llmg_0001 SM00382 ATPases associated with a variety of cellular activities llmg_0001 SM00760 Bacterial dnaA protein helix-turn-helix domain llmg_0002 SM00480 DNA polymerase III beta subunit llmg_0006 SM00530 Helix-turn-helix XRE-family like proteins llmg_0008 SM00530 Helix-turn-helix XRE-family like proteins llmg_0013 SM00487 DEAD-like helicases superfamily llmg_0013 SM00490 helicase superfamily c-terminal domain llmg_0013 SM00982 llmg_0013 llmg_0013 SM01058 CarD-like/TRCF domain llmg_0015 SM00363 S4 RNA-binding domain llmg_0019 SM00977 TilS substrate C-terminal domain llmg_0021 SM00382 ATPases associated with a variety of cellular activities llmg_0030 SM00885 D5 N terminal like llmg_0031 SM00942 Primase C terminal 1 (PriCT-1) llmg_0031 SM00943 Bifunctional DNA primase/polymerase, N-terminal llmg_0038 SM00530 Helix-turn-helix XRE-family like proteins llmg_0041 SM00530 Helix-turn-helix XRE-family like proteins llmg_0050 SM00382 ATPases associated with a variety of cellular activities llmg_0073 SM00861 Transketolase, pyrimidine binding domain llmg_0077 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_0085 SM00382 ATPases associated with a variety of cellular activities llmg_0097 SM00903 Flavin reductase like domain llmg_0102 SM00470 ParB-like nuclease domain llmg_0103 SM00382 ATPases associated with a variety of cellular activities llmg_0106 SM00382 ATPases associated with a variety of cellular activities llmg_0113 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_0113 SM00954 Region found in RelA / SpoT proteins llmg_0119 SM00563 Phosphate acyltransferases llmg_0120 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_0124 SM00957 SecA DEAD-like domain llmg_0124 SM00958 SecA preprotein cross-linking domain llmg_0144 SM00393 Putative single-stranded nucleic acids-binding domain llmg_0144 SM01245 llmg_0144 llmg_0151 SM00732 Likely ribonuclease with RNase H fold. llmg_0158 SM00642 Alpha-amylase domain llmg_0167 SM00881 CoA binding domain llmg_0168 SM00892 DNA/RNA non-specific endonuclease llmg_0176 SM00845 GatB domain llmg_0180 SM00357 Cold shock protein domain llmg_0200 SM00899 llmg_0200 llmg_0202 SM01120 llmg_0202 llmg_0202 SM01121 llmg_0202 llmg_0214 SM00382 ATPases associated with a variety of cellular activities llmg_0229 SM00641 Glycosyl hydrolases family 25 llmg_0230 SM00116 Domain in cystathionine beta-synthase and other proteins. llmg_0230 SM01240 llmg_0230 llmg_0235 SM01103 llmg_0235 llmg_0237 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_0244 SM00986 Uracil DNA glycosylase superfamily llmg_0244 SM00987 UreE urease accessory protein, C-terminal domain llmg_0245 SM00829 Enoylreductase llmg_0250 SM00422 helix_turn_helix, mercury resistance llmg_0257 SM01120 llmg_0257 llmg_0268 SM00382 ATPases associated with a variety of cellular activities llmg_0269 SM00382 ATPases associated with a variety of cellular activities llmg_0280 SM00047 Lysozyme subfamily 2 llmg_0280 SM00257 Lysin motif llmg_0287 SM00382 ATPases associated with a variety of cellular activities llmg_0288 SM00382 ATPases associated with a variety of cellular activities llmg_0296 SM00363 S4 RNA-binding domain llmg_0296 SM01390 llmg_0296 llmg_0297 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_0297 SM00732 Likely ribonuclease with RNase H fold. llmg_0298 SM00731 SprT homologues. llmg_0301 SM00422 helix_turn_helix, mercury resistance llmg_0302 SM00849 Metallo-beta-lactamase superfamily llmg_0313 SM00382 ATPases associated with a variety of cellular activities llmg_0321 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_0324 SM00382 ATPases associated with a variety of cellular activities llmg_0325 SM00382 ATPases associated with a variety of cellular activities llmg_0329 SM00382 ATPases associated with a variety of cellular activities llmg_0341 SM00382 ATPases associated with a variety of cellular activities llmg_0341 SM00930 llmg_0341 llmg_0344 SM00382 ATPases associated with a variety of cellular activities llmg_0346 SM00382 ATPases associated with a variety of cellular activities llmg_0355 SM00855 Phosphoglycerate mutase family llmg_0359 SM00493 llmg_0359 llmg_0366 SM00382 ATPases associated with a variety of cellular activities llmg_0367 SM00382 ATPases associated with a variety of cellular activities llmg_0369 SM00487 DEAD-like helicases superfamily llmg_0369 SM00490 helicase superfamily c-terminal domain llmg_0373 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain llmg_0373 SM01232 llmg_0373 llmg_0374 SM00382 ATPases associated with a variety of cellular activities llmg_0380 SM01118 llmg_0380 llmg_0382 SM00954 Region found in RelA / SpoT proteins llmg_0395 SM00981 llmg_0395 llmg_0401 SM00363 S4 RNA-binding domain llmg_0410 SM00883 Chaperonin 10 Kd subunit llmg_0412 SM00849 Metallo-beta-lactamase superfamily llmg_0413 SM00091 PAS domain llmg_0413 SM00387 Histidine kinase-like ATPases llmg_0413 SM00388 His Kinase A (phosphoacceptor) domain llmg_0414 SM00448 cheY-homologous receiver domain llmg_0414 SM00862 Transcriptional regulatory protein, C terminal llmg_0423 SM00382 ATPases associated with a variety of cellular activities llmg_0424 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_0433 SM00487 DEAD-like helicases superfamily llmg_0433 SM00490 helicase superfamily c-terminal domain llmg_0444 SM00292 breast cancer carboxy-terminal domain llmg_0444 SM00532 Ligase N family llmg_0445 SM00046 Diacylglycerol kinase catalytic domain (presumed) llmg_0446 SM00382 ATPases associated with a variety of cellular activities llmg_0447 SM00890 Domain of unknown function llmg_0452 SM00345 helix_turn_helix gluconate operon transcriptional repressor llmg_0452 SM00866 llmg_0452 llmg_0483 SM00481 DNA polymerase alpha chain like domain llmg_0484 SM00354 helix_turn _helix lactose operon repressor llmg_0496 SM00411 bacterial (prokaryotic) histone like domain llmg_0499 SM00342 helix_turn_helix, arabinose operon control protein llmg_0501 SM00382 ATPases associated with a variety of cellular activities llmg_0503 SM00850 LytTr DNA-binding domain llmg_0509 SM00047 Lysozyme subfamily 2 llmg_0509 SM00257 Lysin motif llmg_0510 SM00849 Metallo-beta-lactamase superfamily llmg_0520 SM00400 zinc finger llmg_0520 SM00493 llmg_0520 llmg_0528 SM00382 ATPases associated with a variety of cellular activities llmg_0528 SM01086 C-terminal, D2-small domain, of ClpB protein llmg_0530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain llmg_0534 SM00487 DEAD-like helicases superfamily llmg_0534 SM00490 helicase superfamily c-terminal domain llmg_0535 SM00062 Bacterial periplasmic substrate-binding proteins llmg_0557 SM00937 llmg_0557 llmg_0570 SM00967 RNA 2'-O ribose methyltransferase substrate binding llmg_0572 SM00422 helix_turn_helix, mercury resistance llmg_0586 SM01350 llmg_0586 llmg_0593 SM00244 prohibitin homologues llmg_0603 SM00530 Helix-turn-helix XRE-family like proteins llmg_0615 SM00382 ATPases associated with a variety of cellular activities llmg_0615 SM01086 C-terminal, D2-small domain, of ClpB protein llmg_0617 SM01192 llmg_0617 llmg_0617 SM01193 llmg_0617 llmg_0624 SM00382 ATPases associated with a variety of cellular activities llmg_0634 SM00878 Biotin carboxylase C-terminal domain llmg_0637 SM01329 llmg_0637 llmg_0643 SM00831 