llmg_1006 de9366472cdc7f0b02dc3feb21a66ecc 291 Gene3D G3DSA:3.30.420.40 2 105 1.6E-29 T 14-10-2018 llmg_1006 de9366472cdc7f0b02dc3feb21a66ecc 291 ProSitePatterns PS01125 ROK family signature. 128 153 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1006 de9366472cdc7f0b02dc3feb21a66ecc 291 SUPERFAMILY SSF53067 4 285 2.31E-37 T 14-10-2018 llmg_1006 de9366472cdc7f0b02dc3feb21a66ecc 291 Gene3D G3DSA:3.30.420.40 106 290 3.4E-47 T 14-10-2018 llmg_1006 de9366472cdc7f0b02dc3feb21a66ecc 291 Pfam PF00480 ROK family 5 285 2.1E-70 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1496 9900f2c72a182b6a3d0fabf03c84eab6 447 SMART SM00471 48 180 6.1E-13 T 14-10-2018 IPR003607 HD/PDEase domain llmg_1496 9900f2c72a182b6a3d0fabf03c84eab6 447 Pfam PF01966 HD domain 52 173 1.1E-11 T 14-10-2018 IPR006674 HD domain llmg_1496 9900f2c72a182b6a3d0fabf03c84eab6 447 SUPERFAMILY SSF109604 2 415 6.28E-127 T 14-10-2018 llmg_1496 9900f2c72a182b6a3d0fabf03c84eab6 447 Gene3D G3DSA:1.10.3210.10 2 396 3.9E-156 T 14-10-2018 llmg_1496 9900f2c72a182b6a3d0fabf03c84eab6 447 Gene3D G3DSA:1.20.1250.30 228 407 3.9E-156 T 14-10-2018 llmg_1145 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1145 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_1145 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0550 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0550 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_0550 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1714 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1714 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_1714 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1264 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1264 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_1264 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0678 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0678 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_0678 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0900 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0900 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_0900 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1234 719dd278a23392b06db04da3c28d54b0 86 SUPERFAMILY SSF46689 2 83 1.34E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1234 719dd278a23392b06db04da3c28d54b0 86 Gene3D G3DSA:1.10.10.60 6 84 8.3E-7 T 14-10-2018 llmg_1234 719dd278a23392b06db04da3c28d54b0 86 Pfam PF01527 Transposase 3 69 9.0E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 SUPERFAMILY SSF103473 8 399 3.49E-66 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 Gene3D G3DSA:1.20.1250.20 211 402 3.2E-30 T 14-10-2018 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 Gene3D G3DSA:1.20.1250.20 4 210 4.5E-39 T 14-10-2018 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 PRINTS PR01035 Tetracycline resistance protein signature 22 38 1.6E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 PRINTS PR01035 Tetracycline resistance protein signature 283 304 1.6E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 PRINTS PR01035 Tetracycline resistance protein signature 344 367 1.6E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 PRINTS PR01035 Tetracycline resistance protein signature 140 162 1.6E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 PRINTS PR01035 Tetracycline resistance protein signature 52 71 1.6E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0631 78ecb4d2988da7d2a430a894f73c9497 405 Pfam PF07690 Major Facilitator Superfamily 17 241 1.3E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0214 0853792e271757500a08ecdac62ee59b 397 Gene3D G3DSA:3.40.50.300 29 270 1.4E-46 T 14-10-2018 llmg_0214 0853792e271757500a08ecdac62ee59b 397 SMART SM00382 54 226 5.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0214 0853792e271757500a08ecdac62ee59b 397 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0214 0853792e271757500a08ecdac62ee59b 397 Pfam PF00005 ABC transporter 45 176 3.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0214 0853792e271757500a08ecdac62ee59b 397 SUPERFAMILY SSF52540 37 240 2.89E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2008 789aee406451652274ac0e6d611abe3d 943 Pfam PF00005 ABC transporter 622 858 1.9E-9 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:1.20.1580.10 92 491 8.5E-247 T 14-10-2018 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:3.30.190.20 132 243 8.5E-247 T 14-10-2018 llmg_2008 789aee406451652274ac0e6d611abe3d 943 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2008 789aee406451652274ac0e6d611abe3d 943 SUPERFAMILY SSF52540 10 568 9.01E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2008 789aee406451652274ac0e6d611abe3d 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 22.581 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:3.40.50.300 613 934 3.6E-142 T 14-10-2018 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:1.10.8.280 286 402 8.5E-247 T 14-10-2018 llmg_2008 789aee406451652274ac0e6d611abe3d 943 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:1.20.1580.10 691 828 3.6E-142 T 14-10-2018 llmg_2008 789aee406451652274ac0e6d611abe3d 943 SUPERFAMILY SSF52540 612 912 5.63E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2008 789aee406451652274ac0e6d611abe3d 943 Gene3D G3DSA:3.40.50.300 7 594 8.5E-247 T 14-10-2018 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 ProSitePatterns PS00211 ABC transporters family signature. 389 403 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 Pfam PF00005 ABC transporter 14 164 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 SUPERFAMILY SSF52540 2 221 1.44E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 Pfam PF00005 ABC transporter 263 416 1.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 SMART SM00382 271 465 7.7E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 SMART SM00382 23 212 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 SUPERFAMILY SSF52540 261 477 4.02E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 Gene3D G3DSA:3.40.50.300 246 485 8.1E-46 T 14-10-2018 llmg_0787 091ccb672334c135b9b4c4e3f92b1cf9 488 Gene3D G3DSA:3.40.50.300 1 233 2.2E-58 T 14-10-2018 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 Hamap MF_01396 ATP synthase subunit c [atpH]. 6 71 15.035 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 Gene3D G3DSA:1.20.20.10 1 71 1.9E-22 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 16 70 1.9E-16 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 ProSitePatterns PS00605 ATP synthase c subunit signature. 36 57 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 Pfam PF00137 ATP synthase subunit C 10 69 8.4E-13 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 SUPERFAMILY SSF81333 9 70 1.23E-16 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily llmg_1952 7949c73a0a130322f0badf92105d11f0 71 PRINTS PR00124 ATP synthase C subunit signature 29 44 7.5E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 PRINTS PR00124 ATP synthase C subunit signature 8 27 7.5E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1952 7949c73a0a130322f0badf92105d11f0 71 PRINTS PR00124 ATP synthase C subunit signature 46 71 7.5E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1537 18f90d5dc927e09cb4e0ea5941de82e4 277 Gene3D G3DSA:3.30.420.10 1 175 1.7E-44 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1537 18f90d5dc927e09cb4e0ea5941de82e4 277 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 167 4.6E-28 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_1537 18f90d5dc927e09cb4e0ea5941de82e4 277 SMART SM00479 4 172 3.8E-39 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_1537 18f90d5dc927e09cb4e0ea5941de82e4 277 Pfam PF00929 Exonuclease 6 163 9.4E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_1537 18f90d5dc927e09cb4e0ea5941de82e4 277 SUPERFAMILY SSF53098 4 191 4.75E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1415 a1313c3f21e7396f0bb074a3315d8525 243 Gene3D G3DSA:3.10.129.10 2 241 1.7E-60 T 14-10-2018 llmg_1415 a1313c3f21e7396f0bb074a3315d8525 243 Pfam PF01643 Acyl-ACP thioesterase 3 225 6.9E-70 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 llmg_1415 a1313c3f21e7396f0bb074a3315d8525 243 SUPERFAMILY SSF54637 1 145 3.69E-37 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_1415 a1313c3f21e7396f0bb074a3315d8525 243 SUPERFAMILY SSF54637 160 222 1.73E-15 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Gene3D G3DSA:3.40.1170.10 1 118 3.0E-46 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SUPERFAMILY SSF55271 4 113 4.71E-41 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 PIRSF PIRSF037677 1 173 1.2E-32 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 PIRSF PIRSF037677 178 831 8.0E-136 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Gene3D G3DSA:3.40.50.300 553 840 1.3E-101 T 14-10-2018 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Gene3D G3DSA:3.30.420.110 123 245 1.8E-16 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SMART SM00534 594 781 3.6E-115 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SUPERFAMILY SSF52540 552 785 3.61E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Gene3D G3DSA:1.10.1420.10 250 543 3.4E-91 T 14-10-2018 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Pfam PF05192 MutS domain III 253 544 8.7E-40 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SUPERFAMILY SSF53150 119 263 9.16E-30 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Pfam PF05188 MutS domain II 124 237 4.7E-16 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Pfam PF00488 MutS domain V 597 784 3.8E-83 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SMART SM00533 268 577 1.5E-95 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 6 837 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 SUPERFAMILY SSF48334 251 550 3.4E-82 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 675 691 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Gene3D G3DSA:1.10.1420.10 372 488 3.4E-91 T 14-10-2018 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 5 832 24.178 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Pfam PF01624 MutS domain I 7 116 7.8E-43 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 llmg_2491 8e020e57cfe3c85cade8bb1b545c98dc 840 Pfam PF05190 MutS family domain IV 413 503 1.9E-27 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 396 407 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 132 145 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 199 214 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 261 274 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 354 368 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 458 471 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 156 164 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 185 198 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 PRINTS PR00415 Aconitase family signature 275 288 3.3E-40 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Gene3D G3DSA:3.30.499.20 1 354 4.8E-155 T 14-10-2018 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Gene3D G3DSA:3.20.19.10 619 848 1.2E-93 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Gene3D G3DSA:1.10.1440.20 556 617 2.0E-21 T 14-10-2018 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 SUPERFAMILY SSF52016 595 847 2.16E-75 T 14-10-2018 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 ProSitePatterns PS01244 Aconitase family signature 2. 458 471 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Pfam PF00330 Aconitase family (aconitate hydratase) 63 527 4.5E-174 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Pfam PF00694 Aconitase C-terminal domain 657 781 1.6E-40 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 Gene3D G3DSA:3.30.499.10 355 555 1.1E-88 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 SUPERFAMILY SSF53732 3 592 2.49E-209 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 10 847 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 llmg_0636 13649486389f9d95eb1ffd4774952cb6 848 ProSitePatterns PS00450 Aconitase family signature 1. 392 408 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 llmg_0626 4938a8595f76878899c89cd15861c930 189 SUPERFAMILY SSF46689 12 74 7.18E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0626 4938a8595f76878899c89cd15861c930 189 Gene3D G3DSA:1.10.357.10 1 189 3.3E-70 T 14-10-2018 llmg_1502 989d176350325250b0f181a85a7e3150 222 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 124 194 9.7E-26 T 14-10-2018 IPR006343 DnaD domain llmg_1502 989d176350325250b0f181a85a7e3150 222 SUPERFAMILY SSF158499 127 188 7.19E-16 T 14-10-2018 IPR034829 DnaD-like domain superfamily llmg_1502 989d176350325250b0f181a85a7e3150 222 Gene3D G3DSA:1.10.10.10 3 119 1.7E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1502 989d176350325250b0f181a85a7e3150 222 Gene3D G3DSA:1.10.10.630 120 195 1.3E-24 T 14-10-2018 IPR034829 DnaD-like domain superfamily llmg_1502 989d176350325250b0f181a85a7e3150 222 Pfam PF07261 Replication initiation and membrane attachment 126 195 2.5E-17 T 14-10-2018 IPR006343 DnaD domain llmg_0507 5ff8e291835db218d00770549e0577d6 549 SUPERFAMILY SSF53850 37 535 4.73E-99 T 14-10-2018 llmg_0507 5ff8e291835db218d00770549e0577d6 549 Gene3D G3DSA:3.40.190.10 47 532 1.7E-138 T 14-10-2018 llmg_0507 5ff8e291835db218d00770549e0577d6 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 467 4.7E-63 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_0507 5ff8e291835db218d00770549e0577d6 549 Gene3D G3DSA:3.90.76.10 67 189 1.7E-138 T 14-10-2018 llmg_0507 5ff8e291835db218d00770549e0577d6 549 Gene3D G3DSA:3.10.105.10 296 520 1.7E-138 T 14-10-2018 llmg_0507 5ff8e291835db218d00770549e0577d6 549 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site llmg_0507 5ff8e291835db218d00770549e0577d6 549 PIRSF PIRSF002741 1 545 7.3E-77 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_0247 c6b81fc7aac4a0e1d22dd48adb5160af 279 Gene3D G3DSA:3.40.50.720 1 273 2.8E-48 T 14-10-2018 llmg_0247 c6b81fc7aac4a0e1d22dd48adb5160af 279 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 184 2.4E-26 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 llmg_0247 c6b81fc7aac4a0e1d22dd48adb5160af 279 SUPERFAMILY SSF51735 1 267 1.32E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 SUPERFAMILY SSF50249 1 65 1.22E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 Gene3D G3DSA:2.40.50.140 1 65 5.9E-21 T 14-10-2018 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 PIRSF PIRSF002599 1 66 1.0E-20 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 PRINTS PR00050 Cold shock protein signature 39 57 4.0E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 PRINTS PR00050 Cold shock protein signature 4 19 4.0E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 PRINTS PR00050 Cold shock protein signature 24 33 4.0E-12 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 SMART SM00357 3 66 3.1E-23 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1847 c318e86b8decb1c73f84d1534b58af0b 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.4E-20 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 Gene3D G3DSA:2.60.40.10 1 134 2.9E-38 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 SUPERFAMILY SSF51445 77 519 1.62E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 Gene3D G3DSA:3.20.20.80 142 517 6.7E-146 T 14-10-2018 llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 Pfam PF00128 Alpha amylase, catalytic domain 183 487 4.0E-78 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 SUPERFAMILY SSF81296 1 111 2.1E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 Gene3D G3DSA:3.90.400.10 256 317 6.7E-146 T 14-10-2018 llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 130 7.1E-42 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 llmg_0740 3361cc540559acb2fe47f3c3eb61cd40 584 SMART SM00642 148 515 8.6E-116 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0250 152cf11994fe5559415663f4e4028b41 123 SMART SM00422 2 70 6.8E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 Pfam PF13411 MerR HTH family regulatory protein 3 68 2.3E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 4.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 4.1E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0250 152cf11994fe5559415663f4e4028b41 123 SUPERFAMILY SSF46955 3 115 1.14E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_0250 152cf11994fe5559415663f4e4028b41 123 Gene3D G3DSA:1.10.1660.10 2 122 9.3E-26 T 14-10-2018 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 Gene3D G3DSA:3.30.70.580 1 107 1.6E-32 T 14-10-2018 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 242 4.6E-61 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 PIRSF PIRSF001430 1 252 3.5E-78 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 247 34.436 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 SUPERFAMILY SSF55120 1 251 7.05E-79 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 Gene3D G3DSA:3.30.70.660 108 246 3.1E-41 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 Pfam PF01416 tRNA pseudouridine synthase 145 248 1.3E-27 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0462 c5bf5214ac7c6f933dc58a818a0cd97c 253 Pfam PF01416 tRNA pseudouridine synthase 6 105 1.4E-12 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 SUPERFAMILY SSF81338 5 286 2.62E-57 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 Gene3D G3DSA:1.20.1080.10 169 287 1.6E-21 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 Gene3D G3DSA:1.20.1080.10 2 168 1.4E-34 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 7 26 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 49 73 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 148 166 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 86 105 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 215 237 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 PRINTS PR00783 Major intrinsic protein family signature 265 285 1.1E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 ProSitePatterns PS00221 MIP family signature. 67 75 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 Pfam PF00230 Major intrinsic protein 205 282 9.1E-12 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0870 d2fa5e79d9ca5c4ad47b4c514450d774 287 Pfam PF00230 Major intrinsic protein 4 165 3.8E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Gene3D G3DSA:4.10.860.10 639 691 1.7E-7 T 14-10-2018 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Pfam PF12344 Ultra-violet resistance protein B 590 628 1.5E-19 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Pfam PF00271 Helicase conserved C-terminal domain 441 550 7.4E-18 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Pfam PF02151 UvrB/uvrC motif 657 690 4.8E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Gene3D G3DSA:3.40.50.300 282 419 2.5E-53 T 14-10-2018 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 10 561 9.5E-297 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 SUPERFAMILY SSF52540 42 567 1.96E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 SUPERFAMILY SSF52540 9 420 9.13E-139 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Pfam PF04851 Type III restriction enzyme, res subunit 22 144 1.3E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 SUPERFAMILY SSF46600 647 690 8.89E-10 T 14-10-2018 IPR036876 UVR domain superfamily llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Gene3D G3DSA:3.40.50.300 2 240 1.1E-80 T 14-10-2018 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Hamap MF_00204 UvrABC system protein B [uvrB]. 9 691 42.16 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 SMART SM00490 465 551 6.0E-20 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 SMART SM00487 15 430 3.4E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_0534 9e8c9648c7ca402e647fd0b202bb6b16 692 Gene3D G3DSA:3.40.50.300 420 630 6.1E-44 T 14-10-2018 llmg_2419 8be4f9caee6719897199d0505eecf499 407 Pfam PF13365 Trypsin-like peptidase domain 107 252 9.0E-29 T 14-10-2018 llmg_2419 8be4f9caee6719897199d0505eecf499 407 SUPERFAMILY SSF50156 281 391 4.07E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 llmg_2419 8be4f9caee6719897199d0505eecf499 407 SUPERFAMILY SSF50494 56 286 3.1E-51 T 14-10-2018 IPR009003 Peptidase S1, PA clan llmg_2419 8be4f9caee6719897199d0505eecf499 407 SMART SM00228 295 382 1.9E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 llmg_2419 8be4f9caee6719897199d0505eecf499 407 Gene3D G3DSA:2.30.42.10 295 398 3.0E-29 T 14-10-2018 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 140 160 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 340 352 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 181 205 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 119 131 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 8.8E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 llmg_2419 8be4f9caee6719897199d0505eecf499 407 Gene3D G3DSA:2.40.10.10 38 167 7.8E-25 T 14-10-2018 llmg_2419 8be4f9caee6719897199d0505eecf499 407 Gene3D G3DSA:2.40.10.10 171 292 3.8E-34 T 14-10-2018 llmg_2419 8be4f9caee6719897199d0505eecf499 407 Pfam PF13180 PDZ domain 295 391 1.1E-25 T 14-10-2018 IPR001478 PDZ domain GO:0005515 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 SMART SM00986 47 207 1.0E-29 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 SMART SM00987 47 207 1.0E-29 T 14-10-2018 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 4 211 1.3E-64 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 55 64 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 SUPERFAMILY SSF52141 3 218 3.05E-75 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 3 218 36.702 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 Gene3D G3DSA:3.40.470.10 1 219 3.8E-82 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0244 2128ae9560bb0c06d0c7e41db661de97 219 Pfam PF03167 Uracil DNA glycosylase superfamily 52 206 1.8E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_1083 e76ff4eb74caa42693cc70c158045c4b 184 Pfam PF06736 Protein of unknown function (DUF1211) 5 90 1.6E-19 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 llmg_0050 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_0050 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0050 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_0050 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_0050 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0823 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_0823 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0823 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_0823 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_0823 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1074 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_1074 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1074 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_1074 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_1074 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1612 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_1612 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1612 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_1612 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_1612 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0683 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_0683 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0683 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_0683 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_0683 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2109 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_2109 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2109 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_2109 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_2109 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1261 54ac56e819124d9226c2b6c671c0f474 252 Gene3D G3DSA:3.40.50.300 60 248 1.8E-53 T 14-10-2018 llmg_1261 54ac56e819124d9226c2b6c671c0f474 252 SMART SM00382 97 230 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1261 54ac56e819124d9226c2b6c671c0f474 252 PIRSF PIRSF003073 1 251 5.6E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein llmg_1261 54ac56e819124d9226c2b6c671c0f474 252 Pfam PF01695 IstB-like ATP binding protein 56 229 3.5E-59 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_1261 54ac56e819124d9226c2b6c671c0f474 252 SUPERFAMILY SSF52540 65 227 8.18E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1246 5cffa6005780026ef1747708e836fdd1 107 Pfam PF01022 Bacterial regulatory protein, arsR family 16 60 1.3E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.8E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.8E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.8E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 1.8E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 llmg_1246 5cffa6005780026ef1747708e836fdd1 107 SUPERFAMILY SSF46785 1 89 9.58E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1246 5cffa6005780026ef1747708e836fdd1 107 Gene3D G3DSA:1.10.10.10 1 101 1.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1246 5cffa6005780026ef1747708e836fdd1 107 SMART SM00418 8 88 3.4E-25 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Pfam PF13538 UvrD-like helicase C-terminal domain 664 710 4.4E-18 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Pfam PF13604 AAA domain 331 522 6.6E-42 T 14-10-2018 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 SMART SM00278 188 207 4.5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 SMART SM00278 96 112 70.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Gene3D G3DSA:2.30.30.940 586 664 5.9E-133 T 14-10-2018 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Pfam PF14490 Helix-hairpin-helix containing domain 146 237 5.7E-29 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 7 736 6.4E-258 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Gene3D G3DSA:3.40.50.300 500 726 5.9E-133 T 14-10-2018 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 SUPERFAMILY SSF52540 186 500 5.33E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Gene3D G3DSA:3.40.50.300 321 732 5.9E-133 T 14-10-2018 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 SUPERFAMILY SSF52540 452 736 1.68E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Gene3D G3DSA:1.10.10.2220 188 296 2.8E-16 T 14-10-2018 llmg_1922 5f689c0f8728b8a16f2cbb5dde60b838 833 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 4 751 27.869 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 SUPERFAMILY SSF63520 251 352 1.1E-15 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 SUPERFAMILY SSF55804 496 641 6.54E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 640 1.8E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Pfam PF00874 PRD domain 261 347 6.3E-12 T 14-10-2018 IPR011608 PRD domain GO:0006355 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Gene3D G3DSA:3.40.930.10 495 645 7.2E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Gene3D G3DSA:1.10.10.10 69 147 1.6E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Gene3D G3DSA:3.40.50.2300 359 444 3.0E-7 T 14-10-2018 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Gene3D G3DSA:1.10.1790.10 252 349 3.1E-10 T 14-10-2018 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 SUPERFAMILY SSF52794 358 441 1.62E-5 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_0865 e35c721bb8ab13ad9034fdfb90e17ad6 646 Pfam PF08279 HTH domain 87 144 3.2E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 llmg_0099 6c13c8188f944ebec655c7b2d06f95f6 57 SUPERFAMILY SSF57829 2 54 2.08E-15 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 llmg_0099 6c13c8188f944ebec655c7b2d06f95f6 57 Pfam PF01783 Ribosomal L32p protein family 2 54 3.8E-17 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0099 6c13c8188f944ebec655c7b2d06f95f6 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 7.8E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0099 6c13c8188f944ebec655c7b2d06f95f6 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.9 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 SUPERFAMILY SSF48300 3 51 8.24E-14 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 Gene3D G3DSA:3.30.1390.10 53 121 1.3E-28 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 2.0E-27 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 23.26 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 Gene3D G3DSA:1.20.5.710 3 52 5.1E-18 T 14-10-2018 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 6.9E-18 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 SUPERFAMILY SSF54736 55 121 4.88E-23 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 7.4E-29 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1208 d0edc3359a68661a30ebb280fb01e7d3 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 6.1E-44 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:3.40.50.11180 33 321 5.6E-54 T 14-10-2018 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Pfam PF00270 DEAD/DEAH box helicase 629 787 2.0E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF52540 386 490 3.61E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:2.30.30.840 506 564 2.7E-235 T 14-10-2018 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1100 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:3.40.50.300 565 804 2.7E-235 T 14-10-2018 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SMART SM00490 849 933 6.7E-16 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SMART SM00982 1027 1127 1.1E-34 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF141259 494 571 1.15E-24 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF52540 805 1010 8.38E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1113 28.071 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF52540 547 806 2.65E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:3.40.50.300 501 1010 2.7E-235 T 14-10-2018 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF143517 1014 1169 1.26E-32 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SMART SM01058 502 599 1.2E-42 T 14-10-2018 IPR003711 CarD-like/TRCF domain llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SMART SM00487 623 813 5.3E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 SUPERFAMILY SSF52540 15 377 4.48E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:3.30.2060.10 139 224 5.6E-54 T 14-10-2018 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Pfam PF00271 Helicase conserved C-terminal domain 829 932 5.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Gene3D G3DSA:3.90.1150.50 1023 1179 6.4E-47 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Pfam PF03461 TRCF domain 1028 1119 6.6E-25 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 llmg_0013 274b563eb1c8186b488b8af4c92b82ab 1180 Pfam PF02559 CarD-like/TRCF domain 503 598 1.3E-27 T 14-10-2018 IPR003711 CarD-like/TRCF domain llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 Gene3D G3DSA:3.30.70.1450 432 508 1.3E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 PRINTS PR00762 Chloride channel signature 375 394 6.1E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 PRINTS PR00762 Chloride channel signature 161 180 6.1E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 PRINTS PR00762 Chloride channel signature 81 98 6.1E-18 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 Pfam PF02080 TrkA-C domain 440 497 1.0E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 SUPERFAMILY SSF81340 12 423 2.88E-103 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 SUPERFAMILY SSF116726 433 505 3.92E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 Pfam PF00654 Voltage gated chloride channel 69 407 2.0E-89 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_0758 f28e2e4f960b26c735a5fe02bbee080c 512 Gene3D G3DSA:1.10.3080.10 1 431 2.6E-105 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 Pfam PF02502 Ribose/Galactose Isomerase 4 140 1.4E-52 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 4 145 2.6E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 PIRSF PIRSF005384 1 147 1.5E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 Gene3D G3DSA:3.40.1400.10 1 148 2.2E-58 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 5.9E-62 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 llmg_0958 04add2fa4597db4da04ddb69ed44bf68 149 SUPERFAMILY SSF89623 1 144 1.44E-55 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 497 211.118 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 ProSitePatterns PS00455 Putative AMP-binding domain signature. 149 160 - T 14-10-2018 IPR020845 AMP-binding, conserved site llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 SUPERFAMILY SSF56801 3 496 7.59E-99 T 14-10-2018 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 Pfam PF00501 AMP-binding enzyme 9 394 1.4E-66 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 496 5.6E-221 T 14-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 Gene3D G3DSA:3.40.50.12780 1 388 6.2E-92 T 14-10-2018 llmg_1219 006dad57e15d8d69c9a658bbfbd9d1e3 499 Gene3D G3DSA:3.30.300.30 389 498 1.7E-28 T 14-10-2018 llmg_0492 cdfd6e1fdceed28d5a737285dab8f3c3 278 Gene3D G3DSA:3.30.1180.10 152 278 1.2E-32 T 14-10-2018 llmg_0492 cdfd6e1fdceed28d5a737285dab8f3c3 278 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 275 5.3E-86 T 14-10-2018 IPR003797 DegV llmg_0492 cdfd6e1fdceed28d5a737285dab8f3c3 278 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 276 1.7E-90 T 14-10-2018 IPR003797 DegV llmg_0492 cdfd6e1fdceed28d5a737285dab8f3c3 278 Gene3D G3DSA:3.40.50.10170 1 151 3.3E-50 T 14-10-2018 llmg_0492 cdfd6e1fdceed28d5a737285dab8f3c3 278 SUPERFAMILY SSF82549 1 275 1.33E-77 T 14-10-2018 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 Gene3D G3DSA:3.40.50.300 9 182 3.5E-67 T 14-10-2018 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 SUPERFAMILY SSF52540 3 189 5.4E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 ProSitePatterns PS00856 Guanylate kinase-like signature. 39 56 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 Gene3D G3DSA:3.30.63.10 36 95 3.5E-67 T 14-10-2018 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 Hamap MF_00328 Guanylate kinase [gmk]. 3 186 37.066 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 SMART SM00072 4 186 5.6E-72 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 183 1.7E-74 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 llmg_2155 a5981f099714e3e873e9036ae1ec38ea 205 Pfam PF00625 Guanylate kinase 7 185 2.0E-50 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit llmg_0105 c79c3bc8f8b5d95c0893f826b96f1388 155 Pfam PF11217 Protein of unknown function (DUF3013) 1 154 1.5E-59 T 14-10-2018 IPR021380 Protein of unknown function DUF3013 llmg_0105 c79c3bc8f8b5d95c0893f826b96f1388 155 Gene3D G3DSA:3.40.50.11250 7 155 6.8E-44 T 14-10-2018 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 Pfam PF00005 ABC transporter 357 504 3.8E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 Gene3D G3DSA:1.20.1560.10 17 325 9.5E-35 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 SUPERFAMILY SSF52540 334 572 7.28E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 SUPERFAMILY SSF90123 20 322 1.7E-44 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 Gene3D G3DSA:3.40.50.300 328 575 1.1E-64 T 14-10-2018 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 Pfam PF00664 ABC transporter transmembrane region 27 277 9.0E-21 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 SMART SM00382 365 556 1.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1862 31f0381ae8ecbe7a399356a89ffa877a 591 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 546 5.0E-160 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 Gene3D G3DSA:3.30.70.260 1 79 1.9E-19 T 14-10-2018 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 Pfam PF01842 ACT domain 4 69 2.4E-9 T 14-10-2018 IPR002912 ACT domain llmg_1278 dcde0042894a7a9eeee23695729b6392 158 SUPERFAMILY SSF55021 2 81 1.48E-15 T 14-10-2018 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 SUPERFAMILY SSF55021 80 158 4.69E-22 T 14-10-2018 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.3E-44 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 Pfam PF10369 Small subunit of acetolactate synthase 85 158 7.0E-26 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 llmg_1278 dcde0042894a7a9eeee23695729b6392 158 Gene3D G3DSA:3.30.70.1150 81 157 2.2E-25 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal llmg_1278 dcde0042894a7a9eeee23695729b6392 158 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 10 77 2.0E-30 T 14-10-2018 llmg_0307 889ed26a87efea5737c159292a5b6ca0 189 Gene3D G3DSA:3.40.630.30 31 189 6.9E-35 T 14-10-2018 llmg_0307 889ed26a87efea5737c159292a5b6ca0 189 Pfam PF00583 Acetyltransferase (GNAT) family 69 164 3.5E-17 T 14-10-2018 IPR000182 GNAT domain llmg_0307 889ed26a87efea5737c159292a5b6ca0 189 SUPERFAMILY SSF55729 40 187 1.28E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0307 889ed26a87efea5737c159292a5b6ca0 189 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 52 183 6.1E-31 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 SUPERFAMILY SSF51735 107 279 3.75E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 Gene3D G3DSA:3.40.50.720 108 256 5.0E-87 T 14-10-2018 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 283 6.4E-68 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 SUPERFAMILY SSF53223 2 106 2.59E-33 T 14-10-2018 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 284 33.18 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 Gene3D G3DSA:3.40.50.10860 11 273 5.0E-87 T 14-10-2018 llmg_1939 e20d4a6d1036c52944d71df12dadcbac 286 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 1.3E-27 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 354 404 1.0E-10 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Gene3D G3DSA:3.40.50.10710 204 354 1.4E-136 T 14-10-2018 llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Gene3D G3DSA:3.10.20.580 446 552 3.0E-35 T 14-10-2018 llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Hamap MF_01491 Ribonuclease J [rnj]. 1 552 36.714 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 SMART SM00849 16 212 3.1E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 4 550 3.4E-141 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Pfam PF00753 Metallo-beta-lactamase superfamily 15 172 1.3E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 SUPERFAMILY SSF56281 4 421 7.24E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0876 cecf69317a33c1ffda7630a47bb71f35 570 Gene3D G3DSA:3.60.15.10 8 439 1.4E-136 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_1460 8ad5723845d44b9261867a53f742e66e 366 SMART SM00382 45 248 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1460 8ad5723845d44b9261867a53f742e66e 366 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 306 1.8E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_1460 8ad5723845d44b9261867a53f742e66e 366 Gene3D G3DSA:3.40.50.300 10 338 2.1E-86 T 14-10-2018 llmg_1460 8ad5723845d44b9261867a53f742e66e 366 Pfam PF00005 ABC transporter 37 190 7.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1460 8ad5723845d44b9261867a53f742e66e 366 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 1.1E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_1460 8ad5723845d44b9261867a53f742e66e 366 SUPERFAMILY SSF52540 12 261 6.1E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0999 228303f584abc1e984c58029181e9a4e 161 SUPERFAMILY SSF52255 3 160 3.14E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 llmg_0999 228303f584abc1e984c58029181e9a4e 161 PIRSF PIRSF001338 1 161 6.1E-72 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 llmg_0999 228303f584abc1e984c58029181e9a4e 161 SMART SM01001 2 153 8.0E-99 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 llmg_0999 228303f584abc1e984c58029181e9a4e 161 Gene3D G3DSA:3.40.50.7700 1 161 3.0E-70 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 llmg_0999 228303f584abc1e984c58029181e9a4e 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 160 3.6E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 llmg_0999 228303f584abc1e984c58029181e9a4e 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 157 32.974 T 14-10-2018 IPR033747 Class I PurE llmg_0999 228303f584abc1e984c58029181e9a4e 161 Pfam PF00731 AIR carboxylase 3 150 4.8E-64 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 376 1.3E-88 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 SUPERFAMILY SSF51338 1 380 5.59E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 SUPERFAMILY SSF51556 53 350 2.27E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 Gene3D G3DSA:3.20.20.140 53 350 1.1E-115 T 14-10-2018 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 Gene3D G3DSA:2.30.40.10 16 377 1.1E-115 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 Pfam PF01979 Amidohydrolase family 50 365 1.5E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 llmg_1117 6f93a6f92885ed1c26ec1c33fc28d32c 382 PIRSF PIRSF038994 2 382 9.3E-110 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 llmg_1182 584d241b99e8962c7398ac26423d29ff 203 SMART SM01266 7 61 1.6E-7 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 llmg_1182 584d241b99e8962c7398ac26423d29ff 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 96 110 0.092 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_1182 584d241b99e8962c7398ac26423d29ff 203 Pfam PF12464 Maltose acetyltransferase 12 60 8.1E-6 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 llmg_1182 584d241b99e8962c7398ac26423d29ff 203 SUPERFAMILY SSF51161 6 198 5.13E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_1182 584d241b99e8962c7398ac26423d29ff 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 167 1.0E-11 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_1182 584d241b99e8962c7398ac26423d29ff 203 Gene3D G3DSA:2.160.10.10 4 201 6.3E-63 T 14-10-2018 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SUPERFAMILY SSF52540 422 711 1.04E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 643 713 7.7E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 584 598 4.2E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 477 495 4.2E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 522 540 4.2E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 551 569 4.2E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 507 525 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 240 252 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Gene3D G3DSA:1.10.8.60 643 744 9.8E-23 T 14-10-2018 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SUPERFAMILY SSF46600 354 397 1.7E-6 T 14-10-2018 IPR036876 UVR domain superfamily llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SUPERFAMILY SSF52540 106 358 1.32E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Pfam PF02151 UvrB/uvrC motif 360 393 7.4E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 149 268 2.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Gene3D G3DSA:3.40.50.300 104 292 3.0E-65 T 14-10-2018 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SMART SM00382 144 284 8.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SMART SM00382 473 644 3.9E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 SMART SM01086 643 730 4.9E-29 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Pfam PF07724 AAA domain (Cdc48 subfamily) 472 635 6.4E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Gene3D G3DSA:3.40.50.300 404 641 3.0E-89 T 14-10-2018 llmg_0528 d2da696f1fb65e45e3e99a48d3614621 748 Gene3D G3DSA:1.10.8.60 293 376 1.8E-28 T 14-10-2018 llmg_0521 c4095a5da174902693b71257ce63b415 447 Gene3D G3DSA:1.10.10.10 370 447 1.8E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 4 54 5.6E-7 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal llmg_0521 c4095a5da174902693b71257ce63b415 447 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 211 447 1.1E-121 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 llmg_0521 c4095a5da174902693b71257ce63b415 447 SUPERFAMILY SSF88659 288 362 2.05E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF00140 Sigma-70 factor, region 1.2 174 206 1.9E-12 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF03979 Sigma-70 factor, region 1.1 85 162 2.1E-5 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 213 436 2.8E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 PRINTS PR00046 Major sigma-70 factor signature 263 271 1.2E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 PRINTS PR00046 Major sigma-70 factor signature 408 423 1.2E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 PRINTS PR00046 Major sigma-70 factor signature 423 434 1.2E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 PRINTS PR00046 Major sigma-70 factor signature 387 399 1.2E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 PRINTS PR00046 Major sigma-70 factor signature 239 252 1.2E-30 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF04542 Sigma-70 region 2 215 284 1.7E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF04539 Sigma-70 region 3 294 370 7.1E-31 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 Gene3D G3DSA:1.10.10.10 288 364 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0521 c4095a5da174902693b71257ce63b415 447 Gene3D G3DSA:1.10.601.10 205 287 1.5E-51 T 14-10-2018 llmg_0521 c4095a5da174902693b71257ce63b415 447 SUPERFAMILY SSF88946 105 282 1.73E-52 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 408 434 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 84 447 31.866 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 llmg_0521 c4095a5da174902693b71257ce63b415 447 SUPERFAMILY SSF88659 345 444 2.62E-27 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_0521 c4095a5da174902693b71257ce63b415 447 Gene3D G3DSA:1.20.120.1810 169 204 3.2E-6 T 14-10-2018 llmg_0521 c4095a5da174902693b71257ce63b415 447 Pfam PF04545 Sigma-70, region 4 383 436 5.5E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 llmg_0521 c4095a5da174902693b71257ce63b415 447 Gene3D G3DSA:1.10.10.2480 4 66 4.2E-9 T 14-10-2018 llmg_0521 c4095a5da174902693b71257ce63b415 447 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 239 252 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 234 496 2.3E-57 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 SUPERFAMILY SSF161098 13 195 8.83E-37 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 Gene3D G3DSA:3.40.190.10 244 500 1.0E-89 T 14-10-2018 llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 Gene3D G3DSA:1.10.3720.10 10 205 2.4E-33 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 203 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 Gene3D G3DSA:3.40.190.120 337 438 1.0E-89 T 14-10-2018 llmg_1699 6644cbaaf58eaa05d1c7a00cf0180537 500 SUPERFAMILY SSF53850 234 499 9.0E-67 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 15 646 2.7E-302 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 12 651 90.266 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 641 2.6E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 Gene3D G3DSA:3.30.230.10 232 410 3.9E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 482 491 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 386 406 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 232 254 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 605 617 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 205 218 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 15 25 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 190 205 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 372 386 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 621 637 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR01159 DNA gyrase subunit B signature 324 340 1.8E-76 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1631 27452f8500197ad50e482c235b29aebf 651 Pfam PF00204 DNA gyrase B 233 402 6.7E-65 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1631 27452f8500197ad50e482c235b29aebf 651 SUPERFAMILY SSF54211 233 403 2.09E-62 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1631 27452f8500197ad50e482c235b29aebf 651 SUPERFAMILY SSF55874 14 222 6.55E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1631 27452f8500197ad50e482c235b29aebf 651 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 42 183 8.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1631 27452f8500197ad50e482c235b29aebf 651 Gene3D G3DSA:3.40.50.670 411 651 8.8E-102 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 44 59 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 280 293 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 516 533 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 536 548 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 122 136 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 498 514 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 79 92 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 432 446 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 PRINTS PR00418 DNA topoisomerase II family signature 584 600 6.8E-69 T 14-10-2018 llmg_1631 27452f8500197ad50e482c235b29aebf 651 SMART SM00387 40 184 6.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1631 27452f8500197ad50e482c235b29aebf 651 Gene3D G3DSA:3.30.565.10 11 231 9.2E-91 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1631 27452f8500197ad50e482c235b29aebf 651 SMART SM00433 44 645 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1631 27452f8500197ad50e482c235b29aebf 651 SUPERFAMILY SSF56719 406 645 7.06E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1631 27452f8500197ad50e482c235b29aebf 651 ProSitePatterns PS00177 DNA topoisomerase II signature. 434 442 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1631 27452f8500197ad50e482c235b29aebf 651 Pfam PF01751 Toprim domain 431 542 2.2E-17 T 14-10-2018 IPR006171 TOPRIM domain llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 Gene3D G3DSA:3.40.50.300 6 437 1.4E-202 T 14-10-2018 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 Pfam PF01268 Formate--tetrahydrofolate ligase 2 555 2.8E-265 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 Gene3D G3DSA:3.30.1510.10 129 247 1.4E-202 T 14-10-2018 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 555 48.948 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 SUPERFAMILY SSF52540 4 553 2.78E-241 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 Gene3D G3DSA:3.10.410.10 443 531 3.8E-31 T 14-10-2018 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 llmg_1595 ef86e1d72fe8c4647ec4f820927fc990 555 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 2 62 14.867 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 60 1.4E-12 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 SUPERFAMILY SSF63562 2 78 6.98E-22 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 Pfam PF01192 RNA polymerase Rpb6 9 61 4.5E-10 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 SMART SM01409 9 61 3.4E-13 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 llmg_2154 28360686818b78ccda12eec2bcc7c436 117 Gene3D G3DSA:3.90.940.10 2 117 1.6E-14 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 llmg_0338 a415ea7359fbf327662a15c7184b6e0f 287 Gene3D G3DSA:3.40.190.10 122 232 3.6E-79 T 14-10-2018 llmg_0338 a415ea7359fbf327662a15c7184b6e0f 287 Pfam PF03180 NLPA lipoprotein 41 283 6.6E-90 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0338 a415ea7359fbf327662a15c7184b6e0f 287 PIRSF PIRSF002854 2 283 1.2E-84 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0338 a415ea7359fbf327662a15c7184b6e0f 287 SUPERFAMILY SSF53850 40 285 7.96E-72 T 14-10-2018 llmg_0338 a415ea7359fbf327662a15c7184b6e0f 287 Gene3D G3DSA:3.40.190.10 43 273 3.6E-79 T 14-10-2018 llmg_1141 8740ca0a6e255d64d0bbddee1bb518bc 107 SMART SM00530 10 64 5.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1141 8740ca0a6e255d64d0bbddee1bb518bc 107 SUPERFAMILY SSF47413 5 67 9.7E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1141 8740ca0a6e255d64d0bbddee1bb518bc 107 Gene3D G3DSA:1.10.260.40 9 100 1.8E-9 T 14-10-2018 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 5 427 1.1E-122 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 SUPERFAMILY SSF53244 296 434 4.76E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Pfam PF01225 Mur ligase family, catalytic domain 4 103 5.7E-22 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 SUPERFAMILY SSF51984 3 89 1.24E-16 T 14-10-2018 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 SUPERFAMILY SSF53623 90 295 3.79E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 378 1.3E-17 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 2 437 34.073 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Pfam PF08245 Mur ligase middle domain 108 277 6.5E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Gene3D G3DSA:3.40.50.720 1 90 7.0E-18 T 14-10-2018 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Gene3D G3DSA:3.40.1190.10 93 294 6.7E-50 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_2316 f1a44a477156b1a2c227630c15734d1d 443 Gene3D G3DSA:3.90.190.20 295 440 4.5E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_1716 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_1716 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF00665 Integrase core domain 92 206 4.0E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1716 87a1f5a63be8d3b43b55105c0f86dfd8 253 Gene3D G3DSA:3.30.420.10 89 239 6.2E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1716 87a1f5a63be8d3b43b55105c0f86dfd8 253 SUPERFAMILY SSF53098 87 250 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0613 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_0613 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF00665 Integrase core domain 92 206 4.0E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0613 87a1f5a63be8d3b43b55105c0f86dfd8 253 Gene3D G3DSA:3.30.420.10 89 239 6.2E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0613 87a1f5a63be8d3b43b55105c0f86dfd8 253 SUPERFAMILY SSF53098 87 250 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1565 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_1565 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF00665 Integrase core domain 92 206 4.0E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1565 87a1f5a63be8d3b43b55105c0f86dfd8 253 Gene3D G3DSA:3.30.420.10 89 239 6.2E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1565 87a1f5a63be8d3b43b55105c0f86dfd8 253 SUPERFAMILY SSF53098 87 250 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0652 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_0652 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF00665 Integrase core domain 92 206 4.0E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0652 87a1f5a63be8d3b43b55105c0f86dfd8 253 Gene3D G3DSA:3.30.420.10 89 239 6.2E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0652 87a1f5a63be8d3b43b55105c0f86dfd8 253 SUPERFAMILY SSF53098 87 250 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1893 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_1893 87a1f5a63be8d3b43b55105c0f86dfd8 253 Pfam PF00665 Integrase core domain 92 206 4.0E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1893 87a1f5a63be8d3b43b55105c0f86dfd8 253 Gene3D G3DSA:3.30.420.10 89 239 6.2E-18 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1893 87a1f5a63be8d3b43b55105c0f86dfd8 253 SUPERFAMILY SSF53098 87 250 1.26E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 SUPERFAMILY SSF50249 1 112 2.11E-35 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 107 8.1E-28 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 Pfam PF00436 Single-strand binding protein family 1 95 2.4E-31 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 Gene3D G3DSA:2.40.50.140 1 109 8.5E-37 T 14-10-2018 llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 Hamap MF_00984 Single-stranded DNA-binding protein. 1 106 28.232 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_0409 3e863513c37c2a038b6bb97890eaa62a 129 PIRSF PIRSF002070 1 119 2.5E-30 T 14-10-2018 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Gene3D G3DSA:3.30.70.980 127 203 2.8E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.931 T 14-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.007 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 SUPERFAMILY SSF75625 1 235 2.75E-77 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Gene3D G3DSA:1.10.10.200 2 79 1.6E-22 T 14-10-2018 IPR017856 Integrase-like, N-terminal llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 9.2E-65 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Gene3D G3DSA:3.30.70.980 84 234 2.8E-45 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0242 b0c579c4000172c915993be6c1d5aba2 238 Pfam PF01709 Transcriptional regulator 4 235 1.2E-77 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 SUPERFAMILY SSF51246 321 412 7.85E-20 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 SUPERFAMILY SSF52440 1 102 2.73E-31 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 412 41.082 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 283 290 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 3.5E-33 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 SMART SM01210 322 412 1.6E-25 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Gene3D G3DSA:3.40.50.20 2 94 1.3E-30 T 14-10-2018 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Gene3D G3DSA:3.30.470.20 185 320 1.7E-53 T 14-10-2018 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 324 409 1.6E-18 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 412 1.5E-142 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 289 7.8E-71 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 SUPERFAMILY SSF56059 103 312 1.26E-59 T 14-10-2018 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Gene3D G3DSA:3.90.600.10 322 413 1.1E-19 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 SMART SM01209 102 289 2.0E-120 T 14-10-2018 llmg_0997 b96c7b694c491d08b67602ff5d7d228b 413 Gene3D G3DSA:3.30.1490.20 120 184 2.3E-20 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 llmg_0030 d2ea19089b0291def99885674ec8b78e 542 SMART SM00885 105 228 1.8E-27 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_0030 d2ea19089b0291def99885674ec8b78e 542 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 178 480 1.8E-88 T 14-10-2018 IPR006500 DNA primase, phage/plasmid llmg_0030 d2ea19089b0291def99885674ec8b78e 542 Pfam PF03288 Poxvirus D5 protein-like 434 513 3.9E-16 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal llmg_0030 d2ea19089b0291def99885674ec8b78e 542 Pfam PF08706 D5 N terminal like 107 223 3.0E-8 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_0030 d2ea19089b0291def99885674ec8b78e 542 Gene3D G3DSA:3.40.50.300 226 409 2.6E-10 T 14-10-2018 llmg_0030 d2ea19089b0291def99885674ec8b78e 542 SUPERFAMILY SSF52540 218 414 7.43E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 SUPERFAMILY SSF50447 256 382 3.53E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 521 48.923 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 182 5.1E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 518 1.4E-195 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Gene3D G3DSA:3.40.50.300 69 375 1.1E-102 T 14-10-2018 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 508 1.5E-42 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Gene3D G3DSA:3.30.70.3280 387 522 1.5E-46 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Pfam PF00009 Elongation factor Tu GTP binding domain 9 272 4.6E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.7E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.7E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.7E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.7E-11 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Gene3D G3DSA:3.40.50.300 107 270 1.1E-102 T 14-10-2018 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 Pfam PF03144 Elongation factor Tu domain 2 310 376 1.1E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 SUPERFAMILY SSF52540 6 272 2.94E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site llmg_0368 dfdc5f8d598cea2d7537bf4900bc6301 523 SUPERFAMILY SSF54980 390 462 3.96E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_2372 67da68ff21e2b349ad31534206398a5b 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 99 3.4E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2372 67da68ff21e2b349ad31534206398a5b 101 Gene3D G3DSA:2.30.30.30 1 99 2.2E-33 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 llmg_2372 67da68ff21e2b349ad31534206398a5b 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2372 67da68ff21e2b349ad31534206398a5b 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 94 20.099 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2372 67da68ff21e2b349ad31534206398a5b 101 Pfam PF00467 KOW motif 6 36 7.9E-8 T 14-10-2018 IPR005824 KOW llmg_2372 67da68ff21e2b349ad31534206398a5b 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 100 4.1E-34 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2372 67da68ff21e2b349ad31534206398a5b 101 SMART SM00739 2 29 3.5E-5 T 14-10-2018 IPR005824 KOW llmg_2372 67da68ff21e2b349ad31534206398a5b 101 SUPERFAMILY SSF50104 2 99 3.28E-30 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily llmg_2379 9179e447bbccbcfc069ef619f2917515 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.1E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 SUPERFAMILY SSF54570 3 84 1.7E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.4E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.385 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 PIRSF PIRSF002144 1 92 3.5E-32 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2379 9179e447bbccbcfc069ef619f2917515 92 Gene3D G3DSA:3.30.860.10 1 92 5.9E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1581 60077b5ee5dac636a6418d659fb70594 445 Pfam PF05167 Uncharacterised ACR (DUF711) 12 409 3.6E-168 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 llmg_1581 60077b5ee5dac636a6418d659fb70594 445 Gene3D G3DSA:3.20.70.20 1 445 1.4E-183 T 14-10-2018 llmg_1581 60077b5ee5dac636a6418d659fb70594 445 SUPERFAMILY SSF51998 1 440 4.58E-175 T 14-10-2018 llmg_1581 60077b5ee5dac636a6418d659fb70594 445 Hamap MF_01221 UPF0210 protein . 1 445 52.204 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:3.30.56.10 4 188 7.5E-61 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 791 43.61 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Pfam PF03147 Ferredoxin-fold anticodon binding domain 704 797 1.5E-29 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 797 1.3E-256 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Pfam PF01588 Putative tRNA binding domain 46 151 9.0E-19 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Pfam PF03484 tRNA synthetase B5 domain 412 477 2.6E-18 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Pfam PF03483 B3/4 domain 220 392 1.0E-60 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SMART SM00896 704 797 2.9E-42 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:3.30.70.380 705 797 3.1E-28 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SMART SM00873 219 392 3.9E-80 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SMART SM00874 409 477 6.5E-27 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SUPERFAMILY SSF50249 40 197 3.43E-39 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:3.50.40.10 203 403 5.7E-75 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:2.40.50.140 40 165 7.5E-61 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SUPERFAMILY SSF55681 473 691 3.98E-45 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:3.30.930.10 492 692 6.0E-50 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 Gene3D G3DSA:3.30.56.10 408 481 3.3E-25 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SUPERFAMILY SSF54991 700 797 3.79E-30 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SUPERFAMILY SSF56037 211 403 1.12E-65 T 14-10-2018 llmg_2195 5c5db4414b2149aeb543c18c9d4657ac 797 SUPERFAMILY SSF46955 411 481 1.37E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 911 1231 1.1E-47 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 SUPERFAMILY SSF53067 321 575 4.98E-53 T 14-10-2018 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Gene3D G3DSA:3.30.420.40 322 575 7.5E-82 T 14-10-2018 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Gene3D G3DSA:3.30.420.40 98 243 4.7E-70 T 14-10-2018 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Gene3D G3DSA:3.30.420.40 8 257 4.7E-70 T 14-10-2018 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 322 575 2.1E-37 T 14-10-2018 IPR008275 CoA enzyme activase llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 677 897 9.6E-76 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 8 257 7.8E-22 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 322 575 2.3E-34 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 SUPERFAMILY SSF53067 5 257 2.35E-54 T 14-10-2018 llmg_2516 f86473d39892fcb8938c8e5e53105add 1436 Gene3D G3DSA:3.30.420.40 416 559 7.5E-82 T 14-10-2018 llmg_1149 5f959aa3a11cc9268c55a626231a29d7 318 PIRSF PIRSF001439 3 318 5.0E-93 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 llmg_1149 5f959aa3a11cc9268c55a626231a29d7 318 SUPERFAMILY SSF51735 1 317 1.6E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1149 5f959aa3a11cc9268c55a626231a29d7 318 Gene3D G3DSA:3.40.50.720 126 301 5.0E-94 T 14-10-2018 llmg_1149 5f959aa3a11cc9268c55a626231a29d7 318 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 7 317 1.8E-83 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 llmg_1149 5f959aa3a11cc9268c55a626231a29d7 318 Gene3D G3DSA:3.30.1780.10 6 316 5.0E-94 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 SUPERFAMILY SSF55186 63 240 6.28E-61 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Gene3D G3DSA:3.10.20.30 1 63 1.6E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Gene3D G3DSA:3.30.930.10 224 538 4.4E-112 T 14-10-2018 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Gene3D G3DSA:3.40.50.800 539 644 2.1E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 SMART SM00863 169 218 3.9E-23 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 6.8E-45 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 6.8E-45 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 6.8E-45 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 6.8E-45 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 6.8E-45 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Gene3D G3DSA:3.30.980.10 70 221 6.5E-60 T 14-10-2018 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 535 2.4E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 SUPERFAMILY SSF55681 242 532 7.96E-94 T 14-10-2018 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Pfam PF03129 Anticodon binding domain 547 637 5.8E-25 T 14-10-2018 IPR004154 Anticodon-binding llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 1.2E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 638 4.0E-218 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 SUPERFAMILY SSF52954 535 640 4.53E-32 T 14-10-2018 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 641 32.908 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Gene3D G3DSA:3.30.54.20 131 186 6.5E-60 T 14-10-2018 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 SUPERFAMILY SSF81271 2 61 5.01E-17 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 llmg_2169 49740bcc0ae861b0dfebca9c8e0d5f02 646 Pfam PF02824 TGS domain 2 61 1.1E-11 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 367 436 1.5E-25 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 SUPERFAMILY SSF102741 364 437 3.14E-24 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 336 9.4E-137 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Gene3D G3DSA:2.70.210.12 3 159 1.1E-55 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 SUPERFAMILY SSF82051 4 159 5.36E-53 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Gene3D G3DSA:2.40.240.60 366 437 1.0E-16 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Gene3D G3DSA:3.40.50.300 160 350 1.1E-55 T 14-10-2018 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 184 202 2.3E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 163 183 2.3E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 229 247 2.3E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 212 227 2.3E-32 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Pfam PF01926 50S ribosome-binding GTPase 162 285 1.9E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 SUPERFAMILY SSF52540 153 340 2.3E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Pfam PF09269 Domain of unknown function (DUF1967) 367 435 1.0E-24 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Hamap MF_01454 GTPase Obg [obg]. 3 338 46.319 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 ProSitePatterns PS00905 GTP1/OBG family signature. 214 227 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 llmg_0915 f01487ee8fdbbcf73cd673d4d3c12a27 437 Pfam PF01018 GTP1/OBG 6 158 3.3E-57 T 14-10-2018 IPR006169 GTP1/OBG domain llmg_0615 f0106c7b194864c3421726af26226160 816 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 144 2.8E-10 T 14-10-2018 IPR004176 Clp, N-terminal llmg_0615 f0106c7b194864c3421726af26226160 816 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 19 69 1.6E-7 T 14-10-2018 IPR004176 Clp, N-terminal llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:3.40.50.300 174 362 9.2E-64 T 14-10-2018 llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:3.40.50.300 475 722 1.5E-93 T 14-10-2018 llmg_0615 f0106c7b194864c3421726af26226160 816 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 550 568 7.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 624 642 7.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 671 7.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 613 7.3E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 SUPERFAMILY SSF52540 495 796 6.51E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0615 f0106c7b194864c3421726af26226160 816 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 218 334 1.0E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 SMART SM01086 723 812 8.9E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:1.10.1780.10 2 68 1.5E-8 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:1.10.1780.10 73 173 7.6E-12 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 llmg_0615 f0106c7b194864c3421726af26226160 816 SMART SM00382 213 358 7.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0615 f0106c7b194864c3421726af26226160 816 SMART SM00382 546 686 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:1.10.8.60 363 448 4.3E-27 T 14-10-2018 llmg_0615 f0106c7b194864c3421726af26226160 816 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 723 802 1.6E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0615 f0106c7b194864c3421726af26226160 816 SUPERFAMILY SSF81923 7 141 7.14E-18 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 llmg_0615 f0106c7b194864c3421726af26226160 816 SUPERFAMILY SSF52540 173 441 6.4E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0615 f0106c7b194864c3421726af26226160 816 Pfam PF07724 AAA domain (Cdc48 subfamily) 545 716 9.0E-54 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0615 f0106c7b194864c3421726af26226160 816 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 580 598 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 llmg_0615 f0106c7b194864c3421726af26226160 816 Gene3D G3DSA:1.10.8.60 723 815 2.5E-26 T 14-10-2018 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Pfam PF15979 Glycosyl hydrolase family 115 150 496 2.5E-133 T 14-10-2018 IPR031924 Glycosyl hydrolase family 115 llmg_1014 f851112248231277af8a0cd579de6fa6 796 SUPERFAMILY SSF55545 7 126 1.44E-12 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Pfam PF03648 Glycosyl hydrolase family 67 N-terminus 30 117 1.1E-5 T 14-10-2018 IPR005154 Alpha glucuronidase, N-terminal GO:0045493|GO:0046559 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Gene3D G3DSA:3.30.379.10 3 152 3.0E-29 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Gene3D G3DSA:2.60.120.1620 630 795 2.4E-25 T 14-10-2018 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Gene3D G3DSA:1.20.58.2150 455 629 1.0E-50 T 14-10-2018 llmg_1014 f851112248231277af8a0cd579de6fa6 796 Gene3D G3DSA:3.20.20.520 154 454 6.7E-123 T 14-10-2018 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 SUPERFAMILY SSF52943 3 289 6.54E-87 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 289 33.155 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 275 288 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 289 2.4E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 Gene3D G3DSA:3.40.1380.10 63 208 4.6E-93 T 14-10-2018 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 PRINTS PR00126 ATP synthase gamma subunit signature 236 255 1.9E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.9E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 PRINTS PR00126 ATP synthase gamma subunit signature 267 288 1.9E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 PRINTS PR00126 ATP synthase gamma subunit signature 168 185 1.9E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 Pfam PF00231 ATP synthase 4 289 6.6E-89 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1947 dd2a77f1cb7827138439f731e7924995 289 Gene3D G3DSA:1.10.287.80 7 285 4.6E-93 T 14-10-2018 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 Pfam PF02609 Exonuclease VII small subunit 10 59 3.7E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 14.494 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 63 1.5E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 10 51 1.0E-16 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 SUPERFAMILY SSF116842 3 72 8.11E-19 T 14-10-2018 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 PIRSF PIRSF006488 1 79 2.0E-18 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 llmg_1691 f951f83b09ce6d93c64695d5de1fa3ed 79 Gene3D G3DSA:1.10.287.1040 3 78 6.0E-19 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 358 4.5E-141 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 Gene3D G3DSA:2.160.10.10 269 378 2.1E-26 T 14-10-2018 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 2 373 47.709 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 Gene3D G3DSA:3.90.550.10 3 267 1.2E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 189 199 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 SUPERFAMILY SSF53448 3 356 2.2E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 Pfam PF00483 Nucleotidyl transferase 7 257 6.0E-68 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 SUPERFAMILY SSF51161 292 363 1.35E-18 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 327 359 1.9E-6 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_1874 301089b95479e9d4f800a5a0e5ab3c06 380 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 11 30 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 Gene3D G3DSA:1.10.1660.10 8 121 8.9E-26 T 14-10-2018 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 1.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 42 62 1.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 1.4E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 SUPERFAMILY SSF46955 8 111 3.33E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 SMART SM00422 8 75 7.9E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0301 1329a6dac67892e121f69644bf39bb0d 122 Pfam PF13411 MerR HTH family regulatory protein 8 73 3.6E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2527 b4452a5572ed0aee7f67f852f3c5feb9 230 SMART SM01040 15 109 9.0E-12 T 14-10-2018 IPR003497 BRO N-terminal domain llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Gene3D G3DSA:3.40.710.10 395 711 8.3E-132 T 14-10-2018 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 SUPERFAMILY SSF53955 105 327 8.15E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Pfam PF00912 Transglycosylase 114 287 2.9E-48 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Gene3D G3DSA:1.10.20.80 338 600 8.3E-132 T 14-10-2018 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Gene3D G3DSA:2.10.10.60 729 802 6.2E-19 T 14-10-2018 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Pfam PF00905 Penicillin binding protein transpeptidase domain 425 661 6.0E-18 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 Gene3D G3DSA:1.10.3810.10 119 324 3.4E-54 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0402 2d639727a1f33f97163cbfedec46e210 812 SUPERFAMILY SSF56601 287 747 1.31E-84 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 SMART SM01232 132 224 1.9E-38 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 SMART SM00898 2 116 2.4E-47 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Gene3D G3DSA:1.10.8.50 134 272 6.7E-54 T 14-10-2018 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Gene3D G3DSA:3.20.190.10 1 133 5.4E-50 T 14-10-2018 IPR035937 MutM-like, N-terminal llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 SUPERFAMILY SSF57716 223 270 1.87E-15 T 14-10-2018 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 270 2.8E-110 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 SUPERFAMILY SSF46946 132 221 5.89E-28 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 270 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Pfam PF06827 Zinc finger found in FPG and IleRS 243 271 6.2E-12 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 SUPERFAMILY SSF81624 2 141 4.71E-40 T 14-10-2018 IPR035937 MutM-like, N-terminal llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 115 4.6E-30 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 271 42.587 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 llmg_0373 0e8e7f7d0a457462397f0c529c14be88 272 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 222 1.5E-32 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 SMART SM00387 384 496 8.0E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 Gene3D G3DSA:3.30.565.10 345 496 1.2E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 SMART SM00388 272 339 1.2E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 494 4.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 SUPERFAMILY SSF47384 255 338 2.55E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 Gene3D G3DSA:1.10.287.130 221 340 9.8E-25 T 14-10-2018 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 450 6.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 6.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 494 6.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 475 6.6E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 SMART SM00304 217 271 3.8E-6 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 Pfam PF00512 His Kinase A (phospho-acceptor) domain 273 338 2.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 Pfam PF00672 HAMP domain 219 263 6.7E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 llmg_0909 42bc69332e59fc5c4d549c08e49c2515 496 SUPERFAMILY SSF55874 329 495 6.94E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_2003 8ca18f40b5cce8621d78221a2645027f 189 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 81 1.4E-7 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 llmg_2003 8ca18f40b5cce8621d78221a2645027f 189 Gene3D G3DSA:3.40.50.720 1 189 1.6E-20 T 14-10-2018 llmg_2003 8ca18f40b5cce8621d78221a2645027f 189 SUPERFAMILY SSF51735 1 188 2.0E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 Pfam PF00122 E1-E2 ATPase 128 287 4.0E-44 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 307 321 1.6E-20 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 165 179 1.6E-20 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 459 1.6E-20 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 502 521 1.6E-20 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 525 537 1.6E-20 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 SUPERFAMILY SSF56784 306 608 1.01E-47 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 52 611 4.6E-126 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 Pfam PF00702 haloacid dehalogenase-like hydrolase 303 516 8.6E-35 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 Gene3D G3DSA:3.40.1110.10 318 433 5.3E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 68 611 1.1E-161 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 Gene3D G3DSA:3.40.50.1000 288 554 5.3E-84 T 14-10-2018 IPR023214 HAD superfamily llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 SUPERFAMILY SSF81665 73 579 3.92E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 Gene3D G3DSA:2.70.150.20 102 219 2.2E-29 T 14-10-2018 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 579 6.1E-75 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 309 315 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1561 94d5d3983d50905e8b76ce20f10ce9b8 620 SUPERFAMILY SSF81653 130 215 4.32E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_2492 85fcbefdc156a272fd8944c37416b75f 115 Gene3D G3DSA:1.20.1500.10 2 114 1.9E-21 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily llmg_2492 85fcbefdc156a272fd8944c37416b75f 115 SUPERFAMILY SSF158622 2 109 1.7E-23 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily llmg_2492 85fcbefdc156a272fd8944c37416b75f 115 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 108 7.1E-16 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA llmg_2492 85fcbefdc156a272fd8944c37416b75f 115 PIRSF PIRSF021287 1 115 1.0E-36 T 14-10-2018 IPR016783 Biofilm formation YmcA llmg_2324 cb7a8d937a28543700468e14a5cf580a 110 Pfam PF08818 Domain of unknown function (DU1801) 12 87 1.3E-7 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 llmg_2324 cb7a8d937a28543700468e14a5cf580a 110 Gene3D G3DSA:1.10.10.810 1 108 2.7E-16 T 14-10-2018 llmg_2324 cb7a8d937a28543700468e14a5cf580a 110 SUPERFAMILY SSF159888 2 106 1.27E-21 T 14-10-2018 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 SUPERFAMILY SSF55681 7 285 9.44E-122 T 14-10-2018 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 Gene3D G3DSA:3.30.930.10 1 209 2.7E-101 T 14-10-2018 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 293 6.5E-143 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 8 284 3.1E-138 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 112 136 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 60 75 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 81 101 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 161 176 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 246 262 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 138 158 5.9E-61 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 6 286 54.303 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1478 74e9e4384d16e01f387d1f88a938efe8 317 Gene3D G3DSA:1.20.58.180 210 291 1.9E-32 T 14-10-2018 llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 Gene3D G3DSA:1.10.10.10 2 151 3.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 SUPERFAMILY SSF46785 18 141 2.77E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 Pfam PF01047 MarR family 43 95 1.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 2.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 2.3E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0424 c4a9c01886e8dbe4f14cb0759231d394 166 SMART SM00347 32 131 1.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Gene3D G3DSA:1.10.274.10 24 148 1.1E-73 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 SUPERFAMILY SSF47831 24 145 4.71E-33 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 451 469 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 SUPERFAMILY SSF51621 251 552 1.05E-109 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 571 4.8E-225 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Gene3D G3DSA:3.50.30.10 7 236 1.1E-73 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Gene3D G3DSA:3.20.20.60 238 575 2.5E-120 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 SUPERFAMILY SSF52009 127 243 1.7E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 504 516 3.7E-32 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 3.7E-32 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 451 466 3.7E-32 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 468 483 3.7E-32 T 14-10-2018 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 PIRSF PIRSF000732 1 575 2.3E-210 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 9.4E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 4.2E-30 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 llmg_0127 bc43a7006373f74cf2567ae85571b9d9 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 545 7.0E-127 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 Gene3D G3DSA:1.10.150.170 117 221 2.8E-100 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 9 315 37.132 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 SUPERFAMILY SSF81799 119 220 1.09E-34 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 7 314 1.4E-117 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 SUPERFAMILY SSF53335 9 314 1.48E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 PIRSF PIRSF004486 3 316 5.3E-106 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 Gene3D G3DSA:3.40.50.150 9 312 2.8E-100 T 14-10-2018 llmg_1681 4e7d8f9e286828430cb5f1d80e5a4ef9 317 Pfam PF01795 MraW methylase family 7 314 1.5E-128 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Gene3D G3DSA:3.10.350.10 254 307 3.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Gene3D G3DSA:3.10.350.10 178 253 3.1E-16 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Gene3D G3DSA:3.10.350.10 308 361 3.0E-13 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Gene3D G3DSA:4.10.80.30 79 103 1.9E-37 T 14-10-2018 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 35 164 5.4E-19 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SMART SM00257 318 361 5.0E-8 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SMART SM00257 258 303 3.1E-13 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SMART SM00257 194 238 1.9E-13 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SMART SM00047 15 170 5.3E-36 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SUPERFAMILY SSF54106 318 361 2.22E-9 T 14-10-2018 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Pfam PF01476 LysM domain 259 302 3.6E-13 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Pfam PF01476 LysM domain 319 361 3.4E-11 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Pfam PF01476 LysM domain 195 236 1.7E-11 T 14-10-2018 IPR018392 LysM domain llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SUPERFAMILY SSF54106 194 237 6.8E-9 T 14-10-2018 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 Gene3D G3DSA:1.10.530.10 29 170 1.9E-37 T 14-10-2018 llmg_0509 003cc2453a4e8e371cb6704270790d6f 361 SUPERFAMILY SSF54106 257 303 6.15E-11 T 14-10-2018 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 351 4.8E-96 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 142 8.1E-49 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 SUPERFAMILY SSF53756 1 355 1.51E-102 T 14-10-2018 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 Gene3D G3DSA:3.40.50.2000 4 346 1.9E-104 T 14-10-2018 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 356 33.61 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 182 348 1.7E-39 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 llmg_0913 24e99e19cfe0862fd3f320cdce2565a2 357 Gene3D G3DSA:3.40.50.2000 164 340 1.9E-104 T 14-10-2018 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 7 360 2.8E-124 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 Pfam PF13394 4Fe-4S single cluster domain 118 217 2.2E-6 T 14-10-2018 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 PIRSF PIRSF006004 4 365 4.1E-128 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 Pfam PF04055 Radical SAM superfamily 113 280 9.4E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 SUPERFAMILY SSF102114 106 317 4.05E-15 T 14-10-2018 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 10 358 68.02 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 Gene3D G3DSA:3.20.20.70 74 343 3.4E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0194 5ce4972a8a914f7a46c468bad89c1834 365 Gene3D G3DSA:1.10.150.530 10 70 4.3E-19 T 14-10-2018 llmg_0031 7d2d229c422cd6eea8b7af2a637e2443 264 SMART SM00943 7 175 2.3E-31 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_0031 7d2d229c422cd6eea8b7af2a637e2443 264 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 7 174 1.6E-19 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_0031 7d2d229c422cd6eea8b7af2a637e2443 264 Pfam PF08708 Primase C terminal 1 (PriCT-1) 203 262 8.0E-11 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_0031 7d2d229c422cd6eea8b7af2a637e2443 264 SMART SM00942 201 264 4.4E-20 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_0031 7d2d229c422cd6eea8b7af2a637e2443 264 SUPERFAMILY SSF56747 5 187 7.85E-10 T 14-10-2018 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 Gene3D G3DSA:3.40.50.300 5 225 2.9E-68 T 14-10-2018 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 Pfam PF08402 TOBE domain 276 344 2.1E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 Gene3D G3DSA:2.40.50.140 283 337 7.2E-10 T 14-10-2018 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 SUPERFAMILY SSF52540 5 248 4.62E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1328 329f3c4183678fc8c41773071518d6c9 426 SUPERFAMILY SSF50331 240 345 4.42E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal llmg_1328 329f3c4183678fc8c41773071518d6c9 426 Pfam PF00005 ABC transporter 23 164 8.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1328 329f3c4183678fc8c41773071518d6c9 426 SMART SM00382 32 215 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1328 329f3c4183678fc8c41773071518d6c9 426 Gene3D G3DSA:2.40.50.940 226 344 7.2E-10 T 14-10-2018 llmg_0621 98e6bbd00ff476630a3ae2c48e53d35e 279 Pfam PF00665 Integrase core domain 118 233 6.3E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0621 98e6bbd00ff476630a3ae2c48e53d35e 279 Gene3D G3DSA:3.30.420.10 112 271 2.6E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0621 98e6bbd00ff476630a3ae2c48e53d35e 279 Pfam PF13276 HTH-like domain 46 96 1.5E-11 T 14-10-2018 IPR025948 HTH-like domain llmg_0621 98e6bbd00ff476630a3ae2c48e53d35e 279 SUPERFAMILY SSF53098 115 277 2.02E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1144 98e6bbd00ff476630a3ae2c48e53d35e 279 Pfam PF00665 Integrase core domain 118 233 6.3E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1144 98e6bbd00ff476630a3ae2c48e53d35e 279 Gene3D G3DSA:3.30.420.10 112 271 2.6E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1144 98e6bbd00ff476630a3ae2c48e53d35e 279 Pfam PF13276 HTH-like domain 46 96 1.5E-11 T 14-10-2018 IPR025948 HTH-like domain llmg_1144 98e6bbd00ff476630a3ae2c48e53d35e 279 SUPERFAMILY SSF53098 115 277 2.02E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 145 5.1E-46 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 314 44.61 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.6E-48 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 1.6E-48 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.6E-48 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 1.6E-48 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 1.6E-48 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 SUPERFAMILY SSF56327 146 313 1.11E-54 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 Gene3D G3DSA:3.90.110.10 148 323 1.1E-62 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 SUPERFAMILY SSF51735 3 147 5.02E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 PIRSF PIRSF000102 3 321 2.0E-103 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 307 3.1E-123 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 316 1.3E-44 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 llmg_1120 29343d264e6a299900306dbb1ea2a36c 325 Gene3D G3DSA:3.40.50.720 1 147 5.4E-58 T 14-10-2018 llmg_1908 8b0cae37efc7f0397f8cd89e826981be 230 Gene3D G3DSA:3.40.50.150 16 229 9.1E-55 T 14-10-2018 llmg_1908 8b0cae37efc7f0397f8cd89e826981be 230 SUPERFAMILY SSF53335 1 224 1.1E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1908 8b0cae37efc7f0397f8cd89e826981be 230 Pfam PF01596 O-methyltransferase 36 226 8.7E-34 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 llmg_2026 d89c5031121666c1b496123764d6eada 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 317 7.7E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2026 d89c5031121666c1b496123764d6eada 319 SUPERFAMILY SSF161098 92 300 1.83E-18 T 14-10-2018 IPR035906 MetI-like superfamily llmg_2026 d89c5031121666c1b496123764d6eada 319 Gene3D G3DSA:1.10.3720.10 84 312 4.2E-21 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 SUPERFAMILY SSF55021 274 362 1.06E-19 T 14-10-2018 llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 Gene3D G3DSA:3.40.50.300 2 268 2.2E-70 T 14-10-2018 llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 SMART SM00930 285 360 6.2E-23 T 14-10-2018 IPR018449 NIL domain llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 Pfam PF00005 ABC transporter 24 187 2.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 SMART SM00382 33 237 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 SUPERFAMILY SSF52540 4 259 1.23E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 Gene3D G3DSA:3.30.70.260 272 367 7.9E-23 T 14-10-2018 llmg_0341 b316a73a67067fca17ad4cdbca43e82b 368 Pfam PF09383 NIL domain 288 359 1.3E-18 T 14-10-2018 IPR018449 NIL domain llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 SUPERFAMILY SSF51905 52 497 9.23E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 Gene3D G3DSA:3.90.700.10 292 436 9.0E-156 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 444 466 8.0E-6 T 14-10-2018 llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 61 80 8.0E-6 T 14-10-2018 llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 Pfam PF00890 FAD binding domain 60 480 5.0E-92 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 Gene3D G3DSA:3.50.50.60 59 491 9.0E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 SUPERFAMILY SSF56425 292 436 3.29E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 llmg_1441 49ee0db674141380eae603f4dc1c75b8 502 TIGRFAM TIGR01813 flavo_cyto_c: flavocytochrome c 60 491 1.4E-158 T 14-10-2018 IPR010960 Flavocytochrome c GO:0000104|GO:0055114 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Pfam PF00270 DEAD/DEAH box helicase 19 179 4.2E-17 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SMART SM00956 403 506 6.1E-40 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Gene3D G3DSA:1.10.10.10 398 515 4.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Pfam PF00271 Helicase conserved C-terminal domain 214 322 2.0E-18 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SUPERFAMILY SSF46785 394 540 4.08E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SMART SM00487 12 209 6.9E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Gene3D G3DSA:3.40.50.300 1 200 5.5E-70 T 14-10-2018 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SMART SM00490 242 323 5.2E-28 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 589 4.7E-231 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Pfam PF09382 RQC domain 399 503 6.7E-31 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SUPERFAMILY SSF47819 517 591 2.62E-24 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Gene3D G3DSA:3.40.50.300 201 397 9.0E-56 T 14-10-2018 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Gene3D G3DSA:1.10.150.80 516 592 1.0E-23 T 14-10-2018 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 454 6.2E-135 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Pfam PF16124 RecQ zinc-binding 335 396 3.9E-15 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SMART SM00341 516 589 6.3E-11 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 Pfam PF00570 HRDC domain 520 584 4.0E-21 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 llmg_1992 c75e36e190cb228dcb4bb710e7087aef 592 SUPERFAMILY SSF52540 56 344 6.32E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 SMART SM00905 4 116 4.5E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 TIGRFAM TIGR00526 folB_dom: FolB domain 1 112 1.3E-18 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 Gene3D G3DSA:3.30.1130.10 2 116 5.6E-31 T 14-10-2018 llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 Pfam PF02152 Dihydroneopterin aldolase 4 114 1.7E-24 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 115 1.3E-24 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 llmg_1338 1424c586a921ea2b40ba74e16ad7c07e 116 SUPERFAMILY SSF55620 1 115 1.11E-25 T 14-10-2018 llmg_1880 92ee095361486b752df307083ac2473f 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 60 8.1E-21 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like llmg_1880 92ee095361486b752df307083ac2473f 185 SUPERFAMILY SSF50249 128 185 5.14E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1880 92ee095361486b752df307083ac2473f 185 SUPERFAMILY SSF50104 1 63 3.31E-16 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily llmg_1880 92ee095361486b752df307083ac2473f 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 7.8E-23 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 llmg_1880 92ee095361486b752df307083ac2473f 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 1.2E-15 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 llmg_1880 92ee095361486b752df307083ac2473f 185 Gene3D G3DSA:2.40.50.140 128 185 3.7E-23 T 14-10-2018 llmg_1880 92ee095361486b752df307083ac2473f 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 45.521 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 llmg_1880 92ee095361486b752df307083ac2473f 185 SMART SM01185 67 121 1.5E-19 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 llmg_1880 92ee095361486b752df307083ac2473f 185 TIGRFAM TIGR00038 efp: translation elongation factor P 4 185 2.7E-66 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 llmg_1880 92ee095361486b752df307083ac2473f 185 SMART SM00841 129 184 9.0E-30 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 llmg_1880 92ee095361486b752df307083ac2473f 185 Gene3D G3DSA:2.30.30.30 1 62 7.5E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 llmg_1880 92ee095361486b752df307083ac2473f 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site llmg_1880 92ee095361486b752df307083ac2473f 185 Gene3D G3DSA:2.40.50.140 64 127 3.8E-18 T 14-10-2018 llmg_1880 92ee095361486b752df307083ac2473f 185 PIRSF PIRSF005901 1 185 1.5E-60 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP llmg_1880 92ee095361486b752df307083ac2473f 185 SUPERFAMILY SSF50249 65 129 2.36E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 SUPERFAMILY SSF56322 7 428 9.03E-100 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 Pfam PF01063 Amino-transferase class IV 436 622 2.1E-12 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 Gene3D G3DSA:3.20.10.10 527 619 1.1E-11 T 14-10-2018 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 SUPERFAMILY SSF56752 435 622 3.01E-21 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 PRINTS PR00095 Anthranilate synthase component I signature 267 280 6.7E-10 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 PRINTS PR00095 Anthranilate synthase component I signature 281 294 6.7E-10 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 PRINTS PR00095 Anthranilate synthase component I signature 376 390 6.7E-10 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 PRINTS PR00095 Anthranilate synthase component I signature 361 375 6.7E-10 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 Pfam PF00425 chorismate binding enzyme 164 419 1.2E-78 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 93 422 4.4E-120 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 llmg_1154 cf0639dfdbcc404597c84d674dd8d458 628 Gene3D G3DSA:3.60.120.10 2 427 4.3E-104 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 9 460 3.7E-119 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 SUPERFAMILY SSF103473 8 452 1.7E-28 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 Pfam PF13347 MFS/sugar transport protein 11 446 4.7E-84 T 14-10-2018 llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 Gene3D G3DSA:1.20.1250.20 239 452 1.4E-6 T 14-10-2018 llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 67 92 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 llmg_2237 4655f7c4c9bcff59047780db8d322b64 462 Gene3D G3DSA:1.20.1250.20 5 221 4.0E-7 T 14-10-2018 llmg_1883 71516d9e42f476d5e65035db2be386f1 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 6 183 9.0E-50 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 llmg_1883 71516d9e42f476d5e65035db2be386f1 186 SUPERFAMILY SSF110455 5 115 2.07E-33 T 14-10-2018 llmg_1883 71516d9e42f476d5e65035db2be386f1 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 7 185 30.67 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 llmg_1883 71516d9e42f476d5e65035db2be386f1 186 Pfam PF01751 Toprim domain 9 77 3.1E-5 T 14-10-2018 IPR006171 TOPRIM domain llmg_1883 71516d9e42f476d5e65035db2be386f1 186 SMART SM00493 8 81 8.7E-8 T 14-10-2018 IPR006171 TOPRIM domain llmg_1883 71516d9e42f476d5e65035db2be386f1 186 Gene3D G3DSA:3.40.1360.20 4 117 2.1E-24 T 14-10-2018 llmg_1883 71516d9e42f476d5e65035db2be386f1 186 Pfam PF13331 Domain of unknown function (DUF4093) 96 183 2.3E-34 T 14-10-2018 IPR025156 Ribonuclease M5, C-terminal domain llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 PIRSF PIRSF002158 13 276 1.2E-96 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Gene3D G3DSA:2.40.50.140 1 114 8.8E-45 T 14-10-2018 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Gene3D G3DSA:4.10.950.10 197 275 4.1E-32 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Gene3D G3DSA:2.30.30.30 118 196 2.4E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 SMART SM01383 42 118 5.2E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 4.6E-132 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 3.2E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 SUPERFAMILY SSF50249 3 125 1.61E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 46.033 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.7E-33 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 SUPERFAMILY SSF50104 126 273 7.22E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily llmg_2380 6ee0b2ea02f02a57e90930d3a3409cbf 276 SMART SM01382 124 253 2.2E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 llmg_1174 58e10542073751550ad1f82b96b1ca9c 181 Pfam PF13508 Acetyltransferase (GNAT) domain 46 132 1.1E-8 T 14-10-2018 IPR000182 GNAT domain llmg_1174 58e10542073751550ad1f82b96b1ca9c 181 Gene3D G3DSA:3.40.630.30 2 154 1.5E-31 T 14-10-2018 llmg_1174 58e10542073751550ad1f82b96b1ca9c 181 SUPERFAMILY SSF55729 11 137 1.12E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1977 f8ed6cc7cd07523193763ce1d0bb2ab8 233 PIRSF PIRSF029008 1 233 5.5E-64 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA llmg_1977 f8ed6cc7cd07523193763ce1d0bb2ab8 233 Gene3D G3DSA:3.30.70.1950 133 233 3.1E-13 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily llmg_1977 f8ed6cc7cd07523193763ce1d0bb2ab8 233 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 230 1.6E-39 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 SUPERFAMILY SSF51735 6 191 1.56E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 11 187 6.1E-57 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 SUPERFAMILY SSF55347 178 493 2.13E-107 T 14-10-2018 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 488 3.1E-179 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 6 489 81.553 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 191 487 2.6E-107 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PIRSF PIRSF000110 1 491 1.2E-180 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 144 157 8.3E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 168 196 8.3E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 238 254 8.3E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 329 355 8.3E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 220 237 8.3E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 178 184 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 Gene3D G3DSA:3.30.360.10 177 490 2.3E-116 T 14-10-2018 llmg_2499 6d2749c061bb33e45aa60ff7f622d884 503 Gene3D G3DSA:3.40.50.720 2 176 2.2E-56 T 14-10-2018 llmg_1746 17882d93d563bbf1258f40373e280db2 269 Gene3D G3DSA:3.40.50.1000 6 265 1.7E-73 T 14-10-2018 IPR023214 HAD superfamily llmg_1746 17882d93d563bbf1258f40373e280db2 269 Gene3D G3DSA:3.30.1240.10 88 192 1.7E-73 T 14-10-2018 llmg_1746 17882d93d563bbf1258f40373e280db2 269 SUPERFAMILY SSF56784 2 268 1.05E-71 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1746 17882d93d563bbf1258f40373e280db2 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 7 18 - T 14-10-2018 llmg_1746 17882d93d563bbf1258f40373e280db2 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 7.4E-65 T 14-10-2018 llmg_1746 17882d93d563bbf1258f40373e280db2 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 264 7.1E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1746 17882d93d563bbf1258f40373e280db2 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 236 1.1E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0603 836af2a53be943ce03b8296ab76d7486 115 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 9 59 7.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0603 836af2a53be943ce03b8296ab76d7486 115 SUPERFAMILY SSF47413 1 64 4.82E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0603 836af2a53be943ce03b8296ab76d7486 115 Pfam PF06543 Lactococcus bacteriophage repressor 69 114 1.7E-25 T 14-10-2018 IPR009498 Bacteriophage 4268, Orf1, C-terminal llmg_0603 836af2a53be943ce03b8296ab76d7486 115 Gene3D G3DSA:1.10.260.40 1 63 2.3E-9 T 14-10-2018 llmg_0603 836af2a53be943ce03b8296ab76d7486 115 SMART SM00530 6 59 1.9E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 451 40.506 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 Gene3D G3DSA:2.160.10.10 252 439 3.8E-51 T 14-10-2018 llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 Pfam PF12804 MobA-like NTP transferase domain 5 129 9.0E-21 T 14-10-2018 IPR025877 MobA-like NTP transferase llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 Gene3D G3DSA:3.90.550.10 1 251 2.2E-75 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 393 427 0.0027 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 SUPERFAMILY SSF53448 4 252 2.09E-62 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 SUPERFAMILY SSF51161 253 445 4.89E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_2076 7490ce506c907ed1345d1c6af27c3f3d 458 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 5 451 1.0E-172 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 llmg_0877 1b6cb418c03b5d5ba2169c09dc747a7c 1077 Gene3D G3DSA:3.80.10.10 40 402 3.2E-33 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily llmg_0877 1b6cb418c03b5d5ba2169c09dc747a7c 1077 Pfam PF13306 Leucine rich repeats (6 copies) 130 242 3.5E-18 T 14-10-2018 IPR026906 Leucine rich repeat 5 llmg_0877 1b6cb418c03b5d5ba2169c09dc747a7c 1077 Pfam PF13306 Leucine rich repeats (6 copies) 90 124 2.7E-4 T 14-10-2018 IPR026906 Leucine rich repeat 5 llmg_2480 b0fe2ded2d9d3af5c53da735c5934516 162 Gene3D G3DSA:3.30.450.40 4 160 1.6E-53 T 14-10-2018 IPR029016 GAF-like domain superfamily llmg_2480 b0fe2ded2d9d3af5c53da735c5934516 162 Pfam PF13185 GAF domain 61 149 5.1E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 llmg_2480 b0fe2ded2d9d3af5c53da735c5934516 162 SUPERFAMILY SSF55781 5 150 5.89E-36 T 14-10-2018 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 TIGRFAM TIGR01929 menB: naphthoate synthase 13 276 4.6E-127 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 Gene3D G3DSA:3.90.226.10 4 217 1.3E-71 T 14-10-2018 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 275 2.1E-78 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 SUPERFAMILY SSF52096 6 276 7.12E-79 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 118 138 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 6 279 53.94 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 llmg_1831 850604fbbba9e50efa5bcf09e46e15b7 280 Gene3D G3DSA:1.10.12.10 218 268 3.0E-26 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 SUPERFAMILY SSF51735 4 249 6.67E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 1.2E-73 T 14-10-2018 llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 6.