709 SN35N_2710 SN35N_2710 SN35N_2710 2824993 2825427 + holliday junction resolvase-like protein holliday junction resolvase-like protein [Streptoco ccus agalactiae NEM316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus agalactiae NEM316%3B~similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function gene gene2709 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2710 SN35N_2711 SN35N_2711 SN35N_2711 2825440 2825736 + UPF0473 protein UPF0473 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2710 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2711 SN35N_2712 SN35N_2712 zapA zapA 2825868 2826119 + cell-division Z-ring component%2C stimulator of FtsZ polymerization cell division protein ZapA%3B cl01146%3B~cell-division Z-ring component%2C stimulator of FtsZ polymerization [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2711 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2712 SN35N_2713 SN35N_2713 mutS mutS 2826179 2828542 + DNA mismatch repair protein MutS2 ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~DNA mismatch repair protein MutS2 [Lactobacillus plantarum JDM1]%3B~H-loop/switch region%3B~MutS domain III%3B pfam05192%3B~Q-loop/lid%3B~Smr domain%3B pfam01713%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~recombination and DNA strand exchange inhibitor protein%3B reviewed%3B~walker A/P-loop%3B~walker B gene gene2712 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2713 SN35N_2714 SN35N_2714 SN35N_2714 2828698 2829009 + thioredoxin catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290%3B~thioredoxin [Lactobacillus brevis KB290]%3B~thioredoxin-like%3B pfam13905 gene gene2713 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2714 SN35N_2715 SN35N_2715 SN35N_2715 2829177 2829698 - hypothetical protein hypothetical protein zj316_2253 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2507)%3B pfam10702 gene gene2714 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2715 SN35N_2716 SN35N_2716 SN35N_2716 2829898 2830719 + glutamate racemase glutamate racemase [Lactobacillus rhamnosus GG]%3B~glutamate racemase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2715 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2716 SN35N_2717 SN35N_2717 SN35N_2717 2830712 2831320 + non-canonical purine NTP pyrophosphatase dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~non-canonical purine NTP pyrophosphatase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2716 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2717 SN35N_2718 SN35N_2718 SN35N_2718 2831317 2831835 + phosphoesterase Escherichia coli YfcE and related proteins%2C metallophosphatase domain%3B cd00841%3B~homotetramer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphoesterase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2717 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2718 SN35N_2719 SN35N_2719 SN35N_2719 2831923 2832414 + CBS domain-containing protein CBS domain-containing protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2718 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2719 SN35N_2720 SN35N_2720 SN35N_2720 2832433 2833143 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succin yltransferase [Listeria monocytogenes]%3B~2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase%3B TIGR03532%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~tetrahydrodipicolinate succinyltransferase N-terminal%3B pfam08503 gene gene2719 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2720 SN35N_2721 SN35N_2721 SN35N_2721 2833161 2834315 + N-acetyldiaminopimelate deacetylase M20 peptidase aminoacyclase-1 YkuR-like proteins%2C including YkuR and Ama/HipO/HyuC proteins%3B cd05670%3B~N-acetyldiaminopimelate deacetylase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metal-dependent amidase/aminoacylase/carboxypeptidase [general function prediction only]%3B COG1473%3B~organism:Lactobacillus plantarum ZJ316%3B~putative dimer interface [polypeptide binding] gene gene2720 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2721 SN35N_2722 SN35N_2722 SN35N_2722 2834583 2835476 - mechanosensitive ion channel family protein identified by MetaGeneAnnotator%3B putative%3B~mechanosensitive ion channel family protein [Lactobacillus plantarum ZJ316]%3B~mechanosensitive ion channel%3B pfam00924%3B~organism:Lactobacillus plantarum ZJ316%3B~small-conductance mechanosensitive channel [cell envelope biogenesis%2C outer membrane]%3B COG0668 gene gene2721 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2722 SN35N_2723 SN35N_2723 SN35N_2723 2835665 2836081 + hypothetical protein bacterial protein of unknown function (DUF948)%3B pfam06103%3B~hypothetical protein zj316_2245 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2722 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2723 SN35N_2724 SN35N_2724 SN35N_2724 2836084 2836596 + extracellular protein extracellular protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2723 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2724 SN35N_2725 SN35N_2725 SN35N_2725 2836666 2837127 + transcription regulator%2C MerR family DNA binding residues [nucleotide binding]%3B~helix-turn-helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB%3B cd01109%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B COG0789%3B~putative dimer interface [polypeptide binding]%3B~transcription regulator%2C MerR family [Lactobacillus plantarum ZJ316] gene gene2724 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2725 SN35N_2726 SN35N_2726 pepQ pepQ 2837213 2838322 - Xaa-Pro dipeptidase Xaa-Pro aminopeptidase [amino acid transport and metabolism]%3B COG0006%3B~Xaa-Pro dipeptidase [Lactobacillus plantarum JDM1]%3B~creatinase/prolidase N-terminal domain%3B pfam01321%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2725 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2726 SN35N_2727 SN35N_2727 SN35N_2727 2838586 2839596 + catabolite control protein A DNA binding site [nucleotide binding]%3B~catabolite control protein A [Lactobacillus rhamnos us GG]%3B~catabolite control protein A%3B TIGR01481%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~effector binding site%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand-binding domain of the catabolite control protein A (CcpA)%2C which functions as the major transcriptional regulator of carbon catabolite repression/regulation%3B cd06298%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2726 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2727 SN35N_2728 SN35N_2728 SN35N_2728 2839719 2840591 + hypothetical protein hypothetical protein zj316_2239 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~sugar phosphate isomerases/epimerases [carbohydrate transport and metabolism]%3B COG1082 gene gene2727 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2728 SN35N_2729 SN35N_2729 SN35N_2729 2840584 2840904 + hypothetical protein DsrE/DsrF-like family%3B cl00672%3B~hypothetical protein zj316_2238 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2728 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2729 SN35N_2730 SN35N_2730 SN35N_2730 2841122 2841850 + YebC/PmpR family DNA-binding regulatory protein YebC/PmpR family DNA-binding regulatory protein [Lactobacillus plantarum WCFS1]%3B~hypothetical protein%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2729 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2730 SN35N_2731 SN35N_2731 rbsK2 rbsK2 2841987 2842907 + ribokinase ATP binding site [chemical binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribokinase [Lactobacillus plantarum ZJ316]%3B~substrate binding site [chemical binding]%3B~sugar kinases%2C ribokinase family [carbohydrate transport and metabolism]%3B COG0524 gene gene2730 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2731 SN35N_2732 SN35N_2732 gspE gspE 2843107 2844081 + bacterial type II secretion/trafficking system protein E%2C ATPase ATP binding site [chemical binding]%3B~bacterial type II secretion/trafficking system protein E%2C ATPase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~type II/IV secretion system protein%3B pfam00437%3B~walker A motif%3B~walker B motif gene gene2731 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2732 SN35N_2733 SN35N_2733 comGB comGB 2844020 2845066 + ComG operon protein 2 ComG operon protein 2 [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~type II secretion system (T2SS)%2C protein F%3B pfam00482 gene gene2732 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2733 SN35N_2734 SN35N_2734 comGC comGC 2845063 2845419 + ComG operon protein 3 ComG operon protein 3 [Lactobacillus plantarum subsp. plantarum P-8]%3B~competence protein ComGC [intracellular trafficking and secretion]%3B COG4537%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prepilin-type N-terminal cleavage/methylation domain%3B TIGR02532 gene gene2733 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2734 SN35N_2735 SN35N_2735 SN35N_2735 2845412 2845882 + bacterial type II secretion/trafficking system extracellular protein bacterial type II secretion/trafficking system extr acellular protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2734 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2735 SN35N_2736 SN35N_2736 SN35N_2736 2845875 2846060 + sensory box protein/response regulator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~sensory box protein/response regulator [Lactobacillus plantarum 16] gene gene2735 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2736 SN35N_2737 SN35N_2737 SN35N_2737 2846053 2846541 + bacterial type II secretion/trafficking system protein bacterial type II secretion/trafficking system protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2736 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2737 SN35N_2738 SN35N_2738 SN35N_2738 2846744 2847763 + type I restriction-modification system%2C adenine-specific methyltransferase subunit S-adenosylmethionine binding site [chemical binding]%3B~adenine-specific DNA methylase [DNA replication%2C recombination%2C and repair]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase domain%3B pfam13659%3B~organism:Lactobacillus plantarum ZJ316%3B~type I restriction-modification system%2Cadenine-spec ific methyltransferase subunit [Lactobacillus plantarum ZJ316] gene gene2737 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2738 SN35N_2739 SN35N_2739 ackA ackA 2847775 2848968 + acetate kinase acetate kinase A/propionate kinase 2%3B reviewed%3B~acetate kinase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~propionate/acetate kinase%3B provisional gene gene2738 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2739 SN35N_2740 SN35N_2740 SN35N_2740 2848931 2849122 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2739 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2740 SN35N_2741 SN35N_2741 SN35N_2741 2849288 2850673 + APC family amino acid-polyamine-organocation transporter APC family amino acid-polyamine-organocation transporter [Lactobacillus plantarum subsp. plantarum ST-III]%3B~gamma-aminobutyrate permease and related permeases [amino acid transport and metabolism]%3B COG1113%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2740 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2741 SN35N_2742 SN35N_2742 SN35N_2742 2851189 2851797 + metallophosphatase Aquifex aeolicus AQ1575 and related proteins%2C metallophosphatase domain%3B cd07390%3B~identified by MetaGeneAnnotator%3B putative%3B~metallophosphatase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active]%3B~putative metal binding site [ion binding] gene gene2741 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2742 SN35N_2743 SN35N_2743 SN35N_2743 2851867 2853252 + 5'-nucleotidase 5'-nucleotidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~5'-nucleotidase%2C C-terminal domain%3B pfam02872%3B~5'-nucleotidase/2'%2C3'-cyclic phosphodiesterase and related esterases [nucleotide transport and metabolism]%3B COG0737%3B~Escherichia coli UshA-like family%2C N-terminal metallophosphatase domain%3B cd00845%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2742 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2743 SN35N_2744 SN35N_2744 SN35N_2744 2853271 2853900 + hypothetical protein hypothetical protein zj316_2223 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1027)%3B pfam06265 gene gene2743 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2744 SN35N_2745 SN35N_2745 SN35N_2745 2853922 2854713 + hydrolase%2C HAD superfamily HAD-superfamily subfamily IIA hydrolase%2C TIGR01457%3B~hydrolase%2C HAD superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2744 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2745 SN35N_2746 SN35N_2746 SN35N_2746 2854697 2855338 + hypothetical membrane protein hypothetical membrane protein%2C DUF1461 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1461)%3B pfam07314 gene gene2745 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2746 SN35N_2747 SN35N_2747 SN35N_2747 2855429 2856085 - membrane protein SNARE associated Golgi protein%3B cl00429%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized membrane-associated protein [function unknown]%3B COG0586 gene gene2746 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2747 SN35N_2748 SN35N_2748 SN35N_2748 2856249 2856833 + peptidyl-prolyl cis-trans isomerase COG0652 peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112%3B~peptidyl-prolyl cis-trans isomerase B (rotamase B)%3B provisional%3B~peptidyl-prolyl cis-trans isomerase [Lactobacillus amylovorus GRL 1112] gene gene2747 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2748 SN35N_2749 SN35N_2749 SN35N_2749 2856969 2857370 + RNA-binding protein%2C S1-type RNA binding site [nucleotide binding]%3B~RNA-binding protein%2C S1-type [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted RNA binding protein (contains ribosomal protein S1 domain) [translation%2C ribosomal structure and biogenesis]%3B COG1098 gene gene2748 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2749 SN35N_2750 SN35N_2750 SN35N_2750 2857370 2857750 + hypothetical protein hypothetical protein zj316_2217 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2749 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2750 SN35N_2751 SN35N_2751 SN35N_2751 2865567 2866067 - hypothetical protein antibiotic biosynthesis monooxygenase%3B cl10022%3B~hypothetical protein zj316_2216 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2750 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2751 SN35N_2752 SN35N_2752 SN35N_2752 2866208 2866951 + metal-dependent hydrolase%2C beta-lactamase superfamily III identified by MetaGeneAnnotator%3B putative%3B~metal-dependent hydrolase%2C beta-lactamase superfamily III [Lactobacillus plantarum ZJ316]%3B~metal-dependent hydrolases of the beta-lactamase superfamily III [general function prediction only]%3B COG1234%3B~organism:Lactobacillus plantarum ZJ316 gene gene2751 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2752 SN35N_2753 SN35N_2753 SN35N_2753 2867238 2867636 + ArsR family transcriptional regulator ArsC family%3B pfam03960%3B~ArsR family transcriptional regulator [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~putative catalytic residues [active]%3B~thiol/disulfide switch gene gene2752 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2753 SN35N_2754 SN35N_2754 mecA mecA 2867772 2868503 + adapter protein MecA adapter protein MecA [Lactobacillus plantarum ZJ316]%3B~adaptor protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2753 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2754 SN35N_2755 SN35N_2755 coiA coiA 2868690 2869775 + competence protein competence protein CoiA-like family%3B cl11541%3B~competence protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2754 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2755 SN35N_2756 SN35N_2756 pepF1 pepF1 2869853 2871664 + oligoendopeptidase F Zn binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligoendopeptidase F [Lactobacillus plantarum JDM1]%3B~oligoendopeptidase F%3B TIGR00181%3B~organism:Lactobacillus plantarum JDM1%3B~peptidase family M3B Oligopeptidase F (PepF)%3B cd09608 gene gene2755 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2756 SN35N_2757 SN35N_2757 SN35N_2757 2871879 2872514 - dithiol-disulfide isomerase catalytic residues [active]%3B~dithiol-disulfide isomerase%2C DsbA family%2CFrnE-like subfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2756 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2757 SN35N_2758 SN35N_2758 SN35N_2758 2872807 2873469 + GTP pyrophosphokinase GTP pyrophosphokinase [Listeria monocytogenes]%3B~NTP binding site [chemical binding]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases%3B cd05399%3B~organism:Listeria monocytogenes%3B~synthetase active site [active] gene gene2757 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2758 SN35N_2759 SN35N_2759 SN35N_2759 2873466 2874269 + inorganic polyphosphate/ATP-NAD kinase diacylglycerol kinase catalytic domain%3B cl01255%3B~identified by MetaGeneAnnotator%3B putative%3B~inorganic polyphosphate/ATP-NAD kinase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2758 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2759 SN35N_2760 SN35N_2760 rluD2 rluD2 2874266 2875168 + pseudouridylate synthase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~pseudouridine synthase%2C RsuA/RluD family%3B cd02869%3B~pseudouridylate synthase [Lactobacillus plantarum JDM1]%3B~pseudouridylate synthases%2C 23S RNA-specific [translation%2C ribosomal structure and biogenesis]%3B COG0564 gene gene2759 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2760 SN35N_2761 SN35N_2761 cutC cutC 2875422 2876060 - copper homeostasis protein copper homeostasis protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~uncharacterized protein involved in copper resistance [inorganic ion transport and metabolism]%3B COG3142 gene gene2760 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2761 SN35N_2762 SN35N_2762 SN35N_2762 2876076 2877095 - 6-phosphogluconolactonase 6-phosphogluconolactonase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~lactonase%2C 7-bladed beta-propeller%3B pfam10282%3B~organism:Lactobacillus plantarum WCFS1 gene gene2761 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2762 SN35N_2763 SN35N_2763 pts17A pts17A 2877227 2877586 + PTS system%2C glucitol/sorbitol-specific EIIA component PTS system glucitol/sorbitol-specific IIA component%3B cl01516%3B~PTS system%2C glucitol/sorbitol-specific EIIA component [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2762 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2763 SN35N_2764 SN35N_2764 SN35N_2764 2877601 2878755 + transport protein domain of unknown function DUF20%3B pfam01594%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted permease%2C member of the PurR regulon [general function prediction only]%3B COG0628%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene2763 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2764 SN35N_2765 SN35N_2765 SN35N_2765 2878917 2879186 - 30S ribosomal protein S14 30S ribosomal protein S14 [Listeria monocytogenes]%3B~30S ribosomal protein S14%3B reviewed%3B PRK08881%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2764 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2765 SN35N_2766 SN35N_2766 rrmA rrmA 2879453 2880307 + rRNA large subunit methyltransferase A 23S rRNA methyltransferase A%3B provisional%3B PRK11088%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~rRNA large subunit methyltransferase A [Lactobacillus plantarum subsp. plantarum P-8] gene gene2765 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2766 SN35N_2767 SN35N_2767 brnQ2 brnQ2 2880655 2882004 - branched-chain amino acid transport protein branched-chain amino acid transport protein [Lactobacillus plantarum JDM1]%3B~branched-chain amino acid transport protein%3B pfam05525%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2766 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2767 SN35N_2768 SN35N_2768 SN35N_2768 2882339 2882986 - NADH-flavin reductase NAD binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~NADH-flavin reductase [Lactobacillus plantarum ZJ316]%3B~biliverdin IX beta reductase (BVR-B%2C aka flavin reductase)-like proteins%3B atypical (a) SDRs%3B cd05244%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative active site [active]%3B~substrate binding site [chemical binding] gene gene2767 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2768 SN35N_2769 SN35N_2769 SN35N_2769 2883278 2883790 + rRNA methylase SpoU rRNA methylase family%3B cl00362%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~rRNA methylase [Lactobacillus gasseri ATCC 33323] gene gene2768 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2769 SN35N_2770 SN35N_2770 ftsK2 ftsK2 2883903 2886290 + cell division protein FtsK DNA segregation ATPase FtsK/SpoIIIE and related proteins [cell division and chromosome partitioning]%3B COG1674%3B~FtsK/SpoIIIE family%3B pfam01580%3B~Ftsk gamma domain%3B pfam09397%3B~cell division protein FtsK [Lactobacillus plantarum subsp. plantarum ST-III]%3B~domain of unknown function (DUF4117)%3B pfam13491%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2769 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2770 SN35N_2771 SN35N_2771 SN35N_2771 2886795 2887754 - Mg2+ and Co2+ transport protein Cl binding site [ion binding]%3B~CorA-like Mg2+ transporter protein%3B pfam01544%3B~Mg2+ and Co2+ transport protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomer interface [polypeptide binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family%3B cd12827 gene gene2770 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2771 SN35N_2772 SN35N_2772 SN35N_2772 2887870 2888238 + hypothetical membrane protein hypothetical membrane protein%2C DUF3397 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF3397)%3B pfam11877 gene gene2771 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2772 SN35N_2773 SN35N_2773 mraZ mraZ 2888396 2888833 + protein mraZ MraZ protein%3B pfam02381%3B~cell division protein MraZ%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein mraZ [Lactobacillus plantarum subsp. plantarum P-8] gene gene2772 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2773 SN35N_2774 SN35N_2774 SN35N_2774 2888867 2889826 + 16S rRNA methyltransferase 16S rRNA methyltransferase [Listeria monocytogenes]%3B~MraW methylase family%3B pfam01795%3B~catalyzes the methylation of the N4 position of C1402 on the 16S rRNA%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [cell envelope biogenesis%2C outer membrane] gene gene2773 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2774 SN35N_2775 SN35N_2775 ftsL ftsL 2889857 2890243 + cell division protein FtsL cell division protein FtsL [Lactobacillus plantarum ZJ316]%3B~cell division protein FtsL%3B TIGR02209%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2774 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2775 SN35N_2776 SN35N_2776 pbp2B pbp2B 2890240 2892381 + transpeptidase%2C penicillin binding protein 2B cell division protein FtsI/penicillin-binding protein 2 [cell envelope biogenesis%2C outer membrane]%3B COG0768%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~penicillin binding protein transpeptidase domain%3B pfam00905%3B~penicillin-binding protein dimerisation domain%3B pfam03717%3B~transpeptidase%2C penicillin binding protein 2B [Lactobacillus plantarum ZJ316] gene gene2775 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2776 SN35N_2777 SN35N_2777 SN35N_2777 2892410 2893375 + phospho-N-acetylmuramoyl-pentapeptide-transferase Mg++ binding site [ion binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phospho-N-acetylmuramoyl-pentapeptide-transferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~phospho-N-acetylmuramoyl-pentapeptide-transferase%3B provisional%3B PRK00108%3B~putative catalytic motif [active]%3B~putative substrate binding site [chemical binding] gene gene2776 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2777 SN35N_2778 SN35N_2778 SN35N_2778 2893656 2895035 + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Mur ligase family%2C glutamate ligase domain%3B pfam02875%3B~Mur ligase middle domain%3B pfam08245%3B~UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetas e [Lactobacillus rhamnosus GG]%3B~UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase%3B provisional%3B PRK02472%3B~alanine dehydrogenase/PNT%2C C-terminal domain%3B smart01002%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2777 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2778 SN35N_2779 SN35N_2779 murG murG 2895035 2896126 + UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase UDP diphospho-muramoyl pentapeptide beta-N acetylgl ucosaminyl transferase [Lactobacillus plantarum JDM1]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase%3B provisional%3B PRK00726 gene gene2778 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2779 SN35N_2780 SN35N_2780 divIB divIB 2896157 2897032 + cell division protein DivIB POTRA domain%2C FtsQ-type%3B pfam08478%3B~cell division protein DivIB [Lactobacillus plantarum ZJ316]%3B~cell division protein FtsQ%3B pfam03799%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2779 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2780 SN35N_2781 SN35N_2781 SN35N_2781 2897149 2898495 + cell division protein FtsA cell division ATPase FtsA [cell division and chromosome partitioning]%3B COG0849%3B~cell division protein FtsA [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~cell division protein FtsA%3B cl11496%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2780 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2781 SN35N_2782 SN35N_2782 SN35N_2782 2898525 2899808 + cell division protein FtsZ SulA interaction site%3B~cell division protein FtsZ [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~cell division protein FtsZ%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2781 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2782 SN35N_2783 SN35N_2783 sepF sepF 2899832 2900254 + cell division protein SepF cell division protein SepF [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF552)%3B cl00775 gene gene2782 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2783 SN35N_2784 SN35N_2784 SN35N_2784 2900258 2900527 + cell division protein YGGT family%3B pfam02325%3B~cell division protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2783 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2784 SN35N_2785 SN35N_2785 SN35N_2785 2900551 2901336 + cell division protein%2C RNA-binding S4 domain-containing protein cell division protein%2C RNA-binding S4 domain-contai ning protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein%2C contains S4-like domain [function unknown] gene gene2784 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2785 SN35N_2786 SN35N_2786 divIVA divIVA 2901354 2902052 + cell division initiation protein DivIVA DivIVA domain%3B TIGR03544%3B~DivIVA protein%3B pfam05103%3B~cell division initiation protein DivIVA [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2785 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2786 SN35N_2787 SN35N_2787 SN35N_2787 2902366 2905164 + isoleucyl-tRNA synthetase HIGH motif%3B~KMSKS motif%3B~anticodon binding site%3B~anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases%3B cd07960%3B~catalytic core domain of isoleucyl-tRNA synthetases%3B cd00818%3B~identified by MetaGeneAnnotator%3B putative%3B~isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~isoleucyl-tRNA synthetase%3B reviewed%3B PRK05743%3B~leucyl-tRNA synthetase%2C domain 2%3B pfam13603%3B~nucleotide binding site [chemical binding]%3B~nucleotidyl transferase superfamily%3B cl00015%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~tRNA binding surface [nucleotide binding]%3B~zinc finger found in FPG and IleRS%3B pfam06827 gene gene2786 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2787 SN35N_2788 SN35N_2788 SN35N_2788 2905597 2906325 + ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~daunorubicin resistance ABC transporter ATP-binding subunit%3B TIGR01188%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker B gene gene2787 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2788 SN35N_2789 SN35N_2789 SN35N_2789 2906326 2907192 + ABC transporter%2C integral membrane protein ABC transporter%2C integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ABC-type multidrug transport system%2C permease component [defense mechanisms]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2788 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2789 SN35N_2790 SN35N_2790 SN35N_2790 2907208 2907666 + LytTr family transcriptional regulator LytTr DNA-binding domain%3B smart00850%3B~LytTr family transcriptional regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2789 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2790 SN35N_2791 SN35N_2791 SN35N_2791 2907677 2908081 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene2790 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2791 SN35N_2792 SN35N_2792 dapF dapF 2908276 2909268 + diaminopimelate epimerase diaminopimelate epimerase [Lactobacillus plantarum ZJ316]%3B~diaminopimelate epimerase%3B pfam01678%3B~diaminopimelate epimerase%3B provisional%3B PRK00450%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2791 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2792 SN35N_2793 SN35N_2793 SN35N_2793 2909463 2910017 + ADP-ribose pyrophosphatase ADP-ribose binding site [chemical binding]%3B~ADP-ribose pyrophosphatase [Lactobacillus plantarum ZJ316]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~nudix motif%3B~organism:Lactobacillus plantarum ZJ316 gene gene2792 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2793 SN35N_2794 SN35N_2794 SN35N_2794 2910017 2910268 + hypothetical protein hypothetical protein zj316_2174 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2793 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2794 SN35N_2795 SN35N_2795 mtn mtn 2910289 2910981 + methylthioadenosine nucleosidase%3B S-adenosylhomocysteine nucleosidase 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase%3B TIGR01704%3B~5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~methylthioadenosine nucleosidase%3B S-adenosylhomocys teine nucleosidase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2794 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2795 SN35N_2796 SN35N_2796 SN35N_2796 2911040 2912200 + cysteine desulfurase catalytic residue [active]%3B~cysteine desulfurase DndA%3B TIGR03235%3B~cysteine desulfurase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~pyridoxal 5'-phosphate binding pocket [chemical binding] gene gene2795 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2796 SN35N_2797 SN35N_2797 SN35N_2797 2912203 2912544 + cysteine desulfurase associated protein cysteine desulfurase associated protein%2CDUF1831 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative amino acid metabolism%3B pfam08866 gene gene2796 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2797 SN35N_2798 SN35N_2798 mnmA mnmA 2912661 2913785 + tRNA-specific 2-thiouridylase mnmA identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~tRNA methyl transferase%3B pfam03054%3B~tRNA-specific 2-thiouridylase mnmA [Lactobacillus plantarum subsp. plantarum P-8] gene gene2797 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2798 SN35N_2799 SN35N_2799 ktrB ktrB 2913981 2915333 + potassium uptake protein Trk-type K+ transport systems%2C membrane components [inorganic ion transport and metabolism]%3B COG0168%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~potassium uptake protein [Lactobacillus plantarum ZJ316]%3B~potassium uptake protein%2C TrkH family%3B TIGR00933 gene gene2798 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2799 SN35N_2800 SN35N_2800 ktrA ktrA 2915343 2916005 + potassium uptake protein K+ transport systems%2C NAD-binding component [inorganic ion transport and metabolism]%3B COG0569%3B~TrkA-C domain%3B pfam02080%3B~TrkA-N domain%3B pfam02254%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~potassium uptake protein [Lactobacillus plantarum ZJ316] gene gene2799 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2800 SN35N_2801 SN35N_2801 SN35N_2801 2916287 2916973 + cell surface protein%2C CscC family WxL domain surface cell wall-binding%3B pfam13731%3B~cell surface protein%2C CscC family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2800 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2801 SN35N_2802 SN35N_2802 SN35N_2802 2917077 2918111 + cell surface protein precursor bacterial protein of unknown function (DUF916)%3B pfam06030%3B~cell surface protein precursor [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~protein of unknown function C-terminal (DUF3324)%3B pfam11797 gene gene2801 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2802 SN35N_2803 SN35N_2803 SN35N_2803 2918118 2919566 + cell surface protein%2C CscB family WxL domain surface cell wall-binding%3B pfam13731%3B~bacterial surface proteins containing Ig-like domains [cell motility and secretion]%3B~cell surface protein%2C CscB family [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2802 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2803 SN35N_2804 SN35N_2804 pgm6 pgm6 2920090 2920755 + phosphoglycerate mutase family protein catalytic core [active]%3B~histidine phosphatase domain found in phosphoglycerate mutases and related proteins%2C mostly phosphatases%3B contains a His residue which is phosphorylated during the reaction%3B cd07067%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphoglycerate mutase family protein [Lactobacillus plantarum ZJ316] gene gene2803 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2804 SN35N_2805 SN35N_2805 SN35N_2805 2920776 2921450 + hypothetical protein TPR motif%3B~binding surface%3B~hypothetical protein zj316_2162 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2804 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2805 SN35N_2806 SN35N_2806 SN35N_2806 2921466 2924015 + exodeoxyribonuclease V alpha chain AAA domain%3B pfam13604%3B~exodeoxyribonuclease V%2C alpha chain [Lactobacillus plantarum 16]%3B~family description%3B pfam13538%3B~helicase%2C putative%2C RecD/TraA family%3B TIGR01448%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2805 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2806 SN35N_2807 SN35N_2807 prs2 prs2 2924170 2925135 + ribose-phosphate pyrophosphokinase N-terminal domain of ribose phosphate pyrophosphokinase%3B pfam13793%3B~catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223%3B~ribose-phosphate pyrophosphokinase [Lactobacillus plantarum JDM1]%3B~ribose-phosphate pyrophosphokinase%3B provisional gene gene2806 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2807 SN35N_2808 SN35N_2808 SN35N_2808 2925495 2926985 + gamma-D-glutamate-meso-diaminopimelate muropeptidase NlpC/P60 family%3B pfam00877%3B~cell wall-associated hydrolases (invasion-associated proteins) [cell envelope biogenesis%2C outer membrane]%3B COG0791%3B~extracellular protein%2C gamma-D-glutamate-meso-diaminopimelate muropeptidase[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2807 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2808 SN35N_2809 SN35N_2809 SN35N_2809 2927159 2927362 + hypothetical protein hypothetical protein zj316_2158 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2808 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2809 SN35N_2810 SN35N_2810 SN35N_2810 2927584 2928543 - transcription regulator diacylglycerol kinase catalytic domain%3B pfam00781%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [lipid metabolism / general function prediction only]%3B COG1597%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2809 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2810 SN35N_2811 SN35N_2811 SN35N_2811 2928606 2930282 - mRNA degradation ribonuclease J1/J2 RNA-metabolising metallo-beta-lactamase%3B pfam07521%3B~identified by MetaGeneAnnotator%3B putative%3B~mRNA degradation ribonuclease J1/J2 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [translation%2C ribosomal structure and biogenesis%3B replication%2C recombination and repair]%3B~metallo-beta-lactamase superfamily%3B cl00446%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2810 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2811 SN35N_2812 SN35N_2812 SN35N_2812 2930279 2930497 - UPF0356 protein UPF0356 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1447)%3B pfam07288 gene gene2811 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2812 SN35N_2813 SN35N_2813 SN35N_2813 2930780 2931286 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2812 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2813 SN35N_2814 SN35N_2814 SN35N_2814 2931316 2931876 - peptide deformylase catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Enterococcus casseliflavus EC20%3B~peptide deformylase [Enterococcus casseliflavus EC2 0] gene gene2813 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2814 SN35N_2815 SN35N_2815 pdhA pdhA 2932161 2933273 + pyruvate dehydrogenase complex%2C E1 component%2C alpha subunit TPP-binding site [chemical binding]%3B~heterodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphorylation loop region [posttranslational modification]%3B~pyruvate dehydrogenase E1 component%2C alpha subunit%3B TIGR03181%3B~pyruvate dehydrogenase complex%2C E1 component%2Calpha subunit [Lactobacillus plantarum ZJ316]%3B~tetramer interface [polypeptide binding] gene gene2814 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2815 SN35N_2816 SN35N_2816 SN35N_2816 2933275 2934252 + 2-oxoisovalerate dehydrogenase subunit beta 2-oxoisovalerate dehydrogenase subunit beta [Listeria monocytogenes]%3B~TPP binding site [chemical binding]%3B~alpha subunit interface [polypeptide binding]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~heterodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins%3B cd07036%3B~pyruvate/2-oxoglutarate dehydrogenase complex%2C dehydrogenase (E1) component%2C eukaryotic type%2C beta subunit [energy production and conversion]%3B COG0022%3B~transketolase%2C C-terminal domain%3B pfam02780 gene gene2815 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2816 SN35N_2817 SN35N_2817 pdhC pdhC 2934310 2935626 + pyruvate dehydrogenase complex%2C E2 component%3B dihydrolipoamide S-acetyltransferase 2-oxoacid dehydrogenases acyltransferase (catalytic domain)%3B pfam00198%3B~E3 interaction surface%3B~branched-chain alpha-keto acid dehydrogenase subunit E2%3B reviewed%3B~e3 binding domain%3B pfam02817%3B~identified by MetaGeneAnnotator%3B putative%3B~lipoyl attachment site [posttranslational modification]%3B~organism:Lactobacillus plantarum ZJ316%3B~pyruvate dehydrogenase complex%2C E2 component%3B dihyd rolipoamide S-acetyltransferase [Lactobacillus plantarum ZJ316] gene gene2816 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2817 SN35N_2818 SN35N_2818 pdhD pdhD 2935634 2937046 + dihydrolipoyl dehydrogenase NAD(P)-binding rossmann-like domain%3B pfam13450%3B~dihydrolipoamide dehydrogenase%3B reviewed%3B~dihydrolipoyl dehydrogenase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene2817 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2818 SN35N_2819 SN35N_2819 SN35N_2819 2937449 2938381 + malate/L-lactate/L-2-hydroxyisocapronate dehydrogenase NAD-dependent%2C lactate dehydrogenase-like%2C 2-hydroxycarboxylate dehydrogenase family%3B cl17195%3B~identified by MetaGeneAnnotator%3B putative%3B~malate/L-lactate/L-2-hydroxyisocapronate dehydrogenase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding] gene gene2818 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2819 SN35N_2820 SN35N_2820 SN35N_2820 2938374 2938661 + UPF0223 protein UPF0223 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein family (UPF0223)%3B pfam05256 gene gene2819 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2820 SN35N_2821 SN35N_2821 suhB suhB 2938672 2939445 + myo-inositol-1(Or 4)-monophosphatase archaeal fructose-1%2C6-bisphosphatase and related enzymes of inositol monophosphatase family [carbohydrate transport and metabolism]%3B COG0483%3B~identified by MetaGeneAnnotator%3B putative%3B~myo-inositol-1(Or 4)-monophosphatase [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2820 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2821 SN35N_2822 SN35N_2822 SN35N_2822 2939635 2941473 + GTP-binding protein TypA GTP-binding protein TypA [Lactobacillus rhamnosus GG]%3B~GTP/Mg2+ binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~predicted membrane GTPase involved in stress response [signal transduction mechanisms]%3B COG1217%3B~putative GEF interaction site [polypeptide binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~tyrosine phosphorylated protein A (TypA)/BipA family belongs to ribosome-binding GTPases%3B cd01891 gene gene2821 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2822 SN35N_2823 SN35N_2823 SN35N_2823 2941740 2942621 + extracellular protein%2C cell-wall anchored extracellular protein%2C cell-wall anchored [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2822 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2823 SN35N_2824 SN35N_2824 ica2 ica2 2943260 2943871 + glycosyltransferase glycosyltransferase[Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~putative glycosyltransferase%2C exosortase G-associated%3B TIGR03111 gene gene2823 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2824 SN35N_2825 SN35N_2825 SN35N_2825 2943976 2945562 + integral membrane protein conserved hypothetical integral membrane protein%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum ST-III]%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2824 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2825 SN35N_2826 SN35N_2826 ftsW ftsW 2946025 2947191 + cell division protein FtsW bacterial cell division membrane protein [cell division and chromosome partitioning]%3B COG0772%3B~cell division protein FtsW [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2825 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2826 SN35N_2827 SN35N_2827 SN35N_2827 2947222 2950653 + pyruvate carboxylase ATP-grasp domain%3B cl03087%3B~biotin carboxylase C-terminal domain%3B cl08365%3B~biotinylation site [posttranslational modification]%3B~carbamoyl-phosphate synthase L chain%2C N-terminal domain%3B pfam00289%3B~carboxyltransferase (CT) interaction site%3B~catalytic residues [active]%3B~homodimer binding site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Enterococcus casseliflavus EC20%3B~pyruvate carboxylase [Enterococcus casseliflavus EC 20]%3B~pyruvate carboxylase and transcarboxylase 5S%2C carboxyltransferase domain%3B cd07937%3B~pyruvate carboxylase%3B reviewed gene gene2826 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2827 SN35N_2828 SN35N_2828 SN35N_2828 2950814 2951116 + UPF0298 protein UPF0298 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2129)%3B pfam09902 gene gene2827 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2828 SN35N_2829 SN35N_2829 SN35N_2829 2951132 2951695 + N6-adenine-specific methylase Conserved hypothetical protein 95%3B pfam03602%3B~N6-adenine-specific methylase [Lactobacillus plantarum 16]%3B~S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2828 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2829 SN35N_2830 SN35N_2830 coaD coaD 2951699 2952190 + phosphopantetheine adenylyltransferase (T/H)XGH motif%3B~catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~phosphopantetheine adenylyltransferase [Lactobacillus plantarum JDM1]%3B~phosphopantetheine adenylyltransferase%3B cd02163%3B~phosphopantetheine adenylyltransferase%3B provisional%3B PRK00168 gene gene2829 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2830 SN35N_2831 SN35N_2831 lon lon 2952183 2953229 + endopeptidase La Lon protease (S16) C-terminal proteolytic domain%3B pfam05362%3B~endopeptidase La [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted secreted protein containing a PDZ domain [signal transduction mechanisms]%3B COG3480 gene gene2830 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2831 SN35N_2832 SN35N_2832 comEA comEA 2953332 2954057 + ComE operon protein 1 ComE operon protein 1 [Lactobacillus plantarum subsp. plantarum ST-III]%3B~SLBB domain%3B pfam10531%3B~comEA protein%3B TIGR01259%3B~helix-hairpin-helix motif%3B pfam00633%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2831 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2832 SN35N_2833 SN35N_2833 SN35N_2833 2954112 2954597 + deoxycytidylate deaminase Zn binding site [ion binding]%3B~catalytic motif [active]%3B~deoxycytidylate deaminase [Listeria monocytogenes]%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2832 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2833 SN35N_2834 SN35N_2834 comEC comEC 2954838 2956889 + competence protein ComE competence protein ComE [Lactobacillus plantarum JDM1]%3B~competence protein%3B pfam03772%3B~domain of unknown function (DUF4131)%3B pfam13567%3B~identified by MetaGeneAnnotator%3B putative%3B~metallo-beta-lactamase superfamily%3B pfam00753%3B~organism:Lactobacillus plantarum JDM1%3B~predicted hydrolase (metallo-beta-lactamase superfamily) [general function prediction only]%3B COG2333%3B~predicted membrane metal-binding protein [general function prediction only]%3B COG0658 gene gene2833 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2834 SN35N_2835 SN35N_2835 holA holA 2956840 2957901 + DNA-directed DNA polymerase III delta chain DNA polymerase III subunit delta%3B reviewed%3B PRK05574%3B~DNA polymerase III%2C delta subunit%3B pfam06144%3B~DNA-directed DNA polymerase III%2C delta chain [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2834 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2835 SN35N_2836 SN35N_2836 SN35N_2836 2958078 2958332 - 30S ribosomal protein S20 30S ribosomal protein S20 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S20%3B reviewed%3B PRK00239%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2835 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2836 SN35N_2837 SN35N_2837 rpsO rpsO 2958560 2958829 + 30S ribosomal protein S15 16S/18S rRNA binding site [nucleotide binding]%3B~25S rRNA binding site [nucleotide binding]%3B~30S ribosomal protein S15 [Streptococcus agalactiae NEM316]%3B~S13e-L30e interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus agalactiae NEM316 gene gene2836 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2837 SN35N_2838 SN35N_2838 SN35N_2838 2958966 2959835 + multidrug transport protein drug efflux system protein MdtG%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug transport protein [Lactobacillus plantarum JDM1]%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore gene gene2837 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2838 SN35N_2839 SN35N_2839 SN35N_2839 2959816 2960148 + transport protein%2C major facilitator superfamily drug efflux system protein MdtG%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative substrate translocation pore%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum WCFS1] gene gene2838 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2839 SN35N_2840 SN35N_2840 dapA1 dapA1 2960266 2961138 + dihydrodipicolinate synthase catalytic residue [active]%3B~dihydrodipicolinate synthase (DHDPS)%3B cd00950%3B~dihydrodipicolinate synthase [Lactobacillus plantarum ZJ316]%3B~dihydrodipicolinate synthase/N-acetylneuraminate lyase [amino acid transport and metabolism / cell envelope biogenesis%2C outer membrane]%3B COG0329%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2839 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2840 SN35N_2841 SN35N_2841 SN35N_2841 2961158 2962882 + metallo-beta-lactamase superfamily protein RNA-metabolising metallo-beta-lactamase%3B pfam07521%3B~identified by MetaGeneAnnotator%3B putative%3B~mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [translation%2C ribosomal structure and biogenesis%3B replication%2C recombination and repair]%3B~metallo-beta-lactamase superfamily protein [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~metallo-beta-lactamase superfamily%3B cl00446%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2840 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2841 SN35N_2842 SN35N_2842 SN35N_2842 2962945 2963859 + TPR repeat-containing protein TPR repeat-containing protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2841 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2842 SN35N_2843 SN35N_2843 SN35N_2843 2964074 2965261 + elongation factor Tu GEF interaction site [polypeptide binding]%3B~GTP/Mg2+ binding site [chemical binding]%3B~antibiotic binding site [chemical binding]%3B~elongation Factor Tu (EF-Tu) GTP-binding proteins%3B cd01884%3B~elongation factor Tu [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~elongation factor Tu%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2842 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2843 SN35N_2844 SN35N_2844 SN35N_2844 2965465 2966787 + trigger factor FKBP-type peptidyl-prolyl cis-trans isomerase%3B pfam00254%3B~bacterial trigger factor protein (TF) C-terminus%3B pfam05698%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~trigger factor [Lactobacillus rhamnosus GG]%3B~trigger factor%3B provisional%3B PRK01490 gene gene2843 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2844 SN35N_2845 SN35N_2845 clpX clpX 2967082 2968347 + ATP-dependent Clp protease ATP-binding subunit ClpX ATP binding site [chemical binding]%3B~ATP-dependent Clp protease ATP-binding subunit ClpX [Lactobacillus plantarum ZJ316]%3B~ATP-dependent protease ATP-binding subunit ClpX%3B provisional%3B PRK05342%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B smart01086%3B~ClpX C4-type zinc finger%3B pfam06689%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A motif%3B~walker B motif gene gene2844 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2845 SN35N_2846 SN35N_2846 SN35N_2846 2968506 2969099 + GTP-binding protein YsxC GTP-binding protein YsxC [Listeria monocytogenes]%3B~GTP/Mg2+ binding site [chemical binding]%3B~YihA (EngB) GTPase family%3B cd01876%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2845 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2846 SN35N_2847 SN35N_2847 SN35N_2847 2969101 2969397 + NTP pyrophosphohydrolase NTP pyrophosphohydrolase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoside triphosphate pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in a group of uncharacterized proteins from bacteria and archaea%3B cd11541%3B~organism:Lactobacillus plantarum ZJ316%3B~putative metal binding site [ion binding] gene gene2846 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2847 SN35N_2848 SN35N_2848 SN35N_2848 2969644 2970051 + hypothetical protein hypothetical protein zj316_2116 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2847 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2848 SN35N_2849 SN35N_2849 SN35N_2849 2970107 2970277 - hypothetical protein hypothetical protein zj316_2115 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2848 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2849 SN35N_2850 SN35N_2850 glnPH2 glnPH2 2970483 2971958 + glutamine ABC transporter%2C substrate binding and permease protein ABC-ATPase subunit interface%3B~ABC-type arginine transport system%2C permease component [amino acid transport and metabolism]%3B COG4215%3B~bacterial extracellular solute-binding proteins%2C family 3%3B pfam00497%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~glutamine ABC transporter%2C substrate binding and pe rmease protein [Lactobacillus