Cation transporter/ATPase, N-terminus llmg_0658 SM00487 DEAD-like helicases superfamily llmg_0681 SM00530 Helix-turn-helix XRE-family like proteins llmg_0683 SM00382 ATPases associated with a variety of cellular activities llmg_0694 SM00100 Cyclic nucleotide-monophosphate binding domain llmg_0694 SM00419 helix_turn_helix, cAMP Regulatory protein llmg_0697 SM00382 ATPases associated with a variety of cellular activities llmg_0698 SM00382 ATPases associated with a variety of cellular activities llmg_0711 SM00857 Resolvase, N terminal domain llmg_0731 SM00257 Lysin motif llmg_0740 SM00642 Alpha-amylase domain llmg_0741 SM00642 Alpha-amylase domain llmg_0742 SM01266 llmg_0742 llmg_0743 SM00642 Alpha-amylase domain llmg_0744 SM00642 Alpha-amylase domain llmg_0746 SM00354 helix_turn _helix lactose operon repressor llmg_0747 SM00448 cheY-homologous receiver domain llmg_0747 SM00862 Transcriptional regulatory protein, C terminal llmg_0748 SM00387 Histidine kinase-like ATPases llmg_0748 SM00388 His Kinase A (phosphoacceptor) domain llmg_0749 SM00861 Transketolase, pyrimidine binding domain llmg_0750 SM01234 llmg_0750 llmg_0754 SM00530 Helix-turn-helix XRE-family like proteins llmg_0760 SM01095 Cpl-7 lysozyme C-terminal domain llmg_0766 SM00382 ATPases associated with a variety of cellular activities llmg_0766 SM00843 llmg_0766 llmg_0771 SM00981 llmg_0771 llmg_0775 SM00354 helix_turn _helix lactose operon repressor llmg_0778 SM00463 Small MutS-related domain llmg_0778 SM00533 DNA-binding domain of DNA mismatch repair MUTS family llmg_0778 SM00534 ATPase domain of DNA mismatch repair MUTS family llmg_0783 SM00998 Adenylosuccinate lyase C-terminus llmg_0784 SM00354 helix_turn _helix lactose operon repressor llmg_0787 SM00382 ATPases associated with a variety of cellular activities llmg_0793 SM00530 Helix-turn-helix XRE-family like proteins llmg_0808 SM00382 ATPases associated with a variety of cellular activities llmg_0823 SM00382 ATPases associated with a variety of cellular activities llmg_0836 SM00635 Bacterial Ig-like domain 2 llmg_0851 SM00257 Lysin motif llmg_0851 SM00641 Glycosyl hydrolases family 25 llmg_0857 SM00345 helix_turn_helix gluconate operon transcriptional repressor llmg_0857 SM00895 llmg_0857 llmg_0868 SM00861 Transketolase, pyrimidine binding domain llmg_0871 SM00859 Semialdehyde dehydrogenase, NAD binding domain llmg_0874 SM01130 llmg_0874 llmg_0876 SM00849 Metallo-beta-lactamase superfamily llmg_0878 SM00382 ATPases associated with a variety of cellular activities llmg_0878 SM00962 SRP54-type protein, GTPase domain llmg_0878 SM00963 SRP54-type protein, helical bundle domain llmg_0888 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor llmg_0894 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain llmg_0902 SM00226 Low molecular weight phosphatase family llmg_0908 SM00448 cheY-homologous receiver domain llmg_0908 SM00862 Transcriptional regulatory protein, C terminal llmg_0909 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain llmg_0909 SM00387 Histidine kinase-like ATPases llmg_0909 SM00388 His Kinase A (phosphoacceptor) domain llmg_0911 SM00938 Nitrogen regulatory protein P-II llmg_0925 SM00530 Helix-turn-helix XRE-family like proteins llmg_0948 SM00382 ATPases associated with a variety of cellular activities llmg_0955 SM00829 Enoylreductase llmg_0956 SM00354 helix_turn _helix lactose operon repressor llmg_0962 SM00342 helix_turn_helix, arabinose operon control protein llmg_0966 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_0968 SM00822 llmg_0968 llmg_0975 SM01211 llmg_0975 llmg_0986 SM00382 ATPases associated with a variety