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 6.8E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 Gene3D G3DSA:3.40.50.720 7 196 1.9E-37 T 14-10-2018 llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 Gene3D G3DSA:1.10.8.400 201 250 1.1E-10 T 14-10-2018 llmg_0539 674c02c9623c6ac451b16d2f26d967c2 250 PIRSF PIRSF000094 1 250 1.5E-94 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_2250 85eafe1b57b376762fa44bae4add919f 146 Pfam PF03592 Terminase small subunit 1 103 1.4E-32 T 14-10-2018 IPR005335 Terminase small subunit GO:0006323 llmg_2250 85eafe1b57b376762fa44bae4add919f 146 Gene3D G3DSA:1.10.10.1400 1 62 1.3E-26 T 14-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 SUPERFAMILY SSF142695 204 376 6.54E-69 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 SUPERFAMILY SSF55821 5 206 1.17E-79 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Gene3D G3DSA:3.90.870.10 2 207 3.6E-88 T 14-10-2018 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 4.4E-83 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Pfam PF00925 GTP cyclohydrolase II 208 373 2.0E-71 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 3 395 51.109 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 204 398 41.714 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Gene3D G3DSA:3.40.50.10990 208 377 2.8E-75 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 199 3.3E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 2 203 36.12 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 208 396 6.4E-81 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 llmg_1530 c2e9c5a51835eee02eefd9e035f15c5f 398 PIRSF PIRSF001259 2 398 1.2E-169 T 14-10-2018 llmg_0749 d6240572fe025415154b199130d43b2a 580 SUPERFAMILY SSF52518 2 340 3.11E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0749 d6240572fe025415154b199130d43b2a 580 Pfam PF02779 Transketolase, pyrimidine binding domain 285 437 1.6E-16 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0749 d6240572fe025415154b199130d43b2a 580 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 llmg_0749 d6240572fe025415154b199130d43b2a 580 Pfam PF02780 Transketolase, C-terminal domain 456 569 1.6E-17 T 14-10-2018 IPR033248 Transketolase, C-terminal domain llmg_0749 d6240572fe025415154b199130d43b2a 580 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 195 2.7E-76 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 llmg_0749 d6240572fe025415154b199130d43b2a 580 SMART SM00861 274 442 2.5E-24 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0749 d6240572fe025415154b199130d43b2a 580 Gene3D G3DSA:3.40.50.970 1 251 1.2E-69 T 14-10-2018 llmg_0749 d6240572fe025415154b199130d43b2a 580 SUPERFAMILY SSF52922 455 579 6.02E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0749 d6240572fe025415154b199130d43b2a 580 Gene3D G3DSA:3.40.50.970 276 447 2.4E-37 T 14-10-2018 llmg_0749 d6240572fe025415154b199130d43b2a 580 Gene3D G3DSA:3.40.50.920 452 580 1.2E-21 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0749 d6240572fe025415154b199130d43b2a 580 SUPERFAMILY SSF52518 296 427 7.65E-16 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0356 ca1223a7c5e67d94da3f348c2f5fa18a 187 Pfam PF00578 AhpC/TSA family 4 133 1.8E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 llmg_0356 ca1223a7c5e67d94da3f348c2f5fa18a 187 Gene3D G3DSA:3.40.30.10 1 183 6.7E-57 T 14-10-2018 llmg_0356 ca1223a7c5e67d94da3f348c2f5fa18a 187 SUPERFAMILY SSF52833 1 186 4.49E-54 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0356 ca1223a7c5e67d94da3f348c2f5fa18a 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.5E-97 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 llmg_0356 ca1223a7c5e67d94da3f348c2f5fa18a 187 PIRSF PIRSF000239 1 187 3.8E-50 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 SUPERFAMILY SSF54593 157 272 1.09E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 Gene3D G3DSA:3.10.180.10 7 152 4.0E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 Gene3D G3DSA:3.10.180.10 157 275 9.2E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 119 2.3E-5 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 99 118 - T 14-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 llmg_1652 d21cb3f7f1b2d2050cd970c10ffc689d 277 SUPERFAMILY SSF54593 8 153 6.79E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.8E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Pfam PF14492 Elongation Factor G, domain II 301 374 1.1E-6 T 14-10-2018 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 184 6.1E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Gene3D G3DSA:3.40.50.300 8 194 1.2E-74 T 14-10-2018 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 SUPERFAMILY SSF50447 175 295 9.15E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Gene3D G3DSA:3.30.70.3380 377 488 1.1E-42 T 14-10-2018 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 SUPERFAMILY SSF52540 5 210 8.92E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Gene3D G3DSA:3.30.70.870 295 376 2.9E-37 T 14-10-2018 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.8E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.5E-53 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Gene3D G3DSA:2.40.30.10 195 294 9.7E-36 T 14-10-2018 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 307.146 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Pfam PF00679 Elongation factor G C-terminus 408 495 1.6E-24 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 SUPERFAMILY SSF54980 408 503 1.06E-26 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 SMART SM00838 407 495 8.3E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 9.0E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 SUPERFAMILY SSF54980 301 379 7.19E-20 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_1463 4efcedc68b3b42ef48f1dbb6c9e2ef35 607 Gene3D G3DSA:3.30.70.2570 489 563 3.3E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 7.5E-185 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 Gene3D G3DSA:1.10.300.10 100 199 1.3E-103 T 14-10-2018 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 SUPERFAMILY SSF52540 1 428 2.55E-176 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 Gene3D G3DSA:3.40.440.10 5 258 1.3E-103 T 14-10-2018 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 Pfam PF00709 Adenylosuccinate synthetase 4 421 2.3E-183 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 Gene3D G3DSA:3.90.170.10 265 430 3.9E-67 T 14-10-2018 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 SMART SM00788 3 423 7.1E-293 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2201 b76815257bc4d3eb9a18b6ff88f7026f 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 210.789 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 llmg_2431 111aebb2d1f7a9dd11fdc07b0dfa62ce 341 SUPERFAMILY SSF51004 24 340 5.75E-42 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily llmg_2431 111aebb2d1f7a9dd11fdc07b0dfa62ce 341 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 339 1.2E-114 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller llmg_2431 111aebb2d1f7a9dd11fdc07b0dfa62ce 341 Gene3D G3DSA:2.130.10.10 1 341 3.6E-118 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 llmg_0646 177c3ae0422b0c56bd3ebb17aa32e9b8 404 SUPERFAMILY SSF53448 41 318 9.15E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0646 177c3ae0422b0c56bd3ebb17aa32e9b8 404 Pfam PF13641 Glycosyltransferase like family 2 45 272 3.3E-34 T 14-10-2018 llmg_0646 177c3ae0422b0c56bd3ebb17aa32e9b8 404 Gene3D G3DSA:3.90.550.10 30 266 1.2E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0568 fbde77ba87d3a7c191e43958b24883ba 97 Gene3D G3DSA:3.30.70.100 1 97 3.8E-23 T 14-10-2018 llmg_0568 fbde77ba87d3a7c191e43958b24883ba 97 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 llmg_0568 fbde77ba87d3a7c191e43958b24883ba 97 Pfam PF00708 Acylphosphatase 4 95 2.8E-19 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 llmg_0568 fbde77ba87d3a7c191e43958b24883ba 97 SUPERFAMILY SSF54975 2 96 5.23E-21 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 llmg_1743 79274f2717aa951fa57f823f49381197 324 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 315 1.0E-23 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_1743 79274f2717aa951fa57f823f49381197 324 SMART SM01400 6 122 2.5E-75 T 14-10-2018 llmg_1743 79274f2717aa951fa57f823f49381197 324 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 7 316 3.1E-122 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_1743 79274f2717aa951fa57f823f49381197 324 Gene3D G3DSA:3.40.50.2020 9 304 7.9E-123 T 14-10-2018 llmg_1743 79274f2717aa951fa57f823f49381197 324 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 122 5.8E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_1743 79274f2717aa951fa57f823f49381197 324 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 130 145 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 llmg_1743 79274f2717aa951fa57f823f49381197 324 SUPERFAMILY SSF53271 71 307 8.02E-67 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_1743 79274f2717aa951fa57f823f49381197 324 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 316 50.149 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 llmg_1743 79274f2717aa951fa57f823f49381197 324 Gene3D G3DSA:3.40.50.2020 149 292 7.9E-123 T 14-10-2018 llmg_1533 e3dc9557433bd6e2607f06439307d0e1 301 SUPERFAMILY SSF143865 7 234 3.53E-29 T 14-10-2018 llmg_1533 e3dc9557433bd6e2607f06439307d0e1 301 SUPERFAMILY SSF144083 235 295 3.01E-12 T 14-10-2018 llmg_1533 e3dc9557433bd6e2607f06439307d0e1 301 Pfam PF01544 CorA-like Mg2+ transporter protein 8 294 1.8E-61 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 llmg_1533 e3dc9557433bd6e2607f06439307d0e1 301 Gene3D G3DSA:1.20.58.340 115 241 2.2E-11 T 14-10-2018 llmg_1533 e3dc9557433bd6e2607f06439307d0e1 301 Gene3D G3DSA:1.20.58.340 243 296 4.1E-7 T 14-10-2018 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 PIRSF PIRSF005962 3 394 2.4E-108 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 SUPERFAMILY SSF55031 188 300 9.16E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 Pfam PF07687 Peptidase dimerisation domain 185 282 4.7E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 Gene3D G3DSA:3.40.630.10 18 376 3.8E-126 T 14-10-2018 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 Gene3D G3DSA:3.30.70.360 185 299 3.8E-126 T 14-10-2018 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 Pfam PF01546 Peptidase family M20/M25/M40 76 387 9.1E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 380 3.0E-99 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_0664 5e2c3a0acc73de560a4c9926bf13528a 398 SUPERFAMILY SSF53187 6 392 2.86E-78 T 14-10-2018 llmg_0739 6e031a1c2075d983c8f0e1e6dd4d0b29 409 SUPERFAMILY SSF53850 43 387 1.46E-57 T 14-10-2018 llmg_0739 6e031a1c2075d983c8f0e1e6dd4d0b29 409 Pfam PF13416 Bacterial extracellular solute-binding protein 60 350 2.1E-36 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_0739 6e031a1c2075d983c8f0e1e6dd4d0b29 409 Gene3D G3DSA:3.40.190.10 155 384 2.7E-93 T 14-10-2018 llmg_0739 6e031a1c2075d983c8f0e1e6dd4d0b29 409 Gene3D G3DSA:3.40.190.10 66 367 2.7E-93 T 14-10-2018 llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 SUPERFAMILY SSF52540 416 661 1.08E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 Pfam PF00005 ABC transporter 441 590 3.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 Pfam PF00664 ABC transporter transmembrane region 124 371 7.5E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 SMART SM00382 450 636 6.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 Gene3D G3DSA:1.20.1560.10 122 411 5.8E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 SUPERFAMILY SSF90123 18 412 3.92E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0325 2e357bd2fcffd46dba2b39049de51ee2 664 Gene3D G3DSA:3.40.50.300 417 662 1.2E-82 T 14-10-2018 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 118 23.312 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 106 1.5E-18 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 Gene3D G3DSA:3.90.470.20 1 119 7.2E-36 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 118 5.5E-28 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 95 1.0E-44 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 118 4.9E-24 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 llmg_1705 a657896adad2da308edb1bf32fcbb7ff 119 SUPERFAMILY SSF56214 1 118 1.83E-30 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 llmg_1636 0f60aefc83baff1eb622b47ab2805b37 299 SUPERFAMILY SSF103481 202 296 1.44E-12 T 14-10-2018 llmg_1636 0f60aefc83baff1eb622b47ab2805b37 299 Pfam PF00892 EamA-like transporter family 163 294 3.1E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 llmg_1636 0f60aefc83baff1eb622b47ab2805b37 299 Pfam PF00892 EamA-like transporter family 9 149 3.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 llmg_1636 0f60aefc83baff1eb622b47ab2805b37 299 SUPERFAMILY SSF103481 46 151 3.27E-11 T 14-10-2018 llmg_2420 4d21362467084f0aa9f32a07ca454e6a 332 SUPERFAMILY SSF53756 3 328 3.98E-46 T 14-10-2018 llmg_2420 4d21362467084f0aa9f32a07ca454e6a 332 Pfam PF13439 Glycosyltransferase Family 4 43 139 9.4E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 llmg_2420 4d21362467084f0aa9f32a07ca454e6a 332 Gene3D G3DSA:3.40.50.2000 150 324 4.6E-15 T 14-10-2018 llmg_2420 4d21362467084f0aa9f32a07ca454e6a 332 Pfam PF00534 Glycosyl transferases group 1 155 274 2.5E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 llmg_2420 4d21362467084f0aa9f32a07ca454e6a 332 Gene3D G3DSA:3.40.50.2000 38 149 1.3E-10 T 14-10-2018 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 Gene3D G3DSA:2.30.22.10 124 179 5.8E-20 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 Hamap MF_01151 Protein GrpE [grpE]. 2 179 18.671 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 Pfam PF01025 GrpE 21 179 6.3E-41 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 Gene3D G3DSA:3.90.20.20 3 123 1.2E-18 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 PRINTS PR00773 GrpE protein signature 130 145 8.0E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 PRINTS PR00773 GrpE protein signature 158 177 8.0E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 PRINTS PR00773 GrpE protein signature 53 69 8.0E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 PRINTS PR00773 GrpE protein signature 81 96 8.0E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 SUPERFAMILY SSF58014 31 124 5.62E-20 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 ProSitePatterns PS01071 grpE protein signature. 133 177 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 llmg_1575 113098d6bdd5e904d30d5c0cfc4f13ea 179 SUPERFAMILY SSF51064 131 179 6.15E-14 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 Gene3D G3DSA:3.10.310.20 195 314 5.7E-39 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 Pfam PF02833 DHHA2 domain 188 310 1.2E-16 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 Gene3D G3DSA:3.90.1640.10 3 194 8.6E-73 T 14-10-2018 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 SMART SM01131 186 312 5.5E-52 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 Pfam PF01368 DHH family 4 150 1.8E-21 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1996 89c76962ce9556279aec6534e7fe3fea 314 SUPERFAMILY SSF64182 3 312 3.53E-78 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily llmg_1010 84ddfe83e462a1c82d5952510d5feacb 287 SUPERFAMILY SSF161098 8 287 8.37E-60 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1010 84ddfe83e462a1c82d5952510d5feacb 287 Gene3D G3DSA:1.10.3720.10 3 278 6.7E-75 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1010 84ddfe83e462a1c82d5952510d5feacb 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 279 9.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2135 d216cb452158f7d4502e168330ed1310 82 Pfam PF01381 Helix-turn-helix 13 63 6.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2135 d216cb452158f7d4502e168330ed1310 82 SMART SM00530 10 65 1.6E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2135 d216cb452158f7d4502e168330ed1310 82 Gene3D G3DSA:1.10.260.40 7 82 9.2E-15 T 14-10-2018 llmg_2135 d216cb452158f7d4502e168330ed1310 82 SUPERFAMILY SSF47413 9 67 2.68E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_2548 3f306fa23831947464c2dd47466ab9f9 223 SMART SM00382 32 217 5.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2548 3f306fa23831947464c2dd47466ab9f9 223 Pfam PF00005 ABC transporter 23 169 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2548 3f306fa23831947464c2dd47466ab9f9 223 Gene3D G3DSA:3.40.50.300 1 223 8.3E-66 T 14-10-2018 llmg_2548 3f306fa23831947464c2dd47466ab9f9 223 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2548 3f306fa23831947464c2dd47466ab9f9 223 SUPERFAMILY SSF52540 4 220 6.35E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2298 3d58d7a2fda4a34e3f4f17ae33b30187 73 Gene3D G3DSA:1.10.287.760 1 72 3.5E-15 T 14-10-2018 IPR023164 YqgQ-like superfamily llmg_2298 3d58d7a2fda4a34e3f4f17ae33b30187 73 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 63 2.7E-23 T 14-10-2018 IPR009256 Protein of unknown function DUF910 llmg_2298 3d58d7a2fda4a34e3f4f17ae33b30187 73 SUPERFAMILY SSF158379 1 64 2.88E-16 T 14-10-2018 IPR023164 YqgQ-like superfamily llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 SUPERFAMILY SSF52518 363 546 4.88E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Gene3D G3DSA:3.40.50.970 1 183 4.7E-59 T 14-10-2018 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 SUPERFAMILY SSF52518 3 178 1.36E-45 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 534 7.8E-42 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 172 1.6E-46 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Gene3D G3DSA:3.40.50.970 360 554 5.6E-56 T 14-10-2018 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 7 545 4.0E-256 T 14-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 SUPERFAMILY SSF52467 187 352 3.49E-36 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 2.4E-27 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 llmg_1309 628f527c6de1f9ded37b9ed807dc4149 554 Gene3D G3DSA:3.40.50.1220 184 356 3.1E-36 T 14-10-2018 llmg_0939 9ae1ef1aeac8d57b9eb90a18fe200418 281 Gene3D G3DSA:3.30.1180.10 155 281 5.8E-38 T 14-10-2018 llmg_0939 9ae1ef1aeac8d57b9eb90a18fe200418 281 SUPERFAMILY SSF82549 1 278 5.23E-73 T 14-10-2018 llmg_0939 9ae1ef1aeac8d57b9eb90a18fe200418 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 279 8.6E-82 T 14-10-2018 IPR003797 DegV llmg_0939 9ae1ef1aeac8d57b9eb90a18fe200418 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 276 1.6E-77 T 14-10-2018 IPR003797 DegV llmg_0939 9ae1ef1aeac8d57b9eb90a18fe200418 281 Gene3D G3DSA:3.40.50.10170 1 152 1.0E-38 T 14-10-2018 llmg_0309 7ef008383e652e8e0a189f574b985787 341 Gene3D G3DSA:3.30.420.40 6 319 3.0E-115 T 14-10-2018 llmg_0309 7ef008383e652e8e0a189f574b985787 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 338 57.72 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 llmg_0309 7ef008383e652e8e0a189f574b985787 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 310 6.9E-101 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 Pfam PF00814 Glycoprotease family 26 310 1.1E-98 T 14-10-2018 IPR000905 Gcp-like domain llmg_0309 7ef008383e652e8e0a189f574b985787 341 SUPERFAMILY SSF53067 5 312 2.07E-35 T 14-10-2018 llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 2.3E-46 T 14-10-2018 IPR017861 Kae1/TsaD family llmg_0309 7ef008383e652e8e0a189f574b985787 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 317 8.7E-126 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 llmg_0309 7ef008383e652e8e0a189f574b985787 341 Gene3D G3DSA:3.30.420.40 131 297 3.0E-115 T 14-10-2018 llmg_2042 ae8e01093fea9d07498955084c8b9307 199 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 11 170 9.7E-70 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 llmg_2042 ae8e01093fea9d07498955084c8b9307 199 Gene3D G3DSA:2.160.10.10 71 193 3.3E-31 T 14-10-2018 llmg_2042 ae8e01093fea9d07498955084c8b9307 199 SUPERFAMILY SSF51161 12 181 1.34E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_2042 ae8e01093fea9d07498955084c8b9307 199 Gene3D G3DSA:1.10.3130.10 9 70 2.4E-19 T 14-10-2018 llmg_2042 ae8e01093fea9d07498955084c8b9307 199 PIRSF PIRSF000441 3 198 1.9E-69 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 llmg_2042 ae8e01093fea9d07498955084c8b9307 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 154 2.8E-4 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 Gene3D G3DSA:3.40.1160.10 3 288 3.5E-70 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 1.0E-78 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 Gene3D G3DSA:1.20.120.1320 39 136 3.5E-70 T 14-10-2018 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 PIRSF PIRSF000726 1 450 7.9E-74 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 Gene3D G3DSA:3.30.2130.10 290 450 4.3E-50 T 14-10-2018 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 Pfam PF00696 Amino acid kinase family 2 277 1.6E-37 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 SUPERFAMILY SSF55021 373 449 2.41E-20 T 14-10-2018 llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 Pfam PF13840 ACT domain 381 444 4.9E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 SUPERFAMILY SSF53633 2 289 7.33E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_1820 68e94c9dbff82f42844c66126e764aa5 450 SUPERFAMILY SSF55021 298 360 3.0E-8 T 14-10-2018 llmg_1833 46f1f6553edc61f40294024d936e42d7 370 SUPERFAMILY SSF51604 139 363 6.81E-51 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily llmg_1833 46f1f6553edc61f40294024d936e42d7 370 SUPERFAMILY SSF54826 1 119 1.18E-23 T 14-10-2018 llmg_1833 46f1f6553edc61f40294024d936e42d7 370 SMART SM00922 142 234 5.8E-8 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal llmg_1833 46f1f6553edc61f40294024d936e42d7 370 Gene3D G3DSA:3.30.390.10 9 114 2.1E-98 T 14-10-2018 IPR029017 Enolase-like, N-terminal llmg_1833 46f1f6553edc61f40294024d936e42d7 370 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 9 332 3.7E-151 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 llmg_1833 46f1f6553edc61f40294024d936e42d7 370 Pfam PF13378 Enolase C-terminal domain-like 147 354 1.8E-31 T 14-10-2018 IPR029065 Enolase C-terminal domain-like llmg_1833 46f1f6553edc61f40294024d936e42d7 370 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 35.392 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 llmg_1833 46f1f6553edc61f40294024d936e42d7 370 Gene3D G3DSA:3.20.20.120 115 333 2.1E-98 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily llmg_2494 da83cf1361597f1656f009774a70f03c 293 Gene3D G3DSA:3.40.50.720 1 162 7.6E-54 T 14-10-2018 llmg_2494 da83cf1361597f1656f009774a70f03c 293 SUPERFAMILY SSF51735 3 162 1.05E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2494 da83cf1361597f1656f009774a70f03c 293 Gene3D G3DSA:1.10.1040.10 163 286 4.2E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_2494 da83cf1361597f1656f009774a70f03c 293 PIRSF PIRSF000103 1 290 6.3E-73 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 llmg_2494 da83cf1361597f1656f009774a70f03c 293 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 8.5E-31 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 llmg_2494 da83cf1361597f1656f009774a70f03c 293 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 8.3E-52 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 llmg_2494 da83cf1361597f1656f009774a70f03c 293 SUPERFAMILY SSF48179 164 285 1.36E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 Gene3D G3DSA:3.40.50.620 1 174 1.1E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 394 1.6E-160 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 SUPERFAMILY SSF69864 171 397 1.29E-91 T 14-10-2018 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 Gene3D G3DSA:3.90.1260.10 175 398 6.5E-87 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 Pfam PF00764 Arginosuccinate synthase 8 391 1.1E-165 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 53.538 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 SUPERFAMILY SSF52402 1 171 1.57E-45 T 14-10-2018 llmg_0138 8dfc1626f1e31d5cbe193e02838f703d 398 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0653 e6f694b61d596dd1877ca0510c072068 50 Gene3D G3DSA:1.10.10.60 7 49 2.0E-5 T 14-10-2018 llmg_0653 e6f694b61d596dd1877ca0510c072068 50 SUPERFAMILY SSF46689 1 49 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0653 e6f694b61d596dd1877ca0510c072068 50 Pfam PF01527 Transposase 2 47 3.9E-14 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 207 54.928 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 SUPERFAMILY SSF53850 1 203 2.71E-59 T 14-10-2018 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 Pfam PF01634 ATP phosphoribosyltransferase 50 203 4.3E-48 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 Gene3D G3DSA:3.40.190.10 92 175 6.3E-69 T 14-10-2018 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 142 163 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 183 9.3E-55 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 llmg_1296 d342f134bafd2639f85a230b6bd2e4a6 208 Gene3D G3DSA:3.40.190.10 3 193 6.3E-69 T 14-10-2018 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 4.4E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 4.4E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 4.4E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 SUPERFAMILY SSF53738 152 256 1.26E-23 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 254 3.5E-13 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 95 104 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Gene3D G3DSA:3.40.120.10 3 156 3.0E-54 T 14-10-2018 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 447 4.2E-187 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 1.8E-34 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 448 43.824 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Gene3D G3DSA:3.30.310.50 371 452 6.0E-27 T 14-10-2018 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 4.6E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Gene3D G3DSA:3.40.120.10 175 363 2.0E-67 T 14-10-2018 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 SUPERFAMILY SSF53738 258 366 1.06E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 SUPERFAMILY SSF53738 3 180 3.14E-43 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 445 4.0E-17 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 SUPERFAMILY SSF55957 358 450 4.97E-25 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 llmg_0451 73f66d24e42cc3a95bc29e2d769ff7aa 452 Gene3D G3DSA:3.40.120.10 257 340 2.0E-67 T 14-10-2018 llmg_1767 77f3802a040ab150d8ef83a10ab88fb7 194 SMART SM01134 13 175 5.7E-54 T 14-10-2018 llmg_1767 77f3802a040ab150d8ef83a10ab88fb7 194 Gene3D G3DSA:3.40.50.1360 13 170 2.2E-5 T 14-10-2018 llmg_1767 77f3802a040ab150d8ef83a10ab88fb7 194 Pfam PF00455 DeoR C terminal sensor domain 15 174 1.2E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain llmg_1767 77f3802a040ab150d8ef83a10ab88fb7 194 SUPERFAMILY SSF100950 14 175 7.33E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_2227 f0314905d8f98fe2e80d3b9cd15f42eb 428 Gene3D G3DSA:3.30.830.10 233 418 1.1E-42 T 14-10-2018 llmg_2227 f0314905d8f98fe2e80d3b9cd15f42eb 428 Pfam PF05193 Peptidase M16 inactive domain 180 351 8.9E-33 T 14-10-2018 IPR007863 Peptidase M16, C-terminal llmg_2227 f0314905d8f98fe2e80d3b9cd15f42eb 428 Gene3D G3DSA:3.30.830.10 2 230 3.1E-58 T 14-10-2018 llmg_2227 f0314905d8f98fe2e80d3b9cd15f42eb 428 SUPERFAMILY SSF63411 15 212 1.21E-15 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 llmg_2227 f0314905d8f98fe2e80d3b9cd15f42eb 428 SUPERFAMILY SSF63411 235 402 8.29E-31 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 llmg_1622 1693f2ebb493642a7bb818611c3649bd 268 Pfam PF01061 ABC-2 type transporter 35 227 2.3E-13 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_0883 d83247244efbd79371c92a8514141604 80 Pfam PF08984 Domain of unknown function (DUF1858) 5 62 1.3E-18 T 14-10-2018 IPR015077 Domain of unknown function DUF1858 llmg_0883 d83247244efbd79371c92a8514141604 80 Gene3D G3DSA:1.10.3910.10 2 74 1.5E-24 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily llmg_0883 d83247244efbd79371c92a8514141604 80 SUPERFAMILY SSF140683 1 71 1.02E-19 T 14-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily llmg_1825 699c0d2827e5f88dc587e8f7d379d812 307 Pfam PF02272 DHHA1 domain 174 298 4.6E-8 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 llmg_1825 699c0d2827e5f88dc587e8f7d379d812 307 SUPERFAMILY SSF64182 11 304 7.59E-73 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily llmg_1825 699c0d2827e5f88dc587e8f7d379d812 307 Gene3D G3DSA:3.90.1640.10 1 192 7.4E-55 T 14-10-2018 llmg_1825 699c0d2827e5f88dc587e8f7d379d812 307 Pfam PF01368 DHH family 14 149 6.7E-14 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1825 699c0d2827e5f88dc587e8f7d379d812 307 Gene3D G3DSA:3.10.310.30 195 307 9.9E-33 T 14-10-2018 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 Pfam PF00664 ABC transporter transmembrane region 44 326 7.2E-55 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 SMART SM00382 419 605 6.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 ProSitePatterns PS00211 ABC transporters family signature. 531 545 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 Gene3D G3DSA:3.40.50.300 393 632 7.6E-88 T 14-10-2018 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 Gene3D G3DSA:1.20.1560.10 12 358 6.7E-94 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 SUPERFAMILY SSF52540 391 630 1.6E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 SUPERFAMILY SSF90123 32 355 7.72E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0269 57df01f067338b97bd20c56d1b0abbe4 632 Pfam PF00005 ABC transporter 411 559 6.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0661 dd528708ae7465bb9f8b0c45929ec886 316 Gene3D G3DSA:1.20.58.340 241 316 5.0E-11 T 14-10-2018 llmg_0661 dd528708ae7465bb9f8b0c45929ec886 316 SUPERFAMILY SSF144083 252 313 9.94E-13 T 14-10-2018 llmg_0661 dd528708ae7465bb9f8b0c45929ec886 316 Pfam PF01544 CorA-like Mg2+ transporter protein 32 312 2.1E-34 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 llmg_0661 dd528708ae7465bb9f8b0c45929ec886 316 SUPERFAMILY SSF143865 67 250 8.89E-8 T 14-10-2018 llmg_1360 93208d3365ca63ff6149599befb8c17a 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 21 111 2.8E-20 T 14-10-2018 IPR009241 Toxin HigB-like llmg_1348 93208d3365ca63ff6149599befb8c17a 121 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 21 111 2.8E-20 T 14-10-2018 IPR009241 Toxin HigB-like llmg_2012 290e53056e62391f3522272fd6c84bfa 305 Gene3D G3DSA:3.40.50.720 1 117 4.4E-20 T 14-10-2018 llmg_2012 290e53056e62391f3522272fd6c84bfa 305 SUPERFAMILY SSF55347 124 261 6.21E-33 T 14-10-2018 llmg_2012 290e53056e62391f3522272fd6c84bfa 305 SUPERFAMILY SSF51735 3 151 1.88E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2012 290e53056e62391f3522272fd6c84bfa 305 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 7.1E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 llmg_2012 290e53056e62391f3522272fd6c84bfa 305 Gene3D G3DSA:3.30.360.10 119 305 3.3E-43 T 14-10-2018 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 121 279 2.1E-71 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 Gene3D G3DSA:3.40.50.10860 6 273 5.5E-116 T 14-10-2018 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 31 53 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 253 271 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 152 172 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 201 230 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 236 252 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 72 99 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 107 128 7.9E-86 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 73 98 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 SUPERFAMILY SSF51735 120 278 2.87E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 280 39.464 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 Gene3D G3DSA:3.40.50.720 4 256 5.5E-116 T 14-10-2018 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 SUPERFAMILY SSF53223 2 119 1.92E-39 T 14-10-2018 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 118 7.7E-41 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_1693 3f526c839bef4de4eff0727cfe924cc4 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 257 265 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 llmg_0730 055221542ebe92e96bd1e85152ace46a 67 Gene3D G3DSA:3.30.70.20 2 67 1.1E-17 T 14-10-2018 llmg_0730 055221542ebe92e96bd1e85152ace46a 67 SUPERFAMILY SSF54862 3 64 5.35E-12 T 14-10-2018 llmg_0730 055221542ebe92e96bd1e85152ace46a 67 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 8 63 3.5E-11 T 14-10-2018 llmg_0422 7028a2081dc89331c8629e07ef7bce02 45 Pfam PF13732 Domain of unknown function (DUF4162) 1 43 1.1E-7 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 llmg_0435 d02935d055d6e1a1536ff78b27407069 248 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 73 4.9E-17 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_0435 d02935d055d6e1a1536ff78b27407069 248 SUPERFAMILY SSF46689 5 75 1.09E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0435 d02935d055d6e1a1536ff78b27407069 248 Gene3D G3DSA:3.40.50.10490 85 247 5.1E-23 T 14-10-2018 llmg_0435 d02935d055d6e1a1536ff78b27407069 248 Pfam PF01380 SIS domain 109 230 7.3E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_0435 d02935d055d6e1a1536ff78b27407069 248 Gene3D G3DSA:1.10.10.10 2 73 7.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0435 d02935d055d6e1a1536ff78b27407069 248 SUPERFAMILY SSF53697 91 234 3.56E-25 T 14-10-2018 llmg_0602 841ceeb8000e1ed4264745dc337bb8d6 124 Gene3D G3DSA:2.30.29.50 4 124 2.0E-38 T 14-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily llmg_0602 841ceeb8000e1ed4264745dc337bb8d6 124 Pfam PF08000 Bacterial PH domain 4 121 4.2E-38 T 14-10-2018 IPR012544 Bacterial Pleckstrin homology domain llmg_0602 841ceeb8000e1ed4264745dc337bb8d6 124 SUPERFAMILY SSF50729 11 124 2.99E-37 T 14-10-2018 llmg_0543 b7a88578cc19e1f8633acaa5da10a28a 178 Pfam PF02441 Flavoprotein 3 176 9.4E-43 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 llmg_0543 b7a88578cc19e1f8633acaa5da10a28a 178 TIGRFAM TIGR02113 coaC_strep: phosphopantothenoylcysteine decarboxylase 3 177 1.1E-98 T 14-10-2018 IPR011847 Phosphopantothenoylcysteine decarboxylase KEGG: 00770+4.1.1.36|MetaCyc: PWY-7851 llmg_0543 b7a88578cc19e1f8633acaa5da10a28a 178 SUPERFAMILY SSF52507 3 174 1.31E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 llmg_0543 b7a88578cc19e1f8633acaa5da10a28a 178 Gene3D G3DSA:3.40.50.1950 1 178 7.7E-54 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 Gene3D G3DSA:3.40.640.10 140 360 5.3E-52 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 Gene3D G3DSA:3.90.1150.10 133 462 5.3E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 Gene3D G3DSA:1.10.10.10 19 88 2.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 SMART SM00345 28 87 6.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 Pfam PF00155 Aminotransferase class I and II 139 456 7.9E-22 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 SUPERFAMILY SSF46785 22 91 1.13E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 SUPERFAMILY SSF53383 82 467 1.81E-58 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1151 a2d5a9158bef0348493fb6c215cf2dba 470 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 87 2.4E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Pfam PF00874 PRD domain 289 374 1.2E-10 T 14-10-2018 IPR011608 PRD domain GO:0006355 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Gene3D G3DSA:3.40.930.10 491 634 3.5E-5 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 SUPERFAMILY SSF63520 275 379 1.44E-10 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Gene3D G3DSA:1.10.1790.10 284 377 3.4E-6 T 14-10-2018 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Pfam PF05043 Mga helix-turn-helix domain 74 150 6.6E-8 T 14-10-2018 IPR007737 Mga helix-turn-helix domain llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 SUPERFAMILY SSF46785 1 49 4.49E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 SUPERFAMILY SSF55804 511 633 4.71E-10 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 5 58 8.6E-8 T 14-10-2018 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain llmg_0023 49eed827814e364f7afb43a15e87ed5b 644 Gene3D G3DSA:1.10.10.10 3 140 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0687 16ffd7ebfbe911b0fe5f5a84311ac11e 55 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 7 21 0.003 T 14-10-2018 IPR010133 Bacteriocin-type signal sequence llmg_0687 16ffd7ebfbe911b0fe5f5a84311ac11e 55 Pfam PF04369 Lactococcin-like family 1 28 2.0E-8 T 14-10-2018 IPR007464 Bacteriocin, class IId GO:0005576|GO:0042742 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 SUPERFAMILY SSF81665 3 872 2.35E-113 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 177 359 5.8E-25 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 589 706 3.7E-33 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 81 197 9.4E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 527 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 653 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 637 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 7.5E-39 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Pfam PF00702 haloacid dehalogenase-like hydrolase 330 632 6.6E-22 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 SUPERFAMILY SSF56784 330 722 9.89E-57 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Gene3D G3DSA:3.40.50.1000 329 662 1.3E-281 T 14-10-2018 IPR023214 HAD superfamily llmg_1086 848e3d509afe7c1dde943b28de90390e 877 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Gene3D G3DSA:2.70.150.10 17 225 1.3E-281 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Pfam PF00122 E1-E2 ATPase 110 312 2.7E-57 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 SMART SM00831 2 75 2.3E-19 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 SUPERFAMILY SSF81660 339 520 6.87E-51 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 SUPERFAMILY SSF81653 113 222 2.88E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Pfam PF00689 Cation transporting ATPase, C-terminus 702 870 8.4E-39 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Gene3D G3DSA:1.20.1110.10 53 869 1.3E-281 T 14-10-2018 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 590 606 2.4E-14 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 649 674 2.4E-14 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 618 634 2.4E-14 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 475 493 2.4E-14 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Gene3D G3DSA:3.40.1110.10 342 523 1.3E-281 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 69 2.0E-15 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_1086 848e3d509afe7c1dde943b28de90390e 877 TIGRFAM TIGR01517 ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 17 870 5.1E-153 T 14-10-2018 IPR006408 P-type ATPase, subfamily IIB GO:0005388|GO:0005524|GO:0016020|GO:0070588 Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 81 97 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 216 230 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 274 298 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 324 342 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 247 273 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 299 323 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 PRINTS PR01050 Pyruvate kinase family signature 343 359 2.3E-66 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 Gene3D G3DSA:3.40.1380.20 371 498 2.2E-40 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 Gene3D G3DSA:3.20.20.60 38 361 8.4E-113 T 14-10-2018 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 SUPERFAMILY SSF52935 353 501 2.49E-40 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 SUPERFAMILY SSF51621 3 368 4.54E-79 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 SUPERFAMILY SSF50800 92 194 1.05E-16 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 ProSitePatterns PS00110 Pyruvate kinase active site signature. 245 257 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 Gene3D G3DSA:2.40.33.10 93 195 8.4E-113 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 Pfam PF00224 Pyruvate kinase, barrel domain 3 373 4.4E-155 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 Pfam PF02887 Pyruvate kinase, alpha/beta domain 387 498 1.7E-34 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_1119 85a59196e9a4a6df86ac6e4de7164007 502 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 37 501 9.3E-146 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 llmg_2464 245647216c884f5507f7b66f91425e7f 513 SUPERFAMILY SSF50249 9 67 2.28E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2464 245647216c884f5507f7b66f91425e7f 513 Gene3D G3DSA:3.40.1350.30 131 308 9.8E-96 T 14-10-2018 llmg_2464 245647216c884f5507f7b66f91425e7f 513 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 458 468 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site llmg_2464 245647216c884f5507f7b66f91425e7f 513 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 18 468 7.1E-118 T 14-10-2018 llmg_2464 245647216c884f5507f7b66f91425e7f 513 Pfam PF01938 TRAM domain 5 60 7.4E-10 T 14-10-2018 IPR002792 TRAM domain llmg_2464 245647216c884f5507f7b66f91425e7f 513 SUPERFAMILY SSF53335 69 475 9.11E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2464 245647216c884f5507f7b66f91425e7f 513 Gene3D G3DSA:3.40.50.150 84 470 9.8E-96 T 14-10-2018 llmg_2464 245647216c884f5507f7b66f91425e7f 513 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 298 475 1.1E-17 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 llmg_2464 245647216c884f5507f7b66f91425e7f 513 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 407 438 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site llmg_2464 245647216c884f5507f7b66f91425e7f 513 Gene3D G3DSA:2.40.50.140 3 79 2.6E-20 T 14-10-2018 llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 Pfam PF00005 ABC transporter 30 192 4.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 308 1.0E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 SMART SM00382 39 242 5.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 SUPERFAMILY SSF52540 10 263 2.93E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 317 5.2E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_1457 36c5bad6c69ef17eee2cc8cd036cc4a5 354 Gene3D G3DSA:3.40.50.300 8 344 1.2E-92 T 14-10-2018 llmg_2340 323fb0539911ff00886d3d79df5e0c63 209 Gene3D G3DSA:2.30.110.10 57 208 2.5E-11 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 llmg_2340 323fb0539911ff00886d3d79df5e0c63 209 SUPERFAMILY SSF50475 77 206 7.24E-8 T 14-10-2018 llmg_0790 51cadb3baa105af8b042407ad9b84f22 377 SUPERFAMILY SSF56349 71 366 2.21E-46 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_0790 51cadb3baa105af8b042407ad9b84f22 377 Gene3D G3DSA:1.10.150.130 69 184 8.1E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_0790 51cadb3baa105af8b042407ad9b84f22 377 Pfam PF00589 Phage integrase family 185 360 1.1E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0790 51cadb3baa105af8b042407ad9b84f22 377 Gene3D G3DSA:1.10.443.10 185 375 7.2E-41 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:3.40.50.300 3 177 3.2E-32 T 14-10-2018 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1035 1179 1.6E-4 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 6 1192 1.4E-295 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 SUPERFAMILY SSF52540 4 885 1.88E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 SUPERFAMILY SSF52980 1025 1184 1.34E-18 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Pfam PF13361 UvrD-like helicase C-terminal domain 463 879 2.6E-35 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:1.10.10.160 295 372 5.8E-31 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:1.10.486.10 605 766 2.3E-48 T 14-10-2018 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 3 1199 16.544 T 14-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:3.90.320.10 973 1196 7.8E-40 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:3.40.50.300 373 453 5.8E-31 T 14-10-2018 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 454 1.2E-127 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 llmg_0004 c21ac2596335dca0d9691fbb6d9a7c0d 1203 Gene3D G3DSA:1.10.10.1560 837 892 5.9E-7 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 2.7E-51 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 SUPERFAMILY SSF52317 1 190 5.5E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 42 56 7.7E-5 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 72 88 7.7E-5 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 Pfam PF00117 Glutamine amidotransferase class-I 4 186 3.8E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 97 105 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 72 83 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 118 130 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 45 54 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00097 Anthranilate synthase component II signature 164 177 8.9E-32 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 Gene3D G3DSA:3.40.50.880 1 190 2.7E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 1.5E-11 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 45 54 1.5E-11 T 14-10-2018 llmg_1031 a5f651a22296fecebd3e594f92f2e126 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 1.5E-11 T 14-10-2018 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 Gene3D G3DSA:3.90.110.10 148 314 3.0E-65 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 SUPERFAMILY SSF56327 146 313 8.07E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 SUPERFAMILY SSF51735 3 145 2.12E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 1.1E-46 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 46.24 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 5.2E-43 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 5.2E-43 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 5.2E-43 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 5.2E-43 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 5.2E-43 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 Gene3D G3DSA:3.40.50.720 1 147 3.2E-58 T 14-10-2018 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 PIRSF PIRSF000102 2 314 2.1E-114 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 308 4.5E-129 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_0392 96ad06e046a3051afb249e80257ac2c3 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 312 8.4E-36 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 llmg_2148 a9907d37c6686dd28bded18a76861600 154 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 122 1.3E-48 T 14-10-2018 IPR028973 PhnB-like llmg_2148 a9907d37c6686dd28bded18a76861600 154 SUPERFAMILY SSF54593 4 153 5.18E-38 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_2148 a9907d37c6686dd28bded18a76861600 154 PIRSF PIRSF021700 1 154 7.1E-65 T 14-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase llmg_2148 a9907d37c6686dd28bded18a76861600 154 Gene3D G3DSA:3.10.180.70 1 154 6.3E-57 T 14-10-2018 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 178 4.0E-60 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 160 172 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 Gene3D G3DSA:3.30.230.40 1 92 4.5E-32 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 SUPERFAMILY SSF54211 90 183 4.68E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 Gene3D G3DSA:3.30.230.40 93 199 6.9E-39 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 199 42.353 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 64 77 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 llmg_1294 08331a38eba90f953a12ed9bd238efd8 199 SUPERFAMILY SSF54211 1 88 3.79E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 Gene3D G3DSA:1.20.120.220 70 237 1.9E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 236 13.151 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 SUPERFAMILY SSF81336 70 230 4.97E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 Pfam PF00119 ATP synthase A chain 20 230 6.9E-53 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 17 232 8.5E-45 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 PRINTS PR00123 ATP synthase A subunit signature 216 231 1.9E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 PRINTS PR00123 ATP synthase A subunit signature 77 93 1.9E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 PRINTS PR00123 ATP synthase A subunit signature 163 185 1.9E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 PRINTS PR00123 ATP synthase A subunit signature 147 162 1.9E-21 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1951 fe3c6cb15fa605ab884fc271dc1bcba1 237 ProSitePatterns PS00449 ATP synthase a subunit signature. 166 175 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 Pfam PF00232 Glycosyl hydrolase family 1 8 475 6.5E-170 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 Gene3D G3DSA:3.20.20.80 1 478 6.3E-176 T 14-10-2018 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 2.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 2.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 2.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 2.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.2E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site llmg_0190 1b9e03ce238bcb222b5c40165109fd41 478 SUPERFAMILY SSF51445 7 477 1.29E-165 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_2218 28d419edd95dfd25fdf0873dfdc2c067 386 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 174 380 1.2E-25 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_2218 28d419edd95dfd25fdf0873dfdc2c067 386 SMART SM00530 11 64 5.4E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2218 28d419edd95dfd25fdf0873dfdc2c067 386 Gene3D G3DSA:1.10.260.40 4 67 5.7E-6 T 14-10-2018 llmg_2218 28d419edd95dfd25fdf0873dfdc2c067 386 SUPERFAMILY SSF47413 7 66 6.33E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_2218 28d419edd95dfd25fdf0873dfdc2c067 386 Pfam PF01381 Helix-turn-helix 13 64 3.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 PIRSF PIRSF000116 4 325 6.7E-56 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 178 1.1E-73 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 3 329 44.182 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 4.8E-61 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 SUPERFAMILY SSF48179 184 329 6.46E-65 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 328 4.0E-132 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 Gene3D G3DSA:1.10.3730.40 183 334 1.3E-65 T 14-10-2018 llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 SUPERFAMILY SSF51735 4 183 3.55E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1277 ed24854f880c01b99eccb3745e596e4e 340 Gene3D G3DSA:3.40.50.720 1 182 7.1E-77 T 14-10-2018 llmg_1781 88c8874e4f1e7a911bf2c49247f8cd8b 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 6 144 33.715 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_1781 88c8874e4f1e7a911bf2c49247f8cd8b 144 Gene3D G3DSA:3.10.129.10 1 142 2.0E-55 T 14-10-2018 llmg_1781 88c8874e4f1e7a911bf2c49247f8cd8b 144 Pfam PF07977 FabA-like domain 15 135 1.1E-35 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_1781 88c8874e4f1e7a911bf2c49247f8cd8b 144 SUPERFAMILY SSF54637 8 141 4.12E-46 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_1781 88c8874e4f1e7a911bf2c49247f8cd8b 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 141 3.0E-59 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_1657 289b2fd9f8fe6acf8d98365f7015dc6c 324 Gene3D G3DSA:1.10.443.10 109 318 3.7E-38 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1657 289b2fd9f8fe6acf8d98365f7015dc6c 324 SUPERFAMILY SSF56349 6 305 6.77E-48 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1657 289b2fd9f8fe6acf8d98365f7015dc6c 324 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 17 90 4.5E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_1657 289b2fd9f8fe6acf8d98365f7015dc6c 324 Gene3D G3DSA:1.10.150.130 1 108 2.8E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_1657 289b2fd9f8fe6acf8d98365f7015dc6c 324 Pfam PF00589 Phage integrase family 151 304 2.0E-29 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.7E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 SMART SM00357 3 65 3.0E-28 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 SUPERFAMILY SSF50249 1 64 1.11E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 PIRSF PIRSF002599 1 65 3.8E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 PRINTS PR00050 Cold shock protein signature 24 33 2.1E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site llmg_0180 090e5e57040f493763f3e7f000d9ac62 65 Gene3D G3DSA:2.40.50.140 1 65 9.9E-30 T 14-10-2018 llmg_1986 926e14b9c311219373a4e5ddba0ad83c 101 SUPERFAMILY SSF46767 5 87 3.27E-17 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 llmg_1986 926e14b9c311219373a4e5ddba0ad83c 101 Gene3D G3DSA:1.10.10.10 4 100 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1986 926e14b9c311219373a4e5ddba0ad83c 101 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 86 2.6E-16 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 llmg_0329 21b0235f19349c3505d897118fc891f6 571 SMART SM00382 366 545 8.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0329 21b0235f19349c3505d897118fc891f6 571 SUPERFAMILY SSF52540 337 568 7.67E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0329 21b0235f19349c3505d897118fc891f6 571 SUPERFAMILY SSF90123 15 322 4.97E-12 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0329 21b0235f19349c3505d897118fc891f6 571 Gene3D G3DSA:3.40.50.300 328 570 1.8E-62 T 14-10-2018 llmg_0329 21b0235f19349c3505d897118fc891f6 571 Gene3D G3DSA:1.20.1560.10 117 324 1.5E-7 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0329 21b0235f19349c3505d897118fc891f6 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0329 21b0235f19349c3505d897118fc891f6 571 Pfam PF00005 ABC transporter 359 497 7.4E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2017 ba041d0586816866fd99dd327ec133da 447 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 3 447 40.077 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 llmg_2017 ba041d0586816866fd99dd327ec133da 447 Gene3D G3DSA:3.30.930.10 111 447 1.8E-106 T 14-10-2018 llmg_2017 ba041d0586816866fd99dd327ec133da 447 SUPERFAMILY SSF55681 108 446 5.17E-89 T 14-10-2018 llmg_2017 ba041d0586816866fd99dd327ec133da 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 206 219 7.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2017 ba041d0586816866fd99dd327ec133da 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 7.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2017 ba041d0586816866fd99dd327ec133da 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 362 378 7.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2017 ba041d0586816866fd99dd327ec133da 447 PRINTS PR01042 Aspartyl-tRNA synthetase signature 402 416 7.6E-14 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2017 ba041d0586816866fd99dd327ec133da 447 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 8 446 9.6E-141 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 llmg_2017 ba041d0586816866fd99dd327ec133da 447 Pfam PF01336 OB-fold nucleic acid binding domain 18 105 1.9E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 llmg_2017 ba041d0586816866fd99dd327ec133da 447 SUPERFAMILY SSF50249 11 112 1.93E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2017 ba041d0586816866fd99dd327ec133da 447 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 441 6.6E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2017 ba041d0586816866fd99dd327ec133da 447 Gene3D G3DSA:2.40.50.140 1 110 9.8E-20 T 14-10-2018 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 460 6.3E-195 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 SMART SM00116 100 150 1.0E-9 T 14-10-2018 IPR000644 CBS domain llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 SMART SM00116 163 211 1.1E-8 T 14-10-2018 IPR000644 CBS domain llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 492 83.509 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 SMART SM01240 11 479 0.0 T 14-10-2018 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 300 312 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 479 1.5E-161 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 Gene3D G3DSA:3.20.20.70 2 492 1.9E-231 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 Pfam PF00571 CBS domain 99 146 1.5E-7 T 14-10-2018 IPR000644 CBS domain llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 Pfam PF00571 CBS domain 158 209 1.2E-8 T 14-10-2018 IPR000644 CBS domain llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 SUPERFAMILY SSF54631 68 210 1.01E-31 T 14-10-2018 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 SUPERFAMILY SSF51412 7 483 1.03E-119 T 14-10-2018 llmg_0230 56b0a0d21b84ac41da44c5afa49b1be7 493 PIRSF PIRSF000130 3 493 1.4E-207 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 llmg_0045 8d4a7beb4e82d0f0bbdb72c87bcb1600 441 Gene3D G3DSA:3.40.570.10 115 344 9.6E-37 T 14-10-2018 llmg_0045 8d4a7beb4e82d0f0bbdb72c87bcb1600 441 Pfam PF13930 DNA/RNA non-specific endonuclease 224 317 1.0E-9 T 14-10-2018 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 Gene3D G3DSA:1.20.1250.20 198 372 1.7E-31 T 14-10-2018 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 Gene3D G3DSA:1.20.1250.20 1 197 7.8E-39 T 14-10-2018 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 SUPERFAMILY SSF103473 2 227 1.07E-40 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 Pfam PF07690 Major Facilitator Superfamily 2 248 5.6E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 SUPERFAMILY SSF103473 196 373 2.35E-30 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 PRINTS PR01035 Tetracycline resistance protein signature 1 17 1.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 PRINTS PR01035 Tetracycline resistance protein signature 120 142 1.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 PRINTS PR01035 Tetracycline resistance protein signature 63 87 1.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0140 6c2b438b5225e696999a4cb2c0ef0785 381 PRINTS PR01035 Tetracycline resistance protein signature 324 347 1.2E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_2142 750af9cd986ec5cc9025dd071f546b36 404 SUPERFAMILY SSF56349 82 395 2.88E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_2142 750af9cd986ec5cc9025dd071f546b36 404 Gene3D G3DSA:1.10.443.10 202 402 6.0E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_2142 750af9cd986ec5cc9025dd071f546b36 404 Gene3D G3DSA:1.10.150.130 80 201 4.4E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_2142 750af9cd986ec5cc9025dd071f546b36 404 Pfam PF00589 Phage integrase family 202 387 2.3E-28 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_2142 750af9cd986ec5cc9025dd071f546b36 404 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 82 137 3.9E-13 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 139 711 1.5E-158 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Pfam PF00403 Heavy-metal-associated domain 8 64 1.3E-10 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Pfam PF00702 haloacid dehalogenase-like hydrolase 412 622 2.8E-28 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Pfam PF00122 E1-E2 ATPase 228 396 1.6E-49 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00942 Copper-transporting ATPase 1 signature 26 47 1.9E-12 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00942 Copper-transporting ATPase 1 signature 120 140 1.9E-12 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00942 Copper-transporting ATPase 1 signature 140 165 1.9E-12 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 711 1.0E-116 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 SUPERFAMILY SSF55008 3 68 7.85E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Gene3D G3DSA:3.40.50.1000 397 661 1.1E-63 T 14-10-2018 IPR023214 HAD superfamily llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 SUPERFAMILY SSF81665 176 684 7.06E-14 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Gene3D G3DSA:3.30.70.100 3 70 2.6E-17 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 466 696 2.9E-36 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 192 439 1.3E-42 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 SUPERFAMILY SSF56784 414 709 2.95E-46 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Gene3D G3DSA:2.70.150.20 197 320 3.1E-28 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 418 424 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 644 8.7E-23 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 266 280 8.7E-23 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 628 8.7E-23 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 570 8.7E-23 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 416 430 8.7E-23 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 ProSitePatterns PS01229 Hypothetical cof family signature 2. 609 631 - T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 157 711 2.0E-159 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 Gene3D G3DSA:3.40.1110.10 427 545 1.1E-63 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00943 Copper-transporting ATPase signature 339 353 1.5E-11 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00943 Copper-transporting ATPase signature 142 161 1.5E-11 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00943 Copper-transporting ATPase signature 190 209 1.5E-11 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00943 Copper-transporting ATPase signature 46 66 1.5E-11 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 PRINTS PR00943 Copper-transporting ATPase signature 399 414 1.5E-11 T 14-10-2018 llmg_1729 77bfeeefd6aec113412ccf634bd6f9a0 720 SUPERFAMILY SSF81653 232 316 7.59E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_2064 9dd00bc525ee5cab14f7de946b1c0f1d 366 SUPERFAMILY SSF51905 1 359 1.13E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2064 9dd00bc525ee5cab14f7de946b1c0f1d 366 SUPERFAMILY SSF54373 214 303 3.01E-10 T 14-10-2018 llmg_2064 9dd00bc525ee5cab14f7de946b1c0f1d 366 Pfam PF01266 FAD dependent oxidoreductase 3 343 3.6E-42 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 llmg_2064 9dd00bc525ee5cab14f7de946b1c0f1d 366 Gene3D G3DSA:3.30.9.10 84 304 2.6E-51 T 14-10-2018 llmg_2064 9dd00bc525ee5cab14f7de946b1c0f1d 366 Gene3D G3DSA:3.50.50.60 5 343 2.6E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2347 e20204bfbc19667712e0fe501401928f 324 SUPERFAMILY SSF54211 1 173 1.52E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2347 e20204bfbc19667712e0fe501401928f 324 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 93 104 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 llmg_2347 e20204bfbc19667712e0fe501401928f 324 Pfam PF00288 GHMP kinases N terminal domain 87 154 3.7E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_2347 e20204bfbc19667712e0fe501401928f 324 Gene3D G3DSA:3.30.230.120 1 324 2.0E-101 T 14-10-2018 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PRINTS PR00960 LmbP protein signature 6 21 9.9E-42 T 14-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PRINTS PR00960 LmbP protein signature 241 265 9.9E-42 T 14-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PRINTS PR00960 LmbP protein signature 269 288 9.9E-42 T 14-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PRINTS PR00960 LmbP protein signature 134 153 9.9E-42 T 14-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PRINTS PR00960 LmbP protein signature 92 113 9.9E-42 T 14-10-2018 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0016301 KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 PIRSF PIRSF036406 1 324 8.6E-95 T 14-10-2018 IPR014606 D,D-heptose 7-phosphate kinase KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478 llmg_2347 e20204bfbc19667712e0fe501401928f 324 Pfam PF08544 GHMP kinases C terminal 228 303 9.4E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_2347 e20204bfbc19667712e0fe501401928f 324 SUPERFAMILY SSF55060 183 304 1.62E-23 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_2271 54812066c920b1a78b5c201db89d2e71 256 Gene3D G3DSA:3.40.50.300 1 243 1.6E-63 T 14-10-2018 llmg_2271 54812066c920b1a78b5c201db89d2e71 256 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2271 54812066c920b1a78b5c201db89d2e71 256 SMART SM00382 26 208 9.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2271 54812066c920b1a78b5c201db89d2e71 256 Pfam PF00005 ABC transporter 17 160 7.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2271 54812066c920b1a78b5c201db89d2e71 256 SUPERFAMILY SSF52540 2 225 1.7E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 112 132 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 335 355 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 304 320 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 358 377 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 172 182 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 PRINTS PR00301 70kDa heat shock protein signature 439 455 3.8E-78 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Gene3D G3DSA:3.30.420.40 5 347 7.0E-147 T 14-10-2018 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Gene3D G3DSA:2.60.34.10 353 493 1.5E-63 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 SUPERFAMILY SSF53067 160 351 4.69E-65 T 14-10-2018 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Gene3D G3DSA:1.20.1270.10 494 577 2.9E-21 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Gene3D G3DSA:3.90.640.10 198 279 7.0E-147 T 14-10-2018 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 606 36.411 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 SUPERFAMILY SSF53067 1 157 7.22E-56 T 14-10-2018 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 6.4E-285 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 SUPERFAMILY SSF100920 354 510 2.49E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Pfam PF00012 Hsp70 protein 4 573 5.0E-240 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 SUPERFAMILY SSF100934 477 575 2.62E-15 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 llmg_1574 2a87eb56f9412f529cdc03eea04bb033 607 Gene3D G3DSA:3.30.420.40 159 337 7.0E-147 T 14-10-2018 llmg_1965 90268384d4b59c388de7cf7201a61eed 414 ProSitePatterns PS00455 Putative AMP-binding domain signature. 101 112 - T 14-10-2018 IPR020845 AMP-binding, conserved site llmg_1965 90268384d4b59c388de7cf7201a61eed 414 Gene3D G3DSA:3.40.50.12780 4 314 3.9E-29 T 14-10-2018 llmg_1965 90268384d4b59c388de7cf7201a61eed 414 Gene3D G3DSA:3.30.300.30 315 408 2.4E-12 T 14-10-2018 llmg_1965 90268384d4b59c388de7cf7201a61eed 414 SUPERFAMILY SSF56801 9 407 4.97E-51 T 14-10-2018 llmg_1965 90268384d4b59c388de7cf7201a61eed 414 Pfam PF00501 AMP-binding enzyme 94 317 1.7E-18 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 SUPERFAMILY SSF51905 6 418 1.32E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 4.4E-6 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.4E-6 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 Gene3D G3DSA:1.10.8.260 282 344 2.2E-116 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 Gene3D G3DSA:3.50.50.60 11 410 2.2E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 SUPERFAMILY SSF160996 201 362 3.01E-39 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 172 1.8E-9 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 1.8E-9 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 Pfam PF03486 HI0933-like protein 8 414 4.1E-144 T 14-10-2018 llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 10 414 1.3E-142 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like llmg_0265 c4c3a5c71b45f9f50a6cb42468b1df14 424 Gene3D G3DSA:2.40.30.10 196 361 2.2E-116 T 14-10-2018 llmg_1468 10788564d0ac5f2ef952d71cf36740c3 233 SMART SM00382 32 215 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1468 10788564d0ac5f2ef952d71cf36740c3 233 Pfam PF00005 ABC transporter 24 166 2.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1468 10788564d0ac5f2ef952d71cf36740c3 233 Gene3D G3DSA:3.40.50.300 2 229 3.5E-63 T 14-10-2018 llmg_1468 10788564d0ac5f2ef952d71cf36740c3 233 SUPERFAMILY SSF52540 4 223 3.1E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1468 10788564d0ac5f2ef952d71cf36740c3 233 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0364 60b28f417c5498775c148afede9e86e8 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 302 2.2E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0364 60b28f417c5498775c148afede9e86e8 303 SUPERFAMILY SSF161098 89 290 6.98E-16 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0364 60b28f417c5498775c148afede9e86e8 303 Gene3D G3DSA:1.10.3720.10 82 297 1.8E-18 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 SUPERFAMILY SSF54631 213 357 1.17E-30 T 14-10-2018 llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Pfam PF01595 Domain of unknown function DUF21 16 201 3.0E-47 T 14-10-2018 IPR002550 CNNM, transmembrane domain llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Pfam PF00571 CBS domain 224 275 1.3E-4 T 14-10-2018 IPR000644 CBS domain llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Pfam PF00571 CBS domain 290 339 2.2E-7 T 14-10-2018 IPR000644 CBS domain llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Gene3D G3DSA:3.30.465.10 355 436 7.9E-22 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Pfam PF03471 Transporter associated domain 355 436 4.1E-18 T 14-10-2018 IPR005170 Transporter-associated domain llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 SUPERFAMILY SSF56176 355 435 1.12E-19 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 SMART SM01091 354 438 3.4E-17 T 14-10-2018 IPR005170 Transporter-associated domain llmg_1999 5ab0bd9b56fd72496a25d0136c3e98d2 445 Gene3D G3DSA:3.10.580.10 199 354 1.2E-50 T 14-10-2018 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 6.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 6.2E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Pfam PF13167 GTP-binding GTPase N-terminal 26 114 1.9E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 SUPERFAMILY SSF52540 199 370 8.94E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Pfam PF16360 GTP-binding GTPase Middle Region 116 194 4.8E-29 T 14-10-2018 IPR032305 GTP-binding protein, middle domain llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 358 5.3E-129 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Hamap MF_00900 GTPase HflX [hflX]. 29 388 42.087 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Gene3D G3DSA:3.40.50.11060 17 140 3.1E-38 T 14-10-2018 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Gene3D G3DSA:3.40.50.300 201 364 3.5E-32 T 14-10-2018 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 Pfam PF01926 50S ribosome-binding GTPase 201 322 6.6E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0233 0c875f3d7ba438851c3ce759bdfdd4d2 414 PIRSF PIRSF006809 2 413 3.3E-135 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 llmg_2243 2ee7c521c45fca37334a2df859da052a 430 Pfam PF01136 Peptidase family U32 84 312 3.1E-87 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 llmg_2243 2ee7c521c45fca37334a2df859da052a 430 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 llmg_2243 2ee7c521c45fca37334a2df859da052a 430 Gene3D G3DSA:2.40.30.10 323 411 1.5E-26 T 14-10-2018 llmg_2243 2ee7c521c45fca37334a2df859da052a 430 Pfam PF16325 Peptidase family U32 C-terminal domain 326 408 7.2E-19 T 14-10-2018 IPR032525 Peptidase family U32, C-terminal llmg_1210 9fe2326575f56967ce59530931c52e68 519 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 456 3.3E-82 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 llmg_1210 9fe2326575f56967ce59530931c52e68 519 Pfam PF07690 Major Facilitator Superfamily 27 430 1.5E-41 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1210 9fe2326575f56967ce59530931c52e68 519 Gene3D G3DSA:1.20.1250.20 281 500 5.1E-23 T 14-10-2018 llmg_1210 9fe2326575f56967ce59530931c52e68 519 SUPERFAMILY SSF103473 17 500 1.44E-55 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_1210 9fe2326575f56967ce59530931c52e68 519 Gene3D G3DSA:1.20.1250.20 16 219 5.2E-27 T 14-10-2018 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 10 183 22.057 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 PRINTS PR00338 Transcription termination factor NUSG signature 65 77 2.6E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 PRINTS PR00338 Transcription termination factor NUSG signature 159 175 2.6E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 SMART SM00738 10 121 7.0E-48 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 SMART SM00739 131 158 4.6E-5 T 14-10-2018 IPR005824 KOW llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 Pfam PF02357 Transcription termination factor nusG 13 118 1.2E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 Gene3D G3DSA:3.30.70.940 8 124 9.8E-39 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 13 183 1.1E-49 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 SUPERFAMILY SSF50104 129 183 4.11E-13 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 SUPERFAMILY SSF82679 12 120 1.01E-33 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 Pfam PF00467 KOW motif 134 165 2.3E-5 T 14-10-2018 IPR005824 KOW llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 ProSitePatterns PS01014 Transcription termination factor nusG signature. 166 175 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site llmg_2388 4615cddeea3a0c86241ce3e3e7e0f7d9 185 Gene3D G3DSA:2.30.30.30 125 183 1.6E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 Gene3D G3DSA:1.10.1370.20 227 600 5.5E-125 T 14-10-2018 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 Pfam PF08439 Oligopeptidase F 113 182 8.6E-21 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 SUPERFAMILY SSF55486 53 597 4.19E-125 T 14-10-2018 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 Pfam PF01432 Peptidase family M3 203 582 2.6E-82 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 5 594 1.0E-178 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 Gene3D G3DSA:1.20.140.70 22 178 2.3E-47 T 14-10-2018 llmg_1909 3229f4d8b530713f36629c8ea9311ffb 601 Gene3D G3DSA:1.10.287.830 180 226 1.2E-20 T 14-10-2018 llmg_1742 9ca903ff20ed98a94d754d2d9772f3f2 223 Gene3D G3DSA:1.10.10.60 98 204 5.7E-9 T 14-10-2018 llmg_1742 9ca903ff20ed98a94d754d2d9772f3f2 223 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 186 206 2.6E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 llmg_1742 9ca903ff20ed98a94d754d2d9772f3f2 223 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 169 186 2.6E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 llmg_1742 9ca903ff20ed98a94d754d2d9772f3f2 223 SUPERFAMILY SSF46689 130 203 5.89E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1742 9ca903ff20ed98a94d754d2d9772f3f2 223 Pfam PF02954 Bacterial regulatory protein, Fis family 164 203 1.9E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 SUPERFAMILY SSF54631 274 391 6.7E-16 T 14-10-2018 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 SMART SM00382 53 250 7.0E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 Gene3D G3DSA:3.10.580.10 276 392 2.0E-13 T 14-10-2018 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 Pfam PF00571 CBS domain 337 390 0.0019 T 14-10-2018 IPR000644 CBS domain llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 Pfam PF00005 ABC transporter 46 192 1.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 391 3.4E-144 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 SUPERFAMILY SSF52540 40 270 2.4E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1048 d3390e4dc2fa43aec593a5fed2d89871 407 Gene3D G3DSA:3.40.50.300 31 269 3.3E-73 T 14-10-2018 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Pfam PF02779 Transketolase, pyrimidine binding domain 354 521 6.2E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Gene3D G3DSA:3.40.50.920 536 655 1.5E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 SMART SM00861 351 522 9.7E-64 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 338 5.3E-146 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Pfam PF02780 Transketolase, C-terminal domain 551 650 1.9E-9 T 14-10-2018 IPR033248 Transketolase, C-terminal domain llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 ProSitePatterns PS00802 Transketolase signature 2. 464 480 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Gene3D G3DSA:3.40.50.970 1 327 1.1E-118 T 14-10-2018 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 656 1.3E-268 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 SUPERFAMILY SSF52518 341 524 5.67E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 SUPERFAMILY SSF52518 6 325 5.7E-112 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 Gene3D G3DSA:3.40.50.970 328 531 1.8E-72 T 14-10-2018 llmg_0868 7194b4a95c7b2d66c66ccf394b531e60 658 SUPERFAMILY SSF52922 532 656 2.71E-34 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 Gene3D G3DSA:3.30.160.20 160 225 2.1E-19 T 14-10-2018 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 Pfam PF00035 Double-stranded RNA binding motif 161 225 9.7E-14 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 SUPERFAMILY SSF69065 4 163 4.36E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 SMART SM00535 20 155 2.1E-49 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 Gene3D G3DSA:1.10.1520.10 4 151 6.1E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 Pfam PF14622 Ribonuclease-III-like 18 147 3.1E-33 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 SMART SM00358 161 228 5.2E-17 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 SUPERFAMILY SSF54768 150 225 1.16E-20 T 14-10-2018 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 225 2.9E-74 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 llmg_1753 448ef67e69bc82761429ce42a110ce9b 231 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 224 29.374 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 llmg_2337 b8ffc8376dd02276801f792c59caf42f 107 Gene3D G3DSA:1.10.1900.10 1 107 5.0E-31 T 14-10-2018 llmg_2337 b8ffc8376dd02276801f792c59caf42f 107 SUPERFAMILY SSF158560 2 105 7.85E-27 T 14-10-2018 llmg_2337 b8ffc8376dd02276801f792c59caf42f 107 Pfam PF06304 Protein of unknown function (DUF1048) 8 104 2.1E-34 T 14-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 Pfam PF02863 Arginine repressor, C-terminal domain 80 147 5.5E-18 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 Gene3D G3DSA:3.30.1360.40 71 149 4.6E-17 T 14-10-2018 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 150 7.7E-53 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 Pfam PF01316 Arginine repressor, DNA binding domain 1 64 5.1E-21 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 SUPERFAMILY SSF46785 1 65 1.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 92 152 0.002 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 SUPERFAMILY SSF55252 78 148 4.19E-15 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 Gene3D G3DSA:1.10.10.10 1 63 2.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 PRINTS PR01467 Bacterial arginine repressor signature 37 52 6.0E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 PRINTS PR01467 Bacterial arginine repressor signature 119 134 6.0E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 PRINTS PR01467 Bacterial arginine repressor signature 87 100 6.0E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 PRINTS PR01467 Bacterial arginine repressor signature 21 34 6.0E-19 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_2315 371f2d6495e5dd72b670dc7144bc3002 152 Hamap MF_00173 Arginine repressor [argR]. 1 152 47.451 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1398 9fd671317694c7484990e4549c787c61 1243 Gene3D G3DSA:2.60.530.10 202 478 7.7E-13 T 14-10-2018 IPR036234 Glucan-binding protein C/Surface antigen I/II, V-domain superfamily llmg_1398 9fd671317694c7484990e4549c787c61 1243 Gene3D G3DSA:2.60.40.740 646 816 7.1E-57 T 14-10-2018 llmg_1398 9fd671317694c7484990e4549c787c61 1243 TIGRFAM TIGR04228 isopep_sspB_C2: adhesin isopeptide-forming adherence domain 645 813 8.2E-56 T 14-10-2018 IPR026345 Adhesin isopeptide-forming adherence domain llmg_1398 9fd671317694c7484990e4549c787c61 1243 SUPERFAMILY SSF74914 127 486 1.19E-82 T 14-10-2018 IPR036234 Glucan-binding protein C/Surface antigen I/II, V-domain superfamily llmg_1398 9fd671317694c7484990e4549c787c61 1243 Gene3D G3DSA:2.60.40.740 500 644 1.6E-37 T 14-10-2018 llmg_1398 9fd671317694c7484990e4549c787c61 1243 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1198 1227 1.8E-4 T 14-10-2018 llmg_1398 9fd671317694c7484990e4549c787c61 1243 Gene3D G3DSA:2.60.40.740 1048 1191 2.3E-8 T 14-10-2018 llmg_0318 73bfd65c76e5cababfab7eea9a9d459e 160 SUPERFAMILY SSF52833 18 157 6.41E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0318 73bfd65c76e5cababfab7eea9a9d459e 160 Pfam PF08534 Redoxin 21 156 2.1E-19 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 llmg_0318 73bfd65c76e5cababfab7eea9a9d459e 160 Gene3D G3DSA:3.40.30.10 5 160 5.9E-33 T 14-10-2018 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 Gene3D G3DSA:3.10.20.70 2 108 3.6E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 SUPERFAMILY SSF54368 4 105 1.16E-31 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 SUPERFAMILY SSF55931 107 444 3.73E-123 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 Gene3D G3DSA:3.30.590.10 109 446 3.5E-139 T 14-10-2018 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 235 250 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 100 3.6E-30 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 9 443 5.1E-170 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 Pfam PF00120 Glutamine synthetase, catalytic domain 107 442 3.0E-139 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 llmg_2484 fb00251dcb016674f353de6c3c92189e 446 SMART SM01230 106 356 1.8E-129 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.2E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 SUPERFAMILY SSF64288 59 234 2.83E-44 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 Gene3D G3DSA:3.40.1410.10 76 234 7.6E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 2.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 SUPERFAMILY SSF46785 4 79 6.23E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 SMART SM00866 92 230 1.3E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 Gene3D G3DSA:1.10.10.10 6 75 1.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 Pfam PF07702 UTRA domain 92 230 3.2E-35 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 llmg_1065 8df8eed9f5973f9be2b83ee4daed8e7a 235 SMART SM00345 12 71 1.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0146 5da149eb6d6c8dce8a72932efa1ef231 303 SUPERFAMILY SSF51430 8 295 3.93E-70 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_0146 5da149eb6d6c8dce8a72932efa1ef231 303 Pfam PF00248 Aldo/keto reductase family 14 292 2.1E-54 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain llmg_0146 5da149eb6d6c8dce8a72932efa1ef231 303 Gene3D G3DSA:3.20.20.100 2 303 2.6E-84 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_0609 578f99085756069d4fa87ba9e41db96e 545 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 177 542 8.5E-72 T 14-10-2018 IPR003770 Endolytic murein transglycosylase llmg_0609 578f99085756069d4fa87ba9e41db96e 545 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 178 542 30.727 T 14-10-2018 IPR003770 Endolytic murein transglycosylase llmg_0609 578f99085756069d4fa87ba9e41db96e 545 Gene3D G3DSA:1.10.8.1150 212 285 3.5E-25 T 14-10-2018 llmg_0609 578f99085756069d4fa87ba9e41db96e 545 Pfam PF02618 YceG-like family 217 537 8.2E-70 T 14-10-2018 IPR003770 Endolytic murein transglycosylase llmg_1718 2c065ab119f62365f01b21328541e73f 669 Pfam PF02151 UvrB/uvrC motif 196 228 2.0E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 llmg_1718 2c065ab119f62365f01b21328541e73f 669 Gene3D G3DSA:3.40.1440.10 1 99 3.9E-35 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 llmg_1718 2c065ab119f62365f01b21328541e73f 669 SMART SM00465 15 95 1.1E-20 T 14-10-2018 IPR000305 GIY-YIG endonuclease llmg_1718 2c065ab119f62365f01b21328541e73f 669 Gene3D G3DSA:4.10.860.10 174 233 1.1E-6 T 14-10-2018 llmg_1718 2c065ab119f62365f01b21328541e73f 669 SUPERFAMILY SSF46600 182 235 2.22E-12 T 14-10-2018 IPR036876 UVR domain superfamily llmg_1718 2c065ab119f62365f01b21328541e73f 669 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 643 27.397 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 llmg_1718 2c065ab119f62365f01b21328541e73f 669 Gene3D G3DSA:3.30.420.340 422 579 1.0E-57 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily llmg_1718 2c065ab119f62365f01b21328541e73f 669 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 322 1.6E-112 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 llmg_1718 2c065ab119f62365f01b21328541e73f 669 Pfam PF01541 GIY-YIG catalytic domain 17 90 3.0E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease llmg_1718 2c065ab119f62365f01b21328541e73f 669 SUPERFAMILY SSF82771 15 97 3.14E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 llmg_1718 2c065ab119f62365f01b21328541e73f 669 Gene3D G3DSA:1.10.150.20 583 645 2.8E-16 T 14-10-2018 llmg_1718 2c065ab119f62365f01b21328541e73f 669 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 429 579 2.3E-54 T 14-10-2018 IPR001162 UvrC family homology region llmg_1718 2c065ab119f62365f01b21328541e73f 669 SUPERFAMILY SSF47781 559 652 1.05E-17 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 Gene3D G3DSA:3.40.50.1100 57 387 9.7E-191 T 14-10-2018 llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 393 5.7E-193 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 381 9.5E-46 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 Gene3D G3DSA:3.40.50.1100 13 209 9.7E-191 T 14-10-2018 llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 PIRSF PIRSF001413 1 400 1.5E-169 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 SUPERFAMILY SSF53686 6 391 5.89E-145 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme llmg_1041 6ea135647f84abc806571a16cca6ee6e 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 394 52.85 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 Gene3D G3DSA:3.20.20.70 6 297 4.2E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 SUPERFAMILY SSF51569 15 296 6.38E-83 T 14-10-2018 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 15 292 3.5E-90 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 144 174 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 PIRSF PIRSF001365 8 297 2.4E-79 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 Pfam PF00701 Dihydrodipicolinate synthetase family 13 289 1.1E-80 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 SMART SM01130 11 296 1.0E-105 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 114 130 7.3E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 81 99 7.3E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 139 156 7.3E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 45 66 7.3E-30 T 14-10-2018 IPR002220 DapA-like GO:0016829 llmg_0874 68ee2cda42197f6e7327ba7ca8d3ee1e 297 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 11 297 58.23 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 SMART SM00382 284 474 5.5 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 SMART SM00382 31 219 1.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 SUPERFAMILY SSF52540 5 224 2.39E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 Gene3D G3DSA:3.40.50.300 254 497 8.3E-43 T 14-10-2018 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 SUPERFAMILY SSF52540 257 491 7.94E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 Gene3D G3DSA:3.40.50.300 1 239 4.1E-57 T 14-10-2018 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 Pfam PF00005 ABC transporter 23 171 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 Pfam PF00005 ABC transporter 276 431 1.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1123 d9c688d109dbb47777e710fe7d52f113 506 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0383 5de00328174d7a48f9762eceedf01889 270 Gene3D G3DSA:2.60.200.30 107 244 1.2E-89 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 llmg_0383 5de00328174d7a48f9762eceedf01889 270 Gene3D G3DSA:3.40.50.10330 21 266 1.2E-89 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 llmg_0383 5de00328174d7a48f9762eceedf01889 270 Hamap MF_00361 NAD kinase [nadK]. 5 267 23.36 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 llmg_0383 5de00328174d7a48f9762eceedf01889 270 Pfam PF01513 ATP-NAD kinase 39 218 9.6E-26 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 llmg_0383 5de00328174d7a48f9762eceedf01889 270 SUPERFAMILY SSF111331 25 265 3.01E-59 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily llmg_1961 05379f43141d249c97f2cd5d53f3919b 218 Gene3D G3DSA:1.20.910.10 1 217 3.7E-53 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 llmg_1961 05379f43141d249c97f2cd5d53f3919b 218 Pfam PF03070 TENA/THI-4/PQQC family 12 214 8.4E-40 T 14-10-2018 IPR004305 Thiaminase-2/PQQC llmg_1961 05379f43141d249c97f2cd5d53f3919b 218 SUPERFAMILY SSF48613 3 218 5.64E-62 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 llmg_1961 05379f43141d249c97f2cd5d53f3919b 218 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 13 214 6.3E-51 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 Gene3D G3DSA:3.40.50.150 112 313 6.3E-56 T 14-10-2018 llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 307 33.528 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 307 3.8E-105 T 14-10-2018 llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 SUPERFAMILY SSF53335 64 306 9.71E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 4 300 4.2E-70 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 llmg_0110 4064fa1eaeedc99d48befbf1f802a4ec 317 PIRSF PIRSF000401 2 309 3.7E-114 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 llmg_1962 20e98aedd826813a16840200f5140314 109 SUPERFAMILY SSF161219 14 95 1.28E-17 T 14-10-2018 IPR037274 Zinc finger, CHY-type superfamily GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 llmg_1962 20e98aedd826813a16840200f5140314 109 Pfam PF05495 CHY zinc finger 24 94 3.7E-10 T 14-10-2018 IPR008913 Zinc finger, CHY-type GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 llmg_1962 20e98aedd826813a16840200f5140314 109 PIRSF PIRSF017292 8 109 1.8E-33 T 14-10-2018 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type llmg_0295 4c3d8d4311baa50287ad8958714dd09a 474 Pfam PF14264 Glucosyl transferase GtrII 29 308 3.9E-17 T 14-10-2018 IPR025686 Glucosyl transferase II llmg_2094 35e43cfe313f6f0cd5235c4298efa121 116 Pfam PF05521 Phage head-tail joining protein 11 99 1.8E-8 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor llmg_2094 35e43cfe313f6f0cd5235c4298efa121 116 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 9 110 9.8E-28 T 14-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor llmg_0124 f28ddd15e576e63172ec675457526750 865 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 802 19.032 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 Pfam PF01043 SecA preprotein cross-linking domain 230 351 6.8E-36 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 SMART SM00957 5 395 1.3E-272 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 Gene3D G3DSA:3.40.50.300 410 589 0.0 T 14-10-2018 llmg_0124 f28ddd15e576e63172ec675457526750 865 SUPERFAMILY SSF52540 409 582 3.6E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0124 f28ddd15e576e63172ec675457526750 865 SUPERFAMILY SSF81886 590 851 1.57E-70 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 332 354 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 115 125 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 369 386 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 168 188 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 99 113 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 406 419 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 PRINTS PR00906 SecA protein signature 61 85 3.0E-68 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 Pfam PF02810 SEC-C motif 843 861 3.2E-10 T 14-10-2018 IPR004027 SEC-C motif llmg_0124 f28ddd15e576e63172ec675457526750 865 Pfam PF07517 SecA DEAD-like domain 9 395 1.9E-123 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 Pfam PF07516 SecA Wing and Scaffold domain 588 799 5.5E-54 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 509 1.3E-232 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 llmg_0124 f28ddd15e576e63172ec675457526750 865 SUPERFAMILY SSF52540 9 408 1.5E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0124 f28ddd15e576e63172ec675457526750 865 ProSitePatterns PS01312 SecA family signature. 493 508 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 llmg_0124 f28ddd15e576e63172ec675457526750 865 SUPERFAMILY SSF81767 225 361 4.05E-41 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 Gene3D G3DSA:1.10.3060.10 590 798 0.0 T 14-10-2018 llmg_0124 f28ddd15e576e63172ec675457526750 865 Gene3D G3DSA:3.90.1440.10 227 361 0.0 T 14-10-2018 llmg_0124 f28ddd15e576e63172ec675457526750 865 Gene3D G3DSA:3.40.50.300 14 409 0.0 T 14-10-2018 llmg_0124 f28ddd15e576e63172ec675457526750 865 SMART SM00958 226 351 8.0E-64 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 llmg_0124 f28ddd15e576e63172ec675457526750 865 Gene3D G3DSA:1.10.1200.230 641 725 0.0 T 14-10-2018 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 126 26.582 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 Gene3D G3DSA:3.90.1030.10 1 126 3.3E-48 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 SUPERFAMILY SSF64263 2 126 5.62E-42 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 126 1.5E-45 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 Pfam PF01196 Ribosomal protein L17 16 126 3.0E-38 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2353 d7e06244517011d302a674fb7aa2a75a 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 PIRSF PIRSF001594 1 1137 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF51230 1060 1136 3.14E-20 T 14-10-2018 IPR011053 Single hybrid motif llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF51569 517 828 5.13E-82 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:2.40.50.100 1060 1137 7.8E-23 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 1.6E-77 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:1.10.10.2790 935 970 1.1E-271 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:3.10.600.10 501 1052 1.1E-271 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 7.8E-33 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF51246 335 452 3.45E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:1.10.472.90 810 934 1.1E-271 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:3.20.20.70 505 809 1.1E-271 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Gene3D G3DSA:3.30.470.130 1 454 1.5E-185 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF56059 83 346 1.7E-66 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 2.0E-38 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF00364 Biotin-requiring enzyme 1070 1136 7.0E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF52440 1 111 2.09E-39 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF02436 Conserved carboxylase domain 820 1019 6.8E-72 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SMART SM00878 339 446 2.7E-51 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 SUPERFAMILY SSF89000 825 1002 7.85E-54 T 14-10-2018 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 3 1136 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 llmg_0634 a58b2a5667a70129600bcd6ed2386f82 1137 Pfam PF00682 HMGL-like 525 796 2.5E-26 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 SUPERFAMILY SSF51338 1 421 3.09E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 Gene3D G3DSA:2.30.40.10 9 419 4.9E-125 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 SUPERFAMILY SSF51556 55 365 1.26E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 Gene3D G3DSA:3.20.20.140 56 367 4.9E-125 T 14-10-2018 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 ProSitePatterns PS00482 Dihydroorotase signature 1. 58 66 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 422 1.1E-113 T 14-10-2018 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 422 42.197 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 Pfam PF01979 Amidohydrolase family 52 419 9.4E-29 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 llmg_1508 96a6fa0c1b645d8744277cd6be8afa9d 423 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0529 b2187a0e2a242c87457aa260bd81e5db 156 Pfam PF02082 Transcriptional regulator 1 83 7.0E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type llmg_0529 b2187a0e2a242c87457aa260bd81e5db 156 SUPERFAMILY SSF46785 2 139 4.68E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0529 b2187a0e2a242c87457aa260bd81e5db 156 Gene3D G3DSA:1.10.10.10 1 147 1.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0529 b2187a0e2a242c87457aa260bd81e5db 156 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 136 2.5E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type llmg_0529 b2187a0e2a242c87457aa260bd81e5db 156 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 SUPERFAMILY SSF52540 1 159 6.74E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 ProSitePatterns PS01128 Shikimate kinase signature. 52 76 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 Hamap MF_00109 Shikimate kinase [aroK]. 1 160 22.029 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 PRINTS PR01100 Shikimate kinase family signature 89 106 1.5E-23 T 14-10-2018 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 PRINTS PR01100 Shikimate kinase family signature 23 36 1.5E-23 T 14-10-2018 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 PRINTS PR01100 Shikimate kinase family signature 68 77 1.5E-23 T 14-10-2018 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 PRINTS PR01100 Shikimate kinase family signature 3 18 1.5E-23 T 14-10-2018 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 PRINTS PR01100 Shikimate kinase family signature 51 59 1.5E-23 T 14-10-2018 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 Pfam PF01202 Shikimate kinase 9 158 2.4E-37 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 llmg_1925 7b96adad183ebd8f22ebd5d19dbb5e3a 162 Gene3D G3DSA:3.40.50.300 1 161 3.6E-48 T 14-10-2018 llmg_0162 ecdbe8112e11e6fc4c62e1213960fa91 466 Gene3D G3DSA:2.60.40.1280 221 357 5.7E-21 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 llmg_0162 ecdbe8112e11e6fc4c62e1213960fa91 466 Pfam PF05737 Collagen binding domain 360 464 2.7E-26 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 llmg_0162 ecdbe8112e11e6fc4c62e1213960fa91 466 SUPERFAMILY SSF49401 215 354 4.31E-26 T 14-10-2018 IPR008966 Adhesion domain superfamily llmg_0162 ecdbe8112e11e6fc4c62e1213960fa91 466 SUPERFAMILY SSF49401 358 464 2.98E-17 T 14-10-2018 IPR008966 Adhesion domain superfamily llmg_0564 71e02f357750a2e7a4c1aa0d069142df 200 Gene3D G3DSA:1.10.530.10 28 192 3.2E-37 T 14-10-2018 llmg_0564 71e02f357750a2e7a4c1aa0d069142df 200 Pfam PF13702 Lysozyme-like 29 191 3.0E-53 T 14-10-2018 llmg_0564 71e02f357750a2e7a4c1aa0d069142df 200 SUPERFAMILY SSF53955 34 149 7.87E-8 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_2177 5ef79b601f6a1f0c3d9fbea785c41c34 379 Gene3D G3DSA:1.20.1530.20 1 379 1.5E-96 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily llmg_2177 5ef79b601f6a1f0c3d9fbea785c41c34 379 Pfam PF00999 Sodium/hydrogen exchanger family 9 375 3.4E-81 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 SMART SM00857 2 138 1.1E-58 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 SUPERFAMILY SSF53041 2 137 3.66E-43 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 SUPERFAMILY SSF46689 140 181 2.15E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 Pfam PF00239 Resolvase, N terminal domain 3 137 2.0E-44 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 Pfam PF02796 Helix-turn-helix domain of resolvase 140 183 1.1E-13 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 Gene3D G3DSA:3.40.50.1390 1 127 1.8E-47 T 14-10-2018 llmg_0711 aa2fd535ee4c78d873f4650d7d8151a3 184 Gene3D G3DSA:1.10.10.60 140 183 1.8E-6 T 14-10-2018 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 SUPERFAMILY SSF56059 104 300 2.65E-53 T 14-10-2018 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 SUPERFAMILY SSF52440 5 102 1.44E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 8 354 39.502 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 Pfam PF02222 ATP-grasp domain 115 279 6.2E-46 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 SUPERFAMILY SSF51246 303 367 5.73E-15 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 Gene3D G3DSA:3.40.50.20 2 113 1.7E-41 T 14-10-2018 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 8 358 2.7E-105 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 Gene3D G3DSA:3.30.470.20 181 368 7.5E-66 T 14-10-2018 llmg_1000 1a48efc2a1c6f8870b1a40a7ab4725af 368 Gene3D G3DSA:3.30.1490.20 115 180 2.0E-16 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 Gene3D G3DSA:3.40.50.1000 368 616 5.8E-78 T 14-10-2018 IPR023214 HAD superfamily llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 151 644 7.5E-86 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 Pfam PF00122 E1-E2 ATPase 188 348 7.2E-44 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 SUPERFAMILY SSF81665 135 679 4.45E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 597 622 2.6E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 566 582 2.6E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 539 555 2.6E-8 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 Gene3D G3DSA:3.40.1110.10 384 499 5.8E-78 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 224 238 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 524 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 492 503 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 373 387 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 566 585 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 589 601 7.2E-26 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 Gene3D G3DSA:2.70.150.20 166 278 1.6E-30 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 SUPERFAMILY SSF56784 373 673 4.12E-51 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 134 674 6.7E-112 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 95 676 8.0E-176 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 579 3.5E-37 T 14-10-2018 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 113 673 4.0E-164 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 llmg_1694 43c72e17b140b0c9c2f9a62736537b3b 680 SUPERFAMILY SSF81653 191 274 4.45E-20 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 Gene3D G3DSA:3.40.50.300 131 310 9.2E-67 T 14-10-2018 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 SUPERFAMILY SSF75138 3 131 6.54E-35 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 301 8.2E-107 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 1.4E-69 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 SUPERFAMILY SSF53795 132 298 4.88E-35 T 14-10-2018 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 Pfam PF02603 HPr Serine kinase N terminus 3 127 3.0E-37 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 2 306 40.125 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 llmg_0582 9f1f5f3ca867e17c60c5eacb35f39d50 310 Gene3D G3DSA:3.40.1390.20 2 130 4.9E-36 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily llmg_1834 df94559f2bc20ed3d3ce604cad107768 136 SUPERFAMILY SSF54637 30 133 8.87E-17 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_1834 df94559f2bc20ed3d3ce604cad107768 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 33 126 7.7E-14 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 llmg_1834 df94559f2bc20ed3d3ce604cad107768 136 Pfam PF03061 Thioesterase superfamily 44 119 1.3E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 llmg_1834 df94559f2bc20ed3d3ce604cad107768 136 Gene3D G3DSA:3.10.129.10 1 136 2.7E-60 T 14-10-2018 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 1.9E-172 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.015 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Gene3D G3DSA:3.40.50.300 169 351 2.3E-51 T 14-10-2018 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Gene3D G3DSA:3.30.300.20 353 436 2.9E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 SUPERFAMILY SSF52540 138 435 2.15E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 SUPERFAMILY SSF52540 4 169 5.34E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Gene3D G3DSA:3.40.50.300 2 163 2.9E-46 T 14-10-2018 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 4.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 6.6E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 7.9E-33 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 177 197 7.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 7.6E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 344 9.7E-26 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 145 5.0E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_1805 21d06ed307f2354aa189b8665e4017e0 436 PIRSF PIRSF006485 2 436 2.4E-168 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 llmg_0444 7c52a422560af10bbb088ed74276da04 686 SUPERFAMILY SSF50249 307 387 1.44E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0444 7c52a422560af10bbb088ed74276da04 686 Hamap MF_01588 DNA ligase [ligA]. 