plantarum ZJ316]%3B~hinge residues%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane-bound complex binding site%3B~organism:Lactobacillus plantarum ZJ316%3B~putative PBP binding loops%3B~substrate binding pocket [chemical binding] gene gene2849 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2850 SN35N_2851 SN35N_2851 SN35N_2851 2971951 2972691 + ABC-type polar amino acid transport system%2C ATPase component ABC transporter signature motif%3B~ABC-type polar amino acid transport system%2C ATPase component [Lactobacillus gasseri ATCC 33323]%3B~ABC-type polar amino acid transport system%2C ATPase component [amino acid transport and metabolism]%3B COG1126%3B~ATP binding site [chemical binding]%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~walker A/P-loop%3B~walker B gene gene2850 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2851 SN35N_2852 SN35N_2852 SN35N_2852 2972937 2974688 + excinuclease ABC subunit C UvrB/uvrC motif%3B pfam02151%3B~UvrC helix-hairpin-helix N-terminal%3B pfam08459%3B~catalytic GIY-YIG domain of nucleotide excision repair endonucleases UvrC%2C Cho%2C and similar proteins%3B cd10434%3B~catalytic site [active]%3B~excinuclease ABC subunit C [Lactobacillus rhamnosus GG]%3B~excinuclease ABC subunit C%3B validated%3B PRK00558%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus rhamnosus GG%3B~putative DNA binding site [nucleotide binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2851 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2852 SN35N_2853 SN35N_2853 cps4A cps4A 2975111 2975869 + polysaccharide biosynthesis protein%2C chain length regulator capsular polysaccharide biosynthesis protein [cell envelope biogenesis%2C outer membrane]%3B~chain length determinant protein%3B cl15801%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~polysaccharide biosynthesis protein%2C chain length regulator [Lactobacillus plantarum WCFS1] gene gene2852 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2853 SN35N_2854 SN35N_2854 cps2B cps2B 2975887 2976594 + polysaccharide biosynthesis protein%2C regulator capsular exopolysaccharide family%3B TIGR01007%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide biosynthesis protein%2Cregulator [Lactobacillus plantarum ZJ316] gene gene2853 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2854 SN35N_2855 SN35N_2855 cps4C cps4C 2976533 2977354 + polysaccharide biosynthesis protein%3B phosphatase capsular polysaccharide biosynthesis protein [carbohydrate transport and metabolism / cell envelope biogenesis%2C outer membrane]%3B COG4464%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polymerase and histidinol phosphatase domain%3B cl17102%3B~polysaccharide biosynthesis protein%3B phosphatase [Lactobacillus plantarum ZJ316] gene gene2854 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2855 SN35N_2856 SN35N_2856 cps4D cps4D 2977370 2978311 + UDP N-acetyl glucosamine 4-epimerase%2C NAD dependent NAD dependent epimerase/dehydratase family%3B pfam01370%3B~NAD(P) binding site [chemical binding]%3B~UDP N-acetyl glucosamine 4-epimerase%2C NAD dependent [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene2855 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2856 SN35N_2857 SN35N_2857 cps4E cps4E 2978298 2978963 + priming glycosyltransferase bacterial sugar transferase%3B pfam02397%3B~exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase%3B TIGR03025%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~priming glycosyltransferase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2856 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2857 SN35N_2858 SN35N_2858 cps4F cps4F 2978963 2980054 + glycosyltransferase glycosyltransferase [Lactobacillus plantarum JDM1]%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative ADP-binding pocket [chemical binding]%3B~this family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides%3B cd03808 gene gene2857 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2858 SN35N_2859 SN35N_2859 cps4G cps4G 2980070 2981098 + glycosyltransferase glycosyltransferase [Lactobacillus plantarum JDM1]%3B~glycosyltransferase [cell envelope biogenesis%2C outer membrane]%3B COG0438%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2858 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2859 SN35N_2860 SN35N_2860 cps4H cps4H 2981095 2982369 + polysaccharide polymerase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide polymerase [Lactobacillus plantarum ZJ316] gene gene2859 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2860 SN35N_2861 SN35N_2861 cps4I cps4I 2982354 2983322 + glycosyltransferase glycosyltransferase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold%3B cl11394%3B~glycosyltransferase like family 2%3B pfam10111%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2860 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2861 SN35N_2862 SN35N_2862 cps4J cps4J 2983879 2984853 + polysaccharide repeat unit transporter identified by MetaGeneAnnotator%3B putative%3B~membrane protein involved in the export of O-antigen and teichoic acid [general function prediction only]%3B COG2244%3B~multidrug and toxic compound extrusion family and similar proteins%3B cl09326%3B~organism:Lactobacillus plantarum ZJ316%3B~polysaccharide repeat unit transporter [Lactobacillus plantarum ZJ316] gene gene2861 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2862 SN35N_2863 SN35N_2863 SN35N_2863 2984961 2986199 - metallophosphoesterase%2C lipoprotein identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metallophosphatase superfamily%2C metallophosphatase domain%3B cl13995%3B~metallophosphoesterase%2C lipoprotein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted phosphohydrolases [general function prediction only]%3B COG1409 gene gene2862 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2863 SN35N_2864 SN35N_2864 SN35N_2864 2986423 2988351 - fusion of IIA%2C IIB and IIC component of mannitol/fructose-specific phosphotransferase system mannitol/fructose-specific P-loop%3B~PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC%3B provisional%3B~fusion of IIA%2C IIB and IIC component of mannitol/fructose-specific phosphotransferase system mannitol/fructos e-specific [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~phosphorylation site [posttranslational modification]%3B~phosphotransferase system IIC components%2C glucose/maltose/N-acetylglucosamine-specific [carbohydrate transport and metabolism]%3B cl00557 gene gene2863 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2864 SN35N_2865 SN35N_2865 fruK fruK 2988412 2989329 - 1-phosphofructokinase 1-phosphofructokinase [Lactobacillus plantarum WCFS1]%3B~fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [carbohydrate transport and metabolism]%3B COG1105%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative ATP binding site [chemical binding]%3B~putative substrate binding site [chemical binding] gene gene2864 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2865 SN35N_2866 SN35N_2866 fruR fruR 2989326 2990081 - transcription regulator of fructose operon DeoR C terminal sensor domain%3B pfam00455%3B~DeoR-like helix-turn-helix domain%3B cl17531%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transcription regulator of fructose operon [Lactobacillus plantarum subsp. plantarum P-8]%3B~transcriptional regulators of sugar metabolism [transcription / carbohydrate transport and metabolism]%3B COG1349 gene gene2865 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2866 SN35N_2867 SN35N_2867 obgE obgE 2990329 2991624 + GTPase CgtA GTP/Mg2+ binding site [chemical binding]%3B~GTP1/OBG%3B pfam01018%3B~GTPase CgtA [Listeria monocytogenes]%3B~GTPase CgtA%3B reviewed%3B PRK12297%3B~Obg GTPase%3B cd01898%3B~domain of unknown function (DUF1967)%3B pfam09269%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene2866 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2867 SN35N_2868 SN35N_2868 SN35N_2868 2991771 2992055 - hypothetical protein hypothetical protein zj316_2096 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2867 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2868 SN35N_2869 SN35N_2869 SN35N_2869 2992488 2993423 + beta-lactamase superfamily hydrolase beta-lactamase superfamily hydrolase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~ribonuclease Z%3B TIGR02651 gene gene2868 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2869 SN35N_2870 SN35N_2870 SN35N_2870 2993433 2994224 + short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum ZJ316]%3B~short-chain dehydrogenases of various substrate specificities [general function prediction only]%3B COG0300 gene gene2869 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2870 SN35N_2871 SN35N_2871 SN35N_2871 2994237 2994587 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene2870 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2871 SN35N_2872 SN35N_2872 recJ recJ 2994609 2996942 + single-strand DNA-specific exonuclease RecJ DHH family%3B pfam01368%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~single-strand DNA-specific exonuclease RecJ [Lactobacillus plantarum subsp. plantarum P-8]%3B~single-strand DNA-specific exonuclease%2C C terminal domain%3B pfam10141%3B~single-stranded-DNA-specific exonuclease RecJ%3B TIGR00644 gene gene2871 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2872 SN35N_2873 SN35N_2873 SN35N_2873 2996961 2997479 + adenine phosphoribosyltransferase adenine phosphoribosyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phosphoribosyl transferase (PRT)-type I domain%3B cd06223 gene gene2872 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2873 SN35N_2874 SN35N_2874 SN35N_2874 2997622 2998206 - transcriptional regulator dimerization interface [polypeptide binding]%3B~helix-turn-helix domain%3B pfam12840%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~transcriptional regulator [Lactobacillus plantarum WCFS1] gene gene2873 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2874 SN35N_2875 SN35N_2875 SN35N_2875 2998322 2999533 + transport protein%2C major facilitator superfamily H+ antiporter protein%3B TIGR00900%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transport protein%2C major facilitator superfamily [Lactobacillus plantarum WCFS1] gene gene2874 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2875 SN35N_2876 SN35N_2876 SN35N_2876 2999630 2999977 - UPF0145 protein UPF0145 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2875 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2876 SN35N_2877 SN35N_2877 SN35N_2877 3000089 3000850 + SAM-dependent methyltransferase SAM-dependent methyltransferase [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~methylase involved in ubiquinone/menaquinone biosynthesis [coenzyme metabolism]%3B COG2226%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene2876 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2877 SN35N_2878 SN35N_2878 SN35N_2878 3001025 3001231 + hypothetical protein hypothetical protein zj316_2085 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2877 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2878 SN35N_2879 SN35N_2879 SN35N_2879 3001764 3002927 - prophage Lp2 protein 2%2C integrase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~prophage Lp2 protein 2%2C integrase [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2878 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2879 SN35N_2880 SN35N_2880 SN35N_2880 3003144 3003782 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2879 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2880 SN35N_2881 SN35N_2881 SN35N_2881 3004494 3004682 - putative uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage Sha1 gene gene2880 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2881 SN35N_2882 SN35N_2882 SN35N_2882 3005030 3006271 - DNA polymerase III identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8 700:2 gene gene2881 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2882 SN35N_2883 SN35N_2883 SN35N_2883 3006332 3006745 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene2882 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2883 SN35N_2884 SN35N_2884 SN35N_2884 3006752 3007078 - transcription regulator helix-turn-helix XRE-family like proteins. prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators%3B cd00093%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~organism:Lactobacillus plantarum JDM1%3B~predicted transcriptional regulators [transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding]%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene2883 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2884 SN35N_2885 SN35N_2885 SN35N_2885 3007335 3007550 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene2884 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2885 SN35N_2886 SN35N_2886 SN35N_2886 3007564 3008370 + phage anti-repressor protein ORF6N domain%3B pfam10543%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~phage anti-repressor protein [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene2885 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2886 SN35N_2887 SN35N_2887 SN35N_2887 3008382 3008591 + hypothetical protein hypothetical protein zj316_2076 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2886 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2887 SN35N_2888 SN35N_2888 SN35N_2888 3008604 3008735 + hypothetical protein hypothetical protein zj316_2075 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2887 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2888 SN35N_2889 SN35N_2889 SN35N_2889 3008707 3009033 - RNA polymerase III RNA polymerase III [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2888 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2889 SN35N_2890 SN35N_2890 SN35N_2890 3009091 3009351 + XRE family transcriptional regulator XRE family transcriptional regulator [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2889 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2890 SN35N_2891 SN35N_2891 SN35N_2891 3009494 3009748 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene2890 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2891 SN35N_2892 SN35N_2892 SN35N_2892 3009751 3009951 + hypothetical protein hypothetical protein zj316_2071 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2891 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2892 SN35N_2893 SN35N_2893 SN35N_2893 3009929 3010186 + putative uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage Sha1 gene gene2892 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2893 SN35N_2894 SN35N_2894 SN35N_2894 3010235 3010405 + hypothetical protein hypothetical protein LPST_C1694 [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2893 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2894 SN35N_2895 SN35N_2895 SN35N_2895 3010405 3010662 + transcriptional regulator%2C ArsR family identified by MetaGeneAnnotator%3B putative%3B~organism:Methanosarcina mazei Tuc01 gene gene2894 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2895 SN35N_2896 SN35N_2896 SN35N_2896 3010765 3011508 + phage replication initiation protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage replication initiation protein [Lactobacillus plantarum ZJ316] gene gene2895 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2896 SN35N_2897 SN35N_2897 SN35N_2897 3011508 3012293 + DNA replication protein ATP binding site [chemical binding]%3B~DNA replication protein [DNA replication%2C recombination%2C and repair]%3B COG1484%3B~DNA replication protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A motif gene gene2896 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2897 SN35N_2898 SN35N_2898 SN35N_2898 3012290 3012451 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene2897 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2898 SN35N_2899 SN35N_2899 SN35N_2899 3012429 3012731 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene2898 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2899 SN35N_2900 SN35N_2900 SN35N_2900 3012734 3013045 + hypothetical protein hypothetical protein zj316_2067 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2899 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2900 SN35N_2901 SN35N_2901 SN35N_2901 3013156 3013761 + hypothetical protein HeH/LEM domain%3B pfam12949%3B~hypothetical protein zj316_2066 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2900 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2901 SN35N_2902 SN35N_2902 SN35N_2902 3013826 3013999 + endoplasmic reticulum-based factor for assembly of V-ATPase identified by MetaGeneAnnotator%3B putative%3B~organism:Toxoplasma gondii gene gene2901 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2902 SN35N_2903 SN35N_2903 SN35N_2903 3014080 3014508 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus buchneri (strain NRRL B-3092 9) gene gene2902 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2903 SN35N_2904 SN35N_2904 SN35N_2904 3014505 3014789 + prophage P1 protein 27 identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~prophage P1 protein 27 [Lactobacillus plantarum WCFS1] gene gene2903 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2904 SN35N_2905 SN35N_2905 SN35N_2905 3015224 3015649 + RinA family phage transcriptional regulator RinA family phage transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phage transcriptional activator%2C RinA family%3B TIGR01636 gene gene2904 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2905 SN35N_2906 SN35N_2906 SN35N_2906 3016701 3017624 + hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2905 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2906 SN35N_2907 SN35N_2907 SN35N_2907 3017707 3017886 + putative prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative prophage protein [Lactobacillus plantarum ZJ316] gene gene2906 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2907 SN35N_2908 SN35N_2908 SN35N_2908 3017855 3018367 + restriction endonuclease identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~restriction endonuclease [Lactobacillus plantarum subsp. plantarum P-8]%3B~restriction endonuclease [defense mechanisms]%3B COG1403 gene gene2907 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2908 SN35N_2909 SN35N_2909 SN35N_2909 3018587 3019048 + phage terminase%2C small subunit%2C P27 family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus reuteri I5007 gene gene2908 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2909 SN35N_2910 SN35N_2910 SN35N_2910 3019035 3020942 + phage terminase%2C small subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Oenococcus oeni AWRIB304 gene gene2909 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2910 SN35N_2911 SN35N_2911 SN35N_2911 3020932 3021126 + prophage protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage protein [Lactobacillus plantarum ZJ316]%3B~protein of unknown function (DUF1056)%3B pfam06341 gene gene2910 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2911 SN35N_2912 SN35N_2912 SN35N_2912 3021129 3021410 + prophage protein%2C portal protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage portal protein%3B pfam04860%3B~phage-related protein [function unknown]%3B~prophage protein%2C portal protein [Lactobacillus plantarum ZJ316] gene gene2911 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2912 SN35N_2913 SN35N_2913 SN35N_2913 3021457 3022278 + prophage protein%2C portal protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage portal protein%3B pfam04860%3B~phage-related protein [function unknown]%3B~prophage protein%2C portal protein [Lactobacillus plantarum ZJ316] gene gene2912 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2913 SN35N_2914 SN35N_2914 SN35N_2914 3022256 3023014 + protease subunit of ATP-dependent Clp protease active site residues [active]%3B~caseinolytic protease (ClpP) is an ATP-dependent%2C highly conserved serine protease%3B cd07016%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomer interface [polypeptide binding]%3B~organism:Pediococcus pentosaceus ATCC 25745%3B~protease subunit of ATP-dependent Clp protease [Pediococcus pentosaceus ATCC 25745] gene gene2913 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2914 SN35N_2915 SN35N_2915 SN35N_2915 3023014 3024246 + prophage protein%2C major head protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage capsid family%3B pfam05065%3B~phage major capsid protein%2C HK97 family%3B TIGR01554%3B~prophage protein%2C major head protein [Lactobacillus plantarum ZJ316] gene gene2914 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2915 SN35N_2916 SN35N_2916 SN35N_2916 3024319 3024657 + phage protein DNA packaging protein head-tail connector protein gp6 of bacteriophage HK97 and similar proteins%3B cd08054%3B~identified by MetaGeneAnnotator%3B putative%3B~oligomerization interface [polypeptide binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~phage protein DNA packaging protein [Lactobacillus plantarum ZJ316] gene gene2915 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2916 SN35N_2917 SN35N_2917 SN35N_2917 3024641 3025003 + phage head-tail adaptor identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage head-tail adaptor [Lactobacillus plantarum ZJ316]%3B~phage head-tail joining protein%3B pfam05521 gene gene2916 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2917 SN35N_2918 SN35N_2918 SN35N_2918 3024993 3025433 + phage head-tail joining protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage head-tail joining protein [Lactobacillus plantarum ZJ316] gene gene2917 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2918 SN35N_2919 SN35N_2919 SN35N_2919 3025430 3025813 + hypothetical protein hypothetical protein zj316_2049 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF806)%3B pfam05657 gene gene2918 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2919 SN35N_2920 SN35N_2920 SN35N_2920 3025814 3026452 + major tail protein identified by MetaGeneAnnotator%3B putative%3B~major tail protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~phage major tail protein%3B pfam04630 gene gene2919 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2920 SN35N_2921 SN35N_2921 SN35N_2921 3026654 3027037 + hypothetical protein hypothetical protein zj316_2047 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2920 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2921 SN35N_2922 SN35N_2922 SN35N_2922 3027034 3027225 + hypothetical protein hypothetical protein zj316_2046 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2921 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2922 SN35N_2923 SN35N_2923 SN35N_2923 3027238 3028278 + putative minor tail protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phage-related tail protein [function unknown]%3B~putative minor tail protein [Lactobacillus plantarum ZJ316] gene gene2922 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2923 SN35N_2924 SN35N_2924 SN35N_2924 3028366 3029295 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene2923 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2924 SN35N_2925 SN35N_2925 SN35N_2925 3029413 3033219 + putative minor tail protein MAEBL%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative minor tail protein [Lactobacillus plantarum ZJ316] gene gene2924 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2925 SN35N_2926 SN35N_2926 SN35N_2926 3033292 3034164 + minor structural protein gp75-like protein identified by MetaGeneAnnotator%3B putative%3B~minor structural protein gp75-like protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~phage tail protein%3B cl17486 gene gene2925 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2926 SN35N_2927 SN35N_2927 SN35N_2927 3034226 3035065 + minor structural protein gp75-like protein identified by MetaGeneAnnotator%3B putative%3B~minor structural protein gp75-like protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2926 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2927 SN35N_2928 SN35N_2928 SN35N_2928 3035129 3037480 + hypothetical protein hypothetical protein zj316_2043 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage endopeptidase tail%3B cl12123 gene gene2927 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2928 SN35N_2929 SN35N_2929 SN35N_2929 3037497 3040262 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum AY01 gene gene2928 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2929 SN35N_2930 SN35N_2930 SN35N_2930 3040255 3040509 + hypothetical protein hypothetical protein zj316_2041 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2929 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2930 SN35N_2931 SN35N_2931 SN35N_2931 3040513 3040674 + hypothetical protein hypothetical protein zj316_2040 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2930 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2931 SN35N_2932 SN35N_2932 SN35N_2932 3040658 3041419 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum EGD-AQ4 gene gene2931 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2932 SN35N_2933 SN35N_2933 SN35N_2933 3041436 3042608 + prophage Lp1 protein 58%2C lysin FOG: LysM repeat [cell envelope biogenesis%2C outer membrane]%3B COG1388%3B~bacterial SH3 domain%3B pfam08460%3B~glycosyl hydrolases family 25%3B pfam01183%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum ZJ316%3B~prophage Lp1 protein 58%2C lysin [Lactobacillus plantarum ZJ316] gene gene2932 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2933 SN35N_2934 SN35N_2934 SN35N_2934 3042608 3042871 + hypothetical protein haemolysin XhlA%3B pfam10779%3B~hypothetical protein zj316_2036 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2933 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2934 SN35N_2935 SN35N_2935 SN35N_2935 3042884 3043414 + putative uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus phage Sha1 gene gene2934 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2935 SN35N_2936 SN35N_2936 SN35N_2936 3043983 3044981 - integrase catalytic subunit helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase catalytic subunit [Lactobacillus casei LC2W]%3B~integrase core domain%3B pfam00665%3B~organism:Lactobacillus casei LC2W%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene2935 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2936 SN35N_2937 SN35N_2937 rodA1 rodA1 3045777 3046988 + rod-shape determining protein bacterial cell division membrane protein [cell division and chromosome partitioning]%3B COG0772%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~rod-shape determining protein [Lactobacillus plantarum subsp. plantarum ST-III] gene gene2936 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2937 SN35N_2938 SN35N_2938 SN35N_2938 3047467 3048945 + nitrate/sulfonate/bicarbonate ABC transporter%2C permease protein ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitrate/sulfonate/bicarbonate ABC transporter%2Cpermease protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2937 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2938 SN35N_2939 SN35N_2939 SN35N_2939 3048834 3049208 + nitrate ABC transporter%2C permease protein ABC-type anion transport system%2C duplicated permease component [inorganic ion transport and metabolism]%3B~identified by MetaGeneAnnotator%3B putative%3B~nitrate ABC transporter%2C permease protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2938 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2939 SN35N_2940 SN35N_2940 SN35N_2940 3049227 3050018 + nitrate/sulfonate/bicarbonate ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC-type antimicrobial peptide transport system%2C ATPase component [defense mechanisms]%3B COG1136%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the nitrate and sulfonate transporters%3B cd03293%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~nitrate/sulfonate/bicarbonate ABC transporter%2CATP-binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene2939 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2940 SN35N_2941 SN35N_2941 SN35N_2941 3050023 3051183 + transcriptional attenuator%2C cell envelope-related%2C LytR family identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional attenuator%2C cell envelope-related%2C LytR family [Lactobacillus plantarum WCFS1]%3B~transcriptional regulator [transcription]%3B COG1316 gene gene2940 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2941 SN35N_2942 SN35N_2942 SN35N_2942 3051335 3051907 + transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2941 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2942 SN35N_2943 SN35N_2943 SN35N_2943 3052659 3053600 - glycosyltransferase DXD motif%3B~bacterial DPM1_like enzymes are related to eukaryotic DPM1%3B cd04187%3B~glycosyltransferase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site%3B~organism:Lactobacillus plantarum JDM1%3B~putative catalytic site gene gene2942 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2943 SN35N_2944 SN35N_2944 SN35N_2944 3054046 3054438 - hypothetical protein PTS system%2C beta-glucoside-specific IIABC component%3B TIGR01995%3B~hypothetical protein zj316_2026 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2943 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2944 SN35N_2945 SN35N_2945 SN35N_2945 3054602 3054994 + hypothetical protein hypothetical protein zj316_2025 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2944 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2945 SN35N_2946 SN35N_2946 mvaS mvaS 3055030 3056199 + hydroxymethylglutaryl-CoA synthase 3-hydroxy-3-methylglutaryl CoA synthase%2C prokaryotic clade%3B TIGR01835%3B~dimer interface [polypeptide binding]%3B~hydroxymethylglutaryl-CoA synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2945 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2946 SN35N_2947 SN35N_2947 SN35N_2947 3056249 3056878 - hypothetical protein hypothetical protein zj316_2023 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2946 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2947 SN35N_2948 SN35N_2948 SN35N_2948 3057502 3058134 - LexA repressor COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases)%3B~LexA repressor [Lactobacillus amylovorus GRL 1112]%3B~LexA repressor%3B validated%3B~catalytic site [active]%3B~helix-turn-helix domains%3B cl00088%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene2947 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2948 SN35N_2949 SN35N_2949 SN35N_2949 3058144 3058317 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene2948 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2949 SN35N_2950 SN35N_2950 SN35N_2950 3058286 3058525 + UPF0291 protein UPF0291 protein [Lactobacillus plantarum ZJ316]%3B~bacterial protein of unknown function (DUF896)%3B pfam05979%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2949 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2950 SN35N_2951 SN35N_2951 SN35N_2951 3058629 3058859 + UPF0154 protein UPF0154 protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene2950 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2951 SN35N_2952 SN35N_2952 plsC plsC 3058916 3059551 - 1-acylglycerol-3-phosphate O-acyltransferase 1-acyl-sn-glycerol-3-phosphate acyltransferase [lipid metabolism]%3B COG0204%3B~1-acylglycerol-3-phosphate O-acyltransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysophospholipid acyltransferases (LPLATs) of glycerophospholipid Biosynthesis: AGPAT-like%3B cd07989%3B~organism:Lactobacillus plantarum ZJ316%3B~putative acyl-acceptor binding pocket gene gene2951 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2952 SN35N_2953 SN35N_2953 SN35N_2953 3059663 3060421 + methyltransferase S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~methyltransferase [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted O-methyltransferase [general function prediction only] gene gene2952 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2953 SN35N_2954 SN35N_2954 SN35N_2954 3060405 3060710 + endonuclease%2C GIY-YIG nuclease superfamily GIY-YIG motif/motif A%3B~endonuclease%2C GIY-YIG nuclease superfamily [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~putative active site [active]%3B~putative metal binding site [ion binding]%3B~the GIY-YIG domain of uncharacterized protein family UPF0213 related to structure-specific endonuclease SLX1%3B cd10456 gene gene2953 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2954 SN35N_2955 SN35N_2955 ldhD ldhD 3060795 3061793 + D-lactate dehydrogenase D-lactate dehydrogenase [Lactobacillus plantarum ZJ316]%3B~D-lactate dehydrogenase and D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH)%2C NAD-binding and catalytic domains%3B cd12186%3B~D-lactate dehydrogenase%3B validated%3B~NAD binding site [chemical binding]%3B~catalytic site [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~ligand binding site [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene2954 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2955 SN35N_2956 SN35N_2956 isp2 isp2 3061780 3063297 - transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene2955 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2956 SN35N_2957 SN35N_2957 SN35N_2957 3063854 3064576 - hydrolase%2C HAD superfamily hydrolase%2C HAD superfamily [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted hydrolase (HAD superfamily) [general function prediction only] gene gene2956 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2957 SN35N_2958 SN35N_2958 SN35N_2958 3064801 3065604 + 30S ribosomal protein S2 30S ribosomal protein S2 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~S8 interaction site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative laminin-1 binding site%3B~rRNA interaction site [nucleotide binding] gene gene2957 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2958 SN35N_2959 SN35N_2959 SN35N_2959 3065707 3066585 + elongation factor Ts UBA/TS-N domain%3B pfam00627%3B~elongation factor TS%3B pfam00889%3B~elongation factor Ts [Lactobacillus rhamnosus GG]%3B~elongation factor Ts%3B provisional%3B PRK09377%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2958 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2959 SN35N_2960 SN35N_2960 SN35N_2960 3066786 3067508 + uridylate kinase homohexameric interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~putative nucleotide binding site [chemical binding]%3B~uridine monophosphate binding site [chemical binding]%3B~uridylate kinase [Enterococcus casseliflavus EC20] gene gene2959 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2960 SN35N_2961 SN35N_2961 SN35N_2961 3067510 3068073 + ribosome recycling factor derived by automated computational analysis using gene prediction method: protein homology.%3B~hinge region%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~ribosome recycling factor [Listeria monocytogenes]%3B~ribosome recycling factor%3B reviewed%3B PRK00083 gene gene2960 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2961 SN35N_2962 SN35N_2962 uppS uppS 3068193 3068972 + ditrans%2C polycis-undecaprenyl-diphosphate synthase catalytic residue [active]%3B~dimer interface [polypeptide binding]%3B~ditrans%2Cpolycis-undecaprenyl-diphosphate synthase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative FPP binding hydrophobic cleft%3B~putative FPP diphosphate binding site%3B~putative IPP diphosphate binding site%3B~undecaprenyl pyrophosphate synthase [lipid metabolism]%3B COG0020%3B~undecaprenyl pyrophosphate synthase%3B provisional gene gene2961 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2962 SN35N_2963 SN35N_2963 cdsA cdsA 3068988 3069773 + phosphatidate cytidylyltransferase CDP-diglyceride synthetase [lipid metabolism]%3B COG0575%3B~cytidylyltransferase family%3B pfam01148%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphatidate cytidylyltransferase [Lactobacillus plantarum ZJ316] gene gene2962 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2963 SN35N_2964 SN35N_2964 SN35N_2964 3069811 3071088 + zinc-dependent protease%2C membrane associated RIP metalloprotease RseP%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate binding region [chemical binding]%3B~zinc-dependent protease%2C membrane associated [Lactobacillus plantarum ZJ316] gene gene2963 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2964 SN35N_2965 SN35N_2965 SN35N_2965 3071128 3072837 + prolyl-tRNA synthetase anticodon binding site%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes%3B~prolyl-tRNA synthetase [Listeria monocytogenes]%3B~prolyl-tRNA synthetase%3B provisional%3B~putative deacylase active site [active] gene gene2964 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2965 SN35N_2966 SN35N_2966 polC polC 3073331 3077644 + DNA polymerase III PolC DEDDh 3'-5' exonuclease domain family%3B cd06127%3B~DNA polymerase III PolC [Lactobacillus plantarum JDM1]%3B~DNA polymerase III PolC%3B validated%3B PRK00448%3B~DNA polymerase III polC-type N-terminus%3B pfam11490%3B~catalytic site [active]%3B~catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B required for leading strand synthesis%3B PolC exhibits 3' to 5' exonuclease activity%3B~generic binding surface I%3B~generic binding surface II%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~polymerase and histidinol phosphatase domain of alpha-subunit of bacterial polymerase III at PolC gene%3B cd07435%3B~polymerase and histidinol phosphatase domain%3B cl17102%3B~substrate binding site [chemical binding] gene gene2965 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2966 SN35N_2967 SN35N_2967 rimP rimP 3077940 3078416 + ribosome maturation factor RimP Bacillus subtilis YxlS-like%2C C-terminal domain%3B cd01734%3B~Sm and related proteins%3B cl00259%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative RNA binding site [nucleotide binding]%3B~putative oligomer interface [polypeptide binding]%3B~ribosome maturation factor RimP [Lactobacillus plantarum ZJ316]%3B~ribosome maturation protein RimP%3B reviewed gene gene2966 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2967 SN35N_2968 SN35N_2968 SN35N_2968 3078437 3079654 + transcription termination factor NusA G-X-X-G motif%3B~NusA N-terminal domain%3B pfam08529%3B~RNA binding site [nucleotide binding]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~transcription elongation factor NusA%3B provisional%3B PRK12327%3B~transcription termination factor NusA [Enterococcus casseliflavus EC20] gene gene2967 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2968 SN35N_2969 SN35N_2969 SN35N_2969 3079699 3079998 + nucleic-acid-binding protein implicated in transcription termination identified by MetaGeneAnnotator%3B putative%3B~nucleic-acid-binding protein implicated in transcription termination [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative RNA binding cleft [nucleotide binding] gene gene2968 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2969 SN35N_2970 SN35N_2970 SN35N_2970 3079988 3080293 + ribosomal protein HS6-type identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosomal protein HS6-type [Lactobacillus plantarum ZJ316]%3B~ribosomal protein L7Ae/L30e/S12e/Gadd45 family%3B cl00600 gene gene2969 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2970 SN35N_2971 SN35N_2971 SN35N_2971 3080308 3082884 + translation initiation factor IF-2 GTP/Mg2+ binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~initiation Factor 2 (IF2)/ eukaryotic initiation Factor 5B (eIF5B) family%3B cd01887%3B~organism:Enterococcus casseliflavus EC20%3B~putative GEF interaction site [polypeptide binding]%3B~translation initiation factor IF-2 [Enterococcus casseliflavus EC20]%3B~translation initiation factor IF-2%2C N-terminal region%3B pfam04760%3B~translation initiation factor IF-2%3B TIGR00487%3B~translation-initiation factor 2%3B pfam11987 gene gene2970 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2971 SN35N_2972 SN35N_2972 SN35N_2972 3082907 3083260 + ribosome-binding factor A identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20%3B~ribosome-binding factor A [Enterococcus casseliflavus EC20]%3B~ribosome-binding factor A%3B cl00542 gene gene2971 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2972 SN35N_2973 SN35N_2973 SN35N_2973 3083909 3084844 + bifunctional protein: transport protein%2C MFS bifunctional protein: transport protein%2C MFS [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum 16%3B~putative substrate translocation pore gene gene2972 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2973 SN35N_2974 SN35N_2974 nnrD nnrD 3084844 3085362 + bifunctional protein: transport protein%2C MFS%3B chorismate mutase type II bifunctional protein: transport protein%2C MFS%3B chorismate mutase type II [Lactobacillus plantarum ZJ316]%3B~chorismate mutase type II%3B pfam01817%3B~identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum ZJ316%3B~putative substrate translocation pore gene gene2973 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2974 SN35N_2975 SN35N_2975 aroF aroF 3085355 3086524 + chorismate synthase FMN-binding site [chemical binding]%3B~chorismase synthase%2C the enzyme catalyzing the final step of the shikimate pathway%3B cd07304%3B~chorismate synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~chorismate synthase [amino acid transport and metabolism]%3B COG0082%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~tetramer interface [polypeptide binding] gene gene2974 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2975 SN35N_2976 SN35N_2976 SN35N_2976 3086533 3087060 + aromatic amino acid biosynthesis enzyme aromatic amino acid biosynthesis enzyme [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene2975 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2976 SN35N_2977 SN35N_2977 aroA aroA 3087074 3088372 + 3-phosphoshikimate 1-carboxyvinyltransferase 3-phosphoshikimate 1-carboxyvinyltransferase [Lactobacillus plantarum JDM1]%3B~3-phosphoshikimate 1-carboxyvinyltransferase%3B provisional%3B~catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis%3B~hinge%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2976 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2977 SN35N_2978 SN35N_2978 tyrA tyrA 3088375 3089472 + prephenate dehydrogenase C-terminal ACT domain of the monofunctional%2C NAD dependent%2C prephenate dehydrogenase (PDH)%3B cd04909%3B~catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~prephenate dehydrogenase [Lactobacillus plantarum JDM1]%3B~prephenate dehydrogenase%3B validated gene gene2977 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2978 SN35N_2979 SN35N_2979 aroI aroI 3089475 3089996 + shikimate kinase ADP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~magnesium binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative shikimate binding site%3B~shikimate kinase [Lactobacillus plantarum ZJ316]%3B~shikimate kinase%3B reviewed%3B PRK00131 gene gene2978 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2979 SN35N_2980 SN35N_2980 truB truB 3090481 3091404 + tRNA pseudouridine synthase B RNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pseudouridine synthase%2C Escherichia coli TruB like%3B cd02573%3B~tRNA pseudouridine synthase B [Lactobacillus plantarum subsp. plantarum P-8]%3B~tRNA pseudouridine synthase B%3B provisional%3B PRK01550 gene gene2979 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2980 SN35N_2981 SN35N_2981 ribC2 ribC2 3091417 3092418 + bifunctional protein: riboflavin kinase%3B FMN adenylyltransferase FAD synthetase%2C N-terminal domain of the bifunctional enzyme%3B cd02064%3B~bifunctional protein: riboflavin kinase%3B FMN adenylyltransferase [Lactobacillus plantarum ZJ316]%3B~bifunctional riboflavin kinase/FMN adenylyltransferase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~riboflavin kinase%3B smart00904 gene gene2980 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2981 SN35N_2982 SN35N_2982 SN35N_2982 3092419 3093129 + alpha-acetolactate decarboxylase alpha-acetolactate decarboxylase [Lactobacillus plantarum 16]%3B~alpha-acetolactate decarboxylase%3B pfam03306%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene2981 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2982 SN35N_2983 SN35N_2983 hrcA hrcA 3093520 3094563 + heat-inducible transcription repressor HrcA NLE (NUC135) domain%3B pfam08154%3B~heat-inducible transcription repressor HrcA [Lactobacillus plantarum ZJ316]%3B~heat-inducible transcription repressor%3B provisional%3B PRK00082%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~winged helix-turn-helix transcription repressor%2C HrcA DNA-binding%3B pfam03444 gene gene2982 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2983 SN35N_2984 SN35N_2984 SN35N_2984 3094584 3095183 + protein grpE GrpE%3B pfam01025%3B~dimer interface [polypeptide binding]%3B~hsp70 (ATPase domain) interactions [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein grpE [Lactobacillus plantarum subsp. plantarum P-8] gene gene2983 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2984 SN35N_2985 SN35N_2985 dnaK dnaK 3095227 3097095 + chaperone protein DnaK chaperone protein DnaK [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~molecular chaperone DnaK%3B provisional%3B PRK00290%3B~nucleotide binding site [chemical binding]%3B~nucleotide-binding domain of the sugar kinase/HSP70/actin superfamily%3B cl17037%3B~organism:Lactobacillus plantarum ZJ316 gene gene2984 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2985 SN35N_2986 SN35N_2986 SN35N_2986 3097197 3098339 + chaperone protein DnaJ C-terminal substrate binding domain of DnaJ and HSP40%3B cd10747%3B~C-terminal substrate binding domain of DnaJ and HSP40%3B cl03262%3B~HSP70 interaction site [polypeptide binding]%3B~Zn binding sites [ion binding]%3B~chaperone protein DnaJ [Lactobacillus rhamnosus GG]%3B~chaperone protein DnaJ%3B provisional%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~substrate binding site [polypeptide binding]%3B~zinc finger domain of DnaJ and HSP40%3B cd10719 gene gene2985 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2986 SN35N_2987 SN35N_2987 pbpX2 pbpX2 3098773 3099948 + serine-type D-Ala-D-Ala carboxypeptidase beta-lactamase class C and other penicillin binding proteins [defense mechanisms]%3B COG1680%3B~beta-lactamase%3B pfam00144%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum subsp. plantarum P-8] gene gene2986 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2987 SN35N_2988 SN35N_2988 dltX dltX 3099980 3100129 + D-Ala-teichoic acid biosynthesis protein D-Ala-teichoic acid biosynthesis protein [Lactobacillus plantarum ZJ316]%3B~D-Ala-teichoic acid biosynthesis protein%3B pfam12459%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2987 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2988 SN35N_2989 SN35N_2989 SN35N_2989 3100172 3101698 + D-alanine-poly(phosphoribitol) ligase subunit 1 AMP-binding enzyme%3B cl15778%3B~D-alanine--poly(phosphoribitol) ligase%2C subunit 1%3B TIGR01734%3B~D-alanine-poly(phosphoribitol) ligase subunit 1 [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~protein kinases%2C catalytic domain%3B cl09925 gene gene2988 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2989 SN35N_2990 SN35N_2990 SN35N_2990 3101695 3102909 + D-alanyl transfer protein D-alanyl transfer protein [Lactobacillus gasseri ATCC 33323]%3B~MBOAT%2C membrane-bound O-acyltransferase family%3B cl00738%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene2989 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2990 SN35N_2991 SN35N_2991 dltC1 dltC1 3102939 3103175 + D-alanine--poly(phosphoribitol) ligase subunit 2 D-alanine--poly(phosphoribitol) ligase subunit 2 [Lactobacillus plantarum JDM1]%3B~D-alanine--poly(phosphoribitol) ligase subunit 2%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene2990 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2991 SN35N_2992 SN35N_2992 dltD dltD 3103172 3104449 + poly(glycerophosphate chain) D-alanine transfer protein DltD D-alanyl-lipoteichoic acid biosynthesis protein DltD%3B TIGR04092%3B~DltD C-terminal region%3B pfam04914%3B~DltD N-terminal region%3B pfam04915%3B~DltD central region%3B pfam04918%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~poly(glycerophosphate chain) D-alanine transfer protein DltD [Lactobacillus plantarum ZJ316] gene gene2991 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2992 SN35N_2993 SN35N_2993 SN35N_2993 3104613 3106448 + GTP-binding protein LepA GTP-binding protein LepA C-terminus%3B pfam06421%3B~GTP-binding protein LepA [Lactobacillus rhamnosus GG]%3B~GTP-binding protein LepA%3B provisional%3B~GTP/Mg2+ binding site [chemical binding]%3B~LepA also known as elongation Factor 4 (EF4)%3B cd01890%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~putative GEF interaction site [polypeptide binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene2992 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2993 SN35N_2994 SN35N_2994 SN35N_2994 3106554 3106844 - hypothetical protein hypothetical protein zj316_1973 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2993 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2994 SN35N_2995 SN35N_2995 SN35N_2995 3107099 3107389 + hypothetical protein hypothetical protein zj316_1972 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene2994 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2995 SN35N_2996 SN35N_2996 SN35N_2996 3107456 3108085 + DNA-3-methyladenine glycosylase DNA binding site [nucleotide binding]%3B~DNA-3-methyladenine glycosylase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~alkyladenine DNA glycosylase catalyzes the first step in base excision repair%3B cd00540%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene2995 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2996 SN35N_2997 SN35N_2997 prmA prmA 3108194 3109144 + ribosomal protein L11 methyltransferase S-adenosylmethionine binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosomal protein L11 methylase [translation%2C ribosomal structure and biogenesis]%3B COG2264%3B~ribosomal protein L11 methyltransferase [Lactobacillus plantarum ZJ316] gene gene2996 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2997 SN35N_2998 SN35N_2998 rsmE rsmE 3109157 3109909 + ribosomal RNA small subunit methyltransferase E RNA methyltransferase%3B pfam04452%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~ribosomal RNA small subunit methyltransferase E [Lactobacillus plantarum ZJ316] gene gene2997 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2998 SN35N_2999 SN35N_2999 SN35N_2999 3109980 3110315 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene2998 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_2999 SN35N_3000 SN35N_3000 SN35N_3000 3110438 3112663 + GTP pyrophosphokinase ACT domain found C-terminal of the RelA/SpoT domains%3B cd04876%3B~GTP pyrophosphokinase [Lactobacillus rhamnosus GG]%3B~Mg2+ binding site [ion binding]%3B~NTP binding site [chemical binding]%3B~Zn2+ binding site [ion binding]%3B~guanosine polyphosphate pyrophosphohydrolases/synthetases [signal transduction mechanisms / transcription]%3B COG0317%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~nucleotidyltransferase (NT) domain of RelA- and SpoT-like ppGpp synthetases and hydrolases%3B cd05399%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~synthetase active site [active] gene gene2999 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3000 SN35N_3001 SN35N_3001 SN35N_3001 3112673 3113119 + D-tyrosyl-tRNA(Tyr) deacylase D-tyrosyl-tRNA(Tyr) deacylase [Lactobacillus paraca sei subsp. paracasei 8700:2]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~putative active site [active]%3B~putative tRNAtyr binding site [nucleotide binding] gene gene3000 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3001 SN35N_3002 SN35N_3002 SN35N_3002 3113192 3113815 + HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~predicted phosphatases [general function prediction only]%3B COG0546 gene gene3001 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3002 SN35N_3003 SN35N_3003 SN35N_3003 3113923 3114765 - fructosamine kinase family protein ATP binding site [chemical binding]%3B~fructosamine kinase family protein [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphotransferase enzyme family%3B pfam01636%3B~substrate binding site [chemical binding] gene gene3002 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3003 SN35N_3004 SN35N_3004 lytH lytH 3115034 3115882 - N-acetylmuramoyl-L-alanine amidase N-acetylmuramoyl-L-alanine amidase [Lactobacillus plantarum JDM1]%3B~N-acetylmuramoyl-L-alanine amidase [cell envelope biogenesis%2C outer membrane]%3B COG0860%3B~bacterial SH3 domain%3B pfam08239%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum JDM1 gene gene3003 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3004 SN35N_3005 SN35N_3005 SN35N_3005 3116273 3117553 + histidyl-tRNA synthetase anticodon binding site%3B~dimer interface [polypeptide binding]%3B~histidyl-tRNA synthetase [Enterococcus casseliflavu s EC20]%3B~histidyl-tRNA synthetase%3B reviewed%3B PRK00037%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene3004 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3005 SN35N_3006 SN35N_3006 SN35N_3006 3117595 3119391 + aspartyl-tRNA synthetase GAD domain%3B pfam02938%3B~anticodon binding site%3B~aspartyl-tRNA synthetase [Lactobacillus rhamnosus GG]%3B~aspartyl-tRNA synthetase%3B validated%3B PRK00476%3B~dimer interface [polypeptide binding]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3005 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3006 SN35N_3007 SN35N_3007 msrA msrA 3119472 3120002 + peptide methionine sulfoxide reductase MsrA identified by MetaGeneAnnotator%3B putative%3B~methionine sulfoxide reductase A%3B provisional%3B~organism:Lactobacillus plantarum ZJ316%3B~peptide methionine sulfoxide reductase MsrA [Lactobacillus plantarum ZJ316] gene gene3006 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3007 SN35N_3008 SN35N_3008 SN35N_3008 3120205 3121080 + integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~uncharacterized BCR%2C YitT family COG1284%3B pfam02588%3B~uncharacterized conserved protein [function unknown]%3B~uncharacterized protein conserved in bacteria (DUF2179)%3B pfam10035 gene gene3007 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3008 SN35N_3009 SN35N_3009 tagB3 tagB3 3121463 3122614 + teichoic acid biosynthesis protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [cell envelope biogenesis%2C outer membrane]%3B COG1887%3B~teichoic acid biosynthesis protein [Lactobacillus plantarum JDM1] gene gene3008 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3009 SN35N_3010 SN35N_3010 SN35N_3010 3122727 3123623 + endonuclease IV AP (apurinic/apyrimidinic) site pocket%3B~DNA interaction%3B~derived by automated computational analysis using gene prediction method: protein homology.