of cellular activities llmg_0986 SM01086 C-terminal, D2-small domain, of ClpB protein llmg_0989 SM00382 ATPases associated with a variety of cellular activities llmg_0994 SM00798 AICARFT/IMPCHase bienzyme llmg_0994 SM00851 MGS-like domain llmg_0997 SM01209 llmg_0997 llmg_0997 SM01210 llmg_0997 llmg_0999 SM01001 AIR carboxylase llmg_1001 SM00342 helix_turn_helix, arabinose operon control protein llmg_1017 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1020 SM00422 helix_turn_helix, mercury resistance llmg_1027 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1027 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor llmg_1047 SM00345 helix_turn_helix gluconate operon transcriptional repressor llmg_1048 SM00382 ATPases associated with a variety of cellular activities llmg_1054 SM00470 ParB-like nuclease domain llmg_1055 SM00530 Helix-turn-helix XRE-family like proteins llmg_1060 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain llmg_1062 SM01133 llmg_1062 llmg_1065 SM00345 helix_turn_helix gluconate operon transcriptional repressor llmg_1065 SM00866 llmg_1065 llmg_1067 SM00387 Histidine kinase-like ATPases llmg_1067 SM00388 His Kinase A (phosphoacceptor) domain llmg_1068 SM00448 cheY-homologous receiver domain llmg_1068 SM00862 Transcriptional regulatory protein, C terminal llmg_1074 SM00382 ATPases associated with a variety of cellular activities llmg_1086 SM00831 Cation transporter/ATPase, N-terminus llmg_1087 SM00047 Lysozyme subfamily 2 llmg_1089 SM00851 MGS-like domain llmg_1089 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain llmg_1089 SM01209 llmg_1089 llmg_1107 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family llmg_1123 SM00382 ATPases associated with a variety of cellular activities llmg_1136 SM00382 ATPases associated with a variety of cellular activities llmg_1141 SM00530 Helix-turn-helix XRE-family like proteins llmg_1143 SM00530 Helix-turn-helix XRE-family like proteins llmg_1151 SM00345 helix_turn_helix gluconate operon transcriptional repressor llmg_1172 SM00420 helix_turn_helix, Deoxyribose operon repressor llmg_1172 SM01134 llmg_1172 llmg_1177 SM00530 Helix-turn-helix XRE-family like proteins llmg_1182 SM01266 llmg_1182 llmg_1190 SM00116 Domain in cystathionine beta-synthase and other proteins. llmg_1194 SM00363 S4 RNA-binding domain llmg_1202 SM00382 ATPases associated with a variety of cellular activities llmg_1203 SM00382 ATPases associated with a variety of cellular activities llmg_1204 SM00530 Helix-turn-helix XRE-family like proteins llmg_1209 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1223 SM00831 Cation transporter/ATPase, N-terminus llmg_1224 SM00529 Helix-turn-helix diphteria tox regulatory element llmg_1235 SM00100 Cyclic nucleotide-monophosphate binding domain llmg_1237 SM01002 Alanine dehydrogenase/PNT, C-terminal domain llmg_1237 SM01003 Alanine dehydrogenase/PNT, N-terminal domain llmg_1238 SM00357 Cold shock protein domain llmg_1246 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor llmg_1248 SM00382 ATPases associated with a variety of cellular activities llmg_1249 SM00450 Rhodanese Homology Domain llmg_1252 SM00422 helix_turn_helix, mercury resistance llmg_1255 SM00357 Cold shock protein domain llmg_1256 SM00357 Cold shock protein domain llmg_1261 SM00382 ATPases associated with a variety of cellular activities llmg_1272 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain llmg_1272 SM00437 Bacterial DNA topoisomerase I DNA-binding domain llmg_1272 SM00493 llmg_1272 llmg_1281 SM00382 ATPases associated with a variety of cellular activities llmg_1287 SM00450 Rhodanese