1 686 48.59 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 SMART SM00532 2 469 3.7E-230 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 429 455 4.1E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:2.40.50.140 309 394 2.2E-27 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:1.10.150.20 526 606 1.7E-19 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 311 386 7.2E-30 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 111 140 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF14520 Helix-hairpin-helix domain 467 521 0.001 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 389 4.0E-147 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:3.30.470.90 68 308 9.3E-92 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 613 686 6.1E-15 T 14-10-2018 IPR001357 BRCT domain llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:2.20.70.80 415 453 2.3E-7 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 PIRSF PIRSF001604 1 395 1.1E-148 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 PIRSF PIRSF001604 410 686 1.0E-85 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:1.10.150.20 454 525 3.7E-25 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF12826 Helix-hairpin-helix motif 531 593 8.7E-20 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 SUPERFAMILY SSF47781 426 606 5.19E-56 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_0444 7c52a422560af10bbb088ed74276da04 686 SMART SM00292 613 686 6.4E-11 T 14-10-2018 IPR001357 BRCT domain llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:1.10.287.610 1 67 1.1E-22 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 2 308 4.8E-118 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 llmg_0444 7c52a422560af10bbb088ed74276da04 686 SUPERFAMILY SSF56091 2 308 4.0E-113 T 14-10-2018 llmg_0444 7c52a422560af10bbb088ed74276da04 686 Gene3D G3DSA:3.40.50.10190 609 686 4.5E-26 T 14-10-2018 IPR036420 BRCT domain superfamily llmg_0444 7c52a422560af10bbb088ed74276da04 686 SUPERFAMILY SSF52113 614 685 1.25E-18 T 14-10-2018 IPR036420 BRCT domain superfamily llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 SUPERFAMILY SSF52540 4 254 2.18E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 Gene3D G3DSA:3.40.50.300 1 310 4.0E-81 T 14-10-2018 llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 SMART SM00382 40 232 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 Pfam PF00005 ABC transporter 32 182 9.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0698 fc1243fd60e206fab3710bbeef8f25ee 319 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 272 1.7E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Pfam PF00689 Cation transporting ATPase, C-terminus 712 887 6.6E-39 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 332 338 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 SUPERFAMILY SSF81660 336 535 1.68E-40 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Gene3D G3DSA:1.20.1110.10 54 885 3.7E-261 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 SUPERFAMILY SSF81653 119 229 4.58E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Pfam PF00702 haloacid dehalogenase-like hydrolase 328 641 2.1E-22 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Pfam PF00690 Cation transporter/ATPase, N-terminus 7 71 4.0E-9 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Pfam PF00122 E1-E2 ATPase 115 310 1.8E-52 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Gene3D G3DSA:2.70.150.10 16 232 3.7E-261 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 SMART SM00831 2 76 1.7E-4 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 88 352 2.5E-41 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 597 714 5.0E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Gene3D G3DSA:3.40.50.1000 327 672 3.7E-261 T 14-10-2018 IPR023214 HAD superfamily llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 SUPERFAMILY SSF56784 328 730 3.43E-58 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 802 823 2.6E-17 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 485 503 2.6E-17 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 599 615 2.6E-17 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 627 643 2.6E-17 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 659 684 2.6E-17 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 SUPERFAMILY SSF81665 4 890 1.7E-112 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 651 663 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 180 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 557 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 646 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 330 344 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 525 536 9.1E-40 T 14-10-2018 llmg_2541 54c1d8dc942891224f922ab005dc02cc 897 Gene3D G3DSA:3.40.1110.10 340 532 3.7E-261 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 SUPERFAMILY SSF52283 32 110 1.1E-16 T 14-10-2018 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 51 308 3.6E-16 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 Gene3D G3DSA:3.40.50.720 33 304 3.0E-70 T 14-10-2018 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 142 169 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 SUPERFAMILY SSF55021 310 392 1.5E-11 T 14-10-2018 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 Gene3D G3DSA:3.30.70.260 310 392 1.2E-13 T 14-10-2018 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 Gene3D G3DSA:3.40.50.720 86 280 3.0E-70 T 14-10-2018 llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 SUPERFAMILY SSF51735 88 277 1.1E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0566 901b69646ce8ba6990e731ca72f48e3d 398 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 95 276 1.0E-42 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 llmg_2198 b9c103a529cfc51d28d2b6f342ecfe4d 179 Pfam PF10400 Virulence activator alpha C-term 98 178 4.3E-16 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal llmg_2198 b9c103a529cfc51d28d2b6f342ecfe4d 179 Gene3D G3DSA:1.10.10.10 6 93 5.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2198 b9c103a529cfc51d28d2b6f342ecfe4d 179 SUPERFAMILY SSF46785 7 178 4.02E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2198 b9c103a529cfc51d28d2b6f342ecfe4d 179 Pfam PF03551 Transcriptional regulator PadR-like family 11 82 2.2E-13 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal llmg_2412 22405b714e7b069f691ac78dd11221be 616 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 94 492 5.9E-55 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2412 22405b714e7b069f691ac78dd11221be 616 SUPERFAMILY SSF55826 256 423 2.35E-31 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Gene3D G3DSA:3.30.930.10 420 496 1.7E-10 T 14-10-2018 llmg_2412 22405b714e7b069f691ac78dd11221be 616 SUPERFAMILY SSF52954 512 612 1.42E-27 T 14-10-2018 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Gene3D G3DSA:3.40.50.800 507 616 4.2E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily llmg_2412 22405b714e7b069f691ac78dd11221be 616 Pfam PF03129 Anticodon binding domain 524 611 2.3E-19 T 14-10-2018 IPR004154 Anticodon-binding llmg_2412 22405b714e7b069f691ac78dd11221be 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.2E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 llmg_2412 22405b714e7b069f691ac78dd11221be 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.2E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 llmg_2412 22405b714e7b069f691ac78dd11221be 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.2E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 llmg_2412 22405b714e7b069f691ac78dd11221be 616 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.2E-15 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 llmg_2412 22405b714e7b069f691ac78dd11221be 616 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 254 612 1.8E-100 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 215 1.2E-99 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 616 38.738 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Pfam PF04073 Aminoacyl-tRNA editing domain 295 412 3.0E-26 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Gene3D G3DSA:3.90.960.10 281 419 1.6E-44 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_2412 22405b714e7b069f691ac78dd11221be 616 SUPERFAMILY SSF55681 9 524 1.18E-85 T 14-10-2018 llmg_2412 22405b714e7b069f691ac78dd11221be 616 Gene3D G3DSA:3.30.930.10 1 236 5.2E-58 T 14-10-2018 llmg_0748 196d7e3d61c651f4863300d652c35439 456 SMART SM00388 222 289 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0748 196d7e3d61c651f4863300d652c35439 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 442 1.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_0748 196d7e3d61c651f4863300d652c35439 456 SUPERFAMILY SSF47384 210 289 1.06E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_0748 196d7e3d61c651f4863300d652c35439 456 Gene3D G3DSA:3.30.565.10 296 448 9.4E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0748 196d7e3d61c651f4863300d652c35439 456 SUPERFAMILY SSF55874 300 440 2.62E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0748 196d7e3d61c651f4863300d652c35439 456 SMART SM00387 332 444 6.8E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_0748 196d7e3d61c651f4863300d652c35439 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 9.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0748 196d7e3d61c651f4863300d652c35439 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 383 9.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0748 196d7e3d61c651f4863300d652c35439 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 422 9.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0748 196d7e3d61c651f4863300d652c35439 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 397 9.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0748 196d7e3d61c651f4863300d652c35439 456 Gene3D G3DSA:1.10.287.130 209 289 4.5E-13 T 14-10-2018 llmg_0748 196d7e3d61c651f4863300d652c35439 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 289 2.0E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 4 21 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 171 184 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 34 45 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 149 160 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 79 94 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 PRINTS PR00988 Uridine kinase signature 135 145 8.8E-39 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 TIGRFAM TIGR00235 udk: uridine kinase 2 204 9.4E-88 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 Gene3D G3DSA:3.40.50.300 1 206 1.9E-62 T 14-10-2018 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 189 1.6E-48 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 Hamap MF_00551 Uridine kinase [udk]. 1 205 42.105 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 llmg_0762 e745b2d37a1c67164a81a6382b2d9db6 206 SUPERFAMILY SSF52540 2 196 4.8E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2082 487636d6e2c8a5ab36f58d35029af764 285 Gene3D G3DSA:3.20.20.80 1 212 1.5E-41 T 14-10-2018 llmg_2082 487636d6e2c8a5ab36f58d35029af764 285 Pfam PF01183 Glycosyl hydrolases family 25 4 181 1.5E-34 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 llmg_2082 487636d6e2c8a5ab36f58d35029af764 285 SUPERFAMILY SSF51445 2 204 9.13E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_2082 487636d6e2c8a5ab36f58d35029af764 285 SMART SM00641 1 100 7.1E-34 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 423 2.2E-114 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 Gene3D G3DSA:3.65.10.10 20 229 1.4E-152 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 PIRSF PIRSF000505 1 430 4.4E-116 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 SUPERFAMILY SSF55205 3 426 4.91E-132 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 Gene3D G3DSA:3.65.10.10 11 423 1.4E-152 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 427 2.8E-128 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 llmg_1926 e1bdbf33a657690003a1e7efcb5e5fa8 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 429 34.209 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 Gene3D G3DSA:3.30.700.10 32 91 7.9E-9 T 14-10-2018 llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 PRINTS PR00813 Bacterial general secretion pathway protein G signature 67 85 3.7E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 PRINTS PR00813 Bacterial general secretion pathway protein G signature 31 56 3.7E-9 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 29 50 5.5E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 Pfam PF07963 Prokaryotic N-terminal methylation motif 27 50 1.4E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 SUPERFAMILY SSF54523 32 120 2.43E-14 T 14-10-2018 llmg_2406 b5ce3f5db21a7d794d4527a6cbe202a9 125 PIRSF PIRSF029928 17 125 2.7E-42 T 14-10-2018 IPR016940 ComG operon protein C GO:0030420 llmg_1098 d04f220257d4669b645b861700dd4efe 525 Gene3D G3DSA:3.50.50.60 18 379 3.8E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 93 105 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 333 339 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 42 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 7.0E-27 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 Pfam PF01266 FAD dependent oxidoreductase 20 377 3.7E-48 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 llmg_1098 d04f220257d4669b645b861700dd4efe 525 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 Gene3D G3DSA:3.30.9.10 101 340 3.8E-130 T 14-10-2018 llmg_1098 d04f220257d4669b645b861700dd4efe 525 Gene3D G3DSA:1.10.8.870 398 521 3.4E-29 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 399 506 3.3E-25 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 llmg_1098 d04f220257d4669b645b861700dd4efe 525 SUPERFAMILY SSF51905 19 342 1.24E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0210 14877ba2a5a912e3c767d608a24f34d4 299 Gene3D G3DSA:3.40.50.720 2 270 1.5E-101 T 14-10-2018 llmg_0210 14877ba2a5a912e3c767d608a24f34d4 299 SUPERFAMILY SSF51735 2 281 6.77E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0210 14877ba2a5a912e3c767d608a24f34d4 299 Gene3D G3DSA:3.90.25.10 161 276 1.5E-101 T 14-10-2018 llmg_0210 14877ba2a5a912e3c767d608a24f34d4 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 281 1.6E-75 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 llmg_0210 14877ba2a5a912e3c767d608a24f34d4 299 Pfam PF04321 RmlD substrate binding domain 2 282 4.0E-105 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 201 3.8E-69 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 Pfam PF01470 Pyroglutamyl peptidase 1 201 7.9E-95 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 40.638 T 14-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 4.4E-47 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 4.4E-47 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 4.4E-47 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 4.4E-47 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 4.4E-47 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 Gene3D G3DSA:3.40.630.20 1 213 1.3E-74 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 PIRSF PIRSF015592 1 213 1.9E-81 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 SUPERFAMILY SSF53182 1 204 1.22E-66 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 llmg_0663 89f2ab645100d15c87830d3d914dc7c8 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 14-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 llmg_1009 7ddc100025ec57cfd3896da36c552a52 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 282 7.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1009 7ddc100025ec57cfd3896da36c552a52 296 SUPERFAMILY SSF161098 53 281 3.14E-50 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1009 7ddc100025ec57cfd3896da36c552a52 296 Gene3D G3DSA:1.10.3720.10 49 296 2.2E-60 T 14-10-2018 IPR035906 MetI-like superfamily llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 Pfam PF00092 von Willebrand factor type A domain 305 430 3.7E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 Gene3D G3DSA:3.40.50.410 296 562 2.4E-41 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 Gene3D G3DSA:2.60.40.2110 581 671 1.2E-16 T 14-10-2018 llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 Gene3D G3DSA:2.60.40.10 882 979 9.0E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 SMART SM00327 303 538 5.1E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 Gene3D G3DSA:2.60.40.10 746 862 3.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_2320 51b3b1056030c02a8e308b3538b08825 1444 SUPERFAMILY SSF53300 300 507 2.72E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 239 254 2.8E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 390 409 2.8E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 2.8E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 2.8E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 311 327 2.8E-33 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 670 26.293 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 SUPERFAMILY SSF109604 332 499 9.81E-17 T 14-10-2018 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 670 1.9E-202 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_1477 e78bf56bcb5350d64c182775ba30b686 673 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 537 4.8E-190 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 SUPERFAMILY SSF63737 5 187 3.4E-36 T 14-10-2018 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 SUPERFAMILY SSF55486 195 445 8.79E-78 T 14-10-2018 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 Gene3D G3DSA:1.25.50.20 524 845 4.3E-45 T 14-10-2018 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 Pfam PF01433 Peptidase family M1 domain 198 434 5.9E-90 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 Gene3D G3DSA:1.10.390.60 191 458 6.6E-91 T 14-10-2018 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 Pfam PF11838 ERAP1-like C-terminal domain 509 821 2.2E-44 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 Gene3D G3DSA:2.60.40.1730 2 187 4.4E-39 T 14-10-2018 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 285 300 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 170 185 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 249 259 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_0319 a97183f5c5dede3bf21dac05b668e539 846 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 304 316 1.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Hamap MF_00054_B Elongation factor G [fusA]. 6 704 108.788 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SUPERFAMILY SSF52540 6 295 2.57E-104 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Gene3D G3DSA:3.30.70.870 419 496 2.0E-31 T 14-10-2018 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Gene3D G3DSA:3.40.50.300 1 306 3.7E-107 T 14-10-2018 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Pfam PF00009 Elongation factor Tu GTP binding domain 9 295 1.9E-67 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 704 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SUPERFAMILY SSF54211 492 612 4.8E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Pfam PF00679 Elongation factor G C-terminus 614 699 7.9E-30 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Pfam PF03764 Elongation factor G, domain IV 492 611 1.1E-45 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.5E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.5E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Gene3D G3DSA:2.40.30.10 307 418 1.5E-43 T 14-10-2018 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SUPERFAMILY SSF54980 616 702 3.64E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Gene3D G3DSA:3.30.70.240 617 687 2.6E-90 T 14-10-2018 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Pfam PF14492 Elongation Factor G, domain II 417 490 2.5E-34 T 14-10-2018 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SUPERFAMILY SSF50447 278 415 5.55E-34 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_2556 523b46168110161d850ed8a1e80b2e89 709 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Gene3D G3DSA:3.30.230.10 497 700 2.6E-90 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SMART SM00838 613 700 2.9E-51 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SMART SM00889 493 611 3.9E-70 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 4.9E-40 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 Pfam PF03144 Elongation factor Tu domain 2 337 404 1.8E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 llmg_2556 523b46168110161d850ed8a1e80b2e89 709 SUPERFAMILY SSF54980 417 494 5.4E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 Gene3D G3DSA:1.10.8.660 359 410 1.1E-20 T 14-10-2018 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 4 368 6.3E-101 T 14-10-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 SUPERFAMILY SSF55035 98 205 7.59E-30 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 11 369 1.1E-107 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 Gene3D G3DSA:3.90.770.10 11 356 2.1E-133 T 14-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 354 367 - T 14-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 158 176 2.2E-8 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 40 61 2.2E-8 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 67 87 2.2E-8 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 296 317 2.2E-8 T 14-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 Gene3D G3DSA:3.30.70.420 97 205 2.1E-133 T 14-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0931 75b1f857e3e869fb425e4c1ea9bf3530 410 SUPERFAMILY SSF56542 3 410 2.75E-96 T 14-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 llmg_0700 8eee41ff2c9c98949589a7398d9d68b2 294 Gene3D G3DSA:1.10.3720.10 78 289 2.7E-21 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0700 8eee41ff2c9c98949589a7398d9d68b2 294 SUPERFAMILY SSF161098 85 274 1.01E-20 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0700 8eee41ff2c9c98949589a7398d9d68b2 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 8.4E-34 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SMART SM00487 249 444 9.7E-37 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Pfam PF00271 Helicase conserved C-terminal domain 458 566 1.0E-18 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 24 642 2.8E-239 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SMART SM00490 482 567 9.1E-22 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SMART SM00490 315 385 1.1 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SUPERFAMILY SSF50249 1 161 5.14E-37 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Pfam PF00270 DEAD/DEAH box helicase 257 411 3.2E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Gene3D G3DSA:3.40.50.300 194 428 1.5E-84 T 14-10-2018 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Gene3D G3DSA:2.40.50.140 45 132 3.4E-13 T 14-10-2018 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Gene3D G3DSA:3.40.50.300 435 607 1.5E-55 T 14-10-2018 llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SUPERFAMILY SSF52540 169 430 7.2E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 SUPERFAMILY SSF52540 371 579 2.48E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2523 cda916cd1e622602fccd9ad0dfa090f9 666 Pfam PF17191 RecG wedge domain 7 157 1.8E-16 T 14-10-2018 IPR033454 RecG, wedge domain llmg_1647 22417a611629a04434700b7fb77f5394 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 261 1.5E-53 T 14-10-2018 llmg_1647 22417a611629a04434700b7fb77f5394 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 261 4.6E-49 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1647 22417a611629a04434700b7fb77f5394 268 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 14-10-2018 llmg_1647 22417a611629a04434700b7fb77f5394 268 Gene3D G3DSA:3.30.1240.10 92 190 6.6E-57 T 14-10-2018 llmg_1647 22417a611629a04434700b7fb77f5394 268 Gene3D G3DSA:3.40.50.1000 12 257 6.6E-57 T 14-10-2018 IPR023214 HAD superfamily llmg_1647 22417a611629a04434700b7fb77f5394 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 234 2.1E-19 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_1647 22417a611629a04434700b7fb77f5394 268 SUPERFAMILY SSF56784 5 263 3.72E-60 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 376 3.7E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 SUPERFAMILY SSF51984 10 100 4.45E-17 T 14-10-2018 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 SUPERFAMILY SSF53244 309 448 1.22E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 448 35.417 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Gene3D G3DSA:3.40.50.720 10 94 2.4E-30 T 14-10-2018 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 446 1.2E-125 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Pfam PF08245 Mur ligase middle domain 117 289 9.2E-38 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 SUPERFAMILY SSF53623 103 307 1.96E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Gene3D G3DSA:3.90.190.20 314 447 1.2E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_0912 a670b1b1f409e88c6e537a3e18415926 449 Gene3D G3DSA:3.40.1190.10 102 307 2.5E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 PIRSF PIRSF005700 18 454 4.2E-176 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 Pfam PF03051 Peptidase C1-like family 21 451 5.4E-198 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 SUPERFAMILY SSF54001 19 454 9.83E-120 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 80 91 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 Gene3D G3DSA:3.90.70.10 68 454 6.7E-161 T 14-10-2018 llmg_2069 0ed96e8677dfe19d5087a38d01af47b0 454 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 372 382 - T 14-10-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Gene3D G3DSA:3.30.200.20 1 92 3.3E-29 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Pfam PF00069 Protein kinase domain 12 257 2.5E-53 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Gene3D G3DSA:3.30.10.20 505 571 1.2E-8 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 SMART SM00740 432 504 1.1E-13 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 SMART SM00740 362 430 9.1E-17 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 SMART SM00740 505 571 0.009 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Gene3D G3DSA:1.10.510.10 94 277 3.9E-52 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 SUPERFAMILY SSF56112 8 601 1.04E-78 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily llmg_2079 cb2cae832544c0915b662c054f8592ca 625 SMART SM00220 12 270 6.5E-64 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Gene3D G3DSA:3.30.10.20 436 504 2.6E-12 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 PIRSF PIRSF000654 567 624 2400.0 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 PIRSF PIRSF000654 23 267 8.1E-31 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Gene3D G3DSA:3.30.10.20 363 433 5.1E-18 T 14-10-2018 llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Pfam PF03793 PASTA domain 436 503 3.1E-12 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Pfam PF03793 PASTA domain 509 570 8.8E-8 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 Pfam PF03793 PASTA domain 366 429 5.0E-14 T 14-10-2018 IPR005543 PASTA domain llmg_2079 cb2cae832544c0915b662c054f8592ca 625 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 42 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 llmg_0671 c571aabc05601621abfc56b57ed88d59 58 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 7 21 0.0062 T 14-10-2018 IPR010133 Bacteriocin-type signal sequence llmg_0671 c571aabc05601621abfc56b57ed88d59 58 Pfam PF04369 Lactococcin-like family 1 36 3.1E-8 T 14-10-2018 IPR007464 Bacteriocin, class IId GO:0005576|GO:0042742 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Pfam PF08264 Anticodon-binding domain of tRNA 676 831 1.6E-30 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Gene3D G3DSA:1.10.730.20 631 921 2.4E-88 T 14-10-2018 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 SUPERFAMILY SSF47323 643 920 3.74E-71 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Pfam PF06827 Zinc finger found in FPG and IleRS 886 917 2.9E-8 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 919 20.11 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Gene3D G3DSA:3.40.50.620 24 620 6.1E-253 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Gene3D G3DSA:3.90.740.10 193 397 6.1E-253 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 SUPERFAMILY SSF52374 1 639 7.15E-149 T 14-10-2018 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.6E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 SUPERFAMILY SSF50677 202 392 1.15E-58 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 832 2.6E-289 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 llmg_2053 f97382d6b1cf3f1657ae6a508f6cffab 932 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 6.8E-209 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 24 288 8.9E-80 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 Gene3D G3DSA:3.40.50.150 2 220 2.2E-71 T 14-10-2018 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 SUPERFAMILY SSF53335 21 291 1.24E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 56 83 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 280 4.0E-62 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 SMART SM00650 40 216 1.5E-80 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 Gene3D G3DSA:1.10.8.100 224 291 2.5E-19 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 llmg_1882 1262f2ef9fc1b560ebf9321ec73e5ca7 294 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 24 290 54.104 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 SMART SM00363 93 157 1.3E-20 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 34.877 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 ProSitePatterns PS00632 Ribosomal protein S4 signature. 91 115 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 9.6E-77 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 Gene3D G3DSA:1.10.1050.10 6 201 9.2E-73 T 14-10-2018 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 SMART SM01390 3 92 1.7E-39 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 Pfam PF01479 S4 domain 93 140 6.0E-22 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 Gene3D G3DSA:3.10.290.10 92 186 9.2E-73 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 1.5E-26 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 llmg_0296 08daae08ec3916a321a4b4012381c9e6 203 SUPERFAMILY SSF55174 3 201 1.96E-65 T 14-10-2018 llmg_2493 3bf98d94d1a9269a64a0e8e453fd899e 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_2493 3bf98d94d1a9269a64a0e8e453fd899e 391 Pfam PF00872 Transposase, Mutator family 7 371 1.4E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1319 3bf98d94d1a9269a64a0e8e453fd899e 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1319 3bf98d94d1a9269a64a0e8e453fd899e 391 Pfam PF00872 Transposase, Mutator family 7 371 1.4E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1142 3bf98d94d1a9269a64a0e8e453fd899e 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1142 3bf98d94d1a9269a64a0e8e453fd899e 391 Pfam PF00872 Transposase, Mutator family 7 371 1.4E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1323 3bf98d94d1a9269a64a0e8e453fd899e 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1323 3bf98d94d1a9269a64a0e8e453fd899e 391 Pfam PF00872 Transposase, Mutator family 7 371 1.4E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_0064 3bf98d94d1a9269a64a0e8e453fd899e 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_0064 3bf98d94d1a9269a64a0e8e453fd899e 391 Pfam PF00872 Transposase, Mutator family 7 371 1.4E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 Pfam PF13377 Periplasmic binding protein-like domain 175 320 4.4E-27 T 14-10-2018 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 SUPERFAMILY SSF47413 2 61 9.85E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 SMART SM00354 2 72 1.8E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 SUPERFAMILY SSF53822 58 320 3.85E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0746 9b4b23724773b4204c244d42b515ee04 324 Gene3D G3DSA:1.10.260.40 1 59 3.8E-21 T 14-10-2018 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 Gene3D G3DSA:3.40.50.2300 165 318 4.8E-57 T 14-10-2018 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.0E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0746 9b4b23724773b4204c244d42b515ee04 324 Gene3D G3DSA:3.40.50.2300 76 312 4.8E-57 T 14-10-2018 llmg_0382 10d80074913ad271fb64b0b872ff01b0 219 Gene3D G3DSA:1.10.287.860 146 209 2.4E-24 T 14-10-2018 llmg_0382 10d80074913ad271fb64b0b872ff01b0 219 SUPERFAMILY SSF81301 3 197 1.06E-54 T 14-10-2018 llmg_0382 10d80074913ad271fb64b0b872ff01b0 219 Pfam PF04607 Region found in RelA / SpoT proteins 43 160 8.0E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_0382 10d80074913ad271fb64b0b872ff01b0 219 SMART SM00954 43 163 1.9E-41 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_0382 10d80074913ad271fb64b0b872ff01b0 219 Gene3D G3DSA:3.30.460.10 1 144 4.5E-48 T 14-10-2018 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 156 165 6.0E-11 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 379 401 6.0E-11 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 297 315 6.0E-11 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 6.0E-11 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 281 369 1.4E-21 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 1.5E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 369 382 1.5E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 1.5E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 270 289 1.5E-11 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 SUPERFAMILY SSF51419 19 282 2.78E-57 T 14-10-2018 IPR029066 PLP-binding barrel llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 Gene3D G3DSA:2.40.37.10 10 409 2.9E-105 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 SUPERFAMILY SSF50621 255 410 9.42E-44 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 30 279 1.4E-30 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 410 9.2E-90 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_1185 e0b784df8cc441d9e67692a3750d1962 419 Gene3D G3DSA:3.20.20.10 27 275 2.9E-105 T 14-10-2018 IPR029066 PLP-binding barrel llmg_0826 c02e91d3bbe216652aec809f7e99a531 502 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 22 440 1.2E-108 T 14-10-2018 IPR021145 Portal protein llmg_0826 c02e91d3bbe216652aec809f7e99a531 502 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 15 436 2.2E-112 T 14-10-2018 IPR006428 Portal protein, SPP1-type llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 SMART SM00382 29 223 4.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 1.4E-88 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 Gene3D G3DSA:3.40.50.300 3 226 4.8E-67 T 14-10-2018 llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 SUPERFAMILY SSF52540 3 221 3.99E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1546 1830248a1fe0596f764d9717095b6ac7 230 Pfam PF00005 ABC transporter 20 167 6.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2436 c3a1f82f699c896ab8a54cb877d2f64c 275 Pfam PF13353 4Fe-4S single cluster domain 14 94 1.1E-9 T 14-10-2018 llmg_2436 c3a1f82f699c896ab8a54cb877d2f64c 275 SUPERFAMILY SSF102114 10 240 1.44E-34 T 14-10-2018 llmg_2436 c3a1f82f699c896ab8a54cb877d2f64c 275 Gene3D G3DSA:3.20.20.70 10 273 2.0E-34 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_2436 c3a1f82f699c896ab8a54cb877d2f64c 275 SMART SM00729 11 208 0.0044 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 llmg_2436 c3a1f82f699c896ab8a54cb877d2f64c 275 Pfam PF04055 Radical SAM superfamily 17 153 4.0E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_1881 76eee79556d78d76f9623438633ae5a7 352 Pfam PF01321 Creatinase/Prolidase N-terminal domain 2 125 1.2E-21 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 llmg_1881 76eee79556d78d76f9623438633ae5a7 352 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 281 293 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site llmg_1881 76eee79556d78d76f9623438633ae5a7 352 Gene3D G3DSA:3.40.350.10 1 125 8.4E-31 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_1881 76eee79556d78d76f9623438633ae5a7 352 Gene3D G3DSA:3.90.230.10 126 352 1.5E-82 T 14-10-2018 llmg_1881 76eee79556d78d76f9623438633ae5a7 352 SUPERFAMILY SSF53092 9 125 2.09E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_1881 76eee79556d78d76f9623438633ae5a7 352 SUPERFAMILY SSF55920 125 352 4.71E-77 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like llmg_1881 76eee79556d78d76f9623438633ae5a7 352 Pfam PF00557 Metallopeptidase family M24 133 336 2.4E-63 T 14-10-2018 IPR000994 Peptidase M24 llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 SMART SM00490 255 336 1.9E-27 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 SUPERFAMILY SSF52540 69 357 1.55E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 Gene3D G3DSA:3.40.50.300 1 204 3.3E-63 T 14-10-2018 llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 SMART SM00487 20 219 1.9E-48 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 1 434 51.351 T 14-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 Pfam PF00270 DEAD/DEAH box helicase 25 190 8.2E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 Gene3D G3DSA:3.40.50.300 205 445 2.5E-42 T 14-10-2018 llmg_0433 f5fa66c46e61955943f9c1f95c4a024d 446 Pfam PF00271 Helicase conserved C-terminal domain 233 336 8.4E-24 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0268 a35b349330e9c401f70548f35f880302 593 SMART SM00382 358 545 9.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0268 a35b349330e9c401f70548f35f880302 593 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0268 a35b349330e9c401f70548f35f880302 593 Pfam PF00005 ABC transporter 349 495 6.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0268 a35b349330e9c401f70548f35f880302 593 SUPERFAMILY SSF52540 327 569 5.55E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0268 a35b349330e9c401f70548f35f880302 593 Gene3D G3DSA:3.40.50.300 323 580 1.8E-71 T 14-10-2018 llmg_0268 a35b349330e9c401f70548f35f880302 593 Gene3D G3DSA:1.20.1560.10 3 312 2.1E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0268 a35b349330e9c401f70548f35f880302 593 Pfam PF00664 ABC transporter transmembrane region 15 285 3.1E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_0268 a35b349330e9c401f70548f35f880302 593 SUPERFAMILY SSF90123 11 312 2.88E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 180 468 4.3E-135 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 358 380 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 169 197 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 251 278 1.6E-87 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 Gene3D G3DSA:3.40.50.720 1 181 3.8E-55 T 14-10-2018 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 Gene3D G3DSA:1.20.5.320 437 472 4.8E-22 T 14-10-2018 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 172 2.4E-48 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 7.7E-219 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 Gene3D G3DSA:1.10.1040.10 182 436 2.7E-117 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 SUPERFAMILY SSF48179 178 471 1.9E-132 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 PIRSF PIRSF000109 1 472 1.3E-242 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 255 267 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 SMART SM01350 180 469 1.0E-223 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_0586 03f252604e4e2138efe1968bb4414f85 472 SUPERFAMILY SSF51735 4 167 1.65E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0324 8db6738680682fe54675e9988a051e3b 579 Pfam PF00005 ABC transporter 355 504 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0324 8db6738680682fe54675e9988a051e3b 579 SUPERFAMILY SSF90123 2 321 1.57E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0324 8db6738680682fe54675e9988a051e3b 579 Gene3D G3DSA:1.20.1560.10 1 322 5.0E-62 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0324 8db6738680682fe54675e9988a051e3b 579 SMART SM00382 364 550 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0324 8db6738680682fe54675e9988a051e3b 579 SUPERFAMILY SSF52540 333 574 1.13E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0324 8db6738680682fe54675e9988a051e3b 579 Pfam PF00664 ABC transporter transmembrane region 14 292 3.3E-29 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_0324 8db6738680682fe54675e9988a051e3b 579 Gene3D G3DSA:3.40.50.300 334 579 2.6E-78 T 14-10-2018 llmg_1133 a915c8355f3a59f31da6926d8b8dbc6e 1046 Gene3D G3DSA:3.40.50.300 824 1045 1.6E-22 T 14-10-2018 llmg_1133 a915c8355f3a59f31da6926d8b8dbc6e 1046 Pfam PF13558 Putative exonuclease SbcCD, C subunit 914 1004 6.5E-14 T 14-10-2018 llmg_1133 a915c8355f3a59f31da6926d8b8dbc6e 1046 Pfam PF13476 AAA domain 6 212 9.5E-21 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain llmg_1133 a915c8355f3a59f31da6926d8b8dbc6e 1046 SUPERFAMILY SSF52540 21 1031 6.47E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1133 a915c8355f3a59f31da6926d8b8dbc6e 1046 Gene3D G3DSA:3.40.50.300 1 237 3.5E-35 T 14-10-2018 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 406 160.678 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 Gene3D G3DSA:3.40.50.620 177 406 4.5E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 Gene3D G3DSA:3.30.2130.30 1 176 3.5E-57 T 14-10-2018 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 SMART SM00981 76 167 1.8E-21 T 14-10-2018 IPR004114 THUMP domain GO:0003723 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 177 372 1.9E-60 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 SUPERFAMILY SSF52402 177 389 8.6E-49 T 14-10-2018 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 Pfam PF02926 THUMP domain 32 165 3.3E-22 T 14-10-2018 IPR004114 THUMP domain GO:0003723 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 8 374 6.5E-117 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 llmg_0395 e336be8f310b502288e6aa0c4fb9f08e 406 SUPERFAMILY SSF143437 5 175 5.06E-54 T 14-10-2018 llmg_0323 77112724e1af6cd7b40cf57b3aa53751 116 SUPERFAMILY SSF46785 7 104 7.21E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0323 77112724e1af6cd7b40cf57b3aa53751 116 Pfam PF03551 Transcriptional regulator PadR-like family 17 90 5.0E-25 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal llmg_0323 77112724e1af6cd7b40cf57b3aa53751 116 Gene3D G3DSA:1.10.10.10 1 116 2.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 SUPERFAMILY SSF56235 23 432 1.35E-137 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 SUPERFAMILY SSF51395 449 1186 3.39E-230 T 14-10-2018 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Pfam PF01645 Conserved region in glutamate synthase 791 1156 4.1E-149 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Pfam PF00310 Glutamine amidotransferases class-II 23 430 1.2E-163 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 SUPERFAMILY SSF69336 1207 1461 2.09E-82 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Gene3D G3DSA:2.160.20.60 1208 1472 2.0E-97 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Pfam PF04898 Glutamate synthase central domain 459 731 4.6E-96 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Gene3D G3DSA:3.20.20.70 484 1172 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Gene3D G3DSA:3.60.20.10 23 546 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Pfam PF01493 GXGXG motif 1229 1414 2.7E-70 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 llmg_1183 0c36faeefa23f867c2329dfe501eb6a3 1489 Gene3D G3DSA:3.20.20.70 435 789 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1845 c6de9d56b010f13d0385bf6c7e3cb75f 250 SUPERFAMILY SSF56281 1 237 1.97E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_1845 c6de9d56b010f13d0385bf6c7e3cb75f 250 Pfam PF12706 Beta-lactamase superfamily domain 31 215 2.1E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_1845 c6de9d56b010f13d0385bf6c7e3cb75f 250 Gene3D G3DSA:3.60.15.10 1 243 4.3E-65 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_1845 c6de9d56b010f13d0385bf6c7e3cb75f 250 SMART SM00849 18 215 3.5E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 SUPERFAMILY SSF55811 11 145 2.3E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 Gene3D G3DSA:3.90.79.10 3 146 1.6E-33 T 14-10-2018 llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 Pfam PF00293 NUDIX domain 21 135 2.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 PRINTS PR00502 NUDIX hydrolase family signature 43 57 1.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 PRINTS PR00502 NUDIX hydrolase family signature 57 72 1.1E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_2510 9bcc81f6d248d8086631d7dee9b9c104 146 ProSitePatterns PS00893 Nudix box signature. 48 69 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 5 275 22.709 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 5 271 4.2E-54 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 Gene3D G3DSA:3.40.1190.20 3 275 6.0E-73 T 14-10-2018 IPR029056 Ribokinase-like llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 95 105 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 Pfam PF01256 Carbohydrate kinase 28 267 1.0E-57 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 211 221 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site llmg_0266 30e24b766adbfd53612bf6a6f53c8d2a 276 SUPERFAMILY SSF53613 3 272 3.93E-61 T 14-10-2018 IPR029056 Ribokinase-like llmg_2381 202ab76aafbc4dc0de8608fdf576ad5f 97 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 22.232 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 llmg_2381 202ab76aafbc4dc0de8608fdf576ad5f 97 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 14-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2381 202ab76aafbc4dc0de8608fdf576ad5f 97 SUPERFAMILY SSF54189 1 92 3.96E-31 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2381 202ab76aafbc4dc0de8608fdf576ad5f 97 Pfam PF00276 Ribosomal protein L23 5 88 5.2E-31 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 llmg_2381 202ab76aafbc4dc0de8608fdf576ad5f 97 Gene3D G3DSA:3.30.70.330 1 93 9.0E-32 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily llmg_1297 8c0b27750e90888e24405b3cc82bb883 318 Pfam PF13393 Histidyl-tRNA synthetase 22 311 2.6E-56 T 14-10-2018 llmg_1297 8c0b27750e90888e24405b3cc82bb883 318 SUPERFAMILY SSF55681 19 312 6.17E-47 T 14-10-2018 llmg_1297 8c0b27750e90888e24405b3cc82bb883 318 Gene3D G3DSA:3.30.930.10 6 318 3.8E-64 T 14-10-2018 llmg_1297 8c0b27750e90888e24405b3cc82bb883 318 PIRSF PIRSF001549 9 318 1.9E-51 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 llmg_1297 8c0b27750e90888e24405b3cc82bb883 318 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 318 22.319 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 Pfam PF00121 Triosephosphate isomerase 6 247 1.9E-87 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 SUPERFAMILY SSF51351 1 250 5.5E-88 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 250 56.396 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 Gene3D G3DSA:3.20.20.70 1 252 2.5E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1424 68997242fe6472109acd592d53f2f5b4 252 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 242 5.6E-53 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 SUPERFAMILY SSF55920 195 402 4.58E-20 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 Gene3D G3DSA:3.90.230.10 191 410 1.3E-14 T 14-10-2018 llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 Pfam PF00557 Metallopeptidase family M24 203 398 3.8E-7 T 14-10-2018 IPR000994 Peptidase M24 llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 Gene3D G3DSA:3.40.350.10 19 129 2.2E-7 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 SUPERFAMILY SSF53092 23 119 6.8E-8 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_1171 15280a32b77a7e98b091f340ee40ffec 461 Pfam PF01321 Creatinase/Prolidase N-terminal domain 32 130 6.7E-6 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 SUPERFAMILY SSF53098 3 138 1.82E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 140 26.656 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 Gene3D G3DSA:3.30.420.140 2 142 6.3E-47 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 137 3.5E-43 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 SMART SM00732 3 105 7.3E-29 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 llmg_0151 f439c503bd00fa9a2616dc2a7a73f27d 143 Pfam PF03652 Holliday junction resolvase 4 137 2.7E-41 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 312 7.2E-99 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PIRSF PIRSF000102 2 323 2.7E-99 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 152 319 3.9E-21 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 SUPERFAMILY SSF56327 150 317 3.89E-47 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 1.2E-34 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PRINTS PR00086 L-lactate dehydrogenase signature 147 165 1.2E-34 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.2E-34 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PRINTS PR00086 L-lactate dehydrogenase signature 177 190 1.2E-34 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 PRINTS PR00086 L-lactate dehydrogenase signature 123 143 1.2E-34 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 149 9.4E-30 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 SUPERFAMILY SSF51735 2 151 3.9E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 Gene3D G3DSA:3.90.110.10 152 322 9.2E-52 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 318 41.002 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_1429 ac8f6075713406076cb6f569e4e8483d 323 Gene3D G3DSA:3.40.50.720 1 151 3.1E-45 T 14-10-2018 llmg_0236 4dbd077f54702f3c8dad15b35d45f36d 199 SUPERFAMILY SSF52374 24 198 5.63E-36 T 14-10-2018 llmg_0236 4dbd077f54702f3c8dad15b35d45f36d 199 Pfam PF01467 Cytidylyltransferase-like 27 172 9.0E-24 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_0236 4dbd077f54702f3c8dad15b35d45f36d 199 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 64 2.4E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_0236 4dbd077f54702f3c8dad15b35d45f36d 199 Gene3D G3DSA:3.40.50.620 23 199 2.3E-42 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0236 4dbd077f54702f3c8dad15b35d45f36d 199 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 23 199 20.889 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 llmg_1413 73aac32770666f732f772ce35cc995aa 205 Pfam PF07314 Protein of unknown function (DUF1461) 9 175 1.9E-40 T 14-10-2018 IPR010178 Integral membrane protein 1906 llmg_1413 73aac32770666f732f772ce35cc995aa 205 TIGRFAM TIGR01906 integ_TIGR01906: integral membrane protein TIGR01906 1 194 1.4E-42 T 14-10-2018 IPR010178 Integral membrane protein 1906 llmg_0741 0baf812685678790746cc347accd784b 531 SUPERFAMILY SSF51011 459 528 7.2E-13 T 14-10-2018 llmg_0741 0baf812685678790746cc347accd784b 531 Gene3D G3DSA:3.20.20.80 5 451 2.5E-195 T 14-10-2018 llmg_0741 0baf812685678790746cc347accd784b 531 SUPERFAMILY SSF51445 3 456 9.97E-146 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0741 0baf812685678790746cc347accd784b 531 SMART SM00642 13 398 5.4E-154 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0741 0baf812685678790746cc347accd784b 531 Pfam PF00128 Alpha amylase, catalytic domain 28 355 5.1E-119 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0741 0baf812685678790746cc347accd784b 531 Gene3D G3DSA:3.90.400.10 105 169 2.5E-195 T 14-10-2018 llmg_0741 0baf812685678790746cc347accd784b 531 Gene3D G3DSA:2.60.40.1180 460 530 5.1E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta llmg_0741 0baf812685678790746cc347accd784b 531 Pfam PF16657 Maltogenic Amylase, C-terminal domain 459 496 8.1E-7 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal llmg_1963 76d6aac755de32cc75c67288166643b7 323 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 321 30.54 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 llmg_1963 76d6aac755de32cc75c67288166643b7 323 Pfam PF03099 Biotin/lipoate A/B protein ligase family 88 216 1.4E-12 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 llmg_1963 76d6aac755de32cc75c67288166643b7 323 SUPERFAMILY SSF55681 74 271 3.81E-42 T 14-10-2018 llmg_1963 76d6aac755de32cc75c67288166643b7 323 SUPERFAMILY SSF50037 276 319 3.39E-5 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal llmg_1963 76d6aac755de32cc75c67288166643b7 323 Gene3D G3DSA:3.30.930.10 70 272 1.1E-44 T 14-10-2018 llmg_1963 76d6aac755de32cc75c67288166643b7 323 Gene3D G3DSA:2.30.30.100 275 321 1.0E-8 T 14-10-2018 llmg_1963 76d6aac755de32cc75c67288166643b7 323 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 83 320 1.6E-45 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1963 76d6aac755de32cc75c67288166643b7 323 Pfam PF08279 HTH domain 7 59 1.4E-15 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 llmg_1963 76d6aac755de32cc75c67288166643b7 323 Pfam PF02237 Biotin protein ligase C terminal domain 276 320 9.5E-11 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1963 76d6aac755de32cc75c67288166643b7 323 Gene3D G3DSA:1.10.10.10 2 61 1.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1963 76d6aac755de32cc75c67288166643b7 323 SUPERFAMILY SSF46785 4 62 1.93E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1290 2a47caa07723dbb7bc45f1b9ea4c2867 259 Gene3D G3DSA:3.20.20.70 1 258 3.3E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1290 2a47caa07723dbb7bc45f1b9ea4c2867 259 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 8.9E-109 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 llmg_1290 2a47caa07723dbb7bc45f1b9ea4c2867 259 Pfam PF00977 Histidine biosynthesis protein 5 235 5.1E-89 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 llmg_1290 2a47caa07723dbb7bc45f1b9ea4c2867 259 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 46.549 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 llmg_1290 2a47caa07723dbb7bc45f1b9ea4c2867 259 SUPERFAMILY SSF51366 1 253 4.87E-82 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PRINTS PR00958 Homoserine kinase signature 162 179 1.0E-38 T 14-10-2018 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PRINTS PR00958 Homoserine kinase signature 242 257 1.0E-38 T 14-10-2018 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PRINTS PR00958 Homoserine kinase signature 90 105 1.0E-38 T 14-10-2018 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PRINTS PR00958 Homoserine kinase signature 124 137 1.0E-38 T 14-10-2018 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PRINTS PR00958 Homoserine kinase signature 8 23 1.0E-38 T 14-10-2018 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 Pfam PF08544 GHMP kinases C terminal 201 261 1.2E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_1331 294959507a28ce95a4395c88f6035e9a 296 Gene3D G3DSA:3.30.230.10 1 158 4.4E-48 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_1331 294959507a28ce95a4395c88f6035e9a 296 SUPERFAMILY SSF54211 1 145 1.97E-29 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1331 294959507a28ce95a4395c88f6035e9a 296 PIRSF PIRSF000676 1 294 2.5E-88 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 Hamap MF_00384 Homoserine kinase [thrB]. 3 292 29.251 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 83 94 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 TIGRFAM TIGR00191 thrB: homoserine kinase 1 293 8.4E-71 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 Gene3D G3DSA:3.30.70.890 159 278 2.4E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_1331 294959507a28ce95a4395c88f6035e9a 296 Pfam PF00288 GHMP kinases N terminal domain 76 137 1.8E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_1331 294959507a28ce95a4395c88f6035e9a 296 SUPERFAMILY SSF55060 160 272 1.66E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 SMART SM00480 18 375 2.1E-153 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 SUPERFAMILY SSF55979 134 251 2.22E-21 T 14-10-2018 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 Gene3D G3DSA:3.10.150.10 11 244 1.3E-104 T 14-10-2018 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 PIRSF PIRSF000804 2 380 4.1E-88 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 SUPERFAMILY SSF55979 253 379 1.7E-24 T 14-10-2018 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 SUPERFAMILY SSF55979 2 128 1.68E-14 T 14-10-2018 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 377 6.0E-24 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 126 1.8E-20 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 379 7.9E-79 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 5.1E-25 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 llmg_0002 6a7a54b3b3ced12e7225422ae19d6186 380 Gene3D G3DSA:3.70.10.10 139 368 1.3E-104 T 14-10-2018 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 298 5.0E-69 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 SUPERFAMILY SSF82114 167 298 7.63E-46 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 Pfam PF06574 FAD synthetase 12 160 2.3E-37 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 SMART SM00904 176 300 3.2E-55 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 SUPERFAMILY SSF52374 17 169 9.12E-22 T 14-10-2018 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 Gene3D G3DSA:3.40.50.620 2 179 9.9E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 Pfam PF01687 Riboflavin kinase 177 297 1.1E-32 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 Gene3D G3DSA:2.40.30.30 181 299 1.0E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 llmg_1430 d3bc8fbe36d73dcbf3f416abf057a1f5 300 PIRSF PIRSF004491 1 300 1.5E-83 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 llmg_1314 64da8d9db453bab783e8dc62fb37988b 535 Gene3D G3DSA:3.50.50.60 83 301 2.8E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1314 64da8d9db453bab783e8dc62fb37988b 535 Gene3D G3DSA:3.50.50.60 457 530 2.2E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1314 64da8d9db453bab783e8dc62fb37988b 535 Gene3D G3DSA:3.30.70.2700 1 78 5.2E-18 T 14-10-2018 llmg_1314 64da8d9db453bab783e8dc62fb37988b 535 SUPERFAMILY SSF51905 98 524 1.79E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1314 64da8d9db453bab783e8dc62fb37988b 535 PIRSF PIRSF038984 1 531 1.4E-245 T 14-10-2018 IPR028348 FAD dependent protein llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 SMART SM01134 73 232 8.6E-55 T 14-10-2018 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 SMART SM00420 6 58 1.1E-13 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 1.8E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 SUPERFAMILY SSF100950 76 232 9.42E-25 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 SUPERFAMILY SSF46785 3 63 3.68E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 Pfam PF00455 DeoR C terminal sensor domain 77 231 2.1E-39 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain llmg_1172 db9f015b2508e7fd5ec5f2c154606154 253 Gene3D G3DSA:1.10.10.10 1 55 4.1E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 546 1.6E-175 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 Pfam PF00733 Asparagine synthase 240 609 7.0E-81 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 SUPERFAMILY SSF52402 217 608 1.75E-63 T 14-10-2018 llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 Gene3D G3DSA:3.60.20.10 2 190 2.0E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 SUPERFAMILY SSF56235 1 222 5.06E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.9E-46 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain llmg_2506 80a44ba758e52cb02f1d0a559c71cf40 625 PIRSF PIRSF001589 1 623 4.0E-160 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:2.40.50.100 676 750 3.6E-28 T 14-10-2018 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 541 5.3E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 219 892 5.1E-292 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:2.40.270.10 977 1043 1.4E-25 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:3.90.1800.10 1053 1106 1.6E-10 T 14-10-2018 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF04560 RNA polymerase Rpb2, domain 7 1067 1141 8.2E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 288 1.8E-19 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF04561 RNA polymerase Rpb2, domain 2 372 414 4.2E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:3.90.1110.10 142 311 2.4E-47 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1143 12.211 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 ProSitePatterns PS01166 RNA polymerases beta chain signature. 918 930 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:3.90.1100.10 602 675 3.0E-20 T 14-10-2018 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF00562 RNA polymerase Rpb2, domain 6 679 1065 2.5E-166 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 SUPERFAMILY SSF64484 14 1150 0.0 T 14-10-2018 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 1.0E-23 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Pfam PF04563 RNA polymerase beta subunit 29 460 1.8E-20 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:3.90.1100.10 398 595 6.0E-73 T 14-10-2018 llmg_1982 989b11e7e9618cef710c4a5e3c9b57b3 1196 Gene3D G3DSA:2.40.50.150 782 926 1.3E-61 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1731 050669d0df5c8ce4b232dcb4ce5f0412 151 Gene3D G3DSA:1.10.10.10 6 74 2.3E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1731 050669d0df5c8ce4b232dcb4ce5f0412 151 SUPERFAMILY SSF46785 6 122 1.34E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1731 050669d0df5c8ce4b232dcb4ce5f0412 151 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 8 134 7.8E-39 T 14-10-2018 IPR014071 Copper transport repressor CopY/TcrY llmg_1731 050669d0df5c8ce4b232dcb4ce5f0412 151 Pfam PF03965 Penicillinase repressor 9 121 9.3E-34 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 llmg_1731 050669d0df5c8ce4b232dcb4ce5f0412 151 PIRSF PIRSF019455 1 133 5.9E-45 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 llmg_2281 2c7000da1ac2037ab7fe6f4893ff1d5c 173 Gene3D G3DSA:3.30.1060.10 1 165 3.3E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_2281 2c7000da1ac2037ab7fe6f4893ff1d5c 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 155 3.5E-56 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_2281 2c7000da1ac2037ab7fe6f4893ff1d5c 173 SUPERFAMILY SSF55068 3 156 1.31E-65 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_2281 2c7000da1ac2037ab7fe6f4893ff1d5c 173 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 2.1E-58 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_2281 2c7000da1ac2037ab7fe6f4893ff1d5c 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 35.28 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_2098 600e243cf64ec99fb77d3dc6ed3c41f5 390 Pfam PF04860 Phage portal protein 72 327 1.2E-29 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein llmg_2098 600e243cf64ec99fb77d3dc6ed3c41f5 390 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 325 2.4E-36 T 14-10-2018 IPR006427 Phage portal protein, HK97 llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 Pfam PF00072 Response regulator receiver domain 5 116 2.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 SUPERFAMILY SSF52172 3 174 5.27E-41 T 14-10-2018 IPR011006 CheY-like superfamily llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 SMART SM00862 149 224 2.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 Gene3D G3DSA:1.10.10.10 131 227 6.8E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 1.5E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 SMART SM00448 3 116 7.5E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1520 666f9b64920b36bdb65c50c4d63fffe4 228 Gene3D G3DSA:3.40.50.2300 2 130 5.9E-36 T 14-10-2018 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.8E-35 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.8E-35 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 73 91 3.8E-35 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.8E-35 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 118 137 3.8E-35 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 Gene3D G3DSA:3.30.1360.80 9 158 6.6E-57 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 PIRSF PIRSF006160 1 158 1.6E-64 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 SUPERFAMILY SSF63411 4 157 1.19E-59 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 149 7.0E-53 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 156 37.173 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_0273 b6108e03ca01d8858d97e2e23721965d 158 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 151 3.0E-81 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 Gene3D G3DSA:3.40.50.720 1 243 2.9E-83 T 14-10-2018 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 188 9.1E-7 T 14-10-2018 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.8E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 5.5E-64 T 14-10-2018 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 241 1.7E-100 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 SUPERFAMILY SSF51735 4 243 1.79E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1784 1791fda0347f33f1c4afb6b2ecc75aa4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.5E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Pfam PF02824 TGS domain 395 454 2.7E-19 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Pfam PF13291 ACT domain 660 737 6.9E-20 T 14-10-2018 IPR002912 ACT domain llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Pfam PF04607 Region found in RelA / SpoT proteins 240 348 9.3E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Gene3D G3DSA:3.30.70.260 660 740 2.6E-15 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Gene3D G3DSA:1.10.3210.10 3 196 4.0E-85 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SUPERFAMILY SSF55021 665 737 9.51E-10 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Pfam PF13328 HD domain 31 180 4.2E-48 T 14-10-2018 IPR003607 HD/PDEase domain llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SMART SM00471 46 158 3.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SUPERFAMILY SSF81271 382 455 1.92E-19 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SUPERFAMILY SSF81301 199 370 6.54E-63 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Gene3D G3DSA:3.10.20.30 388 459 5.2E-30 T 14-10-2018 IPR012675 Beta-grasp domain superfamily llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 Gene3D G3DSA:3.30.460.10 197 329 3.5E-53 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 737 7.6E-239 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SUPERFAMILY SSF109604 13 196 8.79E-73 T 14-10-2018 llmg_0113 2cbfc9b225407b2cfb484c79296c5b97 740 SMART SM00954 240 349 2.3E-64 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 Gene3D G3DSA:1.10.10.10 1 77 3.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 SUPERFAMILY SSF46689 3 73 1.09E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 SUPERFAMILY SSF53697 92 277 2.52E-38 T 14-10-2018 llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 Gene3D G3DSA:3.40.50.10490 94 281 4.7E-42 T 14-10-2018 llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 Pfam PF01380 SIS domain 127 256 3.1E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_2470 a5c99e39431b3bb2b722c8375a016054 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 77 3.8E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_1604 59ab56ba99006c1acfa7ee19111a9311 395 Gene3D G3DSA:3.40.50.11820 29 386 1.5E-119 T 14-10-2018 llmg_1604 59ab56ba99006c1acfa7ee19111a9311 395 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 28 393 1.7E-119 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 llmg_1604 59ab56ba99006c1acfa7ee19111a9311 395 SUPERFAMILY SSF53756 162 392 1.15E-17 T 14-10-2018 llmg_1604 59ab56ba99006c1acfa7ee19111a9311 395 Gene3D G3DSA:3.40.50.12580 203 379 1.5E-119 T 14-10-2018 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 Gene3D G3DSA:1.20.1050.90 119 298 5.0E-109 T 14-10-2018 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 353 6.7E-137 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 353 1.8E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 98.474 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 SUPERFAMILY SSF52540 1 356 3.12E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 llmg_2229 367aa087779c21c2639c080ca6b1f35f 359 Gene3D G3DSA:3.40.50.300 6 332 5.0E-109 T 14-10-2018 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 TIGRFAM TIGR01886 dipeptidase: dipeptidase PepV 3 472 5.0E-259 T 14-10-2018 IPR011291 Peptidase M20A, peptidase V llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 Pfam PF01546 Peptidase family M20/M25/M40 90 468 3.9E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 14 467 3.9E-192 T 14-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 Gene3D G3DSA:3.40.630.10 16 470 1.7E-156 T 14-10-2018 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 87 96 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 Gene3D G3DSA:3.30.70.360 210 298 1.7E-156 T 14-10-2018 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 Gene3D G3DSA:3.30.70.360 193 386 1.7E-156 T 14-10-2018 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 SUPERFAMILY SSF55031 193 386 2.91E-48 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 SUPERFAMILY SSF53187 4 471 2.1E-63 T 14-10-2018 llmg_1706 779fb273e917c569c88c4c9c451f68bc 472 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 121 160 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 TIGRFAM TIGR00761 argB: acetylglutamate kinase 25 257 8.2E-68 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 SUPERFAMILY SSF53633 3 281 5.24E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 Pfam PF00696 Amino acid kinase family 25 249 5.9E-41 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 PRINTS PR00474 Glutamate 5-kinase family signature 233 253 1.6E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 1.6E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 PRINTS PR00474 Glutamate 5-kinase family signature 180 207 1.6E-11 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 Hamap MF_00082 Acetylglutamate kinase [argB]. 23 276 45.655 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 PIRSF PIRSF000728 9 283 1.6E-101 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1755 f6fe0fcb993a585d450ee71018e15865 283 Gene3D G3DSA:3.40.1160.10 2 283 7.6E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2529 df8d6bc6961b51c2599c98769265cbaa 93 SUPERFAMILY SSF46955 41 91 2.75E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 Gene3D G3DSA:3.40.1160.10 1 314 2.7E-110 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 2.6E-58 T 14-10-2018 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 TIGRFAM TIGR00746 arcC: carbamate kinase 4 313 2.5E-112 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 PIRSF PIRSF000723 1 314 6.6E-109 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 SUPERFAMILY SSF53633 3 312 3.53E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2310 2479b742b2588d2dcb1f0171821703d5 314 Pfam PF00696 Amino acid kinase family 4 295 5.2E-28 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_0998 1106db6691758935c54293ad67b4e634 230 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 206 1.4E-23 T 14-10-2018 llmg_0998 1106db6691758935c54293ad67b4e634 230 Gene3D G3DSA:3.40.50.1000 3 205 2.4E-21 T 14-10-2018 IPR023214 HAD superfamily llmg_0998 1106db6691758935c54293ad67b4e634 230 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 204 3.2E-16 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0998 1106db6691758935c54293ad67b4e634 230 SUPERFAMILY SSF56784 2 229 1.26E-26 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0998 1106db6691758935c54293ad67b4e634 230 Gene3D G3DSA:3.30.1240.10 78 165 2.4E-21 T 14-10-2018 llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 SUPERFAMILY SSF51735 15 315 4.33E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 40 201 3.1E-12 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 239 490 4.8E-27 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 Gene3D G3DSA:3.40.50.720 16 314 5.0E-79 T 14-10-2018 llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 Gene3D G3DSA:1.10.1040.10 319 536 1.6E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_0858 6fa042f170dbc2bbf2ea58941a81c0b7 544 SUPERFAMILY SSF48179 323 526 1.09E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_0416 a344291f175ad0aec7143c0bd7cc6199 286 Gene3D G3DSA:3.40.50.300 3 162 3.6E-45 T 14-10-2018 llmg_0416 a344291f175ad0aec7143c0bd7cc6199 286 SUPERFAMILY SSF52540 6 190 1.17E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0416 a344291f175ad0aec7143c0bd7cc6199 286 Pfam PF13177 DNA polymerase III, delta subunit 7 162 2.4E-54 T 14-10-2018 llmg_0416 a344291f175ad0aec7143c0bd7cc6199 286 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 191 2.6E-54 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 18 371 5.1E-135 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 Gene3D G3DSA:2.40.30.10 294 384 3.3E-31 T 14-10-2018 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 17 372 40.934 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 SUPERFAMILY SSF52402 16 254 2.87E-59 T 14-10-2018 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 Pfam PF03054 tRNA methyl transferase 18 371 1.4E-145 T 14-10-2018 llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 Gene3D G3DSA:3.40.50.620 10 222 4.2E-101 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1725 c06b1c901246e94d9e77196fe007a51f 384 Gene3D G3DSA:2.30.30.280 224 293 5.0E-26 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 llmg_2185 a50670b8a5bef64fa9f0733010b2a22c 289 Pfam PF01263 Aldose 1-epimerase 3 253 9.0E-33 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 llmg_2185 a50670b8a5bef64fa9f0733010b2a22c 289 Gene3D G3DSA:2.70.98.10 2 289 9.3E-105 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 llmg_2185 a50670b8a5bef64fa9f0733010b2a22c 289 SUPERFAMILY SSF74650 3 288 1.44E-58 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_1451 e625f3c4e4369a08080b369240278889 836 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 810 0.0 T 14-10-2018 llmg_1451 e625f3c4e4369a08080b369240278889 836 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 10 812 24.295 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 SMART SM00434 16 469 5.2E-277 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 1.7E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 616 659 3.1E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 663 708 1.1E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 559 608 2.9E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 555 1.3E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 761 1.2E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1451 e625f3c4e4369a08080b369240278889 836 Gene3D G3DSA:2.120.10.90 501 810 1.9E-122 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal llmg_1451 e625f3c4e4369a08080b369240278889 836 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 476 1.6E-157 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1451 e625f3c4e4369a08080b369240278889 836 SUPERFAMILY SSF56719 36 491 1.83E-175 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1451 e625f3c4e4369a08080b369240278889 836 Gene3D G3DSA:1.10.268.10 374 462 5.0E-210 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1451 e625f3c4e4369a08080b369240278889 836 Gene3D G3DSA:3.30.1360.40 241 337 5.0E-210 T 14-10-2018 llmg_1451 e625f3c4e4369a08080b369240278889 836 SUPERFAMILY SSF101904 504 822 9.55E-109 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal llmg_1451 e625f3c4e4369a08080b369240278889 836 Gene3D G3DSA:3.90.199.10 37 490 5.0E-210 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 SUPERFAMILY SSF50346 100 169 1.0E-16 T 14-10-2018 IPR011033 PRC-barrel-like superfamily llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 SUPERFAMILY SSF50447 4 90 2.79E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 Pfam PF01782 RimM N-terminal domain 7 90 4.1E-21 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 Gene3D G3DSA:2.30.30.240 95 171 1.8E-17 T 14-10-2018 llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 Pfam PF05239 PRC-barrel domain 98 169 1.8E-10 T 14-10-2018 IPR027275 PRC-barrel domain llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 Gene3D G3DSA:2.40.30.60 5 92 3.9E-17 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 169 2.6E-44 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 llmg_0936 42421db1c58da4bd9c7cf4269d794a95 171 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 169 22.253 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.3E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.3E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.3E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 SMART SM00936 308 415 4.6E-10 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 SUPERFAMILY SSF56601 8 307 3.76E-66 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 308 415 1.1E-15 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 27 284 4.2E-74 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 SUPERFAMILY SSF69189 300 425 1.96E-9 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 Gene3D G3DSA:2.60.410.10 310 415 4.8E-13 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 llmg_2560 954d0c371a291e9bbc46001f98f4c1b8 434 Gene3D G3DSA:3.40.710.10 25 307 1.4E-81 T 14-10-2018 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Gene3D G3DSA:3.30.230.70 233 553 1.7E-109 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 695 7.5E-297 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF54791 560 644 3.5E-22 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF00575 S1 RNA binding domain 623 693 7.3E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF54211 6 141 1.01E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF00013 KH domain 561 618 4.3E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF50249 624 704 8.95E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF01138 3' exoribonuclease family, domain 1 13 141 6.3E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF01138 3' exoribonuclease family, domain 1 325 460 2.7E-12 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 PIRSF PIRSF005499 1 728 2.7E-282 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 239 322 6.2E-11 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF03725 3' exoribonuclease family, domain 2 463 532 3.4E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Pfam PF03725 3' exoribonuclease family, domain 2 144 207 3.2E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 697 28.904 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Gene3D G3DSA:3.30.1370.10 554 625 4.3E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF54211 297 491 5.57E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Gene3D G3DSA:3.30.230.70 1 227 7.6E-79 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF55666 454 552 1.13E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF55666 135 228 7.46E-27 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 Gene3D G3DSA:2.40.50.140 626 696 7.2E-25 T 14-10-2018 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SMART SM00322 556 621 1.4E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SMART SM00316 624 694 4.1E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_2044 30baef244de813c61563d8e38ed2fdf4 766 SUPERFAMILY SSF46915 235 322 2.33E-14 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 llmg_1333 3e1700094c0b25570c00b95d51f618e9 212 SUPERFAMILY SSF52540 1 207 8.67E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1333 3e1700094c0b25570c00b95d51f618e9 212 Gene3D G3DSA:3.40.50.300 1 209 4.9E-57 T 14-10-2018 llmg_1333 3e1700094c0b25570c00b95d51f618e9 212 Pfam PF01712 Deoxynucleoside kinase 2 204 1.1E-57 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain llmg_1333 3e1700094c0b25570c00b95d51f618e9 212 PIRSF PIRSF000705 1 211 4.9E-56 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 llmg_1806 e681c72369e3039cd736c50014099e23 171 Pfam PF13599 Pentapeptide repeats (9 copies) 27 101 2.8E-16 T 14-10-2018 IPR001646 Pentapeptide repeat llmg_1806 e681c72369e3039cd736c50014099e23 171 SUPERFAMILY SSF141571 6 170 6.15E-31 T 14-10-2018 llmg_1806 e681c72369e3039cd736c50014099e23 171 Gene3D G3DSA:2.160.20.100 2 171 1.8E-34 T 14-10-2018 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 SUPERFAMILY SSF50249 558 660 1.0E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Gene3D G3DSA:1.10.730.10 349 524 6.7E-51 T 14-10-2018 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 547 661 2.4E-36 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Pfam PF01588 Putative tRNA binding domain 565 659 2.3E-23 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 518 50.528 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 SUPERFAMILY SSF47323 361 572 2.99E-44 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 359 370 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 267 282 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 1.1E-32 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 494 6.4E-167 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Pfam PF09334 tRNA synthetases class I (M) 7 371 4.4E-111 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Gene3D G3DSA:2.40.50.140 552 662 7.4E-30 T 14-10-2018 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Pfam PF08264 Anticodon-binding domain of tRNA 398 489 8.0E-8 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 SUPERFAMILY SSF52374 4 362 1.13E-107 T 14-10-2018 llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Gene3D G3DSA:3.40.50.620 7 344 1.7E-141 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1764 7825bd4763bff81bb59ceb4cff611e6e 662 Gene3D G3DSA:2.170.220.10 118 237 1.7E-141 T 14-10-2018 llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 Gene3D G3DSA:2.60.40.1180 534 587 2.3E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 SUPERFAMILY SSF51445 176 499 3.97E-55 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 Gene3D G3DSA:3.20.20.80 172 532 3.5E-86 T 14-10-2018 llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 SUPERFAMILY SSF51011 503 586 2.09E-17 T 14-10-2018 llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 Gene3D G3DSA:2.60.40.1180 588 704 6.6E-6 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta llmg_1836 1a503cc632e6eb5c17abf8b03e6cbc8a 739 Pfam PF01055 Glycosyl hydrolases family 31 169 591 2.5E-97 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SMART SM00079 261 482 5.0E-5 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SUPERFAMILY SSF53850 259 482 4.0E-60 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 248 9.3E-55 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Gene3D G3DSA:3.40.190.10 265 479 6.0E-85 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 504 608 8.2E-26 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Gene3D G3DSA:3.40.190.10 32 247 7.4E-82 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 263 480 6.5E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SMART SM00062 261 483 3.0E-52 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SMART SM00062 29 249 2.6E-50 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Gene3D G3DSA:1.10.3720.10 496 714 5.1E-56 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 528 714 3.1E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 52 65 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Gene3D G3DSA:3.40.190.10 346 441 6.0E-85 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 Gene3D G3DSA:3.40.190.10 114 209 7.4E-82 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SUPERFAMILY SSF53850 1 248 1.58E-60 T 14-10-2018 llmg_1942 aee105dfd1a5a9dbf8a11a3cff60ad7c 714 SUPERFAMILY SSF161098 504 705 2.88E-46 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1989 6abda14082901d268a479fefa10ed2cc 483 SUPERFAMILY SSF53244 330 471 4.06E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 36 472 1.1E-81 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Gene3D G3DSA:3.40.1390.10 15 103 4.5E-7 T 14-10-2018 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Gene3D G3DSA:3.90.190.20 332 483 2.4E-29 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 483 27.484 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Pfam PF08245 Mur ligase middle domain 115 310 7.2E-40 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 SUPERFAMILY SSF63418 16 105 2.35E-10 T 14-10-2018 IPR035911 MurE/MurF, N-terminal llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Gene3D G3DSA:3.40.1190.10 105 331 3.4E-55 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 SUPERFAMILY SSF53623 76 342 2.22E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_1989 6abda14082901d268a479fefa10ed2cc 483 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 414 4.5E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 llmg_1057 a9f5c8e44da884203102204a75aef141 143 Pfam PF06146 Phosphate-starvation-inducible E 59 124 3.2E-6 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like llmg_1057 a9f5c8e44da884203102204a75aef141 143 PIRSF PIRSF029598 1 142 2.7E-41 T 14-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 llmg_2100 0a183c79b0c4112b056a16bf763583c6 532 Pfam PF03354 Phage Terminase 2 478 8.0E-51 T 14-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type llmg_2100 0a183c79b0c4112b056a16bf763583c6 532 Gene3D G3DSA:3.40.50.300 4 185 8.8E-12 T 14-10-2018 llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 Gene3D G3DSA:3.90.1150.10 2 367 3.4E-118 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 PIRSF PIRSF005572 1 380 9.0E-112 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 Gene3D G3DSA:1.10.260.50 13 278 3.4E-118 T 14-10-2018 llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 SUPERFAMILY SSF53383 1 375 1.03E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 Gene3D G3DSA:3.40.640.10 59 235 3.4E-118 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0505 2545bf03c72f116d6f3e4a0f3b88db89 381 Pfam PF00266 Aminotransferase class-V 2 365 8.3E-63 T 14-10-2018 IPR000192 Aminotransferase class V domain llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 PIRSF PIRSF000414 1 518 5.3E-204 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Gene3D G3DSA:3.40.140.20 205 361 1.2E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Gene3D G3DSA:3.40.50.1380 1 196 8.9E-84 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 SUPERFAMILY SSF52335 2 192 1.42E-64 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 SMART SM00851 14 128 3.3E-46 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 SUPERFAMILY SSF53927 209 518 5.01E-120 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 518 42.7 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 518 2.3E-203 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Gene3D G3DSA:3.40.140.20 380 518 4.0E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 SMART SM00798 133 449 1.6E-185 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 447 1.7E-114 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0994 4aa2651fbdeb554969f411f17d9b7042 518 Pfam PF02142 MGS-like domain 14 127 1.1E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 Gene3D G3DSA:3.40.50.720 1 256 2.0E-81 T 14-10-2018 llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 256 5.2E-123 T 14-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.7E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 253 4.5E-55 T 14-10-2018 llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 SUPERFAMILY SSF51735 2 253 6.41E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0339 ec2f701625c4253ece4070a8a0c53644 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.9E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1320 3cde3ae973c182f8a925c6c390010231 461 Pfam PF04616 Glycosyl hydrolases family 43 7 223 9.2E-49 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 llmg_1320 3cde3ae973c182f8a925c6c390010231 461 Gene3D G3DSA:2.115.10.20 1 238 6.9E-54 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily llmg_1320 3cde3ae973c182f8a925c6c390010231 461 Gene3D G3DSA:2.60.120.200 251 459 1.8E-33 T 14-10-2018 llmg_1320 3cde3ae973c182f8a925c6c390010231 461 SUPERFAMILY SSF75005 10 227 3.28E-50 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily llmg_1320 3cde3ae973c182f8a925c6c390010231 461 SUPERFAMILY SSF49899 249 458 3.17E-45 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily llmg_2161 20c7ef384dbcb185e86270dcb7a92156 397 Pfam PF02353 Mycolic acid cyclopropane synthetase 107 374 1.0E-100 T 14-10-2018 llmg_2161 20c7ef384dbcb185e86270dcb7a92156 397 Gene3D G3DSA:3.40.50.150 116 383 2.7E-97 T 14-10-2018 llmg_2161 20c7ef384dbcb185e86270dcb7a92156 397 PIRSF PIRSF003085 5 395 2.9E-124 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 llmg_2161 20c7ef384dbcb185e86270dcb7a92156 397 SUPERFAMILY SSF53335 118 380 2.28E-80 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0721 042a7624b6b3397cdc7a9c460163d997 279 Pfam PF00665 Integrase core domain 118 233 6.3E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0721 042a7624b6b3397cdc7a9c460163d997 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0721 042a7624b6b3397cdc7a9c460163d997 279 SUPERFAMILY SSF53098 114 277 1.77E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0721 042a7624b6b3397cdc7a9c460163d997 279 Gene3D G3DSA:3.30.420.10 112 271 2.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Pfam PF01183 Glycosyl hydrolases family 25 33 216 8.7E-31 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Gene3D G3DSA:3.10.350.10 331 374 9.3E-15 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SUPERFAMILY SSF51445 29 229 2.53E-36 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SMART SM00641 115 236 4.0E-46 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SUPERFAMILY SSF54106 385 427 4.84E-10 T 14-10-2018 llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SUPERFAMILY SSF54106 332 374 5.1E-10 T 14-10-2018 llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Gene3D G3DSA:3.10.350.10 381 428 2.3E-16 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Gene3D G3DSA:3.20.20.80 27 221 1.0E-40 T 14-10-2018 llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SMART SM00257 332 376 3.9E-11 T 14-10-2018 IPR018392 LysM domain llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 SMART SM00257 386 428 2.5E-11 T 14-10-2018 IPR018392 LysM domain llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Pfam PF01476 LysM domain 333 374 2.1E-13 T 14-10-2018 IPR018392 LysM domain llmg_0851 df6f24246ad1f19008f6c7ea0a91863e 429 Pfam PF01476 LysM domain 387 427 2.8E-13 T 14-10-2018 IPR018392 LysM domain llmg_0177 fcf8544c45099b1d08017cac10eb8126 499 Pfam PF01425 Amidase 23 480 1.4E-68 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0177 fcf8544c45099b1d08017cac10eb8126 499 SUPERFAMILY SSF75304 5 489 3.27E-98 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0177 fcf8544c45099b1d08017cac10eb8126 499 ProSitePatterns PS00571 Amidases signature. 144 175 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 llmg_0177 fcf8544c45099b1d08017cac10eb8126 499 Gene3D G3DSA:3.90.1300.10 2 497 8.1E-120 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 197 4.0E-30 T 14-10-2018 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 191 5.7E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 Gene3D G3DSA:1.10.150.240 29 89 2.7E-27 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 SUPERFAMILY SSF56784 9 224 5.97E-46 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1817 b156808fc981562dfffc6d3077a850a0 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 15 26 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 111 124 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 160 180 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 142 158 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1817 b156808fc981562dfffc6d3077a850a0 234 Gene3D G3DSA:3.40.50.1000 90 223 7.9E-34 T 14-10-2018 IPR023214 HAD superfamily llmg_1817 b156808fc981562dfffc6d3077a850a0 234 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 195 4.7E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Gene3D G3DSA:1.10.290.10 271 405 2.6E-159 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 SMART SM00493 24 124 2.6E-27 T 14-10-2018 IPR006171 TOPRIM domain llmg_1272 ea0479ee821424f751395ec1582da5c0 708 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 26 625 2.3E-242 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Pfam PF01131 DNA topoisomerase 149 562 8.5E-132 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Gene3D G3DSA:2.70.20.10 205 471 2.6E-159 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 487 501 4.9E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 4.9E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 4.9E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 4.9E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 183 201 4.9E-36 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Hamap MF_00952 DNA topoisomerase 1 [topA]. 24 656 55.029 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 671 706 0.26 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 630 669 1.2E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 592 626 1.6E-14 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 SUPERFAMILY SSF57783 588 627 3.91E-13 T 14-10-2018 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Gene3D G3DSA:3.30.65.10 573 632 3.6E-13 T 14-10-2018 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 SUPERFAMILY SSF56712 24 603 4.84E-193 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Pfam PF01751 Toprim domain 26 134 1.7E-29 T 14-10-2018 IPR006171 TOPRIM domain llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Gene3D G3DSA:3.40.50.140 19 155 4.0E-54 T 14-10-2018 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 Gene3D G3DSA:1.10.460.10 156 564 2.6E-159 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 SMART SM00437 263 524 9.8E-110 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 SMART SM00436 125 213 1.0E-48 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 llmg_1272 ea0479ee821424f751395ec1582da5c0 708 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 300 323 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 Gene3D G3DSA:3.30.310.10 1 80 1.6E-15 T 14-10-2018 IPR012295 TBP domain superfamily llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 290 36.166 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 Pfam PF01351 Ribonuclease HII 79 283 8.9E-51 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 PIRSF PIRSF037748 1 291 1.3E-107 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 Gene3D G3DSA:3.30.420.10 81 292 1.0E-68 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 4 282 4.0E-58 T 14-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 Pfam PF11858 Domain of unknown function (DUF3378) 2 76 4.5E-25 T 14-10-2018 IPR024568 Ribonuclease HIII, N-terminal llmg_2549 b75038ee2d646cb4a97b265e2af8e2c5 292 SUPERFAMILY SSF53098 78 288 6.22E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 305 311 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 493 616 1.8E-23 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 70 326 1.8E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 SUPERFAMILY SSF56784 297 590 4.02E-37 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:1.20.1110.10 577 675 2.2E-40 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 551 3.3E-19 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 303 317 3.3E-19 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 146 160 3.3E-19 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 456 466 3.3E-19 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 3.3E-19 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:1.20.1110.10 41 299 2.7E-61 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 546 3.0E-24 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 SUPERFAMILY SSF81665 3 773 9.42E-57 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:2.70.150.10 4 199 2.7E-61 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 SUPERFAMILY SSF81653 101 193 2.48E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 404 422 1.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 563 588 1.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 504 520 1.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 532 548 1.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Pfam PF00122 E1-E2 ATPase 98 282 3.6E-44 T 14-10-2018 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:3.40.1110.10 313 354 2.7E-61 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:3.40.1110.10 425 441 2.2E-40 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:3.40.50.1000 442 576 2.2E-40 T 14-10-2018 IPR023214 HAD superfamily llmg_1318 54867ec6316bbcb0d051e01d524cb3ac 841 Gene3D G3DSA:3.40.50.1000 300 312 2.7E-61 T 14-10-2018 IPR023214 HAD superfamily llmg_2092 096b2b7cfbd9be679a5a45ed28ae1b14 131 Pfam PF05657 Protein of unknown function (DUF806) 4 124 3.1E-46 T 14-10-2018 IPR008524 Protein of unknown function DUF806 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 PIRSF PIRSF036361 1 446 2.6E-169 T 14-10-2018 IPR011240 Phosphoesterase-related protein YunD llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 SUPERFAMILY SSF55816 283 445 1.96E-12 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 Pfam PF00149 Calcineurin-like phosphoesterase 4 192 6.1E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 PRINTS PR01607 Apyrase family signature 315 338 1.9E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 PRINTS PR01607 Apyrase family signature 2 20 1.9E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 PRINTS PR01607 Apyrase family signature 175 198 1.9E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 PRINTS PR01607 Apyrase family signature 203 223 1.9E-12 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 Gene3D G3DSA:3.60.21.10 1 252 3.5E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_0192 0fa1c53e5538e4da93f8ea4c186f87d5 446 SUPERFAMILY SSF56300 3 243 2.53E-53 T 14-10-2018 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 7.8E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 7.8E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 7.8E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 7.8E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SUPERFAMILY SSF55874 283 459 7.73E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SUPERFAMILY SSF55785 101 219 4.89E-11 T 14-10-2018 IPR035965 PAS domain superfamily llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SUPERFAMILY SSF47384 212 295 4.71E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 228 293 5.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Gene3D G3DSA:3.30.450.20 121 219 4.0E-21 T 14-10-2018 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 459 2.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Pfam PF00989 PAS fold 114 217 1.1E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Gene3D G3DSA:3.30.565.10 300 472 6.0E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SMART SM00388 227 294 9.2E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 111 227 1.1E-5 T 14-10-2018 IPR000014 PAS domain llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 Gene3D G3DSA:1.10.287.130 220 294 4.4E-27 T 14-10-2018 llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SMART SM00091 113 179 3.4E-8 T 14-10-2018 IPR000014 PAS domain llmg_0413 d3f98a0185e66aae5c35f1c78e286f71 475 SMART SM00387 347 461 6.9E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Pfam PF00623 RNA polymerase Rpb1, domain 2 334 475 3.2E-38 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Pfam PF04983 RNA polymerase Rpb1, domain 3 479 663 1.8E-33 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.10.132.30 660 794 5.8E-55 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.10.150.390 1132 1191 2.2E-28 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.10.40.90 364 406 1.2E-19 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 SUPERFAMILY SSF64484 5 1190 0.0 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Pfam PF05000 RNA polymerase Rpb1, domain 4 693 756 7.8E-13 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1183 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 332 9.7E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 SMART SM00663 225 504 8.4E-181 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1131 2.6E-60 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:2.40.50.100 967 1031 1.1E-60 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.10.274.100 480 659 4.2E-42 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1203 18.007 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.10.1790.20 951 1130 1.1E-60 T 14-10-2018 llmg_1981 c0d444368d553cf2bf5ad150508a42ab 1207 Gene3D G3DSA:1.20.120.1280 2 112 2.1E-5 T 14-10-2018 llmg_0384 1ec565e87e36e9c496c3780f0ef00277 293 Pfam PF00849 RNA pseudouridylate synthase 85 239 8.9E-25 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0384 1ec565e87e36e9c496c3780f0ef00277 293 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 129 143 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0384 1ec565e87e36e9c496c3780f0ef00277 293 Gene3D G3DSA:3.30.2350.10 78 293 1.6E-58 T 14-10-2018 llmg_0384 1ec565e87e36e9c496c3780f0ef00277 293 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 34 293 1.7E-63 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_0384 1ec565e87e36e9c496c3780f0ef00277 293 SUPERFAMILY SSF55120 77 292 1.6E-59 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 SUPERFAMILY SSF63380 92 194 7.06E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 Gene3D G3DSA:2.40.30.20 1 88 2.7E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 2.3E-77 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 SUPERFAMILY SSF63380 1 87 1.7E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 Gene3D G3DSA:2.40.30.20 101 200 2.9E-37 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 Pfam PF00677 Lumazine binding domain 3 86 1.9E-22 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 Pfam PF00677 Lumazine binding domain 99 183 6.1E-27 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1531 cfe7c1d0d1b11e01d63b0c44757c9f07 215 PIRSF PIRSF000498 1 208 2.8E-81 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_0441 1308648dab380917c28e77556c466f56 478 Gene3D G3DSA:3.20.20.80 1 478 3.2E-167 T 14-10-2018 llmg_0441 1308648dab380917c28e77556c466f56 478 Pfam PF00232 Glycosyl hydrolase family 1 2 475 2.7E-132 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 SUPERFAMILY SSF51445 2 476 9.11E-166 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0441 1308648dab380917c28e77556c466f56 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.8E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.8E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 2.8E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 2.8E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 2.8E-17 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0441 1308648dab380917c28e77556c466f56 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site llmg_0441 1308648dab380917c28e77556c466f56 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site llmg_2451 44a99f160ee0b1d1c813fb196ffaa063 267 Pfam PF01381 Helix-turn-helix 10 59 3.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2451 44a99f160ee0b1d1c813fb196ffaa063 267 Gene3D G3DSA:1.25.40.10 1 267 1.9E-48 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_2451 44a99f160ee0b1d1c813fb196ffaa063 267 SUPERFAMILY SSF48452 113 239 9.34E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_2451 44a99f160ee0b1d1c813fb196ffaa063 267 SMART SM00530 9 63 2.0E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2451 44a99f160ee0b1d1c813fb196ffaa063 267 SUPERFAMILY SSF47413 6 59 6.48E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0393 627574294f52e01f61b42f5abbafd209 273 Gene3D G3DSA:3.40.190.290 82 267 5.9E-11 T 14-10-2018 llmg_0393 627574294f52e01f61b42f5abbafd209 273 SUPERFAMILY SSF53850 90 238 6.15E-18 T 14-10-2018 llmg_0393 627574294f52e01f61b42f5abbafd209 273 SUPERFAMILY SSF46785 4 83 5.65E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0393 627574294f52e01f61b42f5abbafd209 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 6.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0393 627574294f52e01f61b42f5abbafd209 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 5.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0393 627574294f52e01f61b42f5abbafd209 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 5.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0393 627574294f52e01f61b42f5abbafd209 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 5.7E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0393 627574294f52e01f61b42f5abbafd209 273 Pfam PF03466 LysR substrate binding domain 89 236 1.9E-16 T 14-10-2018 IPR005119 LysR, substrate-binding llmg_0393 627574294f52e01f61b42f5abbafd209 273 Gene3D G3DSA:1.10.10.10 2 81 6.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1807 cb21396aa174e61317e5601c15a11936 240 SUPERFAMILY SSF55469 5 232 9.03E-55 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1807 cb21396aa174e61317e5601c15a11936 240 PIRSF PIRSF005426 3 240 4.9E-75 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 llmg_1807 cb21396aa174e61317e5601c15a11936 240 Pfam PF00881 Nitroreductase family 14 165 4.1E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_1807 cb21396aa174e61317e5601c15a11936 240 Gene3D G3DSA:3.40.109.10 4 240 5.9E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 SMART SM00354 5 75 1.0E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 Pfam PF13377 Periplasmic binding protein-like domain 174 331 3.2E-25 T 14-10-2018 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 1.