%3B~endonuclease IV [Listeria monocytogenes]%3B~endonuclease IV%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~metal-binding active site%3B~organism:Listeria monocytogenes gene gene3009 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3010 SN35N_3011 SN35N_3011 SN35N_3011 3123687 3124406 + short-chain dehydrogenase/oxidoreductase NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931%3B~short chain dehydrogenase%3B provisional%3B~short-chain dehydrogenase/oxidoreductase [Lactobacillus plantarum JDM1] gene gene3010 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3011 SN35N_3012 SN35N_3012 SN35N_3012 3124549 3125367 - putative pyruvate%2C phosphate dikinase regulatory protein identified by MetaGeneAnnotator%3B putative%3B~kinase/pyrophosphorylase%3B pfam03618%3B~organism:Lactobacillus plantarum ZJ316%3B~putative pyruvate%2C phosphate dikinase regulatory protein [Lactobacillus plantarum ZJ316] gene gene3011 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3012 SN35N_3013 SN35N_3013 SN35N_3013 3125600 3125788 + 30S ribosomal protein S21 30S ribosomal protein S21 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S21%3B reviewed%3B PRK00270%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3012 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3013 SN35N_3014 SN35N_3014 SN35N_3014 3125830 3126273 + GatB/YqeY domain-containing protein GatB domain%3B cl11497%3B~GatB/YqeY domain-containing protein [Lactobacillus gasseri ATCC 33323]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene3013 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3014 SN35N_3015 SN35N_3015 phoH phoH 3126606 3127583 + phosphate starvation-inducible protein PhoH-like protein%3B pfam02562%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphate starvation-inducible protein PhoH%2C predicted ATPase [signal transduction mechanisms]%3B COG1702%3B~phosphate starvation-inducible protein [Lactobacillus plantarum ZJ316] gene gene3014 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3015 SN35N_3016 SN35N_3016 SN35N_3016 3127593 3128072 + metal-binding protein identified by MetaGeneAnnotator%3B putative%3B~metal-binding heat shock protein%3B provisional%3B~metal-binding protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene3015 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3016 SN35N_3017 SN35N_3017 SN35N_3017 3128203 3128472 + diacylglycerol kinase diacylglycerol kinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~prokaryotic diacylglycerol kinase%3B pfam01219 gene gene3016 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3017 SN35N_3018 SN35N_3018 era era 3128513 3129421 + GTP-binding protein Era E. coli Ras-like protein (Era) is a multifunctional GTPase%3B cd04163%3B~G1 box%3B~GTP-binding protein Era [Streptococcus pneumoniae 6 70- 6B]%3B~GTP/Mg2+ binding site [chemical binding]%3B~GTPase Era%3B reviewed%3B PRK00089%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus pneumoniae 670-6B gene gene3017 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3018 SN35N_3019 SN35N_3019 recO recO 3129440 3130228 + DNA repair protein RecO DNA repair protein RecO [Lactobacillus plantarum ZJ316]%3B~DNA repair protein RecO%3B TIGR00613%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~recombination protein O C terminal%3B pfam02565%3B~recombination protein O N terminal%3B pfam11967 gene gene3018 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3019 SN35N_3020 SN35N_3020 SN35N_3020 3130551 3131450 + glycyl-tRNA synthetase subunit alpha dimer interface [polypeptide binding]%3B~glycyl-tRNA synthetase subunit alpha [Lactobacillus rhamnosus GG]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3019 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3020 SN35N_3021 SN35N_3021 glyS glyS 3131450 3133534 + glycine-tRNA ligase%2C beta chain glycine-tRNA ligase%2C beta chain [Lactobacillus plantarum JDM1]%3B~glycyl-tRNA synthetase subunit beta%3B validated%3B PRK01233%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene3020 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3021 SN35N_3022 SN35N_3022 dnaG dnaG 3133791 3135671 + DNA primase CHC2 zinc finger%3B pfam01807%3B~DNA primase [Lactobacillus plantarum ZJ316]%3B~DNA primase catalytic core%2C N-terminal domain%3B pfam08275%3B~DNA primase%3B validated%3B PRK05667%3B~PE-PPE domain%3B pfam08237%3B~identified by MetaGeneAnnotator%3B putative%3B~interdomain interaction site%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316 gene gene3021 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3022 SN35N_3023 SN35N_3023 SN35N_3023 3135753 3136859 + RNA polymerase sigma factor RpoD DNA binding residues [nucleotide binding]%3B~RNA polymerase sigma factor RpoD [Lactobacillus rhamnosus GG]%3B~RNA polymerase sigma factor RpoD%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~sigma-70 factor%2C region 1.2%3B pfam00140%3B~sigma-70 region 2%3B pfam04542%3B~sigma-70 region 3%3B pfam04539%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3022 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3023 SN35N_3024 SN35N_3024 SN35N_3024 3137617 3138006 + acetoin transport repressor%2C GntR family DNA-binding site [nucleotide binding]%3B~acetoin transport repressor%2C GntR family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted transcriptional regulators [transcription]%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cd07377 gene gene3023 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3024 SN35N_3025 SN35N_3025 SN35N_3025 3137990 3138883 + ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum ST-I II]%3B~ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~walker A/P-loop%3B~walker B gene gene3024 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3025 SN35N_3026 SN35N_3026 SN35N_3026 3138885 3139955 + ABC transporter%2C permease ABC transporter%2C permease [Lactobacillus plantarum subsp. plantarum ST-III]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III gene gene3025 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3026 SN35N_3027 SN35N_3027 SN35N_3027 3139952 3141010 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene3026 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3027 SN35N_3028 SN35N_3028 SN35N_3028 3141083 3141835 - ABC transporter%2C permease protein ABC transporter%2C permease protein [Lactobacillus plantarum ZJ316]%3B~ABC-2 family transporter protein%3B pfam12679%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3027 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3028 SN35N_3029 SN35N_3029 SN35N_3029 3141849 3142748 - ABC transporter ATP-binding protein ABC transporter ATP-binding protein [Lactobacillus plantarum JDM1]%3B~ABC transporter signature motif%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~gallidermin-class lantibiotic protection ABC transporter%2C ATP-binding subunit%3B TIGR03740%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~walker A/P-loop%3B~walker B gene gene3028 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3029 SN35N_3030 SN35N_3030 SN35N_3030 3143329 3143742 + hypothetical protein hypothetical protein zj316_1937 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF2992)%3B pfam11208 gene gene3029 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3030 SN35N_3031 SN35N_3031 SN35N_3031 3143994 3144161 + hypothetical protein hypothetical protein zj316_1935 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3030 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3031 SN35N_3032 SN35N_3032 SN35N_3032 3144493 3145149 - membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted membrane protein [function unknown] gene gene3031 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3032 SN35N_3033 SN35N_3033 SN35N_3033 3145158 3145625 - transcription regulator MarR family%3B pfam01047%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~protein of unknown function (DUF1052)%3B cl02197%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene3032 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3033 SN35N_3034 SN35N_3034 SN35N_3034 3145654 3146121 - acetyltransferase%2C GNAT family N-acyltransferase superfamily: various enzymes that characteristically catalyze the transfer of an acyl group to a substrate%3B cd04301%3B~acetyltransferase (GNAT) domain%3B pfam13673%3B~acetyltransferase%2C GNAT family [Lactobacillus plantarum ZJ316]%3B~coenzyme A binding pocket [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3033 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3034 SN35N_3035 SN35N_3035 SN35N_3035 3146415 3146564 + membrane protein identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene3034 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3035 SN35N_3036 SN35N_3036 SN35N_3036 3146768 3147655 + multidrug ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC-type multidrug transport system%2C ATPase component [defense mechanisms]%3B COG1131%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the drug resistance transporter and related proteins%2C subfamily A%3B cd03230%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~multidrug ABC transporter%2C ATP-binding protein [Lactobacillus plantarum ZJ316]%3B~organism:Lactobacillus plantarum ZJ316%3B~walker A/P-loop%3B~walker B gene gene3035 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3036 SN35N_3037 SN35N_3037 SN35N_3037 3147652 3148422 + ABC transporter permease ABC transporter permease [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene3036 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3037 SN35N_3038 SN35N_3038 hpk6 hpk6 3148406 3149509 + histidine protein kinase%3B sensor protein histidine kinase-%2C DNA gyrase B-%2C and HSP90-like ATPase%3B pfam02518%3B~histidine kinase%3B pfam07730%3B~histidine protein kinase%3B sensor protein [Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~signal transduction histidine kinase [signal transduction mechanisms] gene gene3037 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3038 SN35N_3039 SN35N_3039 rrp6 rrp6 3149519 3150124 + response regulator DNA binding residues [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~intermolecular recognition site%3B~organism:Lactobacillus plantarum JDM1%3B~phosphorylation site [posttranslational modification]%3B~response regulator [Lactobacillus plantarum JDM1]%3B~response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [signal transduction mechanisms / transcription]%3B COG2197 gene gene3038 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3039 SN35N_3040 SN35N_3040 nox4 nox4 3150279 3151685 + NADH oxidase NADH oxidase [Lactobacillus plantarum subsp. plantarum P-8]%3B~coenzyme A disulfide reductase%3B reviewed%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene3039 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3040 SN35N_3041 SN35N_3041 SN35N_3041 3151865 3152113 + cell surface hydrolase%2C membrane-bound cell surface hydrolase%2C membrane-bound [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene3040 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3041 SN35N_3042 SN35N_3042 SN35N_3042 3152208 3153152 - oxidoreductase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases%3B cd05289%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1]%3B~putative NAD(P) binding site [chemical binding] gene gene3041 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3042 SN35N_3043 SN35N_3043 SN35N_3043 3153316 3154206 - transcription regulator%2C LysR family dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~putative DNA binding site [nucleotide binding]%3B~putative Zn2+ binding site [ion binding]%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene3042 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3043 SN35N_3044 SN35N_3044 SN35N_3044 3154422 3154856 + hypothetical protein hypothetical protein zj316_1921 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2255)%3B pfam10012 gene gene3043 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3044 SN35N_3045 SN35N_3045 SN35N_3045 3154859 3155500 + oxidoreductase NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase[Lactobacillus plantarum JDM1]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene3044 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3045 SN35N_3046 SN35N_3046 SN35N_3046 3155639 3156493 + cell surface hydrolase alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~cell surface hydrolase[Lactobacillus plantarum JDM1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene3045 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3046 SN35N_3047 SN35N_3047 SN35N_3047 3156825 3157538 + RpiR family transcriptional regulator RpiR family transcriptional regulator [Lactobacillus plantarum subsp. plantarum P-8]%3B~helix-turn-helix domain%2C rpiR family%3B pfam01418%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative active site [active]%3B~transcriptional regulators [transcription]%3B COG1737 gene gene3046 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3047 SN35N_3048 SN35N_3048 SN35N_3048 3157612 3158217 + galactoside O-acetyltransferase CoA binding site [chemical binding]%3B~galactoside O-acetyltransferase [Bacteroides fragil is YCH46]%3B~identified by MetaGeneAnnotator%3B putative%3B~maltose O-acetyltransferase%3B provisional%3B~organism:Bacteroides fragilis YCH46%3B~similar to gp:AL935257_180 [Lactobacillus plantarum WCFS1]%2C percent identity 65 in 199 aa%2C BLASTP E(): 7e-75%3B~substrate binding site [chemical binding]%3B~trimer interface [polypeptide binding] gene gene3047 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3048 SN35N_3049 SN35N_3049 SN35N_3049 3158210 3158842 + phosphohydrolase identified by MetaGeneAnnotator%3B putative%3B~motif II%3B~organism:Lactobacillus plantarum WCFS1%3B~phosphohydrolase [Lactobacillus plantarum WCFS1]%3B~predicted phosphatases [general function prediction only]%3B COG0546 gene gene3048 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3049 SN35N_3050 SN35N_3050 SN35N_3050 3159806 3160486 + cellobiose-specific PTS system IIC component cellobiose-specific PTS system IIC component [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~phosphotransferase system cellobiose-specific component IIC [carbohydrate transport and metabolism]%3B COG1455 gene gene3049 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3050 SN35N_3051 SN35N_3051 isp2 isp2 3160789 3162333 + transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13751%3B~transposase [Lactobacillus plantarum JDM1]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene3050 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3051 SN35N_3052 SN35N_3052 SN35N_3052 3162435 3162854 + cellobiose-specific PTS system IIC component cellobiose-specific PTS system IIC component [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene3051 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3052 SN35N_3053 SN35N_3053 SN35N_3053 3162900 3163202 + alpha/beta hydrolase superfamily protein%2C DUF915 family alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~alpha/beta hydrolase superfamily protein%2C DUF915 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3052 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3053 SN35N_3054 SN35N_3054 SN35N_3054 3163226 3164113 - transposase HTH-like domain%3B pfam13276%3B~OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13333%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative transposase OrfB%3B reviewed gene gene3053 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3054 SN35N_3055 SN35N_3055 SN35N_3055 3164110 3164640 - transposase helix-turn-helix domain%3B pfam13518%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~winged helix-turn helix%3B pfam13551 gene gene3054 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3055 SN35N_3056 SN35N_3056 SN35N_3056 3164958 3165209 + alpha/beta hydrolase superfamily protein%2C DUF915 family alpha/beta hydrolase of unknown function (DUF915)%3B pfam06028%3B~alpha/beta hydrolase superfamily protein%2C DUF915 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3055 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3056 SN35N_3057 SN35N_3057 SN35N_3057 3165350 3166381 - putative transposase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene3056 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3057 SN35N_3058 SN35N_3058 SN35N_3058 3166742 3166903 + hypothetical protein hypothetical protein zj316_1909 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3057 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3058 SN35N_3059 SN35N_3059 SN35N_3059 3167576 3168109 - transcriptional regulator%2C AcrR family DNA-binding interface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcriptional regulator [transcription]%3B COG1309%3B~transcriptional regulator%2C AcrR family [Lactobacillus plantarum ZJ316] gene gene3058 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3059 SN35N_3060 SN35N_3060 SN35N_3060 3168284 3169558 - putative ATP synthase F0%2C A subunit identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene3059 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3060 SN35N_3061 SN35N_3061 SN35N_3061 3169717 3170268 + TetR family transcriptional regulator TetR family transcriptional regulator [Lactobacillus plantarum 16]%3B~bacterial regulatory proteins%2C tetR family%3B pfam00440%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene3060 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3061 SN35N_3062 SN35N_3062 SN35N_3062 3170771 3172450 + hypothetical protein hypothetical protein zj316_1905 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tetratricopeptide repeat protein%3B provisional%3B~uncharacterized conserved protein [function unknown] gene gene3061 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3062 SN35N_3063 SN35N_3063 SN35N_3063 3172886 3173218 + oxidoreductase%2C atypical SDR family%2C subgroup 6 NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase%2C atypical SDR family%2C subgroup 6 [Lactobacillus plantarum ZJ316]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene3062 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3063 SN35N_3064 SN35N_3064 SN35N_3064 3173270 3173518 + oxidoreductase%2C atypical SDR family%2C subgroup 6 NAD(P) binding site [chemical binding]%3B~NADH(P)-binding%3B pfam13460%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~oxidoreductase%2C atypical SDR family%2C subgroup 6 [Lactobacillus plantarum ZJ316]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene3063 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3064 SN35N_3065 SN35N_3065 SN35N_3065 3173748 3174137 + hypothetical protein hypothetical protein zj316_1902 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1722)%3B pfam08349 gene gene3064 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3065 SN35N_3066 SN35N_3066 nrpR2 nrpR2 3174303 3174704 + negative regulator of proteolysis ArsC family%3B pfam03960%3B~identified by MetaGeneAnnotator%3B putative%3B~negative regulator of proteolysis [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative catalytic residues [active]%3B~thiol/disulfide switch gene gene3065 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3066 SN35N_3067 SN35N_3067 mutT mutT 3174904 3175509 - phosphohydrolase%2C MutT/nudix family hydrolase of X-linked nucleoside diphosphate N terminal%3B pfam12535%3B~identified by MetaGeneAnnotator%3B putative%3B~nudix motif%3B~organism:Lactobacillus plantarum ZJ316%3B~phosphohydrolase%2C MutT/nudix family [Lactobacillus plantarum ZJ316] gene gene3066 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3067 SN35N_3068 SN35N_3068 SN35N_3068 3175525 3176277 - DeoR family transcriptional regulator DeoR C terminal sensor domain%3B pfam00455%3B~DeoR family transcriptional regulator [Lactobacillus plantarum WCFS1]%3B~DeoR-like helix-turn-helix domain%3B cl17531%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~transcriptional regulators of sugar metabolism [transcription / carbohydrate transport and metabolism]%3B COG1349 gene gene3067 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3068 SN35N_3069 SN35N_3069 nox3 nox3 3176470 3177150 + NADH oxidase CoA-disulfide reductase%3B TIGR03385%3B~NADH oxidase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~pyridine nucleotide-disulphide oxidoreductase%3B pfam00070 gene gene3068 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3069 SN35N_3070 SN35N_3070 nox3 nox3 3177169 3178161 + NADH oxidase CoA-disulfide reductase%3B TIGR03385%3B~NADH oxidase [Lactobacillus plantarum ZJ316]%3B~active site residue [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~pyridine nucleotide-disulphide oxidoreductase%2C dimerisation domain%3B pfam02852 gene gene3069 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3070 SN35N_3071 SN35N_3071 dapE1 dapE1 3178282 3179427 + succinyl-diaminopimelate desuccinylase dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum WCFS1%3B~peptidase M20 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE)-like%3B cd08659%3B~succinyl-diaminopimelate desuccinylase [Lactobacillus plantarum WCFS1]%3B~succinyl-diaminopimelate desuccinylase%3B reviewed gene gene3070 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3071 SN35N_3072 SN35N_3072 SN35N_3072 3179497 3179946 - transcription regulator%2C MarR family MarR family%3B pfam12802%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene3071 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3072 SN35N_3073 SN35N_3073 SN35N_3073 3180112 3181506 + transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene3072 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3073 SN35N_3074 SN35N_3074 eno eno 3181680 3182969 + enolase catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis%3B derived by automated computational analysis using gene prediction method: protein homology.