Homology Domain llmg_1288 SM00481 DNA polymerase alpha chain like domain llmg_1301 SM01120 llmg_1301 llmg_1301 SM01121 llmg_1301 llmg_1304 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_1304 SM00357 Cold shock protein domain llmg_1304 SM00955 llmg_1304 llmg_1305 SM00530 Helix-turn-helix XRE-family like proteins llmg_1310 SM00028 Tetratricopeptide repeats llmg_1324 SM00342 helix_turn_helix, arabinose operon control protein llmg_1328 SM00382 ATPases associated with a variety of cellular activities llmg_1338 SM00905 Dihydroneopterin aldolase llmg_1340 SM00382 ATPases associated with a variety of cellular activities llmg_1340 SM00994 ClpX C4-type zinc finger llmg_1340 SM01086 C-terminal, D2-small domain, of ClpB protein llmg_1347 SM00530 Helix-turn-helix XRE-family like proteins llmg_1359 SM00530 Helix-turn-helix XRE-family like proteins llmg_1400 SM00271 DnaJ molecular chaperone homology domain llmg_1412 SM01240 llmg_1412 llmg_1418 SM00729 Elongator protein 3, MiaB family, Radical SAM llmg_1419 SM00470 ParB-like nuclease domain llmg_1430 SM00904 Riboflavin kinase llmg_1451 SM00434 DNA Topoisomerase IV llmg_1456 SM01217 llmg_1456 llmg_1457 SM00382 ATPases associated with a variety of cellular activities llmg_1460 SM00382 ATPases associated with a variety of cellular activities llmg_1463 SM00838 Elongation factor G C-terminus llmg_1468 SM00382 ATPases associated with a variety of cellular activities llmg_1483 SM00487 DEAD-like helicases superfamily llmg_1483 SM00490 helicase superfamily c-terminal domain llmg_1496 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_1501 SM00478 endonuclease III llmg_1501 SM00525 llmg_1501 llmg_1507 SM00671 Sel1-like repeats. llmg_1512 SM00382 ATPases associated with a variety of cellular activities llmg_1514 SM00881 CoA binding domain llmg_1517 SM00014 Acid phosphatase homologues llmg_1518 SM00387 Histidine kinase-like ATPases llmg_1518 SM00388 His Kinase A (phosphoacceptor) domain llmg_1520 SM00448 cheY-homologous receiver domain llmg_1520 SM00862 Transcriptional regulatory protein, C terminal llmg_1524 SM00363 S4 RNA-binding domain llmg_1534 SM00434 DNA Topoisomerase IV llmg_1537 SM00479 llmg_1537 llmg_1539 SM00387 Histidine kinase-like ATPases llmg_1539 SM00433 TopoisomeraseII llmg_1540 SM01207 llmg_1540 llmg_1546 SM00382 ATPases associated with a variety of cellular activities llmg_1547 SM00937 llmg_1547 llmg_1553 SM00382 ATPases associated with a variety of cellular activities llmg_1558 SM00155 Phospholipase D. Active site motifs. llmg_1559 SM00100 Cyclic nucleotide-monophosphate binding domain llmg_1559 SM00419 helix_turn_helix, cAMP Regulatory protein llmg_1570 SM00420 helix_turn_helix, Deoxyribose operon repressor llmg_1570 SM01134 llmg_1570 llmg_1579 SM00855 Phosphoglycerate mutase family llmg_1586 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_1586 SM00955 llmg_1586 llmg_1590 SM00382 ATPases associated with a variety of cellular activities llmg_1593 SM00062 Bacterial periplasmic substrate-binding proteins llmg_1597 SM01022 llmg_1597 llmg_1612 SM00382 ATPases associated with a variety of cellular activities llmg_1616 SM00984 UDP binding domain llmg_1623 SM00257 Lysin motif llmg_1623 SM00382 ATPases associated with a variety of cellular activities llmg_1627 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1631 SM00387 Histidine kinase-like ATPases llmg_1631 SM00433 TopoisomeraseII llmg_1635 SM00382 ATPases associated with a variety of cellular activities llmg_1638 SM00919 Malic enzyme, NAD binding domain llmg_1638 SM01274 llmg_1638 llmg_1639 SM00382 ATPases associated with a variety of cellular activities