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 1.1E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 SUPERFAMILY SSF53822 65 332 1.41E-74 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 TIGRFAM TIGR01481 ccpA: catabolite control protein A 5 332 7.2E-140 T 14-10-2018 IPR006377 Catabolite control protein A GO:0006355 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 8.5E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 SUPERFAMILY SSF47413 5 63 4.61E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 Gene3D G3DSA:3.40.50.2300 164 291 5.1E-89 T 14-10-2018 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 Gene3D G3DSA:1.10.260.40 5 63 3.1E-26 T 14-10-2018 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 Gene3D G3DSA:3.40.50.2300 64 307 5.1E-89 T 14-10-2018 llmg_0775 538e616bcf5f798efdd3d10231cd4361 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 239 1.5E-39 T 14-10-2018 llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 Gene3D G3DSA:3.30.1240.10 83 188 2.7E-33 T 14-10-2018 llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 240 1.2E-42 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 Gene3D G3DSA:3.40.50.1000 4 229 2.7E-33 T 14-10-2018 IPR023214 HAD superfamily llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 223 1.6E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_2426 a2c57bc82274b28c0cf73cdfcd9a0a6b 251 SUPERFAMILY SSF56784 1 228 1.69E-33 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 Gene3D G3DSA:3.90.79.10 2 165 1.2E-33 T 14-10-2018 llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 Pfam PF00293 NUDIX domain 20 139 1.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 PRINTS PR00502 NUDIX hydrolase family signature 56 71 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 PRINTS PR00502 NUDIX hydrolase family signature 42 56 4.7E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_0232 d797475ce85bbdccf199be04e2f4975d 167 SUPERFAMILY SSF55811 1 145 1.1E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_0948 e753e8035d5171a379a3862d93989356 623 Pfam PF00005 ABC transporter 20 182 2.6E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0948 e753e8035d5171a379a3862d93989356 623 SMART SM00382 28 227 4.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0948 e753e8035d5171a379a3862d93989356 623 SMART SM00382 339 510 4.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0948 e753e8035d5171a379a3862d93989356 623 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0948 e753e8035d5171a379a3862d93989356 623 Pfam PF16326 ABC transporter C-terminal domain 554 620 3.9E-16 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 llmg_0948 e753e8035d5171a379a3862d93989356 623 Pfam PF00005 ABC transporter 331 465 2.6E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0948 e753e8035d5171a379a3862d93989356 623 SUPERFAMILY SSF52540 6 237 3.23E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0948 e753e8035d5171a379a3862d93989356 623 Gene3D G3DSA:1.10.287.380 544 623 1.6E-8 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 llmg_0948 e753e8035d5171a379a3862d93989356 623 Gene3D G3DSA:3.40.50.300 4 276 5.2E-62 T 14-10-2018 llmg_0948 e753e8035d5171a379a3862d93989356 623 Pfam PF12848 ABC transporter 221 298 6.1E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain llmg_0948 e753e8035d5171a379a3862d93989356 623 SUPERFAMILY SSF52540 307 519 3.82E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0948 e753e8035d5171a379a3862d93989356 623 Gene3D G3DSA:3.40.50.300 277 542 1.3E-54 T 14-10-2018 llmg_2332 e0a565ae825111b9176493127c1ab951 483 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2332 e0a565ae825111b9176493127c1ab951 483 Gene3D G3DSA:1.10.10.350 387 483 1.6E-28 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 llmg_2332 e0a565ae825111b9176493127c1ab951 483 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 326 3.4E-110 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 Gene3D G3DSA:3.40.50.620 1 335 1.7E-129 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2332 e0a565ae825111b9176493127c1ab951 483 SUPERFAMILY SSF48163 320 481 9.42E-40 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 llmg_2332 e0a565ae825111b9176493127c1ab951 483 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 478 2.9E-165 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 llmg_2332 e0a565ae825111b9176493127c1ab951 483 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 481 31.549 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 llmg_2332 e0a565ae825111b9176493127c1ab951 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 196 206 3.2E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.2E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.2E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 212 220 3.2E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.2E-28 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 llmg_2332 e0a565ae825111b9176493127c1ab951 483 SUPERFAMILY SSF52374 4 319 6.17E-103 T 14-10-2018 llmg_2075 342c976c50db9a824a4e4e9c9583d806 194 SUPERFAMILY SSF55811 12 185 1.62E-42 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_2075 342c976c50db9a824a4e4e9c9583d806 194 PRINTS PR00502 NUDIX hydrolase family signature 76 90 3.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_2075 342c976c50db9a824a4e4e9c9583d806 194 PRINTS PR00502 NUDIX hydrolase family signature 92 107 3.4E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_2075 342c976c50db9a824a4e4e9c9583d806 194 Gene3D G3DSA:3.90.79.10 8 193 4.1E-46 T 14-10-2018 llmg_2075 342c976c50db9a824a4e4e9c9583d806 194 Pfam PF00293 NUDIX domain 52 163 4.4E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_2269 c6058f532c4ffeb1818bc349369049c2 208 Pfam PF03932 CutC family 3 205 1.6E-85 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 llmg_2269 c6058f532c4ffeb1818bc349369049c2 208 Gene3D G3DSA:3.20.20.380 1 208 9.2E-70 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 llmg_2269 c6058f532c4ffeb1818bc349369049c2 208 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 207 27.924 T 14-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 llmg_2269 c6058f532c4ffeb1818bc349369049c2 208 SUPERFAMILY SSF110395 2 206 1.44E-58 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 llmg_1276 e064ea26ec03709e8b11b736156df261 416 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 310 4.0E-77 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme llmg_1276 e064ea26ec03709e8b11b736156df261 416 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 41 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 llmg_1276 e064ea26ec03709e8b11b736156df261 416 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 323 415 2.1E-28 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 llmg_1276 e064ea26ec03709e8b11b736156df261 416 SUPERFAMILY SSF55021 333 410 3.62E-10 T 14-10-2018 llmg_1276 e064ea26ec03709e8b11b736156df261 416 SUPERFAMILY SSF53686 6 360 2.1E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme llmg_1276 e064ea26ec03709e8b11b736156df261 416 Gene3D G3DSA:3.40.1020.10 321 416 4.1E-6 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 llmg_1276 e064ea26ec03709e8b11b736156df261 416 Gene3D G3DSA:3.40.50.1100 16 320 5.4E-112 T 14-10-2018 llmg_1276 e064ea26ec03709e8b11b736156df261 416 Gene3D G3DSA:3.40.50.1100 50 149 5.4E-112 T 14-10-2018 llmg_1276 e064ea26ec03709e8b11b736156df261 416 TIGRFAM TIGR02079 THD1: threonine dehydratase 6 416 2.1E-175 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 llmg_1978 6b528358b168f15e9c186c586c837bd1 244 Gene3D G3DSA:3.40.50.300 5 244 2.0E-82 T 14-10-2018 llmg_1978 6b528358b168f15e9c186c586c837bd1 244 SUPERFAMILY SSF52540 5 239 3.51E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1978 6b528358b168f15e9c186c586c837bd1 244 Pfam PF00005 ABC transporter 21 169 5.5E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1978 6b528358b168f15e9c186c586c837bd1 244 SMART SM00382 30 217 3.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1978 6b528358b168f15e9c186c586c837bd1 244 PIRSF PIRSF039085 2 244 9.0E-117 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 llmg_1978 6b528358b168f15e9c186c586c837bd1 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1737 92cffe59bf59d05b3617c3a808421887 267 Pfam PF00561 alpha/beta hydrolase fold 25 249 1.1E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_1737 92cffe59bf59d05b3617c3a808421887 267 Gene3D G3DSA:3.40.50.1820 4 262 9.7E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1737 92cffe59bf59d05b3617c3a808421887 267 SUPERFAMILY SSF53474 3 262 1.2E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0897 132ef69f864c385ceaf21acc6a12a912 229 Pfam PF07553 Host cell surface-exposed lipoprotein 113 152 5.9E-12 T 14-10-2018 IPR011434 Domain of unknown function DUF1535 llmg_0897 132ef69f864c385ceaf21acc6a12a912 229 Pfam PF07553 Host cell surface-exposed lipoprotein 158 205 8.4E-16 T 14-10-2018 IPR011434 Domain of unknown function DUF1535 llmg_0897 132ef69f864c385ceaf21acc6a12a912 229 Gene3D G3DSA:1.10.10.10 110 153 4.2E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0897 132ef69f864c385ceaf21acc6a12a912 229 Gene3D G3DSA:1.10.10.10 157 205 9.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1026 21c441f87f6bb68f2bb5af702f8e65c0 247 SUPERFAMILY SSF53335 10 120 3.53E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1026 21c441f87f6bb68f2bb5af702f8e65c0 247 Pfam PF13649 Methyltransferase domain 50 120 7.6E-7 T 14-10-2018 llmg_1026 21c441f87f6bb68f2bb5af702f8e65c0 247 Gene3D G3DSA:3.40.50.150 2 240 6.9E-13 T 14-10-2018 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 SUPERFAMILY SSF47060 21 107 8.24E-34 T 14-10-2018 IPR009068 S15/NS1, RNA-binding llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 Pfam PF00312 Ribosomal protein S15 26 106 7.4E-34 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 23 107 9.5E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 SMART SM01387 26 106 1.2E-46 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 21 107 21.376 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 ProSitePatterns PS00362 Ribosomal protein S15 signature. 57 87 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 28 106 1.0E-40 T 14-10-2018 llmg_2078 3bd6c374b1aa145940053a1a0a2843d2 107 Gene3D G3DSA:1.10.287.10 20 107 5.6E-33 T 14-10-2018 llmg_2439 9e753072be85a32b6d6b28358312fc2b 378 Gene3D G3DSA:1.20.1250.20 10 369 8.5E-18 T 14-10-2018 llmg_2439 9e753072be85a32b6d6b28358312fc2b 378 SUPERFAMILY SSF103473 15 369 4.05E-29 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2439 9e753072be85a32b6d6b28358312fc2b 378 Pfam PF07690 Major Facilitator Superfamily 20 289 1.2E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1582 1a1f2c835db435a50a5ac01eb8685a45 87 SUPERFAMILY SSF55021 1 81 1.17E-18 T 14-10-2018 llmg_1582 1a1f2c835db435a50a5ac01eb8685a45 87 Hamap MF_01054 UPF0237 protein . 1 87 25.996 T 14-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type llmg_1582 1a1f2c835db435a50a5ac01eb8685a45 87 Gene3D G3DSA:3.30.70.260 1 87 9.6E-26 T 14-10-2018 llmg_1582 1a1f2c835db435a50a5ac01eb8685a45 87 Pfam PF13740 ACT domain 4 76 3.0E-15 T 14-10-2018 llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 PIRSF PIRSF039085 1 244 2.6E-98 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 SUPERFAMILY SSF52540 1 238 2.26E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 Gene3D G3DSA:3.40.50.300 1 248 2.7E-76 T 14-10-2018 llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 SMART SM00382 26 216 4.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1590 f197712b3e61e62a9861eccbf53730ca 250 Pfam PF00005 ABC transporter 17 168 2.4E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1081 752cce6058012cfe20205c0fe52b9b68 117 Pfam PF06993 Protein of unknown function (DUF1304) 9 113 2.1E-23 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 Gene3D G3DSA:3.90.226.10 5 174 1.4E-41 T 14-10-2018 llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 PRINTS PR00127 Clp protease catalytic subunit P signature 74 91 2.7E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 PRINTS PR00127 Clp protease catalytic subunit P signature 43 63 2.7E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 PRINTS PR00127 Clp protease catalytic subunit P signature 150 169 2.7E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 Pfam PF00574 Clp protease 37 173 3.3E-36 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA llmg_2097 ce56092a9cd4306d521386ac0b84dcba 234 SUPERFAMILY SSF52096 3 174 1.58E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily llmg_0196 f9c8d1b075454d83f728eee5edd585e9 326 Gene3D G3DSA:1.10.600.10 2 326 9.0E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_0196 f9c8d1b075454d83f728eee5edd585e9 326 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_0196 f9c8d1b075454d83f728eee5edd585e9 326 Pfam PF00348 Polyprenyl synthetase 31 254 4.6E-55 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 llmg_0196 f9c8d1b075454d83f728eee5edd585e9 326 SUPERFAMILY SSF48576 4 325 3.24E-70 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_0196 f9c8d1b075454d83f728eee5edd585e9 326 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_1342 123e875bec803078d11ca936dd4799a7 168 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 llmg_1342 123e875bec803078d11ca936dd4799a7 168 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.6E-9 T 14-10-2018 llmg_1342 123e875bec803078d11ca936dd4799a7 168 PRINTS PR00070 Dihydrofolate reductase signature 95 109 1.6E-9 T 14-10-2018 llmg_1342 123e875bec803078d11ca936dd4799a7 168 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.6E-9 T 14-10-2018 llmg_1342 123e875bec803078d11ca936dd4799a7 168 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.6E-9 T 14-10-2018 llmg_1342 123e875bec803078d11ca936dd4799a7 168 PIRSF PIRSF000194 1 167 7.8E-43 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 llmg_1342 123e875bec803078d11ca936dd4799a7 168 Pfam PF00186 Dihydrofolate reductase 1 164 4.9E-49 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 llmg_1342 123e875bec803078d11ca936dd4799a7 168 SUPERFAMILY SSF53597 1 164 1.96E-48 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_1342 123e875bec803078d11ca936dd4799a7 168 Gene3D G3DSA:3.40.430.10 1 167 1.7E-47 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 Gene3D G3DSA:1.50.10.10 1 298 1.0E-98 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 SUPERFAMILY SSF48208 6 297 4.28E-79 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 Pfam PF01270 Glycosyl hydrolases family 8 44 283 2.4E-20 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 PRINTS PR00735 Glycosyl hydrolase family 8 signature 52 65 5.6E-11 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 PRINTS PR00735 Glycosyl hydrolase family 8 signature 176 193 5.6E-11 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 PRINTS PR00735 Glycosyl hydrolase family 8 signature 112 130 5.6E-11 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1166 7064c1df95f33fbb5dea3d27872f4ad2 298 PRINTS PR00735 Glycosyl hydrolase family 8 signature 219 230 5.6E-11 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1814 a534b00dc472ce8a0c3782964482f221 455 Pfam PF03796 DnaB-like helicase C terminal domain 185 447 3.8E-108 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 llmg_1814 a534b00dc472ce8a0c3782964482f221 455 SUPERFAMILY SSF52540 183 441 7.04E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1814 a534b00dc472ce8a0c3782964482f221 455 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 449 1.7E-169 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 llmg_1814 a534b00dc472ce8a0c3782964482f221 455 Gene3D G3DSA:3.40.50.300 168 455 1.7E-102 T 14-10-2018 llmg_1814 a534b00dc472ce8a0c3782964482f221 455 Gene3D G3DSA:1.10.860.10 3 166 3.1E-55 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal llmg_1814 a534b00dc472ce8a0c3782964482f221 455 SUPERFAMILY SSF48024 8 120 2.62E-36 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 llmg_1814 a534b00dc472ce8a0c3782964482f221 455 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 1.6E-34 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 llmg_0519 375fc806cfd393197c6eb601e949687e 427 Hamap MF_00303 Trigger factor [tig]. 1 427 22.134 T 14-10-2018 IPR005215 Trigger factor GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 Gene3D G3DSA:3.10.50.40 152 248 7.5E-84 T 14-10-2018 llmg_0519 375fc806cfd393197c6eb601e949687e 427 PIRSF PIRSF003095 1 427 3.1E-126 T 14-10-2018 IPR005215 Trigger factor GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 6.9E-47 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 Gene3D G3DSA:1.10.3120.10 117 426 7.5E-84 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 SUPERFAMILY SSF54534 89 243 1.22E-34 T 14-10-2018 llmg_0519 375fc806cfd393197c6eb601e949687e 427 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 231 1.6E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain llmg_0519 375fc806cfd393197c6eb601e949687e 427 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 1.6E-39 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 TIGRFAM TIGR00115 tig: trigger factor 12 420 2.2E-130 T 14-10-2018 IPR005215 Trigger factor GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 SUPERFAMILY SSF102735 1 128 1.44E-34 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 llmg_0519 375fc806cfd393197c6eb601e949687e 427 SUPERFAMILY SSF109998 250 427 1.26E-39 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily llmg_0519 375fc806cfd393197c6eb601e949687e 427 Gene3D G3DSA:3.30.70.1050 1 116 5.8E-28 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Pfam PF08264 Anticodon-binding domain of tRNA 683 791 1.1E-16 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 829 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 828 22.45 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Gene3D G3DSA:3.10.330.110 567 618 0.0 T 14-10-2018 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 SUPERFAMILY SSF52374 2 657 4.8E-137 T 14-10-2018 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 399 2.6E-64 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 608 635 2.9E-6 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Gene3D G3DSA:3.10.20.590 769 829 2.4E-16 T 14-10-2018 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Gene3D G3DSA:3.40.50.620 31 566 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1741 6f9d205df277596f95da59c9af2e3822 829 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 SUPERFAMILY SSF47323 652 829 2.43E-32 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Gene3D G3DSA:3.90.740.10 226 410 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Pfam PF09334 tRNA synthetases class I (M) 39 165 3.5E-16 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 SUPERFAMILY SSF50677 225 411 9.73E-55 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 Gene3D G3DSA:1.10.730.10 6 762 0.0 T 14-10-2018 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_1741 6f9d205df277596f95da59c9af2e3822 829 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 2.7E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 llmg_2034 ec84e6008344a325dc13383472d29c5e 228 Gene3D G3DSA:3.40.50.1000 6 224 3.5E-47 T 14-10-2018 IPR023214 HAD superfamily llmg_2034 ec84e6008344a325dc13383472d29c5e 228 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 122 200 5.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_2034 ec84e6008344a325dc13383472d29c5e 228 SUPERFAMILY SSF56784 4 227 4.06E-38 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2034 ec84e6008344a325dc13383472d29c5e 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 64 203 3.5E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_2034 ec84e6008344a325dc13383472d29c5e 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 204 5.1E-21 T 14-10-2018 llmg_2034 ec84e6008344a325dc13383472d29c5e 228 Gene3D G3DSA:1.10.150.240 17 105 3.5E-47 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 SUPERFAMILY SSF50447 459 554 6.36E-13 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Gene3D G3DSA:3.30.930.10 3 244 1.1E-83 T 14-10-2018 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 854 2.9E-289 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 SUPERFAMILY SSF101353 249 440 1.05E-62 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 278 294 7.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 7.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 7.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 229 242 7.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 PRINTS PR00980 Alanyl-tRNA synthetase signature 302 315 7.1E-30 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 697 1.9E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Gene3D G3DSA:3.30.980.10 558 697 4.3E-48 T 14-10-2018 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 SUPERFAMILY SSF55186 554 709 3.14E-50 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Gene3D G3DSA:2.40.30.130 479 554 7.0E-9 T 14-10-2018 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Gene3D G3DSA:3.30.54.20 626 679 4.3E-48 T 14-10-2018 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 872 164.22 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Pfam PF02272 DHHA1 domain 736 869 1.3E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 SMART SM00863 655 698 5.9E-21 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Pfam PF01411 tRNA synthetases class II (A) 8 558 1.8E-184 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 SUPERFAMILY SSF55681 4 248 1.12E-80 T 14-10-2018 llmg_1906 6bcd3ccf107f40160d3d7283ee745ce4 872 Gene3D G3DSA:3.10.310.40 766 872 5.5E-24 T 14-10-2018 llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 250 2.0E-62 T 14-10-2018 llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 Gene3D G3DSA:3.40.50.720 1 252 9.4E-86 T 14-10-2018 llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 1.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 252 3.2E-107 T 14-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 SUPERFAMILY SSF51735 3 251 2.91E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 9.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 9.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1641 e7db77bfcbbf5d98510fcd2a44222d63 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 9.6E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1426 74db591efceaef3445295700a6f1b1d9 650 SUPERFAMILY SSF55604 9 84 2.62E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 Pfam PF02378 Phosphotransferase system, EIIC 128 410 2.7E-30 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 504 624 8.0E-45 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 Pfam PF00367 phosphotransferase system, EIIB 11 44 3.3E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 22 39 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 Gene3D G3DSA:2.70.70.10 493 649 2.8E-59 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_1426 74db591efceaef3445295700a6f1b1d9 650 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 504 627 7.9E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 Gene3D G3DSA:3.30.1360.60 2 79 4.5E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_1426 74db591efceaef3445295700a6f1b1d9 650 SUPERFAMILY SSF51261 499 647 5.76E-56 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_1426 74db591efceaef3445295700a6f1b1d9 650 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 566 578 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 SUPERFAMILY SSF55604 7 81 4.05E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 SUPERFAMILY SSF51261 469 622 1.92E-54 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_1045 d07978b589e90f36068c2926f19f605d 636 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 541 553 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 Gene3D G3DSA:2.70.70.10 467 624 3.5E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_1045 d07978b589e90f36068c2926f19f605d 636 Gene3D G3DSA:3.30.1360.60 1 78 2.6E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 478 602 2.7E-50 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 Pfam PF02378 Phosphotransferase system, EIIC 107 395 6.4E-26 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_1045 d07978b589e90f36068c2926f19f605d 636 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 4 623 1.6E-201 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 Pfam PF00367 phosphotransferase system, EIIB 9 42 4.2E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_1045 d07978b589e90f36068c2926f19f605d 636 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 479 599 2.1E-43 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_1045 d07978b589e90f36068c2926f19f605d 636 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 Gene3D G3DSA:3.50.50.60 8 301 7.5E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.8E-38 T 14-10-2018 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.8E-38 T 14-10-2018 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.8E-38 T 14-10-2018 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.8E-38 T 14-10-2018 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.8E-38 T 14-10-2018 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 Gene3D G3DSA:3.50.50.60 121 244 7.5E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 293 4.4E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 304 9.8E-115 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 1.6E-72 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_1588 2a5fd94aa462803f65f2a6f340b3b5a5 308 SUPERFAMILY SSF51905 1 301 1.08E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 Gene3D G3DSA:3.90.226.10 1 198 1.6E-77 T 14-10-2018 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 Pfam PF00574 Clp protease 13 195 2.1E-77 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 3.0E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 3.0E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 3.0E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 PRINTS PR00127 Clp protease catalytic subunit P signature 171 190 3.0E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 3.0E-43 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 91 102 - T 14-10-2018 IPR018215 ClpP, Ser active site llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 SUPERFAMILY SSF52096 12 196 1.76E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 196 39.309 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 llmg_0638 64b0094c04bebcf9bd92ae7f7ecb731e 199 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 14-10-2018 IPR033135 ClpP, histidine active site llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 7.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 SUPERFAMILY SSF47413 2 62 1.76E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 Gene3D G3DSA:3.40.50.2300 80 307 6.6E-29 T 14-10-2018 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 SUPERFAMILY SSF53822 61 310 7.28E-28 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 Pfam PF13377 Periplasmic binding protein-like domain 179 326 3.2E-13 T 14-10-2018 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 SMART SM00354 3 74 1.1E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 Gene3D G3DSA:1.10.260.40 1 63 1.2E-18 T 14-10-2018 llmg_1835 0abfdf1e30755fda1327f5a19777d542 329 Gene3D G3DSA:3.40.50.2300 169 288 6.6E-29 T 14-10-2018 llmg_0717 c9557094b824de7959e28d2788b86203 226 Pfam PF13610 DDE domain 72 202 6.9E-40 T 14-10-2018 IPR032874 DDE domain llmg_0717 c9557094b824de7959e28d2788b86203 226 SUPERFAMILY SSF53098 69 185 9.86E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0717 c9557094b824de7959e28d2788b86203 226 Gene3D G3DSA:3.30.420.10 63 198 8.9E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 PRINTS PR00688 Xylose isomerase signature 133 153 8.6E-46 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 PRINTS PR00688 Xylose isomerase signature 156 175 8.6E-46 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 PRINTS PR00688 Xylose isomerase signature 180 201 8.6E-46 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 PRINTS PR00688 Xylose isomerase signature 207 226 8.6E-46 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 PRINTS PR00688 Xylose isomerase signature 92 114 8.6E-46 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 SUPERFAMILY SSF51658 3 221 3.55E-81 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily llmg_1002 2b72c603a6bd7eed92abdeb8eacd74fa 231 Gene3D G3DSA:3.20.20.150 2 228 1.6E-92 T 14-10-2018 llmg_0389 2cb252666755f0d133bf2388934e4851 494 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 493 1.9E-79 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_0389 2cb252666755f0d133bf2388934e4851 494 SUPERFAMILY SSF50249 6 147 9.55E-45 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0389 2cb252666755f0d133bf2388934e4851 494 Gene3D G3DSA:2.40.50.140 7 147 2.1E-45 T 14-10-2018 llmg_0389 2cb252666755f0d133bf2388934e4851 494 Gene3D G3DSA:3.30.930.10 148 493 5.5E-130 T 14-10-2018 llmg_0389 2cb252666755f0d133bf2388934e4851 494 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 6 494 1.3E-215 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 494 44.21 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 5.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 5.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 5.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 5.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 378 394 5.9E-39 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 llmg_0389 2cb252666755f0d133bf2388934e4851 494 Pfam PF01336 OB-fold nucleic acid binding domain 63 137 4.5E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 llmg_0389 2cb252666755f0d133bf2388934e4851 494 SUPERFAMILY SSF55681 154 493 3.06E-119 T 14-10-2018 llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 2 276 1.8E-118 T 14-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 Pfam PF00005 ABC transporter 24 173 4.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 SMART SM00382 31 221 8.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 Gene3D G3DSA:3.40.50.300 1 278 2.9E-77 T 14-10-2018 llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0288 69a82a00da96eb18d1bec3938f8a330e 288 SUPERFAMILY SSF52540 1 237 5.32E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 SUPERFAMILY SSF52540 4 509 6.1E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 SUPERFAMILY SSF52540 1 220 2.32E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 Gene3D G3DSA:3.40.50.300 1 232 2.1E-45 T 14-10-2018 llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 PIRSF PIRSF003128 1 555 4.9E-175 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 8.8E-172 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 509 3.2E-17 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal llmg_1685 b207c34279f58f4ef3b0134318f5de86 555 Gene3D G3DSA:3.40.50.300 246 555 1.3E-51 T 14-10-2018 llmg_0117 a0e38486f34f55ff1f6ef998b0044176 207 SUPERFAMILY SSF56784 4 195 1.1E-27 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0117 a0e38486f34f55ff1f6ef998b0044176 207 Gene3D G3DSA:1.10.150.240 16 87 1.4E-57 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_0117 a0e38486f34f55ff1f6ef998b0044176 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 1.7E-12 T 14-10-2018 llmg_0117 a0e38486f34f55ff1f6ef998b0044176 207 Gene3D G3DSA:3.40.50.1000 3 194 1.4E-57 T 14-10-2018 IPR023214 HAD superfamily llmg_0117 a0e38486f34f55ff1f6ef998b0044176 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 130 190 1.5E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0522 807e0ce778346d93c67154beea4229fb 247 Pfam PF01380 SIS domain 107 205 1.0E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_0522 807e0ce778346d93c67154beea4229fb 247 Gene3D G3DSA:1.10.10.10 1 66 8.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0522 807e0ce778346d93c67154beea4229fb 247 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 60 3.4E-8 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_0522 807e0ce778346d93c67154beea4229fb 247 Gene3D G3DSA:3.40.50.10490 75 245 2.4E-25 T 14-10-2018 llmg_0522 807e0ce778346d93c67154beea4229fb 247 SUPERFAMILY SSF46689 2 64 3.4E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0522 807e0ce778346d93c67154beea4229fb 247 SUPERFAMILY SSF53697 82 230 2.74E-24 T 14-10-2018 llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 PIRSF PIRSF002741 25 73 7.2 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 PIRSF PIRSF002741 108 590 3.0E-54 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 SUPERFAMILY SSF53850 91 584 7.29E-83 T 14-10-2018 llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 514 1.6E-68 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 Gene3D G3DSA:3.10.105.10 326 561 2.2E-93 T 14-10-2018 llmg_2024 ae6d1db62503e28e86e61d506137e9ee 600 Gene3D G3DSA:3.40.190.10 25 325 1.5E-36 T 14-10-2018 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 Pfam PF00480 ROK family 7 319 3.5E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 ProSitePatterns PS01125 ROK family signature. 140 167 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 Gene3D G3DSA:3.30.420.40 7 316 2.3E-113 T 14-10-2018 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 Gene3D G3DSA:3.30.420.40 131 303 2.3E-113 T 14-10-2018 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 318 1.5E-102 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 llmg_2299 7a63ab1639fd2b5410eee9963ea7833a 323 SUPERFAMILY SSF53067 5 320 8.92E-70 T 14-10-2018 llmg_0753 01c0da81fd84002a84cd837f80950299 246 Pfam PF01209 ubiE/COQ5 methyltransferase family 1 233 1.5E-112 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 llmg_0753 01c0da81fd84002a84cd837f80950299 246 Gene3D G3DSA:3.40.50.150 15 234 1.1E-70 T 14-10-2018 llmg_0753 01c0da81fd84002a84cd837f80950299 246 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 4 233 36.314 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 llmg_0753 01c0da81fd84002a84cd837f80950299 246 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 llmg_0753 01c0da81fd84002a84cd837f80950299 246 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 llmg_0753 01c0da81fd84002a84cd837f80950299 246 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 2.7E-78 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 llmg_0753 01c0da81fd84002a84cd837f80950299 246 SUPERFAMILY SSF53335 6 223 4.87E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 335 39.201 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 SUPERFAMILY SSF51735 2 174 1.05E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 Gene3D G3DSA:3.30.360.10 145 309 5.2E-107 T 14-10-2018 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 Gene3D G3DSA:3.40.50.720 3 327 5.2E-107 T 14-10-2018 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 SUPERFAMILY SSF55347 147 309 3.86E-48 T 14-10-2018 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 156 312 1.7E-24 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 6.9E-27 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 338 5.9E-123 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_1758 2a13812a45fe4c8695771a8bd793f0dd 340 SMART SM00859 3 137 4.5E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 llmg_1660 bb8afeca6614ac98a508cb2b78741bc0 177 SUPERFAMILY SSF46689 5 69 1.49E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1660 bb8afeca6614ac98a508cb2b78741bc0 177 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_1660 bb8afeca6614ac98a508cb2b78741bc0 177 Gene3D G3DSA:1.10.357.10 2 177 4.0E-37 T 14-10-2018 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.258 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.7E-106 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 SUPERFAMILY SSF52313 6 229 2.35E-95 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 Pfam PF00318 Ribosomal protein S2 9 224 8.9E-97 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 Gene3D G3DSA:3.40.50.10490 8 219 7.9E-91 T 14-10-2018 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.7E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 Gene3D G3DSA:1.10.287.610 103 150 7.9E-91 T 14-10-2018 llmg_2430 9d95a4bb1d7d7ec8029d56693216484c 255 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 llmg_2123 451523ab6e26fe09c129968d10d5f919 124 Pfam PF06356 Protein of unknown function (DUF1064) 8 115 1.3E-29 T 14-10-2018 IPR009414 Protein of unknown function DUF1064 llmg_2122 1fdcb7360a7e0399ee96523c5ba004e8 79 Pfam PF06275 Protein of unknown function (DUF1031) 1 79 3.9E-45 T 14-10-2018 IPR009376 Protein of unknown function DUF1031 llmg_1458 1c7a96a54f56d8731fc6f3f2893963a5 339 SUPERFAMILY SSF161098 97 279 6.28E-20 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1458 1c7a96a54f56d8731fc6f3f2893963a5 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 298 1.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1458 1c7a96a54f56d8731fc6f3f2893963a5 339 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 71 1.6E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain llmg_1458 1c7a96a54f56d8731fc6f3f2893963a5 339 Gene3D G3DSA:1.10.3720.10 95 293 1.2E-15 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1645 4cff7b896f0b0d7916dc7761e8331d51 156 SUPERFAMILY SSF50249 18 107 8.21E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1645 4cff7b896f0b0d7916dc7761e8331d51 156 Pfam PF00575 S1 RNA binding domain 19 100 1.5E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1645 4cff7b896f0b0d7916dc7761e8331d51 156 SMART SM00316 20 100 1.9E-17 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1645 4cff7b896f0b0d7916dc7761e8331d51 156 Gene3D G3DSA:2.40.50.140 17 110 2.1E-22 T 14-10-2018 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 PIRSF PIRSF006816 2 262 8.2E-76 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 221 260 8.4E-16 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Pfam PF00175 Oxidoreductase NAD-binding domain 116 207 8.9E-5 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Gene3D G3DSA:2.40.30.10 1 100 1.1E-26 T 14-10-2018 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 SUPERFAMILY SSF52343 97 260 1.01E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Gene3D G3DSA:2.10.240.10 221 262 1.5E-20 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 5 262 36.17 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 Gene3D G3DSA:3.40.50.80 104 220 1.3E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 8.1E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 PRINTS PR00409 Phthalate dioxygenase reductase family signature 114 133 8.1E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 PRINTS PR00409 Phthalate dioxygenase reductase family signature 38 50 8.1E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 llmg_1105 4762339c9dca4ce9588879dd287ec28b 262 SUPERFAMILY SSF63380 5 102 2.15E-22 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel llmg_0573 5183b5170fcf669acacf7c59244a434f 108 Gene3D G3DSA:3.90.80.10 2 105 1.7E-7 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 llmg_0573 5183b5170fcf669acacf7c59244a434f 108 SUPERFAMILY SSF50324 8 103 8.11E-14 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 llmg_1368 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1368 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_1368 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0622 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0622 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_0622 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1655 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1655 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_1655 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1438 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1438 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_1438 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0648 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0648 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_0648 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0720 006d66c9514571c9b0b4899c4661e1ad 86 Pfam PF01527 Transposase 3 69 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0720 006d66c9514571c9b0b4899c4661e1ad 86 Gene3D G3DSA:1.10.10.60 6 84 8.9E-7 T 14-10-2018 llmg_0720 006d66c9514571c9b0b4899c4661e1ad 86 SUPERFAMILY SSF46689 2 83 1.58E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 10 498 4.3E-123 T 14-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 SUPERFAMILY SSF53335 11 513 1.15E-129 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0659 476f0437b72dd3a68a78d09296658c25 545 Gene3D G3DSA:1.20.1260.30 5 191 9.0E-58 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily llmg_0659 476f0437b72dd3a68a78d09296658c25 545 Pfam PF02384 N-6 DNA Methylase 175 482 2.6E-105 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 Pfam PF12161 HsdM N-terminal domain 11 163 3.5E-22 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain llmg_0659 476f0437b72dd3a68a78d09296658c25 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 299 311 8.8E-22 T 14-10-2018 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 198 214 8.8E-22 T 14-10-2018 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 226 240 8.8E-22 T 14-10-2018 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 335 359 8.8E-22 T 14-10-2018 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 llmg_0659 476f0437b72dd3a68a78d09296658c25 545 Gene3D G3DSA:3.40.50.150 196 476 1.6E-92 T 14-10-2018 llmg_2517 d23a89ededb3f1fb487dcb125372a893 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 61 1.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_2517 d23a89ededb3f1fb487dcb125372a893 204 SUPERFAMILY SSF46689 7 74 1.21E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2517 d23a89ededb3f1fb487dcb125372a893 204 Gene3D G3DSA:1.10.357.10 5 188 1.2E-39 T 14-10-2018 llmg_2517 d23a89ededb3f1fb487dcb125372a893 204 Pfam PF14278 Transcriptional regulator C-terminal region 94 169 2.2E-7 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 Gene3D G3DSA:3.60.21.10 2 310 9.8E-85 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 SUPERFAMILY SSF55816 308 519 1.44E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 Pfam PF00149 Calcineurin-like phosphoesterase 5 240 1.1E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 Gene3D G3DSA:3.90.780.10 312 520 1.8E-62 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 Pfam PF02872 5'-nucleotidase, C-terminal domain 324 482 1.2E-25 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 ProSitePatterns PS00786 5'-nucleotidase signature 2. 91 102 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 SUPERFAMILY SSF56300 2 310 3.63E-70 T 14-10-2018 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 187 204 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 223 246 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 366 389 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 249 269 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 456 475 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0316 53ace8c33802b58d1cff759ebd9a5e79 520 PRINTS PR01607 Apyrase family signature 2 20 2.5E-23 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 llmg_0910 0c298ff7073890e9bd73a085374283d7 413 Gene3D G3DSA:1.10.3430.10 1 409 1.2E-137 T 14-10-2018 IPR029020 Ammonium/urea transporter llmg_0910 0c298ff7073890e9bd73a085374283d7 413 ProSitePatterns PS01219 Ammonium transporters signature. 159 184 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 llmg_0910 0c298ff7073890e9bd73a085374283d7 413 SUPERFAMILY SSF111352 2 386 1.57E-123 T 14-10-2018 llmg_0910 0c298ff7073890e9bd73a085374283d7 413 TIGRFAM TIGR00836 amt: ammonium transporter 6 405 8.5E-134 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 llmg_0910 0c298ff7073890e9bd73a085374283d7 413 Pfam PF00909 Ammonium Transporter Family 7 405 3.8E-119 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Gene3D G3DSA:3.30.420.40 10 363 8.5E-92 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Gene3D G3DSA:3.30.420.40 195 349 8.5E-92 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 SMART SM00842 7 194 2.8E-81 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 PIRSF PIRSF003101 1 455 3.2E-126 T 14-10-2018 IPR020823 Cell division protein FtsA llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Gene3D G3DSA:3.30.1490.110 81 167 8.5E-92 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Pfam PF11983 Membrane-attachment and polymerisation-promoting switch 377 456 1.2E-11 T 14-10-2018 IPR021873 Cell division protein FtsA, C-terminal llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 455 27.609 T 14-10-2018 IPR020823 Cell division protein FtsA llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 SUPERFAMILY SSF53067 196 365 7.5E-36 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Pfam PF14450 Cell division protein FtsA 9 179 2.2E-8 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 SUPERFAMILY SSF53067 5 195 5.28E-53 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Pfam PF02491 SHS2 domain inserted in FTSA 83 159 1.7E-19 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Gene3D G3DSA:3.90.640.10 233 298 8.5E-92 T 14-10-2018 llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 9.3E-93 T 14-10-2018 IPR020823 Cell division protein FtsA llmg_2061 c8d3b06ed0626113c8c5fa4b4ed19ba7 456 Pfam PF14450 Cell division protein FtsA 205 365 8.6E-19 T 14-10-2018 llmg_2504 259c72057f45e920839695f330e2e326 240 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 81 89 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_2504 259c72057f45e920839695f330e2e326 240 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 227 1.4E-60 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_2504 259c72057f45e920839695f330e2e326 240 SUPERFAMILY SSF53681 5 113 7.68E-29 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_2504 259c72057f45e920839695f330e2e326 240 SUPERFAMILY SSF53681 117 211 2.45E-23 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_2504 259c72057f45e920839695f330e2e326 240 Gene3D G3DSA:3.40.50.1860 107 219 7.1E-62 T 14-10-2018 llmg_2504 259c72057f45e920839695f330e2e326 240 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 225 2.0E-70 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 llmg_2504 259c72057f45e920839695f330e2e326 240 Gene3D G3DSA:3.40.50.1860 7 106 7.1E-62 T 14-10-2018 llmg_0226 a10a1ee29ebf60be56aca4aba6f8b092 599 Gene3D G3DSA:2.60.40.10 385 541 3.0E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 SUPERFAMILY SSF53901 2 166 2.3E-39 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 381 2.0E-159 T 14-10-2018 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 258 363 2.2E-15 T 14-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 180 248 2.8E-11 T 14-10-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 Gene3D G3DSA:3.40.47.10 173 320 1.1E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 SUPERFAMILY SSF53901 168 383 5.76E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 165 8.5E-18 T 14-10-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 llmg_0929 e24f9d15ef8eff147c6a40240a1fc07a 384 Gene3D G3DSA:3.40.47.10 3 349 1.1E-143 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0366 1cce404f04375293d55a8525025a84a8 349 SUPERFAMILY SSF52540 6 256 1.74E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0366 1cce404f04375293d55a8525025a84a8 349 Gene3D G3DSA:3.40.50.300 4 332 2.2E-96 T 14-10-2018 llmg_0366 1cce404f04375293d55a8525025a84a8 349 SMART SM00382 35 243 4.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0366 1cce404f04375293d55a8525025a84a8 349 Pfam PF00005 ABC transporter 27 185 4.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0366 1cce404f04375293d55a8525025a84a8 349 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 4.0E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_0366 1cce404f04375293d55a8525025a84a8 349 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 298 6.7E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 ProSitePatterns PS00501 Signal peptidases I serine active site. 33 40 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 SUPERFAMILY SSF51306 22 208 3.66E-49 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 203 1.1E-40 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 74 86 8.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 162 181 8.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 8.9E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 ProSitePatterns PS00760 Signal peptidases I lysine active site. 76 88 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 Pfam PF00717 Peptidase S24-like 31 98 1.6E-16 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C llmg_2550 48d7eac68cea06b530b95a51b0cc888f 208 Gene3D G3DSA:2.10.109.10 50 207 6.2E-34 T 14-10-2018 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 Gene3D G3DSA:3.20.20.210 5 516 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 PIRSF PIRSF000382 1 754 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 312 8.5E-114 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 750 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 Gene3D G3DSA:3.20.20.210 384 749 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 SUPERFAMILY SSF51726 5 375 1.83E-90 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 SUPERFAMILY SSF51726 389 750 2.49E-107 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 423 746 2.8E-140 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_1225 4d30ca4778c5b67677aac10bb7e0b730 757 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 751 34.042 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 Gene3D G3DSA:3.40.1180.10 3 243 1.7E-87 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 Pfam PF01255 Putative undecaprenyl diphosphate synthase 21 241 4.6E-75 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 14 241 2.7E-75 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 187 204 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 SUPERFAMILY SSF64005 14 237 1.83E-76 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 llmg_2415 36775167a3b04c960386b4d4e8f7195a 244 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 14 242 37.565 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 llmg_1907 f1ea793e83b266b0d4ecd49dd87feeec 308 Pfam PF13145 PPIC-type PPIASE domain 158 239 3.5E-7 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 llmg_1907 f1ea793e83b266b0d4ecd49dd87feeec 308 Hamap MF_01145 Foldase protein PrsA [prsA]. 5 299 15.598 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 llmg_1907 f1ea793e83b266b0d4ecd49dd87feeec 308 Gene3D G3DSA:1.10.4030.30 35 195 9.9E-8 T 14-10-2018 llmg_1907 f1ea793e83b266b0d4ecd49dd87feeec 308 SUPERFAMILY SSF109998 33 179 5.1E-17 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily llmg_0816 67b5fa34f2bc99dd22c8153e256c7c21 139 Gene3D G3DSA:2.70.40.10 1 137 2.1E-40 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_0816 67b5fa34f2bc99dd22c8153e256c7c21 139 SUPERFAMILY SSF51283 4 137 6.28E-36 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_0816 67b5fa34f2bc99dd22c8153e256c7c21 139 Pfam PF00692 dUTPase 11 137 2.7E-20 T 14-10-2018 IPR029054 dUTPase-like llmg_0816 67b5fa34f2bc99dd22c8153e256c7c21 139 TIGRFAM TIGR00576 dut: dUTP diphosphatase 3 138 4.3E-43 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SUPERFAMILY SSF52518 3 255 3.53E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 955 1064 1.5E-10 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 744 755 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 PIRSF PIRSF000159 1 1174 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SMART SM00890 619 680 2.6E-16 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF10371 Domain of unknown function 629 679 7.1E-12 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 421 602 3.4E-32 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SUPERFAMILY SSF53323 412 660 3.79E-76 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Gene3D G3DSA:3.30.70.20 670 783 2.0E-40 T 14-10-2018 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 268 370 9.5E-21 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF12838 4Fe-4S dicluster domain 689 756 3.8E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Gene3D G3DSA:3.40.50.970 785 1168 6.5E-153 T 14-10-2018 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Gene3D G3DSA:3.40.50.920 256 406 4.2E-56 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Gene3D G3DSA:3.40.920.10 411 620 3.1E-84 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SUPERFAMILY SSF52518 785 1167 3.37E-117 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 3 1166 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Gene3D G3DSA:3.40.50.970 1 255 2.7E-100 T 14-10-2018 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 15 244 3.7E-70 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SUPERFAMILY SSF54862 667 830 3.07E-21 T 14-10-2018 llmg_0447 29aedef38189f9ae712eddf351888a7a 1223 SUPERFAMILY SSF52922 257 408 2.0E-46 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 Pfam PF13416 Bacterial extracellular solute-binding protein 51 318 5.2E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PIRSF PIRSF019574 1 355 1.1E-119 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 57 78 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 100 113 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 84 98 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 41 57 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 131 147 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 254 273 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 299 325 4.2E-58 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 Gene3D G3DSA:3.40.190.10 140 328 4.0E-115 T 14-10-2018 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 Gene3D G3DSA:3.40.190.10 40 321 4.0E-115 T 14-10-2018 llmg_1325 23a0a3c6db26640bab8cd19afdd95e80 355 SUPERFAMILY SSF53850 37 352 3.2E-87 T 14-10-2018 llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 Gene3D G3DSA:2.160.10.10 1 199 8.1E-58 T 14-10-2018 llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 SUPERFAMILY SSF51161 3 191 1.26E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 SMART SM01266 4 58 3.2E-6 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 Pfam PF12464 Maltose acetyltransferase 6 57 1.7E-5 T 14-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 llmg_0742 f70999218ccbb1bc144ddaaa7abeed48 201 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 164 5.4E-8 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_2086 8d22f1ded5d06bf3bdc5f7f1d89b35d1 1617 Gene3D G3DSA:2.60.40.1830 1509 1612 1.2E-36 T 14-10-2018 llmg_2086 8d22f1ded5d06bf3bdc5f7f1d89b35d1 1617 SUPERFAMILY SSF49835 1513 1611 2.62E-33 T 14-10-2018 IPR008982 Adenovirus pIV-like, attachment domain GO:0007155|GO:0019058|GO:0019062 llmg_2086 8d22f1ded5d06bf3bdc5f7f1d89b35d1 1617 Gene3D G3DSA:1.20.5.320 739 795 5.0E-7 T 14-10-2018 llmg_2086 8d22f1ded5d06bf3bdc5f7f1d89b35d1 1617 Gene3D G3DSA:1.20.5.320 498 554 2.9E-7 T 14-10-2018 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Pfam PF00575 S1 RNA binding domain 635 705 8.1E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SUPERFAMILY SSF47781 455 543 1.19E-25 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SMART SM00316 636 707 6.8E-21 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Gene3D G3DSA:1.10.3500.10 110 483 7.2E-144 T 14-10-2018 IPR023323 Tex-like domain superfamily llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Gene3D G3DSA:1.10.10.650 1 107 5.0E-34 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SUPERFAMILY SSF47781 545 618 1.07E-14 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SUPERFAMILY SSF158832 4 303 1.14E-100 T 14-10-2018 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Pfam PF12836 Helix-hairpin-helix motif 476 540 6.8E-27 T 14-10-2018 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SUPERFAMILY SSF53098 304 454 1.59E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Pfam PF16921 Tex protein YqgF-like domain 308 436 1.5E-53 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Gene3D G3DSA:1.10.150.310 484 617 2.7E-45 T 14-10-2018 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SMART SM00732 308 409 3.8E-39 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Pfam PF09371 Tex-like protein N-terminal domain 7 187 9.8E-62 T 14-10-2018 IPR018974 Tex-like protein, N-terminal llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Gene3D G3DSA:2.40.50.140 620 708 3.0E-21 T 14-10-2018 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 Gene3D G3DSA:3.30.420.140 307 436 7.2E-144 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 llmg_0297 a39c062835d4d6b5f0ecda89f7186202 713 SUPERFAMILY SSF50249 623 707 1.42E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 Gene3D G3DSA:3.40.190.10 93 285 2.4E-22 T 14-10-2018 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 SUPERFAMILY SSF53850 89 289 5.25E-19 T 14-10-2018 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 SUPERFAMILY SSF46785 1 85 1.97E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 Pfam PF03466 LysR substrate binding domain 88 289 7.6E-23 T 14-10-2018 IPR005119 LysR, substrate-binding llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 Gene3D G3DSA:3.40.190.10 163 264 2.4E-22 T 14-10-2018 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 Gene3D G3DSA:1.10.10.10 1 92 9.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_2067 96f0cb62da21cb43049cc30f8a768bd6 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 Pfam PF00889 Elongation factor TS 70 322 1.1E-63 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 Gene3D G3DSA:1.10.8.10 1 55 3.5E-23 T 14-10-2018 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 SUPERFAMILY SSF46934 1 55 1.83E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 Hamap MF_00050 Elongation factor Ts [tsf]. 1 339 66.056 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 Gene3D G3DSA:1.10.286.20 237 278 8.0E-6 T 14-10-2018 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 337 1.3E-91 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 Gene3D G3DSA:3.30.479.20 56 147 4.2E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 llmg_2429 a4bafb2bc0ec5323d66b5af802cffa63 342 SUPERFAMILY SSF54713 56 322 1.18E-34 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 SUPERFAMILY SSF52540 256 455 1.11E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 429 442 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 182 456 61.564 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 Gene3D G3DSA:1.20.120.140 157 454 7.1E-106 T 14-10-2018 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 Pfam PF00448 SRP54-type protein, GTPase domain 256 455 2.6E-78 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 183 455 3.4E-108 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 SUPERFAMILY SSF47364 156 233 9.16E-18 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 SMART SM00963 158 239 3.8E-18 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 SMART SM00962 255 456 8.3E-116 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 SMART SM00382 254 434 2.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 Gene3D G3DSA:3.40.50.300 247 444 7.1E-106 T 14-10-2018 llmg_1744 d0b74f73151d1a7eb9566b8c7adbb98b 459 Pfam PF02881 SRP54-type protein, helical bundle domain 169 233 2.0E-12 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0479 dc42d2a3781520306bc95cc9c08daa21 184 Pfam PF03641 Possible lysine decarboxylase 45 173 9.1E-34 T 14-10-2018 IPR031100 LOG family llmg_0479 dc42d2a3781520306bc95cc9c08daa21 184 Gene3D G3DSA:3.40.50.450 1 183 1.7E-49 T 14-10-2018 llmg_0479 dc42d2a3781520306bc95cc9c08daa21 184 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 173 2.5E-39 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG llmg_0479 dc42d2a3781520306bc95cc9c08daa21 184 SUPERFAMILY SSF102405 1 175 4.88E-45 T 14-10-2018 llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 Gene3D G3DSA:3.40.50.300 1 247 4.6E-53 T 14-10-2018 llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 SMART SM00382 28 229 1.5E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 243 4.9E-111 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 SUPERFAMILY SSF52540 3 231 9.38E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1974 7e4027a3a9f58044db3a69fb12c946ba 256 Pfam PF00005 ABC transporter 19 171 2.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1324 567079ad446fcb685ec984bed48ef022 151 Pfam PF12833 Helix-turn-helix domain 67 143 8.3E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_1324 567079ad446fcb685ec984bed48ef022 151 Gene3D G3DSA:1.10.10.60 34 93 1.2E-5 T 14-10-2018 llmg_1324 567079ad446fcb685ec984bed48ef022 151 SMART SM00342 60 143 1.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_1324 567079ad446fcb685ec984bed48ef022 151 Gene3D G3DSA:1.10.10.60 94 148 2.0E-17 T 14-10-2018 llmg_1324 567079ad446fcb685ec984bed48ef022 151 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 127 143 3.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 llmg_1324 567079ad446fcb685ec984bed48ef022 151 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 112 127 3.7E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 llmg_1324 567079ad446fcb685ec984bed48ef022 151 SUPERFAMILY SSF46689 96 146 1.25E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 7 303 8.9E-117 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 Pfam PF01180 Dihydroorotate dehydrogenase 7 291 5.9E-99 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 7 306 41.142 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 Gene3D G3DSA:3.20.20.70 1 311 1.4E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 SUPERFAMILY SSF51395 4 303 1.59E-85 T 14-10-2018 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 PIRSF PIRSF000164 1 304 7.8E-82 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 llmg_1106 a9fd9393edead34459fa8ec2ec2e3ad9 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 43 62 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Pfam PF03144 Elongation factor Tu domain 2 227 297 5.6E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Gene3D G3DSA:2.40.50.250 491 607 2.2E-125 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 SUPERFAMILY SSF52540 4 214 2.83E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2292 d67ef28e41c75e257b2358278efb91db 613 SMART SM00838 403 488 3.5E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Pfam PF14492 Elongation Factor G, domain II 336 385 8.9E-7 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 SUPERFAMILY SSF54980 406 521 1.2E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_2292 d67ef28e41c75e257b2358278efb91db 613 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 PRINTS PR00315 GTP-binding elongation factor signature 77 87 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 PRINTS PR00315 GTP-binding elongation factor signature 57 65 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 PRINTS PR00315 GTP-binding elongation factor signature 129 138 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 PRINTS PR00315 GTP-binding elongation factor signature 93 104 1.5E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 1.2E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 50 65 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Gene3D G3DSA:3.40.50.300 8 206 6.0E-66 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Pfam PF00679 Elongation factor G C-terminus 405 482 1.7E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like llmg_2292 d67ef28e41c75e257b2358278efb91db 613 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 11 607 1.9E-284 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Gene3D G3DSA:3.30.70.870 314 598 2.2E-125 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 149 1.7E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Gene3D G3DSA:2.40.30.10 207 307 9.8E-32 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 Gene3D G3DSA:3.30.70.240 397 490 2.2E-125 T 14-10-2018 llmg_2292 d67ef28e41c75e257b2358278efb91db 613 SUPERFAMILY SSF50447 158 307 5.41E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_2292 d67ef28e41c75e257b2358278efb91db 613 SUPERFAMILY SSF54980 310 395 3.6E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:1.20.1110.10 37 290 3.7E-64 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:3.40.1110.10 304 323 3.7E-64 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:3.40.1110.10 398 443 2.4E-53 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Pfam PF00702 haloacid dehalogenase-like hydrolase 290 549 2.4E-27 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:3.40.50.1000 291 303 3.7E-64 T 14-10-2018 IPR023214 HAD superfamily llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:3.40.50.1000 444 579 2.4E-53 T 14-10-2018 IPR023214 HAD superfamily llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Pfam PF00122 E1-E2 ATPase 93 274 2.9E-48 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 142 156 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 294 308 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 447 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 554 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 570 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 1.5E-23 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 SUPERFAMILY SSF81653 97 189 4.05E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 SUPERFAMILY SSF81665 4 759 4.32E-56 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 SUPERFAMILY SSF56784 292 634 1.73E-38 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 68 326 1.7E-35 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 507 618 9.6E-25 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:2.70.150.10 4 195 3.7E-64 T 14-10-2018 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 296 302 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 400 418 3.0E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 535 551 3.0E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 566 591 3.0E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 507 523 3.0E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0547 ebd2975129fe31d13d45e3b96edaa0ba 775 Gene3D G3DSA:1.20.1110.10 580 653 2.4E-53 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 SMART SM00937 63 178 5.5E-60 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 llmg_0557 7763f74689853753f2a008631e01680b 357 Gene3D G3DSA:3.30.70.1660 107 214 2.9E-43 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 SUPERFAMILY SSF75620 8 352 1.7E-123 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 356 38.408 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 llmg_0557 7763f74689853753f2a008631e01680b 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 llmg_0557 7763f74689853753f2a008631e01680b 357 Gene3D G3DSA:1.20.58.410 1 102 6.7E-6 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 356 3.9E-154 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 llmg_0557 7763f74689853753f2a008631e01680b 357 Gene3D G3DSA:3.30.160.20 215 286 2.5E-30 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 Pfam PF00472 RF-1 domain 211 320 1.5E-36 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 llmg_0557 7763f74689853753f2a008631e01680b 357 Gene3D G3DSA:3.30.70.1660 287 357 6.8E-18 T 14-10-2018 llmg_0557 7763f74689853753f2a008631e01680b 357 Pfam PF03462 PCRF domain 10 203 2.9E-69 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 Pfam PF07690 Major Facilitator Superfamily 19 400 2.9E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 Gene3D G3DSA:1.20.1250.20 251 451 8.1E-22 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 SUPERFAMILY SSF103473 9 449 2.09E-56 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_1104 193e245147b94d12dd11b0465053e2d8 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 4.1E-12 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 4.1E-12 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 293 317 4.1E-12 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 223 241 4.1E-12 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 4.1E-12 T 14-10-2018 llmg_1104 193e245147b94d12dd11b0465053e2d8 454 Gene3D G3DSA:1.20.1720.10 13 243 1.2E-33 T 14-10-2018 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 5 114 29.309 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 Gene3D G3DSA:3.90.470.10 2 115 5.4E-48 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 Pfam PF00237 Ribosomal protein L22p/L17e 9 111 1.5E-38 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 ProSitePatterns PS00464 Ribosomal protein L22 signature. 87 111 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 SUPERFAMILY SSF54843 6 115 3.14E-43 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2378 234a4b00ef0138b0230f086ccf54aa52 115 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 9 111 2.1E-44 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 192 35.053 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 Gene3D G3DSA:3.30.460.40 191 348 1.7E-5 T 14-10-2018 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 188 6.5E-58 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 SUPERFAMILY SSF51366 1 189 7.53E-51 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 SUPERFAMILY SSF81301 195 321 7.36E-6 T 14-10-2018 llmg_1039 e06105fbd99bbfa184d921863712fbaf 352 Gene3D G3DSA:3.20.20.70 1 190 3.5E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 SMART SM00862 152 228 2.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 SUPERFAMILY SSF46894 134 228 5.26E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 SMART SM00448 2 112 6.2E-48 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 9.1E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 Gene3D G3DSA:3.40.50.2300 1 128 9.1E-40 T 14-10-2018 llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 Gene3D G3DSA:1.10.10.10 129 233 1.5E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 SUPERFAMILY SSF52172 1 122 4.13E-43 T 14-10-2018 IPR011006 CheY-like superfamily llmg_0414 5cd82fd2ace038e7593e8d48b07a4247 233 Pfam PF00072 Response regulator receiver domain 4 113 2.2E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 Pfam PF00005 ABC transporter 29 182 8.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 SMART SM00382 37 232 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 SUPERFAMILY SSF52540 7 254 6.17E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 266 4.9E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_0367 1c38e3fd9eef428070d75ef71289f7a6 312 Gene3D G3DSA:3.40.50.300 5 310 2.9E-88 T 14-10-2018 llmg_0022 047304fca96acf53d3dba982fed377c3 607 Gene3D G3DSA:3.40.50.2300 504 607 5.4E-18 T 14-10-2018 llmg_0022 047304fca96acf53d3dba982fed377c3 607 Gene3D G3DSA:3.40.50.2300 389 492 1.7E-30 T 14-10-2018 llmg_0022 047304fca96acf53d3dba982fed377c3 607 SUPERFAMILY SSF52794 399 488 1.33E-20 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_0022 047304fca96acf53d3dba982fed377c3 607 Pfam PF02378 Phosphotransferase system, EIIC 19 290 1.3E-16 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_0022 047304fca96acf53d3dba982fed377c3 607 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 402 484 2.8E-6 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 llmg_0022 047304fca96acf53d3dba982fed377c3 607 SUPERFAMILY SSF52794 525 604 2.44E-8 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_2214 3f9934f25e0b1bd93c1e285b6cd8657a 309 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 247 302 3.6E-19 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 llmg_2214 3f9934f25e0b1bd93c1e285b6cd8657a 309 PIRSF PIRSF006483 15 309 1.8E-90 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_2214 3f9934f25e0b1bd93c1e285b6cd8657a 309 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 35 241 1.2E-59 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_2214 3f9934f25e0b1bd93c1e285b6cd8657a 309 Gene3D G3DSA:3.30.70.120 219 295 3.8E-17 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 Gene3D G3DSA:3.20.20.100 1 280 1.5E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 SUPERFAMILY SSF51430 1 269 2.1E-79 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PRINTS PR00069 Aldo-keto reductase signature 192 216 1.0E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PRINTS PR00069 Aldo-keto reductase signature 119 136 1.0E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PRINTS PR00069 Aldo-keto reductase signature 90 108 1.0E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PRINTS PR00069 Aldo-keto reductase signature 36 60 1.0E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PRINTS PR00069 Aldo-keto reductase signature 153 182 1.0E-41 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PIRSF PIRSF000097 107 277 1.1E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 PIRSF PIRSF000097 1 111 1.1E-30 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_2065 4eb201026ed759a8807b7064b454c2f3 281 Pfam PF00248 Aldo/keto reductase family 28 257 1.1E-39 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain llmg_2225 aba05b9d9b945d28c53f0380152c2f58 298 Pfam PF13413 Helix-turn-helix domain 11 70 5.1E-17 T 14-10-2018 llmg_2225 aba05b9d9b945d28c53f0380152c2f58 298 Gene3D G3DSA:1.10.260.40 2 107 1.1E-22 T 14-10-2018 llmg_1390 a3723c6b53ef404300d7537bb01fbc38 870 Gene3D G3DSA:3.90.1720.10 753 869 1.7E-24 T 14-10-2018 llmg_1390 a3723c6b53ef404300d7537bb01fbc38 870 Pfam PF05257 CHAP domain 756 846 1.5E-13 T 14-10-2018 IPR007921 CHAP domain llmg_1390 a3723c6b53ef404300d7537bb01fbc38 870 SUPERFAMILY SSF54001 754 849 1.28E-12 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_1350 99a54d33d21fe21a67dc7a370fab5e1c 191 Pfam PF02342 TerD domain 1 188 4.0E-67 T 14-10-2018 IPR003325 TerD domain llmg_1350 99a54d33d21fe21a67dc7a370fab5e1c 191 Gene3D G3DSA:2.60.60.30 19 185 4.9E-57 T 14-10-2018 llmg_0333 183b52bae785b56383df5087ff4cca61 158 Gene3D G3DSA:3.90.960.10 3 158 1.2E-35 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_0333 183b52bae785b56383df5087ff4cca61 158 PIRSF PIRSF006181 5 158 8.2E-48 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC llmg_0333 183b52bae785b56383df5087ff4cca61 158 SUPERFAMILY SSF55826 7 156 8.37E-35 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_0333 183b52bae785b56383df5087ff4cca61 158 Pfam PF04073 Aminoacyl-tRNA editing domain 41 148 8.5E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 llmg_0786 a409dffc584c1d5450b5fc6d443384d6 132 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 132 30.863 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 llmg_0786 a409dffc584c1d5450b5fc6d443384d6 132 SUPERFAMILY SSF102546 1 131 9.16E-41 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 llmg_0786 a409dffc584c1d5450b5fc6d443384d6 132 Gene3D G3DSA:3.40.1650.10 8 129 2.9E-32 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 llmg_0786 a409dffc584c1d5450b5fc6d443384d6 132 Pfam PF05025 RbsD / FucU transport protein family 1 130 2.1E-42 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 llmg_2216 1f63c67be2c112e55c359437a65b3373 122 Pfam PF01230 HIT domain 10 101 1.7E-22 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2216 1f63c67be2c112e55c359437a65b3373 122 PRINTS PR00332 Histidine triad family signature 87 97 1.8E-6 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2216 1f63c67be2c112e55c359437a65b3373 122 PRINTS PR00332 Histidine triad family signature 20 38 1.8E-6 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2216 1f63c67be2c112e55c359437a65b3373 122 Gene3D G3DSA:3.30.428.10 1 121 4.3E-37 T 14-10-2018 IPR036265 HIT-like superfamily llmg_2216 1f63c67be2c112e55c359437a65b3373 122 SUPERFAMILY SSF54197 1 112 1.01E-35 T 14-10-2018 IPR036265 HIT-like superfamily llmg_1915 3bdfaae32787e4455ab9f53ca99f1cd5 256 Pfam PF02754 Cysteine-rich domain 133 216 6.2E-13 T 14-10-2018 IPR004017 Cysteine-rich domain llmg_1915 3bdfaae32787e4455ab9f53ca99f1cd5 256 Pfam PF02754 Cysteine-rich domain 3 83 6.3E-13 T 14-10-2018 IPR004017 Cysteine-rich domain llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 SUPERFAMILY SSF53383 8 415 1.05E-172 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 415 50.719 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 222 238 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 Gene3D G3DSA:3.90.1150.10 10 397 6.6E-178 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 Gene3D G3DSA:3.40.640.10 37 288 6.6E-178 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 Pfam PF00464 Serine hydroxymethyltransferase 9 386 5.0E-168 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 llmg_0563 e5d926e558efb37729bfeb17fe6fad30 415 PIRSF PIRSF000412 1 414 9.2E-163 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 343 415 1.1E-23 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Gene3D G3DSA:1.20.970.10 3 69 1.9E-29 T 14-10-2018 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Gene3D G3DSA:3.90.1170.30 329 418 2.3E-136 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 SUPERFAMILY SSF54680 331 426 8.89E-26 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 PIRSF PIRSF000478 2 430 5.7E-161 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Pfam PF00591 Glycosyl transferase family, a/b domain 80 301 6.8E-37 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 68 2.6E-23 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 SUPERFAMILY SSF52418 72 324 1.31E-85 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 SUPERFAMILY SSF47648 3 69 2.09E-23 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 Gene3D G3DSA:3.40.1030.10 79 328 2.3E-136 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 112 127 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 408 3.7E-171 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1060 03bee1214fa0a76b2b515752e93d9dfa 430 SMART SM00941 343 416 1.1E-26 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 SUPERFAMILY SSF52540 330 568 2.15E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 Pfam PF00005 ABC transporter 353 498 1.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 12 529 9.6E-134 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 Gene3D G3DSA:3.40.50.300 323 570 2.7E-69 T 14-10-2018 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 SUPERFAMILY SSF90123 13 484 7.85E-32 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 Pfam PF00664 ABC transporter transmembrane region 25 247 1.0E-7 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 Gene3D G3DSA:1.20.1560.10 12 322 1.4E-18 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1861 13b96d6d3b373b6a7a750f9b100bf7c3 573 SMART SM00382 361 545 9.7E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1849 b451d06f9fd7e31e9bc5ed38c4f9feeb 369 Gene3D G3DSA:3.20.20.210 4 369 7.2E-109 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_1849 b451d06f9fd7e31e9bc5ed38c4f9feeb 369 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 13 347 1.2E-11 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 llmg_1849 b451d06f9fd7e31e9bc5ed38c4f9feeb 369 SUPERFAMILY SSF51726 11 369 6.02E-74 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 llmg_0666 8cd1d9fc91a5830c80cd573582f1a93d 418 SUPERFAMILY SSF103473 7 407 6.54E-53 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0666 8cd1d9fc91a5830c80cd573582f1a93d 418 Gene3D G3DSA:1.20.1250.20 2 408 1.3E-49 T 14-10-2018 llmg_0666 8cd1d9fc91a5830c80cd573582f1a93d 418 Pfam PF07690 Major Facilitator Superfamily 21 369 1.7E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_2080 3ff39228908c75d69f6a69262f156933 258 SMART SM00331 2 244 9.1E-63 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 llmg_2080 3ff39228908c75d69f6a69262f156933 258 SUPERFAMILY SSF81606 2 245 9.68E-62 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 llmg_2080 3ff39228908c75d69f6a69262f156933 258 SMART SM00332 1 242 2.5E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 llmg_2080 3ff39228908c75d69f6a69262f156933 258 Gene3D G3DSA:3.60.40.10 1 248 2.1E-69 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 llmg_2080 3ff39228908c75d69f6a69262f156933 258 Pfam PF13672 Protein phosphatase 2C 12 205 3.7E-19 T 14-10-2018 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 SMART SM00387 410 517 2.0E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 SMART SM00388 303 369 6.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 Gene3D G3DSA:1.10.287.130 298 370 1.2E-20 T 14-10-2018 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 SUPERFAMILY SSF55874 376 517 4.45E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 Gene3D G3DSA:3.30.565.10 371 517 1.3E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 465 475 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 517 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 461 5.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 412 517 1.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 SUPERFAMILY SSF47384 294 367 2.75E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_1067 f2f554a4d0cec976a1b0850f192e1a61 517 Pfam PF00512 His Kinase A (phospho-acceptor) domain 305 367 1.9E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 73 91 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 94 110 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 157 166 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 48 59 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 126 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 129 142 7.1E-41 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 16 108 1.7E-38 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 Gene3D G3DSA:3.90.226.10 1 264 7.8E-88 T 14-10-2018 llmg_1777 4a72827715816bb65343e573a98e4f9c 264 SUPERFAMILY SSF52096 6 263 1.27E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily llmg_1777 4a72827715816bb65343e573a98e4f9c 264 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 18 264 3.5E-100 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1346 a95f4308f913e85782a9a7d0d8bc4a1d 197 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 40.609 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 llmg_1346 a95f4308f913e85782a9a7d0d8bc4a1d 197 SUPERFAMILY SSF53271 1 190 1.26E-45 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_1346 a95f4308f913e85782a9a7d0d8bc4a1d 197 Gene3D G3DSA:3.40.50.2020 3 188 1.2E-51 T 14-10-2018 llmg_1346 a95f4308f913e85782a9a7d0d8bc4a1d 197 Pfam PF00156 Phosphoribosyl transferase domain 37 157 1.9E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_1346 a95f4308f913e85782a9a7d0d8bc4a1d 197 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 189 1.4E-75 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 Gene3D G3DSA:1.10.10.2730 132 178 1.1E-16 T 14-10-2018 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 PIRSF PIRSF000408 1 182 5.4E-82 T 14-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 Pfam PF02805 Metal binding domain of Ada 7 69 8.5E-29 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 146 161 7.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 161 177 7.5E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 Gene3D G3DSA:3.40.10.10 4 71 2.4E-28 T 14-10-2018 IPR035451 Ada-like domain superfamily llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 131 173 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 Pfam PF12833 Helix-turn-helix domain 103 178 7.7E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 Gene3D G3DSA:1.10.10.60 76 131 5.2E-9 T 14-10-2018 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 SUPERFAMILY SSF46689 77 125 1.3E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 SUPERFAMILY SSF57884 4 80 6.41E-29 T 14-10-2018 IPR035451 Ada-like domain superfamily llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 SMART SM00342 94 177 9.6E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_0499 d4d0e4ac2a65c3a1d7b7deda641ceb5c 182 SUPERFAMILY SSF46689 130 180 3.36E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0453 ec5cf2acc6e2ff1fa42bf6a0c446f9db 161 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 76 88 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_0453 ec5cf2acc6e2ff1fa42bf6a0c446f9db 161 SUPERFAMILY SSF51261 7 153 1.69E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_0453 ec5cf2acc6e2ff1fa42bf6a0c446f9db 161 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 16 134 4.5E-38 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_0453 ec5cf2acc6e2ff1fa42bf6a0c446f9db 161 Gene3D G3DSA:2.70.70.10 4 155 1.2E-48 T 14-10-2018 IPR011055 Duplicated hybrid motif llmg_0453 ec5cf2acc6e2ff1fa42bf6a0c446f9db 161 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 15 137 1.3E-44 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 Gene3D G3DSA:3.30.428.10 1 132 5.7E-48 T 14-10-2018 IPR036265 HIT-like superfamily llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 Pfam PF01230 HIT domain 12 107 1.1E-28 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 PRINTS PR00332 Histidine triad family signature 26 44 1.5E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 PRINTS PR00332 Histidine triad family signature 5 21 1.5E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 PRINTS PR00332 Histidine triad family signature 93 103 1.5E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein llmg_2273 8f20f9ebb1531d880c0326fc01b34141 132 SUPERFAMILY SSF54197 2 125 4.02E-43 T 14-10-2018 IPR036265 HIT-like superfamily llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 Gene3D G3DSA:3.30.1440.10 1 180 7.8E-81 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 ProSitePatterns PS00358 Ribosomal protein L5 signature. 58 74 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 Pfam PF00281 Ribosomal protein L5 26 81 9.2E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 SUPERFAMILY SSF55282 4 179 1.48E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 PIRSF PIRSF002161 1 180 4.6E-67 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 44.167 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2371 b30ead30fbd50d662d65aec431cbed0f 180 Pfam PF00673 ribosomal L5P family C-terminus 85 178 2.7E-40 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1932 078cb47f9aa6be117848502e525dea76 259 Gene3D G3DSA:3.40.50.300 1 245 5.8E-64 T 14-10-2018 llmg_1932 078cb47f9aa6be117848502e525dea76 259 Pfam PF00005 ABC transporter 26 173 1.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1932 078cb47f9aa6be117848502e525dea76 259 SUPERFAMILY SSF52540 2 226 2.96E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1932 078cb47f9aa6be117848502e525dea76 259 SMART SM00382 33 220 3.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1932 078cb47f9aa6be117848502e525dea76 259 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0987 808aa927d143ff11b0559be83c98af1a 340 SUPERFAMILY SSF56042 173 337 2.84E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_0987 808aa927d143ff11b0559be83c98af1a 340 Pfam PF00586 AIR synthase related protein, N-terminal domain 63 163 4.6E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain llmg_0987 808aa927d143ff11b0559be83c98af1a 340 SUPERFAMILY SSF55326 7 170 8.97E-47 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0987 808aa927d143ff11b0559be83c98af1a 340 Gene3D G3DSA:3.90.650.10 172 337 1.6E-61 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_0987 808aa927d143ff11b0559be83c98af1a 340 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 329 9.9E-132 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0987 808aa927d143ff11b0559be83c98af1a 340 Gene3D G3DSA:3.30.1330.10 5 170 6.8E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0987 808aa927d143ff11b0559be83c98af1a 340 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 6 339 45.927 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0987 808aa927d143ff11b0559be83c98af1a 340 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 334 5.8E-35 T 14-10-2018 IPR010918 PurM-like, C-terminal domain llmg_1967 bb0b6a869a114e24c8c4bf9fa1b899d1 156 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 13 143 1.5E-9 T 14-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC llmg_2066 7caa84b1d7e062ad70ee41abbd611b04 441 SUPERFAMILY SSF103473 4 437 9.68E-60 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2066 7caa84b1d7e062ad70ee41abbd611b04 441 Gene3D G3DSA:1.20.1720.10 10 243 3.7E-43 T 14-10-2018 llmg_2066 7caa84b1d7e062ad70ee41abbd611b04 441 Pfam PF07690 Major Facilitator Superfamily 258 439 1.2E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_2066 7caa84b1d7e062ad70ee41abbd611b04 441 Pfam PF07690 Major Facilitator Superfamily 14 245 2.1E-35 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_2066 7caa84b1d7e062ad70ee41abbd611b04 441 Gene3D G3DSA:1.20.1250.20 246 441 8.8E-19 T 14-10-2018 llmg_1160 1ffa44b50b9799ffa7d65ed842f3e62d 336 Pfam PF13020 Domain of unknown function (DUF3883) 218 307 2.9E-18 T 14-10-2018 IPR024975 Domain of unknown function DUF3883 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.2E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.744 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 Gene3D G3DSA:1.10.720.90 2 55 2.6E-22 T 14-10-2018 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 Pfam PF00453 Ribosomal protein L20 3 109 5.2E-47 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 8.1E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 8.1E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 8.1E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 Gene3D G3DSA:1.10.1900.20 56 119 9.6E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 2.0E-12 T 14-10-2018 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2029 3ca57f1c1eb0bb0d7abd1120c1451844 119 SUPERFAMILY SSF74731 3 117 7.33E-48 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1827 72f4003c5a17c1002f82171f00dc9fea 193 Pfam PF13302 Acetyltransferase (GNAT) domain 17 152 2.1E-28 T 14-10-2018 IPR000182 GNAT domain llmg_1827 72f4003c5a17c1002f82171f00dc9fea 193 SUPERFAMILY SSF55729 10 174 1.61E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1827 72f4003c5a17c1002f82171f00dc9fea 193 Gene3D G3DSA:3.40.630.30 11 189 3.1E-41 T 14-10-2018 llmg_0362 ac56a89b1317faf7135a117cdae29581 550 Gene3D G3DSA:3.40.190.10 44 538 4.2E-147 T 14-10-2018 llmg_0362 ac56a89b1317faf7135a117cdae29581 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 469 8.2E-74 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_0362 ac56a89b1317faf7135a117cdae29581 550 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site llmg_0362 ac56a89b1317faf7135a117cdae29581 550 SUPERFAMILY SSF53850 27 542 2.17E-104 T 14-10-2018 llmg_0362 ac56a89b1317faf7135a117cdae29581 550 Gene3D G3DSA:3.10.105.10 290 522 4.2E-147 T 14-10-2018 llmg_0362 ac56a89b1317faf7135a117cdae29581 550 PIRSF PIRSF002741 1 550 2.1E-85 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_0362 ac56a89b1317faf7135a117cdae29581 550 Gene3D G3DSA:3.90.76.10 63 185 4.2E-147 T 14-10-2018 llmg_0808 66c6be5f560d6968ba2664f2ea80b30d 294 Gene3D G3DSA:3.40.50.300 97 279 4.3E-37 T 14-10-2018 llmg_0808 66c6be5f560d6968ba2664f2ea80b30d 294 SUPERFAMILY SSF52540 127 273 2.53E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0808 66c6be5f560d6968ba2664f2ea80b30d 294 Pfam PF01695 IstB-like ATP binding protein 143 270 8.9E-14 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_0808 66c6be5f560d6968ba2664f2ea80b30d 294 SMART SM00382 143 275 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1165 266e8138793634ed4c2cfb8fe3cb27ad 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 271 1.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1165 266e8138793634ed4c2cfb8fe3cb27ad 284 SUPERFAMILY SSF161098 10 284 2.09E-54 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1165 266e8138793634ed4c2cfb8fe3cb27ad 284 Gene3D G3DSA:1.10.3720.10 6 274 3.8E-48 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Gene3D G3DSA:3.40.50.300 296 508 3.7E-53 T 14-10-2018 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Gene3D G3DSA:3.90.640.50 64 143 1.6E-45 T 14-10-2018 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Gene3D G3DSA:3.40.50.300 510 790 2.7E-55 T 14-10-2018 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 47 234 5.1E-24 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Gene3D G3DSA:3.90.1570.50 36 284 1.6E-45 T 14-10-2018 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 Pfam PF04851 Type III restriction enzyme, res subunit 295 481 5.5E-39 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 SMART SM00487 293 511 2.9E-19 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 39 782 1.1E-94 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 SUPERFAMILY SSF52540 316 791 5.76E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0658 436de5a5d4cf2c841bc6e0b3720f0db5 1058 SUPERFAMILY SSF52540 257 483 7.05E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 Pfam PF01380 SIS domain 107 217 7.5E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 SUPERFAMILY SSF53697 93 229 4.31E-27 T 14-10-2018 llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 SUPERFAMILY SSF46689 9 69 2.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 Gene3D G3DSA:3.40.50.10490 88 242 2.7E-25 T 14-10-2018 llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 66 4.6E-9 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_0439 92e95cd58a8a7c924179a7c8378249d0 242 Gene3D G3DSA:1.10.10.10 6 72 3.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 33 122 3.0E-7 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 Pfam PF00589 Phage integrase family 182 344 6.7E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 Gene3D G3DSA:1.10.150.130 11 150 2.9E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 SUPERFAMILY SSF56349 184 353 9.12E-34 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 Hamap MF_01816 Tyrosine recombinase XerS [xerS]. 1 356 52.256 T 14-10-2018 IPR023670 Tyrosine recombinase XerS GO:0006310|GO:0007059|GO:0015074|GO:0051301 llmg_1270 e40133ea8918220b3117ecb7cfcb3b8d 356 Gene3D G3DSA:1.10.443.10 173 356 1.3E-38 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_0513 09974185f11c9c39c25f482c3f7ff522 174 PIRSF PIRSF021290 1 173 4.7E-67 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 llmg_0513 09974185f11c9c39c25f482c3f7ff522 174 Pfam PF06908 Protein of unknown function (DUF1273) 4 165 1.2E-60 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 llmg_0513 09974185f11c9c39c25f482c3f7ff522 174 Hamap MF_01575 UPF0398 protein . 1 171 34.65 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 llmg_0513 09974185f11c9c39c25f482c3f7ff522 174 Gene3D G3DSA:3.40.50.450 1 173 6.9E-50 T 14-10-2018 llmg_0513 09974185f11c9c39c25f482c3f7ff522 174 SUPERFAMILY SSF102405 1 171 4.94E-53 T 14-10-2018 llmg_0760 66dc5a89d17b2682b680fb5e2f7b0e13 199 SUPERFAMILY SSF53955 137 192 6.22E-6 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_0760 66dc5a89d17b2682b680fb5e2f7b0e13 199 Pfam PF08230 CW_7 repeat 33 72 7.2E-17 T 14-10-2018 IPR013168 Cpl-7 lysozyme, C-terminal llmg_0760 66dc5a89d17b2682b680fb5e2f7b0e13 199 SMART SM01095 32 73 2.1E-22 T 14-10-2018 IPR013168 Cpl-7 lysozyme, C-terminal llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 Pfam PF03952 Enolase, N-terminal domain 4 134 3.1E-61 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 Hamap MF_00318 Enolase [eno]. 2 416 44.475 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 SUPERFAMILY SSF51604 138 431 6.79E-125 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 Gene3D G3DSA:3.30.390.10 1 127 3.9E-58 T 14-10-2018 IPR029017 Enolase-like, N-terminal llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 SUPERFAMILY SSF54826 3 138 4.42E-58 T 14-10-2018 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 37 51 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 316 327 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 339 353 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 107 123 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 161 174 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PRINTS PR00148 Enolase signature 368 385 1.8E-45 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 PIRSF PIRSF001400 1 430 4.3E-187 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 ProSitePatterns PS00164 Enolase signature. 339 352 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 Gene3D G3DSA:3.20.20.120 129 433 1.2E-134 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 SMART SM01192 139 430 2.0E-210 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 SMART SM01193 4 134 3.7E-95 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 430 2.8E-203 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0617 a30af87e9e795bc68a59b42e3377556e 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 428 5.0E-128 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Gene3D G3DSA:3.30.1330.10 49 197 1.6E-130 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 449 566 1.0E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 2.2E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 739 313.816 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 SUPERFAMILY SSF55326 405 574 6.41E-55 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 PIRSF PIRSF001587 4 739 5.4E-301 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 358 1.6E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Pfam PF02769 AIR synthase related protein, C-terminal domain 579 713 4.2E-19 T 14-10-2018 IPR010918 PurM-like, C-terminal domain llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 SUPERFAMILY SSF56042 204 434 1.27E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Gene3D G3DSA:3.30.1330.10 394 570 1.7E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 21 737 2.6E-284 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 SUPERFAMILY SSF55326 19 202 7.78E-50 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 SUPERFAMILY SSF56042 575 738 9.72E-39 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Gene3D G3DSA:3.90.650.10 573 739 1.1E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_0976 39e58f1c9e6dcc61b08c1c2682e3c25b 739 Gene3D G3DSA:3.90.650.10 36 364 1.6E-130 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 Gene3D G3DSA:1.10.10.10 126 223 1.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 Pfam PF00072 Response regulator receiver domain 4 111 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 SUPERFAMILY SSF52172 1 124 6.83E-31 T 14-10-2018 IPR011006 CheY-like superfamily llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 6.5E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 Gene3D G3DSA:3.40.50.2300 1 125 1.1E-28 T 14-10-2018 llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 SMART SM00862 147 222 1.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 SUPERFAMILY SSF46894 127 222 9.35E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 llmg_1929 dbda46c4323a342439beeb3b2f57a33e 223 SMART SM00448 2 111 5.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0784 2b01b8425141c3f43459890178febdc3 327 Pfam PF13377 Periplasmic binding protein-like domain 166 320 3.0E-22 T 14-10-2018 llmg_0784 2b01b8425141c3f43459890178febdc3 327 SMART SM00354 1 71 4.4E-31 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0784 2b01b8425141c3f43459890178febdc3 327 SUPERFAMILY SSF47413 1 57 6.66E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0784 2b01b8425141c3f43459890178febdc3 327 Gene3D G3DSA:3.40.50.2300 154 281 1.4E-58 T 14-10-2018 llmg_0784 2b01b8425141c3f43459890178febdc3 327 SUPERFAMILY SSF53822 61 322 9.24E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0784 2b01b8425141c3f43459890178febdc3 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0784 2b01b8425141c3f43459890178febdc3 327 Gene3D G3DSA:1.10.260.40 3 59 6.9E-20 T 14-10-2018 llmg_0784 2b01b8425141c3f43459890178febdc3 327 Gene3D G3DSA:3.40.50.2300 62 298 1.4E-58 T 14-10-2018 llmg_1352 9a8754fa4009bc2af0a6d16edf5b1ca4 207 Pfam PF02342 TerD domain 1 50 9.7E-15 T 14-10-2018 IPR003325 TerD domain llmg_1352 9a8754fa4009bc2af0a6d16edf5b1ca4 207 Pfam PF02342 TerD domain 75 207 4.6E-40 T 14-10-2018 IPR003325 TerD domain llmg_1352 9a8754fa4009bc2af0a6d16edf5b1ca4 207 Gene3D G3DSA:2.60.60.30 20 199 3.9E-47 T 14-10-2018 llmg_2280 59e1b07a13e7b57d6fa771d3af3da8ee 69 Pfam PF06855 YozE SAM-like fold 2 68 1.7E-23 T 14-10-2018 IPR023089 YozE SAM-like domain llmg_2280 59e1b07a13e7b57d6fa771d3af3da8ee 69 Gene3D G3DSA:1.10.150.260 1 69 1.5E-23 T 14-10-2018 IPR036806 YozE SAM-like superfamily llmg_2280 59e1b07a13e7b57d6fa771d3af3da8ee 69 SUPERFAMILY SSF140652 2 68 9.29E-25 T 14-10-2018 IPR036806 YozE SAM-like superfamily llmg_2280 59e1b07a13e7b57d6fa771d3af3da8ee 69 PIRSF PIRSF037262 1 69 9.3E-31 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 llmg_2280 59e1b07a13e7b57d6fa771d3af3da8ee 69 Hamap MF_01538 UPF0346 protein . 1 69 21.36 T 14-10-2018 IPR010673 Protein of unknown function UPF0346 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 Gene3D G3DSA:3.20.20.80 1 478 8.4E-146 T 14-10-2018 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 Pfam PF00232 Glycosyl hydrolase family 1 2 475 1.2E-133 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 SUPERFAMILY SSF51445 2 471 1.95E-156 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 9.9E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 9.9E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 9.9E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 9.9E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1046 f61e1b5337e7f833146fd35d8780205d 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 9.9E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 2.4E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.4E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.4E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.4E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.4E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 Pfam PF01165 Ribosomal protein S21 6 56 4.8E-22 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 Gene3D G3DSA:1.20.5.1150 16 54 2.7E-20 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.893 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0251 2cb285eac18e5592c1de935f9e43811b 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 3.0E-9 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0378 ee498036378f0bd664e422546f112fe3 107 Hamap MF_01126 UPF0298 protein . 17 94 19.699 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 llmg_0378 ee498036378f0bd664e422546f112fe3 107 PIRSF PIRSF031653 15 107 5.5E-30 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 llmg_0378 ee498036378f0bd664e422546f112fe3 107 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 21 90 2.4E-24 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 314 1.7E-129 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 Pfam PF09190 DALR domain 345 394 5.6E-10 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 448 38.161 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 SUPERFAMILY SSF52374 2 316 3.49E-98 T 14-10-2018 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 Gene3D G3DSA:1.20.120.640 307 448 2.1E-30 T 14-10-2018 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 SUPERFAMILY SSF47323 320 447 9.94E-29 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 447 4.9E-166 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 Gene3D G3DSA:3.40.50.620 1 306 1.3E-130 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 SMART SM00840 344 399 7.2E-9 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 223 244 2.4E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 2.4E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 192 210 2.4E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 llmg_2040 a353c8863a4f4b89dd17e9bf3a782385 448 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 2.4E-28 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 llmg_0020 0ec611f878aea1b9e6609c82b76ab3cc 183 Gene3D G3DSA:3.40.50.2020 1 182 1.4E-62 T 14-10-2018 llmg_0020 0ec611f878aea1b9e6609c82b76ab3cc 183 SUPERFAMILY SSF53271 9 182 6.69E-56 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0020 0ec611f878aea1b9e6609c82b76ab3cc 183 Pfam PF00156 Phosphoribosyl transferase domain 18 163 4.9E-29 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0020 0ec611f878aea1b9e6609c82b76ab3cc 183 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 14 177 3.1E-61 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 Gene3D G3DSA:3.90.180.10 20 326 9.3E-97 T 14-10-2018 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 85 5.1E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 Gene3D G3DSA:3.40.50.720 123 268 9.3E-97 T 14-10-2018 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 143 164 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 Pfam PF13602 Zinc-binding dehydrogenase 187 327 1.6E-14 T 14-10-2018 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 10 327 2.3E-109 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 SUPERFAMILY SSF50129 1 139 7.3E-31 T 14-10-2018 IPR011032 GroES-like superfamily llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 SMART SM00829 5 327 5.8E-10 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 llmg_1850 62fa1c0e0ce9f96fb32dc4a98643ff7a 328 SUPERFAMILY SSF51735 112 293 6.52E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0006 a59b652ed211fb04fe9d262f0bb5354b 185 Gene3D G3DSA:1.10.260.40 1 78 9.1E-18 T 14-10-2018 llmg_0006 a59b652ed211fb04fe9d262f0bb5354b 185 SUPERFAMILY SSF47413 1 62 8.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0006 a59b652ed211fb04fe9d262f0bb5354b 185 SMART SM00530 5 60 3.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0006 a59b652ed211fb04fe9d262f0bb5354b 185 Pfam PF01381 Helix-turn-helix 6 57 5.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2004 058d85964a70a3e328738ee9985952a8 150 Gene3D G3DSA:3.40.630.30 1 145 8.2E-35 T 14-10-2018 llmg_2004 058d85964a70a3e328738ee9985952a8 150 SUPERFAMILY SSF55729 4 144 1.15E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2004 058d85964a70a3e328738ee9985952a8 150 Pfam PF13673 Acetyltransferase (GNAT) domain 37 144 1.0E-17 T 14-10-2018 IPR000182 GNAT domain llmg_1715 8f65308358f68b0f06df8e31cb16f4e8 96 Gene3D G3DSA:1.10.10.60 7 87 1.4E-9 T 14-10-2018 llmg_1715 8f65308358f68b0f06df8e31cb16f4e8 96 SUPERFAMILY SSF46689 1 93 2.33E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1715 8f65308358f68b0f06df8e31cb16f4e8 96 Pfam PF01527 Transposase 2 75 2.9E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1072 8f65308358f68b0f06df8e31cb16f4e8 96 Gene3D G3DSA:1.10.10.60 7 87 1.4E-9 T 14-10-2018 llmg_1072 8f65308358f68b0f06df8e31cb16f4e8 96 SUPERFAMILY SSF46689 1 93 2.33E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1072 8f65308358f68b0f06df8e31cb16f4e8 96 Pfam PF01527 Transposase 2 75 2.9E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0981 8f65308358f68b0f06df8e31cb16f4e8 96 Gene3D G3DSA:1.10.10.60 7 87 1.4E-9 T 14-10-2018 llmg_0981 8f65308358f68b0f06df8e31cb16f4e8 96 SUPERFAMILY SSF46689 1 93 2.33E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0981 8f65308358f68b0f06df8e31cb16f4e8 96 Pfam PF01527 Transposase 2 75 2.9E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0077 e83b66a10282bdd15d7f0c3d5b0d57a0 216 Gene3D G3DSA:1.10.472.50 1 97 1.8E-28 T 14-10-2018 llmg_0077 e83b66a10282bdd15d7f0c3d5b0d57a0 216 Gene3D G3DSA:1.20.58.1910 99 216 2.0E-39 T 14-10-2018 llmg_0077 e83b66a10282bdd15d7f0c3d5b0d57a0 216 SUPERFAMILY SSF109604 2 212 1.37E-59 T 14-10-2018 llmg_0077 e83b66a10282bdd15d7f0c3d5b0d57a0 216 SMART SM00471 19 135 3.8E-8 T 14-10-2018 IPR003607 HD/PDEase domain llmg_0077 e83b66a10282bdd15d7f0c3d5b0d57a0 216 Pfam PF01966 HD domain 24 126 9.0E-9 T 14-10-2018 IPR006674 HD domain llmg_0264 c6454feb0d0fdc131217801af0d5da3a 640 Gene3D G3DSA:3.60.21.10 168 316 6.7E-8 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_0264 c6454feb0d0fdc131217801af0d5da3a 640 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 2 640 37.332 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 llmg_0264 c6454feb0d0fdc131217801af0d5da3a 640 SUPERFAMILY SSF56300 178 554 8.81E-12 T 14-10-2018 llmg_0264 c6454feb0d0fdc131217801af0d5da3a 640 PIRSF PIRSF000906 1 640 0.0 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 llmg_0264 c6454feb0d0fdc131217801af0d5da3a 640 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 638 1.3E-267 T 14-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 llmg_0026 af636a68fefab8a8ea84324b463a380c 107 SUPERFAMILY SSF88659 21 95 7.85E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_0026 af636a68fefab8a8ea84324b463a380c 107 Gene3D G3DSA:1.10.10.10 16 97 2.