%3B~enolase [Listeria monocytogenes]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Listeria monocytogenes gene gene3073 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3074 SN35N_3075 SN35N_3075 mntA mntA 3183037 3185313 + cadmium-/manganese-transporting P-type ATPase E1-E2 ATPase%3B pfam00122%3B~cadmium-/manganese-transporting P-type ATPase [Lactobacillus plantarum JDM1]%3B~cation transporter/ATPase%2C N-terminus%3B cl02930%3B~haloacid dehalogenase-like hydrolase%3B pfam12710%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~plasma-membrane proton-efflux P-type ATPase%3B TIGR01647%3B~soluble P-type ATPase [general function prediction only] gene gene3074 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3075 SN35N_3076 SN35N_3076 SN35N_3076 3185424 3186398 + oxidoreductase NADPH:quinone reductase and related Zn-dependent oxidoreductases [energy production and conversion / general function prediction only]%3B COG0604%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~oxidoreductase [Lactobacillus plantarum JDM1]%3B~putative NAD(P) binding site [chemical binding]%3B~quinone oxidoreductase (QOR)%3B cd08243 gene gene3075 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3076 SN35N_3077 SN35N_3077 SN35N_3077 3186407 3186580 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ATCC 14917 gene gene3076 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3077 SN35N_3078 SN35N_3078 SN35N_3078 3186729 3187835 + membrane protein acyltransferase family%3B pfam01757%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene3077 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3078 SN35N_3079 SN35N_3079 SN35N_3079 3188161 3189306 - lipoprotein identified by MetaGeneAnnotator%3B putative%3B~lipoprotein [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1 gene gene3078 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3079 SN35N_3080 SN35N_3080 SN35N_3080 3189649 3190182 + transcription regulator MarR family%3B cl17246%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1%3B~transcription regulator [Lactobacillus plantarum JDM1] gene gene3079 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3080 SN35N_3081 SN35N_3081 SN35N_3081 3190175 3190543 + hypothetical protein active site residue [active]%3B~hypothetical protein zj316_1886 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3080 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3081 SN35N_3082 SN35N_3082 pps pps 3190973 3193369 + phosphoenolpyruvate synthase PEP-utilising enzyme%2C TIM barrel domain%3B pfam02896%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~phosphoenolpyruvate synthase [Lactobacillus plantarum subsp. plantarum ST-III]%3B~phosphoenolpyruvate synthase%3B validated%3B~phosphohistidine swiveling domain [signal transduction mechanisms]%3B~pyruvate phosphate dikinase%2C PEP/pyruvate binding domain%3B pfam01326 gene gene3081 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3082 SN35N_3083 SN35N_3083 SN35N_3083 3193524 3194030 - transcription regulator%2C MarR family MarR family%3B pfam12802%3B~helix_turn_helix multiple antibiotic resistance protein%3B smart00347%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~transcription regulator%2C MarR family [Lactobacillus plantarum ZJ316] gene gene3082 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3083 SN35N_3084 SN35N_3084 drrA drrA 3194205 3195146 + ABC transporter%2C ATP-binding protein ABC transporter signature motif%3B~ABC transporter%2C ATP-binding protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~daunorubicin resistance ABC transporter ATP-binding subunit%3B TIGR01188%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene3083 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3084 SN35N_3085 SN35N_3085 drrB drrB 3195161 3195931 + ABC transporter%2C permease protein%2C daunorubicin resistance family B ABC transporter%2C permease protein%2C daunorubicin resistance family B [Lactobacillus plantarum WCFS1]%3B~ABC-2 type transporter%3B pfam01061%3B~ABC-type multidrug transport system%2C permease component [defense mechanisms]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene3084 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3085 SN35N_3086 SN35N_3086 SN35N_3086 3196037 3196828 - integral membrane protein O-antigen ligase%3B pfam04932%3B~identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8 gene gene3085 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3086 SN35N_3087 SN35N_3087 SN35N_3087 3197019 3197300 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene3086 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3087 SN35N_3088 SN35N_3088 SN35N_3088 3197796 3198503 + S-adenosyl-L-methionine-dependent methyltransferase S-adenosyl-L-methionine-dependent methyltransferase [Lactobacillus plantarum subsp. plantarum P-8]%3B~family of unknown function (DUF633)%3B pfam04816%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~predicted SAM-dependent methyltransferase [general function prediction only] gene gene3087 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3088 SN35N_3089 SN35N_3089 SN35N_3089 3198490 3199512 + hypothetical protein NIF3 (NGG1p interacting factor 3)%3B pfam01784%3B~hypothetical protein zj316_1879 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized conserved protein [function unknown] gene gene3088 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3089 SN35N_3090 SN35N_3090 pepT pepT 3199551 3200789 + peptidase T M20 peptidase T specifically cleaves tripeptides%3B cd03892%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding site [ion binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~peptidase T [Lactobacillus plantarum ZJ316]%3B~peptidase T%3B TIGR01882 gene gene3089 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3090 SN35N_3091 SN35N_3091 SN35N_3091 3200906 3203509 + chaperone ClpB ATP binding site [chemical binding]%3B~ATP-dependent chaperone ClpB%3B TIGR03346%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B cl11083%3B~Clp amino terminal domain%3B pfam02861%3B~arginine finger%3B~chaperone ClpB [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~walker A motif%3B~walker B motif gene gene3090 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3091 SN35N_3092 SN35N_3092 SN35N_3092 3204166 3204366 - integral membrane protein identified by MetaGeneAnnotator%3B putative%3B~integral membrane protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~protein of unknown function (DUF2929)%3B pfam11151 gene gene3091 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3092 SN35N_3093 SN35N_3093 dnaE dnaE 3204727 3208077 + DNA-directed DNA polymerase III alpha chain DNA polymerase III%2C alpha subunit [DNA replication%2C recombination%2C and repair]%3B COG0587%3B~DNA-directed DNA polymerase III%2C alpha chain [Lactobacillus plantarum ZJ316]%3B~PHP Thumb interface [polypeptide binding]%3B~generic binding surface I%3B~generic binding surface II%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~polymerase and histidinol phosphatase domain of alpha-subunit of bacterial polymerase III%3B cd07431 gene gene3092 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3093 SN35N_3094 SN35N_3094 SN35N_3094 3208191 3209153 + 6-phosphofructokinase 6-phosphofructokinase [Enterococcus casseliflavus E C20]%3B~ADP/pyrophosphate binding site [chemical binding]%3B~allosteric effector site%3B~dimerization interface [polypeptide binding]%3B~fructose-1%2C6-bisphosphate binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus casseliflavus EC20 gene gene3093 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3094 SN35N_3095 SN35N_3095 SN35N_3095 3209239 3210999 + pyruvate kinase domain interfaces%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~phosphohistidine swiveling domain [signal transduction mechanisms]%3B~pyruvate kinase [Lactobacillus rhamnosus GG]%3B~pyruvate kinase%3B provisional%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3094 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3095 SN35N_3096 SN35N_3096 SN35N_3096 3211972 3212430 + UPF0756 membrane protein UPF0756 membrane protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF441)%3B pfam04284 gene gene3095 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3096 SN35N_3097 SN35N_3097 SN35N_3097 3212486 3213373 + RNA-binding protein RNA-binding protein [Lactobacillus plantarum ZJ316]%3B~S1 domain%3B pfam13509%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted RNA-bindining protein (contains S1 and HTH domains) [general function prediction only] gene gene3096 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3097 SN35N_3098 SN35N_3098 SN35N_3098 3213348 3214271 + integrase/recombinase Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase/recombinase [Lactobacillus plantarum subsp. plantarum P-8]%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~tyrosine recombinase XerD%3B TIGR02225 gene gene3097 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3098 SN35N_3099 SN35N_3099 ribT ribT 3214310 3214693 + riboflavin biosynthesis protein RibT identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~riboflavin biosynthesis protein RibT [Lactobacillus plantarum ZJ316] gene gene3098 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3099 SN35N_3100 SN35N_3100 SN35N_3100 3214659 3215426 + segregation and condensation protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~segregation and condensation protein A%3B reviewed%3B PRK00104%3B~segregation and condensation protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene3099 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3100 SN35N_3101 SN35N_3101 SN35N_3101 3215413 3216012 + segregation and condensation protein B identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~segregation and condensation protein B [Lactobacillus plantarum subsp. plantarum P-8]%3B~segregation and condensation protein B%3B reviewed%3B PRK00135 gene gene3100 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3101 SN35N_3102 SN35N_3102 SN35N_3102 3216012 3216728 + 16S rRNA uridine-516 pseudouridylate synthase related enzyme 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [translation%2C ribosomal structure and biogenesis]%3B COG1187%3B~16S rRNA uridine-516 pseudouridylate synthase relat ed enzyme [Lactobacillus gasseri ATCC 33323]%3B~RNA binding surface [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~pseudouridine synthases%2C RsuA subfamily%3B cd02870 gene gene3101 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3102 SN35N_3103 SN35N_3103 SN35N_3103 3217029 3217613 + riboflavin transporter identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~predicted membrane protein [function unknown]%3B~protein of unknown function (DUF3816)%3B pfam12822%3B~riboflavin transporter [Lactobacillus plantarum ZJ316] gene gene3102 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3103 SN35N_3104 SN35N_3104 SN35N_3104 3217949 3218992 + hypothetical protein hypothetical protein zj316_1863 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria [function unknown] gene gene3103 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3104 SN35N_3105 SN35N_3105 recQ2 recQ2 3218979 3220418 + ATP-dependent DNA helicase RecQ ATP binding site [chemical binding]%3B~ATP-binding site [chemical binding]%3B~ATP-dependent DNA helicase RecQ [Lactobacillus plantarum ZJ316]%3B~DEAD-like helicases superfamily. a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. this domain contains the ATP-binding region%3B cd00046%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding region [chemical binding]%3B~organism:Lactobacillus plantarum ZJ316%3B~putative Mg++ binding site [ion binding]%3B~superfamily II DNA helicase [DNA replication%2C recombination%2C and repair]%3B COG0514 gene gene3104 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3105 SN35N_3106 SN35N_3106 SN35N_3106 3220480 3221112 + extracellular protein%2C with LysM peptidoglycan binding domain extracellular protein%2C with LysM peptidoglycan binding domain [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118%3B~organism:Lactobacillus plantarum ZJ316 gene gene3105 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3106 SN35N_3107 SN35N_3107 SN35N_3107 3221147 3221833 + cytidylate kinase CMP-binding site%3B~cytidylate kinase [Lactobacillus rhamnosus GG]%3B~cytidylate kinase%3B provisional%3B PRK00023%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~the sites determining sugar specificity gene gene3106 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3107 SN35N_3108 SN35N_3108 SN35N_3108 3221923 3223212 + 30S ribosomal protein S1 30S ribosomal protein S1 [Lactobacillus rhamnosus GG]%3B~30S ribosomal protein S1%3B reviewed%3B PRK06676%3B~RNA binding site [nucleotide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3107 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3108 SN35N_3109 SN35N_3109 SN35N_3109 3223347 3224657 + GTP-binding protein EngA EngA1 GTPase contains the first domain of EngA%3B cd01894%3B~EngA2 GTPase contains the second domain of EngA%3B cd01895%3B~GTP-binding protein Der%3B reviewed%3B~GTP-binding protein EngA [Lactobacillus rhamnosus GG]%3B~GTP/Mg2+ binding site [chemical binding]%3B~Switch I region%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3108 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3109 SN35N_3110 SN35N_3110 SN35N_3110 3224908 3225183 + nucleoid DNA-binding protein IHF - DNA interface [nucleotide binding]%3B~IHF dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleoid DNA-binding protein [Lactobacillus gasseri ATCC 33323]%3B~organism:Lactobacillus gasseri ATCC 33323 gene gene3109 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3110 SN35N_3111 SN35N_3111 SN35N_3111 3225395 3226663 + tetratricopeptide (TPR) domain protein TPR motif%3B~anaphase-promoting complex%2C cyclosome%2C subunit 3%3B pfam12895%3B~binding surface%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tetratricopeptide (TPR) domain protein [Lactobacillus plantarum ZJ316] gene gene3110 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3111 SN35N_3112 SN35N_3112 SN35N_3112 3226774 3227571 + HAD superfamily hydrolase HAD superfamily hydrolase [Lactobacillus plantarum JDM1]%3B~haloacid dehalogenase-like hydrolase%3B pfam08282%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum JDM1 gene gene3111 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3112 SN35N_3113 SN35N_3113 dapB dapB 3227857 3228642 + dihydrodipicolinate reductase dihydrodipicolinate reductase [Lactobacillus plantarum ZJ316]%3B~dihydrodipicolinate reductase%2C C-terminus%3B pfam05173%3B~dihydrodipicolinate reductase%2C N-terminus%3B pfam01113%3B~dihydrodipicolinate reductase%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3112 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3113 SN35N_3114 SN35N_3114 cca cca 3228639 3229862 + CCA-adding enzyme CCA-adding enzyme [Lactobacillus plantarum ZJ316]%3B~NTP binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal binding triad [ion binding]%3B~nucleotidyltransferase (NT) domain of classII CCA-adding enzymes%3B cd05398%3B~organism:Lactobacillus plantarum ZJ316%3B~probable RNA and SrmB- binding site of polymerase A%3B pfam12627%3B~tRNA CCA-pyrophosphorylase%3B provisional%3B~tRNA nucleotidyltransferase domain 2 putative%3B pfam13735 gene gene3113 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3114 SN35N_3115 SN35N_3115 SN35N_3115 3229919 3230371 + hypothetical protein hypothetical protein zj316_1851 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3114 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3115 SN35N_3116 SN35N_3116 SN35N_3116 3230557 3232467 + ABC superfamily ATP binding cassette transporter%2C ABC protein ABC superfamily ATP binding cassette transporter%2C ABC protein [Lactobacillus plantarum subsp. plantarum P-8]%3B~ABC transporter signature motif%3B~ABC transporter%3B pfam12848%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of elongation factor 3%2C subfamily F%3B cd03221%3B~ATP-binding cassette transporter nucleotide-binding domain%3B cl17201%3B~ATPase components of ABC transporters with duplicated ATPase domains [general function prediction only]%3B COG0488%3B~D-loop%3B~Q-loop/lid%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum P-8%3B~walker A/P-loop%3B~walker B gene gene3115 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3116 SN35N_3117 SN35N_3117 SN35N_3117 3232480 3233430 + thymidylate synthase dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~thymidylate synthase [Lactobacillus rhamnosus GG]%3B~thymidylate synthase%3B TIGR03284 gene gene3116 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3117 SN35N_3118 SN35N_3118 dfrA dfrA 3233440 3233931 + dihydrofolate reductase NADP+ binding site [chemical binding]%3B~dihydrofolate reductase [Lactobacillus plantarum ZJ316]%3B~dihydrofolate reductase [coenzyme metabolism]%3B COG0262%3B~folate binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3117 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3118 SN35N_3119 SN35N_3119 SN35N_3119 3234038 3234889 + DegV family protein DegV family protein [Lactobacillus plantarum ZJ316]%3B~EDD domain protein%2C DegV family%3B TIGR00762%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein%2C DegV family COG1307%3B pfam02645 gene gene3118 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3119 SN35N_3120 SN35N_3120 SN35N_3120 3235039 3235983 + extracellular lipase/acylhydrolase with GDSL-like motif catalytic triad [active]%3B~extracellular lipase/acylhydrolase with GDSL-like m otif [Lactobacillus plantarum 16]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16%3B~oxyanion hole [active] gene gene3119 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3120 SN35N_3121 SN35N_3121 SN35N_3121 3235996 3236640 + extracellular protein%2C DUF2140 family extracellular protein%2C DUF2140 family [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~uncharacterized protein conserved in bacteria (DUF2140)%3B pfam09911 gene gene3120 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3121 SN35N_3122 SN35N_3122 SN35N_3122 3236652 3236873 + UPF0346 protein UPF0346 protein [Lactobacillus plantarum ZJ316]%3B~hypothetical protein%3B provisional%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3121 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3122 SN35N_3123 SN35N_3123 ctpA ctpA 3236903 3238381 + carboxy-terminal proteinase C-terminal peptidase (prc)%3B TIGR00225%3B~C-terminal processing peptidase family S41%3B cl02526%3B~C-terminal processing peptidase%3B serine protease family S41%3B cd07560%3B~carboxy-terminal proteinase%2C S41 family%2Cpeptidoglyc an-bound [Lactobacillus plantarum ZJ316]%3B~catalytic dyad [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein binding site [polypeptide binding]%3B~putative peptidoglycan binding domain%3B pfam01471 gene gene3122 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3123 SN35N_3124 SN35N_3124 SN35N_3124 3238748 3240223 + transport protein identified by MetaGeneAnnotator%3B putative%3B~major facilitator superfamily%3B pfam07690%3B~organism:Lactobacillus plantarum JDM1%3B~putative substrate translocation pore%3B~transport protein [Lactobacillus plantarum JDM1] gene gene3123 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3124 SN35N_3125 SN35N_3125 SN35N_3125 3240497 3241555 + oxidoreductase Flavin-utilizing monoxygenases%3B cl07892%3B~coenzyme F420-dependent N5%2CN10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [energy production and conversion]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~oxidoreductase [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene3124 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3125 SN35N_3126 SN35N_3126 SN35N_3126 3241552 3242250 + NADP oxidoreductase NADP oxidoreductase%3B~NADP oxidoreductase [Lactobacillus plantarum WCFS1]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1%3B~predicted dinucleotide-binding enzymes [general function prediction only] gene gene3125 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3126 SN35N_3127 SN35N_3127 SN35N_3127 3242354 3243283 - transcription regulator%2C LysR family bacterial regulatory helix-turn-helix protein%2C lysR family%3B pfam00126%3B~dimerization interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcription regulator%2C LysR family [Lactobacillus plantarum ZJ316]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene3126 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3127 SN35N_3128 SN35N_3128 SN35N_3128 3243473 3244621 + 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase [Lactobacillus plantarum ZJ316]%3B~THF binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~substrate binding site [chemical binding]%3B~zinc-binding site [ion binding] gene gene3127 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3128 SN35N_3129 SN35N_3129 SN35N_3129 3245182 3246036 + ribosome biogenesis GTP-binding protein YlqF GTP/Mg2+ binding site [chemical binding]%3B~Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases)%3B cl17170%3B~circularly permuted YlqF GTPase%3B cd01856%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum subsp. plantarum ST-III%3B~ribosome biogenesis GTP-binding protein YlqF [Lactobacillus plantarum subsp. plantarum ST-III]%3B~ribosome biogenesis GTP-binding protein YlqF%3B TIGR03596 gene gene3128 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3129 SN35N_3130 SN35N_3130 SN35N_3130 3246029 3246796 + ribonuclease HII RNA/DNA hybrid binding site [nucleotide binding]%3B~bacterial ribonuclease HII-like%3B cd07182%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~ribonuclease HII [Lactobacillus paracasei subsp. paracasei 8700:2] gene gene3129 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3130 SN35N_3131 SN35N_3131 dprA dprA 3246875 3247741 + DNA processing protein DNA processing protein [Lactobacillus plantarum WCFS1]%3B~DNA protecting protein DprA%3B TIGR00732%3B~DNA recombination-mediator protein A%3B pfam02481%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WCFS1 gene gene3130 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3131 SN35N_3132 SN35N_3132 SN35N_3132 3247830 3249977 + DNA topoisomerase I DNA binding groove [nucleotide binding]%3B~DNA topoisomerase I [Lactobacillus rhamnosus GG]%3B~DNA topoisomerase I%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~interdomain interaction site%3B~nucleotide binding site [chemical binding]%3B~organism:Lactobacillus rhamnosus GG%3B~phosphate binding site [ion binding]%3B~putative metal-binding site [ion binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~topoisomerase DNA binding C4 zinc finger%3B pfam01396 gene gene3131 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3132 SN35N_3133 SN35N_3133 SN35N_3133 3250256 3251581 + tRNA (uracil-5-)-methyltransferase Gid glucose inhibited division protein A%3B pfam01134%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103%3B~tRNA (uracil-5-)-methyltransferase Gid [Lactobacillus rhamnosus GG]%3B~tRNA (uracil-5-)-methyltransferase Gid%3B reviewed gene gene3132 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3133 SN35N_3134 SN35N_3134 xerC xerC 3251661 3252605 + tyrosine recombinase XerC DNA binding site [nucleotide binding]%3B~Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~tyrosine recombinase XerC [Lactobacillus plantarum ZJ316]%3B~tyrosine recombinase XerC%3B TIGR02224 gene gene3133 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3134 SN35N_3135 SN35N_3135 SN35N_3135 3252589 3253131 + ATP-dependent protease hslV ATP-dependent protease hslV [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~HslU subunit interaction site [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2 gene gene3134 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3135 SN35N_3136 SN35N_3136 hslU hslU 3253149 3254567 + ATP-dependent protease ATP-binding subunit HslU ATP binding site [chemical binding]%3B~ATP-dependent protease ATP-binding subunit HslU [Lactobacillus helveticus DPC 4571]%3B~ATP-dependent protease ATP-binding subunit HslU%3B provisional%3B PRK05201%3B~C-terminal%2C D2-small domain%2C of ClpB protein%3B cl11083%3B~P-loop containing nucleoside triphosphate hydrolases%3B cl09099%3B~heat shock protein involved in degradation of misfolded proteins%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus helveticus DPC 4571%3B~walker A motif gene gene3135 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3136 SN35N_3137 SN35N_3137 SN35N_3137 3254594 3255472 + aldose 1-epimerase family protein aldose 1-epimerase family protein [Lactobacillus plantarum ZJ316]%3B~aldose 1-epimerase%2C similar to Lactococcus lactis lacX%3B cd09024%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316 gene gene3136 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3137 SN35N_3138 SN35N_3138 plsY plsY 3255667 3256293 - glycerol-3-phosphate acyltransferase glycerol-3-phosphate acyltransferase [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein%3B provisional%3B~organism:Lactobacillus plantarum ZJ316 gene gene3137 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3138 SN35N_3139 SN35N_3139 SN35N_3139 3256778 3258784 + DNA topoisomerase IV subunit B ATP binding site [chemical binding]%3B~DNA gyrase B subunit%2C carboxyl terminus%3B pfam00986%3B~DNA topoisomerase IV subunit B [Lactobacillus gasseri ATCC 33323]%3B~DNA topoisomerase IV subunit B%3B reviewed%3B~anchoring element%3B~decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus gasseri ATCC 33323%3B~putative metal-binding site [ion binding] gene gene3138 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3139 SN35N_3140 SN35N_3140 SN35N_3140 3258798 3261248 + DNA topoisomerase IV subunit A CAP-like domain%3B~DNA gyrase C-terminal domain%2C beta-propeller%3B pfam03989%3B~DNA topoisomerase IV subunit A [Lactobacillus rhamnosus GG]%3B~DNA topoisomerase IV subunit A%3B validated%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus rhamnosus GG%3B~primary dimer interface [polypeptide binding]%3B~strain coidentity: ATCC 53103 %3D GG%3B synonym:Lactobacillus rhamnosus ATCC 53103 gene gene3139 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3140 SN35N_3141 SN35N_3141 SN35N_3141 3261432 3262391 + transcriptional regulator dimerization interface [polypeptide binding]%3B~helix-turn-helix domains%3B cl00088%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paracasei subsp. paracasei 8700:2%3B~the substrate binding domain of LysR-type transcriptional regulators (LTTRs)%2C a member of the type 2 periplasmic binding fold protein superfamily%3B cd05466%3B~transcriptional regulator [Lactobacillus paracasei subsp. paracasei 8700:2]%3B~transcriptional regulator [transcription]%3B COG0583 gene gene3140 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3141 SN35N_3142 SN35N_3142 SN35N_3142 3262414 3263343 + manganese-dependent inorganic pyrophosphatase COG1227 inorganic