llmg_1642 SM00829 Enoylreductase llmg_1645 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_1648 SM00421 helix_turn_helix, Lux Regulon llmg_1648 SM00448 cheY-homologous receiver domain llmg_1649 SM00387 Histidine kinase-like ATPases llmg_1661 SM00411 bacterial (prokaryotic) histone like domain llmg_1672 SM00954 Region found in RelA / SpoT proteins llmg_1675 SM00382 ATPases associated with a variety of cellular activities llmg_1679 SM00740 llmg_1679 llmg_1700 SM00382 ATPases associated with a variety of cellular activities llmg_1704 SM01005 Alanine racemase, C-terminal domain llmg_1717 SM00478 endonuclease III llmg_1717 SM00525 llmg_1717 llmg_1718 SM00465 GIY-YIG type nucleases (URI domain) llmg_1724 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_1743 SM01400 llmg_1743 llmg_1744 SM00382 ATPases associated with a variety of cellular activities llmg_1744 SM00962 SRP54-type protein, GTPase domain llmg_1744 SM00963 SRP54-type protein, helical bundle domain llmg_1752 SM00968 SMC proteins Flexible Hinge Domain llmg_1753 SM00358 Double-stranded RNA binding motif llmg_1753 SM00535 Ribonuclease III family llmg_1758 SM00859 Semialdehyde dehydrogenase, NAD binding domain llmg_1767 SM01134 llmg_1767 llmg_1770 SM00450 Rhodanese Homology Domain llmg_1771 SM00450 Rhodanese Homology Domain llmg_1772 SM00450 Rhodanese Homology Domain llmg_1779 SM00878 Biotin carboxylase C-terminal domain llmg_1783 SM00825 Beta-ketoacyl synthase llmg_1784 SM00822 llmg_1784 llmg_1785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. llmg_1788 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1796 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_1804 SM00530 Helix-turn-helix XRE-family like proteins llmg_1818 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1823 SM00870 llmg_1823 llmg_1826 SM00116 Domain in cystathionine beta-synthase and other proteins. llmg_1833 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain llmg_1835 SM00354 helix_turn _helix lactose operon repressor llmg_1845 SM00849 Metallo-beta-lactamase superfamily llmg_1846 SM00357 Cold shock protein domain llmg_1847 SM00357 Cold shock protein domain llmg_1850 SM00829 Enoylreductase llmg_1853 SM00382 ATPases associated with a variety of cellular activities llmg_1856 SM00382 ATPases associated with a variety of cellular activities llmg_1860 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_1860 SM00529 Helix-turn-helix diphteria tox regulatory element llmg_1861 SM00382 ATPases associated with a variety of cellular activities llmg_1862 SM00382 ATPases associated with a variety of cellular activities llmg_1868 SM00530 Helix-turn-helix XRE-family like proteins llmg_1869 SM00642 Alpha-amylase domain llmg_1880 SM00841 Elongation factor P, C-terminal llmg_1880 SM01185 llmg_1880 llmg_1882 SM00650 Ribosomal RNA adenine dimethylases llmg_1883 SM00493 llmg_1883 llmg_1894 SM00855 Phosphoglycerate mutase family llmg_1896 SM00382 ATPases associated with a variety of cellular activities llmg_1897 SM00382 ATPases associated with a variety of cellular activities llmg_1906 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain llmg_1919 SM00046 Diacylglycerol kinase catalytic domain (presumed) llmg_1920 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_1922 SM00278 Helix-hairpin-helix DNA-binding motif class 1 llmg_1923 SM00855 Phosphoglycerate mutase family llmg_1928 SM00387 Histidine kinase-like ATPases llmg_1929 SM00448 cheY-homologous receiver domain llmg_1929 SM00862 Transcriptional regulatory protein, C terminal llmg_1932 SM00382 ATPases associated with a variety of cellular activities llmg_1942 