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0026 af636a68fefab8a8ea84324b463a380c 107 Pfam PF04545 Sigma-70, region 4 43 91 2.1E-6 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 llmg_1431 f621aeded88d40494394d5161646567d 330 Gene3D G3DSA:3.30.2350.10 1 245 4.2E-86 T 14-10-2018 llmg_1431 f621aeded88d40494394d5161646567d 330 SUPERFAMILY SSF55120 5 242 4.32E-72 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1431 f621aeded88d40494394d5161646567d 330 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 6 221 1.1E-73 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1431 f621aeded88d40494394d5161646567d 330 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 329 18.326 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1431 f621aeded88d40494394d5161646567d 330 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 183 1.1E-53 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 llmg_1431 f621aeded88d40494394d5161646567d 330 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 184 242 3.1E-10 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Gene3D G3DSA:1.10.8.60 150 218 1.8E-12 T 14-10-2018 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Gene3D G3DSA:1.20.272.10 222 324 2.5E-40 T 14-10-2018 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 124 4.4E-15 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 SMART SM00382 38 150 1.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Gene3D G3DSA:1.10.3710.10 325 419 2.9E-23 T 14-10-2018 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Pfam PF12002 MgsA AAA+ ATPase C terminal 247 412 1.1E-60 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 SUPERFAMILY SSF48019 232 416 6.8E-67 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 SUPERFAMILY SSF52540 3 224 4.04E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Pfam PF16193 AAA C-terminal domain 173 246 1.6E-22 T 14-10-2018 IPR032423 AAA C-terminal domain llmg_0103 3de441be38ef6ab043f4eac7ad127f1f 419 Gene3D G3DSA:3.40.50.300 1 149 2.5E-39 T 14-10-2018 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 PRINTS PR00502 NUDIX hydrolase family signature 45 59 3.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 PRINTS PR00502 NUDIX hydrolase family signature 59 74 3.6E-5 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 Gene3D G3DSA:3.90.79.10 2 145 7.4E-37 T 14-10-2018 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 SUPERFAMILY SSF55811 10 152 1.0E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_1488 6a7131ebc395fcc54dda0ffa58e9a1c2 162 Pfam PF00293 NUDIX domain 23 137 1.5E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 179 8.9E-75 T 14-10-2018 IPR006340 Protein of unknown function DUF436 llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 SUPERFAMILY SSF110710 4 180 5.23E-76 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 Gene3D G3DSA:3.40.50.10360 3 180 1.0E-74 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 Hamap MF_00800 UPF0340 protein . 1 180 91.491 T 14-10-2018 IPR006340 Protein of unknown function DUF436 llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 15 179 1.0E-86 T 14-10-2018 IPR006340 Protein of unknown function DUF436 llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 PIRSF PIRSF007510 1 180 5.8E-86 T 14-10-2018 IPR006340 Protein of unknown function DUF436 llmg_0465 9db0c85891a51b6d499d1c9cd52c9fce 180 Pfam PF04260 Protein of unknown function (DUF436) 10 179 6.2E-71 T 14-10-2018 IPR006340 Protein of unknown function DUF436 llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 SUPERFAMILY SSF55129 1 58 4.06E-19 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 Gene3D G3DSA:3.30.1390.20 1 59 7.5E-24 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 4.3E-27 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 8.1E-17 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 PIRSF PIRSF002211 1 59 1.0E-25 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2363 1f843c165a8dc6429954bfa1a341d10b 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.852 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 Gene3D G3DSA:1.10.1660.10 1 133 9.7E-28 T 14-10-2018 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 Pfam PF13411 MerR HTH family regulatory protein 1 67 1.4E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.3E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 SUPERFAMILY SSF46955 1 120 4.76E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2068 cc457a20dda4bbf31ccdd0c479078447 134 SMART SM00422 1 70 1.5E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Gene3D G3DSA:3.30.70.2110 102 190 3.9E-67 T 14-10-2018 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SMART SM00740 705 765 1.4E-14 T 14-10-2018 IPR005543 PASTA domain llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SMART SM00740 646 704 0.47 T 14-10-2018 IPR005543 PASTA domain llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SUPERFAMILY SSF56601 271 618 8.08E-63 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Gene3D G3DSA:2.20.70.70 79 258 3.9E-67 T 14-10-2018 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SUPERFAMILY SSF54184 649 705 3.79E-12 T 14-10-2018 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SUPERFAMILY SSF54184 709 764 1.57E-14 T 14-10-2018 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 SUPERFAMILY SSF56519 77 269 3.27E-42 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Pfam PF00905 Penicillin binding protein transpeptidase domain 299 625 7.4E-61 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Pfam PF03793 PASTA domain 710 763 5.7E-7 T 14-10-2018 IPR005543 PASTA domain llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Gene3D G3DSA:3.90.1310.10 83 237 3.9E-67 T 14-10-2018 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Pfam PF03717 Penicillin-binding Protein dimerisation domain 81 252 8.4E-23 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 llmg_1679 225f28ca149d34c12f7417fb4910143e 765 Gene3D G3DSA:3.40.710.10 264 640 3.6E-73 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 620 636 4.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 502 520 4.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 680 705 4.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 648 664 4.7E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 Gene3D G3DSA:2.70.150.10 15 241 6.3E-274 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 Pfam PF00702 haloacid dehalogenase-like hydrolase 342 662 1.9E-25 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 Pfam PF00690 Cation transporter/ATPase, N-terminus 4 71 1.7E-16 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 SUPERFAMILY SSF81660 349 557 7.19E-52 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 672 684 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 176 190 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 343 357 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 567 577 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 648 667 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 556 5.8E-36 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 SUPERFAMILY SSF81653 128 238 6.67E-24 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 SUPERFAMILY SSF56784 341 760 3.16E-54 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0643 7a425b05863a147292232c064e545b68 918 SUPERFAMILY SSF81665 2 913 3.01E-100 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 Gene3D G3DSA:1.20.1110.10 54 901 6.3E-274 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 Pfam PF00689 Cation transporting ATPase, C-terminus 743 910 1.6E-36 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 345 351 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 Pfam PF00122 E1-E2 ATPase 126 323 3.8E-43 T 14-10-2018 llmg_0643 7a425b05863a147292232c064e545b68 918 Gene3D G3DSA:3.40.50.1000 340 693 6.3E-274 T 14-10-2018 IPR023214 HAD superfamily llmg_0643 7a425b05863a147292232c064e545b68 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 618 728 1.5E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 225 400 1.2E-23 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 440 592 7.2E-20 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 Gene3D G3DSA:3.40.1110.10 353 552 6.3E-274 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0643 7a425b05863a147292232c064e545b68 918 SMART SM00831 2 76 5.1E-17 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_0725 b7d926084336919a448fc176e6e31b06 231 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 199 2.4E-32 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 6 297 4.1E-84 T 14-10-2018 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 PIRSF PIRSF015950 1 318 2.1E-105 T 14-10-2018 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 Pfam PF00288 GHMP kinases N terminal domain 88 145 2.2E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 Gene3D G3DSA:3.30.70.890 177 308 3.5E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 SUPERFAMILY SSF55060 170 303 5.47E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 Pfam PF08544 GHMP kinases C terminal 213 302 3.9E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 SUPERFAMILY SSF54211 3 162 1.52E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_0426 82fe31a7345bd3c7bd2e2bbdd65b12ac 318 Gene3D G3DSA:3.30.230.10 1 175 3.5E-59 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_1534 d5a77372a793372d8621480d32a61b87 824 SUPERFAMILY SSF101904 496 811 3.27E-69 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal llmg_1534 d5a77372a793372d8621480d32a61b87 824 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 3 824 32.607 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Gene3D G3DSA:3.30.1360.40 232 328 1.2E-190 T 14-10-2018 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Gene3D G3DSA:3.90.199.10 28 481 1.2E-190 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 llmg_1534 d5a77372a793372d8621480d32a61b87 824 SMART SM00434 7 460 1.1E-248 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Gene3D G3DSA:2.120.10.90 497 823 1.3E-67 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 28 467 1.2E-146 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Gene3D G3DSA:1.10.268.10 365 453 1.2E-190 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 706 750 1.7E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 700 7.7E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 603 650 0.13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 546 597 8.5E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 501 519 4.0 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 llmg_1534 d5a77372a793372d8621480d32a61b87 824 SUPERFAMILY SSF56719 27 482 2.75E-163 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1534 d5a77372a793372d8621480d32a61b87 824 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 4 740 0.0 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 Gene3D G3DSA:2.40.280.10 2 129 1.4E-48 T 14-10-2018 IPR023620 Small protein B llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 133 1.0E-66 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 SUPERFAMILY SSF74982 4 133 2.35E-49 T 14-10-2018 IPR023620 Small protein B llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 69.21 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 Pfam PF01668 SmpB protein 11 151 1.5E-58 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 llmg_1902 6a1cacb4ec03d1c58cee96abe171e78e 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 2.7E-56 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PIRSF PIRSF000097 1 112 1.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PIRSF PIRSF000097 110 270 5.8E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PRINTS PR00069 Aldo-keto reductase signature 156 185 2.1E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PRINTS PR00069 Aldo-keto reductase signature 31 55 2.1E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PRINTS PR00069 Aldo-keto reductase signature 122 139 2.1E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PRINTS PR00069 Aldo-keto reductase signature 193 217 2.1E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 PRINTS PR00069 Aldo-keto reductase signature 91 109 2.1E-49 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 SUPERFAMILY SSF51430 2 264 7.2E-90 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 Pfam PF00248 Aldo/keto reductase family 17 258 7.6E-49 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain llmg_0352 f976d143fe905fda02b7bde22f5fd676 272 Gene3D G3DSA:3.20.20.100 1 272 8.3E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_1222 65c8c9cd669da13c6d3fac5882a52607 428 Pfam PF04914 DltD protein 46 398 1.4E-112 T 14-10-2018 IPR006998 DltD llmg_1222 65c8c9cd669da13c6d3fac5882a52607 428 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 9 397 7.4E-129 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes llmg_1222 65c8c9cd669da13c6d3fac5882a52607 428 PIRSF PIRSF021438 1 400 3.5E-156 T 14-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes llmg_2089 b299b937d04fb1b2257d03d3e05e81d9 1715 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 307 481 4.8E-21 T 14-10-2018 IPR010090 Phage tail tape measure protein llmg_2089 b299b937d04fb1b2257d03d3e05e81d9 1715 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 503 684 1.6E-13 T 14-10-2018 IPR010090 Phage tail tape measure protein llmg_2089 b299b937d04fb1b2257d03d3e05e81d9 1715 Pfam PF10145 Phage-related minor tail protein 328 541 4.8E-26 T 14-10-2018 IPR010090 Phage tail tape measure protein llmg_2089 b299b937d04fb1b2257d03d3e05e81d9 1715 SUPERFAMILY SSF53955 1484 1581 1.39E-6 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_2387 549601c5a10be893eebc4b9060723dea 496 TIGRFAM TIGR00260 thrC: threonine synthase 79 434 2.3E-72 T 14-10-2018 IPR004450 Threonine synthase-like llmg_2387 549601c5a10be893eebc4b9060723dea 496 Gene3D G3DSA:3.40.50.1100 108 230 9.0E-128 T 14-10-2018 llmg_2387 549601c5a10be893eebc4b9060723dea 496 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 420 9.3E-15 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme llmg_2387 549601c5a10be893eebc4b9060723dea 496 Gene3D G3DSA:3.40.50.1100 98 445 9.0E-128 T 14-10-2018 llmg_2387 549601c5a10be893eebc4b9060723dea 496 Pfam PF14821 Threonine synthase N terminus 5 80 4.5E-22 T 14-10-2018 IPR029144 Threonine synthase, N-terminal llmg_2387 549601c5a10be893eebc4b9060723dea 496 SUPERFAMILY SSF53686 3 493 5.91E-143 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme llmg_2387 549601c5a10be893eebc4b9060723dea 496 Gene3D G3DSA:3.90.1380.10 2 86 1.1E-20 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily llmg_1317 ed6cc0ae291e0887d5205ba7a898e00d 234 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 229 39.615 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 llmg_1317 ed6cc0ae291e0887d5205ba7a898e00d 234 SUPERFAMILY SSF51366 8 228 1.73E-54 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_1317 ed6cc0ae291e0887d5205ba7a898e00d 234 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 34 229 1.1E-86 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 llmg_1317 ed6cc0ae291e0887d5205ba7a898e00d 234 Gene3D G3DSA:3.20.20.70 1 230 3.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 Pfam PF00390 Malic enzyme, N-terminal domain 68 249 8.2E-67 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 Gene3D G3DSA:3.40.50.10380 1 256 4.5E-92 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 SUPERFAMILY SSF53223 2 258 1.51E-94 T 14-10-2018 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 Gene3D G3DSA:3.40.50.720 257 540 6.4E-96 T 14-10-2018 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 SUPERFAMILY SSF51735 259 540 1.09E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PIRSF PIRSF000106 1 540 9.0E-204 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 Pfam PF03949 Malic enzyme, NAD binding domain 259 514 5.4E-98 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 SMART SM01274 67 249 1.2E-80 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 SMART SM00919 259 515 1.4E-106 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 ProSitePatterns PS00331 Malic enzymes signature. 255 271 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 286 302 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 135 164 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 255 271 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 230 248 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 171 193 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 393 409 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_1638 0cc4bf0e21cd673950fde32335db1509 540 PRINTS PR00072 Malic enzyme signature 73 97 2.9E-62 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00102 Ornithine carbamoyltransferase signature 320 331 2.2E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00102 Ornithine carbamoyltransferase signature 61 75 2.2E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00102 Ornithine carbamoyltransferase signature 94 107 2.2E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00102 Ornithine carbamoyltransferase signature 238 248 2.2E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00102 Ornithine carbamoyltransferase signature 134 148 2.2E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 18 158 1.0E-41 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 Gene3D G3DSA:3.40.50.1370 16 338 2.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 SUPERFAMILY SSF53671 15 343 1.44E-93 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 1.4E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 286 1.4E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 306 329 1.4E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 63 82 1.4E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 Gene3D G3DSA:3.40.50.1370 161 328 2.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 164 339 1.8E-53 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 18 341 9.3E-114 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 63 70 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_2312 4d849071639ca14acc31aab81ed040a9 354 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 17 342 76.504 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 llmg_1579 7cf37b6fe24c6547cbbb6a95e66affb2 231 Gene3D G3DSA:3.40.50.1240 1 229 3.1E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_1579 7cf37b6fe24c6547cbbb6a95e66affb2 231 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 217 1.8E-32 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_1579 7cf37b6fe24c6547cbbb6a95e66affb2 231 SUPERFAMILY SSF53254 1 225 3.14E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_1579 7cf37b6fe24c6547cbbb6a95e66affb2 231 SMART SM00855 3 181 7.0E-19 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_1579 7cf37b6fe24c6547cbbb6a95e66affb2 231 PIRSF PIRSF000709 2 99 1.1E-5 T 14-10-2018 llmg_0520 3063d308366666f75e04f8e2240af974 637 SUPERFAMILY SSF57783 3 97 4.08E-34 T 14-10-2018 llmg_0520 3063d308366666f75e04f8e2240af974 637 PIRSF PIRSF002811 1 637 5.6E-209 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 llmg_0520 3063d308366666f75e04f8e2240af974 637 SUPERFAMILY SSF56731 112 420 5.62E-88 T 14-10-2018 llmg_0520 3063d308366666f75e04f8e2240af974 637 SMART SM00493 257 328 4.0E-19 T 14-10-2018 IPR006171 TOPRIM domain llmg_0520 3063d308366666f75e04f8e2240af974 637 TIGRFAM TIGR01391 dnaG: DNA primase 4 410 2.2E-145 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 llmg_0520 3063d308366666f75e04f8e2240af974 637 SMART SM00400 35 89 4.9E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 llmg_0520 3063d308366666f75e04f8e2240af974 637 Pfam PF13155 Toprim-like 260 342 4.0E-17 T 14-10-2018 llmg_0520 3063d308366666f75e04f8e2240af974 637 Gene3D G3DSA:3.90.580.10 2 101 4.7E-37 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 llmg_0520 3063d308366666f75e04f8e2240af974 637 Pfam PF01807 CHC2 zinc finger 6 99 1.5E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 llmg_0520 3063d308366666f75e04f8e2240af974 637 Hamap MF_00974 DNA primase [dnaG]. 3 628 27.504 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 llmg_0520 3063d308366666f75e04f8e2240af974 637 Gene3D G3DSA:3.90.980.10 105 238 7.2E-35 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily llmg_0520 3063d308366666f75e04f8e2240af974 637 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 250 7.4E-37 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal llmg_0520 3063d308366666f75e04f8e2240af974 637 Gene3D G3DSA:3.40.1360.10 239 359 7.9E-36 T 14-10-2018 llmg_0520 3063d308366666f75e04f8e2240af974 637 Gene3D G3DSA:1.10.860.10 497 637 9.1E-22 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 4.5E-70 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 SUPERFAMILY SSF52540 96 370 7.01E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 497 6.8E-248 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Gene3D G3DSA:3.40.50.300 94 371 2.3E-122 T 14-10-2018 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 SUPERFAMILY SSF47917 372 497 3.92E-47 T 14-10-2018 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Gene3D G3DSA:1.20.150.20 372 498 6.1E-50 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Gene3D G3DSA:2.40.30.20 1 93 6.8E-34 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 5.5E-19 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 PIRSF PIRSF039088 1 500 6.7E-242 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 8.9E-47 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 SUPERFAMILY SSF50615 10 94 2.51E-28 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1948 b51111c5122bd6aa63ff2fb6efefd49f 500 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 49.607 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 Gene3D G3DSA:1.20.1090.10 173 356 2.2E-51 T 14-10-2018 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 61.613 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 351 1.2E-114 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 Gene3D G3DSA:3.40.50.1970 1 172 2.1E-62 T 14-10-2018 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 SUPERFAMILY SSF56796 1 355 1.44E-109 T 14-10-2018 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 Pfam PF01761 3-dehydroquinate synthase 67 324 4.7E-98 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 llmg_1938 fa9723584a924bbd299fa2b52eccd2b6 356 PIRSF PIRSF001455 4 355 2.8E-103 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 llmg_1461 282ae3e26893cf79802efec510b9ce04 514 Gene3D G3DSA:3.10.105.10 235 475 1.4E-133 T 14-10-2018 llmg_1461 282ae3e26893cf79802efec510b9ce04 514 Gene3D G3DSA:3.40.190.10 13 494 1.4E-133 T 14-10-2018 llmg_1461 282ae3e26893cf79802efec510b9ce04 514 PIRSF PIRSF002741 10 496 1.1E-62 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_1461 282ae3e26893cf79802efec510b9ce04 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 47 405 1.9E-64 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_1461 282ae3e26893cf79802efec510b9ce04 514 SUPERFAMILY SSF53850 12 491 7.6E-88 T 14-10-2018 llmg_1461 282ae3e26893cf79802efec510b9ce04 514 Gene3D G3DSA:3.90.76.10 34 138 1.4E-133 T 14-10-2018 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 Pfam PF07650 KH domain 208 286 3.2E-22 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 168 8.0E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 Hamap MF_00367 GTPase Era [era]. 6 297 37.659 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 SUPERFAMILY SSF54814 181 298 8.63E-41 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 Gene3D G3DSA:3.40.50.300 3 185 8.5E-51 T 14-10-2018 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 Pfam PF01926 50S ribosome-binding GTPase 11 125 6.6E-26 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 Gene3D G3DSA:3.30.300.20 186 299 1.0E-41 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 7.8E-103 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0371 973b4101a84c21e2db5bbc4f0620341c 303 SUPERFAMILY SSF52540 11 206 3.28E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1869 0e92eddb26794810f1454181620a11c4 600 Gene3D G3DSA:3.20.20.80 124 519 4.8E-118 T 14-10-2018 llmg_1869 0e92eddb26794810f1454181620a11c4 600 SMART SM00642 136 518 3.0E-82 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_1869 0e92eddb26794810f1454181620a11c4 600 Pfam PF00128 Alpha amylase, catalytic domain 186 492 2.9E-63 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_1869 0e92eddb26794810f1454181620a11c4 600 SUPERFAMILY SSF51445 108 516 1.8E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Gene3D G3DSA:1.50.10.10 299 691 4.2E-120 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 710 758 6.2E-9 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Gene3D G3DSA:2.70.98.40 1 255 8.7E-43 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 SUPERFAMILY SSF74650 3 253 4.08E-49 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 304 704 3.3E-144 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 PIRSF PIRSF036289 1 769 9.5E-215 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Gene3D G3DSA:2.60.420.10 692 766 4.7E-14 T 14-10-2018 llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 20 251 3.6E-38 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 llmg_0455 5b26cf1e4a389acbf0d9fb79c39dd952 769 SUPERFAMILY SSF48208 258 742 1.59E-90 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 24.771 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 Gene3D G3DSA:4.10.910.10 72 121 1.4E-24 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 PIRSF PIRSF002134 1 121 3.5E-38 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 SUPERFAMILY SSF46946 2 113 1.32E-40 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.8E-27 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 Gene3D G3DSA:1.10.8.50 1 71 9.7E-24 T 14-10-2018 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.2E-48 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2356 35f33e634e8d42e9368bed1e4942b8b3 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 SUPERFAMILY SSF74650 7 247 5.96E-44 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Gene3D G3DSA:1.50.10.10 303 689 8.2E-134 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 SUPERFAMILY SSF48208 258 756 2.21E-108 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Gene3D G3DSA:2.70.98.40 3 249 5.7E-50 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 308 703 6.2E-125 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 707 758 7.1E-8 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 PIRSF PIRSF036289 2 766 2.6E-204 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 13 245 5.6E-42 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 llmg_0487 6be03d1ebe01f5274d2f67b1420757af 766 Gene3D G3DSA:2.60.420.10 690 766 1.2E-19 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 SUPERFAMILY SSF52833 2 100 8.2E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 210 229 4.6E-37 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 306 324 4.6E-37 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 432 448 4.6E-37 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 458 480 4.6E-37 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 366 4.6E-37 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 Gene3D G3DSA:3.50.50.60 318 440 5.8E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 Gene3D G3DSA:3.50.50.60 208 498 5.8E-103 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 209 231 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 434 455 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 468 486 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 396 412 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 329 341 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 344 368 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 271 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 307 315 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 241 256 2.8E-65 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 2 508 5.5E-234 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 Pfam PF13192 Thioredoxin domain 123 193 2.9E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 208 494 1.5E-46 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 336 356 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 Gene3D G3DSA:3.40.30.80 2 197 3.7E-57 T 14-10-2018 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 SUPERFAMILY SSF52833 103 193 7.65E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 PIRSF PIRSF000238 2 508 1.1E-238 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 llmg_0357 8bfc41ed45843971456aeb50c4ffe5e2 508 SUPERFAMILY SSF51905 203 504 4.73E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1207 515f972629c0915eb4248466fae16c78 171 SUPERFAMILY SSF160369 10 166 1.44E-52 T 14-10-2018 llmg_1207 515f972629c0915eb4248466fae16c78 171 Pfam PF00466 Ribosomal protein L10 10 107 7.7E-27 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 llmg_1207 515f972629c0915eb4248466fae16c78 171 Gene3D G3DSA:3.30.70.1730 10 139 2.5E-40 T 14-10-2018 llmg_1207 515f972629c0915eb4248466fae16c78 171 ProSitePatterns PS01109 Ribosomal protein L10 signature. 14 48 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1207 515f972629c0915eb4248466fae16c78 171 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 9 167 27.59 T 14-10-2018 IPR022973 Ribosomal protein L10 llmg_1207 515f972629c0915eb4248466fae16c78 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 12 150 1.0E-5 T 14-10-2018 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 Gene3D G3DSA:3.30.300.20 17 106 2.7E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 Gene3D G3DSA:3.30.1140.32 107 207 4.8E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 3.8E-39 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.263 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 Pfam PF07650 KH domain 38 109 1.9E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 SUPERFAMILY SSF54821 106 205 9.55E-37 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 SMART SM00322 59 124 1.7E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.8E-90 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 llmg_2377 f1d67805c543c3ee7855d58dcd505c11 217 SUPERFAMILY SSF54814 2 105 4.45E-35 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 llmg_2090 5a7f7d366928124e96ca38b5041a2d49 138 Pfam PF06896 Phage tail assembly chaperone proteins, TAC 1 113 1.7E-37 T 14-10-2018 IPR009681 Phage tail assembly chaperone protein, Siphoviridae llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 Pfam PF07690 Major Facilitator Superfamily 25 412 6.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 3.6E-8 T 14-10-2018 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 362 382 3.6E-8 T 14-10-2018 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 24 48 3.6E-8 T 14-10-2018 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 3.6E-8 T 14-10-2018 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 SUPERFAMILY SSF103473 13 455 1.03E-54 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 Gene3D G3DSA:1.20.1720.10 22 261 2.2E-35 T 14-10-2018 llmg_0967 e9d9cb401bc53c4fb43b815cbffa7340 457 Gene3D G3DSA:1.20.1250.20 262 457 1.8E-17 T 14-10-2018 llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 234 6.0E-33 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 Gene3D G3DSA:3.40.50.1000 3 262 6.7E-82 T 14-10-2018 IPR023214 HAD superfamily llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 261 6.5E-67 T 14-10-2018 llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 261 8.4E-61 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 SUPERFAMILY SSF56784 1 266 3.28E-75 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1497 b2e2e9da4585b3d52c9efc191a8b74eb 271 Gene3D G3DSA:3.30.1240.10 85 190 6.7E-82 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF56059 666 927 2.3E-101 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:3.30.470.20 120 401 8.0E-121 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF48108 395 546 2.09E-51 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:3.40.50.20 1 116 5.8E-48 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:3.40.50.20 547 655 1.4E-45 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 8.6E-35 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.7E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF56059 128 399 6.01E-105 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1062 13.264 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Pfam PF02142 MGS-like domain 950 1042 4.3E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 8.7E-42 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SMART SM00851 949 1042 1.7E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF52440 1 127 6.19E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:3.30.470.20 659 929 1.3E-105 T 14-10-2018 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:3.40.50.1380 931 1063 1.1E-30 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF52335 928 1052 1.44E-25 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Gene3D G3DSA:1.10.1030.10 402 546 1.4E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SMART SM01096 420 540 6.3E-68 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SUPERFAMILY SSF52440 549 668 1.31E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.016 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_1089 e6a92cc3f1e4466de5cc9925ed0ee04d 1064 SMART SM01209 674 837 0.006 T 14-10-2018 llmg_0102 d21e378823d74d055c898561776b3a72 261 Pfam PF08535 KorB domain 118 179 3.1E-5 T 14-10-2018 IPR013741 Repressor KorB domain llmg_0102 d21e378823d74d055c898561776b3a72 261 SMART SM00470 6 96 1.3E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_0102 d21e378823d74d055c898561776b3a72 261 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 2 181 5.8E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 llmg_0102 d21e378823d74d055c898561776b3a72 261 Pfam PF02195 ParB-like nuclease domain 7 95 8.6E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_0102 d21e378823d74d055c898561776b3a72 261 SUPERFAMILY SSF110849 6 98 9.94E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily llmg_0102 d21e378823d74d055c898561776b3a72 261 SUPERFAMILY SSF109709 89 195 5.49E-32 T 14-10-2018 llmg_0102 d21e378823d74d055c898561776b3a72 261 Gene3D G3DSA:1.10.10.2830 83 196 7.9E-34 T 14-10-2018 llmg_0102 d21e378823d74d055c898561776b3a72 261 Gene3D G3DSA:3.90.1530.30 19 81 6.0E-26 T 14-10-2018 llmg_0627 6ec6eeda5270387c29790a919491f06f 507 Gene3D G3DSA:3.40.50.12780 3 416 5.4E-50 T 14-10-2018 llmg_0627 6ec6eeda5270387c29790a919491f06f 507 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 14-10-2018 IPR020845 AMP-binding, conserved site llmg_0627 6ec6eeda5270387c29790a919491f06f 507 Pfam PF00501 AMP-binding enzyme 18 417 5.9E-44 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 llmg_0627 6ec6eeda5270387c29790a919491f06f 507 SUPERFAMILY SSF56801 9 505 8.37E-64 T 14-10-2018 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 SUPERFAMILY SSF54719 97 205 9.04E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 Gene3D G3DSA:1.10.287.990 20 89 1.9E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 Gene3D G3DSA:2.40.500.20 95 206 1.7E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PIRSF PIRSF000349 1 206 4.4E-79 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 88 7.1E-28 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.0E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PRINTS PR01703 Manganese superoxide dismutase signature 129 137 3.0E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 3.0E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 102 200 3.7E-41 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 SUPERFAMILY SSF46609 1 91 1.44E-36 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_0429 5bf1fd2b072281d5a5407211119937bf 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 llmg_1068 71d56310d056617ad4bd472917f8a730 236 SUPERFAMILY SSF46894 137 232 3.68E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 llmg_1068 71d56310d056617ad4bd472917f8a730 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 231 6.7E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1068 71d56310d056617ad4bd472917f8a730 236 SMART SM00862 160 231 8.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_1068 71d56310d056617ad4bd472917f8a730 236 SUPERFAMILY SSF52172 1 126 8.54E-33 T 14-10-2018 IPR011006 CheY-like superfamily llmg_1068 71d56310d056617ad4bd472917f8a730 236 Gene3D G3DSA:3.40.50.2300 1 140 1.3E-32 T 14-10-2018 llmg_1068 71d56310d056617ad4bd472917f8a730 236 Gene3D G3DSA:1.10.10.10 141 236 2.8E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1068 71d56310d056617ad4bd472917f8a730 236 SMART SM00448 2 113 5.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1068 71d56310d056617ad4bd472917f8a730 236 Pfam PF00072 Response regulator receiver domain 4 112 4.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_2025 dd11b1a528f24136708ba014c5242869 294 Gene3D G3DSA:1.10.3720.10 78 289 3.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily llmg_2025 dd11b1a528f24136708ba014c5242869 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 290 1.2E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2025 dd11b1a528f24136708ba014c5242869 294 SUPERFAMILY SSF161098 85 274 8.37E-21 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1028 382dfc51d909b777e05d2f868bfe6e04 212 Gene3D G3DSA:3.40.109.10 2 212 7.6E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1028 382dfc51d909b777e05d2f868bfe6e04 212 SUPERFAMILY SSF55469 9 210 3.53E-54 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1028 382dfc51d909b777e05d2f868bfe6e04 212 Pfam PF00881 Nitroreductase family 16 192 1.6E-27 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_0804 da2f716938a74518bc4286960eb756f5 172 PIRSF PIRSF015195 1 172 2.5E-64 T 14-10-2018 IPR009859 Protein of unknown function, Gam-like llmg_0804 da2f716938a74518bc4286960eb756f5 172 Pfam PF07352 Bacteriophage Mu Gam like protein 14 172 6.6E-35 T 14-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 llmg_0804 da2f716938a74518bc4286960eb756f5 172 SUPERFAMILY SSF161266 9 172 2.22E-6 T 14-10-2018 llmg_0478 e1e07a258d4988e2c337062798e672a7 170 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 11 120 1.4E-20 T 14-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 llmg_0478 e1e07a258d4988e2c337062798e672a7 170 Gene3D G3DSA:3.40.50.450 7 158 3.9E-39 T 14-10-2018 llmg_0478 e1e07a258d4988e2c337062798e672a7 170 SUPERFAMILY SSF52309 3 154 3.66E-43 T 14-10-2018 llmg_0604 f66af85b3bb55130615462432f0e3753 307 SUPERFAMILY SSF56281 1 303 4.33E-74 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0604 f66af85b3bb55130615462432f0e3753 307 Hamap MF_01818 Ribonuclease BN [rbn]. 1 306 39.084 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 llmg_0604 f66af85b3bb55130615462432f0e3753 307 Pfam PF00753 Metallo-beta-lactamase superfamily 35 81 5.3E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0604 f66af85b3bb55130615462432f0e3753 307 Pfam PF12706 Beta-lactamase superfamily domain 205 272 3.5E-7 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0604 f66af85b3bb55130615462432f0e3753 307 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 305 1.3E-108 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 llmg_0604 f66af85b3bb55130615462432f0e3753 307 Gene3D G3DSA:3.60.15.10 1 305 6.6E-94 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_1896 ec3cfadda940d8812482955df074a0db 253 Pfam PF00005 ABC transporter 22 178 5.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1896 ec3cfadda940d8812482955df074a0db 253 Gene3D G3DSA:3.40.50.300 4 251 9.1E-64 T 14-10-2018 llmg_1896 ec3cfadda940d8812482955df074a0db 253 SUPERFAMILY SSF52540 5 240 3.84E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1896 ec3cfadda940d8812482955df074a0db 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1896 ec3cfadda940d8812482955df074a0db 253 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 7 253 4.7E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 llmg_1896 ec3cfadda940d8812482955df074a0db 253 SMART SM00382 31 232 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0201 7f7aa9f580cf9ba12627ebb12ee0edef 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 1 126 36.192 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 llmg_0201 7f7aa9f580cf9ba12627ebb12ee0edef 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 3 134 7.9E-62 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 llmg_0201 7f7aa9f580cf9ba12627ebb12ee0edef 142 SUPERFAMILY SSF51316 2 141 5.75E-59 T 14-10-2018 IPR011057 Mss4-like superfamily llmg_0201 7f7aa9f580cf9ba12627ebb12ee0edef 142 Pfam PF01641 SelR domain 5 125 2.4E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 llmg_0201 7f7aa9f580cf9ba12627ebb12ee0edef 142 Gene3D G3DSA:2.170.150.20 1 142 5.4E-58 T 14-10-2018 llmg_0343 2768d6681845df006d01dbaa68528b72 182 Gene3D G3DSA:1.10.1760.20 1 174 3.1E-21 T 14-10-2018 llmg_0343 2768d6681845df006d01dbaa68528b72 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 170 4.5E-52 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 llmg_0343 2768d6681845df006d01dbaa68528b72 182 Hamap MF_01572 UPF0397 protein . 2 182 28.93 T 14-10-2018 IPR022914 Protein of unknown function UPF0397 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 Gene3D G3DSA:2.40.37.10 13 366 7.9E-123 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 Gene3D G3DSA:3.20.20.10 15 232 7.9E-123 T 14-10-2018 IPR029066 PLP-binding barrel llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 SUPERFAMILY SSF50621 237 366 3.49E-50 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 SMART SM01005 242 367 2.9E-69 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 SUPERFAMILY SSF51419 13 243 2.22E-56 T 14-10-2018 IPR029066 PLP-binding barrel llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 9.2E-59 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 127 139 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 349 362 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 295 312 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 67 85 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 161 172 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 201 228 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 258 273 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 275 290 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 PRINTS PR00992 Alanine racemase signature 32 48 5.4E-62 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 47 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 Pfam PF00842 Alanine racemase, C-terminal domain 242 366 4.3E-44 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 TIGRFAM TIGR00492 alr: alanine racemase 8 366 1.6E-112 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_1704 7d8aa8a6524fbb9aa16d4926d8bdbc86 367 Hamap MF_01201 Alanine racemase. 6 367 32.992 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_0349 7ef23534d843a4d916d581710e30dd00 313 Pfam PF01497 Periplasmic binding protein 67 284 8.2E-23 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain llmg_0349 7ef23534d843a4d916d581710e30dd00 313 Gene3D G3DSA:3.40.50.1980 148 313 2.0E-41 T 14-10-2018 llmg_0349 7ef23534d843a4d916d581710e30dd00 313 Gene3D G3DSA:3.40.50.1980 23 147 3.3E-19 T 14-10-2018 llmg_0349 7ef23534d843a4d916d581710e30dd00 313 SUPERFAMILY SSF53807 37 299 1.06E-47 T 14-10-2018 llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 Pfam PF00582 Universal stress protein family 5 155 6.4E-36 T 14-10-2018 IPR006016 UspA llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 Gene3D G3DSA:3.40.50.620 1 155 1.5E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 PRINTS PR01438 Universal stress protein signature 133 155 7.0E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 PRINTS PR01438 Universal stress protein signature 5 23 7.0E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 PRINTS PR01438 Universal stress protein signature 115 127 7.0E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_0093 9492c040491efdce9b746f2d4f86c9ad 155 SUPERFAMILY SSF52402 5 155 4.02E-37 T 14-10-2018 llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 Pfam PF02687 FtsX-like permease family 564 656 2.2E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 Gene3D G3DSA:3.40.50.300 1 258 9.7E-66 T 14-10-2018 llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 SUPERFAMILY SSF52540 3 230 1.17E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 Pfam PF12704 MacB-like periplasmic core domain 264 503 1.4E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 SMART SM00382 32 227 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1853 6493b6e1cf5d1521e9dba8ed5d7a50b7 664 Pfam PF00005 ABC transporter 23 171 1.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1298 b955358dedc215d40d8b078edf989c9f 356 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 349 53.29 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 llmg_1298 b955358dedc215d40d8b078edf989c9f 356 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 347 4.7E-89 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 llmg_1298 b955358dedc215d40d8b078edf989c9f 356 SUPERFAMILY SSF53383 18 346 8.45E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1298 b955358dedc215d40d8b078edf989c9f 356 Gene3D G3DSA:3.40.640.10 36 257 1.6E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1298 b955358dedc215d40d8b078edf989c9f 356 Gene3D G3DSA:3.90.1150.10 20 339 1.6E-100 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_1298 b955358dedc215d40d8b078edf989c9f 356 Pfam PF00155 Aminotransferase class I and II 22 343 3.9E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 141 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 SUPERFAMILY SSF52080 4 145 4.06E-45 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 145 1.5E-50 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 145 1.0E-35 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 147 21.422 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 llmg_2362 7941f0b9869a0f88735ec8f0f3fdc0e7 147 Gene3D G3DSA:3.100.10.10 67 146 1.4E-23 T 14-10-2018 llmg_0387 dfad2262cca3808ad40425cbcf589ec2 267 SUPERFAMILY SSF52218 1 172 2.1E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0387 dfad2262cca3808ad40425cbcf589ec2 267 Pfam PF03358 NADPH-dependent FMN reductase 1 147 9.9E-30 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 llmg_0387 dfad2262cca3808ad40425cbcf589ec2 267 Gene3D G3DSA:3.40.50.360 1 212 1.9E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_1235 d00d1a2e1a2d9da47f98b93bf68f32af 218 Pfam PF00027 Cyclic nucleotide-binding domain 32 114 2.5E-15 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_1235 d00d1a2e1a2d9da47f98b93bf68f32af 218 Gene3D G3DSA:2.60.120.1460 5 213 1.1E-22 T 14-10-2018 llmg_1235 d00d1a2e1a2d9da47f98b93bf68f32af 218 SMART SM00100 13 134 6.1E-4 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_1235 d00d1a2e1a2d9da47f98b93bf68f32af 218 SUPERFAMILY SSF51206 24 138 1.31E-23 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like llmg_1904 facd79350ce8b2b2158021cf3fff2f9c 203 Gene3D G3DSA:3.40.109.10 3 203 1.9E-48 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1904 facd79350ce8b2b2158021cf3fff2f9c 203 SUPERFAMILY SSF55469 4 199 5.76E-44 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1904 facd79350ce8b2b2158021cf3fff2f9c 203 Pfam PF00881 Nitroreductase family 11 182 1.6E-25 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 Gene3D G3DSA:3.40.50.300 12 179 8.9E-46 T 14-10-2018 llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 PIRSF PIRSF006230 1 280 2.3E-95 T 14-10-2018 IPR016478 GTPase, MTG1 llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 Gene3D G3DSA:1.10.1580.10 180 269 6.3E-17 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 Pfam PF01926 50S ribosome-binding GTPase 123 195 1.3E-15 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 SUPERFAMILY SSF52540 9 190 3.18E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1175 a4b06bd496dd8eae22cd96fd5f64070b 282 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 275 2.1E-104 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 Gene3D G3DSA:3.30.830.10 245 426 5.0E-31 T 14-10-2018 llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 Pfam PF00675 Insulinase (Peptidase family M16) 63 175 7.0E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 Pfam PF05193 Peptidase M16 inactive domain 182 362 1.5E-14 T 14-10-2018 IPR007863 Peptidase M16, C-terminal llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 SUPERFAMILY SSF63411 279 415 4.54E-14 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 SUPERFAMILY SSF63411 17 219 2.97E-37 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 llmg_2226 309fc10c14c6ace1ee1a0df6f6978bac 427 Gene3D G3DSA:3.30.830.10 12 236 3.3E-54 T 14-10-2018 llmg_1134 a54d4118c9fd2c5811870f18687be7fe 76 Pfam PF13780 Domain of unknown function (DUF4176) 8 75 1.4E-20 T 14-10-2018 IPR025233 Protein of unknown function DUF4176 llmg_0729 803b32674552d62855d8a0e6020819b1 329 Gene3D G3DSA:3.40.35.10 164 328 1.3E-51 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 llmg_0729 803b32674552d62855d8a0e6020819b1 329 SUPERFAMILY SSF53062 3 137 2.49E-35 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 llmg_0729 803b32674552d62855d8a0e6020819b1 329 Pfam PF03830 PTS system sorbose subfamily IIB component 169 316 1.2E-50 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 llmg_0729 803b32674552d62855d8a0e6020819b1 329 Gene3D G3DSA:3.40.50.510 3 145 3.5E-39 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 llmg_0729 803b32674552d62855d8a0e6020819b1 329 SUPERFAMILY SSF52728 168 327 9.42E-54 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 llmg_0729 803b32674552d62855d8a0e6020819b1 329 Pfam PF03610 PTS system fructose IIA component 4 122 4.7E-37 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 llmg_1262 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1262 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1262 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1611 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1611 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1611 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0682 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0682 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0682 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0049 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0049 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0049 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_2110 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2110 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2110 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0822 46214dd8f78113b6fa5243dc03ba046e 407 Gene3D G3DSA:3.30.420.10 143 296 6.5E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0822 46214dd8f78113b6fa5243dc03ba046e 407 SUPERFAMILY SSF53098 124 286 1.52E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0822 46214dd8f78113b6fa5243dc03ba046e 407 Pfam PF00665 Integrase core domain 118 245 1.7E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 SUPERFAMILY SSF53697 247 605 8.78E-86 T 14-10-2018 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Pfam PF13522 Glutamine amidotransferase domain 63 190 1.1E-19 T 14-10-2018 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Gene3D G3DSA:3.60.20.10 2 242 5.0E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 605 37.343 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 605 1.9E-203 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Pfam PF01380 SIS domain 289 415 3.8E-25 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Pfam PF01380 SIS domain 465 586 1.5E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Gene3D G3DSA:3.40.50.10490 445 590 1.9E-113 T 14-10-2018 llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 SUPERFAMILY SSF56235 2 234 3.86E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_1516 801f148bf28975967fcea2eb4e0e798e 605 Gene3D G3DSA:3.40.50.10490 248 604 1.9E-113 T 14-10-2018 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 PIRSF PIRSF001467 8 124 1.7E-45 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 PIRSF PIRSF001467 140 195 1.5E-7 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 50 67 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 SUPERFAMILY SSF50891 12 193 3.8E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 Gene3D G3DSA:2.40.100.10 3 137 2.2E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 17 192 9.1E-48 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 2.7E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 29 44 2.7E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 67 2.7E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_1646 3bb4bb80d859429d60d484ed2154754f 196 Gene3D G3DSA:2.40.100.10 140 194 8.0E-13 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 Gene3D G3DSA:3.30.230.10 306 453 5.2E-18 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 Pfam PF13481 AAA domain 79 218 2.0E-14 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 SMART SM00382 87 240 1.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 44.313 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 SUPERFAMILY SSF54211 251 453 2.54E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 Pfam PF13541 Subunit ChlI of Mg-chelatase 361 425 2.8E-8 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 SUPERFAMILY SSF52540 66 287 4.37E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 244 270 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 318 341 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 10 34 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 79 107 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 120 137 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 170 194 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 PRINTS PR01874 DNA repair protein radA signature 209 237 8.0E-88 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 Gene3D G3DSA:3.40.50.300 66 282 2.4E-42 T 14-10-2018 llmg_2343 d8e8ff30a18884d18a8f6282ce51f537 453 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 1.0E-192 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 llmg_0508 775e6b033d784595f47044efc7318cf5 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 292 7.9E-65 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme llmg_0508 775e6b033d784595f47044efc7318cf5 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 llmg_0508 775e6b033d784595f47044efc7318cf5 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 8.3E-129 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 llmg_0508 775e6b033d784595f47044efc7318cf5 310 Gene3D G3DSA:3.40.50.1100 45 143 1.2E-116 T 14-10-2018 llmg_0508 775e6b033d784595f47044efc7318cf5 310 Gene3D G3DSA:3.40.50.1100 7 300 1.2E-116 T 14-10-2018 llmg_0508 775e6b033d784595f47044efc7318cf5 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 7.1E-122 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 llmg_0508 775e6b033d784595f47044efc7318cf5 310 SUPERFAMILY SSF53686 3 306 3.93E-96 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme llmg_1340 0054d280e9d68dc6b255338b22587007 411 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 408 51.683 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 llmg_1340 0054d280e9d68dc6b255338b22587007 411 SMART SM00382 108 258 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1340 0054d280e9d68dc6b255338b22587007 411 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 405 4.2E-197 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 llmg_1340 0054d280e9d68dc6b255338b22587007 411 Gene3D G3DSA:1.10.8.60 309 411 1.5E-40 T 14-10-2018 llmg_1340 0054d280e9d68dc6b255338b22587007 411 SUPERFAMILY SSF57716 9 44 5.42E-11 T 14-10-2018 llmg_1340 0054d280e9d68dc6b255338b22587007 411 SUPERFAMILY SSF52540 60 394 2.33E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1340 0054d280e9d68dc6b255338b22587007 411 Gene3D G3DSA:3.40.50.300 52 308 3.3E-105 T 14-10-2018 llmg_1340 0054d280e9d68dc6b255338b22587007 411 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 310 388 3.8E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_1340 0054d280e9d68dc6b255338b22587007 411 Pfam PF06689 ClpX C4-type zinc finger 10 46 1.7E-17 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 llmg_1340 0054d280e9d68dc6b255338b22587007 411 SMART SM00994 8 47 1.3E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 llmg_1340 0054d280e9d68dc6b255338b22587007 411 Gene3D G3DSA:3.30.50.30 1 48 8.7E-19 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily llmg_1340 0054d280e9d68dc6b255338b22587007 411 SMART SM01086 310 404 1.3E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_1340 0054d280e9d68dc6b255338b22587007 411 Pfam PF07724 AAA domain (Cdc48 subfamily) 108 304 2.1E-49 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 PIRSF PIRSF001461 1 220 1.6E-92 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 SUPERFAMILY SSF51366 4 215 3.3E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 Gene3D G3DSA:3.20.20.70 1 217 2.5E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 32 46 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 201 1.1E-80 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_2190 a1af24c05da88ee322f95351b67ab639 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 1.6E-85 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_1550 afc168d05e39bdb23aeb5bd90d131fd6 176 Hamap MF_01568 UPF0374 protein . 1 175 48.533 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 llmg_1550 afc168d05e39bdb23aeb5bd90d131fd6 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 4.8E-16 T 14-10-2018 IPR007295 Domain of unknown function DUF402 llmg_1550 afc168d05e39bdb23aeb5bd90d131fd6 176 PIRSF PIRSF028345 1 176 4.1E-76 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 llmg_1550 afc168d05e39bdb23aeb5bd90d131fd6 176 SUPERFAMILY SSF159234 4 171 1.83E-30 T 14-10-2018 IPR035930 FomD-like superfamily llmg_1550 afc168d05e39bdb23aeb5bd90d131fd6 176 Gene3D G3DSA:2.40.380.10 16 169 1.5E-9 T 14-10-2018 IPR035930 FomD-like superfamily llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 2.7E-95 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 SMART SM01211 1 220 3.2E-132 T 14-10-2018 llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 PIRSF PIRSF001586 1 222 2.6E-86 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 Gene3D G3DSA:3.40.50.880 1 221 3.0E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 SUPERFAMILY SSF52317 1 219 5.16E-76 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 7.9E-44 T 14-10-2018 llmg_0975 0900d68d9ee3360869f7dd3384b7a3a3 226 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 44.326 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_1923 93870ef37d06a608145ac6dfc497b5de 197 Gene3D G3DSA:3.40.50.1240 1 197 8.0E-40 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_1923 93870ef37d06a608145ac6dfc497b5de 197 SUPERFAMILY SSF53254 2 194 4.5E-42 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_1923 93870ef37d06a608145ac6dfc497b5de 197 SMART SM00855 2 155 2.7E-15 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_1923 93870ef37d06a608145ac6dfc497b5de 197 PIRSF PIRSF000709 1 167 4.0E-10 T 14-10-2018 llmg_1923 93870ef37d06a608145ac6dfc497b5de 197 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 5.6E-39 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_2238 489609392e7ea69e265adaca17bc68d3 250 SUPERFAMILY SSF53697 80 240 9.16E-29 T 14-10-2018 llmg_2238 489609392e7ea69e265adaca17bc68d3 250 Gene3D G3DSA:1.10.10.10 1 65 2.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2238 489609392e7ea69e265adaca17bc68d3 250 Gene3D G3DSA:3.40.50.10490 77 247 5.3E-28 T 14-10-2018 llmg_2238 489609392e7ea69e265adaca17bc68d3 250 Pfam PF01380 SIS domain 105 204 1.1E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_2238 489609392e7ea69e265adaca17bc68d3 250 Pfam PF01418 Helix-turn-helix domain, rpiR family 2 61 4.4E-10 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_2238 489609392e7ea69e265adaca17bc68d3 250 SUPERFAMILY SSF46689 2 63 2.51E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0298 14a29e945c6e51680e4205c7edccc03c 147 SMART SM00731 5 143 1.9E-57 T 14-10-2018 IPR006640 SprT-like llmg_0298 14a29e945c6e51680e4205c7edccc03c 147 Pfam PF10263 SprT-like family 12 98 6.7E-9 T 14-10-2018 IPR006640 SprT-like llmg_0298 14a29e945c6e51680e4205c7edccc03c 147 Pfam PF17283 SprT-like zinc ribbon domain 108 143 1.7E-11 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 SUPERFAMILY SSF55205 2 421 1.34E-134 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 409 2.6E-107 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 43.892 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 Gene3D G3DSA:3.65.10.10 21 233 9.8E-164 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 Gene3D G3DSA:3.65.10.10 9 416 9.8E-164 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_0517 aa1e0ce373bccca24c02a9b293e5817d 426 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 6.4E-167 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 48 102 5.0E-26 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 198 36.65 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 107 193 18.864 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 25 98 2.2E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 102 29.468 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Gene3D G3DSA:3.10.20.400 1 89 4.1E-40 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 SUPERFAMILY SSF101386 108 197 5.23E-23 T 14-10-2018 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Gene3D G3DSA:1.10.287.1080 106 199 2.6E-27 T 14-10-2018 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 111 196 3.1E-14 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 SUPERFAMILY SSF141734 5 102 1.18E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 llmg_1289 3bff611a04a10eca5e93484f36a20233 212 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 111 191 7.3E-29 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 Gene3D G3DSA:1.20.1560.10 1 332 1.3E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 Pfam PF00005 ABC transporter 369 518 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 SMART SM00382 378 570 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 Gene3D G3DSA:3.40.50.300 349 593 5.5E-82 T 14-10-2018 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 Pfam PF00664 ABC transporter transmembrane region 32 302 7.1E-37 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 SUPERFAMILY SSF52540 347 588 4.13E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1203 eb9635b8b5dfda5d95d5726a2441ed0a 594 SUPERFAMILY SSF90123 18 329 6.15E-60 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1841 16ceead30c2b75ed756cea593ee87c8e 86 SUPERFAMILY SSF46689 1 83 6.09E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1841 16ceead30c2b75ed756cea593ee87c8e 86 Pfam PF01527 Transposase 2 69 3.2E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1841 16ceead30c2b75ed756cea593ee87c8e 86 Gene3D G3DSA:1.10.10.60 6 84 5.1E-7 T 14-10-2018 llmg_0011 44de9367ed3650b36ed2b4c445f3b6b8 161 SUPERFAMILY SSF52540 2 102 3.69E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0011 44de9367ed3650b36ed2b4c445f3b6b8 161 Pfam PF13238 AAA domain 3 99 9.4E-8 T 14-10-2018 llmg_0011 44de9367ed3650b36ed2b4c445f3b6b8 161 Gene3D G3DSA:3.40.50.300 1 161 1.5E-14 T 14-10-2018 llmg_0963 5b76d47f7566d749da5fc0a08684ea54 451 Pfam PF02378 Phosphotransferase system, EIIC 29 365 2.5E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_0963 5b76d47f7566d749da5fc0a08684ea54 451 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 2.0E-71 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 llmg_0963 5b76d47f7566d749da5fc0a08684ea54 451 PIRSF PIRSF006351 1 449 9.9E-92 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 llmg_0755 8e70343f55c3e00a925766bbb19df700 129 Pfam PF08951 Enterocin A Immunity 30 99 1.5E-12 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 SUPERFAMILY SSF109604 336 474 1.23E-26 T 14-10-2018 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Gene3D G3DSA:1.10.3210.10 330 483 2.4E-18 T 14-10-2018 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 SMART SM00471 343 449 3.7E-13 T 14-10-2018 IPR003607 HD/PDEase domain llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Pfam PF12072 Domain of unknown function (DUF3552) 11 215 1.4E-47 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Pfam PF00013 KH domain 225 281 2.3E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Pfam PF01966 HD domain 347 439 9.7E-19 T 14-10-2018 IPR006674 HD domain llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Hamap MF_00335 Ribonuclease Y [rny]. 2 531 25.1 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 Gene3D G3DSA:3.30.1370.10 218 316 8.8E-9 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 SMART SM00322 219 286 5.1E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 SUPERFAMILY SSF54791 219 315 4.95E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 11 531 1.1E-225 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 llmg_2156 815a66a03e1843a29ebbd6046d9ca9b6 531 TIGRFAM TIGR00277 HDIG: HDIG domain 343 420 7.2E-24 T 14-10-2018 IPR006675 HDIG domain llmg_0163 604e93bc78d68c42ac0c55e76a824a27 104 Gene3D G3DSA:1.10.260.40 1 66 2.2E-8 T 14-10-2018 llmg_0163 604e93bc78d68c42ac0c55e76a824a27 104 SUPERFAMILY SSF47413 4 67 5.07E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1231 0385bd5d15233209e46428ca75ff9e56 193 SUPERFAMILY SSF46689 60 169 1.04E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1231 0385bd5d15233209e46428ca75ff9e56 193 SUPERFAMILY SSF48295 2 58 6.28E-9 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_1231 0385bd5d15233209e46428ca75ff9e56 193 Pfam PF13518 Helix-turn-helix domain 9 56 9.3E-7 T 14-10-2018 llmg_1231 0385bd5d15233209e46428ca75ff9e56 193 Pfam PF01527 Transposase 57 147 2.8E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1231 0385bd5d15233209e46428ca75ff9e56 193 Gene3D G3DSA:1.10.10.60 63 179 4.3E-8 T 14-10-2018 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 Pfam PF02163 Peptidase family M50 7 413 4.3E-77 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 SMART SM00228 199 271 1.2E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 425 5.5E-82 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 SUPERFAMILY SSF50156 185 280 1.09E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 Gene3D G3DSA:2.30.42.10 215 295 6.3E-21 T 14-10-2018 llmg_2413 561f88360ce69e8b061491f838fa06c0 428 Pfam PF13180 PDZ domain 216 279 1.0E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 llmg_2382 5b13a34ff100531afc8f4711ddbc3a2c 208 Pfam PF00573 Ribosomal protein L4/L1 family 17 205 1.6E-62 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 llmg_2382 5b13a34ff100531afc8f4711ddbc3a2c 208 Gene3D G3DSA:3.40.1370.10 2 208 4.2E-72 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2382 5b13a34ff100531afc8f4711ddbc3a2c 208 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 205 1.8E-75 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2382 5b13a34ff100531afc8f4711ddbc3a2c 208 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 208 35.404 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2382 5b13a34ff100531afc8f4711ddbc3a2c 208 SUPERFAMILY SSF52166 1 207 1.7E-74 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 634 652 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SUPERFAMILY SSF52540 159 548 2.12E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0986 d90715ac973e79c94952ed42e05062f6 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 678 696 2.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 711 725 2.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 604 622 2.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 649 667 2.7E-43 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Gene3D G3DSA:3.40.50.300 151 344 1.0E-73 T 14-10-2018 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Gene3D G3DSA:1.10.8.60 771 866 2.3E-23 T 14-10-2018 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SUPERFAMILY SSF52540 549 859 8.39E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SUPERFAMILY SSF81923 4 158 3.83E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 296 308 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Gene3D G3DSA:1.10.1780.10 1 150 1.1E-25 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 771 850 1.5E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 147 9.2E-10 T 14-10-2018 IPR004176 Clp, N-terminal llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 6.3E-9 T 14-10-2018 IPR004176 Clp, N-terminal llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Gene3D G3DSA:3.40.50.300 553 769 2.3E-87 T 14-10-2018 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 860 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Gene3D G3DSA:3.40.50.300 345 547 8.7E-70 T 14-10-2018 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SMART SM01086 771 860 2.5E-31 T 14-10-2018 IPR019489 Clp ATPase, C-terminal llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 599 764 1.7E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SMART SM00382 200 346 1.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0986 d90715ac973e79c94952ed42e05062f6 867 SMART SM00382 600 758 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0986 d90715ac973e79c94952ed42e05062f6 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 339 9.3E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_2422 b74bfa0c05d349939f2f2f3e4070d9d9 74 SUPERFAMILY SSF143567 3 74 1.44E-20 T 14-10-2018 IPR038073 YkuJ-like superfamily llmg_2422 b74bfa0c05d349939f2f2f3e4070d9d9 74 Gene3D G3DSA:3.30.720.20 2 74 2.4E-14 T 14-10-2018 IPR038073 YkuJ-like superfamily llmg_2422 b74bfa0c05d349939f2f2f3e4070d9d9 74 Pfam PF08796 Protein of unknown function (DUF1797) 8 73 3.1E-23 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 llmg_2422 b74bfa0c05d349939f2f2f3e4070d9d9 74 PIRSF PIRSF037356 1 74 5.0E-30 T 14-10-2018 IPR014904 Protein of unknown function DUF1797 llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 Pfam PF02033 Ribosome-binding factor A 6 110 4.5E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 97 1.0E-36 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 SUPERFAMILY SSF89919 1 113 3.01E-30 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 115 4.4E-30 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 Gene3D G3DSA:3.30.300.20 3 118 7.1E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 110 25.277 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 llmg_1791 740f5b04fb8805e2ccbf8a2d4a8a701c 119 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 Gene3D G3DSA:3.40.50.1980 168 280 1.6E-33 T 14-10-2018 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00691 Adhesin B signature 50 68 1.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00691 Adhesin B signature 258 276 1.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00691 Adhesin B signature 25 46 1.7E-8 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 SUPERFAMILY SSF53807 14 279 2.01E-70 T 14-10-2018 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 Gene3D G3DSA:3.40.50.1980 24 165 9.2E-38 T 14-10-2018 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 277 9.8E-65 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00690 Adhesin family signature 25 43 1.4E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00690 Adhesin family signature 56 69 1.4E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00690 Adhesin family signature 69 86 1.4E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_2400 83b55991871010e81e7dbb59c432ad2b 280 PRINTS PR00690 Adhesin family signature 218 236 1.4E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_0750 a9fd4567b38b83cbac79e67c43058e6d 90 Pfam PF01809 Haemolytic domain 2 68 1.4E-27 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor llmg_0750 a9fd4567b38b83cbac79e67c43058e6d 90 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 71 1.7E-25 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor llmg_0750 a9fd4567b38b83cbac79e67c43058e6d 90 SMART SM01234 1 68 7.9E-40 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor llmg_0750 a9fd4567b38b83cbac79e67c43058e6d 90 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 23.092 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor llmg_0750 a9fd4567b38b83cbac79e67c43058e6d 90 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 3.0E-25 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 PRINTS PR00449 Transforming protein P21 ras signature 135 148 6.7E-6 T 14-10-2018 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 PRINTS PR00449 Transforming protein P21 ras signature 26 47 6.7E-6 T 14-10-2018 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 PRINTS PR00449 Transforming protein P21 ras signature 173 195 6.7E-6 T 14-10-2018 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 Pfam PF01926 50S ribosome-binding GTPase 27 145 4.6E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 29.249 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 Gene3D G3DSA:3.40.50.300 1 195 6.4E-55 T 14-10-2018 llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 SUPERFAMILY SSF52540 5 195 8.92E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1339 d0dcb2837de08a4066fae1699a787da9 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 191 4.3E-74 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 llmg_2432 a9212bee72205773359a5333679d317d 903 Gene3D G3DSA:3.40.50.1970 476 679 2.1E-54 T 14-10-2018 llmg_2432 a9212bee72205773359a5333679d317d 903 Pfam PF00465 Iron-containing alcohol dehydrogenase 482 895 4.9E-106 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 llmg_2432 a9212bee72205773359a5333679d317d 903 Gene3D G3DSA:1.20.1090.10 682 903 5.8E-58 T 14-10-2018 llmg_2432 a9212bee72205773359a5333679d317d 903 SUPERFAMILY SSF53720 28 476 3.4E-66 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 llmg_2432 a9212bee72205773359a5333679d317d 903 Gene3D G3DSA:3.40.309.10 239 429 2.7E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 llmg_2432 a9212bee72205773359a5333679d317d 903 Pfam PF00171 Aldehyde dehydrogenase family 19 290 4.4E-18 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 llmg_2432 a9212bee72205773359a5333679d317d 903 SUPERFAMILY SSF56796 478 901 5.89E-102 T 14-10-2018 llmg_2432 a9212bee72205773359a5333679d317d 903 Gene3D G3DSA:3.40.605.10 31 469 2.7E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_2432 a9212bee72205773359a5333679d317d 903 PIRSF PIRSF000111 13 903 0.0 T 14-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 llmg_0321 f22abc185c77c9ca9580262d187dfcb8 157 Pfam PF01047 MarR family 37 95 8.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0321 f22abc185c77c9ca9580262d187dfcb8 157 SUPERFAMILY SSF46785 9 152 3.56E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0321 f22abc185c77c9ca9580262d187dfcb8 157 Gene3D G3DSA:1.10.10.10 1 149 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0321 f22abc185c77c9ca9580262d187dfcb8 157 SMART SM00347 30 133 9.3E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 SUPERFAMILY SSF57829 1 47 1.34E-14 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 47 4.7E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 Pfam PF00471 Ribosomal protein L33 3 47 5.5E-17 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 Gene3D G3DSA:2.20.28.120 1 48 1.5E-18 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0632 aa81fbe2db8c6957a05d1c3ae9741afd 48 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 48 12.898 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1886 53e4feb9eb09296806126fdaaec988a5 379 SUPERFAMILY SSF56349 72 367 9.42E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1886 53e4feb9eb09296806126fdaaec988a5 379 Pfam PF00589 Phage integrase family 180 362 3.3E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_1886 53e4feb9eb09296806126fdaaec988a5 379 Gene3D G3DSA:1.10.443.10 177 379 4.1E-39 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1886 53e4feb9eb09296806126fdaaec988a5 379 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 72 127 1.6E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_1886 53e4feb9eb09296806126fdaaec988a5 379 Gene3D G3DSA:1.10.150.130 68 173 1.1E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 SMART SM00487 586 767 1.3E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Gene3D G3DSA:3.40.50.10810 561 793 7.1E-57 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Pfam PF04434 SWIM zinc finger 47 74 1.5E-5 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Pfam PF00176 SNF2 family N-terminal domain 603 857 9.0E-44 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 SUPERFAMILY SSF52540 564 786 9.88E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 SMART SM00490 897 979 1.0E-21 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 SUPERFAMILY SSF52540 788 1033 6.61E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Gene3D G3DSA:1.20.120.850 808 1025 7.7E-78 T 14-10-2018 llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Gene3D G3DSA:3.40.50.300 794 993 7.7E-78 T 14-10-2018 llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Pfam PF08455 Bacterial SNF2 helicase associated 222 583 9.9E-57 T 14-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial llmg_2319 31001d34198d334d7e8e97ca2aa777c8 1034 Pfam PF00271 Helicase conserved C-terminal domain 868 979 3.6E-19 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0314 aaeb87f52850ab98f63dcfc2f4ebbc90 270 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 24 269 1.3E-80 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 llmg_0314 aaeb87f52850ab98f63dcfc2f4ebbc90 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 268 1.2E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0314 aaeb87f52850ab98f63dcfc2f4ebbc90 270 Gene3D G3DSA:1.10.3720.10 71 270 1.2E-32 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0314 aaeb87f52850ab98f63dcfc2f4ebbc90 270 SUPERFAMILY SSF161098 75 259 8.5E-37 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1271 cdf4968d555894035a8d004bc1649715 448 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 443 6.2E-207 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 llmg_1271 cdf4968d555894035a8d004bc1649715 448 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 444 35.917 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 llmg_1271 cdf4968d555894035a8d004bc1649715 448 SUPERFAMILY SSF51905 2 372 1.13E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1271 cdf4968d555894035a8d004bc1649715 448 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 346 369 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 llmg_1271 cdf4968d555894035a8d004bc1649715 448 Gene3D G3DSA:3.50.50.60 3 180 3.6E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1271 cdf4968d555894035a8d004bc1649715 448 Gene3D G3DSA:3.50.50.60 300 448 6.7E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1271 cdf4968d555894035a8d004bc1649715 448 Pfam PF01134 Glucose inhibited division protein A 6 376 1.6E-115 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 SUPERFAMILY SSF46785 8 138 6.59E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 Pfam PF01047 MarR family 31 88 1.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 SMART SM00347 23 127 1.4E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 Gene3D G3DSA:1.10.10.10 3 139 3.1E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 6.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 6.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 6.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1027 be57c72cc87fe359e3c80d3ad87cb6f9 139 SMART SM00418 28 105 0.0035 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_2228 631d744418adceeedb87398d31951424 120 Gene3D G3DSA:3.10.290.10 1 70 2.0E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_2228 631d744418adceeedb87398d31951424 120 Pfam PF13275 S4 domain 6 69 6.3E-24 T 14-10-2018 llmg_2228 631d744418adceeedb87398d31951424 120 SUPERFAMILY SSF55174 2 65 1.33E-14 T 14-10-2018 llmg_2228 631d744418adceeedb87398d31951424 120 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 3 63 2.5E-26 T 14-10-2018 IPR014330 RNA-binding S4-related,YaaA llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 77 13.778 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 Pfam PF01649 Ribosomal protein S20 2 76 1.2E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 Gene3D G3DSA:1.20.58.110 1 77 1.5E-22 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 18 76 1.0E-18 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 76 1.7E-20 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1921 ae90e1680474aaecaa00a0134c154d88 77 SUPERFAMILY SSF46992 3 76 6.54E-24 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 Gene3D G3DSA:3.40.50.360 1 134 1.1E-36 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 Hamap MF_00128 Protein NrdI [nrdI]. 2 132 27.298 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 PIRSF PIRSF005087 1 135 8.1E-43 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 TIGRFAM TIGR00333 nrdI: nrdI protein 5 127 4.0E-25 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 Pfam PF07972 NrdI Flavodoxin like 4 122 2.7E-36 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI llmg_1542 accc3df3d3e132f71faf40e952ee93e3 140 SUPERFAMILY SSF52218 2 128 1.38E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_1556 0eca745f080846419f7999831e9e35fe 327 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 320 2.6E-115 T 14-10-2018 IPR010119 Gluconeogenesis factor llmg_1556 0eca745f080846419f7999831e9e35fe 327 Hamap MF_00973 Gluconeogenesis factor. 2 322 34.031 T 14-10-2018 IPR010119 Gluconeogenesis factor llmg_1556 0eca745f080846419f7999831e9e35fe 327 Gene3D G3DSA:3.40.50.12300 1 324 7.0E-122 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily llmg_1556 0eca745f080846419f7999831e9e35fe 327 SUPERFAMILY SSF142338 3 317 3.66E-95 T 14-10-2018 llmg_1556 0eca745f080846419f7999831e9e35fe 327 Pfam PF01933 Uncharacterised protein family UPF0052 6 297 2.3E-92 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 llmg_2050 477155733a9dc25b0be60321d81153d8 395 SUPERFAMILY SSF52540 9 226 2.52E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2050 477155733a9dc25b0be60321d81153d8 395 SUPERFAMILY SSF50447 203 302 6.09E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_2050 477155733a9dc25b0be60321d81153d8 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 1.2E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site llmg_2050 477155733a9dc25b0be60321d81153d8 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.8E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 59.139 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_2050 477155733a9dc25b0be60321d81153d8 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.1E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 SUPERFAMILY SSF50465 303 394 9.35E-35 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal llmg_2050 477155733a9dc25b0be60321d81153d8 395 Gene3D G3DSA:2.40.30.10 339 393 3.4E-27 T 14-10-2018 llmg_2050 477155733a9dc25b0be60321d81153d8 395 Gene3D G3DSA:2.40.30.10 206 335 5.8E-53 T 14-10-2018 llmg_2050 477155733a9dc25b0be60321d81153d8 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.9E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.9E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.9E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.9E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.9E-25 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_2050 477155733a9dc25b0be60321d81153d8 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 1.2E-30 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal llmg_2050 477155733a9dc25b0be60321d81153d8 395 Gene3D G3DSA:3.40.50.300 1 203 1.2E-70 T 14-10-2018 llmg_2050 477155733a9dc25b0be60321d81153d8 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 4.1E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 llmg_0336 6e98a3dd109aeffe55b6baf6f9f62f1d 286 Gene3D G3DSA:3.40.190.10 124 233 4.5E-88 T 14-10-2018 llmg_0336 6e98a3dd109aeffe55b6baf6f9f62f1d 286 Pfam PF03180 NLPA lipoprotein 40 281 4.2E-97 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0336 6e98a3dd109aeffe55b6baf6f9f62f1d 286 PIRSF PIRSF002854 2 281 2.5E-102 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0336 6e98a3dd109aeffe55b6baf6f9f62f1d 286 SUPERFAMILY SSF53850 39 282 2.52E-78 T 14-10-2018 llmg_0336 6e98a3dd109aeffe55b6baf6f9f62f1d 286 Gene3D G3DSA:3.40.190.10 39 271 4.5E-88 T 14-10-2018 llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 PRINTS PR01438 Universal stress protein signature 101 113 5.6E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 PRINTS PR01438 Universal stress protein signature 119 141 5.6E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 PRINTS PR01438 Universal stress protein signature 5 23 5.6E-21 T 14-10-2018 IPR006015 Universal stress protein A llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 PIRSF PIRSF006276 1 141 1.2E-23 T 14-10-2018 IPR006015 Universal stress protein A llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 Gene3D G3DSA:3.40.50.620 2 141 7.7E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 SUPERFAMILY SSF52402 5 141 3.6E-37 T 14-10-2018 llmg_1662 f8d81fc991696e7a1fba560d227eaf26 141 Pfam PF00582 Universal stress protein family 5 141 1.3E-37 T 14-10-2018 IPR006016 UspA llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 16 428 1.3E-143 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 SUPERFAMILY SSF103491 2 423 3.01E-120 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 Gene3D G3DSA:1.10.3370.10 2 428 3.2E-141 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 267 286 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 401 419 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 367 385 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 312 334 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 19 37 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 4.9E-88 T 14-10-2018 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 Pfam PF00344 SecY translocase 69 415 8.8E-100 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 PIRSF PIRSF004557 1 437 9.7E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 Hamap MF_01465 Protein translocase subunit SecY [secY]. 6 432 27.804 T 14-10-2018 IPR026593 Protein translocase subunit SecY llmg_2361 9b2f148b8d5f1b6be5ce6deb51618aa6 439 ProSitePatterns PS00756 Protein secY signature 2. 166 183 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_1260 4715280397282f6c75022aa17b9228a6 86 Pfam PF03780 Asp23 family, cell envelope-related function 28 71 6.8E-8 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 llmg_1752 c4f24788112375a41eeec584b991810f 1174 Gene3D G3DSA:3.40.50.300 1 247 4.1E-57 T 14-10-2018 llmg_1752 c4f24788112375a41eeec584b991810f 1174 PIRSF PIRSF005719 1 1174 1.3E-275 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein llmg_1752 c4f24788112375a41eeec584b991810f 1174 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1171 22.786 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 llmg_1752 c4f24788112375a41eeec584b991810f 1174 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1162 1.8E-59 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal llmg_1752 c4f24788112375a41eeec584b991810f 1174 SUPERFAMILY SSF75553 483 684 2.35E-53 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 llmg_1752 c4f24788112375a41eeec584b991810f 1174 Pfam PF06470 SMC proteins Flexible Hinge Domain 521 637 1.7E-28 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 llmg_1752 c4f24788112375a41eeec584b991810f 1174 SMART SM00968 520 637 4.2E-38 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 llmg_1752 c4f24788112375a41eeec584b991810f 1174 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1169 0.0 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 llmg_1752 c4f24788112375a41eeec584b991810f 1174 SUPERFAMILY SSF52540 1 1162 6.4E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1752 c4f24788112375a41eeec584b991810f 1174 Gene3D G3DSA:3.30.70.1620 580 666 7.3E-57 T 14-10-2018 llmg_1752 c4f24788112375a41eeec584b991810f 1174 Gene3D G3DSA:1.20.1060.20 498 673 7.3E-57 T 14-10-2018 llmg_1752 c4f24788112375a41eeec584b991810f 1174 Gene3D G3DSA:3.40.50.300 1018 1174 4.5E-44 T 14-10-2018 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.4E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.4E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.4E-12 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 SUPERFAMILY SSF51230 81 154 9.55E-22 T 14-10-2018 IPR011053 Single hybrid motif llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 Gene3D G3DSA:2.40.50.100 76 154 2.1E-25 T 14-10-2018 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 2.8E-39 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 llmg_1782 8d46b569d3aed1b8e1e4897053eeeeb8 155 Pfam PF00364 Biotin-requiring enzyme 81 154 5.3E-19 T 14-10-2018 IPR000089 Biotin/lipoyl attachment llmg_0693 d4373dd5a575fc9de9dddac3a573a671 182 Gene3D G3DSA:1.20.1260.10 1 182 1.0E-59 T 14-10-2018 IPR012347 Ferritin-like llmg_0693 d4373dd5a575fc9de9dddac3a573a671 182 SUPERFAMILY SSF47240 4 172 2.77E-58 T 14-10-2018 IPR009078 Ferritin-like superfamily llmg_1453 deb2ba004fc490b38db048727ec49282 211 Gene3D G3DSA:3.40.50.720 2 211 2.4E-55 T 14-10-2018 llmg_1453 deb2ba004fc490b38db048727ec49282 211 SUPERFAMILY SSF51735 1 202 3.12E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1453 deb2ba004fc490b38db048727ec49282 211 Pfam PF13460 NAD(P)H-binding 7 187 1.1E-31 T 14-10-2018 IPR016040 NAD(P)-binding domain llmg_0186 52f8a33ec3b8884ec533f8dbf25605d1 363 SUPERFAMILY SSF51445 1 242 2.6E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0186 52f8a33ec3b8884ec533f8dbf25605d1 363 Gene3D G3DSA:2.40.100.10 244 361 6.4E-42 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_0186 52f8a33ec3b8884ec533f8dbf25605d1 363 SUPERFAMILY SSF50891 247 360 2.01E-40 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_0186 52f8a33ec3b8884ec533f8dbf25605d1 363 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 359 4.7E-139 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic llmg_0186 52f8a33ec3b8884ec533f8dbf25605d1 363 Gene3D G3DSA:3.20.20.70 2 240 2.4E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 8.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 Pfam PF01016 Ribosomal L27 protein 10 88 6.6E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 3.2E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 3.2E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 3.2E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 91 25.756 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 88 3.3E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 Gene3D G3DSA:2.40.50.100 28 92 8.6E-25 T 14-10-2018 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 SUPERFAMILY SSF110324 10 89 1.29E-30 T 14-10-2018 llmg_1491 93f232e73961483b45f6b2b8dc451660 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 Pfam PF00717 Peptidase S24-like 155 227 6.9E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 Pfam PF01381 Helix-turn-helix 7 61 8.0E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 SMART SM00530 6 61 3.8E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 SUPERFAMILY SSF47413 1 67 7.68E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 SUPERFAMILY SSF51306 125 240 3.49E-11 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 Gene3D G3DSA:2.10.109.10 123 247 1.7E-6 T 14-10-2018 llmg_1204 e3a3de8643de1178651e55dca39a99d4 252 Gene3D G3DSA:1.10.260.40 3 99 3.3E-20 T 14-10-2018 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 11 453 1.0E-159 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 SMART SM00760 364 433 6.6E-39 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Gene3D G3DSA:3.40.50.300 116 282 3.2E-50 T 14-10-2018 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 8 454 30.637 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 SUPERFAMILY SSF52540 117 328 1.41E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Gene3D G3DSA:3.30.300.180 2 82 8.7E-6 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 365 433 4.8E-30 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Gene3D G3DSA:1.10.1750.10 354 454 2.1E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 182 196 1.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 414 433 1.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 248 275 1.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 150 170 1.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 214 228 1.2E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 SUPERFAMILY SSF48295 357 454 1.2E-33 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 ProSitePatterns PS01008 DnaA protein signature. 414 433 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Gene3D G3DSA:1.10.8.60 283 353 6.4E-18 T 14-10-2018 llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 Pfam PF00308 Bacterial dnaA protein 117 333 1.9E-89 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA llmg_0001 0f5e3d3b04573918dbbbfa732d88a4ca 454 SMART SM00382 149 280 3.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1541 6ef17d6e9ff2d384ff716a535a232060 72 Gene3D G3DSA:3.40.30.10 1 72 1.5E-23 T 14-10-2018 llmg_1541 6ef17d6e9ff2d384ff716a535a232060 72 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 2 72 1.2E-36 T 14-10-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 llmg_1541 6ef17d6e9ff2d384ff716a535a232060 72 Pfam PF00462 Glutaredoxin 2 54 1.9E-13 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 llmg_1541 6ef17d6e9ff2d384ff716a535a232060 72 SUPERFAMILY SSF52833 1 69 9.96E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1872 eea53253f8660e5a622597634c4d2936 490 SUPERFAMILY SSF53756 6 490 1.29E-117 T 14-10-2018 llmg_1872 eea53253f8660e5a622597634c4d2936 490 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 11 487 2.0E-167 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 llmg_1872 eea53253f8660e5a622597634c4d2936 490 Gene3D G3DSA:3.40.50.2000 263 472 9.0E-171 T 14-10-2018 llmg_1872 eea53253f8660e5a622597634c4d2936 490 Hamap MF_00484 Glycogen synthase [glgA]. 11 488 45.234 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 llmg_1872 eea53253f8660e5a622597634c4d2936 490 Pfam PF00534 Glycosyl transferases group 1 296 453 1.8E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 llmg_1872 eea53253f8660e5a622597634c4d2936 490 Pfam PF08323 Starch synthase catalytic domain 12 249 6.5E-79 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 llmg_1872 eea53253f8660e5a622597634c4d2936 490 Gene3D G3DSA:3.40.50.2000 13 486 9.0E-171 T 14-10-2018 llmg_2063 2178d4aab0a774fe9f6352e569085410 242 Pfam PF00588 SpoU rRNA Methylase family 97 235 3.0E-42 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 llmg_2063 2178d4aab0a774fe9f6352e569085410 242 SUPERFAMILY SSF75217 68 242 7.19E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_2063 2178d4aab0a774fe9f6352e569085410 242 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 2.9E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 llmg_2063 2178d4aab0a774fe9f6352e569085410 242 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 241 9.0E-78 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 llmg_2063 2178d4aab0a774fe9f6352e569085410 242 Gene3D G3DSA:3.40.1280.10 77 241 4.5E-55 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_2063 2178d4aab0a774fe9f6352e569085410 242 SMART SM00967 6 80 1.6E-17 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 llmg_2063 2178d4aab0a774fe9f6352e569085410 242 SUPERFAMILY SSF55315 1 76 6.54E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_2063 2178d4aab0a774fe9f6352e569085410 242 Gene3D G3DSA:3.30.1330.30 1 75 1.6E-14 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_1773 3ecd66a68696a0da6182f715753edef9 79 Pfam PF05532 CsbD-like 5 57 1.9E-14 T 14-10-2018 IPR008462 CsbD-like domain llmg_1773 3ecd66a68696a0da6182f715753edef9 79 SUPERFAMILY SSF69047 4 67 4.32E-12 T 14-10-2018 IPR036629 YjbJ superfamily llmg_1773 3ecd66a68696a0da6182f715753edef9 79 Gene3D G3DSA:1.10.1470.10 4 66 3.1E-7 T 14-10-2018 IPR036629 YjbJ superfamily llmg_1056 78723b0aee720d8819026162eda85255 314 Gene3D G3DSA:1.20.1510.10 10 221 1.8E-27 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_1056 78723b0aee720d8819026162eda85255 314 Pfam PF01545 Cation efflux family 13 219 8.6E-28 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_1056 78723b0aee720d8819026162eda85255 314 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 300 4.7E-34 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_1056 78723b0aee720d8819026162eda85255 314 SUPERFAMILY SSF161111 7 223 3.27E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_1544 0184b2a0e68b28909fe70698edc6a31b 325 Gene3D G3DSA:1.10.620.20 10 295 1.9E-109 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 llmg_1544 0184b2a0e68b28909fe70698edc6a31b 325 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 13 324 9.2E-143 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 llmg_1544 0184b2a0e68b28909fe70698edc6a31b 325 SUPERFAMILY SSF47240 10 324 3.06E-96 T 14-10-2018 IPR009078 Ferritin-like superfamily llmg_1544 0184b2a0e68b28909fe70698edc6a31b 325 Pfam PF00268 Ribonucleotide reductase, small chain 16 287 1.7E-79 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1367 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1367 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1367 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1367 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0684 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0684 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0684 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0684 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1840 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1840 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1840 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1840 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1437 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1437 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1437 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1437 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1713 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1713 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1713 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1713 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0549 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0549 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0549 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0549 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0901 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0901 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0901 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0901 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1233 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1233 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1233 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1233 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1654 1e550281c56139d00f81c7e0be397f44 279 Pfam PF00665 Integrase core domain 118 233 1.5E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1654 1e550281c56139d00f81c7e0be397f44 279 SUPERFAMILY SSF53098 115 277 1.64E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1654 1e550281c56139d00f81c7e0be397f44 279 Gene3D G3DSA:3.30.420.10 112 271 3.1E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1654 1e550281c56139d00f81c7e0be397f44 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_2277 73820c98391662efd42c233e17cd8a55 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.6E-24 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 llmg_2277 73820c98391662efd42c233e17cd8a55 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 4.3E-30 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal llmg_2277 73820c98391662efd42c233e17cd8a55 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 30.987 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 llmg_2277 73820c98391662efd42c233e17cd8a55 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 5.1E-62 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2277 73820c98391662efd42c233e17cd8a55 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 7.0E-16 T 14-10-2018 llmg_2277 73820c98391662efd42c233e17cd8a55 141 SUPERFAMILY SSF46906 67 139 2.88E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily llmg_2277 73820c98391662efd42c233e17cd8a55 141 Gene3D G3DSA:1.10.10.250 72 140 3.2E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily llmg_2277 73820c98391662efd42c233e17cd8a55 141 SMART SM00649 9 140 1.2E-82 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 llmg_2277 73820c98391662efd42c233e17cd8a55 141 Gene3D G3DSA:3.30.1550.10 2 71 4.0E-33 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily llmg_2277 73820c98391662efd42c233e17cd8a55 141 SUPERFAMILY SSF54747 3 72 2.62E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily llmg_0276 0536816515a458455e7eb025b7e743a6 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 235 250 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 131 148 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 SUPERFAMILY SSF51430 6 269 2.23E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_0276 0536816515a458455e7eb025b7e743a6 281 PRINTS PR00069 Aldo-keto reductase signature 93 111 1.3E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 PRINTS PR00069 Aldo-keto reductase signature 165 194 1.3E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 PRINTS PR00069 Aldo-keto reductase signature 38 62 1.3E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 PRINTS PR00069 Aldo-keto reductase signature 131 148 1.3E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 PRINTS PR00069 Aldo-keto reductase signature 202 226 1.3E-44 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 Gene3D G3DSA:3.20.20.100 2 281 1.4E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_0276 0536816515a458455e7eb025b7e743a6 281 PIRSF PIRSF000097 1 279 2.6E-82 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_0276 0536816515a458455e7eb025b7e743a6 281 Pfam PF00248 Aldo/keto reductase family 17 266 5.8E-53 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain llmg_0276 0536816515a458455e7eb025b7e743a6 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 42 59 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 52 66 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 111 17.962 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 101 2.0E-46 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 SUPERFAMILY SSF54211 3 113 4.05E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 110 5.4E-26 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 Pfam PF00825 Ribonuclease P 4 106 8.8E-30 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 llmg_0142 c165091af16a18a57e6a09560c4bc12d 117 Gene3D G3DSA:3.30.230.10 1 114 2.9E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 Gene3D G3DSA:1.10.260.40 1 62 1.2E-22 T 14-10-2018 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 SMART SM00354 3 73 1.9E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 Pfam PF13377 Periplasmic binding protein-like domain 168 329 6.0E-28 T 14-10-2018 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 SUPERFAMILY SSF53822 63 329 5.1E-68 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 8.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 8.0E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 Gene3D G3DSA:3.40.50.2300 159 326 2.2E-66 T 14-10-2018 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.4E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 Gene3D G3DSA:3.40.50.2300 64 321 2.2E-66 T 14-10-2018 llmg_0956 ec166a1cca2165858b6414b7fdc12d95 332 SUPERFAMILY SSF47413 2 61 6.14E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 SUPERFAMILY SSF52540 3 272 9.04E-115 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 Pfam PF06418 CTP synthase N-terminus 4 268 2.3E-119 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 Gene3D G3DSA:3.40.50.880 288 535 2.4E-100 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 Hamap MF_01227 CTP synthase [pyrG]. 3 534 49.291 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 Pfam PF00117 Glutamine amidotransferase class-I 303 528 8.0E-57 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 TIGRFAM TIGR00337 PyrG: CTP synthase 2 528 1.8E-238 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 Gene3D G3DSA:3.40.50.300 1 287 1.8E-125 T 14-10-2018 llmg_0467 13b6bb5208063c4b9c374bef90001c7b 535 SUPERFAMILY SSF52317 290 533 6.73E-77 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1054 6d299f42ca1c6f9e356002522dd5b797 180 SMART SM00470 13 109 0.0018 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_1054 6d299f42ca1c6f9e356002522dd5b797 180 Pfam PF02195 ParB-like nuclease domain 15 106 3.9E-11 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_1054 6d299f42ca1c6f9e356002522dd5b797 180 SUPERFAMILY SSF110849 11 142 1.26E-25 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 37 51 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 Gene3D G3DSA:3.30.70.580 1 65 2.3E-26 T 14-10-2018 llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 Gene3D G3DSA:3.30.70.1560 66 166 1.0E-39 T 14-10-2018 llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 Pfam PF00849 RNA pseudouridylate synthase 2 147 2.6E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 SUPERFAMILY SSF55120 2 175 8.64E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1100 fdac0cfe09c85e504cc4ae68f7e2380d 177 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 6 175 2.5E-54 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_1121 c707f5bb9d4a2988874e122dee02e9d3 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 296 3.4E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 llmg_0351 9aa9a47b96ec2ab4131b999d7948d7bf 391 Gene3D G3DSA:1.20.1250.20 197 391 6.9E-14 T 14-10-2018 llmg_0351 9aa9a47b96ec2ab4131b999d7948d7bf 391 SUPERFAMILY SSF103473 8 387 9.29E-56 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0351 9aa9a47b96ec2ab4131b999d7948d7bf 391 Gene3D G3DSA:1.20.1250.20 7 186 4.2E-30 T 14-10-2018 llmg_0351 9aa9a47b96ec2ab4131b999d7948d7bf 391 Pfam PF07690 Major Facilitator Superfamily 14 325 1.4E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 Pfam PF00154 recA bacterial DNA recombination protein 22 287 6.8E-134 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 SUPERFAMILY SSF52540 20 286 2.14E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 316 333 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 180 209 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 108 137 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 225 253 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 142 171 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 PRINTS PR00142 RecA protein signature 262 291 3.9E-79 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 19 342 2.4E-157 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 Gene3D G3DSA:3.40.50.300 41 286 3.1E-76 T 14-10-2018 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 SMART SM00382 72 243 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 Gene3D G3DSA:3.30.250.10 287 367 2.0E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 SUPERFAMILY SSF54752 288 345 1.2E-19 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 Hamap MF_00268 Protein RecA [recA]. 