pyrophosphatase/exopolyphosphatase%3B~DHHA2 domain%3B pfam02833%3B~identified by MetaGeneAnnotator%3B putative%3B~manganese-dependent inorganic pyrophosphatase [Lactobacillus amylovorus GRL 1112]%3B~organism:Lactobacillus amylovorus GRL 1112%3B~putative manganese-dependent inorganic pyrophosphatase%3B provisional gene gene3141 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3142 SN35N_3143 SN35N_3143 SN35N_3143 3263471 3263905 + methionine sulfoxide reductase B COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase%3B~identified by MetaGeneAnnotator%3B putative%3B~methionine sulfoxide reductase B [Lactobacillus amylovorus GRL 1112]%3B~methionine sulfoxide reductase B%3B provisional%3B~methionine sulfoxide reductase B%3B provisional%3B cl15841%3B~organism:Lactobacillus amylovorus GRL 1112 gene gene3142 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3143 SN35N_3144 SN35N_3144 SN35N_3144 3263933 3264448 + peptide methionine sulfoxide reductase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365%3B~peptide methionine sulfoxide reductase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365]%3B~peptide methionine sulfoxide reductase [posttranslational modification%2C protein turnover%2C chaperones]%3B COG0225 gene gene3143 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3144 SN35N_3145 SN35N_3145 SN35N_3145 3264612 3264812 - hypothetical protein hypothetical protein zj316_1818 [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum ZJ316%3B~protein of unknown function (DUF1250)%3B pfam06855 gene gene3144 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3145 SN35N_3146 SN35N_3146 SN35N_3146 3265025 3265879 - integrase%2C N-terminal SAM-like identified by MetaGeneAnnotator%3B putative%3B~integrase%2C N-terminal SAM-like [Lactobacillus plantarum WCFS1]%3B~organism:Lactobacillus plantarum WCFS1%3B~phage integrase%2C N-terminal SAM-like domain%3B pfam13495 gene gene3145 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_3146 SN35N_4001 SN35N_4001 SN35N_4001 880 1239 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus amylolyticus DSM 11664 gene gene3146 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4001 SN35N_4002 SN35N_4002 int2 int2 1253 1840 - tyrosine recombinase COG0582L%3B~DNA binding site [nucleotide binding]%3B~Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~tyrosine recombinase [Leuconostoc citreum KM20] gene gene3147 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4002 SN35N_4003 SN35N_4003 SN35N_4003 1918 2181 + AbrB family transcriptional regulator AbrB family transcriptional regulator [Pediococcus claussenii ATCC BAA- 344]%3B~antidote-toxin recognition MazE%3B cl00877%3B~identified by MetaGeneAnnotator%3B putative gene gene3148 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4003 SN35N_4004 SN35N_4004 SN35N_4004 2181 2528 + PemK-like family protein PemK-like family protein [Pediococcus claussenii ATCC BAA- 344]%3B~PemK-like protein%3B pfam02452%3B~identified by MetaGeneAnnotator%3B putative gene gene3149 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4004 SN35N_4005 SN35N_4005 SN35N_4005 2656 3114 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene3150 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4005 SN35N_4006 SN35N_4006 SN35N_4006 3221 5458 - putative bacteriocin activator identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene3151 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4006 SN35N_4007 SN35N_4007 SN35N_4007 6267 6563 + transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B- 30929] gene gene3152 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4007 SN35N_4008 SN35N_4008 SN35N_4008 6621 7382 - XRE family transcriptional regulator XRE family transcriptional regulator [Lactobacillus brevis ATCC 367]%3B~identified by MetaGeneAnnotator%3B putative%3B~non-specific DNA binding site [nucleotide binding]%3B~predicted transcriptional regulators [Transcription]%3B COG1396%3B~salt bridge%3B~sequence-specific DNA binding site [nucleotide binding] gene gene3153 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4008 SN35N_4009 SN35N_4009 SN35N_4009 8022 9008 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene3154 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4009 SN35N_4010 SN35N_4010 SN35N_4010 9223 9804 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene3155 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4010 SN35N_4011 SN35N_4011 SN35N_4011 10076 10510 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis KB290 gene gene3156 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4011 SN35N_4012 SN35N_4012 marR marR 10666 11424 - MarR family transcriptional regulator MarR [Lactobacillus helveticus R0052]%3B~identified by MetaGeneAnnotator%3B putative gene gene3157 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4012 SN35N_4013 SN35N_4013 SN35N_4013 11894 12370 - hypothetical protein hypothetical protein zj316_1p02 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators%3B cl17414 gene gene3158 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4013 SN35N_4014 SN35N_4014 SN35N_4014 12363 13292 - probable replication protein rep identified by MetaGeneAnnotator%3B putative%3B~initiator Replication protein%3B pfam01051%3B~probable replication protein rep [Lactobacillus bre vis KB290] gene gene3159 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4014 SN35N_4015 SN35N_4015 SN35N_4015 13999 14193 - hypothetical protein ORF-8 [Lactobacillus sakei]%3B~identified by MetaGeneAnnotator%3B putative gene gene3160 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4015 SN35N_4016 SN35N_4016 int2 int2 14567 15154 - tyrosine recombinase COG0582L%3B~DNA binding site [nucleotide binding]%3B~Int/Topo IB signature motif%3B~identified by MetaGeneAnnotator%3B putative%3B~tyrosine recombinase [Leuconostoc citreum KM20] gene gene3161 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4016 SN35N_4017 SN35N_4017 relB relB 15258 15536 + RelB RelB [Lactobacillus helveticus R0052]%3B~RelB antitoxin%3B cl01171%3B~RelE_StbE%3B~identified by MetaGeneAnnotator%3B putative gene gene3162 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4017 SN35N_4018 SN35N_4018 relE relE 15526 15828 + RelE RelE [Lactobacillus helveticus R0052]%3B~identified by MetaGeneAnnotator%3B putative%3B~plasmid stabil.%3B RelE_StbE%3B~uncharacterized protein conserved in bacteria [Function unknown]%3B cl17396 gene gene3163 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4018 SN35N_4019 SN35N_4019 SN35N_4019 15957 16169 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum gene gene3164 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4019 SN35N_4020 SN35N_4020 SN35N_4020 16365 16940 + OrfX family protein OrfX family protein [Lactobacillus plantarum subsp. plantarum P- 8]%3B~identified by MetaGeneAnnotator%3B putative%3B~protein of unknown function%2C DUF536%3B pfam04394 gene gene3165 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4020 SN35N_4021 SN35N_4021 SN35N_4021 18038 18415 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum UCMA 3037 gene gene3166 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4021 SN35N_4022 SN35N_4022 SN35N_4022 18424 18720 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B- 30929] gene gene3167 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4022 SN35N_4023 SN35N_4023 SN35N_4023 19416 19934 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum WJL gene gene3168 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4023 SN35N_4024 SN35N_4024 repB repB 20647 21246 - replication protein identified by MetaGeneAnnotator%3B putative%3B~initiator Replication protein%3B pfam01051%3B~replication protein [Lactobacillus plantarum] gene gene3169 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4024 SN35N_4025 SN35N_4025 SN35N_4025 21933 22229 + transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B- 30929] gene gene3170 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_4025 SN35N_5001 SN35N_5001 SN35N_5001 255 692 + transcription regulator MarR family%3B pfam01047%3B~identified by MetaGeneAnnotator%3B putative%3B~transcription regulator [Lactobacillus plantarum su bsp. plantarum ST- III]%3B~transcriptional regulators [transcription]%3B COG1846 gene gene3171 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5001 SN35N_5002 SN35N_5002 SN35N_5002 1070 1624 + DNA invertase DNA binding site [nucleotide binding]%3B~DNA invertase [Tetragenococcus halophilus]%3B~ORF23%3B similar to DNA invertase gene of pediococcal plasmid pMD136%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic Site I dimer interface [polypeptide binding]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic Antiparallel dimer interface [polypeptide binding]%3B~synaptic Flat tetramer interface [polypeptide binding]%3B~synaptic Site I dimer interface [polypeptide binding] gene gene3172 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5002 SN35N_5003 SN35N_5003 SN35N_5003 2528 2770 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus brevis subsp. gravesensis AT CC 27305 gene gene3173 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5003 SN35N_5004 SN35N_5004 SN35N_5004 2777 2947 - hypothetical protein hypothetical protein zj316_2p31 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3174 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5004 SN35N_5005 SN35N_5005 SN35N_5005 3019 3327 - hypothetical protein hypothetical protein zj316_2p31 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3175 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5005 SN35N_5006 SN35N_5006 repB repB 3320 4150 - plasmid copy control protein ATPases involved in chromosome partitioning [cell division and chromosome partitioning]%3B COG1192%3B~P-loop containing Nucleoside Triphosphate Hydrolases%3B cl09099%3B~identified by MetaGeneAnnotator%3B putative%3B~magnesium ion binding site [ion binding]%3B~plasmid copy control protein [Listeria grayi] gene gene3176 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5006 SN35N_5007 SN35N_5007 SN35N_5007 5268 5801 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene3177 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5007 SN35N_5008 SN35N_5008 SN35N_5008 5735 6052 - transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340%3B~transposase [Lactobacillus plantarum 16] gene gene3178 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5008 SN35N_5009 SN35N_5009 SN35N_5009 6503 7489 + lacI family transcriptional regulator DNA binding site [nucleotide binding]%3B~dimerization interface [polypeptide binding]%3B~domain linker motif%3B~helix-turn-helix (HTH) DNA binding domain of the LacI family of transcriptional regulators%3B cd01392%3B~identified by MetaGeneAnnotator%3B putative%3B~lacI family transcriptional regulator [Lactobacillu s buchneri NRRL B- 30929]%3B~ligand binding domain of the LacI tanscriptional regulator family belonging to the type I periplasmic-binding fold protein superfamily%3B cd06267%3B~ligand binding site [chemical binding]%3B~transcriptional regulators [transcription]%3B COG1609 gene gene3179 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5009 SN35N_5010 SN35N_5010 SN35N_5010 7641 7937 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B-30929] gene gene3180 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5010 SN35N_5011 SN35N_5011 SN35N_5011 8155 8340 + replication initiator A domain protein PFAM: Replication initiator A%2C N-terminal%3B KEGG: lsl:pSF118-20_06 putative replication initiation protein%3B~identified by MetaGeneAnnotator%3B putative%3B~replication initiator A domain protein [Lactobacill us buchneri NRRL B- 30929] gene gene3181 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5011 SN35N_5012 SN35N_5012 SN35N_5012 8495 8692 + hypothetical protein hypothetical protein zj316_2p31 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3182 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5012 SN35N_5013 SN35N_5013 SN35N_5013 8743 9564 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~unnamed protein product [Lactobacillus salivarius CECT 5713] gene gene3183 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5013 SN35N_5014 SN35N_5014 SN35N_5014 9554 9832 - hypothetical protein ORF18%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative%3B~protein of unknown function (DUF3847)%3B pfam12958 gene gene3184 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5014 SN35N_5015 SN35N_5015 SN35N_5015 9855 10097 - hypothetical protein ORF19%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3185 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5015 SN35N_5016 SN35N_5016 SN35N_5016 10350 12398 + conjugal transfer protein traA MobA/MobL family%3B pfam03389%3B~conjugal transfer protein traA [Lactobacillus brevi s KB290]%3B~identified by MetaGeneAnnotator%3B putative gene gene3186 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5016 SN35N_5017 SN35N_5017 SN35N_5017 12495 14630 + DNA topoisomerase C-terminal repeat of topoisomerase%3B pfam13342%3B~DNA binding groove [nucleotide binding]%3B~DNA topoisomerase III%3B Provisional%3B~DNA topoisomerase [Lactobacillus plantarum 16]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~phosphate binding site [ion binding]%3B~putative interdomain interaction site [polypeptide binding]%3B~putative metal-binding site [ion binding]%3B~putative nucleotide binding site [chemical binding] gene gene3187 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5017 SN35N_5018 SN35N_5018 SN35N_5018 14753 14968 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene3188 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5018 SN35N_5019 SN35N_5019 SN35N_5019 14972 16048 + uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 domain of unknown function (DUF955)%3B cl01076%3B~identified by MetaGeneAnnotator%3B putative%3B~uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 [Lactobacillus brevis KB290] gene gene3189 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5019 SN35N_5020 SN35N_5020 SN35N_5020 16314 16532 - transposase OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam13333%3B~putative transposase OrfB%3B Reviewed gene gene3190 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5020 SN35N_5021 SN35N_5021 SN35N_5021 16620 16946 + transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340%3B~transposase [Lactobacillus rhamnosus HN001] gene gene3191 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5021 SN35N_5022 SN35N_5022 SN35N_5022 16991 17257 + multidrug efflux pump protein identified by MetaGeneAnnotator%3B putative%3B~multidrug efflux pump protein [Lactobacillus planta rum subsp. plantarum P- 8] gene gene3192 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5022 SN35N_5023 SN35N_5023 SN35N_5023 17332 19599 - cation transport ATPase E1-E2 ATPase%3B pfam00122%3B~cation transport ATPase [Lactobacillus casei ATCC 3 34]%3B~copper-(or silver)-translocating P-type ATPase%3B TIGR01511%3B~haloacid dehalogenase-like hydrolases%3B cl11391%3B~identified by MetaGeneAnnotator%3B putative gene gene3193 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5023 SN35N_5024 SN35N_5024 SN35N_5024 19850 20281 - transcriptional regulator copper transport repressor%2C CopY/TcrY family%3B TIGR02698%3B~helix-turn-helix domains%3B cl00088%3B~identified by MetaGeneAnnotator%3B putative%3B~transcriptional regulator [Lactobacillus casei ATCC 334] gene gene3194 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5024 SN35N_5025 SN35N_5025 res res 20867 21478 + resolvase DNA binding site [nucleotide binding]%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic Site I dimer interface [polypeptide binding]%3B~resolvase [Enterococcus faecalis]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic Antiparallel dimer interface [polypeptide binding]%3B~synaptic Flat tetramer interface [polypeptide binding]%3B~synaptic Site I dimer interface [polypeptide binding] gene gene3195 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5025 SN35N_5026 SN35N_5026 kup kup 21578 23614 + potassium uptake protein K+ potassium transporter%3B pfam02705%3B~identified by MetaGeneAnnotator%3B putative%3B~potassium uptake protein [Lactobacillus plantarum s ubsp. plantarum ST- III] gene gene3196 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_5026 SN35N_6001 SN35N_6001 SN35N_6001 189 743 - DNA invertase DNA binding site [nucleotide binding]%3B~DNA invertase [Tetragenococcus halophilus]%3B~DNA-binding interface [nucleotide binding]%3B~ORF23%3B similar to DNA invertase gene of pediococcal plasmid pMD136%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic site I dimer interface [polypeptide binding]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic antiparallel dimer interface [polypeptide binding]%3B~synaptic flat tetramer interface [polypeptide binding]%3B~synaptic site I dimer interface [polypeptide binding] gene gene3197 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6001 SN35N_6002 SN35N_6002 SN35N_6002 979 2103 - glycosyltransferase%2C group 2 family protein identified by MetaGeneAnnotator%3B putative%3B~organism:bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) gene gene3198 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6002 SN35N_6003 SN35N_6003 SN35N_6003 2412 3587 + transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase [Lactobacillus plantarum subsp. plantar um P- 8]%3B~transposase%2C Mutator family%3B pfam00872 gene gene3199 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6003 SN35N_6004 SN35N_6004 SN35N_6004 3785 4354 - transposase identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13683%3B~putative transposase OrfB%3B Reviewed%3B~transposase [Lactobacillus plantarum 16] gene gene3200 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6004 SN35N_6005 SN35N_6005 SN35N_6005 4580 5509 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P- 8] gene gene3201 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6005 SN35N_6006 SN35N_6006 SN35N_6006 5704 6879 + transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase [Lactobacillus plantarum subsp. plantar um P- 8]%3B~transposase%2C Mutator family%3B pfam00872 gene gene3202 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6006 SN35N_6007 SN35N_6007 SN35N_6007 7028 7249 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2025 gene gene3203 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6007 SN35N_6008 SN35N_6008 SN35N_6008 7363 8820 - EpsN protein EpsN protein [Lactobacillus kefiranofaciens ZW3]%3B~Wzx%2C a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins%3B cd13128%3B~identified by MetaGeneAnnotator%3B putative%3B~membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]%3B COG2244 gene gene3204 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6008 SN35N_6009 SN35N_6009 SN35N_6009 8976 9410 - IS30 family transposase IS30 family transposase [Lactobacillus brevis ATCC 367]%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3205 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6009 SN35N_6010 SN35N_6010 SN35N_6010 9468 9896 - IS30 family transposase IS30 family transposase [Lactobacillus brevis ATCC 367]%3B~helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3206 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6010 SN35N_6011 SN35N_6011 epsM epsM 9977 10486 - EpsM identified by MetaGeneAnnotator%3B putative%3B~organism:Lactococcus lactis subsp. cremoris gene gene3207 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6011 SN35N_6012 SN35N_6012 SN35N_6012 10483 11274 - glycosyl transferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus fabifermentans T30PCM01 gene gene3208 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6012 SN35N_6013 SN35N_6013 SN35N_6013 11312 12220 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus vaginalis ATCC 49540 gene gene3209 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6013 SN35N_6014 SN35N_6014 SN35N_6014 12446 13462 - glycosyl transferase identified by MetaGeneAnnotator%3B putative%3B~organism:Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) gene gene3210 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6014 SN35N_6015 SN35N_6015 SN35N_6015 13452 14222 - hypothetical protein identified by MetaGeneAnnotator%3B putative gene gene3211 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6015 SN35N_6016 SN35N_6016 SN35N_6016 14209 14658 - glycerol-3-phosphate cytidylyltransferase COG0615 Cytidylyltransferase%3B~HIGH motif%3B~KMSKS motif%3B~cytidylyltransferase%3B pfam01467%3B~glycerol-3-phosphate cytidylyltransferase [Leuconos toc carnosum JB16]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~nucleotidyl transferase superfamily%3B cl00015 gene gene3212 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6016 SN35N_6017 SN35N_6017 cpsF cpsF 14661 15809 - CpsF identified by MetaGeneAnnotator%3B putative%3B~organism:Streptococcus thermophilus gene gene3213 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6017 SN35N_6018 SN35N_6018 SN35N_6018 15836 16531 - priming glycosyl transferase bacterial sugar transferase%3B pfam02397%3B~exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase%3B TIGR03025%3B~identified by MetaGeneAnnotator%3B putative%3B~priming glycosyl transferase [Lactobacillus sakei s ubsp. sakei 23K] gene gene3214 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6018 SN35N_6019 SN35N_6019 SN35N_6019 16578 17516 - putative UDP-glucose 4-epimerase NAD(P) binding site [chemical binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~putative UDP-glucose 4-epimerase [Lactobacillus pla ntarum ZJ316]%3B~rossmann-fold NAD(P)(+)-binding proteins%3B cl09931 gene gene3215 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6019 SN35N_6020 SN35N_6020 SN35N_6020 17541 17831 - putative protein-tyrosine-phosphatase identified by MetaGeneAnnotator%3B putative%3B~putative protein-tyrosine-phosphatase [Lactobacillu s plantarum ZJ316] gene gene3216 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6020 SN35N_6021 SN35N_6021 iso-IS3 iso-IS3 17857 18513 - insertion element DDE domain%3B pfam13610%3B~HTH-like domain%3B pfam13276%3B~identified by MetaGeneAnnotator%3B putative%3B~insertion element [Lactobacillus casei BL23]%3B~integrase core domain%3B pfam00665%3B~integrase core domain%3B pfam13683 gene gene3217 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6021 SN35N_6022 SN35N_6022 SN35N_6022 18786 19037 - transposase identified by MetaGeneAnnotator%3B putative%3B~transposase [Lactobacillus casei ATCC 334]%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair]%3B~transposase%3B pfam01527 gene gene3218 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6022 SN35N_6023 SN35N_6023 cps2C cps2C 19596 20384 - polysaccharide biosynthesis protein%2C phosphotyrosine-protein phosphatase identified by MetaGeneAnnotator%3B putative%3B~polymerase and Histidinol Phosphatase domain%3B cl17102%3B~polysaccharide biosynthesis protein%2C phosphotyrosin e-protein phosphatase [Lactobacillus plantarum ZJ316] gene gene3219 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6023 SN35N_6024 SN35N_6024 cps2B cps2B 20356 21084 - polysaccharide biosynthesis protein%2C regulator capsular exopolysaccharide family%3B TIGR01007%3B~identified by MetaGeneAnnotator%3B putative%3B~polysaccharide biosynthesis protein%2Cregulator [Lact obacillus plantarum ZJ316] gene gene3220 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6024 SN35N_6025 SN35N_6025 cps2A cps2A 21096 21863 - polysaccharide biosynthesis protein%2C chain length regulator capsular polysaccharide biosynthesis protein [cell envelope biogenesis%2C outer membrane]%3B~chain length determinant protein%3B cl15801%3B~identified by MetaGeneAnnotator%3B putative%3B~polysaccharide biosynthesis protein%2C chain length r egulator [Lactobacillus plantarum ZJ316] gene gene3221 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6025 SN35N_6026 SN35N_6026 SN35N_6026 22111 22575 - 1%2C6-galactosyltransferase identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus paraplantarum gene gene3222 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6026 SN35N_6027 SN35N_6027 SN35N_6027 22728 22919 + prophage Lp1 protein 60 bacteriophage holin%3B cl02344%3B~identified by MetaGeneAnnotator%3B putative%3B~prophage Lp1 protein 60 [Lactobacillus plantarum su bsp. plantarum P-8] gene gene3223 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6027 SN35N_6028 SN35N_6028 SN35N_6028 23174 24349 - transposase MULE transposase domain%3B pfam10551%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase [Lactobacillus plantarum subsp. plantar um P- 8]%3B~transposase%2C Mutator family%3B pfam00872 gene gene3224 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6028 SN35N_6029 SN35N_6029 SN35N_6029 24585 26720 - DNA topoisomerase C-terminal repeat of topoisomerase%3B pfam13342%3B~DNA binding groove [nucleotide binding]%3B~DNA topoisomerase III%3B Provisional%3B~DNA topoisomerase [Lactobacillus plantarum 16]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~phosphate binding site [ion binding]%3B~putative interdomain interaction site [polypeptide binding]%3B~putative metal-binding site [ion binding]%3B~putative nucleotide binding site [chemical binding] gene gene3225 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6029 SN35N_6030 SN35N_6030 SN35N_6030 26817 27374 - plasmid mobilization protein%2C mobA/MobL family identified by MetaGeneAnnotator%3B putative%3B~plasmid mobilization protein%2C mobA/MobL family [Ped iococcus claussenii ATCC BAA- 344] gene gene3226 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6030 SN35N_6031 SN35N_6031 SN35N_6031 27397 28881 - conjugal transfer protein traA MobA/MobL family%3B pfam03389%3B~conjugal transfer protein traA [Lactobacillus brevi s KB290]%3B~identified by MetaGeneAnnotator%3B putative gene gene3227 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6031 SN35N_6032 SN35N_6032 SN35N_6032 29153 