SM00062 Bacterial periplasmic substrate-binding proteins llmg_1942 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. llmg_1943 SM00382 ATPases associated with a variety of cellular activities llmg_1946 SM00382 ATPases associated with a variety of cellular activities llmg_1955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 llmg_1957 SM00382 ATPases associated with a variety of cellular activities llmg_1974 SM00382 ATPases associated with a variety of cellular activities llmg_1978 SM00382 ATPases associated with a variety of cellular activities llmg_1980 SM00046 Diacylglycerol kinase catalytic domain (presumed) llmg_1981 SM00663 RNA polymerase I subunit A N-terminus llmg_1991 SM00829 Enoylreductase llmg_1992 SM00341 Helicase and RNase D C-terminal llmg_1992 SM00487 DEAD-like helicases superfamily llmg_1992 SM00490 helicase superfamily c-terminal domain llmg_1992 SM00956 llmg_1992 llmg_1996 SM01131 llmg_1996 llmg_1999 SM01091 Transporter associated domain llmg_2007 SM00986 Uracil DNA glycosylase superfamily llmg_2007 SM00987 UreE urease accessory protein, C-terminal domain llmg_2013 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain llmg_2021 SM00479 llmg_2021 llmg_2021 SM00491 llmg_2021 llmg_2035 SM01228 llmg_2035 llmg_2040 SM00840 llmg_2040 llmg_2044 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_2044 SM00322 K homology RNA-binding domain llmg_2046 SM01400 llmg_2046 llmg_2056 SM00363 S4 RNA-binding domain llmg_2060 SM00864 Tubulin/FtsZ family, GTPase domain llmg_2060 SM00865 Tubulin/FtsZ family, C-terminal domain llmg_2061 SM00842 Cell division protein FtsA llmg_2063 SM00967 RNA 2'-O ribose methyltransferase substrate binding llmg_2068 SM00422 helix_turn_helix, mercury resistance llmg_2070 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_2078 SM01387 llmg_2078 llmg_2079 SM00220 Serine/Threonine protein kinases, catalytic domain llmg_2079 SM00740 llmg_2079 llmg_2080 SM00331 Sigma factor PP2C-like phosphatases llmg_2080 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain llmg_2082 SM00641 Glycosyl hydrolases family 25 llmg_2103 SM00507 HNH nucleases llmg_2109 SM00382 ATPases associated with a variety of cellular activities llmg_2134 SM01040 BRO family, N-terminal domain llmg_2135 SM00530 Helix-turn-helix XRE-family like proteins llmg_2139 SM00530 Helix-turn-helix XRE-family like proteins llmg_2153 SM00487 DEAD-like helicases superfamily llmg_2153 SM00490 helicase superfamily c-terminal domain llmg_2154 SM01409 llmg_2154 llmg_2155 SM00072 Guanylate kinase homologues. llmg_2156 SM00322 K homology RNA-binding domain llmg_2156 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. llmg_2165 SM00047 Lysozyme subfamily 2 llmg_2169 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain llmg_2195 SM00873 B3/4 domain llmg_2195 SM00874 tRNA synthetase B5 domain llmg_2195 SM00896 Ferredoxin-fold anticodon binding domain llmg_2199 SM00495 Chitin-binding domain type 3 llmg_2199 SM00636 llmg_2199 llmg_2201 SM00788 Adenylosuccinate synthetase llmg_2218 SM00530 Helix-turn-helix XRE-family like proteins llmg_2231 SM00422 helix_turn_helix, mercury resistance llmg_2252 SM00885 D5 N terminal like llmg_2253 SM00942 Primase C terminal 1 (PriCT-1) llmg_2253 SM00943 Bifunctional DNA primase/polymerase, N-terminal llmg_2262 SM00530 Helix-turn-helix XRE-family like proteins llmg_2271 SM00382 ATPases associated with a variety of cellular activities llmg_2277 SM00649 Ribosomal protein L11/L12 llmg_2279 SM00382 ATPases associated with a variety of cellular activities llmg_2282 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_2292 SM00838 Elongation