20 348 50.773 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 llmg_0374 1f8f40c88d7ddca1a8c2ccf27de184f7 387 ProSitePatterns PS00321 recA signature. 228 236 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 SUPERFAMILY SSF47928 7 96 2.48E-18 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 PRINTS PR00125 ATP synthase delta subunit signature 149 167 4.2E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 PRINTS PR00125 ATP synthase delta subunit signature 83 97 4.2E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 PRINTS PR00125 ATP synthase delta subunit signature 134 149 4.2E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 PRINTS PR00125 ATP synthase delta subunit signature 5 24 4.2E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 PRINTS PR00125 ATP synthase delta subunit signature 72 83 4.2E-17 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 Gene3D G3DSA:1.10.520.20 6 95 1.8E-12 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 175 14.526 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 172 5.2E-27 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1949 e247f7af8b63fff578607b5b754f4996 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 173 8.3E-35 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:3.20.20.140 758 989 1.1E-43 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:1.10.150.870 1481 1617 6.2E-49 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 590 805 8.0E-36 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF11490 DNA polymerase III polC-type N-terminus II 91 202 1.1E-8 T 14-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF14480 DNA polymerase III polC-type N-terminus I 4 76 1.4E-18 T 14-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1635 384.239 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF00929 Exonuclease 594 748 1.6E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:3.30.1900.20 1161 1283 8.8E-52 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 SUPERFAMILY SSF53098 592 1063 8.5E-91 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF02811 PHP domain 508 867 4.7E-44 T 14-10-2018 IPR004013 PHP domain GO:0003824 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:1.10.150.700 1284 1372 2.7E-28 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:1.10.150.700 1419 1480 4.9E-15 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 405 1631 0.0 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 SUPERFAMILY SSF50249 408 485 1.03E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:3.30.420.10 584 757 1.1E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:2.40.50.140 385 492 1.7E-25 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:2.40.50.140 231 359 3.6E-23 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 1014 1441 4.5E-92 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 SMART SM00481 507 574 6.0E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Gene3D G3DSA:1.10.100.20 1183 1230 8.8E-52 T 14-10-2018 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 Pfam PF14579 Helix-hairpin-helix motif 1548 1623 9.0E-7 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2409 362025b2f29a9c423eea4805629aea82 1635 SMART SM00479 592 758 4.9E-42 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_1077 495b3be752f7e6b2ea669663c2805d3a 140 Gene3D G3DSA:3.10.180.10 1 128 4.1E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1077 495b3be752f7e6b2ea669663c2805d3a 140 SUPERFAMILY SSF54593 1 131 1.75E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1077 495b3be752f7e6b2ea669663c2805d3a 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 1.2E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_0423 ce360f118725c986151e615d86d4d754 260 Pfam PF00005 ABC transporter 21 163 2.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0423 ce360f118725c986151e615d86d4d754 260 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 12 253 1.0E-96 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 llmg_0423 ce360f118725c986151e615d86d4d754 260 SUPERFAMILY SSF52540 5 224 3.91E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0423 ce360f118725c986151e615d86d4d754 260 SMART SM00382 29 218 8.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0423 ce360f118725c986151e615d86d4d754 260 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0423 ce360f118725c986151e615d86d4d754 260 Gene3D G3DSA:3.40.50.300 2 239 4.4E-66 T 14-10-2018 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Gene3D G3DSA:3.30.300.10 12 284 1.3E-175 T 14-10-2018 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Gene3D G3DSA:3.30.300.10 103 389 1.3E-175 T 14-10-2018 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 397 55.168 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 PIRSF PIRSF000497 1 398 4.5E-174 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Gene3D G3DSA:3.30.300.10 6 247 1.3E-175 T 14-10-2018 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 101 4.6E-41 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 SUPERFAMILY SSF55973 126 246 7.06E-49 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 SUPERFAMILY SSF55973 247 397 3.61E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 8.3E-48 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 1.3E-67 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 396 4.4E-177 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_2160 3e7c24e60a5335cffe0b8a261c6ccaf6 399 SUPERFAMILY SSF55973 4 110 3.92E-45 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 llmg_1709 5009a5810aef125aa1f0212881362b2e 160 Gene3D G3DSA:2.160.10.10 2 160 1.8E-47 T 14-10-2018 llmg_1709 5009a5810aef125aa1f0212881362b2e 160 SUPERFAMILY SSF51161 38 159 1.52E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_1709 5009a5810aef125aa1f0212881362b2e 160 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 115 143 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 llmg_1709 5009a5810aef125aa1f0212881362b2e 160 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 141 5.0E-10 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 SUPERFAMILY SSF53067 1 101 2.63E-25 T 14-10-2018 llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 Gene3D G3DSA:3.30.420.40 3 216 1.9E-45 T 14-10-2018 llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 SUPERFAMILY SSF53067 109 213 1.94E-6 T 14-10-2018 llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 215 4.8E-52 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 Gene3D G3DSA:3.30.420.40 95 188 1.9E-45 T 14-10-2018 llmg_0306 d2b19ab37fc1f1cff76c40b3968d125a 241 Pfam PF00814 Glycoprotease family 32 223 8.0E-30 T 14-10-2018 IPR000905 Gcp-like domain llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 Gene3D G3DSA:3.40.390.10 528 714 2.6E-8 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 SUPERFAMILY SSF52058 107 326 2.31E-15 T 14-10-2018 llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 SUPERFAMILY SSF55486 569 719 1.09E-12 T 14-10-2018 llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 133 158 7.7E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 211 234 4.0E-10 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 184 209 1.1E-9 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 167 182 1.4E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 236 261 3.3E-8 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 262 287 3.3E-7 T 14-10-2018 IPR011889 Bacterial surface protein 26-residue repeat llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 131 243 1.3E-27 T 14-10-2018 IPR005046 Protein of unknown function DUF285 llmg_1503 f8c95a4ca72f157b19457cd5fe87cb95 730 Gene3D G3DSA:3.80.10.10 83 339 6.9E-23 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily llmg_1576 5303f80631fa8371234570bd0476bef3 347 Gene3D G3DSA:1.10.10.10 1 83 4.6E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1576 5303f80631fa8371234570bd0476bef3 347 Gene3D G3DSA:3.30.450.40 104 328 9.8E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily llmg_1576 5303f80631fa8371234570bd0476bef3 347 SUPERFAMILY SSF55781 69 335 1.9E-34 T 14-10-2018 llmg_1576 5303f80631fa8371234570bd0476bef3 347 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 330 2.5E-79 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 llmg_1576 5303f80631fa8371234570bd0476bef3 347 PIRSF PIRSF005485 1 335 1.4E-101 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 llmg_1576 5303f80631fa8371234570bd0476bef3 347 SUPERFAMILY SSF46785 1 83 7.05E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1576 5303f80631fa8371234570bd0476bef3 347 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 70 1.3E-9 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 llmg_1576 5303f80631fa8371234570bd0476bef3 347 Gene3D G3DSA:3.30.390.60 126 227 9.8E-18 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily llmg_1576 5303f80631fa8371234570bd0476bef3 347 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 324 27.546 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 llmg_1576 5303f80631fa8371234570bd0476bef3 347 Pfam PF01628 HrcA protein C terminal domain 103 316 3.9E-35 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 SUPERFAMILY SSF51735 22 294 5.25E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 Gene3D G3DSA:3.40.50.720 18 339 8.9E-61 T 14-10-2018 llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 223 2.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 2.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 101 112 2.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 2.7E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2543 7f8dcd9e95e6fcf90121cba9c5b3eaa8 339 Pfam PF00106 short chain dehydrogenase 30 225 8.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 19.388 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 2.1E-26 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 Gene3D G3DSA:3.30.1280.10 2 82 1.3E-26 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 SUPERFAMILY SSF82697 1 78 3.66E-24 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 11 78 4.0E-21 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_0974 6d7c35e0eb48b24c3c5c12ae8169ce52 88 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 78 4.3E-19 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 llmg_1842 0fac718f10815449a5ce98ffbc3f4125 34 SUPERFAMILY SSF56349 1 32 1.32E-7 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1842 0fac718f10815449a5ce98ffbc3f4125 34 Pfam PF00589 Phage integrase family 1 31 1.2E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_1842 0fac718f10815449a5ce98ffbc3f4125 34 Gene3D G3DSA:1.10.443.10 1 34 3.1E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 SUPERFAMILY SSF51215 26 147 1.31E-8 T 14-10-2018 IPR037923 Transcription regulator HTH-like llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 SMART SM00342 185 268 9.7E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 Pfam PF12833 Helix-turn-helix domain 192 269 1.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 Gene3D G3DSA:2.60.120.10 23 87 2.5E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 SUPERFAMILY SSF46689 221 275 3.63E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 Gene3D G3DSA:1.10.10.60 218 272 1.0E-14 T 14-10-2018 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 Pfam PF02311 AraC-like ligand binding domain 27 121 3.7E-5 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 Gene3D G3DSA:1.10.10.60 168 217 1.4E-16 T 14-10-2018 llmg_1001 8e5b209b2f9ac8757d267818a736e44c 310 SUPERFAMILY SSF46689 169 219 4.39E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2325 2003ec7a467d6327da630d1ade2ed7c1 168 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 14 155 1.9E-22 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related llmg_2325 2003ec7a467d6327da630d1ade2ed7c1 168 Gene3D G3DSA:2.30.110.10 1 158 3.3E-43 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 llmg_2325 2003ec7a467d6327da630d1ade2ed7c1 168 SUPERFAMILY SSF50475 1 165 2.36E-43 T 14-10-2018 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 Pfam PF00696 Amino acid kinase family 10 244 3.4E-36 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 Hamap MF_00456 Glutamate 5-kinase [proB]. 10 268 36.016 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.3E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PRINTS PR00474 Glutamate 5-kinase family signature 47 61 4.3E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 4.3E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PRINTS PR00474 Glutamate 5-kinase family signature 121 142 4.3E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PRINTS PR00474 Glutamate 5-kinase family signature 81 109 4.3E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 SUPERFAMILY SSF53633 10 265 9.82E-62 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 PIRSF PIRSF000729 5 267 5.6E-89 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 TIGRFAM TIGR01027 proB: glutamate 5-kinase 10 267 4.2E-87 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0885 c0091df1d2c6712b3d824d739fa4d853 268 Gene3D G3DSA:3.40.1160.10 1 267 4.8E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 Gene3D G3DSA:2.40.100.10 70 208 5.8E-38 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 226 241 1.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 129 141 1.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 103 118 1.5E-12 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 Gene3D G3DSA:2.40.100.10 216 276 1.4E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 SUPERFAMILY SSF50891 90 274 3.21E-46 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_0385 0e6da19c6bd7eb967169cb3b8c564aa7 277 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 90 270 6.5E-44 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 Gene3D G3DSA:2.30.30.100 201 248 1.1E-10 T 14-10-2018 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 SUPERFAMILY SSF50037 202 247 4.44E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 Gene3D G3DSA:3.30.930.10 3 198 6.8E-46 T 14-10-2018 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 144 1.6E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 Pfam PF02237 Biotin protein ligase C terminal domain 201 246 1.5E-9 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 SUPERFAMILY SSF55681 11 186 1.26E-40 T 14-10-2018 llmg_2162 b974112008ca3b3d05722d9441aa06ce 250 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 21 246 3.2E-40 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 299 93.823 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Gene3D G3DSA:3.90.78.10 214 299 2.6E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 197 296 1.4E-26 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Pfam PF01565 FAD binding domain 34 162 1.0E-23 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 SUPERFAMILY SSF56176 10 190 3.69E-44 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Gene3D G3DSA:3.30.465.10 87 213 1.4E-43 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 297 1.6E-70 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 Gene3D G3DSA:3.30.43.10 6 86 2.5E-25 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 llmg_1329 5c601f2f6e983451c5a3788bf844057f 299 SUPERFAMILY SSF56194 193 298 1.03E-36 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1740 af2e426827f2e11408709d63a593d520 251 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 71 1.1E-12 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_1740 af2e426827f2e11408709d63a593d520 251 Gene3D G3DSA:3.40.50.10490 91 251 1.2E-28 T 14-10-2018 llmg_1740 af2e426827f2e11408709d63a593d520 251 SUPERFAMILY SSF53697 84 247 4.79E-26 T 14-10-2018 llmg_1740 af2e426827f2e11408709d63a593d520 251 Pfam PF01380 SIS domain 110 230 3.3E-13 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1740 af2e426827f2e11408709d63a593d520 251 Gene3D G3DSA:1.10.10.10 1 73 1.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1740 af2e426827f2e11408709d63a593d520 251 SUPERFAMILY SSF46689 3 70 6.81E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 SUPERFAMILY SSF52540 4 219 7.28E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 SMART SM00382 29 207 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 Gene3D G3DSA:3.40.50.300 1 233 1.6E-58 T 14-10-2018 llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 Pfam PF00005 ABC transporter 20 159 5.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1553 ada0f74bd636d29fdd8e190e23563f6d 292 Pfam PF13732 Domain of unknown function (DUF4162) 212 289 1.1E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 5.2E-55 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 Gene3D G3DSA:3.90.1170.10 1 137 1.0E-50 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 SUPERFAMILY SSF54686 1 135 7.85E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.8E-35 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.202 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2376 d941ff8890e375b69ab74bc6d082863a 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 7.2E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 llmg_1287 3e97002415174fda464df7e2835a5905 319 SMART SM00450 115 216 7.9E-17 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1287 3e97002415174fda464df7e2835a5905 319 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 267 40.014 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 llmg_1287 3e97002415174fda464df7e2835a5905 319 Gene3D G3DSA:3.30.70.100 1 97 1.7E-29 T 14-10-2018 llmg_1287 3e97002415174fda464df7e2835a5905 319 Pfam PF00581 Rhodanese-like domain 117 210 3.5E-9 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1287 3e97002415174fda464df7e2835a5905 319 Pfam PF12368 Rhodanase C-terminal 222 288 2.2E-14 T 14-10-2018 IPR022111 Rhodanase, C-terminal llmg_1287 3e97002415174fda464df7e2835a5905 319 SUPERFAMILY SSF52821 88 248 5.21E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1287 3e97002415174fda464df7e2835a5905 319 Gene3D G3DSA:3.40.250.10 102 248 2.5E-41 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 SUPERFAMILY SSF51419 1 222 4.22E-67 T 14-10-2018 IPR029066 PLP-binding barrel llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 Gene3D G3DSA:3.20.20.10 1 225 3.9E-67 T 14-10-2018 IPR029066 PLP-binding barrel llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 224 26.592 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 Pfam PF01168 Alanine racemase, N-terminal domain 8 220 1.5E-15 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 PIRSF PIRSF004848 1 225 5.0E-64 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 llmg_2059 3111b1ed6e7593178cd6c9baf2d4d863 225 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 224 8.0E-46 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 Pfam PF13662 Toprim domain 81 171 2.4E-24 T 14-10-2018 IPR006171 TOPRIM domain llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.2E-83 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 Gene3D G3DSA:1.10.8.420 1 53 4.0E-21 T 14-10-2018 llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 SMART SM00493 80 165 3.1E-13 T 14-10-2018 IPR006171 TOPRIM domain llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 104.731 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 Pfam PF02132 RecR protein 39 78 4.8E-17 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 SUPERFAMILY SSF111304 1 198 2.88E-75 T 14-10-2018 IPR023627 Recombination protein RecR llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 Gene3D G3DSA:3.40.1360.10 77 198 3.3E-47 T 14-10-2018 llmg_0359 af6acf9daac3518dab86f4301bb2e01d 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 9 338 34.548 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 PIRSF PIRSF003314 6 348 3.8E-116 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 Pfam PF01070 FMN-dependent dehydrogenase 163 329 3.1E-18 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 SUPERFAMILY SSF51395 34 346 2.56E-67 T 14-10-2018 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 Gene3D G3DSA:3.20.20.70 7 349 2.7E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0428 8879d2f1a8e9413bb27eefa810bbb619 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 11 337 2.4E-119 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 llmg_2323 ce95deed266b3e273377e44fb166de99 259 Gene3D G3DSA:3.10.180.10 12 257 3.5E-55 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_2323 ce95deed266b3e273377e44fb166de99 259 Gene3D G3DSA:3.10.180.40 66 202 3.5E-55 T 14-10-2018 llmg_2323 ce95deed266b3e273377e44fb166de99 259 Pfam PF14507 CppA C-terminal 149 257 5.7E-28 T 14-10-2018 IPR032703 CppA, C-terminal llmg_2323 ce95deed266b3e273377e44fb166de99 259 Pfam PF14506 CppA N-terminal 12 123 3.5E-26 T 14-10-2018 IPR032702 CppA, N-terminal llmg_2323 ce95deed266b3e273377e44fb166de99 259 SUPERFAMILY SSF54593 13 68 4.48E-5 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 Gene3D G3DSA:1.20.1560.10 5 335 2.2E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 Gene3D G3DSA:3.40.50.300 349 590 3.6E-87 T 14-10-2018 llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 Pfam PF00664 ABC transporter transmembrane region 39 303 8.0E-46 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 SMART SM00382 374 561 4.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 Pfam PF00005 ABC transporter 365 515 1.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 SUPERFAMILY SSF52540 347 585 2.55E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1856 d8cce2428112476e154f8b55dd215d3f 590 SUPERFAMILY SSF90123 26 334 1.96E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 19 448 8.9E-126 T 14-10-2018 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 92 449 1.0E-20 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 Gene3D G3DSA:3.40.1350.30 131 287 8.5E-108 T 14-10-2018 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 Gene3D G3DSA:2.40.50.140 2 75 3.4E-14 T 14-10-2018 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 Gene3D G3DSA:3.40.50.150 87 450 8.5E-108 T 14-10-2018 llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 SUPERFAMILY SSF50249 5 61 7.42E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 438 448 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site llmg_1315 edb793b856535f40daa4cf9a6b3e4cee 456 SUPERFAMILY SSF53335 79 455 9.75E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2512 208c6e9436b658763b1c9d15c4799c47 227 Pfam PF13545 Crp-like helix-turn-helix domain 151 225 6.8E-13 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_2512 208c6e9436b658763b1c9d15c4799c47 227 Gene3D G3DSA:2.60.120.1460 17 226 1.1E-32 T 14-10-2018 llmg_2512 208c6e9436b658763b1c9d15c4799c47 227 SMART SM00419 169 218 4.2E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_2512 208c6e9436b658763b1c9d15c4799c47 227 SUPERFAMILY SSF51206 16 146 1.7E-22 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like llmg_2512 208c6e9436b658763b1c9d15c4799c47 227 SUPERFAMILY SSF46785 148 226 7.99E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0759 a547d4cc38579b8bc81569a3016f1828 319 PIRSF PIRSF005355 1 167 4.7E-20 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 llmg_0759 a547d4cc38579b8bc81569a3016f1828 319 PIRSF PIRSF005355 176 316 8.5E-17 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 llmg_0759 a547d4cc38579b8bc81569a3016f1828 319 Pfam PF01040 UbiA prenyltransferase family 19 272 2.3E-25 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 llmg_0406 e232d7f0dca0bc47282dbd7cb3bba118 105 Gene3D G3DSA:3.40.30.10 1 103 2.6E-20 T 14-10-2018 llmg_0406 e232d7f0dca0bc47282dbd7cb3bba118 105 SUPERFAMILY SSF52833 3 101 4.76E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0406 e232d7f0dca0bc47282dbd7cb3bba118 105 Pfam PF00085 Thioredoxin 11 101 1.1E-15 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 llmg_0886 441510f9f7769b132cc5269f35049b44 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 5.4E-153 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0886 441510f9f7769b132cc5269f35049b44 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 414 40.693 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0886 441510f9f7769b132cc5269f35049b44 414 PIRSF PIRSF000151 1 414 4.8E-175 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 llmg_0886 441510f9f7769b132cc5269f35049b44 414 SUPERFAMILY SSF53720 4 414 3.27E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 llmg_0886 441510f9f7769b132cc5269f35049b44 414 Gene3D G3DSA:3.40.605.10 15 409 1.2E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_0886 441510f9f7769b132cc5269f35049b44 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 llmg_0886 441510f9f7769b132cc5269f35049b44 414 Pfam PF00171 Aldehyde dehydrogenase family 11 281 1.5E-19 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 llmg_0886 441510f9f7769b132cc5269f35049b44 414 Pfam PF00171 Aldehyde dehydrogenase family 315 377 6.0E-7 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 llmg_0886 441510f9f7769b132cc5269f35049b44 414 Gene3D G3DSA:3.40.309.10 223 372 1.2E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 Pfam PF00005 ABC transporter 47 177 3.9E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 SUPERFAMILY SSF54106 422 467 1.31E-7 T 14-10-2018 llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 SMART SM00257 423 467 5.2E-12 T 14-10-2018 IPR018392 LysM domain llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 SMART SM00382 56 227 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 Pfam PF01476 LysM domain 424 467 1.3E-9 T 14-10-2018 IPR018392 LysM domain llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 Gene3D G3DSA:3.10.350.10 421 467 2.5E-15 T 14-10-2018 IPR036779 LysM domain superfamily llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 SUPERFAMILY SSF52540 43 240 6.35E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1623 190f6309a67b02dc3325daa3b208e51d 476 Gene3D G3DSA:3.40.50.300 10 303 7.5E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 Gene3D G3DSA:3.30.390.30 330 434 1.2E-11 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 Gene3D G3DSA:3.50.50.60 2 318 9.2E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 363 429 7.8E-9 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 312 2.8E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 2.1E-25 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 2.1E-25 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 2.1E-25 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.1E-25 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 2.1E-25 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 Gene3D G3DSA:3.50.50.60 139 255 9.2E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 429 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 329 350 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-44 T 14-10-2018 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 PIRSF PIRSF000350 1 434 1.1E-61 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 SUPERFAMILY SSF51905 1 299 8.42E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1702 410aa093fafc96ea1445d759c5cff4f3 435 SUPERFAMILY SSF55424 330 432 2.23E-16 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 SUPERFAMILY SSF51971 154 415 2.18E-61 T 14-10-2018 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 SUPERFAMILY SSF46548 5 166 4.6E-29 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 141 1.8E-18 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 474 2.9E-169 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 Gene3D G3DSA:3.50.50.60 288 475 7.6E-8 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 Gene3D G3DSA:3.50.50.60 155 287 3.0E-34 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 156 462 2.5E-24 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 Gene3D G3DSA:1.10.1060.10 8 154 3.1E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 PRINTS PR00419 Adrenodoxin reductase family signature 157 179 1.3E-21 T 14-10-2018 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 PRINTS PR00419 Adrenodoxin reductase family signature 180 193 1.3E-21 T 14-10-2018 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 PRINTS PR00419 Adrenodoxin reductase family signature 222 232 1.3E-21 T 14-10-2018 llmg_1184 3eb9e19a40aa794377406c715c05a13c 479 PRINTS PR00419 Adrenodoxin reductase family signature 297 311 1.3E-21 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 191 5.3E-56 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 2.9E-6 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 2.9E-6 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 Gene3D G3DSA:3.40.50.880 1 193 9.4E-60 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 126 138 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 3 17 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 106 114 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00097 Anthranilate synthase component II signature 169 182 2.0E-30 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 Pfam PF00117 Glutamine amidotransferase class-I 4 192 3.1E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_1153 4475ba14cff7de3eb1819048697273da 193 SUPERFAMILY SSF52317 1 192 7.64E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 5.6E-12 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 5.6E-12 T 14-10-2018 llmg_1153 4475ba14cff7de3eb1819048697273da 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 5.6E-12 T 14-10-2018 llmg_2533 b7a42379cd7ae8737d345e6d27be3d62 264 Pfam PF08708 Primase C terminal 1 (PriCT-1) 203 262 1.1E-9 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_2533 b7a42379cd7ae8737d345e6d27be3d62 264 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 7 174 7.4E-20 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_2533 b7a42379cd7ae8737d345e6d27be3d62 264 SUPERFAMILY SSF56747 5 160 4.18E-11 T 14-10-2018 llmg_2533 b7a42379cd7ae8737d345e6d27be3d62 264 SMART SM00943 7 175 1.9E-31 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_2533 b7a42379cd7ae8737d345e6d27be3d62 264 SMART SM00942 201 264 8.1E-19 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_0456 619de30bd730606c1f5254474bb466ec 221 Gene3D G3DSA:1.10.150.240 15 92 8.8E-72 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_0456 619de30bd730606c1f5254474bb466ec 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 3.5E-24 T 14-10-2018 llmg_0456 619de30bd730606c1f5254474bb466ec 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 8.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0456 619de30bd730606c1f5254474bb466ec 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 8.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0456 619de30bd730606c1f5254474bb466ec 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 8.8E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0456 619de30bd730606c1f5254474bb466ec 221 Gene3D G3DSA:3.40.50.1000 3 192 8.8E-72 T 14-10-2018 IPR023214 HAD superfamily llmg_0456 619de30bd730606c1f5254474bb466ec 221 SUPERFAMILY SSF56784 1 204 2.8E-48 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0456 619de30bd730606c1f5254474bb466ec 221 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 2 189 1.9E-84 T 14-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 llmg_0456 619de30bd730606c1f5254474bb466ec 221 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 2 184 1.9E-59 T 14-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase llmg_0456 619de30bd730606c1f5254474bb466ec 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 89 187 2.8E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0292 af3da08ce414a16791159a453402a917 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 1 372 61.958 T 14-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 llmg_0292 af3da08ce414a16791159a453402a917 376 SUPERFAMILY SSF53187 4 366 9.88E-62 T 14-10-2018 llmg_0292 af3da08ce414a16791159a453402a917 376 Gene3D G3DSA:3.40.630.10 4 358 1.3E-112 T 14-10-2018 llmg_0292 af3da08ce414a16791159a453402a917 376 Pfam PF07687 Peptidase dimerisation domain 173 271 2.4E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain llmg_0292 af3da08ce414a16791159a453402a917 376 SUPERFAMILY SSF55031 173 281 2.36E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_0292 af3da08ce414a16791159a453402a917 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 4 360 3.2E-85 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_0292 af3da08ce414a16791159a453402a917 376 Pfam PF01546 Peptidase family M20/M25/M40 67 369 7.5E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_0292 af3da08ce414a16791159a453402a917 376 Gene3D G3DSA:3.30.70.360 172 287 1.3E-112 T 14-10-2018 llmg_0292 af3da08ce414a16791159a453402a917 376 PIRSF PIRSF005962 2 374 2.3E-101 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 PIRSF PIRSF000450 1 309 1.8E-145 T 14-10-2018 IPR033752 MetA family llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 40 289 7.0E-133 T 14-10-2018 llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.6E-127 T 14-10-2018 IPR033752 MetA family llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 40.845 T 14-10-2018 IPR033752 MetA family llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 SUPERFAMILY SSF52317 18 295 2.19E-93 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 Gene3D G3DSA:3.40.50.880 1 300 5.0E-120 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_2182 7c22eca7bc235e98322eaba9479bafbb 319 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 299 3.6E-121 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 llmg_2308 ea72089325f670a45bdf6e119b845d6b 376 Gene3D G3DSA:3.90.1150.10 16 365 5.1E-112 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_2308 ea72089325f670a45bdf6e119b845d6b 376 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 llmg_2308 ea72089325f670a45bdf6e119b845d6b 376 Pfam PF00155 Aminotransferase class I and II 49 364 4.0E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_2308 ea72089325f670a45bdf6e119b845d6b 376 Gene3D G3DSA:3.40.640.10 57 272 5.1E-112 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_2308 ea72089325f670a45bdf6e119b845d6b 376 SUPERFAMILY SSF53383 48 374 2.69E-74 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 Gene3D G3DSA:3.40.190.10 80 170 5.2E-12 T 14-10-2018 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 Pfam PF03466 LysR substrate binding domain 89 236 8.7E-17 T 14-10-2018 IPR005119 LysR, substrate-binding llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 SUPERFAMILY SSF46785 4 84 3.86E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 SUPERFAMILY SSF53850 86 238 8.83E-22 T 14-10-2018 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 Gene3D G3DSA:1.10.10.10 2 79 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 3.2E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 Gene3D G3DSA:3.40.190.10 171 239 3.6E-5 T 14-10-2018 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 17 28 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 38 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0390 7251be4d2a1705ceca8130ca014121a5 272 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 49 4.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 SMART SM00433 37 635 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Gene3D G3DSA:3.30.565.10 14 222 2.7E-87 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 SMART SM00387 33 179 2.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 492 508 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 574 590 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 114 128 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 530 542 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR00418 DNA topoisomerase II family signature 510 527 1.1E-70 T 14-10-2018 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 6 640 50.105 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 SUPERFAMILY SSF55874 7 221 1.1E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Pfam PF01751 Toprim domain 425 535 4.4E-18 T 14-10-2018 IPR006171 TOPRIM domain llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Pfam PF00204 DNA gyrase B 224 394 3.1E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 199 212 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 611 627 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 184 199 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 378 398 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 244 262 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 314 330 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 364 378 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 476 485 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 595 607 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 PRINTS PR01159 DNA gyrase subunit B signature 8 18 3.0E-56 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 177 1.7E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Gene3D G3DSA:3.30.230.10 223 404 4.1E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 6 643 0.0 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 2.8E-30 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 SUPERFAMILY SSF56719 400 640 8.63E-87 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 SUPERFAMILY SSF54211 224 395 7.02E-56 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1539 7f8cc10f6e4b94dee76a27b945d826ff 644 Gene3D G3DSA:3.40.50.670 412 644 6.7E-105 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 llmg_1914 489011aef5d31b1955bd0d23c522e816 278 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 241 3.5E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_1914 489011aef5d31b1955bd0d23c522e816 278 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 9 267 3.8E-45 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1914 489011aef5d31b1955bd0d23c522e816 278 Gene3D G3DSA:3.40.50.1000 8 269 3.8E-52 T 14-10-2018 IPR023214 HAD superfamily llmg_1914 489011aef5d31b1955bd0d23c522e816 278 Gene3D G3DSA:3.30.1240.10 91 197 3.8E-52 T 14-10-2018 llmg_1914 489011aef5d31b1955bd0d23c522e816 278 SUPERFAMILY SSF56784 4 274 1.65E-60 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1914 489011aef5d31b1955bd0d23c522e816 278 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 269 4.8E-61 T 14-10-2018 llmg_1243 62fa622c1282e91f05a089b8e70cbe10 795 Pfam PF00759 Glycosyl hydrolase family 9 305 730 9.1E-14 T 14-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 llmg_1243 62fa622c1282e91f05a089b8e70cbe10 795 SUPERFAMILY SSF81296 199 295 6.51E-13 T 14-10-2018 IPR014756 Immunoglobulin E-set llmg_1243 62fa622c1282e91f05a089b8e70cbe10 795 Gene3D G3DSA:2.60.40.10 214 298 3.3E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1243 62fa622c1282e91f05a089b8e70cbe10 795 Pfam PF02927 Cellulase N-terminal ig-like domain 218 289 1.4E-7 T 14-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 llmg_1243 62fa622c1282e91f05a089b8e70cbe10 795 SUPERFAMILY SSF48208 300 785 2.15E-58 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 SMART SM00729 21 250 7.9E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 Pfam PF04055 Radical SAM superfamily 41 202 7.6E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 Pfam PF16199 Radical_SAM C-terminal domain 211 294 2.0E-27 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 SUPERFAMILY SSF102114 4 305 1.02E-51 T 14-10-2018 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 4 302 1.1E-115 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 llmg_2563 3e3a80797fcf1df0e79d7062ffa244a4 313 Gene3D G3DSA:3.80.30.20 39 241 3.9E-14 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe llmg_1327 878af419ec0c9228caf648589bd97181 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 255 4.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1327 878af419ec0c9228caf648589bd97181 262 SUPERFAMILY SSF161098 3 255 9.29E-49 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1327 878af419ec0c9228caf648589bd97181 262 Gene3D G3DSA:1.10.3720.10 4 262 5.5E-44 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1192 d6ea93e9d2592dfaf85c5b5d50109ef1 242 Pfam PF02616 Segregation and condensation protein ScpA 22 233 3.1E-30 T 14-10-2018 IPR003768 Segregation and condensation protein A llmg_1192 d6ea93e9d2592dfaf85c5b5d50109ef1 242 Hamap MF_01805 Segregation and condensation protein A [scpA]. 5 239 24.831 T 14-10-2018 IPR003768 Segregation and condensation protein A llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Pfam PF14815 NUDIX domain 239 328 3.8E-13 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Gene3D G3DSA:3.90.79.10 228 385 1.0E-16 T 14-10-2018 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Gene3D G3DSA:1.10.1670.10 14 216 5.1E-89 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 SUPERFAMILY SSF55811 224 344 4.46E-14 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 11 271 1.3E-101 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 169 1.1E-19 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Gene3D G3DSA:1.10.340.30 25 136 5.1E-89 T 14-10-2018 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 SMART SM00478 43 194 1.1E-53 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 196 212 2.9E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 Pfam PF00633 Helix-hairpin-helix motif 103 132 1.9E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 SMART SM00525 195 215 2.8E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 llmg_1717 72785f2dcf2f1d0def39feba1c4f9873 386 SUPERFAMILY SSF48150 7 226 7.07E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 378 39.432 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 SMART SM00271 4 61 1.2E-28 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 SUPERFAMILY SSF57938 141 219 4.45E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 SUPERFAMILY SSF49493 270 355 1.57E-22 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Pfam PF00226 DnaJ domain 5 66 1.3E-24 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Gene3D G3DSA:2.60.260.20 124 260 9.2E-36 T 14-10-2018 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 SUPERFAMILY SSF46565 1 102 6.67E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Pfam PF00684 DnaJ central domain 154 218 5.1E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Gene3D G3DSA:2.60.260.20 265 344 7.8E-27 T 14-10-2018 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 PRINTS PR00625 DnaJ domain signature 41 61 6.0E-32 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 PRINTS PR00625 DnaJ domain signature 25 40 6.0E-32 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 PRINTS PR00625 DnaJ domain signature 7 25 6.0E-32 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 PRINTS PR00625 DnaJ domain signature 61 80 6.0E-32 T 14-10-2018 IPR001623 DnaJ domain llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Gene3D G3DSA:2.10.230.10 154 218 9.2E-36 T 14-10-2018 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 361 1.2E-137 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Gene3D G3DSA:1.10.287.110 2 120 2.1E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 SUPERFAMILY SSF49493 121 265 3.01E-18 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 llmg_2502 0db37dac7da4ca1783fd5bbf925b495a 379 Pfam PF01556 DnaJ C terminal domain 127 344 9.0E-41 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 SUPERFAMILY SSF52821 431 538 5.62E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 427 4.9E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 SUPERFAMILY SSF51905 144 314 1.13E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Gene3D G3DSA:3.40.250.10 448 546 6.8E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-15 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 1.1E-15 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 234 248 1.1E-15 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 1.1E-15 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 SUPERFAMILY SSF51905 4 198 1.69E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 SUPERFAMILY SSF55424 320 442 2.06E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Gene3D G3DSA:3.50.50.60 4 337 7.1E-171 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 SMART SM00450 451 544 8.9E-17 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.8E-21 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.8E-21 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 2.8E-21 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.8E-21 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 2.8E-21 T 14-10-2018 llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Pfam PF00581 Rhodanese-like domain 454 536 3.3E-11 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Gene3D G3DSA:3.50.50.60 114 437 7.1E-171 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1770 5c5a576773d8adbbc0882bc2e1a70d25 547 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 304 9.0E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 PIRSF PIRSF001332 1 236 1.3E-98 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 Pfam PF03306 Alpha-acetolactate decarboxylase 7 224 1.6E-78 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 5 236 7.8E-103 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 Gene3D G3DSA:3.30.1330.80 7 220 2.1E-73 T 14-10-2018 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 Gene3D G3DSA:3.30.1330.80 81 203 2.1E-73 T 14-10-2018 llmg_1275 d5845cd1d7c332dfd435865706fce267 236 SUPERFAMILY SSF117856 6 236 2.62E-79 T 14-10-2018 llmg_1076 4ee35087aca2f9dec875c7f7c92b909f 183 Gene3D G3DSA:3.40.630.30 2 183 1.3E-31 T 14-10-2018 llmg_1076 4ee35087aca2f9dec875c7f7c92b909f 183 SUPERFAMILY SSF55729 2 152 1.13E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1076 4ee35087aca2f9dec875c7f7c92b909f 183 Pfam PF13302 Acetyltransferase (GNAT) domain 8 151 1.3E-21 T 14-10-2018 IPR000182 GNAT domain llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 22 189 1.0E-43 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 Pfam PF01966 HD domain 27 139 1.1E-12 T 14-10-2018 IPR006674 HD domain llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 SUPERFAMILY SSF109604 8 191 1.65E-30 T 14-10-2018 llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 Gene3D G3DSA:1.10.3210.10 4 196 1.7E-56 T 14-10-2018 llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 TIGRFAM TIGR00277 HDIG: HDIG domain 26 118 3.7E-8 T 14-10-2018 IPR006675 HDIG domain llmg_0237 4b988928ab31c8e13c9c68993170e58b 196 SMART SM00471 23 150 4.7E-5 T 14-10-2018 IPR003607 HD/PDEase domain llmg_1416 fb921857fc4bd5c08b6d4b71dbf72186 146 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 121 1.3E-24 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain llmg_1416 fb921857fc4bd5c08b6d4b71dbf72186 146 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 76 111 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 llmg_1416 fb921857fc4bd5c08b6d4b71dbf72186 146 Gene3D G3DSA:3.40.140.10 6 146 3.4E-40 T 14-10-2018 llmg_1416 fb921857fc4bd5c08b6d4b71dbf72186 146 SUPERFAMILY SSF53927 10 127 1.57E-34 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 llmg_1416 fb921857fc4bd5c08b6d4b71dbf72186 146 PIRSF PIRSF006019 1 146 7.1E-50 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 PIRSF PIRSF000538 1 492 2.7E-132 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 354 374 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 Gene3D G3DSA:3.30.420.40 248 502 8.2E-88 T 14-10-2018 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 246 8.7E-60 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 255 439 5.1E-30 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 SUPERFAMILY SSF53067 3 248 1.15E-61 T 14-10-2018 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 Gene3D G3DSA:3.30.420.40 1 247 1.6E-74 T 14-10-2018 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 3 497 1.6E-272 T 14-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 llmg_2468 b8eca56aa6fa5c837f90d0bb98db692c 502 SUPERFAMILY SSF53067 249 485 8.03E-63 T 14-10-2018 llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 Gene3D G3DSA:3.40.640.10 14 261 3.8E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 2 363 1.2E-152 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 Pfam PF00266 Aminotransferase class-V 2 351 5.0E-45 T 14-10-2018 IPR000192 Aminotransferase class V domain llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 364 47.242 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 PIRSF PIRSF000525 1 365 1.7E-145 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 SUPERFAMILY SSF53383 1 363 3.62E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0565 9a7e2016a3f13ae9c8c0c5ca2895192a 365 Gene3D G3DSA:3.90.1150.10 262 365 3.4E-37 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0782 9b79ba5c6c6d2ebac9bbddeefa8e253d 229 SUPERFAMILY SSF51569 3 224 6.96E-59 T 14-10-2018 llmg_0782 9b79ba5c6c6d2ebac9bbddeefa8e253d 229 Gene3D G3DSA:3.20.20.70 2 229 2.8E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0782 9b79ba5c6c6d2ebac9bbddeefa8e253d 229 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 5 220 1.2E-47 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 llmg_0782 9b79ba5c6c6d2ebac9bbddeefa8e253d 229 Pfam PF01487 Type I 3-dehydroquinase 8 221 1.1E-51 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 llmg_0782 9b79ba5c6c6d2ebac9bbddeefa8e253d 229 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 5 224 37.931 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 Pfam PF01479 S4 domain 87 130 5.4E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 SMART SM00363 87 145 1.1E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 152 319 1.9E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 SUPERFAMILY SSF55120 147 323 4.48E-40 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 Gene3D G3DSA:3.30.70.580 149 323 5.3E-54 T 14-10-2018 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 Pfam PF00849 RNA pseudouridylate synthase 148 288 1.1E-19 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 Gene3D G3DSA:3.10.290.10 85 148 6.4E-19 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 186 200 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 SUPERFAMILY SSF55174 72 189 3.53E-17 T 14-10-2018 llmg_2518 aea09230cf9560ae4de2ad2b5e6eb5ce 328 Gene3D G3DSA:3.30.70.1560 215 305 5.3E-54 T 14-10-2018 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 Gene3D G3DSA:3.40.50.300 1 214 3.9E-73 T 14-10-2018 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 Hamap MF_00235 Adenylate kinase [adk]. 1 215 50.966 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 PRINTS PR00094 Adenylate kinase signature 179 193 2.0E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 PRINTS PR00094 Adenylate kinase signature 162 177 2.0E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 PRINTS PR00094 Adenylate kinase signature 82 98 2.0E-30 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 Pfam PF00406 Adenylate kinase 5 191 9.6E-58 T 14-10-2018 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 Pfam PF05191 Adenylate kinase, active site lid 128 164 2.8E-15 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 214 2.6E-77 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 SUPERFAMILY SSF52540 1 214 4.37E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2359 98801deaa4027e53f0afc6c47389cab7 215 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 10 722 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 SUPERFAMILY SSF51998 169 704 7.94E-172 T 14-10-2018 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 Gene3D G3DSA:3.20.70.20 154 703 8.2E-183 T 14-10-2018 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 95 165 5.9E-12 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 560 582 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 Pfam PF08343 Ribonucleotide reductase N-terminal 11 91 4.5E-24 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 Pfam PF02867 Ribonucleotide reductase, barrel domain 170 701 2.1E-143 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 6.8E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 460 482 6.8E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 488 511 6.8E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 571 598 6.8E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 PRINTS PR01183 Ribonucleotide reductase large chain signature 245 264 6.8E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 Gene3D G3DSA:1.10.1650.20 288 340 8.2E-183 T 14-10-2018 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 96 704 1.5E-156 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_1543 3265996260cee5bd460cc09f2be9f80f 722 SUPERFAMILY SSF48168 22 168 1.09E-38 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 SUPERFAMILY SSF56655 4 252 6.94E-53 T 14-10-2018 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 Gene3D G3DSA:3.40.190.80 142 253 3.0E-17 T 14-10-2018 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 37 57 3.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 59 75 3.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 PRINTS PR00377 Inositol monophosphatase superfamily signature 82 98 3.5E-9 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 Gene3D G3DSA:3.30.540.10 3 141 2.8E-31 T 14-10-2018 llmg_0516 d5f039be6be41b78ad0b2cbe5e9debd2 253 Pfam PF00459 Inositol monophosphatase family 6 231 1.5E-39 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 llmg_1956 8ba668f807de1850b473f3dd4c68511c 453 Pfam PF12698 ABC-2 family transporter protein 22 376 4.0E-34 T 14-10-2018 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 Hamap MF_00323 Ferrochelatase [hemH]. 3 313 35.503 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 Pfam PF00762 Ferrochelatase 4 311 3.2E-96 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 TIGRFAM TIGR00109 hemH: ferrochelatase 3 313 7.7E-81 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 SUPERFAMILY SSF53800 3 311 3.27E-89 T 14-10-2018 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 Gene3D G3DSA:3.40.50.1400 156 294 3.0E-83 T 14-10-2018 llmg_0934 905ec69d54df098049ce3b90feb21e6e 318 Gene3D G3DSA:3.40.50.1400 4 311 3.0E-83 T 14-10-2018 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 SUPERFAMILY SSF52540 5 232 2.41E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 SUPERFAMILY SSF52540 309 507 3.0E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 Gene3D G3DSA:3.40.50.300 2 286 9.1E-59 T 14-10-2018 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 Pfam PF00005 ABC transporter 20 190 9.8E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 Pfam PF00005 ABC transporter 341 468 8.6E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 SMART SM00382 28 234 1.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 SMART SM00382 348 517 2.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 Pfam PF12848 ABC transporter 230 314 1.8E-14 T 14-10-2018 IPR032781 ABC-transporter extension domain llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0106 0dacb11cd67bcf3ac0f29a11e87bd249 517 Gene3D G3DSA:3.40.50.300 287 514 9.4E-42 T 14-10-2018 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 302 381 1.3E-9 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Gene3D G3DSA:3.40.50.720 223 389 2.1E-61 T 14-10-2018 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 171 3.0E-32 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 SUPERFAMILY SSF52413 284 389 5.62E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 380 1.2E-99 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Gene3D G3DSA:3.40.50.720 1 194 3.9E-58 T 14-10-2018 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 SUPERFAMILY SSF51735 3 195 2.51E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 SMART SM00984 301 388 7.0E-14 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 PIRSF PIRSF500134 2 388 1.9E-113 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Gene3D G3DSA:1.20.5.100 195 222 5.6E-20 T 14-10-2018 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 193 282 4.8E-25 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 PIRSF PIRSF000124 2 389 2.5E-127 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 llmg_1616 44d9b2f2ed992574f504accb22d79fd8 389 SUPERFAMILY SSF48179 193 288 2.72E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_2389 b7d67815395ebf3bf55b97d84145d5b3 64 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 2 54 4.1E-12 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 llmg_2389 b7d67815395ebf3bf55b97d84145d5b3 64 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 1 54 4.3E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 llmg_2389 b7d67815395ebf3bf55b97d84145d5b3 64 Gene3D G3DSA:1.20.5.1030 1 54 1.7E-8 T 14-10-2018 IPR038379 SecE superfamily llmg_0175 74abfdab58ba004e4fb165235817feb6 486 Gene3D G3DSA:3.90.1300.10 1 483 3.3E-187 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0175 74abfdab58ba004e4fb165235817feb6 486 ProSitePatterns PS00571 Amidases signature. 150 181 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 llmg_0175 74abfdab58ba004e4fb165235817feb6 486 Pfam PF01425 Amidase 24 463 1.5E-146 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0175 74abfdab58ba004e4fb165235817feb6 486 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 88.844 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0175 74abfdab58ba004e4fb165235817feb6 486 SUPERFAMILY SSF75304 1 481 2.75E-153 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_0175 74abfdab58ba004e4fb165235817feb6 486 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 475 1.2E-185 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 SMART SM00382 165 350 5.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 23 95 2.3E-22 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 357 366 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Gene3D G3DSA:3.40.50.300 99 367 2.7E-113 T 14-10-2018 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Gene3D G3DSA:2.40.10.170 19 97 6.5E-28 T 14-10-2018 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Hamap MF_01347 ATP synthase subunit beta [atpB]. 18 484 56.394 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 SUPERFAMILY SSF47917 369 484 2.15E-49 T 14-10-2018 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 20 484 1.2E-248 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 153 366 2.6E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 SUPERFAMILY SSF52540 99 370 3.07E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1946 f9ef865174eec24b1d7f138b640de015 486 Gene3D G3DSA:1.10.1140.10 369 485 1.9E-52 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_1946 f9ef865174eec24b1d7f138b640de015 486 SUPERFAMILY SSF50615 20 96 8.63E-23 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 llmg_0075 e6118fb61217a8b69556657531d84db8 333 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 8 319 6.6E-93 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 llmg_0075 e6118fb61217a8b69556657531d84db8 333 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 242 325 5.1E-23 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 llmg_0075 e6118fb61217a8b69556657531d84db8 333 SUPERFAMILY SSF82649 241 326 2.62E-22 T 14-10-2018 llmg_0075 e6118fb61217a8b69556657531d84db8 333 Gene3D G3DSA:3.30.390.50 241 327 9.4E-24 T 14-10-2018 llmg_0075 e6118fb61217a8b69556657531d84db8 333 Gene3D G3DSA:3.30.930.10 1 240 1.1E-75 T 14-10-2018 llmg_0075 e6118fb61217a8b69556657531d84db8 333 Pfam PF03099 Biotin/lipoate A/B protein ligase family 46 154 2.8E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 llmg_0075 e6118fb61217a8b69556657531d84db8 333 SUPERFAMILY SSF55681 1 240 6.75E-76 T 14-10-2018 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 94 5.5E-21 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 SUPERFAMILY SSF48179 158 262 9.35E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 218 240 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 158 262 1.9E-33 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 SUPERFAMILY SSF51735 3 156 7.25E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 Gene3D G3DSA:3.40.50.720 1 160 3.3E-47 T 14-10-2018 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 PIRSF PIRSF000193 1 263 1.8E-74 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 Gene3D G3DSA:1.10.3730.10 161 262 8.3E-35 T 14-10-2018 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 262 25.721 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 llmg_2077 67e539ce874aaa84fbf1a14ff79b9291 263 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 262 5.0E-89 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 302 4.6E-108 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 Gene3D G3DSA:3.40.1190.20 1 305 6.4E-94 T 14-10-2018 IPR029056 Ribokinase-like llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 244 257 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 PIRSF PIRSF000535 1 304 5.7E-80 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 SUPERFAMILY SSF53613 1 282 1.12E-62 T 14-10-2018 IPR029056 Ribokinase-like llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 Pfam PF00294 pfkB family carbohydrate kinase 17 277 2.1E-45 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB llmg_1569 0971fcca60f0565e92f30b5d96db52c3 305 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 1.2E-105 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 llmg_2475 f263aa6713a4e3a2abe2b7c551a18f65 97 Gene3D G3DSA:3.30.70.60 1 97 9.8E-31 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 llmg_2475 f263aa6713a4e3a2abe2b7c551a18f65 97 SUPERFAMILY SSF54995 1 96 2.22E-29 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2475 f263aa6713a4e3a2abe2b7c551a18f65 97 Pfam PF01250 Ribosomal protein S6 3 94 7.6E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2475 f263aa6713a4e3a2abe2b7c551a18f65 97 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 97 21.908 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2475 f263aa6713a4e3a2abe2b7c551a18f65 97 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 96 5.3E-27 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Pfam PF08529 NusA N-terminal domain 4 123 2.8E-37 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Gene3D G3DSA:3.30.300.20 198 276 7.1E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 SMART SM00316 133 199 2.5E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Pfam PF00575 S1 RNA binding domain 134 185 3.9E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 340 2.9E-131 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Gene3D G3DSA:3.30.1480.10 1 124 2.5E-41 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 SUPERFAMILY SSF69705 1 126 4.32E-41 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 SUPERFAMILY SSF54814 199 277 5.69E-27 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 SUPERFAMILY SSF50249 133 198 8.95E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 SUPERFAMILY SSF54814 278 340 2.83E-10 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Pfam PF13184 NusA-like KH domain 229 297 2.3E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 376 28.115 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Gene3D G3DSA:2.40.50.140 136 197 5.9E-20 T 14-10-2018 llmg_1796 56919bc778fb71ba37db31b5d1123dbd 382 Gene3D G3DSA:3.30.300.20 277 382 1.2E-23 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 PIRSF PIRSF002599 1 66 5.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 PRINTS PR00050 Cold shock protein signature 39 57 2.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 PRINTS PR00050 Cold shock protein signature 24 33 2.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 PRINTS PR00050 Cold shock protein signature 4 19 2.2E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.8E-29 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 SUPERFAMILY SSF50249 1 64 2.81E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 SMART SM00357 3 66 6.8E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1846 f2a2299c5710b9eef2305319ae14c4b1 66 Gene3D G3DSA:2.40.50.140 1 65 1.3E-29 T 14-10-2018 llmg_2442 7f63e25d7136c19eebc29ebe04f63ee5 343 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 229 339 3.2E-10 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 llmg_2442 7f63e25d7136c19eebc29ebe04f63ee5 343 Gene3D G3DSA:2.30.42.10 130 227 2.5E-28 T 14-10-2018 llmg_2442 7f63e25d7136c19eebc29ebe04f63ee5 343 SUPERFAMILY SSF50156 107 194 2.35E-8 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 llmg_2442 7f63e25d7136c19eebc29ebe04f63ee5 343 Pfam PF13180 PDZ domain 134 197 8.7E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 llmg_2442 7f63e25d7136c19eebc29ebe04f63ee5 343 SUPERFAMILY SSF54211 169 341 3.79E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Pfam PF00958 GMP synthase C terminal domain 421 512 7.3E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 SUPERFAMILY SSF52402 188 406 2.43E-60 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 SUPERFAMILY SSF54810 393 513 3.53E-49 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Gene3D G3DSA:3.40.50.880 2 196 5.2E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 513 54.305 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Pfam PF00117 Glutamine amidotransferase class-I 11 191 5.1E-41 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Pfam PF02540 NAD synthase 208 252 4.9E-8 T 14-10-2018 IPR022310 NAD/GMP synthase llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 9.5E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 80 91 9.5E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00097 Anthranilate synthase component II signature 53 62 9.5E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Gene3D G3DSA:3.30.300.10 394 513 2.5E-49 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 6.2E-76 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 Gene3D G3DSA:3.40.50.620 200 393 2.3E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 7.7E-8 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 7.7E-8 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 7.7E-8 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 1.1E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 1.1E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 1.1E-6 T 14-10-2018 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 1.1E-150 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 llmg_1008 12b674366286c93ca983c47986b3e4f7 513 SUPERFAMILY SSF52317 7 228 1.03E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 41 310 1.1E-72 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 Gene3D G3DSA:3.40.50.1980 185 315 7.6E-41 T 14-10-2018 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 200 221 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 38 56 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 279 298 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 253 271 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 69 82 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00690 Adhesin family signature 82 99 1.5E-56 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 SUPERFAMILY SSF53807 37 314 6.87E-85 T 14-10-2018 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 Gene3D G3DSA:3.40.50.1980 23 184 1.8E-55 T 14-10-2018 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 63 81 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 226 244 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 200 217 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 38 59 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 82 101 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 249 266 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 271 289 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 292 310 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1138 e2e8c0bb39a46be29f37042c1ef10090 315 PRINTS PR00691 Adhesin B signature 142 161 3.8E-95 T 14-10-2018 IPR006129 Adhesin B GO:0007155 llmg_1587 972fc7787b4c4cc2b7cc71e64d2890c3 82 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 6 79 1.7E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 llmg_1587 972fc7787b4c4cc2b7cc71e64d2890c3 82 PRINTS PR01651 Protein-export SecG membrane protein signature 60 82 5.4E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 llmg_1587 972fc7787b4c4cc2b7cc71e64d2890c3 82 PRINTS PR01651 Protein-export SecG membrane protein signature 27 41 5.4E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 llmg_1587 972fc7787b4c4cc2b7cc71e64d2890c3 82 PRINTS PR01651 Protein-export SecG membrane protein signature 7 27 5.4E-6 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 llmg_1587 972fc7787b4c4cc2b7cc71e64d2890c3 82 Pfam PF03840 Preprotein translocase SecG subunit 8 78 1.5E-16 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 llmg_2472 bf528fca7c18b1032e8b8a8d70427b91 261 Gene3D G3DSA:3.60.21.10 36 234 2.9E-24 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_2472 bf528fca7c18b1032e8b8a8d70427b91 261 Pfam PF00149 Calcineurin-like phosphoesterase 38 203 4.9E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_2472 bf528fca7c18b1032e8b8a8d70427b91 261 SUPERFAMILY SSF56300 38 259 9.5E-33 T 14-10-2018 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 Gene3D G3DSA:2.40.50.100 251 374 4.6E-34 T 14-10-2018 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 SUPERFAMILY SSF52540 4 256 1.32E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 SMART SM00382 30 213 7.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 Gene3D G3DSA:3.40.50.300 1 250 6.6E-71 T 14-10-2018 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 Gene3D G3DSA:2.40.50.140 315 360 4.6E-34 T 14-10-2018 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 SUPERFAMILY SSF50331 248 376 1.82E-27 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 Pfam PF00005 ABC transporter 22 163 5.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0446 73e37253f3791e8a4e16720dbf3f9b43 378 Pfam PF08402 TOBE domain 293 368 7.5E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 22 1.2E-29 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 159 187 1.2E-29 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 234 261 1.2E-29 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 61 90 1.2E-29 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 Gene3D G3DSA:1.10.1040.10 170 300 3.1E-50 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 Gene3D G3DSA:3.40.50.720 1 169 1.2E-44 T 14-10-2018 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 SMART SM01350 170 297 2.0E-6 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 SUPERFAMILY SSF51735 1 159 3.76E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 170 280 1.3E-24 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 SUPERFAMILY SSF48179 168 299 1.42E-42 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 301 7.7E-121 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 llmg_2469 095ad19199831b4c27bfd3bba09b55c5 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 157 5.0E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 llmg_1969 e1f0ee9e98b6e11977c79b5941306c7f 470 Pfam PF01458 Uncharacterized protein family (UPF0051) 216 441 1.4E-74 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 llmg_1969 e1f0ee9e98b6e11977c79b5941306c7f 470 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 15 461 8.3E-221 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 llmg_1969 e1f0ee9e98b6e11977c79b5941306c7f 470 SUPERFAMILY SSF101960 37 467 1.83E-137 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily llmg_0540 a26883be90bc1f70da4f799b3fc4bf19 320 PRINTS PR00701 60kDa inner membrane protein signature 223 246 4.1E-7 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0540 a26883be90bc1f70da4f799b3fc4bf19 320 PRINTS PR00701 60kDa inner membrane protein signature 140 163 4.1E-7 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0540 a26883be90bc1f70da4f799b3fc4bf19 320 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 5 260 27.958 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 llmg_0540 a26883be90bc1f70da4f799b3fc4bf19 320 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 68 256 5.7E-43 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0540 a26883be90bc1f70da4f799b3fc4bf19 320 Pfam PF02096 60Kd inner membrane protein 68 255 3.2E-37 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 Gene3D G3DSA:3.20.20.105 1 378 4.9E-164 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 SUPERFAMILY SSF51713 7 372 1.57E-153 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 376 1.2E-169 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 Pfam PF01702 Queuine tRNA-ribosyltransferase 135 368 6.6E-89 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 371 55.766 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0164 16d15c735e36bf7bc1b5cd159fe5c49e 382 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 375 3.4E-163 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 SUPERFAMILY SSF46689 5 60 4.73E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 SUPERFAMILY SSF48498 72 206 5.78E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily llmg_0996 b16b01c09e4b0e4789086da5884610af 208 PRINTS PR00400 Tetracycline repressor protein signature 22 45 1.8E-5 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 PRINTS PR00400 Tetracycline repressor protein signature 187 201 1.8E-5 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 56 4.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 2.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 2.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 Gene3D G3DSA:1.10.10.60 3 63 1.1E-15 T 14-10-2018 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 Gene3D G3DSA:1.10.357.10 70 207 5.1E-22 T 14-10-2018 llmg_0996 b16b01c09e4b0e4789086da5884610af 208 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 66 204 1.0E-35 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 llmg_2173 0b6c84325d08ffedbc5a6a68b4bbaaab 96 Gene3D G3DSA:1.10.10.60 7 87 2.6E-9 T 14-10-2018 llmg_2173 0b6c84325d08ffedbc5a6a68b4bbaaab 96 SUPERFAMILY SSF46689 1 93 1.52E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2173 0b6c84325d08ffedbc5a6a68b4bbaaab 96 Pfam PF01527 Transposase 2 75 2.8E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0121 0b6c84325d08ffedbc5a6a68b4bbaaab 96 Gene3D G3DSA:1.10.10.60 7 87 2.6E-9 T 14-10-2018 llmg_0121 0b6c84325d08ffedbc5a6a68b4bbaaab 96 SUPERFAMILY SSF46689 1 93 1.52E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0121 0b6c84325d08ffedbc5a6a68b4bbaaab 96 Pfam PF01527 Transposase 2 75 2.8E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1373 8e9ed3693924939393473d3d2a3371ef 118 Pfam PF05713 Bacterial mobilisation protein (MobC) 64 102 3.9E-9 T 14-10-2018 IPR008687 Bacterial mobilisation llmg_1347 2813eb4acca5103e5ae637e23912e53c 94 SMART SM00530 35 90 6.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1347 2813eb4acca5103e5ae637e23912e53c 94 Gene3D G3DSA:1.10.260.40 18 92 3.0E-15 T 14-10-2018 llmg_1347 2813eb4acca5103e5ae637e23912e53c 94 SUPERFAMILY SSF47413 33 91 3.38E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1347 2813eb4acca5103e5ae637e23912e53c 94 Pfam PF01381 Helix-turn-helix 36 88 1.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1359 2813eb4acca5103e5ae637e23912e53c 94 SMART SM00530 35 90 6.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1359 2813eb4acca5103e5ae637e23912e53c 94 Gene3D G3DSA:1.10.260.40 18 92 3.0E-15 T 14-10-2018 llmg_1359 2813eb4acca5103e5ae637e23912e53c 94 SUPERFAMILY SSF47413 33 91 3.38E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1359 2813eb4acca5103e5ae637e23912e53c 94 Pfam PF01381 Helix-turn-helix 36 88 1.0E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0493 970ab903a82f3597b2653c832213c93e 279 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 52 264 6.1E-26 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain llmg_0493 970ab903a82f3597b2653c832213c93e 279 SUPERFAMILY SSF52266 46 271 4.09E-36 T 14-10-2018 llmg_0493 970ab903a82f3597b2653c832213c93e 279 Gene3D G3DSA:3.40.50.1110 31 279 5.7E-37 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_0174 e92d72becf12f734ad18d793d0a5375b 101 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.6E-27 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 llmg_0174 e92d72becf12f734ad18d793d0a5375b 101 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 24.061 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 llmg_0174 e92d72becf12f734ad18d793d0a5375b 101 SUPERFAMILY SSF141000 3 93 9.02E-28 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 llmg_0174 e92d72becf12f734ad18d793d0a5375b 101 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 1.2E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 llmg_0174 e92d72becf12f734ad18d793d0a5375b 101 Gene3D G3DSA:1.10.20.60 1 94 1.3E-26 T 14-10-2018 llmg_2187 9af7b40e1b46e3bfe8fe31d58f817edc 432 Gene3D G3DSA:1.20.5.1230 26 196 1.4E-8 T 14-10-2018 llmg_2187 9af7b40e1b46e3bfe8fe31d58f817edc 432 Pfam PF02646 RmuC family 137 425 6.5E-69 T 14-10-2018 IPR003798 DNA recombination RmuC llmg_2187 9af7b40e1b46e3bfe8fe31d58f817edc 432 SUPERFAMILY SSF58113 41 175 6.54E-7 T 14-10-2018 llmg_0203 b98db2c7d16d7079fa9b6742ef14d9fb 122 Pfam PF03780 Asp23 family, cell envelope-related function 11 118 1.5E-31 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 168 180 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 SUPERFAMILY SSF51412 5 318 3.27E-89 T 14-10-2018 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 316 1.2E-67 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 PIRSF PIRSF036500 3 329 2.0E-191 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 Hamap MF_01511 GMP reductase [guaC]. 5 328 62.142 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 207 227 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 Gene3D G3DSA:3.20.20.70 1 329 4.0E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 SMART SM01240 6 329 1.0E-107 T 14-10-2018 llmg_1412 4220f1ab746326d8f4428ec5e00e415e 329 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 7 327 4.5E-191 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 SMART SM00525 191 211 0.01 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Gene3D G3DSA:1.10.1670.10 16 208 1.5E-76 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 SMART SM00478 39 190 2.6E-56 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 173 8.7E-25 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 TIGRFAM TIGR01083 nth: endonuclease III 5 199 7.4E-78 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 SUPERFAMILY SSF48150 1 213 3.3E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Pfam PF00633 Helix-hairpin-helix motif 109 131 9.0E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 6.7E-6 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Hamap MF_00942 Endonuclease III [nth]. 1 214 38.859 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 Gene3D G3DSA:1.10.340.30 22 136 1.5E-76 T 14-10-2018 llmg_1501 43411f0c1dddba994bb4c1912a77929c 218 PIRSF PIRSF001435 1 217 5.5E-53 T 14-10-2018 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 Pfam PF00512 His Kinase A (phospho-acceptor) domain 223 285 4.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.8E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 434 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 Gene3D G3DSA:3.30.565.10 290 439 2.8E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 SMART SM00388 221 288 1.0E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 Gene3D G3DSA:1.10.287.130 174 288 1.7E-25 T 14-10-2018 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 SUPERFAMILY SSF47384 204 285 6.28E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 SMART SM00387 328 440 5.5E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1518 26394543e768e1b8cf5ce2467a1860bf 441 SUPERFAMILY SSF55874 278 436 2.23E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1179 af69f97bc0d4ae87bc98d5242e5093ea 466 Gene3D G3DSA:3.90.1150.160 361 464 5.2E-27 T 14-10-2018 llmg_1179 af69f97bc0d4ae87bc98d5242e5093ea 466 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 17 446 2.2E-202 T 14-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 llmg_1179 af69f97bc0d4ae87bc98d5242e5093ea 466 Gene3D G3DSA:3.40.640.10 66 360 5.4E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1179 af69f97bc0d4ae87bc98d5242e5093ea 466 SUPERFAMILY SSF53383 5 446 7.13E-132 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1179 af69f97bc0d4ae87bc98d5242e5093ea 466 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 54 381 9.9E-76 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 112 1.8E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 Pfam PF01245 Ribosomal protein L19 2 112 9.6E-53 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 PRINTS PR00061 Ribosomal protein L19 signature 87 112 3.3E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 PRINTS PR00061 Ribosomal protein L19 signature 3 32 3.3E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 PRINTS PR00061 Ribosomal protein L19 signature 33 62 3.3E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 PIRSF PIRSF002191 1 114 6.0E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 31.78 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 SUPERFAMILY SSF50104 1 113 2.61E-48 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1671 5265c4ef903153ff499e1c7fad0c25cb 114 Gene3D G3DSA:2.30.30.790 9 113 1.7E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 Gene3D G3DSA:3.30.70.120 1 113 2.6E-41 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 PRINTS PR00340 P-II protein signature 53 76 1.1E-23 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 PRINTS PR00340 P-II protein signature 2 17 1.1E-23 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 PRINTS PR00340 P-II protein signature 84 104 1.1E-23 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 SUPERFAMILY SSF54913 1 113 9.53E-36 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 84 97 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 2.2E-36 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 llmg_0911 1c0d485c10481a1eb513d58ad48f63f5 113 SMART SM00938 4 106 5.7E-46 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 llmg_1513 52b0349e50028431092f2d4d62d879e1 130 Pfam PF00462 Glutaredoxin 2 46 1.2E-6 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 llmg_1513 52b0349e50028431092f2d4d62d879e1 130 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 6.3E-34 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_1513 52b0349e50028431092f2d4d62d879e1 130 Gene3D G3DSA:3.40.30.10 1 120 9.8E-44 T 14-10-2018 llmg_1513 52b0349e50028431092f2d4d62d879e1 130 SUPERFAMILY SSF52833 1 126 1.3E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1513 52b0349e50028431092f2d4d62d879e1 130 Pfam PF03960 ArsC family 56 113 2.4E-19 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_1288 683e92c5a7ec97db61c87d632bfb869f 261 SMART SM00481 4 84 4.3E-9 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal llmg_1288 683e92c5a7ec97db61c87d632bfb869f 261 SUPERFAMILY SSF89550 3 259 3.66E-37 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 llmg_1288 683e92c5a7ec97db61c87d632bfb869f 261 Gene3D G3DSA:3.20.20.140 1 261 6.6E-71 T 14-10-2018 llmg_1288 683e92c5a7ec97db61c87d632bfb869f 261 Pfam PF02811 PHP domain 5 194 4.9E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 llmg_1288 683e92c5a7ec97db61c87d632bfb869f 261 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 241 1.1E-68 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 llmg_2194 ee57e42e149fe50a1936cdd093797e78 357 Pfam PF06725 3D domain 297 356 1.7E-18 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 llmg_2194 ee57e42e149fe50a1936cdd093797e78 357 SUPERFAMILY SSF50685 297 345 8.72E-5 T 14-10-2018 IPR036908 RlpA-like domain superfamily llmg_1700 8f54fadfcdea6fef085f476590c496c9 305 Pfam PF00005 ABC transporter 17 163 4.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1700 8f54fadfcdea6fef085f476590c496c9 305 SMART SM00382 26 213 2.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1700 8f54fadfcdea6fef085f476590c496c9 305 Gene3D G3DSA:3.40.50.300 1 291 4.1E-76 T 14-10-2018 llmg_1700 8f54fadfcdea6fef085f476590c496c9 305 SUPERFAMILY SSF52540 1 243 1.36E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1700 8f54fadfcdea6fef085f476590c496c9 305 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0488 8a1d74ddc4b88a2c05d8d528f205aad1 421 SUPERFAMILY SSF53850 34 413 2.27E-62 T 14-10-2018 llmg_0488 8a1d74ddc4b88a2c05d8d528f205aad1 421 Pfam PF13416 Bacterial extracellular solute-binding protein 55 361 4.6E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_0488 8a1d74ddc4b88a2c05d8d528f205aad1 421 Gene3D G3DSA:3.40.190.10 21 419 1.5E-61 T 14-10-2018 llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 65 133 4.5E-24 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 SUPERFAMILY SSF47979 65 139 1.29E-21 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 62 2.4E-16 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 Gene3D G3DSA:1.10.10.10 1 134 1.4E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 SMART SM00529 26 125 2.2E-31 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 llmg_1224 2c1423abd73501cdb28a7b2b0484183b 217 SUPERFAMILY SSF46785 5 64 7.14E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 Pfam PF01842 ACT domain 154 211 1.8E-11 T 14-10-2018 IPR002912 ACT domain llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 Gene3D G3DSA:3.30.1330.90 16 140 8.3E-21 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 5 206 2.4E-66 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 Gene3D G3DSA:3.30.70.260 152 222 1.2E-16 T 14-10-2018 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 SUPERFAMILY SSF55021 141 219 3.77E-17 T 14-10-2018 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 Pfam PF03315 Serine dehydratase beta chain 8 135 8.3E-13 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 PIRSF PIRSF036692 4 223 4.5E-105 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 llmg_1733 f36e5d627cacfc47d9fcc24512b17760 223 SUPERFAMILY SSF143548 22 141 1.83E-29 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 177 235 5.2E-18 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Hamap MF_01263 CCA-adding enzyme [cca]. 7 398 41.425 T 14-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Gene3D G3DSA:1.10.110.30 153 247 6.2E-27 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 SUPERFAMILY SSF81891 149 398 9.68E-55 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 SUPERFAMILY SSF81301 12 147 2.86E-41 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Gene3D G3DSA:1.20.58.560 251 340 1.2E-10 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Gene3D G3DSA:1.10.246.80 342 401 5.4E-12 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 251 393 7.8E-40 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Gene3D G3DSA:3.30.460.10 7 152 2.4E-49 T 14-10-2018 llmg_0942 6130b23162cbdb1d501f5532542223c9 402 Pfam PF01743 Poly A polymerase head domain 27 149 2.1E-35 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 llmg_2165 763b2924256267ca62ac89da126d2afc 538 SUPERFAMILY SSF54001 414 521 8.53E-17 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_2165 763b2924256267ca62ac89da126d2afc 538 Pfam PF05257 CHAP domain 425 512 3.2E-14 T 14-10-2018 IPR007921 CHAP domain llmg_2165 763b2924256267ca62ac89da126d2afc 538 Gene3D G3DSA:1.10.530.10 237 385 1.2E-43 T 14-10-2018 llmg_2165 763b2924256267ca62ac89da126d2afc 538 Gene3D G3DSA:4.10.80.30 288 313 1.2E-43 T 14-10-2018 llmg_2165 763b2924256267ca62ac89da126d2afc 538 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 248 381 3.4E-17 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_2165 763b2924256267ca62ac89da126d2afc 538 SMART SM00047 228 385 6.0E-29 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_2165 763b2924256267ca62ac89da126d2afc 538 PRINTS PR01002 Flagellar protein FlgJ signature 362 380 8.0E-5 T 14-10-2018 llmg_2165 763b2924256267ca62ac89da126d2afc 538 PRINTS PR01002 Flagellar protein FlgJ signature 256 274 8.0E-5 T 14-10-2018 llmg_2165 763b2924256267ca62ac89da126d2afc 538 Gene3D G3DSA:3.90.1720.10 421 536 1.1E-27 T 14-10-2018 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Gene3D G3DSA:3.40.50.1220 184 336 1.6E-39 T 14-10-2018 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 1.4E-45 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 TIGRFAM TIGR02720 pyruv_oxi_spxB: pyruvate oxidase 6 575 1.1E-238 T 14-10-2018 IPR014092 Pyruvate oxidase GO:0047112|GO:0055114 KEGG: 00620+1.2.3.3 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 323 1.8E-29 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 SUPERFAMILY SSF52518 3 175 6.6E-46 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 420 439 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Gene3D G3DSA:1.10.10.940 540 575 6.4E-8 T 14-10-2018 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 SUPERFAMILY SSF52518 360 570 1.22E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 7.8E-34 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 SUPERFAMILY SSF52467 186 352 4.81E-39 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Gene3D G3DSA:3.40.50.970 339 539 1.3E-44 T 14-10-2018 llmg_2321 71883903248ce82bdbbadc99c2310cd0 575 Gene3D G3DSA:3.40.50.970 1 183 1.3E-60 T 14-10-2018 llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 Gene3D G3DSA:3.30.70.330 59 144 1.3E-24 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 SMART SM00363 159 221 7.1E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 SUPERFAMILY SSF55174 15 229 2.14E-25 T 14-10-2018 llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 Gene3D G3DSA:3.30.1370.160 1 57 1.3E-14 T 14-10-2018 llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 Gene3D G3DSA:3.10.290.10 156 211 2.4E-7 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_2056 28c03109bdd54ab5c472d553e1a09726 239 Pfam PF01479 S4 domain 160 205 6.4E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0510 9ae98dbd915ba356e10054d089b9ff05 210 SMART SM00849 12 193 1.6E-39 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0510 9ae98dbd915ba356e10054d089b9ff05 210 Pfam PF00753 Metallo-beta-lactamase superfamily 12 193 1.4E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0510 9ae98dbd915ba356e10054d089b9ff05 210 Gene3D G3DSA:3.60.15.10 1 210 1.0E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0510 9ae98dbd915ba356e10054d089b9ff05 210 SUPERFAMILY SSF56281 14 210 9.96E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 SUPERFAMILY SSF53901 214 406 3.52E-59 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 SUPERFAMILY SSF53901 3 251 4.07E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 3 404 2.7E-163 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 SMART SM00825 Beta-ketoacyl synthase 5 397 3.6E-11 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 361 9.8E-26 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 PIRSF PIRSF000447 1 408 1.8E-151 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 246 1.5E-53 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 Gene3D G3DSA:3.40.47.10 5 259 1.4E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_1783 c65e28b5dceb69dbfb1c65eed8a29510 409 Gene3D G3DSA:3.40.47.10 260 406 1.7E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_1454 9231317604677dbd7b80450f8bfe3be0 315 SUPERFAMILY SSF53067 1 313 3.11E-55 T 14-10-2018 llmg_1454 9231317604677dbd7b80450f8bfe3be0 315 Pfam PF00480 ROK family 4 308 2.0E-48 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1454 9231317604677dbd7b80450f8bfe3be0 315 Gene3D G3DSA:3.30.420.40 122 294 1.9E-72 T 14-10-2018 llmg_1454 9231317604677dbd7b80450f8bfe3be0 315 Gene3D G3DSA:3.30.420.40 5 305 1.9E-72 T 14-10-2018 llmg_0902 9c7c0d4928668e8d0e653519d02006d9 134 SMART SM00226 2 134 1.8E-42 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I llmg_0902 9c7c0d4928668e8d0e653519d02006d9 134 Gene3D G3DSA:3.40.50.2300 1 134 4.9E-45 T 14-10-2018 llmg_0902 9c7c0d4928668e8d0e653519d02006d9 134 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 131 8.3E-23 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I llmg_0902 9c7c0d4928668e8d0e653519d02006d9 134 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 4 131 1.2E-64 T 14-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 llmg_0902 9c7c0d4928668e8d0e653519d02006d9 134 SUPERFAMILY SSF52788 1 133 4.58E-40 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 361 367 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:3.40.1110.10 415 543 5.8E-78 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 744 757 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 289 308 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 272 288 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 863 884 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 393 406 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 764 780 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 712 723 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 813 834 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 PRINTS PR01836 Magnesium-transporting ATPase signature 694 709 1.7E-82 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 SUPERFAMILY SSF81665 34 906 9.94E-102 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:2.70.150.10 45 262 2.6E-85 T 14-10-2018 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 30 908 0.0 T 14-10-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:1.20.1110.10 681 894 5.8E-78 T 14-10-2018 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 SMART SM00831 28 102 1.1E-14 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Pfam PF00702 haloacid dehalogenase-like hydrolase 355 650 3.1E-18 T 14-10-2018 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:3.40.50.1000 356 368 2.6E-85 T 14-10-2018 IPR023214 HAD superfamily llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Pfam PF00690 Cation transporter/ATPase, N-terminus 34 97 4.9E-17 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 SUPERFAMILY SSF81653 157 260 3.92E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:3.40.50.1000 544 680 5.8E-78 T 14-10-2018 IPR023214 HAD superfamily llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Pfam PF00122 E1-E2 ATPase 149 338 1.9E-42 T 14-10-2018 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 244 377 5.0E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 118 219 5.4E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 602 725 3.4E-30 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 Gene3D G3DSA:1.20.1110.10 79 355 2.6E-85 T 14-10-2018 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 SUPERFAMILY SSF81660 327 539 7.85E-39 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_1223 1f04144295d5b295894ff35b65a4e8c8 910 SUPERFAMILY SSF56784 529 682 2.29E-35 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2396 4d47d439e1be387fef618b2e32aa3ab9 290 SUPERFAMILY SSF55120 82 280 1.92E-61 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2396 4d47d439e1be387fef618b2e32aa3ab9 290 Gene3D G3DSA:3.30.2350.10 81 290 1.7E-65 T 14-10-2018 llmg_2396 4d47d439e1be387fef618b2e32aa3ab9 290 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 41 281 3.2E-64 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2396 4d47d439e1be387fef618b2e32aa3ab9 290 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2396 4d47d439e1be387fef618b2e32aa3ab9 290 Pfam PF00849 RNA pseudouridylate synthase 89 233 3.6E-34 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1838 eae013ed468a95d55d2dbd30a0e50502 520 Gene3D G3DSA:3.40.190.10 160 512 2.1E-123 T 14-10-2018 llmg_1838 eae013ed468a95d55d2dbd30a0e50502 520 Gene3D G3DSA:3.40.190.10 61 422 2.1E-123 T 14-10-2018 llmg_1838 eae013ed468a95d55d2dbd30a0e50502 520 Pfam PF01547 Bacterial extracellular solute-binding protein 62 364 8.3E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_1838 eae013ed468a95d55d2dbd30a0e50502 520 SUPERFAMILY SSF53850 24 514 1.06E-76 T 14-10-2018 llmg_0708 4e2a34d15d5831c912b223e81bce3120 91 Pfam PF09862 Protein of unknown function (DUF2089) 2 83 6.8E-15 T 14-10-2018 IPR018658 Protein of unknown function DUF2089 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 163 1.5E-50 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 321 2.5E-52 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 Gene3D G3DSA:3.40.50.720 1 190 1.4E-57 T 14-10-2018 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PIRSF PIRSF000114 1 335 2.0E-103 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 191 212 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 Gene3D G3DSA:1.10.1040.10 192 339 2.3E-51 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 8 25 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 4.3E-39 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 SUPERFAMILY SSF48179 182 334 5.95E-54 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 4 325 36.249 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 llmg_1114 74d4d51e9fe30c16ef36ce5b8e43fe72 342 SUPERFAMILY SSF51735 5 182 8.9E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2364 ff152326cce7c1e365236d065665a2cf 168 Gene3D G3DSA:3.30.160.20 4 76 6.5E-34 T 14-10-2018 llmg_2364 ff152326cce7c1e365236d065665a2cf 168 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 12 166 2.8E-68 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 llmg_2364 ff152326cce7c1e365236d065665a2cf 168 Pfam PF03719 Ribosomal protein S5, C-terminal domain 90 160 2.6E-28 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 llmg_2364 ff152326cce7c1e365236d065665a2cf 168 Pfam PF00333 Ribosomal protein S5, N-terminal domain 14 78 5.9E-32 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 llmg_2364 ff152326cce7c1e365236d065665a2cf 168 SUPERFAMILY SSF54211 83 162 4.3E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2364 ff152326cce7c1e365236d065665a2cf 168 Gene3D G3DSA:3.30.230.10 77 168 7.2E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2364 ff152326cce7c1e365236d065665a2cf 168 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 166 36.26 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 llmg_2364 ff152326cce7c1e365236d065665a2cf 168 ProSitePatterns PS00585 Ribosomal protein S5 signature. 31 63 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site llmg_2364 ff152326cce7c1e365236d065665a2cf 168 SUPERFAMILY SSF54768 10 79 2.51E-25 T 14-10-2018 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 335 47.381 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 SUPERFAMILY SSF53784 1 302 8.63E-107 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 Gene3D G3DSA:3.40.50.450 3 287 2.9E-111 T 14-10-2018 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PIRSF PIRSF000532 1 317 2.6E-117 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 4.5E-85 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 Pfam PF00365 Phosphofructokinase 3 276 1.2E-105 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 Gene3D G3DSA:3.40.50.460 142 252 2.9E-111 T 14-10-2018 llmg_1118 1c183b0fa280f9dc25b4e88d234f10f6 340 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 1.6E-122 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 4.8E-19 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 SUPERFAMILY SSF55653 56 148 3.27E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 148 4.9E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 Gene3D G3DSA:3.10.430.100 60 150 1.1E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 SUPERFAMILY SSF55658 1 57 3.84E-15 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 2.0E-38 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 150 23.458 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1815 50b5311148efe4374bafc336a11f0b5d 150 Gene3D G3DSA:3.40.5.10 1 52 1.9E-20 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1527 c52b71547c7e2e74e25451b24d3b70ae 132 Pfam PF08279 HTH domain 5 57 3.4E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 llmg_1527 c52b71547c7e2e74e25451b24d3b70ae 132 Gene3D G3DSA:1.10.10.10 1 61 6.8E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1527 c52b71547c7e2e74e25451b24d3b70ae 132 SUPERFAMILY SSF46785 2 54 3.73E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Pfam PF01434 Peptidase family M41 424 631 3.8E-78 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Gene3D G3DSA:1.20.58.760 445 646 3.1E-65 T 14-10-2018 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 SMART SM00382 225 365 1.4E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 15 655 36.298 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 137 632 8.0E-221 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Gene3D G3DSA:3.40.50.300 180 362 1.2E-67 T 14-10-2018 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 229 361 1.6E-45 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Gene3D G3DSA:1.10.8.60 364 441 1.4E-28 T 14-10-2018 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 SUPERFAMILY SSF52540 188 432 5.8E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 SUPERFAMILY SSF140990 448 637 2.35E-62 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 ProSitePatterns PS00674 AAA-protein family signature. 333 351 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 llmg_0021 fa2a529387a5a9ace23d3c6e9619be1a 695 Pfam PF06480 FtsH Extracellular 16 129 7.7E-15 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 137 21.44 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 87 1.6E-24 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 25 93 2.0E-18 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 SUPERFAMILY SSF51344 5 89 2.62E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 Gene3D G3DSA:1.20.5.440 94 140 1.1E-12 T 14-10-2018 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 Gene3D G3DSA:2.60.15.10 4 93 1.5E-23 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 137 1.0E-25 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 llmg_1945 0bb98514c41795a49b5066979a877e6b 141 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 91 138 1.9E-14 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain llmg_0611 2d5a3a83c2d841798a75c5a5b4e173da 185 SUPERFAMILY SSF46689 58 159 8.96E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0611 2d5a3a83c2d841798a75c5a5b4e173da 185 SUPERFAMILY SSF46689 2 52 3.94E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0611 2d5a3a83c2d841798a75c5a5b4e173da 185 Pfam PF13518 Helix-turn-helix domain 9 50 5.4E-8 T 14-10-2018 llmg_1801 68db6dfffe15a8eac80feca801c0f27c 429 TIGRFAM TIGR01076 sortase_fam: sortase 113 243 4.9E-43 T 14-10-2018 IPR005754 Sortase family llmg_1801 68db6dfffe15a8eac80feca801c0f27c 429 Gene3D G3DSA:2.40.260.10 43 257 1.3E-54 T 14-10-2018 IPR023365 Sortase domain superfamily llmg_1801 68db6dfffe15a8eac80feca801c0f27c 429 SUPERFAMILY SSF63817 104 243 2.88E-39 T 14-10-2018 IPR023365 Sortase domain superfamily llmg_1801 68db6dfffe15a8eac80feca801c0f27c 429 Pfam PF04203 Sortase family 115 241 5.0E-22 T 14-10-2018 IPR005754 Sortase family llmg_1801 68db6dfffe15a8eac80feca801c0f27c 429 Pfam PF13151 Protein of unknown function (DUF3990) 288 400 1.6E-15 T 14-10-2018 IPR025051 Protein of unknown function DUF3990 llmg_1168 70e6a28484413a05dcb87554d63ce68a 208 Gene3D G3DSA:3.20.20.370 1 186 1.9E-52 T 14-10-2018 llmg_1168 70e6a28484413a05dcb87554d63ce68a 208 Pfam PF01522 Polysaccharide deacetylase 3 115 1.0E-23 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 llmg_1168 70e6a28484413a05dcb87554d63ce68a 208 SUPERFAMILY SSF88713 3 185 2.45E-46 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 llmg_1475 16f5c7459f012b76c22a811ec129fa85 80 SUPERFAMILY SSF158221 4 43 3.4E-12 T 14-10-2018 llmg_1475 16f5c7459f012b76c22a811ec129fa85 80 Hamap MF_01103 UPF0291 protein . 3 62 15.967 T 14-10-2018 IPR009242 Protein of unknown function DUF896 llmg_1475 16f5c7459f012b76c22a811ec129fa85 80 Gene3D G3DSA:1.10.287.540 2 59 6.4E-20 T 14-10-2018 llmg_1475 16f5c7459f012b76c22a811ec129fa85 80 Pfam PF05979 Bacterial protein of unknown function (DUF896) 6 70 8.3E-27 T 14-10-2018 IPR009242 Protein of unknown function DUF896 llmg_0480 830bc39dd82db64809d690c28ed11f16 217 Pfam PF01712 Deoxynucleoside kinase 4 209 3.8E-58 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain llmg_0480 830bc39dd82db64809d690c28ed11f16 217 Gene3D G3DSA:3.40.50.300 2 212 1.3E-51 T 14-10-2018 llmg_0480 830bc39dd82db64809d690c28ed11f16 217 SUPERFAMILY SSF52540 1 209 5.52E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0480 830bc39dd82db64809d690c28ed11f16 217 PIRSF PIRSF000705 1 216 3.2E-52 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 Gene3D G3DSA:1.10.150.240 19 91 5.2E-60 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 187 1.3E-11 T 14-10-2018 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 Gene3D G3DSA:3.40.50.1000 8 216 5.2E-60 T 14-10-2018 IPR023214 HAD superfamily llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 6 198 2.3E-44 T 14-10-2018 IPR006328 L-2-Haloacid dehalogenase GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 8 184 2.3E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 SUPERFAMILY SSF56784 7 220 2.44E-38 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 5.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 181 194 5.