29362 + hypothetical protein ORF19%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3228 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6032 SN35N_6033 SN35N_6033 SN35N_6033 29385 29663 + hypothetical protein ORF18%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative%3B~protein of unknown function (DUF3847)%3B pfam12958 gene gene3229 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6033 SN35N_6034 SN35N_6034 pemK pemK 29653 29967 - addiction module toxin%2C PemK-like protein ORF17%3B~addiction module toxin%2C PemK-like protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3230 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6034 SN35N_6035 SN35N_6035 pemK pemK 29977 30159 - addiction module toxin%2C PemK-like protein ORF17%3B~addiction module toxin%2C PemK-like protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3231 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6035 SN35N_6036 SN35N_6036 SN35N_6036 30149 30430 - antitoxin of toxin-antitoxin stability system%2C RelB family RelB antitoxin%3B cl01171%3B~antitoxin of toxin-antitoxin stability system%2C RelB family [Pediococcus claussenii ATCC BAA-344]%3B~identified by MetaGeneAnnotator%3B putative gene gene3232 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6036 SN35N_6037 SN35N_6037 repA repA 30684 30920 - replication initiator protein A ORF15%3B~identified by MetaGeneAnnotator%3B putative%3B~replication initiator protein A [Oenococcus oeni] gene gene3233 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6037 SN35N_6038 SN35N_6038 SN35N_6038 31240 31572 - hypothetical protein hypothetical protein zj316_2p25 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3234 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6038 SN35N_6039 SN35N_6039 SN35N_6039 32290 33075 + chromosome partitioning ATPase ATPases involved in chromosome partitioning [cell division and chromosome partitioning]%3B COG1192%3B~chromosome partitioning ATPase [Lactobacillus brevis ATCC 367]%3B~identified by MetaGeneAnnotator%3B putative%3B~magnesium ion binding site [ion binding] gene gene3235 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6039 SN35N_6040 SN35N_6040 SN35N_6040 33079 33318 + hypothetical protein hypothetical protein zj316_3p28 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3236 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6040 SN35N_6041 SN35N_6041 SN35N_6041 33664 34008 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P- 8] gene gene3237 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6041 SN35N_6042 SN35N_6042 SN35N_6042 34001 34384 + probable transposase for insertion-like sequence element IS1161 identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~probable transposase for insertion-like sequence el ement IS1161 [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3238 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6042 SN35N_6043 SN35N_6043 SN35N_6043 34533 34751 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum IPLA88 gene gene3239 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6043 SN35N_6044 SN35N_6044 SN35N_6044 34751 34927 + uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 2165 gene gene3240 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_6044 SN35N_7001 SN35N_7001 SN35N_7001 109 1263 + Na(+)/H(+) antiporter Na(+)/H(+) antiporter [Lactobacillus brevis KB290]%3B~identified by MetaGeneAnnotator%3B putative%3B~sodium/hydrogen exchanger family%3B pfam00999%3B~transporter%2C monovalent cation:proton antiporter-2 (CPA2) family%3B TIGR00932 gene gene3241 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7001 SN35N_7002 SN35N_7002 eriC eriC 1386 2954 + chloride channel protein Cl- binding residues [ion binding]%3B~Cl- selectivity filter%3B~H+/Cl- coupling transport residue%3B~TrkA-C domain%3B pfam02080%3B~chloride channel protein EriC [inorganic ion transport and metabolism]%3B COG0038%3B~chloride channel protein [Lactobacillus rhamnosus GG]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~pore gating glutamate residue gene gene3242 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7002 SN35N_7003 SN35N_7003 SN35N_7003 3071 4000 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene3243 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7003 SN35N_7004 SN35N_7004 SN35N_7004 4774 6000 + transposase COG3547 transposase and inactivated derivatives%3B~identified by MetaGeneAnnotator%3B putative%3B~transposase IS116/IS110/IS902 family%3B pfam02371%3B~transposase [Lactobacillus amylovorus GRL 1112]%3B~transposase%3B pfam01548 gene gene3244 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7004 SN35N_7005 SN35N_7005 SN35N_7005 6227 6373 - hypothetical protein hypothetical protein zj316_3p37 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3245 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7005 SN35N_7006 SN35N_7006 SN35N_7006 7297 8013 - extracellular protein extracellular protein [Lactobacillus plantarum subsp. plantarum ST- III]%3B~identified by MetaGeneAnnotator%3B putative%3B~lysine motif is a small domain involved in binding peptidoglycan%3B cd00118 gene gene3246 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7006 SN35N_7007 SN35N_7007 SN35N_7007 8396 9361 - transposase InsI for insertion sequence element IS30A helix-turn-helix domain%3B pfam13936%3B~homeodomain-like domain%3B pfam13565%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase InsI for insertion sequence element IS3 0A [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3247 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7007 SN35N_7008 SN35N_7008 proV proV 9778 10974 + glycine/betaine/carnitine ABC transporter%2C ATP-binding subunit ABC transporter signature motif%3B~ABC-type proline/glycine betaine transport system%2C ATPase component [amino acid transport and metabolism]%3B COG4175%3B~ATP binding site [chemical binding]%3B~ATP-binding cassette domain of the osmoprotectant proline/glycine betaine uptake system%3B cd03294%3B~D-loop%3B~H-loop/switch region%3B~Q-loop/lid%3B~glycine/betaine/carnitine ABC transporter%2C ATP-binding subunit [Lactobacillus plantarum subsp. plantarum ST- III]%3B~identified by MetaGeneAnnotator%3B putative%3B~walker A/P-loop%3B~walker B gene gene3248 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7008 SN35N_7009 SN35N_7009 SN35N_7009 10974 11813 + glycine/betaine ABC transporter ABC-ATPase subunit interface%3B~conserved gate region%3B~dimer interface [polypeptide binding]%3B~glycine/betaine ABC transporter [Listeria monocytog enes]%3B~identified by MetaGeneAnnotator%3B putative%3B~putative PBP binding loops gene gene3249 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7009 SN35N_7010 SN35N_7010 proX proX 11860 12738 + glycine/betaine/carnitine ABC transporter%2C substrate-binding lipoprotein precursor identified by MetaGeneAnnotator%3B putative%3B~substrate binding domain of ABC-type glycine betaine transport system%3B pfam04069 gene gene3250 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7010 SN35N_7011 SN35N_7011 SN35N_7011 12984 13949 - transposase COG: COG2826%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase [Lactobacillus reuteri SD2112]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3251 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7011 SN35N_7012 SN35N_7012 SN35N_7012 14099 14788 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene3252 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7012 SN35N_7013 SN35N_7013 SN35N_7013 15067 15366 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Lactobacillus plantarum 16 gene gene3253 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7013 SN35N_7014 SN35N_7014 repB repB 15368 16228 - RepB ATPases involved in chromosome partitioning [cell division and chromosome partitioning]%3B COG1192%3B~P-loop%3B~RepB [Lactobacillus plantarum subsp. plantarum P-8]%3B~identified by MetaGeneAnnotator%3B putative%3B~magnesium ion binding site [ion binding] gene gene3254 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7014 SN35N_7015 SN35N_7015 SN35N_7015 17175 17507 + hypothetical protein hypothetical protein zj316_2p25 [Lactobacillus plan tarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3255 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7015 SN35N_7016 SN35N_7016 SN35N_7016 17957 18253 - transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B- 30929] gene gene3256 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7016 SN35N_7017 SN35N_7017 SN35N_7017 19032 19313 + antitoxin of toxin-antitoxin stability system%2C RelB family RelB antitoxin%3B cl01171%3B~antitoxin of toxin-antitoxin stability system%2C RelB family [Pediococcus claussenii ATCC BAA- 344]%3B~identified by MetaGeneAnnotator%3B putative gene gene3257 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7017 SN35N_7018 SN35N_7018 pemK pemK 19303 19809 + addiction module toxin%2C PemK-like protein ORF17%3B~addiction module toxin%2C PemK-like protein [Oenococc us oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3258 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7018 SN35N_7019 SN35N_7019 SN35N_7019 20446 20655 + transposase identified by MetaGeneAnnotator%3B putative%3B~transposase [Lactobacillus rhamnosus HN001] gene gene3259 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7019 SN35N_7020 SN35N_7020 mntH mntH 20719 20967 + manganese transport protein identified by MetaGeneAnnotator%3B putative%3B~mntH gene product [Lactobacillus casei BD- II] gene gene3260 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7020 SN35N_7021 SN35N_7021 SN35N_7021 21124 22032 + magnesium and cobalt transport protein corA COG: Mg2+ and Co2+ transporters%3B~Cl binding site [ion binding]%3B~CorA-like Mg2+ transporter protein%3B pfam01544%3B~identified by MetaGeneAnnotator%3B putative%3B~magnesium and cobalt transport protein corA [Lactobacillus rhamnosus HN001]%3B~oligomer interface [polypeptide binding]%3B~uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family%3B cd12827 gene gene3261 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7021 SN35N_7022 SN35N_7022 SN35N_7022 23124 23420 + transposase identified by MetaGeneAnnotator%3B putative%3B~manually curated%3B KEGG: lhe:lhv_1988 putative transposase%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus buchneri NRRL B- 30929] gene gene3262 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7022 SN35N_7023 SN35N_7023 SN35N_7023 24083 24361 - hypothetical protein ORF18%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative%3B~protein of unknown function (DUF3847)%3B pfam12958 gene gene3263 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7023 SN35N_7024 SN35N_7024 SN35N_7024 24384 24626 - hypothetical protein ORF19%3B~hypothetical protein [Oenococcus oeni]%3B~identified by MetaGeneAnnotator%3B putative gene gene3264 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7024 SN35N_7025 SN35N_7025 SN35N_7025 24880 26928 + conjugal transfer protein traA MobA/MobL family%3B pfam03389%3B~conjugal transfer protein traA [Lactobacillus brevis KB290]%3B~identified by MetaGeneAnnotator%3B putative gene gene3265 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7025 SN35N_7026 SN35N_7026 SN35N_7026 27025 29160 + DNA topoisomerase C-terminal repeat of topoisomerase%3B pfam13342%3B~DNA binding groove [nucleotide binding]%3B~DNA topoisomerase III%3B provisional%3B~DNA topoisomerase [Lactobacillus plantarum 16]%3B~catalytic site [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~nucleotide binding site [chemical binding]%3B~phosphate binding site [ion binding]%3B~putative interdomain interaction site [polypeptide binding]%3B~putative metal-binding site [ion binding]%3B~putative nucleotide binding site [chemical binding] gene gene3266 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7026 SN35N_7027 SN35N_7027 SN35N_7027 29283 29498 + hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene3267 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7027 SN35N_7028 SN35N_7028 SN35N_7028 29502 30626 + uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 domain of unknown function (DUF955)%3B cl01076%3B~identified by MetaGeneAnnotator%3B putative%3B~uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 [Lactobacillus brevis KB290] gene gene3268 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7028 SN35N_7029 SN35N_7029 SN35N_7029 30650 31036 - hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene3269 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7029 SN35N_7030 SN35N_7030 SN35N_7030 31029 31349 - hypothetical protein identified by MetaGeneAnnotator%3B putative%3B~unnamed protein product [Lactobacillus helveticus H10] gene gene3270 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7030 SN35N_7031 SN35N_7031 uvrX uvrX 31342 32643 - possible DNA-directed DNA polymerase identified by MetaGeneAnnotator%3B putative%3B~uvrX gene product [Lactobacillus helveticus H10] gene gene3271 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7031 SN35N_7032 SN35N_7032 hsdS2 hsdS2 33168 33533 - type I restriction-modification system%2C specificity subunit identified by MetaGeneAnnotator%3B putative%3B~restriction endonuclease S subunits [defense mechanisms]%3B COG0732%3B~type I restriction-modification system%2C specificity subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gene gene3272 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7032 SN35N_7033 SN35N_7033 SN35N_7033 33568 34497 - transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene3273 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7033 SN35N_7034 SN35N_7034 aspD aspD 34661 36256 + L-aspartate-beta-decarboxylase L-aspartate-beta-decarboxylase [Tetragenococcus halophilus NBRC 12172]%3B~aspartate 4-decarboxylase%3B TIGR03801%3B~catalytic residue [active]%3B~homodimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~pyridoxal 5'-phosphate binding site [chemical binding]%3B~the N-terminus of this ORF was identified by Edman sequencing. gene gene3274 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7034 SN35N_7035 SN35N_7035 aspT aspT 36270 37928 + aspartate/alanine antiporter TrkA-C domain%3B pfam02080%3B~aspartate-alanine antiporter%3B TIGR03802%3B~aspartate/alanine antiporter [Tetragenococcus halophilus NBRC 12172]%3B~identified by MetaGeneAnnotator%3B putative%3B~predicted permease membrane region%3B pfam06826 gene gene3275 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7035 SN35N_7036 SN35N_7036 SN35N_7036 38018 38227 - uncharacterized protein identified by MetaGeneAnnotator%3B putative%3B~organism:Enterococcus durans ATCC 6056 gene gene3276 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7036 SN35N_7037 SN35N_7037 SN35N_7037 38313 38993 - IS1216 transposase IS1216 transposase [Enterococcus faecalis V583]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B cl01316%3B~similar to GP:2467239%3B identified by sequence similarity%3B putative%3B~transposase and inactivated derivatives [DNA replication%2C recombination%2C and repair] gene gene3277 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7037 SN35N_7038 SN35N_7038 SN35N_7038 39055 39366 + uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 identified by MetaGeneAnnotator%3B putative%3B~uncharacterized protein pXO2-81/BXB0111/GBAA_pXO2_0111 [Lactobacillus brevis KB290] gene gene3278 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7038 SN35N_7039 SN35N_7039 SN35N_7039 39632 39850 - transposase OrfB [Lactobacillus plantarum subsp. plantarum P-8 ]%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam13333%3B~putative transposase OrfB%3B reviewed gene gene3279 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7039 SN35N_7040 SN35N_7040 SN35N_7040 39938 40264 + transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340%3B~transposase [Lactobacillus rhamnosus HN001] gene gene3280 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7040 SN35N_7041 SN35N_7041 SN35N_7041 40309 40575 + multidrug efflux pump protein identified by MetaGeneAnnotator%3B putative%3B~multidrug efflux pump protein [Lactobacillus plantarum subsp. plantarum P-8] gene gene3281 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7041 SN35N_7042 SN35N_7042 SN35N_7042 40650 42917 - cation transport ATPase E1-E2 ATPase%3B pfam00122%3B~cation transport ATPase [Lactobacillus casei ATCC 334]%3B~copper-(or silver)-translocating P-type ATPase%3B TIGR01511%3B~haloacid dehalogenase-like hydrolases%3B cl11391%3B~identified by MetaGeneAnnotator%3B putative gene gene3282 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7042 SN35N_7043 SN35N_7043 SN35N_7043 43168 43599 - transcriptional regulator copper transport repressor%2C CopY/TcrY family%3B TIGR02698%3B~helix-turn-helix domains%3B cl00088%3B~identified by MetaGeneAnnotator%3B putative%3B~transcriptional regulator [Lactobacillus casei ATCC 334] gene gene3283 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7043 SN35N_7044 SN35N_7044 res res 44185 44796 + resolvase DNA binding site [nucleotide binding]%3B~DNA-binding interface [nucleotide binding]%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic site I dimer interface [polypeptide binding]%3B~resolvase [Enterococcus faecalis]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic antiparallel dimer interface [polypeptide binding]%3B~synaptic flat tetramer interface [polypeptide binding]%3B~synaptic site I dimer interface [polypeptide binding] gene gene3284 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7044 SN35N_7045 SN35N_7045 kup kup 44896 46932 + potassium uptake protein K+ potassium transporter%3B pfam02705%3B~identified by MetaGeneAnnotator%3B putative%3B~potassium uptake protein [Lactobacillus plantarum subsp. plantarum ST- III] gene gene3285 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7045 SN35N_7046 SN35N_7046 SN35N_7046 47315 47752 + transcription regulator MarR family%3B pfam01047%3B~identified by MetaGeneAnnotator%3B putative%3B~transcription regulator [Lactobacillus plantarum subsp. plantarum ST-III]%3B~transcriptional regulators [transcription]%3B COG1846 gene gene3286 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7046 SN35N_7047 SN35N_7047 SN35N_7047 48130 48684 + DNA invertase DNA binding site [nucleotide binding]%3B~DNA invertase [Tetragenococcus halophilus]%3B~DNA-binding interface [nucleotide binding]%3B~ORF23%3B similar to DNA invertase gene of pediococcal plasmid pMD136%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic site I dimer interface [polypeptide binding]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic antiparallel dimer interface [polypeptide binding]%3B~synaptic flat tetramer interface [polypeptide binding]%3B~synaptic site I dimer interface [polypeptide binding] gene gene3287 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7047 SN35N_7048 SN35N_7048 SN35N_7048 49230 49661 - transposase identified by MetaGeneAnnotator%3B putative%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene3288 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7048 SN35N_7049 SN35N_7049 SN35N_7049 49634 50005 - putative transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene3289 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7049 SN35N_7050 SN35N_7050 SN35N_7050 50118 50273 + HD domain protein HD domain protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative gene gene3290 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7050 SN35N_7051 SN35N_7051 SN35N_7051 50378 50737 + HD domain protein HD domain protein [Lactobacillus buchneri CD034]%3B~identified by MetaGeneAnnotator%3B putative%3B~metal dependent phosphohydrolases with conserved 'HD' motif%3B cd00077%3B~predicted HD superfamily hydrolase [General function prediction only] gene gene3291 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7051 SN35N_7052 SN35N_7052 SN35N_7052 51526 51963 + NrdI family protein NrdI Flavodoxin like%3B cl17293%3B~NrdI family protein [Lactobacillus plantarum subsp. plantarum ST- III]%3B~identified by MetaGeneAnnotator%3B putative gene gene3292 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7052 SN35N_7053 SN35N_7053 SN35N_7053 51970 54138 + ribonucleoside-diphosphate reductase R2 peptide binding site%3B~catalytic residues [active]%3B~class I ribonucleotide reductase%3B cd01679%3B~dimer interface [polypeptide binding]%3B~effector binding site%3B~identified by MetaGeneAnnotator%3B putative%3B~ribonucleoside-diphosphate reductase [Lactobacillus plantarum ZJ316]%3B~ribonucleotide reductase N-terminal%3B pfam08343%3B~ribonucleotide-diphosphate reductase subunit alpha%3B validated gene gene3293 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7053 SN35N_7054 SN35N_7054 SN35N_7054 54245 55171 + ribonucleoside-diphosphate reductase beta subunit dinuclear metal binding motif [ion binding]%3B~ferritin-like superfamily of diiron-containing four-helix-bundle proteins%3B cl00264%3B~identified by MetaGeneAnnotator%3B putative%3B~ribonucleoside-diphosphate reductase beta subunit [ Lactobacillus plantarum ZJ316]%3B~ribonucleotide-diphosphate reductase subunit beta%3B provisional%3B PRK13966 gene gene3294 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7054 SN35N_7055 SN35N_7055 SN35N_7055 55186 56136 + ribonucleoside-diphosphate reductase beta subunit diiron center [ion binding]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~putative radical transfer pathway%3B~ribonucleoside-diphosphate reductase beta subunit [ Lactobacillus plantarum ZJ316]%3B~ribonucleotide Reductase%2C R2/beta subunit%2C ferritin-like diiron-binding domain%3B cd01049%3B~ribonucleotide-diphosphate reductase subunit beta%3B provisional%3B PRK13966%3B~tyrosyl radical gene gene3295 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7055 SN35N_7056 SN35N_7056 SN35N_7056 56264 57076 - integrase identified by MetaGeneAnnotator%3B putative%3B~integrase [Lactobacillus plantarum ZJ316]%3B~integrase core domain%3B cl15866%3B~integrase core domain%3B pfam00665 gene gene3296 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7056 SN35N_7057 SN35N_7057 res res 57190 57822 + DNA integration/recombination/inversion protein DNA binding site [nucleotide binding]%3B~DNA integration/recombination/inversion protein [Lactobacillus plantarum ZJ316]%3B~catalytic nucleophile [active]%3B~catalytic residues [active]%3B~identified by MetaGeneAnnotator%3B putative%3B~presynaptic site I dimer interface [polypeptide binding]%3B~site-specific recombinases%2C DNA invertase Pin homologs [DNA replication%2C recombination%2C and repair]%3B COG1961%3B~synaptic antiparallel dimer interface [polypeptide binding]%3B~synaptic flat tetramer interface [polypeptide binding]%3B~synaptic site I dimer interface [polypeptide binding] gene gene3297 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7057 SN35N_7058 SN35N_7058 SN35N_7058 58005 58934 + transposase%2C IS30 family helix-turn-helix domain%3B pfam13936%3B~identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826%3B~transposase%2C IS30 family [Lactobacillus plantarum subsp. plantarum P-8] gene gene3298 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7058 SN35N_7059 SN35N_7059 SN35N_7059 58956 59858 + YitT family protein YitT family protein [Lactobacillus plantarum ZJ316]%3B~identified by MetaGeneAnnotator%3B putative%3B~uncharacterized BCR%2C YitT family COG1284%3B pfam02588%3B~uncharacterized conserved protein [function unknown]%3B~uncharacterized protein conserved in bacteria (DUF2179)%3B pfam10035 gene gene3299 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7059 SN35N_7060 SN35N_7060 SN35N_7060 59966 60337 + putative transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene3300 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7060 SN35N_7061 SN35N_7061 SN35N_7061 60310 60741 + transposase identified by MetaGeneAnnotator%3B putative%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene3301 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7061 SN35N_7062 SN35N_7062 SN35N_7062 61112 62266 + Na(+)/H(+) antiporter Na(+)/H(+) antiporter [Lactobacillus brevis KB290]%3B~identified by MetaGeneAnnotator%3B putative%3B~sodium/hydrogen exchanger family%3B pfam00999%3B~transporter%2C monovalent cation:proton antiporter-2 (CPA2) family%3B TIGR00932 gene gene3302 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7062 SN35N_7063 SN35N_7063 eriC eriC 62389 63957 + chloride channel protein Cl- binding residues [ion binding]%3B~Cl- selectivity filter%3B~H+/Cl- coupling transport residue%3B~TrkA-C domain%3B pfam02080%3B~chloride channel protein EriC [inorganic ion transport and metabolism]%3B COG0038%3B~chloride channel protein [Lactobacillus rhamnosus GG]%3B~dimer interface [polypeptide binding]%3B~identified by MetaGeneAnnotator%3B putative%3B~pore gating glutamate residue gene gene3303 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7063 SN35N_7064 SN35N_7064 SN35N_7064 64074 64667 - probable transposase for insertion-like sequence element IS1161 identified by MetaGeneAnnotator%3B putative%3B~integrase core domain%3B pfam00665%3B~probable transposase for insertion-like sequence element IS1161 [Lactobacillus brevis KB290]%3B~transposase and inactivated derivatives%2C IS30 family [DNA replication%2C recombination%2C and repair]%3B COG2826 gene gene3304 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7064 SN35N_7065 SN35N_7065 SN35N_7065 64738 65073 + putative transposase identified by MetaGeneAnnotator%3B putative%3B~putative transposase [Lactobacillus plantarum subsp. plantarum P-8]%3B~putative transposase of IS4/5 family (DUF4096)%3B pfam13340 gene gene3305 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7065 SN35N_7066 SN35N_7066 SN35N_7066 65046 65477 + transposase identified by MetaGeneAnnotator%3B putative%3B~transposase DDE domain%3B pfam01609%3B~transposase DDE domain%3B pfam13586%3B~transposase [Lactobacillus plantarum ZJ316] gene gene3306 http://www.ncbi.nlm.nih.gov/gene/?term=SN35N_7066