factor G C-terminus llmg_2297 SM00850 LytTr DNA-binding domain llmg_2300 SM00450 Rhodanese Homology Domain llmg_2314 SM00836 DALR anticodon binding domain llmg_2314 SM01016 Arginyl tRNA synthetase N terminal dom llmg_2319 SM00487 DEAD-like helicases superfamily llmg_2319 SM00490 helicase superfamily c-terminal domain llmg_2320 SM00327 von Willebrand factor (vWF) type A domain llmg_2328 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain llmg_2328 SM00940 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal llmg_2330 SM00062 Bacterial periplasmic substrate-binding proteins llmg_2335 SM00014 Acid phosphatase homologues llmg_2341 SM00670 Large family of predicted nucleotide-binding domains llmg_2343 SM00382 ATPases associated with a variety of cellular activities llmg_2354 SM00662 RNA polymerases D llmg_2358 SM00316 Ribosomal protein S1-like RNA-binding domain llmg_2372 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. llmg_2373 SM01374 llmg_2373 llmg_2377 SM00322 K homology RNA-binding domain llmg_2380 SM01382 llmg_2380 llmg_2380 SM01383 llmg_2380 llmg_2384 SM01403 llmg_2384 llmg_2388 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. llmg_2388 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. llmg_2399 SM00382 ATPases associated with a variety of cellular activities llmg_2401 SM00347 helix_turn_helix multiple antibiotic resistance protein llmg_2409 SM00479 llmg_2409 llmg_2409 SM00481 DNA polymerase alpha chain like domain llmg_2413 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. llmg_2416 SM01323 llmg_2416 llmg_2419 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. llmg_2425 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs llmg_2425 SM00474 3'-5' exonuclease llmg_2425 SM00475 5'-3' exonuclease llmg_2425 SM00482 DNA polymerase A domain llmg_2436 SM00729 Elongator protein 3, MiaB family, Radical SAM llmg_2440 SM00729 Elongator protein 3, MiaB family, Radical SAM llmg_2451 SM00530 Helix-turn-helix XRE-family like proteins llmg_2453 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor llmg_2463 SM00873 B3/4 domain llmg_2469 SM01350 llmg_2469 llmg_2478 SM00382 ATPases associated with a variety of cellular activities llmg_2481 SM00830 Chorismate mutase type II llmg_2484 SM01230 llmg_2484 llmg_2485 SM00422 helix_turn_helix, mercury resistance llmg_2486 SM00226 Low molecular weight phosphatase family llmg_2487 SM00382 ATPases associated with a variety of cellular activities llmg_2488 SM00278 Helix-hairpin-helix DNA-binding motif class 1 llmg_2489 SM00853 MutL C terminal dimerisation domain llmg_2489 SM01340 llmg_2489 llmg_2491 SM00533 DNA-binding domain of DNA mismatch repair MUTS family llmg_2491 SM00534 ATPase domain of DNA mismatch repair MUTS family llmg_2502 SM00271 DnaJ molecular chaperone homology domain llmg_2512 SM00419 helix_turn_helix, cAMP Regulatory protein llmg_2518 SM00363 S4 RNA-binding domain llmg_2523 SM00487 DEAD-like helicases superfamily llmg_2523 SM00490 helicase superfamily c-terminal domain llmg_2527 SM01040 BRO family, N-terminal domain llmg_2533 SM00942 Primase C terminal 1 (PriCT-1) llmg_2533 SM00943 Bifunctional DNA primase/polymerase, N-terminal llmg_2534 SM00885 D5 N terminal like llmg_2539 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain llmg_2541 SM00831 Cation transporter/ATPase, N-terminus llmg_2548 SM00382 ATPases associated with a variety of cellular activities llmg_2556 SM00838 Elongation factor G C-terminus llmg_2556 SM00889 Elongation factor G, domain IV llmg_2560 SM00936 Penicillin-binding protein 5, C-terminal domain llmg_2563 SM00729 Elongator protein 3, MiaB family, Radical SAM