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0254 e5e7a0695d904e23edb7a5c82a70c505 224 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 Pfam PF00155 Aminotransferase class I and II 32 387 2.4E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 Gene3D G3DSA:3.40.640.10 64 286 3.3E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 SUPERFAMILY SSF53383 1 392 1.29E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 Gene3D G3DSA:3.90.1150.10 26 387 3.3E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 116 137 4.5E-13 T 14-10-2018 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 230 254 4.5E-13 T 14-10-2018 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 94 114 4.5E-13 T 14-10-2018 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 163 187 4.5E-13 T 14-10-2018 llmg_2019 8d110cc073f94e8870e46d38701ad6c9 393 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 199 222 4.5E-13 T 14-10-2018 llmg_2477 2b4ada33fce7745c85fcccdbd29c8697 508 Gene3D G3DSA:1.20.1740.10 32 504 2.0E-59 T 14-10-2018 llmg_2477 2b4ada33fce7745c85fcccdbd29c8697 508 Pfam PF00324 Amino acid permease 41 494 1.8E-123 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_2477 2b4ada33fce7745c85fcccdbd29c8697 508 PIRSF PIRSF006060 15 507 1.6E-82 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0824 8d5621320999a420a99a57f3603b1367 170 Pfam PF03592 Terminase small subunit 3 133 2.4E-35 T 14-10-2018 IPR005335 Terminase small subunit GO:0006323 llmg_0824 8d5621320999a420a99a57f3603b1367 170 Gene3D G3DSA:1.10.10.1400 1 64 3.8E-27 T 14-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily llmg_0225 8a8e3d6546681d218a473dde753ecc6a 472 Pfam PF01943 Polysaccharide biosynthesis protein 3 268 5.9E-21 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 llmg_0225 8a8e3d6546681d218a473dde753ecc6a 472 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 322 458 4.4E-28 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 SUPERFAMILY SSF55200 128 216 3.92E-32 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 54 216 1.1E-61 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 129 213 2.7E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 SUPERFAMILY SSF54364 52 124 1.57E-24 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 48 216 28.792 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 54 122 2.6E-27 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 Gene3D G3DSA:3.10.20.80 49 124 7.0E-27 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 ProSitePatterns PS00938 Initiation factor 3 signature. 104 117 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 llmg_2031 c29c6d6b1d44ae97689d7c107f5b0814 216 Gene3D G3DSA:3.30.110.10 125 216 3.2E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 llmg_1125 7b45005e667fe75a98829a2351e06f0e 540 Gene3D G3DSA:2.30.310.10 1 166 5.7E-62 T 14-10-2018 llmg_1125 7b45005e667fe75a98829a2351e06f0e 540 Gene3D G3DSA:3.40.970.40 229 263 2.5E-9 T 14-10-2018 llmg_1125 7b45005e667fe75a98829a2351e06f0e 540 Pfam PF05670 Domain of unknown function (DUF814) 424 507 8.4E-23 T 14-10-2018 IPR008532 Domain of unknown function DUF814 llmg_1125 7b45005e667fe75a98829a2351e06f0e 540 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 414 6.5E-134 T 14-10-2018 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 Gene3D G3DSA:3.40.50.2000 18 795 0.0 T 14-10-2018 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 795 0.0 T 14-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 Gene3D G3DSA:3.40.50.2000 459 786 0.0 T 14-10-2018 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 639 651 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 SUPERFAMILY SSF53756 3 797 2.43E-281 T 14-10-2018 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 PIRSF PIRSF000460 1 800 9.0E-205 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 llmg_1871 19299437ed7cdd7996712a83eeb8cef3 800 Pfam PF00343 Carbohydrate phosphorylase 93 794 3.6E-297 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 llmg_2441 8a4a4791b24030b7d3bece3587a83f08 37 TIGRFAM TIGR04079 phero_cyc_pep: KxxxW-cyclized secreted peptide 12 34 5.8E-15 T 14-10-2018 IPR023903 Cyclised secreted peptide llmg_0299 b8b281dd385d7850e2b3d8a031be2e2a 344 SUPERFAMILY SSF51556 3 336 4.4E-65 T 14-10-2018 IPR032466 Metal-dependent hydrolase llmg_0299 b8b281dd385d7850e2b3d8a031be2e2a 344 Pfam PF00962 Adenosine/AMP deaminase 10 331 8.7E-56 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 llmg_0299 b8b281dd385d7850e2b3d8a031be2e2a 344 Hamap MF_00540 Adenosine deaminase [add]. 5 336 54.451 T 14-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 llmg_0299 b8b281dd385d7850e2b3d8a031be2e2a 344 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 333 1.4E-78 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 llmg_0299 b8b281dd385d7850e2b3d8a031be2e2a 344 Gene3D G3DSA:3.20.20.140 2 344 1.5E-91 T 14-10-2018 llmg_0209 1141885e24fce8e8c9630bacd66514b7 350 SUPERFAMILY SSF51735 5 338 6.82E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0209 1141885e24fce8e8c9630bacd66514b7 350 Pfam PF16363 GDP-mannose 4,6 dehydratase 9 317 3.8E-73 T 14-10-2018 IPR016040 NAD(P)-binding domain llmg_0209 1141885e24fce8e8c9630bacd66514b7 350 Gene3D G3DSA:3.90.25.10 199 326 1.1E-122 T 14-10-2018 llmg_0209 1141885e24fce8e8c9630bacd66514b7 350 Gene3D G3DSA:3.40.50.720 7 313 1.1E-122 T 14-10-2018 llmg_0209 1141885e24fce8e8c9630bacd66514b7 350 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 7 331 8.0E-133 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 llmg_1024 b38e8a9d7224cc00b58da615f625551d 229 Pfam PF01988 VIT family 14 221 3.2E-45 T 14-10-2018 IPR008217 Ccc1 family llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 Gene3D G3DSA:3.30.190.20 21 225 1.5E-81 T 14-10-2018 llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.0E-104 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 SUPERFAMILY SSF56808 7 225 1.24E-82 T 14-10-2018 IPR023674 Ribosomal protein L1-like llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 Gene3D G3DSA:3.40.50.790 68 159 1.5E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 1.0E-52 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.78 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 llmg_2276 e5d3299fb61a6d47123e8b4879d6352b 229 PIRSF PIRSF002155 1 227 1.0E-80 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 Pfam PF00535 Glycosyl transferase family 2 333 477 6.7E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 Pfam PF00535 Glycosyl transferase family 2 7 133 2.0E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 SUPERFAMILY SSF53448 4 234 3.2E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 Gene3D G3DSA:3.90.550.10 2 207 7.4E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 SUPERFAMILY SSF53448 331 549 9.38E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1617 a11b1a1735ece25cd0a28c0c5a945e47 995 Gene3D G3DSA:3.90.550.10 266 586 4.2E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1566 ca5a21938fadc6feb65f9dade2ce3cf1 193 Pfam PF01527 Transposase 57 147 2.8E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1566 ca5a21938fadc6feb65f9dade2ce3cf1 193 SUPERFAMILY SSF48295 2 58 6.28E-9 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_1566 ca5a21938fadc6feb65f9dade2ce3cf1 193 Pfam PF13518 Helix-turn-helix domain 9 56 9.3E-7 T 14-10-2018 llmg_1566 ca5a21938fadc6feb65f9dade2ce3cf1 193 SUPERFAMILY SSF46689 60 168 3.05E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1566 ca5a21938fadc6feb65f9dade2ce3cf1 193 Gene3D G3DSA:1.10.10.60 63 182 6.7E-8 T 14-10-2018 llmg_0983 ca5a21938fadc6feb65f9dade2ce3cf1 193 Pfam PF01527 Transposase 57 147 2.8E-8 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0983 ca5a21938fadc6feb65f9dade2ce3cf1 193 SUPERFAMILY SSF48295 2 58 6.28E-9 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_0983 ca5a21938fadc6feb65f9dade2ce3cf1 193 Pfam PF13518 Helix-turn-helix domain 9 56 9.3E-7 T 14-10-2018 llmg_0983 ca5a21938fadc6feb65f9dade2ce3cf1 193 SUPERFAMILY SSF46689 60 168 3.05E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0983 ca5a21938fadc6feb65f9dade2ce3cf1 193 Gene3D G3DSA:1.10.10.60 63 182 6.7E-8 T 14-10-2018 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 SUPERFAMILY SSF56059 83 353 4.42E-69 T 14-10-2018 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 SUPERFAMILY SSF52440 1 113 1.15E-49 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 7.8E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 SUPERFAMILY SSF51246 332 446 9.94E-41 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 Gene3D G3DSA:3.30.470.130 1 448 1.6E-191 T 14-10-2018 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 4.9E-75 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 SMART SM00878 337 444 2.0E-57 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 3.7E-46 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 llmg_1779 ff6da0b7f56cac7c1145b568590ba916 455 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 4.4E-204 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 llmg_0220 bef2d123531220619f92e1085c44fad7 264 SUPERFAMILY SSF53448 8 232 6.88E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0220 bef2d123531220619f92e1085c44fad7 264 Pfam PF00535 Glycosyl transferase family 2 9 168 6.2E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0220 bef2d123531220619f92e1085c44fad7 264 Gene3D G3DSA:3.90.550.10 1 261 1.5E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 9.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 PRINTS PR00447 Natural resistance-associated macrophage protein signature 301 320 9.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 PRINTS PR00447 Natural resistance-associated macrophage protein signature 99 125 9.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 PRINTS PR00447 Natural resistance-associated macrophage protein signature 363 382 9.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 PRINTS PR00447 Natural resistance-associated macrophage protein signature 127 146 9.0E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_2171 f0ceb616ff55c01ae2d6d4992aa4f44e 420 Pfam PF01566 Natural resistance-associated macrophage protein 40 392 6.6E-101 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_0461 5a5c202546d8e57e6a7b4f3e74503af9 459 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 81 248 4.4E-32 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain llmg_0461 5a5c202546d8e57e6a7b4f3e74503af9 459 Gene3D G3DSA:1.10.260.150 42 354 2.2E-74 T 14-10-2018 llmg_0461 5a5c202546d8e57e6a7b4f3e74503af9 459 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 82 248 8.3E-47 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain llmg_1794 78dbabdc3de12ac08e5b7917a51835e8 108 Pfam PF04296 Protein of unknown function (DUF448) 9 81 3.9E-21 T 14-10-2018 IPR007393 Domain of unknown function DUF448 llmg_1794 78dbabdc3de12ac08e5b7917a51835e8 108 SUPERFAMILY SSF64376 4 95 1.28E-27 T 14-10-2018 IPR035931 YlxR-like superfamily llmg_1794 78dbabdc3de12ac08e5b7917a51835e8 108 Gene3D G3DSA:3.30.1230.10 1 97 4.2E-34 T 14-10-2018 IPR035931 YlxR-like superfamily llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.4E-24 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 1.4E-24 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 1.4E-24 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 1.4E-24 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.4E-24 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 SUPERFAMILY SSF55347 151 315 1.62E-58 T 14-10-2018 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 PIRSF PIRSF000149 1 337 5.8E-107 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 SUPERFAMILY SSF51735 3 168 2.16E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 Gene3D G3DSA:3.40.50.720 4 327 1.1E-131 T 14-10-2018 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 Gene3D G3DSA:3.30.360.10 151 317 1.1E-131 T 14-10-2018 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 SMART SM00846 3 152 3.7E-81 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 5.2E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 315 4.7E-57 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0530 fa7f027b40e4c091881a8f6d8907fa08 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 327 6.8E-126 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0805 b20591dd14ecc1c4e23c828781284ef2 239 TIGRFAM TIGR01618 phage_P_loop: phage nucleotide-binding protein 4 225 5.4E-82 T 14-10-2018 IPR006505 Streptococcus phage Sfi11, Gp233, NTP-binding llmg_0805 b20591dd14ecc1c4e23c828781284ef2 239 Gene3D G3DSA:3.40.50.300 3 187 1.3E-5 T 14-10-2018 llmg_0805 b20591dd14ecc1c4e23c828781284ef2 239 Pfam PF13479 AAA domain 16 210 8.0E-35 T 14-10-2018 llmg_0805 b20591dd14ecc1c4e23c828781284ef2 239 SUPERFAMILY SSF52540 9 120 5.47E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0454 8e414120e5e93e9aad734e6e0037685e 521 SUPERFAMILY SSF55604 7 83 3.92E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_0454 8e414120e5e93e9aad734e6e0037685e 521 Pfam PF02378 Phosphotransferase system, EIIC 125 431 1.4E-28 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_0454 8e414120e5e93e9aad734e6e0037685e 521 Pfam PF00367 phosphotransferase system, EIIB 10 42 7.7E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_0454 8e414120e5e93e9aad734e6e0037685e 521 Gene3D G3DSA:3.30.1360.60 1 80 1.4E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 llmg_0454 8e414120e5e93e9aad734e6e0037685e 521 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 Pfam PF00381 PTS HPr component phosphorylation site 3 81 2.8E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 SUPERFAMILY SSF55594 1 83 2.36E-28 T 14-10-2018 IPR035895 HPr-like superfamily llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.3E-33 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 Gene3D G3DSA:3.30.1340.10 1 88 4.8E-36 T 14-10-2018 IPR035895 HPr-like superfamily llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 5.0E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 5.0E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 5.0E-27 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like llmg_0126 c733ace0c0699aa575e1f6627bd13a4c 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site llmg_2114 af21b3150a2168770334955e82ab52f8 139 SUPERFAMILY SSF51283 5 137 4.97E-35 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_2114 af21b3150a2168770334955e82ab52f8 139 Pfam PF00692 dUTPase 11 137 2.5E-20 T 14-10-2018 IPR029054 dUTPase-like llmg_2114 af21b3150a2168770334955e82ab52f8 139 Gene3D G3DSA:2.70.40.10 3 138 2.7E-39 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_2114 af21b3150a2168770334955e82ab52f8 139 TIGRFAM TIGR00576 dut: dUTP diphosphatase 4 138 1.3E-42 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 5 661 1.1E-168 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SUPERFAMILY SSF50249 577 662 3.5E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Pfam PF00773 RNB domain 202 528 1.1E-109 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SMART SM00955 202 531 5.9E-147 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Hamap MF_01895 Ribonuclease R [rnr]. 3 662 52.666 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Pfam PF08206 Ribonuclease B OB domain 18 79 2.8E-15 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Gene3D G3DSA:2.40.50.140 3 81 7.9E-13 T 14-10-2018 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 ProSitePatterns PS01175 Ribonuclease II family signature. 498 522 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Gene3D G3DSA:2.40.50.140 580 667 6.0E-16 T 14-10-2018 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SMART SM00357 17 78 4.6E-5 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 TIGRFAM TIGR02063 RNase_R: ribonuclease R 11 661 5.8E-211 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SMART SM00316 577 662 1.9E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SUPERFAMILY SSF50249 130 577 9.89E-127 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 SUPERFAMILY SSF50249 16 82 5.32E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1304 327ea109df409fccd55923fcbc7fabb6 667 Pfam PF00575 S1 RNA binding domain 578 659 8.4E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 162 5.3E-7 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 5.3E-7 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Gene3D G3DSA:3.50.50.60 299 461 5.4E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Gene3D G3DSA:3.50.50.60 1 225 7.5E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 SMART SM01228 549 620 3.0E-38 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Gene3D G3DSA:1.10.150.570 572 623 2.5E-23 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Pfam PF13932 GidA associated domain 404 619 2.9E-73 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 625 41.537 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 SUPERFAMILY SSF51905 5 264 8.55E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 1.5E-5 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.5E-5 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 371 394 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Gene3D G3DSA:1.10.10.1800 462 553 7.1E-22 T 14-10-2018 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 Pfam PF01134 Glucose inhibited division protein A 8 402 3.8E-165 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 276 290 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 llmg_2035 6fb3668a83c8d22bf61af4b30f99ed5b 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 623 4.5E-274 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 llmg_1195 32d5b7cbab13bde83d625f0b92fe3fe0 206 Gene3D G3DSA:1.10.1760.20 1 199 2.6E-38 T 14-10-2018 llmg_1195 32d5b7cbab13bde83d625f0b92fe3fe0 206 Pfam PF12822 ECF transporter, substrate-specific component 5 191 1.3E-19 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 llmg_1195 32d5b7cbab13bde83d625f0b92fe3fe0 206 PIRSF PIRSF037778 1 202 2.8E-37 T 14-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 Gene3D G3DSA:1.20.58.340 241 298 9.9E-7 T 14-10-2018 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 Gene3D G3DSA:1.20.58.340 117 239 6.5E-18 T 14-10-2018 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 SUPERFAMILY SSF143865 9 232 7.45E-33 T 14-10-2018 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 Pfam PF01544 CorA-like Mg2+ transporter protein 8 295 2.3E-54 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 SUPERFAMILY SSF144083 233 295 2.22E-13 T 14-10-2018 llmg_1016 ffe61655c4461b9be1b92c4dda8792ee 301 Gene3D G3DSA:3.30.460.20 1 116 3.7E-10 T 14-10-2018 llmg_2163 e4cfe1395a9fdeb26a12bedce338e5a6 154 Pfam PF04024 PspC domain 4 65 2.7E-12 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal llmg_2212 f7076eb78e3e3e902d52ef13ab8dfd20 294 PIRSF PIRSF006483 1 284 3.3E-79 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_2212 f7076eb78e3e3e902d52ef13ab8dfd20 294 Gene3D G3DSA:3.30.70.120 194 269 3.6E-20 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal llmg_2212 f7076eb78e3e3e902d52ef13ab8dfd20 294 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 277 4.4E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 llmg_2212 f7076eb78e3e3e902d52ef13ab8dfd20 294 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 218 6.9E-61 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_1058 0197769c485d00092f09f457cd0984f8 306 Gene3D G3DSA:3.40.50.300 1 306 4.8E-89 T 14-10-2018 llmg_1058 0197769c485d00092f09f457cd0984f8 306 Hamap MF_00215 Pantothenate kinase [coaA]. 1 306 141.186 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 llmg_1058 0197769c485d00092f09f457cd0984f8 306 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 85 232 4.7E-16 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 llmg_1058 0197769c485d00092f09f457cd0984f8 306 PIRSF PIRSF000545 1 306 5.3E-136 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 llmg_1058 0197769c485d00092f09f457cd0984f8 306 SUPERFAMILY SSF52540 1 305 1.87E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1058 0197769c485d00092f09f457cd0984f8 306 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 7 305 6.6E-94 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 llmg_0769 4a09713fc3048c6ad087d1934dd4b13d 128 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 6 39 6.4E-15 T 14-10-2018 IPR019933 DivIVA domain llmg_0769 4a09713fc3048c6ad087d1934dd4b13d 128 Pfam PF05103 DivIVA protein 7 65 1.1E-14 T 14-10-2018 IPR007793 DivIVA family llmg_0769 4a09713fc3048c6ad087d1934dd4b13d 128 PIRSF PIRSF029938 1 123 9.5E-30 T 14-10-2018 IPR011229 Cell cycle protein GpsB llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Pfam PF01227 GTP cyclohydrolase I 169 347 2.2E-70 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 227 243 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 131 8.4E-39 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 SUPERFAMILY SSF55083 1 138 4.58E-46 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Gene3D G3DSA:1.10.286.10 155 209 2.8E-17 T 14-10-2018 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 SUPERFAMILY SSF55620 161 347 1.11E-69 T 14-10-2018 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Gene3D G3DSA:3.30.70.560 1 154 1.2E-45 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Gene3D G3DSA:3.30.1130.10 219 349 1.1E-51 T 14-10-2018 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 169 348 1.5E-62 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 131 8.2E-33 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 llmg_1337 d39bf3f0b3f394aa7e14a8cc99510741 349 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 165 349 37.282 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 Gene3D G3DSA:3.30.420.40 195 395 1.2E-75 T 14-10-2018 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 376 388 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 323 339 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 202 223 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 301 314 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 172 185 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PRINTS PR00471 Acetate kinase family signature 4 15 8.9E-43 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 Gene3D G3DSA:3.30.420.40 2 194 1.2E-70 T 14-10-2018 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 PIRSF PIRSF000722 1 394 4.5E-143 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 SUPERFAMILY SSF53067 156 393 2.59E-84 T 14-10-2018 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 391 1.1E-150 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 SUPERFAMILY SSF53067 1 195 1.29E-66 T 14-10-2018 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 Pfam PF00871 Acetokinase family 3 389 1.2E-147 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2288 0db3af7c629b7079689e9b0ab53a5709 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 178.335 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 Gene3D G3DSA:3.30.70.1560 140 232 3.5E-56 T 14-10-2018 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 SUPERFAMILY SSF55174 13 84 1.3E-15 T 14-10-2018 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 SUPERFAMILY SSF55120 63 253 2.07E-46 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 Pfam PF01479 S4 domain 19 65 1.1E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 Gene3D G3DSA:3.10.290.10 14 73 1.2E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 116 130 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 Gene3D G3DSA:3.30.70.580 81 240 3.5E-56 T 14-10-2018 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 SMART SM00363 19 76 3.1E-15 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 Pfam PF00849 RNA pseudouridylate synthase 79 213 3.5E-22 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1194 d3e2771fea5a5eb633b7cdbe636e5eb4 257 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 83 243 8.4E-50 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 llmg_1355 a272e27a95e285c92ba97fed6abd9b03 273 SUPERFAMILY SSF56784 9 234 1.27E-9 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1355 a272e27a95e285c92ba97fed6abd9b03 273 Gene3D G3DSA:3.40.50.1000 6 140 5.4E-7 T 14-10-2018 IPR023214 HAD superfamily llmg_2099 8b459f0338f2ba2bb584467a7fcdcd18 69 Pfam PF06341 Protein of unknown function (DUF1056) 7 69 3.7E-31 T 14-10-2018 IPR009406 Protein of unknown function DUF1056 llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 Pfam PF13186 Iron-sulfur cluster-binding domain 348 409 9.1E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 Gene3D G3DSA:3.20.20.70 100 416 1.9E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 348 426 3.2E-13 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 TIGRFAM TIGR04080 rSAM_pep_cyc: KxxxW cyclic peptide radical SAM maturase 1 439 2.5E-272 T 14-10-2018 IPR024017 Petide cyclisation enzyme, radical SAM llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 Pfam PF04055 Radical SAM superfamily 116 264 9.2E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 SUPERFAMILY SSF102114 105 419 9.29E-46 T 14-10-2018 llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 Pfam PF13394 4Fe-4S single cluster domain 117 185 2.1E-5 T 14-10-2018 llmg_2440 1d576d62f96f2be0d8c9ac515e5efd87 439 SMART SM00729 107 308 1.1E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 llmg_0938 633043da93174b73a6a66920ded3154b 130 SUPERFAMILY SSF54611 4 130 4.58E-43 T 14-10-2018 IPR035958 SecB-like superfamily llmg_0938 633043da93174b73a6a66920ded3154b 130 PIRSF PIRSF031568 3 130 6.6E-58 T 14-10-2018 IPR009530 Protein of unknown function DUF1149 llmg_0938 633043da93174b73a6a66920ded3154b 130 Pfam PF06619 Protein of unknown function (DUF1149) 4 130 1.9E-45 T 14-10-2018 IPR009530 Protein of unknown function DUF1149 llmg_0938 633043da93174b73a6a66920ded3154b 130 Gene3D G3DSA:3.10.420.10 1 130 1.5E-47 T 14-10-2018 IPR035958 SecB-like superfamily llmg_1343 ef5c161532575e2a2802f22a3a9b3eab 196 PIRSF PIRSF029256 28 185 3.7E-60 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 llmg_1343 ef5c161532575e2a2802f22a3a9b3eab 196 Pfam PF00588 SpoU rRNA Methylase family 30 173 1.6E-30 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 llmg_1343 ef5c161532575e2a2802f22a3a9b3eab 196 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 29 182 32.283 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 llmg_1343 ef5c161532575e2a2802f22a3a9b3eab 196 SUPERFAMILY SSF75217 29 183 1.24E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_1343 ef5c161532575e2a2802f22a3a9b3eab 196 Gene3D G3DSA:3.40.1280.10 17 196 3.2E-72 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 393 2.9E-155 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 202 223 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 322 338 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 300 313 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 172 185 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PRINTS PR00471 Acetate kinase family signature 375 387 1.5E-42 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 SUPERFAMILY SSF53067 1 195 4.53E-65 T 14-10-2018 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 Gene3D G3DSA:3.30.420.40 195 395 3.5E-78 T 14-10-2018 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 Pfam PF00871 Acetokinase family 3 388 1.1E-147 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 Gene3D G3DSA:3.30.420.40 2 194 1.4E-68 T 14-10-2018 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 PIRSF PIRSF000722 1 395 2.6E-148 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 SUPERFAMILY SSF53067 156 393 6.85E-84 T 14-10-2018 llmg_2289 9ad62e1ebb0eef8d7b1957b693258fdd 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 183.075 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 llmg_0258 02bed6090ab90a1195acab5494291aa6 123 Pfam PF03610 PTS system fructose IIA component 4 112 4.2E-28 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 llmg_0258 02bed6090ab90a1195acab5494291aa6 123 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 118 5.9E-37 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain llmg_0258 02bed6090ab90a1195acab5494291aa6 123 SUPERFAMILY SSF53062 2 120 2.22E-33 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 llmg_0258 02bed6090ab90a1195acab5494291aa6 123 Gene3D G3DSA:3.40.50.510 1 123 7.8E-43 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 llmg_2058 633f8920bb7a517ee2aa38a0fd012922 196 Gene3D G3DSA:3.30.110.150 100 186 9.8E-22 T 14-10-2018 IPR038594 SepF-like superfamily llmg_2058 633f8920bb7a517ee2aa38a0fd012922 196 Hamap MF_01197 Cell division protein SepF [sepF]. 4 184 18.4 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 llmg_2058 633f8920bb7a517ee2aa38a0fd012922 196 Pfam PF04472 Cell division protein SepF 106 176 2.7E-20 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 llmg_1422 989016f50717de60426e494eb421ffe7 305 SUPERFAMILY SSF56235 2 304 8.49E-79 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_1422 989016f50717de60426e494eb421ffe7 305 Gene3D G3DSA:3.60.60.10 1 304 1.2E-76 T 14-10-2018 llmg_1422 989016f50717de60426e494eb421ffe7 305 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 301 4.9E-57 T 14-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal llmg_1358 c619d9783b2667f16fc910195d0ecd21 408 SUPERFAMILY SSF51621 36 337 5.34E-18 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 llmg_1358 c619d9783b2667f16fc910195d0ecd21 408 Gene3D G3DSA:3.20.20.60 297 388 3.0E-9 T 14-10-2018 llmg_1358 c619d9783b2667f16fc910195d0ecd21 408 Gene3D G3DSA:3.20.20.60 36 245 6.0E-6 T 14-10-2018 llmg_1358 c619d9783b2667f16fc910195d0ecd21 408 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 30 388 7.3E-116 T 14-10-2018 IPR039480 C-C bond lyase-like llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 SMART SM00345 7 66 1.3E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 SUPERFAMILY SSF46785 2 76 1.11E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 SMART SM00866 88 228 8.5E-24 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 SUPERFAMILY SSF64288 54 235 2.2E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 Pfam PF07702 UTRA domain 89 228 5.8E-29 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 Gene3D G3DSA:3.40.1410.10 72 232 4.0E-25 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 3 235 1.7E-78 T 14-10-2018 IPR012770 Trehalose operon transcriptional repressor llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 Gene3D G3DSA:1.10.10.10 1 71 1.0E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0452 83acbee0031bbf6d62f9bcdcfd3e8c5c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 5.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1879 302f7d6d95724c770c1b7eccf36a9dde 133 Pfam PF03780 Asp23 family, cell envelope-related function 11 113 7.2E-31 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 llmg_0491 bb1c30bcea147ce64e8c231f538052ee 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 14 216 1.5E-57 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 llmg_0491 bb1c30bcea147ce64e8c231f538052ee 217 Pfam PF03006 Haemolysin-III related 10 208 6.8E-42 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 llmg_1844 4d9d709265f4b0c7107efb9590468510 312 Gene3D G3DSA:3.60.21.10 62 301 1.5E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_1844 4d9d709265f4b0c7107efb9590468510 312 SUPERFAMILY SSF56300 66 286 1.52E-20 T 14-10-2018 llmg_1844 4d9d709265f4b0c7107efb9590468510 312 Pfam PF00149 Calcineurin-like phosphoesterase 73 271 5.3E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 SMART SM00382 365 545 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 SUPERFAMILY SSF90123 18 309 1.29E-39 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 Pfam PF00005 ABC transporter 363 498 5.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 Pfam PF00664 ABC transporter transmembrane region 30 290 6.0E-13 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 SUPERFAMILY SSF52540 334 528 4.47E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 Gene3D G3DSA:3.40.50.300 326 545 2.1E-45 T 14-10-2018 llmg_0989 fd3b1cf95f44b34c9b89c84ed419790b 548 Gene3D G3DSA:1.20.1560.10 16 325 7.4E-29 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 SUPERFAMILY SSF55486 3 161 2.44E-39 T 14-10-2018 llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 38 159 1.8E-38 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 128 138 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 Gene3D G3DSA:3.40.390.30 3 162 4.4E-39 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 162 21.918 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 llmg_1487 e7fc6106dba1e71cf3e351a3d2c77843 162 Pfam PF02130 Uncharacterized protein family UPF0054 14 157 2.4E-40 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 120 1.8E-41 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L llmg_2385 52d9809db48094cc9ff86a627f352a15 121 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 2.5E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 2.5E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 2.5E-11 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 120 5.1E-36 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 14-10-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site llmg_2385 52d9809db48094cc9ff86a627f352a15 121 SUPERFAMILY SSF81330 10 116 6.41E-32 T 14-10-2018 IPR036019 Gated mechanosensitive channel llmg_2385 52d9809db48094cc9ff86a627f352a15 121 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 121 21.881 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 llmg_2385 52d9809db48094cc9ff86a627f352a15 121 Gene3D G3DSA:1.10.1200.120 1 121 5.6E-40 T 14-10-2018 IPR036019 Gated mechanosensitive channel llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 SUPERFAMILY SSF51905 3 210 7.66E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 Gene3D G3DSA:3.50.50.100 1 416 3.6E-109 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 SUPERFAMILY SSF51905 159 348 3.81E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 335 1.9E-42 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 6.1E-9 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.1E-9 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.1E-9 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 6.1E-9 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.5E-8 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 262 276 7.5E-8 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 7.5E-8 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 357 378 7.5E-8 T 14-10-2018 llmg_1735 7791ce0dd85c8218c6aaafa17bcc1c23 419 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 7.5E-8 T 14-10-2018 llmg_2060 08ac18e5d9d1100c505278de28027814 419 Gene3D G3DSA:3.40.50.1440 6 221 2.0E-80 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 SUPERFAMILY SSF55307 205 319 5.26E-41 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 15 174 6.8E-43 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 SMART SM00865 208 325 8.2E-47 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 SMART SM00864 14 206 1.8E-115 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 PRINTS PR00423 Cell division protein FtsZ signature 190 212 4.1E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 PRINTS PR00423 Cell division protein FtsZ signature 127 148 4.1E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 PRINTS PR00423 Cell division protein FtsZ signature 213 234 4.1E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 PRINTS PR00423 Cell division protein FtsZ signature 99 119 4.1E-51 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 ProSitePatterns PS01134 FtsZ protein signature 1. 45 79 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 llmg_2060 08ac18e5d9d1100c505278de28027814 419 ProSitePatterns PS01135 FtsZ protein signature 2. 98 119 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 llmg_2060 08ac18e5d9d1100c505278de28027814 419 Pfam PF12327 FtsZ family, C-terminal domain 223 316 8.7E-30 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal llmg_2060 08ac18e5d9d1100c505278de28027814 419 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 334 1.4E-127 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 llmg_2060 08ac18e5d9d1100c505278de28027814 419 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 10 399 38.249 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 llmg_2060 08ac18e5d9d1100c505278de28027814 419 SUPERFAMILY SSF52490 14 209 1.1E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 llmg_2060 08ac18e5d9d1100c505278de28027814 419 Gene3D G3DSA:3.30.1330.20 222 328 1.0E-35 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 Gene3D G3DSA:1.10.8.60 8 236 8.5E-101 T 14-10-2018 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 SUPERFAMILY SSF52540 32 223 1.45E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 SMART SM00382 37 191 4.9E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 329 3.3E-129 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.1E-41 T 14-10-2018 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 Gene3D G3DSA:3.40.50.300 13 177 8.5E-101 T 14-10-2018 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.6E-5 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 llmg_2478 9b9aefdaf7cb8c50d0394db2575e618e 553 SUPERFAMILY SSF48019 247 339 8.5E-9 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 llmg_1912 6944de126d1692abb25dd2e5d1e1fe5a 282 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 36 282 4.2E-76 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like llmg_1912 6944de126d1692abb25dd2e5d1e1fe5a 282 SUPERFAMILY SSF53474 108 266 2.14E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1912 6944de126d1692abb25dd2e5d1e1fe5a 282 Gene3D G3DSA:3.40.50.1820 39 282 2.7E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0629 d0c54332b97be4af63b868a951bdb339 787 Gene3D G3DSA:3.20.70.20 4 774 9.8E-218 T 14-10-2018 llmg_0629 d0c54332b97be4af63b868a951bdb339 787 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 13 774 0.0 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 llmg_0629 d0c54332b97be4af63b868a951bdb339 787 SUPERFAMILY SSF51998 7 773 8.55E-198 T 14-10-2018 llmg_0629 d0c54332b97be4af63b868a951bdb339 787 Pfam PF02901 Pyruvate formate lyase-like 30 615 8.1E-150 T 14-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 llmg_0629 d0c54332b97be4af63b868a951bdb339 787 ProSitePatterns PS00850 Glycine radical domain signature. 744 752 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site llmg_0629 d0c54332b97be4af63b868a951bdb339 787 PIRSF PIRSF000379 10 774 3.1E-279 T 14-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 llmg_0629 d0c54332b97be4af63b868a951bdb339 787 Pfam PF01228 Glycine radical 644 753 8.0E-21 T 14-10-2018 IPR001150 Glycine radical domain GO:0003824 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 18 321 4.1E-120 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 SUPERFAMILY SSF53659 2 324 4.93E-92 T 14-10-2018 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 Gene3D G3DSA:3.40.50.10750 141 297 1.5E-131 T 14-10-2018 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 PIRSF PIRSF000428 1 326 9.5E-110 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 321 2.0E-124 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 llmg_0763 42713b5ac7cdb4d7328d00151a85d32d 326 Gene3D G3DSA:3.40.50.10950 17 321 1.5E-131 T 14-10-2018 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 Gene3D G3DSA:3.60.120.10 2 454 6.5E-164 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 9 455 6.6E-191 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 Pfam PF00425 chorismate binding enzyme 194 447 9.3E-95 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 Pfam PF04715 Anthranilate synthase component I, N terminal region 10 143 1.9E-29 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 PRINTS PR00095 Anthranilate synthase component I signature 295 308 7.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 PRINTS PR00095 Anthranilate synthase component I signature 309 322 7.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 PRINTS PR00095 Anthranilate synthase component I signature 389 403 7.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 PRINTS PR00095 Anthranilate synthase component I signature 404 418 7.5E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 llmg_1030 22b8194d4040d8c04a66f89e594ad0b8 456 SUPERFAMILY SSF56322 5 454 4.19E-145 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_2205 7050a337cef8db1cac46029dd7e9310d 173 Pfam PF01872 RibD C-terminal domain 2 163 1.1E-15 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 llmg_2205 7050a337cef8db1cac46029dd7e9310d 173 Gene3D G3DSA:3.40.430.10 2 171 1.3E-42 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_2205 7050a337cef8db1cac46029dd7e9310d 173 SUPERFAMILY SSF53597 1 171 9.29E-36 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_1305 2c75663936749b9bdd8ca729ba2026a5 110 SMART SM00530 9 63 3.0E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1305 2c75663936749b9bdd8ca729ba2026a5 110 SUPERFAMILY SSF47413 1 69 1.13E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1305 2c75663936749b9bdd8ca729ba2026a5 110 Pfam PF12844 Helix-turn-helix domain 8 67 2.0E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1305 2c75663936749b9bdd8ca729ba2026a5 110 Gene3D G3DSA:1.10.260.40 6 110 2.9E-12 T 14-10-2018 llmg_1465 45b8e706b2e08954b5669a8eeb3c0a55 449 Pfam PF08353 Domain of unknown function (DUF1727) 321 431 8.4E-34 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 llmg_1465 45b8e706b2e08954b5669a8eeb3c0a55 449 Gene3D G3DSA:3.40.1190.10 39 303 1.2E-40 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_1465 45b8e706b2e08954b5669a8eeb3c0a55 449 Pfam PF08245 Mur ligase middle domain 54 283 3.3E-14 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_1465 45b8e706b2e08954b5669a8eeb3c0a55 449 SUPERFAMILY SSF53623 39 297 9.27E-34 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_1894 0437e85d6c1ce40e3f2ce7f47548f10c 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 172 2.3E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_1894 0437e85d6c1ce40e3f2ce7f47548f10c 193 SMART SM00855 3 144 3.8E-6 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_1894 0437e85d6c1ce40e3f2ce7f47548f10c 193 SUPERFAMILY SSF53254 1 175 7.71E-31 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_1894 0437e85d6c1ce40e3f2ce7f47548f10c 193 Gene3D G3DSA:3.40.50.1240 1 180 9.4E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_0156 694780ce51720038a71a842b3b5582cd 261 Pfam PF00106 short chain dehydrogenase 7 198 1.3E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 SUPERFAMILY SSF51735 1 199 3.01E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0156 694780ce51720038a71a842b3b5582cd 261 Gene3D G3DSA:3.40.50.720 1 254 1.0E-43 T 14-10-2018 llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 3.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.1E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0156 694780ce51720038a71a842b3b5582cd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1627 2aa7c9b2fce05025ff6e825ab9394b03 154 Gene3D G3DSA:1.10.10.10 7 154 6.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1627 2aa7c9b2fce05025ff6e825ab9394b03 154 SMART SM00347 24 124 4.1E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1627 2aa7c9b2fce05025ff6e825ab9394b03 154 Pfam PF12802 MarR family 32 87 1.6E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1627 2aa7c9b2fce05025ff6e825ab9394b03 154 SUPERFAMILY SSF46785 19 135 4.68E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1632 fe4262b2fedb1472618eb8649d5ac2e9 215 Gene3D G3DSA:3.40.50.1000 76 215 1.3E-24 T 14-10-2018 IPR023214 HAD superfamily llmg_1632 fe4262b2fedb1472618eb8649d5ac2e9 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 176 1.5E-25 T 14-10-2018 llmg_1632 fe4262b2fedb1472618eb8649d5ac2e9 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 61 172 1.3E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_1632 fe4262b2fedb1472618eb8649d5ac2e9 215 Gene3D G3DSA:1.10.150.240 16 75 2.3E-30 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_1632 fe4262b2fedb1472618eb8649d5ac2e9 215 SUPERFAMILY SSF56784 1 185 2.21E-33 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1747 8b634ce4ff3e8e315a3a218b14323573 436 PIRSF PIRSF006060 1 434 7.3E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1747 8b634ce4ff3e8e315a3a218b14323573 436 Pfam PF00324 Amino acid permease 5 423 9.4E-73 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_1747 8b634ce4ff3e8e315a3a218b14323573 436 Gene3D G3DSA:1.20.1740.10 1 435 3.4E-49 T 14-10-2018 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 355 7.2E-116 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 358 163.793 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 PIRSF PIRSF016049 1 170 2.4E-44 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 PIRSF PIRSF016049 153 358 4.7E-73 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 355 5.3E-164 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 Gene3D G3DSA:3.20.20.150 1 358 4.5E-143 T 14-10-2018 llmg_0859 7d285937ca4c2fb9bda3425627236df5 358 SUPERFAMILY SSF51658 1 354 2.61E-87 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily llmg_0360 0d70990752499872abfbefe53254ffbb 349 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 280 308 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Pfam PF07478 D-ala D-ala ligase C-terminus 135 335 3.5E-76 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 PIRSF PIRSF039102 1 346 2.9E-100 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 SUPERFAMILY SSF56059 127 339 7.42E-61 T 14-10-2018 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Gene3D G3DSA:3.40.50.20 3 115 1.1E-33 T 14-10-2018 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 338 38.765 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Gene3D G3DSA:3.30.470.20 116 338 1.8E-75 T 14-10-2018 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Gene3D G3DSA:3.30.1490.20 142 211 1.8E-75 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 llmg_0360 0d70990752499872abfbefe53254ffbb 349 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 94 105 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 SUPERFAMILY SSF52440 3 126 2.59E-27 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily llmg_0360 0d70990752499872abfbefe53254ffbb 349 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 337 9.0E-102 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0360 0d70990752499872abfbefe53254ffbb 349 Pfam PF01820 D-ala D-ala ligase N-terminus 6 116 2.3E-23 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 SUPERFAMILY SSF48557 4 430 2.36E-134 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 3 430 8.6E-169 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 ProSitePatterns PS00163 Fumarate lyases signature. 262 271 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 SMART SM00998 350 430 5.3E-36 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00145 Argininosuccinate lyase family signature 217 241 3.5E-9 T 14-10-2018 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00145 Argininosuccinate lyase family signature 129 149 3.5E-9 T 14-10-2018 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00145 Argininosuccinate lyase family signature 262 278 3.5E-9 T 14-10-2018 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 351 429 1.0E-22 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 Gene3D G3DSA:1.20.200.10 94 349 5.8E-95 T 14-10-2018 llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 Gene3D G3DSA:1.10.275.10 1 93 1.1E-37 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 Pfam PF00206 Lyase 8 287 5.1E-70 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00149 Fumarate lyase superfamily signature 89 107 9.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 9.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00149 Fumarate lyase superfamily signature 217 244 9.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 PRINTS PR00149 Fumarate lyase superfamily signature 262 278 9.8E-26 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0783 b8b9a14761120198ecce76fdcdfccd84 431 Gene3D G3DSA:1.10.40.30 350 431 1.1E-29 T 14-10-2018 llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 Gene3D G3DSA:1.10.10.10 2 99 2.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 SUPERFAMILY SSF46785 4 90 2.2E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 SMART SM00418 9 87 3.0E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 Pfam PF01022 Bacterial regulatory protein, arsR family 17 60 1.6E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 6.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 6.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_0888 906ad0a41f820cfa48f1ded549c4e56f 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 6.0E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_0293 829101f3b2887d0a5329c6ba52d02e7e 373 Gene3D G3DSA:3.20.20.370 125 360 1.6E-70 T 14-10-2018 llmg_0293 829101f3b2887d0a5329c6ba52d02e7e 373 SUPERFAMILY SSF88713 175 358 4.94E-62 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 llmg_0293 829101f3b2887d0a5329c6ba52d02e7e 373 Pfam PF01522 Polysaccharide deacetylase 175 284 2.6E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 SUPERFAMILY SSF46785 83 157 7.71E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 Gene3D G3DSA:1.10.10.10 1 76 1.0E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 4 182 9.4E-43 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 179 32.899 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 Gene3D G3DSA:1.10.10.10 77 177 2.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 166 1.1E-52 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 SUPERFAMILY SSF46785 5 78 1.54E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1193 de5f923139e9e01ed6a3b1f6259d7d54 188 PIRSF PIRSF019345 2 188 8.5E-49 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 llmg_2103 6e3f19e2013633a5a5febc19dcbb41ae 172 Pfam PF01844 HNH endonuclease 91 138 1.2E-11 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 llmg_2103 6e3f19e2013633a5a5febc19dcbb41ae 172 Gene3D G3DSA:3.30.40.60 35 171 2.0E-10 T 14-10-2018 llmg_2103 6e3f19e2013633a5a5febc19dcbb41ae 172 SMART SM00507 78 134 1.5E-9 T 14-10-2018 IPR003615 HNH nuclease llmg_2545 5a59cb40e2e528ec3920528dbd650cc5 130 SUPERFAMILY SSF54211 6 130 5.31E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2545 5a59cb40e2e528ec3920528dbd650cc5 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.2E-47 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 llmg_2545 5a59cb40e2e528ec3920528dbd650cc5 130 Gene3D G3DSA:3.30.230.10 1 130 1.7E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2545 5a59cb40e2e528ec3920528dbd650cc5 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 llmg_2545 5a59cb40e2e528ec3920528dbd650cc5 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.929 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid llmg_1772 e4d48b279cb5b077f033d761987e4363 125 Pfam PF00581 Rhodanese-like domain 33 116 4.1E-12 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1772 e4d48b279cb5b077f033d761987e4363 125 SUPERFAMILY SSF52821 8 116 1.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1772 e4d48b279cb5b077f033d761987e4363 125 SMART SM00450 29 121 9.8E-15 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1772 e4d48b279cb5b077f033d761987e4363 125 Gene3D G3DSA:3.40.250.10 26 118 2.8E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 PIRSF PIRSF000164 1 310 3.5E-78 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 245 265 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 Gene3D G3DSA:2.30.26.10 53 220 3.9E-120 T 14-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 Gene3D G3DSA:3.20.20.70 11 303 3.9E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 SUPERFAMILY SSF51395 2 308 7.63E-73 T 14-10-2018 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 308 30.908 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 306 6.4E-53 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 Pfam PF01180 Dihydroorotate dehydrogenase 1 293 1.1E-97 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 llmg_0952 116b7b10bc58d0287f5afe7ea3e651ce 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 Gene3D G3DSA:3.20.20.80 1 452 8.4E-134 T 14-10-2018 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 284 298 3.7E-11 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 412 3.7E-11 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 352 360 3.7E-11 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 384 3.7E-11 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 PRINTS PR00131 Glycosyl hydrolase family 1 signature 419 431 3.7E-11 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 Pfam PF00232 Glycosyl hydrolase family 1 2 449 1.4E-119 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1738 7bc0f0a675e010e559098beb498f6a76 453 SUPERFAMILY SSF51445 3 449 2.75E-140 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0394 818ee17553ba116ae07379817f4cca43 324 Gene3D G3DSA:1.50.10.150 7 308 4.3E-33 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily llmg_0394 818ee17553ba116ae07379817f4cca43 324 Pfam PF03595 Voltage-dependent anion channel 17 302 1.1E-21 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 7.3E-24 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 85 2.4E-16 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 96 4.0E-41 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 SUPERFAMILY SSF75471 1 95 1.7E-21 T 14-10-2018 IPR035920 YhbY-like superfamily llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 Gene3D G3DSA:3.30.110.60 1 102 6.5E-28 T 14-10-2018 IPR035920 YhbY-like superfamily llmg_0235 e641bb84dcb208aa68fb681751a872c6 104 SMART SM01103 3 85 1.7E-27 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 llmg_2217 9346414f536e96856273a89f7125505c 430 Pfam PF03129 Anticodon binding domain 330 415 7.2E-15 T 14-10-2018 IPR004154 Anticodon-binding llmg_2217 9346414f536e96856273a89f7125505c 430 SUPERFAMILY SSF55681 3 320 2.99E-100 T 14-10-2018 llmg_2217 9346414f536e96856273a89f7125505c 430 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 423 33.677 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 llmg_2217 9346414f536e96856273a89f7125505c 430 SUPERFAMILY SSF52954 329 417 6.8E-22 T 14-10-2018 llmg_2217 9346414f536e96856273a89f7125505c 430 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 409 1.5E-155 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 llmg_2217 9346414f536e96856273a89f7125505c 430 Gene3D G3DSA:3.40.50.800 326 414 6.8E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily llmg_2217 9346414f536e96856273a89f7125505c 430 PIRSF PIRSF001549 1 419 1.6E-120 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 llmg_2217 9346414f536e96856273a89f7125505c 430 Pfam PF13393 Histidyl-tRNA synthetase 8 312 7.0E-44 T 14-10-2018 llmg_2217 9346414f536e96856273a89f7125505c 430 Gene3D G3DSA:3.30.930.10 1 325 1.4E-116 T 14-10-2018 llmg_0160 fd3ff6d99b6b64309a6d1a937710e0f6 212 Pfam PF00881 Nitroreductase family 7 189 4.1E-29 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_0160 fd3ff6d99b6b64309a6d1a937710e0f6 212 SUPERFAMILY SSF55469 1 210 1.31E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0160 fd3ff6d99b6b64309a6d1a937710e0f6 212 Gene3D G3DSA:3.40.109.10 1 209 2.1E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0501 9387204f3689b523c292cfa08f9897ec 269 ProSitePatterns PS00211 ABC transporters family signature. 121 135 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0501 9387204f3689b523c292cfa08f9897ec 269 SUPERFAMILY SSF52540 2 211 3.79E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0501 9387204f3689b523c292cfa08f9897ec 269 SMART SM00382 25 197 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0501 9387204f3689b523c292cfa08f9897ec 269 Gene3D G3DSA:3.40.50.300 1 247 8.8E-55 T 14-10-2018 llmg_0501 9387204f3689b523c292cfa08f9897ec 269 Pfam PF00005 ABC transporter 16 148 1.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Pfam PF16745 RsgA N-terminal domain 4 57 2.6E-25 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 SUPERFAMILY SSF52540 66 295 7.21E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Gene3D G3DSA:1.10.40.50 234 299 5.0E-22 T 14-10-2018 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Gene3D G3DSA:2.40.50.140 1 62 6.3E-25 T 14-10-2018 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 40 289 6.6E-68 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Pfam PF03193 RsgA GTPase 61 231 2.4E-57 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Gene3D G3DSA:3.40.50.300 63 231 3.2E-38 T 14-10-2018 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 3 296 37.809 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 llmg_2193 38e510e0f451e67d524d17646c3d0b54 307 SUPERFAMILY SSF50249 4 62 1.63E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0205 611fdbad4deb0cd4d6ac6a090356915f 219 SUPERFAMILY SSF158560 2 60 2.35E-5 T 14-10-2018 llmg_0205 611fdbad4deb0cd4d6ac6a090356915f 219 PIRSF PIRSF033111 1 219 4.9E-97 T 14-10-2018 IPR009214 Protein of unknown function DUF1129 llmg_0205 611fdbad4deb0cd4d6ac6a090356915f 219 Pfam PF06570 Protein of unknown function (DUF1129) 7 211 2.6E-70 T 14-10-2018 IPR009214 Protein of unknown function DUF1129 llmg_0523 be791a9c697eb7850649c5db9e28f82b 459 Pfam PF07690 Major Facilitator Superfamily 32 296 4.7E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0523 be791a9c697eb7850649c5db9e28f82b 459 Gene3D G3DSA:1.20.1250.20 251 451 3.9E-40 T 14-10-2018 llmg_0523 be791a9c697eb7850649c5db9e28f82b 459 PIRSF PIRSF002808 6 457 1.6E-87 T 14-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 llmg_0523 be791a9c697eb7850649c5db9e28f82b 459 Gene3D G3DSA:1.20.1250.20 21 231 1.7E-35 T 14-10-2018 llmg_0523 be791a9c697eb7850649c5db9e28f82b 459 SUPERFAMILY SSF103473 17 441 7.46E-64 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 Gene3D G3DSA:3.40.50.2300 165 324 3.3E-54 T 14-10-2018 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 SUPERFAMILY SSF53822 81 327 1.59E-50 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 SMART SM00354 3 73 3.0E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 5.0E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 Pfam PF13377 Periplasmic binding protein-like domain 175 326 4.4E-25 T 14-10-2018 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 Gene3D G3DSA:3.40.50.2300 82 318 3.3E-54 T 14-10-2018 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 SUPERFAMILY SSF47413 1 60 3.75E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0484 18b08ef9b25389bbb054eaac15d9ac7e 329 Gene3D G3DSA:1.10.260.40 1 61 1.8E-21 T 14-10-2018 llmg_0172 c753d374b687448b18d5059f592e99bf 262 Gene3D G3DSA:1.10.10.10 168 261 5.1E-40 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0172 c753d374b687448b18d5059f592e99bf 262 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 4 257 2.1E-129 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 llmg_0172 c753d374b687448b18d5059f592e99bf 262 Gene3D G3DSA:3.30.450.40 2 167 3.0E-51 T 14-10-2018 IPR029016 GAF-like domain superfamily llmg_0172 c753d374b687448b18d5059f592e99bf 262 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 262 118.124 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 llmg_0172 c753d374b687448b18d5059f592e99bf 262 Pfam PF06018 CodY GAF-like domain 3 182 2.1E-72 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 llmg_0172 c753d374b687448b18d5059f592e99bf 262 SUPERFAMILY SSF46785 171 259 1.23E-40 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0172 c753d374b687448b18d5059f592e99bf 262 PIRSF PIRSF011572 1 261 3.1E-121 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 llmg_0172 c753d374b687448b18d5059f592e99bf 262 Pfam PF08222 CodY helix-turn-helix domain 201 258 1.1E-34 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal llmg_1751 d68cfbe55011a0b0f7d934cfd144fe5b 722 Gene3D G3DSA:3.40.720.10 254 575 8.4E-62 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 llmg_1751 d68cfbe55011a0b0f7d934cfd144fe5b 722 Pfam PF00884 Sulfatase 263 565 2.7E-26 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 llmg_1751 d68cfbe55011a0b0f7d934cfd144fe5b 722 SUPERFAMILY SSF53649 260 671 7.69E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 llmg_1751 d68cfbe55011a0b0f7d934cfd144fe5b 722 PIRSF PIRSF005091 7 656 2.2E-229 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 Pfam PF02926 THUMP domain 38 126 3.3E-6 T 14-10-2018 IPR004114 THUMP domain GO:0003723 llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 Gene3D G3DSA:3.30.2130.30 9 254 8.1E-123 T 14-10-2018 llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 308 314 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 Pfam PF01170 Putative RNA methylase family UPF0020 169 374 6.8E-47 T 14-10-2018 IPR000241 Putative RNA methylase domain llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 Gene3D G3DSA:3.40.50.150 167 374 8.1E-123 T 14-10-2018 llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 SMART SM00981 60 161 3.4E-6 T 14-10-2018 IPR004114 THUMP domain GO:0003723 llmg_0771 44d82e30de02cd4d28d3e1cad2b43a76 384 SUPERFAMILY SSF53335 150 380 1.43E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0466 816879770506796959c10c8aa0f12c77 378 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 182 202 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site llmg_0466 816879770506796959c10c8aa0f12c77 378 SUPERFAMILY SSF53383 3 362 6.18E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0466 816879770506796959c10c8aa0f12c77 378 Gene3D G3DSA:3.90.1150.10 10 366 1.2E-104 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0466 816879770506796959c10c8aa0f12c77 378 Gene3D G3DSA:3.40.640.10 15 260 1.2E-104 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0466 816879770506796959c10c8aa0f12c77 378 Pfam PF00266 Aminotransferase class-V 31 322 8.8E-26 T 14-10-2018 IPR000192 Aminotransferase class V domain llmg_0466 816879770506796959c10c8aa0f12c77 378 PIRSF PIRSF000524 1 377 9.8E-87 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 llmg_2538 d0b31acdf5862a55b9d9dff08047f533 107 Pfam PF04545 Sigma-70, region 4 43 91 8.4E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 llmg_2538 d0b31acdf5862a55b9d9dff08047f533 107 Gene3D G3DSA:1.10.10.10 18 98 1.1E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2538 d0b31acdf5862a55b9d9dff08047f533 107 SUPERFAMILY SSF88659 28 94 2.06E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 3 143 6.0E-20 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PIRSF PIRSF000102 1 303 1.1E-81 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 173 179 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 Gene3D G3DSA:3.90.110.10 147 302 1.6E-42 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 146 301 6.4E-18 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 Gene3D G3DSA:3.40.50.720 1 145 7.3E-38 T 14-10-2018 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 2.4E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 2.4E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PRINTS PR00086 L-lactate dehydrogenase signature 28 52 2.4E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 2.4E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 2.4E-26 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 SUPERFAMILY SSF51735 1 145 1.41E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0475 72d7aea703d4bd52b16bb25612d1939b 304 SUPERFAMILY SSF56327 144 301 1.07E-41 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 llmg_1666 e69ccf1b8a632f511e95a1d678a1303f 185 Pfam PF03729 Short repeat of unknown function (DUF308) 99 145 0.0065 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane llmg_1666 e69ccf1b8a632f511e95a1d678a1303f 185 Pfam PF03729 Short repeat of unknown function (DUF308) 15 87 1.2E-10 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane llmg_1666 e69ccf1b8a632f511e95a1d678a1303f 185 Pfam PF03729 Short repeat of unknown function (DUF308) 131 178 1.1E-5 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 110 9.1E-20 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 Gene3D G3DSA:3.40.50.1000 75 183 1.5E-87 T 14-10-2018 IPR023214 HAD superfamily llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 231 2.5E-37 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 Gene3D G3DSA:3.40.50.1000 8 249 1.5E-87 T 14-10-2018 IPR023214 HAD superfamily llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 6 255 2.9E-107 T 14-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 SUPERFAMILY SSF56784 6 255 1.82E-69 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1414 8fefb8d994b37188c0b9d29bcaff2b0c 257 Pfam PF13242 HAD-hyrolase-like 182 254 6.9E-20 T 14-10-2018 llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 9 73 2.3E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 Gene3D G3DSA:3.40.50.620 6 193 3.8E-61 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 Pfam PF01467 Cytidylyltransferase-like 11 166 2.7E-35 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 7 193 29.646 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 SUPERFAMILY SSF52374 6 195 2.73E-47 T 14-10-2018 llmg_1473 a0343e6aae2aafbe85a669e62c390e92 197 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 11 192 3.3E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 Gene3D G3DSA:2.40.10.10 43 238 7.3E-44 T 14-10-2018 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 PRINTS PR00839 V8 serine protease family signature 210 226 5.1E-10 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 PRINTS PR00839 V8 serine protease family signature 227 239 5.1E-10 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 PRINTS PR00839 V8 serine protease family signature 46 63 5.1E-10 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 PRINTS PR00839 V8 serine protease family signature 177 190 5.1E-10 T 14-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 Gene3D G3DSA:2.40.10.10 56 169 7.3E-44 T 14-10-2018 llmg_1200 8b5eda8355345642ccb738f509987a8e 275 SUPERFAMILY SSF50494 5 261 9.92E-27 T 14-10-2018 IPR009003 Peptidase S1, PA clan llmg_1200 8b5eda8355345642ccb738f509987a8e 275 Pfam PF13365 Trypsin-like peptidase domain 78 235 3.1E-10 T 14-10-2018 llmg_0864 c9083107f9405cc799145dad9b8c8d31 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 206 5.4E-55 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 llmg_0864 c9083107f9405cc799145dad9b8c8d31 213 SUPERFAMILY SSF51569 3 208 5.68E-58 T 14-10-2018 llmg_0864 c9083107f9405cc799145dad9b8c8d31 213 Pfam PF01081 KDPG and KHG aldolase 9 187 1.4E-44 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 llmg_0864 c9083107f9405cc799145dad9b8c8d31 213 Gene3D G3DSA:3.20.20.70 1 213 6.7E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 592 737 2.7E-29 T 14-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 Pfam PF01368 DHH family 84 228 1.4E-10 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 SUPERFAMILY SSF64182 58 434 7.59E-118 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 Gene3D G3DSA:3.10.310.30 321 437 1.8E-32 T 14-10-2018 llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 Pfam PF02272 DHHA1 domain 317 434 1.9E-21 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 30 554 1.3E-171 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 llmg_0606 0ad02f17b399181be3f4a83f79737c22 742 Gene3D G3DSA:3.90.1640.30 59 320 2.3E-91 T 14-10-2018 llmg_0145 d45a84419031fca36eb61a71982c91c9 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.253 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0145 d45a84419031fca36eb61a71982c91c9 44 Pfam PF00468 Ribosomal protein L34 1 44 5.8E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0145 d45a84419031fca36eb61a71982c91c9 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 27 1.0E-8 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0145 d45a84419031fca36eb61a71982c91c9 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0145 d45a84419031fca36eb61a71982c91c9 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.4E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1489 93d613afafdf70af57596e02e67e85fb 322 Pfam PF02562 PhoH-like protein 117 319 1.2E-93 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 llmg_1489 93d613afafdf70af57596e02e67e85fb 322 Gene3D G3DSA:3.40.50.300 114 320 3.8E-73 T 14-10-2018 llmg_1489 93d613afafdf70af57596e02e67e85fb 322 SUPERFAMILY SSF52540 42 297 3.76E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 2.3E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.2E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 4.2E-56 T 14-10-2018 llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 SUPERFAMILY SSF51735 1 242 3.66E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1762 c9dd3bc13c2e1f4a081d37bb721cd9a9 243 Gene3D G3DSA:3.40.50.720 1 242 1.4E-74 T 14-10-2018 llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 SUPERFAMILY SSF55608 107 213 3.51E-19 T 14-10-2018 IPR027434 Homing endonuclease llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 300 30.239 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 294 2.0E-91 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Pfam PF02650 WhiA C-terminal HTH domain 214 295 9.6E-32 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Gene3D G3DSA:1.10.10.10 210 302 2.9E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Pfam PF14527 WhiA LAGLIDADG-like domain 119 211 4.3E-29 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 97 2.2E-26 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain llmg_1555 549576dcfc316fee9f53ff210eeef91a 305 Gene3D G3DSA:3.10.28.10 1 209 3.4E-42 T 14-10-2018 IPR027434 Homing endonuclease llmg_1069 803875d40d30ae7402174ef0018551ae 111 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 103 2.6E-42 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like llmg_1069 803875d40d30ae7402174ef0018551ae 111 Gene3D G3DSA:1.10.10.10 1 110 1.2E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1069 803875d40d30ae7402174ef0018551ae 111 Hamap MF_00245 UPF0122 protein . 3 106 21.112 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like llmg_1069 803875d40d30ae7402174ef0018551ae 111 SUPERFAMILY SSF88659 2 101 5.79E-33 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Hamap MF_01113 DNA polymerase IV [dinB]. 11 363 37.269 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 SUPERFAMILY SSF56672 4 247 2.31E-91 T 14-10-2018 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 SUPERFAMILY SSF100879 251 353 1.22E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Gene3D G3DSA:2.30.40.20 22 84 1.3E-28 T 14-10-2018 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Pfam PF00817 impB/mucB/samB family 17 167 6.6E-52 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Gene3D G3DSA:3.30.70.270 85 177 6.1E-32 T 14-10-2018 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Gene3D G3DSA:1.10.150.20 178 241 7.5E-16 T 14-10-2018 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Pfam PF11798 IMS family HHH motif 179 209 3.4E-7 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Pfam PF11799 impB/mucB/samB family C-terminal domain 248 354 2.0E-16 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 llmg_2305 54f14529cbcb67da33943a74ab9bc501 364 Gene3D G3DSA:3.30.1490.100 253 360 1.3E-23 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Pfam PF00364 Biotin-requiring enzyme 5 75 5.2E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Pfam PF00364 Biotin-requiring enzyme 108 177 5.1E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Gene3D G3DSA:2.40.50.100 4 80 1.6E-26 T 14-10-2018 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Gene3D G3DSA:2.40.50.100 107 181 2.7E-25 T 14-10-2018 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 SUPERFAMILY SSF51230 106 196 3.8E-26 T 14-10-2018 IPR011053 Single hybrid motif llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Gene3D G3DSA:4.10.320.10 213 263 2.5E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 SUPERFAMILY SSF51230 2 93 9.03E-28 T 14-10-2018 IPR011053 Single hybrid motif llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Gene3D G3DSA:3.30.559.10 283 528 2.0E-76 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 299 528 1.2E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 Pfam PF02817 e3 binding domain 222 256 1.4E-9 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 SUPERFAMILY SSF47005 217 260 1.7E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 llmg_0072 d70948bd2ee065708d8bebbb7138e283 530 SUPERFAMILY SSF52777 290 528 4.18E-75 T 14-10-2018 llmg_1760 4f94b635284b373db08a535c9830a310 169 PIRSF PIRSF031501 1 169 1.5E-55 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 llmg_1760 4f94b635284b373db08a535c9830a310 169 Pfam PF06177 QueT transporter 9 161 6.1E-34 T 14-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 llmg_0887 a392908b1e2bc153f05224ec0681c819 305 SUPERFAMILY SSF161111 22 216 1.24E-47 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_0887 a392908b1e2bc153f05224ec0681c819 305 Gene3D G3DSA:1.20.1510.10 21 215 3.0E-40 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_0887 a392908b1e2bc153f05224ec0681c819 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 274 6.8E-60 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_0887 a392908b1e2bc153f05224ec0681c819 305 Pfam PF01545 Cation efflux family 27 215 6.7E-41 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 SMART SM00846 3 152 1.4E-83 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 Gene3D G3DSA:3.30.360.10 151 316 2.7E-139 T 14-10-2018 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 314 1.8E-60 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 SUPERFAMILY SSF51735 3 168 1.35E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 SUPERFAMILY SSF55347 151 314 3.57E-62 T 14-10-2018 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 Gene3D G3DSA:3.40.50.720 4 326 2.7E-139 T 14-10-2018 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 8.1E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 8.1E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 231 248 8.1E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 8.1E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 8.1E-27 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 2.7E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 1.1E-129 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2539 4e1eafc1e79bf994ffab631401c64ca0 336 PIRSF PIRSF000149 1 336 2.8E-113 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0608 6ae127d4aa7ed7c08e683f3142314110 188 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 81 2.0E-13 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 llmg_0608 6ae127d4aa7ed7c08e683f3142314110 188 Gene3D G3DSA:1.10.10.1250 2 82 1.6E-28 T 14-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily llmg_0608 6ae127d4aa7ed7c08e683f3142314110 188 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 185 16.032 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 llmg_0608 6ae127d4aa7ed7c08e683f3142314110 188 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 91 1.3E-31 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 llmg_1232 ba584007ecd975fd7dcf10a741a62dc3 96 Gene3D G3DSA:1.10.10.60 7 87 1.5E-9 T 14-10-2018 llmg_1232 ba584007ecd975fd7dcf10a741a62dc3 96 SUPERFAMILY SSF46689 1 93 1.68E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1232 ba584007ecd975fd7dcf10a741a62dc3 96 Pfam PF01527 Transposase 2 75 1.7E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_1564 ba584007ecd975fd7dcf10a741a62dc3 96 Gene3D G3DSA:1.10.10.60 7 87 1.5E-9 T 14-10-2018 llmg_1564 ba584007ecd975fd7dcf10a741a62dc3 96 SUPERFAMILY SSF46689 1 93 1.68E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1564 ba584007ecd975fd7dcf10a741a62dc3 96 Pfam PF01527 Transposase 2 75 1.7E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0552 546ee0e71281a295c085410655a19fbd 118 Gene3D G3DSA:3.10.180.10 3 116 6.2E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0552 546ee0e71281a295c085410655a19fbd 118 SUPERFAMILY SSF54593 2 116 1.16E-10 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 1.1E-35 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 Pfam PF00085 Thioredoxin 5 102 3.4E-29 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 PIRSF PIRSF000077 1 104 8.5E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 ProSitePatterns PS00194 Thioredoxin family active site. 20 38 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 Gene3D G3DSA:3.40.30.10 3 103 1.1E-32 T 14-10-2018 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 SUPERFAMILY SSF52833 4 102 6.37E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 PRINTS PR00421 Thioredoxin family signature 68 79 2.2E-7 T 14-10-2018 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 PRINTS PR00421 Thioredoxin family signature 27 36 2.2E-7 T 14-10-2018 llmg_0779 7372c8774c4be4de7dd0fb214c2d84d8 104 PRINTS PR00421 Thioredoxin family signature 19 27 2.2E-7 T 14-10-2018 llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 SUPERFAMILY SSF52540 4 232 5.57E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 272 5.9E-115 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 Pfam PF00005 ABC transporter 23 169 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 Gene3D G3DSA:3.40.50.300 1 276 6.1E-74 T 14-10-2018 llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0287 31d5355a15fa4fe5a383b221e1e53abd 277 SMART SM00382 32 217 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1374 08a81faa839c781483bb13353cdbb78e 216 Gene3D G3DSA:3.30.65.10 1 49 6.5E-7 T 14-10-2018 llmg_1374 08a81faa839c781483bb13353cdbb78e 216 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 6 39 1.5E-11 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 llmg_1374 08a81faa839c781483bb13353cdbb78e 216 SUPERFAMILY SSF57783 3 41 9.18E-11 T 14-10-2018 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 Gene3D G3DSA:3.30.420.40 9 261 6.9E-112 T 14-10-2018 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 270 458 2.8E-53 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 2.7E-84 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 370 390 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 SUPERFAMILY SSF53067 12 262 7.62E-96 T 14-10-2018 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 Hamap MF_00186 Glycerol kinase [glpK]. 11 505 55.754 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 Gene3D G3DSA:3.30.420.40 262 505 3.0E-84 T 14-10-2018 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 12 502 3.7E-219 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 SUPERFAMILY SSF53067 262 501 1.6E-77 T 14-10-2018 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 PIRSF PIRSF000538 11 505 1.0E-165 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 llmg_1099 8d76c4add25ef4a1bfbeb8b2469bbf08 505 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 143 155 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 llmg_2290 520d3ff2d2f7cde6a5df634642e6f020 312 SUPERFAMILY SSF53335 43 276 2.26E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2290 520d3ff2d2f7cde6a5df634642e6f020 312 Gene3D G3DSA:3.40.50.150 82 311 1.8E-29 T 14-10-2018 llmg_1572 9e0b7df2f85c106d2732acf75d5d7a3a 587 Gene3D G3DSA:3.50.50.60 1 130 1.0E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1572 9e0b7df2f85c106d2732acf75d5d7a3a 587 Gene3D G3DSA:3.50.50.60 163 356 1.6E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1572 9e0b7df2f85c106d2732acf75d5d7a3a 587 Gene3D G3DSA:3.50.50.60 449 534 3.5E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1572 9e0b7df2f85c106d2732acf75d5d7a3a 587 SUPERFAMILY SSF51905 26 276 1.31E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1572 9e0b7df2f85c106d2732acf75d5d7a3a 587 Pfam PF06100 MCRA family 23 517 2.1E-213 T 14-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 llmg_2313 985671361711d9043b8961eb6a197115 410 Gene3D G3DSA:1.10.3930.10 69 154 2.8E-147 T 14-10-2018 llmg_2313 985671361711d9043b8961eb6a197115 410 SUPERFAMILY SSF55909 2 410 5.5E-132 T 14-10-2018 llmg_2313 985671361711d9043b8961eb6a197115 410 Gene3D G3DSA:3.75.10.10 6 405 2.8E-147 T 14-10-2018 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 346 363 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 366 380 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 389 407 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 1.5E-51 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 Pfam PF02274 Amidinotransferase 19 407 2.0E-111 T 14-10-2018 llmg_2313 985671361711d9043b8961eb6a197115 410 TIGRFAM TIGR01078 arcA: arginine deiminase 5 409 1.5E-153 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 Hamap MF_00242 Arginine deiminase [arcA]. 2 410 46.211 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_2313 985671361711d9043b8961eb6a197115 410 PIRSF PIRSF006356 1 410 2.1E-149 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 llmg_0497 22e037c4dc5b7f2cd428416540a18ce9 165 SUPERFAMILY SSF55729 1 153 5.32E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0497 22e037c4dc5b7f2cd428416540a18ce9 165 Pfam PF00583 Acetyltransferase (GNAT) family 43 141 1.3E-13 T 14-10-2018 IPR000182 GNAT domain llmg_0497 22e037c4dc5b7f2cd428416540a18ce9 165 Gene3D G3DSA:3.40.630.30 5 164 1.2E-30 T 14-10-2018 llmg_1130 aa5224a4f4f419f5a4a04fd5a1c65b3b 124 Gene3D G3DSA:3.40.30.10 1 107 2.8E-30 T 14-10-2018 llmg_1130 aa5224a4f4f419f5a4a04fd5a1c65b3b 124 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 101 3.7E-24 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_1130 aa5224a4f4f419f5a4a04fd5a1c65b3b 124 SUPERFAMILY SSF52833 2 121 1.29E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1130 aa5224a4f4f419f5a4a04fd5a1c65b3b 124 Pfam PF03960 ArsC family 32 100 4.9E-21 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 8 209 9.6E-68 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 Pfam PF01259 SAICAR synthetase 11 233 6.8E-63 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 8 238 32.105 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 SUPERFAMILY SSF56104 9 236 5.23E-80 T 14-10-2018 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 Gene3D G3DSA:3.30.470.20 89 224 2.3E-93 T 14-10-2018 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 Gene3D G3DSA:3.30.200.20 11 234 2.3E-93 T 14-10-2018 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 ProSitePatterns PS01057 SAICAR synthetase signature 1. 90 104 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_0973 85a051d05c23e9d2f8307d081c33ca9c 240 ProSitePatterns PS01058 SAICAR synthetase signature 2. 177 185 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 56 3.9E-10 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Pfam PF13091 PLD-like domain 322 447 2.2E-24 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Pfam PF13091 PLD-like domain 134 277 5.5E-17 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 SUPERFAMILY SSF56024 102 313 7.63E-56 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 SMART SM00155 217 244 6.1E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 SMART SM00155 394 421 8.6E-8 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 SUPERFAMILY SSF56024 269 466 1.08E-44 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 10 481 2.1E-162 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Hamap MF_01916 Cardiolipin synthase. 8 481 41.615 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 PIRSF PIRSF000850 91 293 1.6E-4 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 PIRSF PIRSF000850 371 480 0.0076 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 PIRSF PIRSF000850 279 373 0.0063 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Gene3D G3DSA:3.30.870.10 301 480 7.5E-30 T 14-10-2018 llmg_1558 7a2b759785fc21dcd79e399bdf9e80ac 481 Gene3D G3DSA:3.30.870.10 113 300 1.1E-43 T 14-10-2018 llmg_1559 4e9d5180b286a97095bfa64583307005 229 SMART SM00100 21 138 1.4E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_1559 4e9d5180b286a97095bfa64583307005 229 Pfam PF13545 Crp-like helix-turn-helix domain 159 226 5.4E-17 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_1559 4e9d5180b286a97095bfa64583307005 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 8.0E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_1559 4e9d5180b286a97095bfa64583307005 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 8.0E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_1559 4e9d5180b286a97095bfa64583307005 229 SUPERFAMILY SSF46785 155 226 1.94E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1559 4e9d5180b286a97095bfa64583307005 229 Gene3D G3DSA:2.60.120.1460 26 227 4.4E-44 T 14-10-2018 llmg_1559 4e9d5180b286a97095bfa64583307005 229 SUPERFAMILY SSF51206 16 151 5.89E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like llmg_1559 4e9d5180b286a97095bfa64583307005 229 Pfam PF00027 Cyclic nucleotide-binding domain 40 123 7.7E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_1559 4e9d5180b286a97095bfa64583307005 229 SMART SM00419 172 220 1.2E-9 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 Pfam PF07690 Major Facilitator Superfamily 14 347 8.1E-59 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 SUPERFAMILY SSF103473 10 384 2.35E-73 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 132 154 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 160 180 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 331 354 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 271 292 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 PRINTS PR01035 Tetracycline resistance protein signature 243 263 1.7E-23 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0133 e4b1a5119798ea22a661445e186152e1 387 Gene3D G3DSA:1.20.1250.20 2 380 4.0E-72 T 14-10-2018 llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 SUPERFAMILY SSF75217 5 245 4.91E-98 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 235 8.9E-93 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 Gene3D G3DSA:3.40.1280.10 2 165 1.6E-65 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 223 8.6E-71 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 Gene3D G3DSA:1.10.1270.20 166 250 5.3E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 251 109.249 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 llmg_0937 5ce26abe866a637449d2d0d30c1ccbef 251 PIRSF PIRSF000386 5 250 1.2E-100 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 llmg_2037 16f2869d0bee0371833113cc07bd2e68 122 Pfam PF06279 Protein of unknown function (DUF1033) 1 117 7.6E-50 T 14-10-2018 IPR010434 Protein of unknown function DUF1033 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 TIGRFAM TIGR03107 glu_aminopep: glutamyl aminopeptidase 4 353 7.5E-194 T 14-10-2018 IPR017538 Peptidase M42, glutamyl aminopeptidase MetaCyc: PWY-5706|MetaCyc: PWY-5707|MetaCyc: PWY-7614 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 SUPERFAMILY SSF53187 2 349 6.99E-59 T 14-10-2018 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 Gene3D G3DSA:2.40.30.40 74 163 2.3E-100 T 14-10-2018 IPR023367 Peptidase M42, domain 2 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 SUPERFAMILY SSF101821 70 181 2.59E-24 T 14-10-2018 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 Pfam PF05343 M42 glutamyl aminopeptidase 44 334 1.7E-96 T 14-10-2018 IPR008007 Peptidase M42 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 Gene3D G3DSA:3.40.630.10 10 331 2.3E-100 T 14-10-2018 llmg_0403 1c8c785a4a4fa9b7604f0dfa4c4b9cfd 355 PIRSF PIRSF001123 1 355 9.2E-135 T 14-10-2018 IPR008007 Peptidase M42 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 Pfam PF01316 Arginine repressor, DNA binding domain 1 69 6.7E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 SUPERFAMILY SSF55252 81 147 1.7E-12 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 PRINTS PR01467 Bacterial arginine repressor signature 21 34 2.9E-11 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 PRINTS PR01467 Bacterial arginine repressor signature 118 133 2.9E-11 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 PRINTS PR01467 Bacterial arginine repressor signature 88 101 2.9E-11 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 PRINTS PR01467 Bacterial arginine repressor signature 37 52 2.9E-11 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 Hamap MF_00173 Arginine repressor [argR]. 1 148 40.376 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 2.6E-8 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 SUPERFAMILY SSF46785 1 69 1.97E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1686 7f82053eaf580fea7858b10b62c3a406 148 Gene3D G3DSA:1.10.10.10 1 64 5.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 SMART SM00829 13 296 0.0028 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 SUPERFAMILY SSF51735 117 285 1.08E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 114 1.3E-21 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 Pfam PF00107 Zinc-binding dehydrogenase 154 280 4.1E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 40 54 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 Gene3D G3DSA:3.90.180.10 1 316 6.0E-89 T 14-10-2018 llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 SUPERFAMILY SSF50129 1 152 2.13E-35 T 14-10-2018 IPR011032 GroES-like superfamily llmg_1642 4e4f2ab0c897a9bee32fd6b902cb5e8a 326 Gene3D G3DSA:3.40.50.720 131 266 6.0E-89 T 14-10-2018 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 Pfam PF00710 Asparaginase, N-terminal 3 189 1.5E-58 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 PRINTS PR00139 Asparaginase/glutaminase family signature 251 269 1.1E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.1E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 1.1E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 Gene3D G3DSA:3.40.50.40 205 320 6.9E-26 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 SMART SM00870 3 316 7.9E-135 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 Gene3D G3DSA:3.40.50.1170 1 204 5.5E-65 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 PIRSF PIRSF500176 1 322 4.3E-93 T 14-10-2018 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 SUPERFAMILY SSF53774 1 315 3.01E-98 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 79 89 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 PIRSF PIRSF001220 1 320 6.9E-95 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 llmg_1823 eb3d1d140a98a7da7d9984b632557cf2 322 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 Pfam PF04055 Radical SAM superfamily 11 173 2.9E-25 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 349 1.4E-109 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 Gene3D G3DSA:3.80.30.20 2 297 1.8E-100 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 SMART SM00729 5 221 5.6E-62 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 SUPERFAMILY SSF102114 2 373 7.85E-114 T 14-10-2018 llmg_1418 2b0b45f281421cfd5a666c47ec48bd27 379 Pfam PF06969 HemN C-terminal domain 298 362 1.4E-14 T 14-10-2018 IPR010723 HemN, C-terminal llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 SUPERFAMILY SSF103473 8 304 1.44E-26 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 SUPERFAMILY SSF103473 323 487 7.32E-9 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 Pfam PF00854 POT family 91 465 1.3E-96 T 14-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 14-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 8 493 4.3E-133 T 14-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 llmg_1865 5c021086edb8329443d3057e6c4b1bfa 497 Gene3D G3DSA:1.20.1250.20 2 497 3.2E-132 T 14-10-2018 llmg_1064 0da01200302353d2e2adcbb2d6084959 351 Gene3D G3DSA:3.40.50.2300 145 346 6.0E-100 T 14-10-2018 llmg_1064 0da01200302353d2e2adcbb2d6084959 351 Gene3D G3DSA:3.40.50.2300 41 315 6.0E-100 T 14-10-2018 llmg_1064 0da01200302353d2e2adcbb2d6084959 351 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 41 350 1.0E-72 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 llmg_1064 0da01200302353d2e2adcbb2d6084959 351 SUPERFAMILY SSF53822 51 305 7.36E-17 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_1178 32a9df697fad7b38d3ab50277e59740a 504 PIRSF PIRSF006060 2 476 9.3E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1178 32a9df697fad7b38d3ab50277e59740a 504 Gene3D G3DSA:1.20.1740.10 2 473 4.7E-32 T 14-10-2018 llmg_1178 32a9df697fad7b38d3ab50277e59740a 504 TIGRFAM TIGR00910 2A0307_GadC: glutamate:gamma-aminobutyrate antiporter 2 499 2.3E-302 T 14-10-2018 IPR004759 Glutamate:g-aminobutyrate antiporter GO:0006865|GO:0016021 llmg_1178 32a9df697fad7b38d3ab50277e59740a 504 Pfam PF13520 Amino acid permease 7 446 1.4E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1903 3c7c6e0587823d1a2cfaa281a8a17d2a 100 Gene3D G3DSA:1.10.10.10 1 100 2.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1903 3c7c6e0587823d1a2cfaa281a8a17d2a 100 Pfam PF01638 HxlR-like helix-turn-helix 14 99 5.4E-21 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type llmg_1903 3c7c6e0587823d1a2cfaa281a8a17d2a 100 SUPERFAMILY SSF46785 2 100 5.24E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 60 589 1.3E-154 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 501 1.3E-29 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 60 592 8.2E-144 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 Gene3D G3DSA:3.40.50.1000 283 540 2.7E-73 T 14-10-2018 IPR023214 HAD superfamily llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 Pfam PF00122 E1-E2 ATPase 112 281 6.0E-36 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 SUPERFAMILY SSF81665 65 574 1.1E-10 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 Gene3D G3DSA:3.40.1110.10 313 420 2.7E-73 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 571 1.7E-66 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 SUPERFAMILY SSF81653 113 210 1.57E-16 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 436 446 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 487 506 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 523 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 413 424 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 160 174 5.4E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 Gene3D G3DSA:2.70.150.20 104 215 2.9E-22 T 14-10-2018 llmg_0100 f38ea31ae1da7135ca42a96473677ddf 593 SUPERFAMILY SSF56784 301 587 1.65E-42 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 337 8.6E-78 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 Gene3D G3DSA:3.40.50.620 6 332 7.7E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 69 88 5.8E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 147 168 5.8E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 202 212 5.8E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 5.8E-25 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 SUPERFAMILY SSF52374 5 337 1.09E-79 T 14-10-2018 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 Pfam PF00579 tRNA synthetases class I (W and Y) 3 290 2.0E-59 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 338 35.113 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 llmg_0079 eff1d8e3ab15cf48dc646f5f26e199d1 341 Gene3D G3DSA:1.10.240.10 186 305 7.7E-109 T 14-10-2018 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 SMART SM00347 25 131 6.5E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 Pfam PF12802 MarR family 30 95 2.2E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 Gene3D G3DSA:1.10.10.10 2 142 4.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0966 b46fb84326545fa2e297d36a8880684d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 1.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.4E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0966 b46fb84326545fa2e297d36a8880684d 148 SUPERFAMILY SSF46785 8 140 4.38E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 32 268 2.4E-68 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 SUPERFAMILY SSF53335 14 269 1.94E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 Gene3D G3DSA:1.10.8.10 2 79 8.0E-10 T 14-10-2018 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 174 180 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 Gene3D G3DSA:3.40.50.150 80 270 1.6E-62 T 14-10-2018 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 270 40.642 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 Pfam PF05175 Methyltransferase small domain 101 183 4.9E-20 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 llmg_0560 d99c0d89e40804bc663654025e9d0a8f 270 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 21 267 1.7E-84 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 llmg_1273 6d36e1e9e117881d192d07791f91280d 282 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 75 278 2.2E-71 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 llmg_1273 6d36e1e9e117881d192d07791f91280d 282 Pfam PF02481 DNA recombination-mediator protein A 69 270 6.7E-73 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 llmg_1273 6d36e1e9e117881d192d07791f91280d 282 Gene3D G3DSA:3.40.50.450 1 282 4.1E-106 T 14-10-2018 llmg_1273 6d36e1e9e117881d192d07791f91280d 282 SUPERFAMILY SSF102405 75 278 1.95E-34 T 14-10-2018 llmg_1124 a204e2622bff98fd1b4863d3bbc036dd 271 PIRSF PIRSF018249 1 270 4.8E-76 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 llmg_1124 a204e2622bff98fd1b4863d3bbc036dd 271 Pfam PF13649 Methyltransferase domain 87 167 1.6E-11 T 14-10-2018 llmg_1124 a204e2622bff98fd1b4863d3bbc036dd 271 SUPERFAMILY SSF53335 6 203 5.02E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1124 a204e2622bff98fd1b4863d3bbc036dd 271 Gene3D G3DSA:3.40.50.150 5 271 2.1E-60 T 14-10-2018 llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 283 2.4E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 SMART SM00382 35 234 6.7E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 Gene3D G3DSA:3.40.50.300 4 333 2.4E-87 T 14-10-2018 llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 Pfam PF00005 ABC transporter 28 184 1.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 SUPERFAMILY SSF52540 6 256 5.76E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0697 fe127ab45763e67b4cf1395b50f92abc 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 2.4E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 llmg_0533 be714811ab63061d4349743d924038c4 151 Pfam PF00293 NUDIX domain 4 131 2.1E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_0533 be714811ab63061d4349743d924038c4 151 Gene3D G3DSA:3.90.79.10 1 148 2.8E-35 T 14-10-2018 llmg_0533 be714811ab63061d4349743d924038c4 151 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_0533 be714811ab63061d4349743d924038c4 151 SUPERFAMILY SSF55811 3 144 9.88E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_0533 be714811ab63061d4349743d924038c4 151 PRINTS PR00502 NUDIX hydrolase family signature 44 59 1.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0533 be714811ab63061d4349743d924038c4 151 PRINTS PR00502 NUDIX hydrolase family signature 30 44 1.5E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0538 19be0a46cb085b8fd5a4c2d0cf144ea4 151 Gene3D G3DSA:3.10.129.10 1 151 4.0E-47 T 14-10-2018 llmg_0538 19be0a46cb085b8fd5a4c2d0cf144ea4 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 7 145 29.729 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_0538 19be0a46cb085b8fd5a4c2d0cf144ea4 151 SUPERFAMILY SSF54637 10 143 1.7E-38 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_0538 19be0a46cb085b8fd5a4c2d0cf144ea4 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 142 8.5E-47 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_0538 19be0a46cb085b8fd5a4c2d0cf144ea4 151 Pfam PF07977 FabA-like domain 16 136 2.4E-29 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 PIRSF PIRSF000446 1 306 8.5E-104 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 SUPERFAMILY SSF55048 126 195 2.62E-15 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 288 2.1E-101 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 SUPERFAMILY SSF52151 4 303 1.1E-74 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 Gene3D G3DSA:3.40.366.10 5 282 5.0E-101 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 306 1.8E-43 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 Gene3D G3DSA:3.30.70.250 123 195 5.0E-101 T 14-10-2018 llmg_1785 a4f65fdce4937cb53e9f9910608c03f8 306 Pfam PF00698 Acyl transferase domain 6 287 2.1E-40 T 14-10-2018 IPR014043 Acyl transferase llmg_0365 45a3c3933a793805c4c46e5d1030f9b4 343 Gene3D G3DSA:1.10.3720.10 133 335 5.0E-20 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0365 45a3c3933a793805c4c46e5d1030f9b4 343 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 340 1.1E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0365 45a3c3933a793805c4c46e5d1030f9b4 343 SUPERFAMILY SSF161098 137 323 5.23E-27 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0365 45a3c3933a793805c4c46e5d1030f9b4 343 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 85 3.1E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 SUPERFAMILY SSF50447 624 705 1.92E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Gene3D G3DSA:3.40.50.300 445 621 1.6E-70 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 SUPERFAMILY SSF52540 440 624 1.71E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 ProSitePatterns PS01176 Initiation factor 2 signature. 901 923 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 SUPERFAMILY SSF50447 852 948 8.08E-27 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 3 49 1.7E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 371 418 4.1E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 SUPERFAMILY SSF52156 727 857 1.05E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Pfam PF00009 Elongation factor Tu GTP binding domain 453 611 1.2E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 PRINTS PR00449 Transforming protein P21 ras signature 451 472 1.2E-7 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 PRINTS PR00449 Transforming protein P21 ras signature 548 561 1.2E-7 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 PRINTS PR00449 Transforming protein P21 ras signature 490 512 1.2E-7 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 PRINTS PR00449 Transforming protein P21 ras signature 591 613 1.2E-7 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Gene3D G3DSA:2.40.30.10 852 949 3.3E-28 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 450 609 2.2E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 948 16.409 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Pfam PF11987 Translation-initiation factor 2 736 840 8.0E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 362 949 2.6E-240 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Gene3D G3DSA:2.40.30.10 622 739 2.1E-37 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Gene3D G3DSA:1.10.10.2480 3 69 5.5E-13 T 14-10-2018 llmg_1792 5c560db320fd51e9eeb3520b3237bf16 950 Gene3D G3DSA:3.40.50.10050 744 851 2.3E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily llmg_2172 ce92c293f33c51353106eab661054233 202 Pfam PF00881 Nitroreductase family 8 180 3.8E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_2172 ce92c293f33c51353106eab661054233 202 Gene3D G3DSA:3.40.109.10 1 202 1.7E-81 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_2172 ce92c293f33c51353106eab661054233 202 SUPERFAMILY SSF55469 1 200 7.72E-62 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0081 725cbc06f0d121bb7871d34cb8734df0 437 Gene3D G3DSA:1.20.1740.10 2 433 2.1E-65 T 14-10-2018 llmg_0081 725cbc06f0d121bb7871d34cb8734df0 437 PIRSF PIRSF006060 1 423 1.6E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0081 725cbc06f0d121bb7871d34cb8734df0 437 Pfam PF13520 Amino acid permease 8 378 9.7E-35 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 SMART SM00671 139 170 140.0 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 SMART SM00671 243 278 0.0072 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 SMART SM00671 171 206 5.9E-9 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 SMART SM00671 207 242 6.1E-4 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Pfam PF13936 Helix-turn-helix domain 4 47 2.5E-8 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 SUPERFAMILY SSF81901 142 287 3.92E-31 T 14-10-2018 llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Pfam PF08238 Sel1 repeat 147 170 56.0 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Pfam PF08238 Sel1 repeat 248 278 0.001 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Pfam PF08238 Sel1 repeat 208 242 7.4E-4 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Pfam PF08238 Sel1 repeat 172 206 9.1E-7 T 14-10-2018 IPR006597 Sel1-like repeat llmg_1507 33ab4f95ad76eeb00907ff609a583a7a 355 Gene3D G3DSA:1.25.40.10 7 298 5.1E-42 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_0271 3293bb57e596adf46d279384ed01ee9c 339 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 228 1.3E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 llmg_0271 3293bb57e596adf46d279384ed01ee9c 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 1.4E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 llmg_0271 3293bb57e596adf46d279384ed01ee9c 339 Gene3D G3DSA:3.30.360.10 127 335 3.0E-100 T 14-10-2018 llmg_0271 3293bb57e596adf46d279384ed01ee9c 339 Gene3D G3DSA:3.40.50.720 6 318 3.0E-100 T 14-10-2018 llmg_0271 3293bb57e596adf46d279384ed01ee9c 339 SUPERFAMILY SSF51735 2 206 5.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2176 f3712701d666ba444e42df67afc6089f 211 SUPERFAMILY SSF53271 5 209 9.05E-75 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_2176 f3712701d666ba444e42df67afc6089f 211 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 211 48.973 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 llmg_2176 f3712701d666ba444e42df67afc6089f 211 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 211 8.1E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 llmg_2176 f3712701d666ba444e42df67afc6089f 211 Pfam PF14681 Uracil phosphoribosyltransferase 6 210 3.8E-79 T 14-10-2018 llmg_2176 f3712701d666ba444e42df67afc6089f 211 Gene3D G3DSA:3.40.50.2020 1 211 8.5E-86 T 14-10-2018 llmg_2446 fa2696d4b76d78351eb14effc319c019 408 Gene3D G3DSA:1.20.1250.20 13 404 1.3E-38 T 14-10-2018 llmg_2446 fa2696d4b76d78351eb14effc319c019 408 SUPERFAMILY SSF103473 15 403 1.44E-42 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2446 fa2696d4b76d78351eb14effc319c019 408 Pfam PF07690 Major Facilitator Superfamily 17 354 1.1E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1038 5a0006933043ce2ee538c73e8b4bd5c2 264 Pfam PF00218 Indole-3-glycerol phosphate synthase 9 255 3.9E-89 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 llmg_1038 5a0006933043ce2ee538c73e8b4bd5c2 264 SUPERFAMILY SSF51366 7 255 3.65E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_1038 5a0006933043ce2ee538c73e8b4bd5c2 264 Gene3D G3DSA:3.20.20.70 2 260 1.0E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1038 5a0006933043ce2ee538c73e8b4bd5c2 264 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 7 257 31.955 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 llmg_1038 5a0006933043ce2ee538c73e8b4bd5c2 264 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 llmg_2401 ac69497352340165513b53d5aaa208a0 145 Gene3D G3DSA:1.10.10.10 1 145 4.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2401 ac69497352340165513b53d5aaa208a0 145 Pfam PF01047 MarR family 35 92 7.6E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_2401 ac69497352340165513b53d5aaa208a0 145 SMART SM00347 28 130 9.0E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_2401 ac69497352340165513b53d5aaa208a0 145 SUPERFAMILY SSF46785 6 142 1.57E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 SUPERFAMILY SSF51011 571 646 1.73E-5 T 14-10-2018 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Pfam PF00128 Alpha amylase, catalytic domain 188 275 2.2E-11 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 568 646 7.7E-9 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 SMART SM00642 168 531 5.3E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 SUPERFAMILY SSF51445 154 558 1.68E-82 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Gene3D G3DSA:3.20.20.80 9 553 1.3E-241 T 14-10-2018 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Gene3D G3DSA:2.60.40.10 45 146 1.3E-241 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 PIRSF PIRSF000463 3 646 6.1E-174 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 SUPERFAMILY SSF81296 43 135 1.33E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Gene3D G3DSA:2.60.40.1180 566 646 1.1E-10 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta llmg_0158 bba1542b5671b96ed00a1675cdb7617f 647 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 50 126 3.6E-15 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 llmg_0559 d181d0ba092af93b0d98379719eefa31 251 Gene3D G3DSA:3.40.109.10 7 251 1.9E-61 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0559 d181d0ba092af93b0d98379719eefa31 251 PIRSF PIRSF005426 6 251 4.1E-85 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 llmg_0559 d181d0ba092af93b0d98379719eefa31 251 SUPERFAMILY SSF55469 7 250 9.03E-64 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0559 d181d0ba092af93b0d98379719eefa31 251 Pfam PF00881 Nitroreductase family 19 165 7.1E-18 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 21 449 1.9E-164 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 Gene3D G3DSA:3.40.50.12780 1 356 1.8E-83 T 14-10-2018 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 SUPERFAMILY SSF56801 3 451 6.41E-104 T 14-10-2018 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 Pfam PF00501 AMP-binding enzyme 5 363 4.0E-59 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 1 451 38.861 T 14-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 Pfam PF13193 AMP-binding enzyme C-terminal domain 372 443 7.2E-17 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain llmg_1832 48ad839bda4ac8e927e61df9b286d6c2 451 Gene3D G3DSA:3.30.300.310 359 451 1.2E-28 T 14-10-2018 llmg_2428 d902ce69b7270a435767146f30bab608 576 Pfam PF06160 Septation ring formation regulator, EzrA 9 563 2.5E-174 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 llmg_2428 d902ce69b7270a435767146f30bab608 576 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 6 569 23.111 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 SUPERFAMILY SSF103263 1 387 4.32E-143 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 PIRSF PIRSF001456 1 380 5.5E-122 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 33.961 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 129 145 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 Gene3D G3DSA:3.60.150.10 1 388 1.6E-150 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 Pfam PF01264 Chorismate synthase 1 361 3.5E-114 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_1934 6fd5d4bbe72098303d158edfcc205e9f 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 2.3E-129 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 llmg_0734 99de2c37563f781b92e41dca7bfaed2e 206 Gene3D G3DSA:3.40.50.850 10 202 3.4E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_0734 99de2c37563f781b92e41dca7bfaed2e 206 Pfam PF00857 Isochorismatase family 21 174 5.6E-25 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 llmg_0734 99de2c37563f781b92e41dca7bfaed2e 206 SUPERFAMILY SSF52499 12 187 7.06E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.0E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 SUPERFAMILY SSF53901 2 323 5.56E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 324 5.5E-32 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 325 67.492 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 324 3.8E-103 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 llmg_1787 efa2feec4c3bf5104134768a3a57e15e 325 Gene3D G3DSA:3.40.47.10 1 325 1.4E-119 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0019 052b724cae309287975efc862a119136 422 Pfam PF11734 TilS substrate C-terminal domain 336 406 6.4E-10 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 llmg_0019 052b724cae309287975efc862a119136 422 SMART SM00977 336 406 6.8E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 llmg_0019 052b724cae309287975efc862a119136 422 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 23 196 4.7E-47 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 llmg_0019 052b724cae309287975efc862a119136 422 Gene3D G3DSA:3.40.50.620 10 225 6.8E-58 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0019 052b724cae309287975efc862a119136 422 Pfam PF01171 PP-loop family 23 193 2.0E-51 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 llmg_0019 052b724cae309287975efc862a119136 422 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 336 372 7.3E-11 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 llmg_0019 052b724cae309287975efc862a119136 422 SUPERFAMILY SSF52402 10 218 1.3E-50 T 14-10-2018 llmg_0019 052b724cae309287975efc862a119136 422 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 8 295 21.573 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 llmg_0019 052b724cae309287975efc862a119136 422 SUPERFAMILY SSF56037 332 408 4.97E-14 T 14-10-2018 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 Gene3D G3DSA:3.40.50.1980 30 232 1.2E-126 T 14-10-2018 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 Pfam PF00815 Histidinol dehydrogenase 21 428 2.2E-171 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 5.5E-93 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 427 1.8E-168 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 428 42.528 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 Gene3D G3DSA:3.40.50.1980 234 350 1.2E-126 T 14-10-2018 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 SUPERFAMILY SSF53720 13 428 4.32E-81 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 llmg_1295 a2d7917678c6064a52b8647f9ece32f7 435 PIRSF PIRSF000099 2 431 7.5E-170 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 llmg_0223 2241da1e870eb7f5f772d1430f23241e 344 Gene3D G3DSA:3.40.50.2000 156 325 8.2E-73 T 14-10-2018 llmg_0223 2241da1e870eb7f5f772d1430f23241e 344 PIRSF PIRSF007023 6 342 1.0E-70 T 14-10-2018 IPR016503 UDP-galactofuranosyltransferase GO:0016757 llmg_0223 2241da1e870eb7f5f772d1430f23241e 344 Gene3D G3DSA:3.40.50.2000 14 333 8.2E-73 T 14-10-2018 llmg_0223 2241da1e870eb7f5f772d1430f23241e 344 SUPERFAMILY SSF53756 84 329 1.31E-6 T 14-10-2018 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 14 350 3.9E-153 T 14-10-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0000309|GO:0009435 KEGG: 00760+2.7.7.1+2.7.1.22 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 SUPERFAMILY SSF52374 16 169 1.56E-17 T 14-10-2018 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 Gene3D G3DSA:3.40.50.300 180 353 4.5E-43 T 14-10-2018 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 PIRSF PIRSF004776 1 379 2.8E-159 T 14-10-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 16 50 2.2E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 Pfam PF13521 AAA domain 183 336 1.5E-19 T 14-10-2018 IPR038727 NadR/Ttd14, AAA domain llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 Gene3D G3DSA:3.40.50.620 13 179 8.3E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2241 72547509dedd952c490b1e0d3faa4a92 379 SUPERFAMILY SSF52540 175 335 3.69E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1020 5322519c89427a5b48ee2f3f909ab483 144 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 29 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1020 5322519c89427a5b48ee2f3f909ab483 144 SMART SM00422 4 73 5.2E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1020 5322519c89427a5b48ee2f3f909ab483 144 SUPERFAMILY SSF46955 4 118 5.49E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_1020 5322519c89427a5b48ee2f3f909ab483 144 Gene3D G3DSA:1.10.1660.10 2 133 3.7E-34 T 14-10-2018 llmg_1020 5322519c89427a5b48ee2f3f909ab483 144 Pfam PF13411 MerR HTH family regulatory protein 4 70 1.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 Gene3D G3DSA:1.10.287.890 189 268 7.8E-86 T 14-10-2018 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 Gene3D G3DSA:3.40.50.300 7 188 7.8E-86 T 14-10-2018 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 Gene3D G3DSA:1.10.20.140 117 177 7.8E-86 T 14-10-2018 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 SUPERFAMILY SSF52540 7 149 2.45E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 275 6.2E-75 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 Pfam PF01715 IPP transferase 39 271 2.7E-69 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 llmg_0591 c2b6d62bc5c4f78b4fa4d5ee9785a363 294 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 294 27.788 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 llmg_0249 1d487c4fe0b37a171a31ee209a6aa8c7 486 SUPERFAMILY SSF103473 6 481 2.09E-56 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0249 1d487c4fe0b37a171a31ee209a6aa8c7 486 Pfam PF07690 Major Facilitator Superfamily 14 402 1.0E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0249 1d487c4fe0b37a171a31ee209a6aa8c7 486 Gene3D G3DSA:1.20.1720.10 12 222 2.7E-38 T 14-10-2018 llmg_0249 1d487c4fe0b37a171a31ee209a6aa8c7 486 Gene3D G3DSA:1.20.1250.20 251 480 4.4E-13 T 14-10-2018 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 SMART SM01134 73 233 1.1E-60 T 14-10-2018 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 SUPERFAMILY SSF100950 74 230 1.4E-32 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 5.7E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.6E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.6E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 SMART SM00420 6 58 8.5E-12 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 SUPERFAMILY SSF46785 3 65 5.41E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1570 42e9100dc947f4bbd7a9f9b7448e373b 233 Pfam PF00455 DeoR C terminal sensor domain 75 230 2.5E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain llmg_1822 21f06b202141fb8528f3f17b8c541629 462 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 245 1.9E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_1822 21f06b202141fb8528f3f17b8c541629 462 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 296 409 3.2E-27 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 llmg_1822 21f06b202141fb8528f3f17b8c541629 462 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 272 1.5E-48 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1822 21f06b202141fb8528f3f17b8c541629 462 Gene3D G3DSA:3.30.1240.10 81 201 1.7E-59 T 14-10-2018 llmg_1822 21f06b202141fb8528f3f17b8c541629 462 PIRSF PIRSF037492 1 461 1.4E-244 T 14-10-2018 IPR017223 Predicted hydrolase of the HAD superfamily, SPs0319-type llmg_1822 21f06b202141fb8528f3f17b8c541629 462 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 272 6.8E-58 T 14-10-2018 llmg_1822 21f06b202141fb8528f3f17b8c541629 462 Gene3D G3DSA:3.40.50.1000 6 272 1.7E-59 T 14-10-2018 IPR023214 HAD superfamily llmg_1822 21f06b202141fb8528f3f17b8c541629 462 SUPERFAMILY SSF56784 1 273 4.91E-60 T 14-10-2018 IPR036412 HAD-like superfamily llmg_1822 21f06b202141fb8528f3f17b8c541629 462 Gene3D G3DSA:1.10.3420.10 287 456 8.2E-54 T 14-10-2018 IPR023292 NTP pyrophosphohydrolase-like domain superfamily llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 PRINTS PR00131 Glycosyl hydrolase family 1 signature 109 117 1.8E-12 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 PRINTS PR00131 Glycosyl hydrolase family 1 signature 133 144 1.8E-12 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 PRINTS PR00131 Glycosyl hydrolase family 1 signature 154 171 1.8E-12 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 PRINTS PR00131 Glycosyl hydrolase family 1 signature 178 190 1.8E-12 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 PRINTS PR00131 Glycosyl hydrolase family 1 signature 36 50 1.8E-12 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 Gene3D G3DSA:3.20.20.80 2 207 1.9E-49 T 14-10-2018 llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 SUPERFAMILY SSF51445 11 206 5.62E-52 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1004 f9c08b44b2fb4d26524d0fa804640511 225 Pfam PF00232 Glycosyl hydrolase family 1 11 205 8.8E-40 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0255 4d57b3647b9d64cb0f1edeb0841c229d 328 Gene3D G3DSA:3.40.50.10440 11 181 2.6E-61 T 14-10-2018 llmg_0255 4d57b3647b9d64cb0f1edeb0841c229d 328 Pfam PF02733 Dak1 domain 17 324 7.8E-90 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0255 4d57b3647b9d64cb0f1edeb0841c229d 328 TIGRFAM TIGR02362 dhaK1b: probable dihydroxyacetone kinase DhaK1b subunit 7 328 4.5E-138 T 14-10-2018 IPR012735 Dihydroxyacetone kinase DhaK, subunit 1b llmg_0255 4d57b3647b9d64cb0f1edeb0841c229d 328 SUPERFAMILY SSF82549 11 328 2.38E-103 T 14-10-2018 llmg_0255 4d57b3647b9d64cb0f1edeb0841c229d 328 Gene3D G3DSA:3.30.1180.20 182 328 3.4E-52 T 14-10-2018 llmg_1884 d6a65596be8b96db35a9f196721b49a9 177 Gene3D G3DSA:3.40.50.300 1 176 5.3E-15 T 14-10-2018 llmg_1884 d6a65596be8b96db35a9f196721b49a9 177 SUPERFAMILY SSF52540 1 131 3.38E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0282 6dfb1ced515d224e901fd440e6749f7a 199 Gene3D G3DSA:3.20.20.70 16 197 7.5E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0282 6dfb1ced515d224e901fd440e6749f7a 199 PIRSF PIRSF000368 9 183 9.5E-69 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 llmg_0282 6dfb1ced515d224e901fd440e6749f7a 199 SUPERFAMILY SSF102114 40 117 3.66E-9 T 14-10-2018 llmg_0282 6dfb1ced515d224e901fd440e6749f7a 199 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 19 168 2.5E-63 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 llmg_0282 6dfb1ced515d224e901fd440e6749f7a 199 Pfam PF13353 4Fe-4S single cluster domain 28 166 9.6E-54 T 14-10-2018 llmg_2253 4b52b00eac4c3a9eb369e62750992324 264 SMART SM00943 7 175 2.9E-28 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_2253 4b52b00eac4c3a9eb369e62750992324 264 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 7 174 8.0E-19 T 14-10-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal llmg_2253 4b52b00eac4c3a9eb369e62750992324 264 SUPERFAMILY SSF56747 5 162 2.22E-10 T 14-10-2018 llmg_2253 4b52b00eac4c3a9eb369e62750992324 264 SMART SM00942 201 264 2.0E-19 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_2253 4b52b00eac4c3a9eb369e62750992324 264 Pfam PF08708 Primase C terminal 1 (PriCT-1) 203 262 2.9E-10 T 14-10-2018 IPR014820 Primase, C-terminal 1 llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 SUPERFAMILY SSF55315 3 100 7.18E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 Gene3D G3DSA:3.40.1280.10 102 252 1.8E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 29 100 2.9E-14 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 SUPERFAMILY SSF75217 109 251 8.5E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 SMART SM00967 29 104 9.5E-14 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 Gene3D G3DSA:3.30.1330.30 3 101 9.6E-21 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_0570 270894519d68e3323c2c7cc6fd965a97 252 Pfam PF00588 SpoU rRNA Methylase family 112 250 4.7E-35 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 llmg_0246 6ae830b93d43c52ef3fe9883ab5fd0cc 292 SUPERFAMILY SSF51735 1 189 1.72E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0246 6ae830b93d43c52ef3fe9883ab5fd0cc 292 Gene3D G3DSA:3.40.50.720 2 290 1.8E-26 T 14-10-2018 llmg_0246 6ae830b93d43c52ef3fe9883ab5fd0cc 292 Pfam PF13460 NAD(P)H-binding 7 154 1.9E-11 T 14-10-2018 IPR016040 NAD(P)-binding domain llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 2.2E-36 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 Gene3D G3DSA:3.40.50.1000 1 171 5.8E-49 T 14-10-2018 IPR023214 HAD superfamily llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 PIRSF PIRSF004682 1 178 1.9E-48 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 Pfam PF13242 HAD-hyrolase-like 103 155 1.0E-9 T 14-10-2018 llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 SUPERFAMILY SSF56784 1 171 1.63E-34 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2345 208987d58fd3bff2ec99339e3fb8edd2 181 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 146 5.9E-31 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 368 2.0E-57 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 PRINTS PR00084 Mannitol dehydrogenase signature 117 130 4.0E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 4.0E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 PRINTS PR00084 Mannitol dehydrogenase signature 171 186 4.0E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 PRINTS PR00084 Mannitol dehydrogenase signature 153 166 4.0E-18 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 153 165 - T 14-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 Gene3D G3DSA:1.10.1040.10 208 386 7.9E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 381 40.359 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 Gene3D G3DSA:3.40.50.720 2 206 9.9E-71 T 14-10-2018 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 126 1.1E-24 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 SUPERFAMILY SSF51735 3 200 4.93E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0025 a97531bb2e89adcee969e10af9a70c8f 388 SUPERFAMILY SSF48179 205 365 1.26E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_1649 cd141233fc0f925d671d70242c90d732 332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 328 3.0E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1649 cd141233fc0f925d671d70242c90d732 332 Pfam PF07730 Histidine kinase 131 199 2.4E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 llmg_1649 cd141233fc0f925d671d70242c90d732 332 SUPERFAMILY SSF55874 211 326 1.44E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1649 cd141233fc0f925d671d70242c90d732 332 Gene3D G3DSA:3.30.565.10 197 329 2.3E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1649 cd141233fc0f925d671d70242c90d732 332 SMART SM00387 235 329 3.3E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1649 cd141233fc0f925d671d70242c90d732 332 PIRSF PIRSF037431 1 332 1.9E-114 T 14-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 llmg_1802 f2dfa4d1edafdfc8e298829748b5e563 607 Gene3D G3DSA:2.60.40.10 36 193 4.1E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1802 f2dfa4d1edafdfc8e298829748b5e563 607 Gene3D G3DSA:2.60.40.10 412 567 2.8E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 165 254 1.9E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 275 630 5.2E-111 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 SUPERFAMILY SSF55804 1 148 2.35E-42 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 SUPERFAMILY SSF52794 163 264 1.05E-36 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 164 246 2.7E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 Gene3D G3DSA:3.40.50.2300 152 264 1.2E-41 T 14-10-2018 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 Pfam PF02378 Phosphotransferase system, EIIC 290 578 1.3E-22 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 Gene3D G3DSA:3.40.930.10 1 151 2.5E-43 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 6.6E-42 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 llmg_1568 a1593e67dda343d46b0fe8aa45ebeca3 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 2.7E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain llmg_1676 d27bdf471efd623fc760c5f09fa9fb2c 505 Pfam PF02687 FtsX-like permease family 355 499 4.1E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 SMART SM00635 290 367 4.7E-22 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 Gene3D G3DSA:3.30.2320.10 153 241 1.1E-8 T 14-10-2018 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 SUPERFAMILY SSF49373 289 370 2.43E-17 T 14-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 Pfam PF02368 Bacterial Ig-like domain (group 2) 291 366 1.4E-17 T 14-10-2018 IPR003343 Bacterial Ig-like, group 2 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 Gene3D G3DSA:3.30.2400.10 70 261 1.1E-8 T 14-10-2018 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 SUPERFAMILY SSF56563 42 286 1.57E-20 T 14-10-2018 llmg_0836 5d272be9e9fa6be9bfb8b41e4cbc10c7 372 Gene3D G3DSA:2.60.40.1080 286 372 6.9E-25 T 14-10-2018 llmg_1015 0cc62e41938ee5ac888f01b32796aa93 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 411 9.1E-44 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_1015 0cc62e41938ee5ac888f01b32796aa93 459 Pfam PF01554 MatE 25 185 1.4E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_1015 0cc62e41938ee5ac888f01b32796aa93 459 Pfam PF01554 MatE 250 404 2.1E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_1015 0cc62e41938ee5ac888f01b32796aa93 459 PIRSF PIRSF006603 1 449 7.9E-66 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_1335 447aaf6ccf50d77bddb3baa5129aa5e6 166 Pfam PF00293 NUDIX domain 44 153 2.6E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_1335 447aaf6ccf50d77bddb3baa5129aa5e6 166 SUPERFAMILY SSF55811 40 156 1.49E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_1335 447aaf6ccf50d77bddb3baa5129aa5e6 166 ProSitePatterns PS00893 Nudix box signature. 73 94 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_1335 447aaf6ccf50d77bddb3baa5129aa5e6 166 Gene3D G3DSA:3.90.79.10 4 164 5.9E-26 T 14-10-2018 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 Gene3D G3DSA:3.40.50.1260 1 177 9.2E-74 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 Pfam PF00162 Phosphoglycerate kinase 6 387 3.5E-149 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 Gene3D G3DSA:3.40.50.1260 184 385 8.0E-83 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 397 39.9 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PIRSF PIRSF000724 1 398 1.9E-134 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 143 165 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 350 361 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 174 196 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 197 216 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 PRINTS PR00477 Phosphoglycerate kinase family signature 373 390 6.8E-91 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0253 75298b3b90b506aaf161741cc5c20d3e 398 SUPERFAMILY SSF53748 3 397 5.65E-144 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0571 beb6d04b1021de549a6b0840ce202819 129 SUPERFAMILY SSF51182 11 123 9.71E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily llmg_0571 beb6d04b1021de549a6b0840ce202819 129 Gene3D G3DSA:2.60.120.10 1 126 1.7E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_1336 8e731d0bac8151394ad5075e14dffd15 357 Pfam PF00809 Pterin binding enzyme 103 339 4.3E-47 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 llmg_1336 8e731d0bac8151394ad5075e14dffd15 357 Gene3D G3DSA:3.20.20.20 72 356 3.0E-64 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 llmg_1336 8e731d0bac8151394ad5075e14dffd15 357 SUPERFAMILY SSF51717 88 355 2.62E-63 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 llmg_1336 8e731d0bac8151394ad5075e14dffd15 357 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 100 353 2.5E-78 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 SUPERFAMILY SSF52402 5 141 3.85E-32 T 14-10-2018 llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 Gene3D G3DSA:3.40.50.620 2 141 5.4E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 Pfam PF00582 Universal stress protein family 5 140 3.4E-33 T 14-10-2018 IPR006016 UspA llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 PRINTS PR01438 Universal stress protein signature 101 113 2.1E-18 T 14-10-2018 IPR006015 Universal stress protein A llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 PRINTS PR01438 Universal stress protein signature 119 141 2.1E-18 T 14-10-2018 IPR006015 Universal stress protein A llmg_1080 8217869d94906b3d0e8c6de6ca1a4699 142 PRINTS PR01438 Universal stress protein signature 5 23 2.1E-18 T 14-10-2018 IPR006015 Universal stress protein A llmg_0252 beee1b73218b8369782af40974a5cc6f 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 14-10-2018 llmg_0252 beee1b73218b8369782af40974a5cc6f 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 260 7.5E-52 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_0252 beee1b73218b8369782af40974a5cc6f 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 260 1.2E-60 T 14-10-2018 llmg_0252 beee1b73218b8369782af40974a5cc6f 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 234 7.5E-50 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0252 beee1b73218b8369782af40974a5cc6f 270 Gene3D G3DSA:3.40.50.1000 5 259 1.2E-59 T 14-10-2018 IPR023214 HAD superfamily llmg_0252 beee1b73218b8369782af40974a5cc6f 270 Gene3D G3DSA:3.30.1240.10 80 191 1.2E-59 T 14-10-2018 llmg_0252 beee1b73218b8369782af40974a5cc6f 270 SUPERFAMILY SSF56784 1 265 3.54E-59 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2330 b9e711c494b0e2bceb0d67d2a5e15407 280 Gene3D G3DSA:3.40.190.10 122 232 4.5E-59 T 14-10-2018 llmg_2330 b9e711c494b0e2bceb0d67d2a5e15407 280 Gene3D G3DSA:3.40.190.10 43 267 4.5E-59 T 14-10-2018 llmg_2330 b9e711c494b0e2bceb0d67d2a5e15407 280 SMART SM00062 39 270 1.2E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_2330 b9e711c494b0e2bceb0d67d2a5e15407 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 40 269 5.8E-41 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_2330 b9e711c494b0e2bceb0d67d2a5e15407 280 SUPERFAMILY SSF53850 39 270 4.44E-39 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:1.10.150.20 657 801 1.1E-106 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SUPERFAMILY SSF53098 328 469 3.29E-27 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SUPERFAMILY SSF56672 473 877 3.0E-148 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:3.30.420.10 308 491 4.3E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SMART SM00279 181 216 4.2E-17 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SMART SM00475 5 270 1.8E-152 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:3.40.50.1010 7 286 1.8E-88 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:1.10.150.20 182 255 1.8E-88 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 671 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 691 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 2.3E-79 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 180 272 1.1E-31 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SMART SM00474 312 468 4.7E-16 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SUPERFAMILY SSF88723 4 178 6.38E-49 T 14-10-2018 IPR029060 PIN-like domain superfamily llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 178 1.4E-49 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 TIGRFAM TIGR00593 pola: DNA polymerase I 7 877 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SUPERFAMILY SSF47807 178 281 2.69E-33 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 SMART SM00482 634 841 3.5E-112 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Pfam PF00476 DNA polymerase family A 500 875 3.8E-153 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:1.20.1060.10 493 606 6.6E-40 T 14-10-2018 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2425 0d8eeb3beb20cd399bee9f23ace4da16 877 Gene3D G3DSA:3.30.70.370 612 873 1.1E-106 T 14-10-2018 llmg_1816 e441494dfefb9670737e21e1c0445455 654 Pfam PF02272 DHHA1 domain 519 646 2.1E-16 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 llmg_1816 e441494dfefb9670737e21e1c0445455 654 Gene3D G3DSA:3.90.1640.10 321 541 4.7E-43 T 14-10-2018 llmg_1816 e441494dfefb9670737e21e1c0445455 654 Gene3D G3DSA:3.10.310.30 559 653 3.6E-11 T 14-10-2018 llmg_1816 e441494dfefb9670737e21e1c0445455 654 Gene3D G3DSA:3.30.450.20 52 158 6.2E-10 T 14-10-2018 llmg_1816 e441494dfefb9670737e21e1c0445455 654 SUPERFAMILY SSF64182 337 641 2.62E-65 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily llmg_1816 e441494dfefb9670737e21e1c0445455 654 Pfam PF01368 DHH family 339 496 2.9E-18 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 llmg_1816 e441494dfefb9670737e21e1c0445455 654 PIRSF PIRSF026583 1 654 8.8E-241 T 14-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SUPERFAMILY SSF54106 319 363 4.97E-11 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SMART SM00257 244 287 2.2E-19 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SMART SM00257 394 437 7.7E-13 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SMART SM00257 320 363 2.4E-17 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 72 210 7.5E-20 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Gene3D G3DSA:4.10.80.30 117 142 1.6E-51 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Gene3D G3DSA:3.10.350.10 390 437 4.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Gene3D G3DSA:3.10.350.10 240 294 1.5E-21 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Gene3D G3DSA:3.10.350.10 316 369 1.1E-18 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Gene3D G3DSA:1.10.530.10 65 214 1.6E-51 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SUPERFAMILY SSF54106 394 436 2.75E-9 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Pfam PF01476 LysM domain 322 362 2.9E-14 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Pfam PF01476 LysM domain 245 286 3.4E-17 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 Pfam PF01476 LysM domain 395 436 2.0E-10 T 14-10-2018 IPR018392 LysM domain llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SUPERFAMILY SSF54106 243 287 2.62E-13 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 PRINTS PR01002 Flagellar protein FlgJ signature 84 102 2.6E-6 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 PRINTS PR01002 Flagellar protein FlgJ signature 60 83 2.6E-6 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 PRINTS PR01002 Flagellar protein FlgJ signature 191 209 2.6E-6 T 14-10-2018 llmg_0280 e67a3aa45808d2109c7a496ab76ab4b7 437 SMART SM00047 57 214 8.6E-79 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 Pfam PF08544 GHMP kinases C terminal 230 297 1.3E-13 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 PRINTS PR00959 Mevalonate kinase family signature 268 285 1.8E-18 T 14-10-2018 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 PRINTS PR00959 Mevalonate kinase family signature 95 117 1.8E-18 T 14-10-2018 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 PRINTS PR00959 Mevalonate kinase family signature 11 35 1.8E-18 T 14-10-2018 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 SUPERFAMILY SSF55060 174 307 7.2E-32 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 Pfam PF00288 GHMP kinases N terminal domain 91 152 4.8E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 Gene3D G3DSA:3.30.230.10 3 171 5.6E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 SUPERFAMILY SSF54211 8 189 2.88E-38 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 11 283 1.4E-90 T 14-10-2018 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168 llmg_0425 7e58212f2b6d7d541e4327b336107e0d 310 Gene3D G3DSA:3.30.70.890 173 310 9.6E-43 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 21.383 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 99 3.1E-29 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 SUPERFAMILY SSF82607 4 96 1.83E-30 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 Pfam PF02575 YbaB/EbfC DNA-binding family 8 97 7.7E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 Gene3D G3DSA:3.30.1310.10 1 99 8.8E-33 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily llmg_0128 96d735f528bf765a839ba7aaa06f657b 99 PIRSF PIRSF004555 1 99 2.1E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 596 795 1.1E-62 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 SUPERFAMILY SSF58104 159 283 1.12E-5 T 14-10-2018 llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 4 167 5.1E-65 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 532 557 5.1E-7 T 14-10-2018 IPR023908 xxxLxxG heptad repeat llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 241 267 2.2E-5 T 14-10-2018 IPR023908 xxxLxxG heptad repeat llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 475 501 3.2E-5 T 14-10-2018 IPR023908 xxxLxxG heptad repeat llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 255 278 3.1E-4 T 14-10-2018 IPR023908 xxxLxxG heptad repeat llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 Pfam PF12698 ABC-2 family transporter protein 13 190 2.2E-11 T 14-10-2018 llmg_1659 b7614ad242cb180ae0373647f34cb1ec 799 Pfam PF01061 ABC-2 type transporter 629 764 1.4E-9 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PIRSF PIRSF000097 110 278 4.8E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PIRSF PIRSF000097 1 115 2.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 Pfam PF00248 Aldo/keto reductase family 21 254 9.5E-44 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 Gene3D G3DSA:3.20.20.100 1 281 3.4E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PRINTS PR00069 Aldo-keto reductase signature 90 108 4.7E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PRINTS PR00069 Aldo-keto reductase signature 193 217 4.7E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PRINTS PR00069 Aldo-keto reductase signature 153 182 4.7E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PRINTS PR00069 Aldo-keto reductase signature 34 58 4.7E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 PRINTS PR00069 Aldo-keto reductase signature 119 136 4.7E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 llmg_1253 2e48e4a103f0e7f7e3e5d55e2879d395 285 SUPERFAMILY SSF51430 2 261 5.24E-81 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 Pfam PF01765 Ribosome recycling factor 20 183 2.0E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 Gene3D G3DSA:3.30.1360.40 31 105 3.9E-66 T 14-10-2018 llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 SUPERFAMILY SSF55194 3 183 3.53E-68 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 2.4E-67 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.92 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 llmg_2284 5f2877296d724930ffdc9ac97a8a4594 185 Gene3D G3DSA:1.10.132.20 12 182 3.9E-66 T 14-10-2018 llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 SMART SM00862 146 221 4.1E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 Gene3D G3DSA:3.40.50.2300 1 120 3.1E-34 T 14-10-2018 llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 Pfam PF00072 Response regulator receiver domain 4 113 1.1E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 SUPERFAMILY SSF52172 1 176 1.42E-35 T 14-10-2018 IPR011006 CheY-like superfamily llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 Gene3D G3DSA:1.10.10.10 121 222 2.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.6E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0747 1b7281ac4d281fc72a1c45d3f90bca4c 222 SMART SM00448 2 112 1.4E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 Gene3D G3DSA:1.10.10.10 2 146 8.7E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 Pfam PF01047 MarR family 36 92 7.5E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 SUPERFAMILY SSF46785 1 121 7.86E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1788 035bda2c6dc2a21167a89fc30bb56ef6 146 SMART SM00347 28 130 6.9E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_2453 8af71a616046e84217a879c94f62365d 110 SUPERFAMILY SSF46785 9 106 2.02E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2453 8af71a616046e84217a879c94f62365d 110 SMART SM00418 14 94 0.0032 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 llmg_2453 8af71a616046e84217a879c94f62365d 110 Pfam PF01638 HxlR-like helix-turn-helix 18 106 1.7E-34 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type llmg_2453 8af71a616046e84217a879c94f62365d 110 Gene3D G3DSA:1.10.10.10 3 110 2.6E-42 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2117 43bbd53da60836780dd997281cdda4fd 65 Pfam PF06563 Protein of unknown function (DUF1125) 16 65 6.0E-7 T 14-10-2018 IPR009503 Protein of unknown function DUF1125 llmg_1594 43c74cc64d84b1a462075072f521f31e 191 Gene3D G3DSA:3.90.1720.10 6 185 3.0E-49 T 14-10-2018 llmg_1594 43c74cc64d84b1a462075072f521f31e 191 SUPERFAMILY SSF54001 76 184 7.36E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_1594 43c74cc64d84b1a462075072f521f31e 191 Pfam PF00877 NlpC/P60 family 92 181 2.1E-25 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain llmg_1689 6402e84595ebacef86fe794a1eb3a531 301 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 221 233 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_1689 6402e84595ebacef86fe794a1eb3a531 301 Pfam PF00348 Polyprenyl synthetase 41 268 1.4E-52 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 llmg_1689 6402e84595ebacef86fe794a1eb3a531 301 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 91 107 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_1689 6402e84595ebacef86fe794a1eb3a531 301 Gene3D G3DSA:1.10.600.10 5 301 4.2E-90 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_1689 6402e84595ebacef86fe794a1eb3a531 301 SUPERFAMILY SSF48576 17 286 1.79E-76 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_2307 c7e522d80fe931762fee936af0224be5 497 Gene3D G3DSA:1.20.1740.10 3 471 5.8E-47 T 14-10-2018 llmg_2307 c7e522d80fe931762fee936af0224be5 497 PIRSF PIRSF006060 1 480 6.9E-43 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_2307 c7e522d80fe931762fee936af0224be5 497 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 482 4.3E-129 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 llmg_2307 c7e522d80fe931762fee936af0224be5 497 Pfam PF13520 Amino acid permease 9 424 6.3E-51 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0217 c0791ffbd4f17152a1e9335740a8431f 588 Pfam PF05045 Rhamnan synthesis protein F 35 527 1.3E-132 T 14-10-2018 IPR007739 Rhamnan synthesis F llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 SUPERFAMILY SSF51569 1 214 2.62E-84 T 14-10-2018 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 2.0E-87 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 Pfam PF01791 DeoC/LacD family aldolase 5 210 1.2E-18 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 PIRSF PIRSF001357 1 219 1.9E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 Gene3D G3DSA:3.20.20.70 1 220 9.4E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.757 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 llmg_1062 759b3fa109955f230231c3a5f2ac0cca 220 SMART SM01133 2 213 4.8E-101 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 6.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 6.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 6.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 6.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 Gene3D G3DSA:1.10.10.10 11 149 2.2E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 SMART SM00347 31 131 1.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 SUPERFAMILY SSF46785 14 150 9.54E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1818 9b144f5b0d98e02cbd2574490e749b08 160 Pfam PF13463 Winged helix DNA-binding domain 51 103 1.6E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0957 1ebfe05925e332b1008679067c65b5ba 216 Gene3D G3DSA:3.20.20.70 6 216 8.2E-67 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0957 1ebfe05925e332b1008679067c65b5ba 216 SUPERFAMILY SSF51366 4 215 4.95E-56 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_0957 1ebfe05925e332b1008679067c65b5ba 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 215 3.1E-65 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_0957 1ebfe05925e332b1008679067c65b5ba 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 197 8.9E-59 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 PRINTS PR00050 Cold shock protein signature 39 57 1.9E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 PRINTS PR00050 Cold shock protein signature 24 33 1.9E-11 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 SMART SM00357 3 66 4.2E-18 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 SUPERFAMILY SSF50249 1 64 2.3E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 Gene3D G3DSA:2.40.50.140 1 65 3.0E-20 T 14-10-2018 llmg_1255 c3043e6f479bb6bba52c3544f43a5c4f 66 PIRSF PIRSF002599 1 66 2.8E-20 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_2496 6bc9d72dccde3bedfab33917c018f739 125 Pfam PF07843 Protein of unknown function (DUF1634) 18 119 2.8E-31 T 14-10-2018 IPR012861 Protein of unknown function DUF1634 llmg_1798 863e9bed1e7066770f9ab136511dd07f 134 Pfam PF03788 LrgA family 15 106 3.4E-28 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 llmg_1021 d429144c11a87da8c9898f155dcf60c5 295 SUPERFAMILY SSF103481 42 146 9.94E-9 T 14-10-2018 llmg_1021 d429144c11a87da8c9898f155dcf60c5 295 Pfam PF00892 EamA-like transporter family 5 144 5.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 llmg_1021 d429144c11a87da8c9898f155dcf60c5 295 Pfam PF00892 EamA-like transporter family 157 290 7.1E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 llmg_1021 d429144c11a87da8c9898f155dcf60c5 295 SUPERFAMILY SSF103481 190 293 2.88E-10 T 14-10-2018 llmg_2346 e2dd53a414c46a190ce592b7b877e7dd 191 SUPERFAMILY SSF53697 5 182 5.31E-43 T 14-10-2018 llmg_2346 e2dd53a414c46a190ce592b7b877e7dd 191 Gene3D G3DSA:3.40.50.10490 2 186 6.7E-60 T 14-10-2018 llmg_2346 e2dd53a414c46a190ce592b7b877e7dd 191 Pfam PF13580 SIS domain 10 144 2.9E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1101 e3f1fc90f835538e57a9fa737a4b0409 261 Pfam PF04536 TPM domain 46 150 9.8E-21 T 14-10-2018 IPR007621 TPM domain llmg_1101 e3f1fc90f835538e57a9fa737a4b0409 261 Gene3D G3DSA:3.10.310.50 24 158 1.1E-16 T 14-10-2018 llmg_0267 592d4d08e9b3be2f0266ccbe8e53482f 137 SUPERFAMILY SSF160419 12 132 1.96E-15 T 14-10-2018 IPR036696 YdfO-like superfamily llmg_0267 592d4d08e9b3be2f0266ccbe8e53482f 137 Pfam PF07166 Protein of unknown function (DUF1398) 23 125 5.5E-6 T 14-10-2018 IPR009833 Uncharacterised protein DUF1398 llmg_2339 bc07115645de6c631e02ac8f7d93f39f 118 SUPERFAMILY SSF46785 4 100 1.28E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2339 bc07115645de6c631e02ac8f7d93f39f 118 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 1.5E-22 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal llmg_2339 bc07115645de6c631e02ac8f7d93f39f 118 Gene3D G3DSA:1.10.10.10 1 116 5.8E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Gene3D G3DSA:3.50.50.60 2 342 1.7E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 5.4E-18 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 5.4E-18 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 388 403 5.4E-18 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 5.4E-18 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 5.4E-18 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 309 3.6E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 SUPERFAMILY SSF51905 1 318 5.49E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 431 1.7E-17 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Gene3D G3DSA:3.50.50.60 114 441 1.7E-155 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Pfam PF00581 Rhodanese-like domain 456 546 6.6E-17 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.5E-21 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.5E-21 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.5E-21 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.5E-21 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 1.5E-21 T 14-10-2018 llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 SMART SM00450 454 550 6.4E-19 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 SUPERFAMILY SSF52821 437 546 7.07E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 Gene3D G3DSA:3.40.250.10 451 551 8.4E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1249 ef595b8b8fa54696c8a7553e8df35451 553 SUPERFAMILY SSF55424 325 446 4.3E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_0969 78fecc242a9a75898018921f9ae9f6fb 122 PIRSF PIRSF028498 1 121 8.7E-50 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 llmg_0969 78fecc242a9a75898018921f9ae9f6fb 122 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 5 111 1.2E-23 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 llmg_2248 a5f23b00c4160fa8d01cb1b341c0a9df 440 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 33 371 2.7E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 llmg_2248 a5f23b00c4160fa8d01cb1b341c0a9df 440 SUPERFAMILY SSF52540 4 381 5.87E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2248 a5f23b00c4160fa8d01cb1b341c0a9df 440 Gene3D G3DSA:3.40.50.300 4 391 5.2E-20 T 14-10-2018 llmg_1603 24a7ae2b01354dadf6a713b6f379967a 371 SUPERFAMILY SSF53756 68 368 6.91E-25 T 14-10-2018 llmg_1603 24a7ae2b01354dadf6a713b6f379967a 371 Gene3D G3DSA:3.40.50.11820 23 360 2.0E-60 T 14-10-2018 llmg_1603 24a7ae2b01354dadf6a713b6f379967a 371 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 15 366 8.9E-105 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 llmg_1603 24a7ae2b01354dadf6a713b6f379967a 371 Gene3D G3DSA:3.40.50.12580 179 353 2.0E-60 T 14-10-2018 llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 Pfam PF09186 Domain of unknown function (DUF1949) 137 192 1.1E-10 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 Gene3D G3DSA:3.30.230.30 1 129 1.6E-53 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 Pfam PF01205 Uncharacterized protein family UPF0029 16 121 1.4E-33 T 14-10-2018 IPR001498 Impact, N-terminal llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 SUPERFAMILY SSF54211 3 129 1.44E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 SUPERFAMILY SSF54980 134 198 4.46E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 4 199 1.3E-67 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal llmg_1482 f7d4413d42794365b92b892f1e55c1c9 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 76 105 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site llmg_0526 d2f3fcb9f6887a970bc5a1a5ba284a61 421 Pfam PF13240 zinc-ribbon domain 7 27 7.5E-8 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 Gene3D G3DSA:3.10.25.10 213 322 9.0E-32 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 316 8.5E-92 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 Pfam PF02911 Formyl transferase, C-terminal domain 209 311 7.3E-29 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 Pfam PF00551 Formyl transferase 5 185 1.2E-30 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 4 314 32.373 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 SUPERFAMILY SSF53328 1 208 2.62E-54 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 SUPERFAMILY SSF50486 210 315 1.16E-30 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 llmg_2147 6cbc5be7ddb16e83deb693602bf83ccd 323 Gene3D G3DSA:3.40.50.170 1 211 1.4E-66 T 14-10-2018 llmg_0867 042a5d194db6e9f87bc6305bbe4248ae 466 Pfam PF03611 PTS system sugar-specific permease component 12 411 6.7E-134 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 llmg_1419 10bad37b8fde7b326be9c189f119da27 175 SUPERFAMILY SSF110849 11 141 4.36E-25 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily llmg_1419 10bad37b8fde7b326be9c189f119da27 175 SMART SM00470 13 109 0.0013 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_1419 10bad37b8fde7b326be9c189f119da27 175 Pfam PF02195 ParB-like nuclease domain 15 94 1.4E-11 T 14-10-2018 IPR003115 ParB/Sulfiredoxin llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 SUPERFAMILY SSF53697 91 229 2.36E-27 T 14-10-2018 llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 70 3.0E-7 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 Gene3D G3DSA:3.40.50.10490 93 241 2.6E-29 T 14-10-2018 llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 Pfam PF01380 SIS domain 107 211 7.2E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 Gene3D G3DSA:1.10.10.10 6 72 3.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1462 5eded2af1a71210aa3fb38d6990d01ef 241 SUPERFAMILY SSF46689 9 69 9.85E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 Gene3D G3DSA:3.40.50.720 279 376 6.3E-17 T 14-10-2018 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 78 2.3E-17 T 14-10-2018 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 SUPERFAMILY SSF51971 6 371 8.71E-48 T 14-10-2018 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 Pfam PF03275 UDP-galactopyranose mutase 153 356 8.2E-83 T 14-10-2018 IPR015899 UDP-galactopyranose mutase, C-terminal GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 TIGRFAM TIGR00031 UDP-GALP_mutase: UDP-galactopyranose mutase 8 372 5.3E-130 T 14-10-2018 IPR004379 UDP-galactopyranose mutase GO:0008767 KEGG: 00052+5.4.99.9|KEGG: 00520+5.4.99.9|MetaCyc: PWY-6397|MetaCyc: PWY-7328|MetaCyc: PWY-7622 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 Gene3D G3DSA:3.40.50.720 129 278 5.9E-27 T 14-10-2018 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 SUPERFAMILY SSF54373 254 323 1.96E-22 T 14-10-2018 llmg_0224 661ed70a64fb4dfa73ca8c6d988678de 376 Gene3D G3DSA:3.40.50.720 7 103 1.2E-31 T 14-10-2018 llmg_0506 eea004d0ed40d14df5671dbace84505d 292 Gene3D G3DSA:2.10.270.10 30 127 2.7E-19 T 14-10-2018 llmg_0506 eea004d0ed40d14df5671dbace84505d 292 Gene3D G3DSA:3.90.1720.10 128 272 1.9E-20 T 14-10-2018 llmg_0506 eea004d0ed40d14df5671dbace84505d 292 Pfam PF00877 NlpC/P60 family 164 273 3.5E-14 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain llmg_0506 eea004d0ed40d14df5671dbace84505d 292 SUPERFAMILY SSF69360 51 125 1.44E-17 T 14-10-2018 llmg_0506 eea004d0ed40d14df5671dbace84505d 292 Pfam PF01473 Putative cell wall binding repeat 69 84 0.0081 T 14-10-2018 IPR018337 Cell wall/choline-binding repeat llmg_0506 eea004d0ed40d14df5671dbace84505d 292 SUPERFAMILY SSF54001 142 282 3.92E-18 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_2455 b65703478b22e261051191c4a7d21b97 880 Gene3D G3DSA:1.10.730.10 7 744 2.1E-296 T 14-10-2018 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 560 1.5E-212 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2455 b65703478b22e261051191c4a7d21b97 880 SUPERFAMILY SSF46589 813 877 1.05E-16 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 llmg_2455 b65703478b22e261051191c4a7d21b97 880 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 1.4E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 1.4E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 1.4E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 1.4E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 1.4E-36 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 SUPERFAMILY SSF50677 193 343 3.66E-60 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 878 15.566 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Gene3D G3DSA:3.90.740.10 178 344 2.1E-296 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Gene3D G3DSA:1.10.287.380 806 878 5.5E-21 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 llmg_2455 b65703478b22e261051191c4a7d21b97 880 SUPERFAMILY SSF47323 571 828 1.03E-65 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Gene3D G3DSA:3.40.50.620 25 521 2.1E-296 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2455 b65703478b22e261051191c4a7d21b97 880 SUPERFAMILY SSF52374 5 570 3.29E-140 T 14-10-2018 llmg_2455 b65703478b22e261051191c4a7d21b97 880 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 860 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 813 878 1.1E-19 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 llmg_2455 b65703478b22e261051191c4a7d21b97 880 Pfam PF08264 Anticodon-binding domain of tRNA 610 754 5.9E-42 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 181 2.2E-26 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 101 1.5E-30 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 7.0E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 2 185 25.8 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 SUPERFAMILY SSF69754 3 111 8.24E-31 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 Gene3D G3DSA:3.30.505.50 139 185 1.3E-24 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily llmg_0616 7fdf12f3a88f0e11f64f4a99910d96f8 185 Gene3D G3DSA:3.30.160.100 2 102 2.1E-30 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 Gene3D G3DSA:3.40.50.10170 312 467 7.4E-41 T 14-10-2018 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 Pfam PF02734 DAK2 domain 35 197 9.0E-27 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 SUPERFAMILY SSF101473 8 199 1.96E-34 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 Gene3D G3DSA:3.30.1180.10 468 594 1.1E-14 T 14-10-2018 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 SMART SM01120 35 198 1.5E-35 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 317 591 9.2E-65 T 14-10-2018 IPR003797 DegV llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 Pfam PF02645 Uncharacterised protein, DegV family COG1307 316 591 4.4E-53 T 14-10-2018 IPR003797 DegV llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 SMART SM01121 234 582 1.3E-7 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 Gene3D G3DSA:1.25.40.340 5 192 9.8E-8 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_1301 4c25c532b8a76b26bfa739dc26a4eb88 598 SUPERFAMILY SSF82549 316 595 1.41E-62 T 14-10-2018 llmg_1188 248575ee0e8d3f5266aaaea97c48ea7b 201 Hamap MF_01405 dITP/XTP pyrophosphatase. 3 197 45.692 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 llmg_1188 248575ee0e8d3f5266aaaea97c48ea7b 201 Pfam PF01725 Ham1 family 5 193 2.2E-55 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 llmg_1188 248575ee0e8d3f5266aaaea97c48ea7b 201 SUPERFAMILY SSF52972 4 197 7.33E-63 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like llmg_1188 248575ee0e8d3f5266aaaea97c48ea7b 201 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 5 195 7.4E-56 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 llmg_1188 248575ee0e8d3f5266aaaea97c48ea7b 201 Gene3D G3DSA:3.90.950.10 1 197 8.9E-68 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 222 8.4E-64 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 Gene3D G3DSA:3.40.140.10 102 224 3.3E-37 T 14-10-2018 llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 Pfam PF12826 Helix-hairpin-helix motif 47 83 2.8E-6 T 14-10-2018 llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 174 179 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 Pfam PF04002 RadC-like JAB domain 114 222 4.4E-37 T 14-10-2018 IPR025657 RadC-like JAB domain llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 Gene3D G3DSA:1.10.150.20 46 89 3.7E-9 T 14-10-2018 llmg_1515 b0a535be8b9347fa0681a7aaacb8fc8a 227 SUPERFAMILY SSF47781 18 92 6.04E-11 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_0315 c16ad594d9ef4286576a86005171f364 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 264 9.8E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0315 c16ad594d9ef4286576a86005171f364 269 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 14 266 2.1E-75 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 llmg_0315 c16ad594d9ef4286576a86005171f364 269 SUPERFAMILY SSF161098 72 259 1.57E-32 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0315 c16ad594d9ef4286576a86005171f364 269 Gene3D G3DSA:1.10.3720.10 70 269 8.9E-31 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 SUPERFAMILY SSF53167 3 232 3.8E-86 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 230 4.1E-90 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 233 46.101 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 Pfam PF01048 Phosphorylase superfamily 17 215 1.7E-38 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1599 f782c90441472fb20d0c734edd9ab8e7 234 Gene3D G3DSA:3.40.50.1580 3 233 2.1E-69 T 14-10-2018 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Gene3D G3DSA:1.25.40.10 133 201 3.4E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Pfam PF13424 Tetratricopeptide repeat 138 201 1.9E-7 T 14-10-2018 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Pfam PF13176 Tetratricopeptide repeat 102 132 0.0063 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Gene3D G3DSA:1.25.40.10 9 132 9.6E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 SUPERFAMILY SSF48452 243 412 2.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 SUPERFAMILY SSF48452 35 268 1.52E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Pfam PF13432 Tetratricopeptide repeat 37 91 0.018 T 14-10-2018 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 SMART SM00028 66 98 69.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 SMART SM00028 170 203 0.013 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 SMART SM00028 100 133 12.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 llmg_1310 fd21e5f265e2500df65d9050f014a68e 418 Gene3D G3DSA:1.25.40.10 202 416 2.5E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 219 2.5E-21 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Gene3D G3DSA:1.10.150.20 236 312 1.5E-26 T 14-10-2018 llmg_2354 7a12248aa3321607f688d3143b930c39 312 SUPERFAMILY SSF55257 5 224 9.03E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 34.261 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 54 150 3.6E-22 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 251 309 1.0E-25 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 SUPERFAMILY SSF56553 48 169 3.27E-38 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 18 310 6.1E-109 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Gene3D G3DSA:2.170.120.12 48 168 4.2E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Gene3D G3DSA:3.30.1360.10 17 219 4.2E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 SUPERFAMILY SSF47789 246 310 5.62E-20 T 14-10-2018 llmg_2354 7a12248aa3321607f688d3143b930c39 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 303 1.1E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_2354 7a12248aa3321607f688d3143b930c39 312 SMART SM00662 18 225 5.2E-97 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 llmg_0738 f9e21a039b926836ce69ac18eb590b26 460 Gene3D G3DSA:1.10.3720.10 216 456 9.1E-54 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0738 f9e21a039b926836ce69ac18eb590b26 460 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 243 449 2.5E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0738 f9e21a039b926836ce69ac18eb590b26 460 SUPERFAMILY SSF160964 113 199 4.45E-5 T 14-10-2018 llmg_0738 f9e21a039b926836ce69ac18eb590b26 460 SUPERFAMILY SSF161098 207 446 5.23E-45 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0277 74042d752707913103f6c96b26803215 170 SUPERFAMILY SSF52499 1 168 1.83E-30 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_0277 74042d752707913103f6c96b26803215 170 Pfam PF00857 Isochorismatase family 4 163 5.0E-25 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 llmg_0277 74042d752707913103f6c96b26803215 170 Gene3D G3DSA:3.40.50.850 1 170 5.5E-32 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_0421 4669217532f8aa3bd2331b234576d200 270 Pfam PF01061 ABC-2 type transporter 24 232 9.2E-24 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_0421 4669217532f8aa3bd2331b234576d200 270 PIRSF PIRSF006648 1 270 7.0E-63 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 Gene3D G3DSA:3.90.1150.10 247 380 2.2E-56 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 Gene3D G3DSA:3.40.640.10 3 246 2.4E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 PIRSF PIRSF001434 1 380 6.1E-150 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 378 7.7E-161 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 SUPERFAMILY SSF53383 6 379 1.75E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1776 b6530e78a3121801cb4f9a7f77686913 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_0388 b99a17fa5e123a996b2ec86f40913ea5 325 Pfam PF02424 ApbE family 20 280 1.1E-63 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 llmg_0388 b99a17fa5e123a996b2ec86f40913ea5 325 PIRSF PIRSF006268 2 320 2.3E-85 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 llmg_0388 b99a17fa5e123a996b2ec86f40913ea5 325 Gene3D G3DSA:3.10.520.20 5 325 5.3E-80 T 14-10-2018 llmg_0388 b99a17fa5e123a996b2ec86f40913ea5 325 SUPERFAMILY SSF143631 12 304 4.97E-75 T 14-10-2018 IPR003374 ApbE-like superfamily llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 Pfam PF00742 Homoserine dehydrogenase 138 316 3.2E-59 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 Gene3D G3DSA:3.30.360.10 137 344 1.7E-128 T 14-10-2018 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 PIRSF PIRSF000098 1 428 1.3E-160 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 9 130 5.9E-17 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 SUPERFAMILY SSF51735 3 159 1.89E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 Gene3D G3DSA:3.30.70.260 345 412 1.7E-128 T 14-10-2018 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 Gene3D G3DSA:3.40.50.720 3 337 1.7E-128 T 14-10-2018 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 SUPERFAMILY SSF55347 138 303 3.99E-50 T 14-10-2018 llmg_1332 f5ece580e0ccf63990017fb7ff919723 428 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 184 206 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 llmg_1450 1be946f018c622674579f87afc4032d4 361 Pfam PF02424 ApbE family 45 327 4.1E-68 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 llmg_1450 1be946f018c622674579f87afc4032d4 361 SUPERFAMILY SSF143631 42 344 6.8E-78 T 14-10-2018 IPR003374 ApbE-like superfamily llmg_1450 1be946f018c622674579f87afc4032d4 361 PIRSF PIRSF006268 1 349 3.2E-90 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 llmg_1450 1be946f018c622674579f87afc4032d4 361 Gene3D G3DSA:3.10.520.20 33 355 7.7E-92 T 14-10-2018 llmg_1808 db19a836b07808e8a2ee5e3aa57ea391 293 SUPERFAMILY SSF52540 116 266 1.19E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1808 db19a836b07808e8a2ee5e3aa57ea391 293 Gene3D G3DSA:3.40.50.300 98 285 2.9E-44 T 14-10-2018 llmg_1808 db19a836b07808e8a2ee5e3aa57ea391 293 Pfam PF01695 IstB-like ATP binding protein 146 264 3.6E-11 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 llmg_1808 db19a836b07808e8a2ee5e3aa57ea391 293 Pfam PF07319 Primosomal protein DnaI N-terminus 1 88 8.7E-27 T 14-10-2018 IPR009928 Primosomal DnaI, N-terminal llmg_0624 4d8c6b42b480b624fff889c6ec219537 223 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0624 4d8c6b42b480b624fff889c6ec219537 223 SUPERFAMILY SSF52540 4 220 4.48E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0624 4d8c6b42b480b624fff889c6ec219537 223 Pfam PF00005 ABC transporter 24 171 6.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0624 4d8c6b42b480b624fff889c6ec219537 223 SMART SM00382 33 219 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0624 4d8c6b42b480b624fff889c6ec219537 223 Gene3D G3DSA:3.40.50.300 1 222 8.8E-61 T 14-10-2018 llmg_1129 e41da25e3b8c6e3c225aae0e93e74a8e 191 Gene3D G3DSA:2.60.40.10 41 122 1.9E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1129 e41da25e3b8c6e3c225aae0e93e74a8e 191 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 154 187 1.0E-8 T 14-10-2018 llmg_0197 9abe0099755f1ad38fc879cbe33537ed 301 Pfam PF01040 UbiA prenyltransferase family 18 270 2.0E-22 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 llmg_0197 9abe0099755f1ad38fc879cbe33537ed 301 PIRSF PIRSF005355 1 300 2.2E-36 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 llmg_1049 727f17349326dccf361fa962eb66c7f1 573 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 321 562 9.7E-63 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 llmg_1049 727f17349326dccf361fa962eb66c7f1 573 Gene3D G3DSA:3.40.190.10 329 572 1.6E-93 T 14-10-2018 llmg_1049 727f17349326dccf361fa962eb66c7f1 573 Gene3D G3DSA:3.40.190.100 402 500 1.6E-93 T 14-10-2018 llmg_1049 727f17349326dccf361fa962eb66c7f1 573 SUPERFAMILY SSF53850 319 572 6.15E-79 T 14-10-2018 llmg_1049 727f17349326dccf361fa962eb66c7f1 573 SUPERFAMILY SSF161098 88 275 3.01E-37 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1049 727f17349326dccf361fa962eb66c7f1 573 Gene3D G3DSA:1.10.3720.10 83 277 6.7E-33 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1049 727f17349326dccf361fa962eb66c7f1 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 272 1.9E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0041 55de1e3439741f08b047a227154e91c1 140 SMART SM00530 11 66 7.7E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0041 55de1e3439741f08b047a227154e91c1 140 SUPERFAMILY SSF47413 7 72 8.58E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0041 55de1e3439741f08b047a227154e91c1 140 Pfam PF01381 Helix-turn-helix 15 65 9.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0041 55de1e3439741f08b047a227154e91c1 140 Gene3D G3DSA:1.10.260.40 5 97 5.6E-16 T 14-10-2018 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 150 178 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Gene3D G3DSA:3.30.70.250 3 104 4.6E-11 T 14-10-2018 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 185 220 1.5E-10 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 194 222 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Gene3D G3DSA:2.160.10.10 105 256 2.8E-46 T 14-10-2018 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 7 106 2.5E-15 T 14-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 SUPERFAMILY SSF51161 108 243 2.09E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 142 176 1.1E-9 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 138 1.2E-4 T 14-10-2018 IPR001451 Hexapeptide repeat llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 3 255 43.405 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 llmg_0291 9cd5df4e08c3ffcb37d69db779e4e4f0 256 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 256 2.2E-100 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 llmg_1980 43d73485cb0ad046978caa3a947f1635 302 SUPERFAMILY SSF111331 1 297 1.59E-53 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily llmg_1980 43d73485cb0ad046978caa3a947f1635 302 Gene3D G3DSA:2.60.200.40 131 287 5.3E-29 T 14-10-2018 llmg_1980 43d73485cb0ad046978caa3a947f1635 302 Gene3D G3DSA:3.40.50.10330 2 129 2.2E-24 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 llmg_1980 43d73485cb0ad046978caa3a947f1635 302 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 283 7.8E-36 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase llmg_1980 43d73485cb0ad046978caa3a947f1635 302 SMART SM00046 2 133 0.0011 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_1980 43d73485cb0ad046978caa3a947f1635 302 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 123 2.0E-24 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_0754 184413fd1eea04864a38140247642cef 277 SUPERFAMILY SSF47413 6 63 2.9E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0754 184413fd1eea04864a38140247642cef 277 Pfam PF12844 Helix-turn-helix domain 7 61 3.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0754 184413fd1eea04864a38140247642cef 277 Gene3D G3DSA:1.10.260.40 6 112 8.5E-7 T 14-10-2018 llmg_0754 184413fd1eea04864a38140247642cef 277 SMART SM00530 9 63 7.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0754 184413fd1eea04864a38140247642cef 277 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 65 273 1.5E-58 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_0640 03b6f36608c113daa1debba341725181 132 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.1E-31 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_0640 03b6f36608c113daa1debba341725181 132 SUPERFAMILY SSF52833 1 122 1.01E-34 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0640 03b6f36608c113daa1debba341725181 132 Pfam PF03960 ArsC family 9 113 3.0E-22 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_0640 03b6f36608c113daa1debba341725181 132 Gene3D G3DSA:3.40.30.10 1 120 1.1E-41 T 14-10-2018 llmg_1593 bb9711566fc5055413eb16018e9ee76e 282 SUPERFAMILY SSF53850 36 276 8.77E-43 T 14-10-2018 llmg_1593 bb9711566fc5055413eb16018e9ee76e 282 Gene3D G3DSA:3.40.190.10 41 269 2.9E-65 T 14-10-2018 llmg_1593 bb9711566fc5055413eb16018e9ee76e 282 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 38 271 6.2E-45 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1593 bb9711566fc5055413eb16018e9ee76e 282 Gene3D G3DSA:3.40.190.10 121 232 2.9E-65 T 14-10-2018 llmg_1593 bb9711566fc5055413eb16018e9ee76e 282 SMART SM00062 37 273 1.7E-39 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_0618 b369af10c756d982d00c0adba87e12e1 311 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 7 91 3.9E-8 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_0618 b369af10c756d982d00c0adba87e12e1 311 SUPERFAMILY SSF56349 2 292 1.15E-43 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_0618 b369af10c756d982d00c0adba87e12e1 311 Pfam PF00589 Phage integrase family 115 292 8.1E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0618 b369af10c756d982d00c0adba87e12e1 311 Gene3D G3DSA:1.10.150.130 1 110 7.6E-14 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_0618 b369af10c756d982d00c0adba87e12e1 311 Gene3D G3DSA:1.10.443.10 112 299 1.9E-36 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 Gene3D G3DSA:3.90.1150.10 4 368 3.7E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 5 377 2.4E-130 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 PIRSF PIRSF000521 108 148 2.1E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 PIRSF PIRSF000521 9 113 4.6E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 PIRSF PIRSF000521 154 377 9.4E-38 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 203 240 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 Gene3D G3DSA:3.40.640.10 47 286 3.7E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 SUPERFAMILY SSF53383 4 377 1.2E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 377 64.683 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 llmg_1756 1e41d89923729fcfbe82c4abdc85050d 377 Pfam PF00202 Aminotransferase class-III 12 377 1.5E-104 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 llmg_0147 2da338280c1d65a52a3452b5ac386dd5 86 Gene3D G3DSA:1.10.260.40 39 86 6.0E-10 T 14-10-2018 llmg_0147 2da338280c1d65a52a3452b5ac386dd5 86 SUPERFAMILY SSF47413 42 85 8.73E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0147 2da338280c1d65a52a3452b5ac386dd5 86 Pfam PF13560 Helix-turn-helix domain 41 81 3.5E-6 T 14-10-2018 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.431 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 SUPERFAMILY SSF47648 1 67 2.88E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 Gene3D G3DSA:1.20.970.10 3 67 1.1E-20 T 14-10-2018 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 Gene3D G3DSA:3.40.1030.10 69 334 4.6E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 330 8.5E-108 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 63 4.6E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 1.5E-91 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1032 f679ce419ebd4ae472f1e94183cecb34 335 SUPERFAMILY SSF52418 74 333 2.88E-83 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 SUPERFAMILY SSF51905 159 347 9.54E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 SUPERFAMILY SSF51905 3 209 4.12E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 185 2.8E-6 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 2.8E-6 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-6 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 334 2.9E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 Gene3D G3DSA:3.50.50.100 1 414 3.4E-113 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.9E-10 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 5.9E-10 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 5.9E-10 T 14-10-2018 llmg_1734 4715fb8bc68a8f07ec5f64f276f2f76d 667 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.9E-10 T 14-10-2018 llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 282 9.4E-85 T 14-10-2018 IPR003797 DegV llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 Gene3D G3DSA:3.40.50.10440 5 147 4.8E-46 T 14-10-2018 llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 SUPERFAMILY SSF82549 1 283 2.88E-77 T 14-10-2018 llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 284 4.1E-81 T 14-10-2018 IPR003797 DegV llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 Gene3D G3DSA:2.20.28.50 28 64 4.8E-46 T 14-10-2018 llmg_2062 0ca1ec7bd425238035857e373bfbf34b 289 Gene3D G3DSA:3.30.1180.10 158 288 2.2E-37 T 14-10-2018 llmg_2416 f69e7a2b6aaef21b49c4285a6d23553a 110 Pfam PF02699 Preprotein translocase subunit 5 81 1.0E-20 T 14-10-2018 IPR003849 Preprotein translocase YajC llmg_2416 f69e7a2b6aaef21b49c4285a6d23553a 110 SMART SM01323 1 84 2.7E-26 T 14-10-2018 IPR003849 Preprotein translocase YajC llmg_2416 f69e7a2b6aaef21b49c4285a6d23553a 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 83 3.4E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 1.6E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 SUPERFAMILY SSF53474 3 271 7.44E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 24 270 3.3E-72 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 15 271 30.594 T 14-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 Pfam PF12697 Alpha/beta hydrolase family 28 259 2.6E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_1830 ba539ca8de9c7415a469c3bfea096c2f 271 Gene3D G3DSA:3.40.50.1820 13 271 1.2E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.460 746 852 9.6E-27 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 890 925 0.0023 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 SUPERFAMILY SSF49899 61 257 1.66E-17 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.460 573 678 1.5E-25 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.460 399 503 4.3E-28 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.470 679 745 1.0E-22 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.470 331 398 9.0E-20 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.470 504 572 8.9E-23 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:3.10.20.320 258 330 2.4E-18 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Gene3D G3DSA:2.60.120.200 32 257 1.6E-60 T 14-10-2018 llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Pfam PF00746 LPXTG cell wall anchor motif 883 924 6.9E-7 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Pfam PF06458 MucBP domain 263 325 5.3E-15 T 14-10-2018 IPR009459 MucBP domain llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Pfam PF06458 MucBP domain 331 397 0.8 T 14-10-2018 IPR009459 MucBP domain llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Pfam PF06458 MucBP domain 681 743 0.035 T 14-10-2018 IPR009459 MucBP domain llmg_2465 dea29de19c53dc308ed39d8b3d503f1f 925 Pfam PF06458 MucBP domain 506 571 0.21 T 14-10-2018 IPR009459 MucBP domain llmg_2304 8d89424eb5dc4f7bfccedd74972419aa 221 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 8 90 1.7E-20 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal llmg_0732 1c8898fa3081c39571c14e72d5e2ea21 220 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 213 6.8E-76 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 llmg_0732 1c8898fa3081c39571c14e72d5e2ea21 220 SUPERFAMILY SSF52540 1 218 3.44E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0732 1c8898fa3081c39571c14e72d5e2ea21 220 Pfam PF02224 Cytidylate kinase 6 217 2.5E-72 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 llmg_0732 1c8898fa3081c39571c14e72d5e2ea21 220 Hamap MF_00238 Cytidylate kinase [cmk]. 4 220 32.411 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 llmg_0732 1c8898fa3081c39571c14e72d5e2ea21 220 Gene3D G3DSA:3.40.50.300 1 220 1.8E-79 T 14-10-2018 llmg_2508 0198652db444424d5513aa2ad4e98171 175 Pfam PF04093 rod shape-determining protein MreD 2 166 1.9E-42 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 llmg_2508 0198652db444424d5513aa2ad4e98171 175 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 11 161 7.1E-20 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 llmg_0752 17bb3d4ead8506f53a719e2df84ee118 901 Pfam PF01061 ABC-2 type transporter 724 848 6.1E-10 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_0752 17bb3d4ead8506f53a719e2df84ee118 901 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 677 879 2.7E-47 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal llmg_0752 17bb3d4ead8506f53a719e2df84ee118 901 Pfam PF12698 ABC-2 family transporter protein 26 183 7.3E-11 T 14-10-2018 llmg_0752 17bb3d4ead8506f53a719e2df84ee118 901 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 14 176 2.2E-45 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal llmg_2197 da8f891df3d5ea085630091099b12c52 151 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 7 151 6.0E-76 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 llmg_2197 da8f891df3d5ea085630091099b12c52 151 Gene3D G3DSA:2.40.128.20 1 151 6.4E-75 T 14-10-2018 IPR012674 Calycin llmg_2197 da8f891df3d5ea085630091099b12c52 151 SUPERFAMILY SSF50814 3 150 1.71E-71 T 14-10-2018 IPR012674 Calycin llmg_2197 da8f891df3d5ea085630091099b12c52 151 PIRSF PIRSF011561 1 151 7.8E-90 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 llmg_2197 da8f891df3d5ea085630091099b12c52 151 Pfam PF05870 Phenolic acid decarboxylase (PAD) 7 151 1.5E-75 T 14-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 llmg_1096 8b15e949a8e737a473fc896efd8c6878 387 Pfam PF11797 Protein of unknown function C-terminal (DUF3324) 160 321 4.2E-37 T 14-10-2018 IPR021759 Domain of unknown function DUF3324, C-terminal llmg_1096 8b15e949a8e737a473fc896efd8c6878 387 Pfam PF06030 Bacterial protein of unknown function (DUF916) 30 149 1.4E-37 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 Pfam PF01728 FtsJ-like methyltransferase 61 243 2.7E-18 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 SUPERFAMILY SSF53335 58 245 1.25E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 SUPERFAMILY SSF55174 3 70 3.53E-7 T 14-10-2018 llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 PIRSF PIRSF005578 1 266 2.5E-95 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 Gene3D G3DSA:3.10.290.10 1 63 1.2E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 Gene3D G3DSA:3.40.50.150 64 268 2.9E-82 T 14-10-2018 llmg_1687 2a58ab08dd0adf19aa04503ed89b51ab 268 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 4 238 4.0E-77 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 llmg_0766 3a28b017851b9983816887d88d8e12f3 755 Gene3D G3DSA:3.30.980.40 276 379 9.4E-35 T 14-10-2018 llmg_0766 3a28b017851b9983816887d88d8e12f3 755 SUPERFAMILY SSF46785 681 746 1.06E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0766 3a28b017851b9983816887d88d8e12f3 755 SMART SM00843 681 746 6.9E-27 T 14-10-2018 IPR018541 FtsK gamma domain llmg_0766 3a28b017851b9983816887d88d8e12f3 755 Pfam PF09397 Ftsk gamma domain 683 743 3.1E-23 T 14-10-2018 IPR018541 FtsK gamma domain llmg_0766 3a28b017851b9983816887d88d8e12f3 755 Gene3D G3DSA:1.10.10.10 685 747 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0766 3a28b017851b9983816887d88d8e12f3 755 Pfam PF01580 FtsK/SpoIIIE family 394 579 4.7E-57 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 llmg_0766 3a28b017851b9983816887d88d8e12f3 755 SMART SM00382 418 600 1.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0766 3a28b017851b9983816887d88d8e12f3 755 Gene3D G3DSA:3.40.50.300 382 664 3.7E-105 T 14-10-2018 llmg_0766 3a28b017851b9983816887d88d8e12f3 755 SUPERFAMILY SSF52540 357 651 1.15E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1107 835a7122b9a9180bd991cbae134ee685 237 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 230 9.8E-50 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 236 41.699 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 SMART SM00934 5 231 4.7E-90 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 232 7.4E-63 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 58 71 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 Gene3D G3DSA:3.20.20.70 2 237 1.3E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1107 835a7122b9a9180bd991cbae134ee685 237 SUPERFAMILY SSF51366 2 235 1.56E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_0202 fe681cda66596b91258a4e83cc904956 554 Pfam PF13684 Dihydroxyacetone kinase family 237 554 7.4E-120 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain llmg_0202 fe681cda66596b91258a4e83cc904956 554 Pfam PF02734 DAK2 domain 34 198 2.5E-41 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0202 fe681cda66596b91258a4e83cc904956 554 SUPERFAMILY SSF101473 4 200 3.14E-47 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0202 fe681cda66596b91258a4e83cc904956 554 SMART SM01121 237 554 4.8E-181 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain llmg_0202 fe681cda66596b91258a4e83cc904956 554 Gene3D G3DSA:1.25.40.340 1 196 4.8E-13 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0202 fe681cda66596b91258a4e83cc904956 554 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 9 554 2.2E-206 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV llmg_0202 fe681cda66596b91258a4e83cc904956 554 SMART SM01120 34 199 3.8E-70 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 ProSitePatterns PS00106 Galactokinase signature. 35 46 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Gene3D G3DSA:3.30.230.10 28 210 2.3E-143 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Pfam PF08544 GHMP kinases C terminal 294 375 2.1E-13 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 130 141 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 SUPERFAMILY SSF55060 214 394 2.26E-54 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00473 Galactokinase signature 100 111 3.6E-24 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00473 Galactokinase signature 121 139 3.6E-24 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00473 Galactokinase signature 278 292 3.6E-24 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00473 Galactokinase signature 35 53 3.6E-24 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Gene3D G3DSA:3.30.70.890 211 371 2.3E-143 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Pfam PF10509 Galactokinase galactose-binding signature 16 64 3.2E-19 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Pfam PF00288 GHMP kinases N terminal domain 124 190 2.2E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PIRSF PIRSF000530 2 398 1.5E-124 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 TIGRFAM TIGR00131 gal_kin: galactokinase 13 393 4.4E-111 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 SUPERFAMILY SSF54211 6 211 3.49E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 Hamap MF_00246 Galactokinase [galK]. 33 395 48.391 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00959 Mevalonate kinase family signature 33 57 5.2E-41 T 14-10-2018 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00959 Mevalonate kinase family signature 342 359 5.2E-41 T 14-10-2018 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00959 Mevalonate kinase family signature 171 190 5.2E-41 T 14-10-2018 llmg_2235 d61d5e98d35acdc7d4b70a8923858ebf 399 PRINTS PR00959 Mevalonate kinase family signature 128 150 5.2E-41 T 14-10-2018 llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 1 546 45.929 T 14-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 Pfam PF00270 DEAD/DEAH box helicase 25 191 6.3E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 SMART SM00490 253 334 1.1E-31 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 SMART SM00487 20 217 2.5E-62 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 SUPERFAMILY SSF52540 70 355 7.25E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 Pfam PF00271 Helicase conserved C-terminal domain 225 334 2.6E-29 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 Gene3D G3DSA:3.40.50.300 1 206 2.9E-75 T 14-10-2018 llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 Gene3D G3DSA:3.40.50.300 209 439 6.8E-51 T 14-10-2018 llmg_0369 acb3f6afe72915f00af3bd1486daf470 551 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site llmg_1547 c32ee6a033809207007cb8a361a1a521 365 SUPERFAMILY SSF75620 29 364 4.45E-126 T 14-10-2018 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 365 40.113 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Gene3D G3DSA:3.30.160.20 225 320 7.1E-89 T 14-10-2018 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Pfam PF00472 RF-1 domain 228 337 4.8E-36 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Gene3D G3DSA:1.20.58.410 9 122 3.8E-24 T 14-10-2018 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 364 2.2E-153 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 SMART SM00937 84 194 1.2E-50 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Gene3D G3DSA:3.30.70.1660 129 358 7.1E-89 T 14-10-2018 llmg_1547 c32ee6a033809207007cb8a361a1a521 365 Pfam PF03462 PCRF domain 29 219 2.6E-59 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 llmg_0168 490837078034476e00aa9d6b9703e6b0 261 SMART SM00892 60 257 4.0E-16 T 14-10-2018 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 llmg_0168 490837078034476e00aa9d6b9703e6b0 261 Pfam PF13930 DNA/RNA non-specific endonuclease 68 208 5.3E-24 T 14-10-2018 llmg_0168 490837078034476e00aa9d6b9703e6b0 261 Gene3D G3DSA:3.40.570.10 37 259 1.4E-81 T 14-10-2018 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.6E-19 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 PRINTS PR01011 Glutathione peroxidase family signature 121 130 1.6E-19 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.6E-19 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 SUPERFAMILY SSF52833 1 157 8.15E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 Gene3D G3DSA:3.40.30.10 1 157 5.1E-74 T 14-10-2018 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 Pfam PF00255 Glutathione peroxidase 3 110 4.1E-45 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 llmg_1088 1b11562c8721f22a02034bb4ccf5b97c 157 PIRSF PIRSF000303 1 157 9.3E-73 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 llmg_0930 e3c43679585ef6d045592882883f3081 386 PIRSF PIRSF000429 6 385 6.6E-117 T 14-10-2018 IPR002155 Thiolase GO:0016747 llmg_0930 e3c43679585ef6d045592882883f3081 386 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 13 381 7.0E-131 T 14-10-2018 IPR002155 Thiolase GO:0016747 llmg_0930 e3c43679585ef6d045592882883f3081 386 Pfam PF00108 Thiolase, N-terminal domain 11 253 1.8E-79 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 llmg_0930 e3c43679585ef6d045592882883f3081 386 SUPERFAMILY SSF53901 11 261 3.01E-71 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0930 e3c43679585ef6d045592882883f3081 386 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 llmg_0930 e3c43679585ef6d045592882883f3081 386 SUPERFAMILY SSF53901 263 381 2.08E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0930 e3c43679585ef6d045592882883f3081 386 Gene3D G3DSA:3.40.47.10 13 267 1.3E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0930 e3c43679585ef6d045592882883f3081 386 ProSitePatterns PS00099 Thiolases active site. 365 378 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 llmg_0930 e3c43679585ef6d045592882883f3081 386 Gene3D G3DSA:3.40.47.10 133 380 1.3E-136 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 llmg_0930 e3c43679585ef6d045592882883f3081 386 Pfam PF02803 Thiolase, C-terminal domain 263 382 1.6E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 llmg_1217 8a40c45c1ebc0ca00bb16ac7ddda185f 266 Gene3D G3DSA:3.40.1190.20 2 266 1.9E-87 T 14-10-2018 IPR029056 Ribokinase-like llmg_1217 8a40c45c1ebc0ca00bb16ac7ddda185f 266 Pfam PF08543 Phosphomethylpyrimidine kinase 14 259 2.7E-84 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 llmg_1217 8a40c45c1ebc0ca00bb16ac7ddda185f 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 261 1.2E-90 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1217 8a40c45c1ebc0ca00bb16ac7ddda185f 266 SUPERFAMILY SSF53613 5 263 7.33E-73 T 14-10-2018 IPR029056 Ribokinase-like llmg_1719 a8ed1f3c907c68494b71dc0adb1f8497 237 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 40 226 3.4E-28 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 llmg_1719 a8ed1f3c907c68494b71dc0adb1f8497 237 Pfam PF04973 Nicotinamide mononucleotide transporter 41 226 2.6E-29 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 llmg_1732 77acc2a0c61ec832a6fd1e69c660a4f4 287 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 287 5.5E-109 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 llmg_1732 77acc2a0c61ec832a6fd1e69c660a4f4 287 Pfam PF03313 Serine dehydratase alpha chain 17 273 3.0E-72 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit llmg_2300 0fd72639763979d9bd7f1f100ecbfc32 128 Pfam PF00581 Rhodanese-like domain 36 122 3.3E-12 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_2300 0fd72639763979d9bd7f1f100ecbfc32 128 Gene3D G3DSA:3.40.250.10 24 126 3.1E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_2300 0fd72639763979d9bd7f1f100ecbfc32 128 SMART SM00450 30 126 3.9E-13 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_2300 0fd72639763979d9bd7f1f100ecbfc32 128 SUPERFAMILY SSF52821 9 121 7.33E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 292 9.2E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 SUPERFAMILY SSF55424 322 436 4.81E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 Gene3D G3DSA:3.30.390.30 326 440 1.1E-27 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 Gene3D G3DSA:3.50.50.60 9 305 3.7E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 326 432 1.1E-21 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 Gene3D G3DSA:3.50.50.60 134 248 3.7E-80 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PIRSF PIRSF000350 1 439 2.3E-81 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 256 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 429 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 343 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 187 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 134 3.3E-48 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 SUPERFAMILY SSF51905 1 298 3.4E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.2E-23 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 1.2E-23 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-23 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 1.2E-23 T 14-10-2018 llmg_2331 bf8358309657a9bfb838ffd0e80c6fc4 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 140 1.2E-23 T 14-10-2018 llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 43.528 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 SUPERFAMILY SSF53633 4 237 1.09E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.0E-97 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 Gene3D G3DSA:3.40.1160.10 2 238 2.8E-78 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 Pfam PF00696 Amino acid kinase family 7 217 3.1E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_2285 5c6a254598ae34fd6d39eca0a3c4c2f4 238 PIRSF PIRSF005650 1 238 5.2E-93 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 llmg_1797 57e91e071f51282454682a27940b47e9 157 Pfam PF17384 RimP C-terminal SH3 domain 88 157 4.8E-22 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal llmg_1797 57e91e071f51282454682a27940b47e9 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 157 20.06 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 llmg_1797 57e91e071f51282454682a27940b47e9 157 Gene3D G3DSA:3.30.300.70 1 82 1.2E-21 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily llmg_1797 57e91e071f51282454682a27940b47e9 157 SUPERFAMILY SSF75420 2 85 2.35E-19 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily llmg_1797 57e91e071f51282454682a27940b47e9 157 SUPERFAMILY SSF74942 86 157 4.58E-19 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily llmg_1797 57e91e071f51282454682a27940b47e9 157 Gene3D G3DSA:2.30.30.180 89 155 1.8E-24 T 14-10-2018 llmg_1797 57e91e071f51282454682a27940b47e9 157 Pfam PF02576 RimP N-terminal domain 12 85 1.1E-19 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal llmg_1238 32139a91dcd17374c42479c60f951445 66 SUPERFAMILY SSF50249 1 64 1.31E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1238 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1238 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1238 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 24 33 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1238 32139a91dcd17374c42479c60f951445 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.6E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1238 32139a91dcd17374c42479c60f951445 66 Gene3D G3DSA:2.40.50.140 1 66 2.1E-30 T 14-10-2018 llmg_1238 32139a91dcd17374c42479c60f951445 66 PIRSF PIRSF002599 1 66 6.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_1238 32139a91dcd17374c42479c60f951445 66 SMART SM00357 3 66 1.0E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1238 32139a91dcd17374c42479c60f951445 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site llmg_1256 32139a91dcd17374c42479c60f951445 66 SUPERFAMILY SSF50249 1 64 1.31E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1256 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 39 57 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1256 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 4 19 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1256 32139a91dcd17374c42479c60f951445 66 PRINTS PR00050 Cold shock protein signature 24 33 2.1E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1256 32139a91dcd17374c42479c60f951445 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.6E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 llmg_1256 32139a91dcd17374c42479c60f951445 66 Gene3D G3DSA:2.40.50.140 1 66 2.1E-30 T 14-10-2018 llmg_1256 32139a91dcd17374c42479c60f951445 66 PIRSF PIRSF002599 1 66 6.0E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 llmg_1256 32139a91dcd17374c42479c60f951445 66 SMART SM00357 3 66 1.0E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 llmg_1256 32139a91dcd17374c42479c60f951445 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 138 155 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 6.6E-27 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 Gene3D G3DSA:3.40.50.1370 139 283 2.7E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 SUPERFAMILY SSF53671 10 305 9.61E-85 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 12 304 8.2E-86 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 152 1.5E-32 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 302 3.4E-20 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 10 306 37.254 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 Gene3D G3DSA:3.40.50.1370 15 300 2.7E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.6E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 8.6E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 139 150 8.6E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0893 94a273c64e56d1802252b6dde889df1a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 8.6E-19 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0943 15f2b7070d51927c0ad0b233cf07c7a7 474 Gene3D G3DSA:3.60.60.10 11 239 8.3E-11 T 14-10-2018 llmg_0943 15f2b7070d51927c0ad0b233cf07c7a7 474 Pfam PF03577 Peptidase family C69 10 408 9.9E-186 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 llmg_1890 96f67162a5500087bd473d1b695a4481 92 SUPERFAMILY SSF54001 3 74 1.08E-5 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_1890 96f67162a5500087bd473d1b695a4481 92 Gene3D G3DSA:3.90.1720.10 1 90 9.1E-17 T 14-10-2018 llmg_1890 96f67162a5500087bd473d1b695a4481 92 Pfam PF05257 CHAP domain 4 64 5.2E-6 T 14-10-2018 IPR007921 CHAP domain llmg_0789 7b2cb0aebb344d2f1cf16b8c089d7752 324 Gene3D G3DSA:3.40.50.2300 52 302 1.6E-82 T 14-10-2018 llmg_0789 7b2cb0aebb344d2f1cf16b8c089d7752 324 Gene3D G3DSA:3.40.50.2300 151 281 1.6E-82 T 14-10-2018 llmg_0789 7b2cb0aebb344d2f1cf16b8c089d7752 324 Pfam PF13407 Periplasmic binding protein domain 51 302 2.8E-61 T 14-10-2018 IPR025997 Periplasmic binding protein llmg_0789 7b2cb0aebb344d2f1cf16b8c089d7752 324 SUPERFAMILY SSF53822 49 322 1.14E-82 T 14-10-2018 IPR028082 Periplasmic binding protein-like I llmg_0354 94a1ed93869fbafa54d8c8adedc3d82c 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 128 7.1E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_0354 94a1ed93869fbafa54d8c8adedc3d82c 130 Gene3D G3DSA:3.10.180.10 11 130 7.1E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0354 94a1ed93869fbafa54d8c8adedc3d82c 130 SUPERFAMILY SSF54593 4 130 3.03E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 SUPERFAMILY SSF46689 3 59 2.05E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 Gene3D G3DSA:1.10.357.10 1 175 3.4E-45 T 14-10-2018 llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 ProSitePatterns PS01081 TetR-type HTH domain signature. 19 50 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site llmg_0157 6251ba9851a599e9e7f365efb3671e44 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 50 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 Pfam PF00303 Thymidylate synthase 8 279 3.0E-61 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 PRINTS PR00108 Thymidylate synthase family signature 121 140 4.4E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 PRINTS PR00108 Thymidylate synthase family signature 171 197 4.4E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 PRINTS PR00108 Thymidylate synthase family signature 54 75 4.4E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 PRINTS PR00108 Thymidylate synthase family signature 209 226 4.4E-13 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 Gene3D G3DSA:3.30.572.10 2 279 7.4E-67 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 33.677 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 SUPERFAMILY SSF55831 4 278 1.57E-69 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_0964 bb125ab191e4e259d3488a87fdaf54f4 279 ProSitePatterns PS00091 Thymidylate synthase active site. 132 161 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 llmg_1692 39f3fe1f63c2af77a5363b5b99d02da9 417 Pfam PF02601 Exonuclease VII, large subunit 122 414 1.2E-90 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 llmg_1692 39f3fe1f63c2af77a5363b5b99d02da9 417 Pfam PF13742 OB-fold nucleic acid binding domain 5 98 7.0E-26 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 llmg_1692 39f3fe1f63c2af77a5363b5b99d02da9 417 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 417 8.6E-141 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 llmg_1692 39f3fe1f63c2af77a5363b5b99d02da9 417 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 417 29.583 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 llmg_2230 ad44db470a68f8497fffebd962b06356 122 SUPERFAMILY SSF69118 2 119 1.54E-31 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 llmg_2230 ad44db470a68f8497fffebd962b06356 122 Gene3D G3DSA:1.20.1290.10 2 122 5.8E-37 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 llmg_2230 ad44db470a68f8497fffebd962b06356 122 Pfam PF02627 Carboxymuconolactone decarboxylase family 31 116 1.5E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 26 78 6.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 78 22.666 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 SUPERFAMILY SSF46911 6 79 1.7E-29 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 Pfam PF01084 Ribosomal protein S18 22 73 1.6E-27 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 Gene3D G3DSA:4.10.640.10 1 80 2.4E-31 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 3.5E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 3.5E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 3.5E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 3.5E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 6.1E-32 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2473 5b8a2c111c8258cc82c275f755a2c15d 81 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 SUPERFAMILY SSF53623 99 300 3.01E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Gene3D G3DSA:3.40.1390.10 1 79 2.5E-24 T 14-10-2018 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 SUPERFAMILY SSF63418 2 95 7.85E-17 T 14-10-2018 IPR035911 MurE/MurF, N-terminal llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Pfam PF08245 Mur ligase middle domain 104 282 1.3E-41 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Pfam PF01225 Mur ligase family, catalytic domain 27 82 9.4E-5 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 374 1.3E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Gene3D G3DSA:3.40.1190.10 80 301 2.3E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 3 440 31.429 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 SUPERFAMILY SSF53244 304 440 1.15E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 Gene3D G3DSA:3.90.190.20 302 440 7.3E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_0361 cc2ae7e2caffd72fae0ed77aa69e5a8d 440 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 440 6.0E-113 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 5.3E-31 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 SMART SM00883 1 93 3.2E-46 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 23.865 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 Gene3D G3DSA:2.30.33.40 1 94 4.1E-33 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 PRINTS PR00297 10kDa chaperonin signature 80 93 2.1E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 PRINTS PR00297 10kDa chaperonin signature 2 17 2.1E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 PRINTS PR00297 10kDa chaperonin signature 24 45 2.1E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 PRINTS PR00297 10kDa chaperonin signature 59 71 2.1E-26 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 llmg_0410 90e8d2bce389b500cb30e9ab58611170 94 SUPERFAMILY SSF50129 1 94 5.65E-29 T 14-10-2018 IPR011032 GroES-like superfamily llmg_1498 c7cf0e08762fff0fe349e0db1bb2d913 121 Gene3D G3DSA:2.60.300.12 1 120 5.4E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 llmg_1498 c7cf0e08762fff0fe349e0db1bb2d913 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 112 2.3E-17 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 llmg_1498 c7cf0e08762fff0fe349e0db1bb2d913 121 SUPERFAMILY SSF89360 1 114 8.63E-19 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 PIRSF PIRSF006276 1 143 2.6E-20 T 14-10-2018 IPR006015 Universal stress protein A llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 PRINTS PR01438 Universal stress protein signature 121 143 1.9E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 PRINTS PR01438 Universal stress protein signature 5 23 1.9E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 PRINTS PR01438 Universal stress protein signature 103 115 1.9E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 Gene3D G3DSA:3.40.50.620 2 143 4.3E-37 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 SUPERFAMILY SSF52402 5 143 4.27E-36 T 14-10-2018 llmg_2047 f790184631310e9fb926a4aeb5ab4f28 143 Pfam PF00582 Universal stress protein family 5 143 7.7E-35 T 14-10-2018 IPR006016 UspA llmg_0015 ba7e99d901d354dd87b594576cc5ac3f 89 PIRSF PIRSF038881 1 89 4.4E-44 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type llmg_0015 ba7e99d901d354dd87b594576cc5ac3f 89 SUPERFAMILY SSF55174 1 77 4.84E-21 T 14-10-2018 llmg_0015 ba7e99d901d354dd87b594576cc5ac3f 89 Gene3D G3DSA:3.10.290.10 1 89 6.5E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_0015 ba7e99d901d354dd87b594576cc5ac3f 89 SMART SM00363 1 66 1.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0015 ba7e99d901d354dd87b594576cc5ac3f 89 Pfam PF01479 S4 domain 1 47 7.3E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1440 97da9a84f7ef0c1ac0a3a1e8010a2b9a 314 Pfam PF01636 Phosphotransferase enzyme family 70 249 3.4E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase llmg_1440 97da9a84f7ef0c1ac0a3a1e8010a2b9a 314 Gene3D G3DSA:3.90.1200.10 82 280 3.6E-6 T 14-10-2018 llmg_1440 97da9a84f7ef0c1ac0a3a1e8010a2b9a 314 SUPERFAMILY SSF56112 60 249 1.36E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 Gene3D G3DSA:3.40.1780.10 14 341 3.4E-127 T 14-10-2018 llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 45.653 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 Gene3D G3DSA:2.40.10.240 64 162 3.4E-127 T 14-10-2018 llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 Pfam PF02547 Queuosine biosynthesis protein 4 341 3.8E-135 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 5.8E-137 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 llmg_0926 027b750ed448f8434700619ab9fb3fc3 346 SUPERFAMILY SSF111337 1 341 4.19E-135 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 llmg_0240 3c64423f5d96cce033cda35a3db11028 244 SUPERFAMILY SSF53335 3 244 2.64E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0240 3c64423f5d96cce033cda35a3db11028 244 Gene3D G3DSA:3.40.50.150 7 242 1.2E-75 T 14-10-2018 llmg_0240 3c64423f5d96cce033cda35a3db11028 244 Gene3D G3DSA:2.20.25.110 141 203 1.2E-75 T 14-10-2018 llmg_0240 3c64423f5d96cce033cda35a3db11028 244 Pfam PF13649 Methyltransferase domain 38 133 1.2E-18 T 14-10-2018 llmg_2311 15e1633d5faa6e1bea79e14c9809f584 526 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 481 3.4E-134 T 14-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 llmg_2311 15e1633d5faa6e1bea79e14c9809f584 526 PIRSF PIRSF006060 458 517 99.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_2311 15e1633d5faa6e1bea79e14c9809f584 526 PIRSF PIRSF006060 1 462 1.4E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_2311 15e1633d5faa6e1bea79e14c9809f584 526 Gene3D G3DSA:1.20.1740.10 3 469 3.2E-49 T 14-10-2018 llmg_2311 15e1633d5faa6e1bea79e14c9809f584 526 Pfam PF13520 Amino acid permease 9 424 3.1E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0114 c3f4c994137ac6ec07656836ff9aa9e5 311 Pfam PF00535 Glycosyl transferase family 2 6 167 7.8E-25 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0114 c3f4c994137ac6ec07656836ff9aa9e5 311 SUPERFAMILY SSF53448 4 250 1.78E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0114 c3f4c994137ac6ec07656836ff9aa9e5 311 Gene3D G3DSA:3.90.550.10 2 213 9.6E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2326 6932cd1f25531b2b6daa4f00c579b0da 260 Pfam PF02517 CAAX protease self-immunity 163 250 5.0E-13 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 Gene3D G3DSA:3.40.50.300 277 410 1.4E-21 T 14-10-2018 llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 Gene3D G3DSA:3.40.50.300 106 274 1.4E-18 T 14-10-2018 llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 SMART SM00490 313 396 2.2E-8 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 SUPERFAMILY SSF52540 121 408 1.13E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 Pfam PF00271 Helicase conserved C-terminal domain 290 394 3.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 Pfam PF04851 Type III restriction enzyme, res subunit 105 249 2.6E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 llmg_1483 c211e76684a15991728ed1bfb4293cd8 430 SMART SM00487 102 296 6.8E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_1517 fe057dab99304efe8ff49fce7b365ab6 218 SUPERFAMILY SSF48317 5 212 4.71E-45 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily llmg_1517 fe057dab99304efe8ff49fce7b365ab6 218 Pfam PF01569 PAP2 superfamily 90 205 2.7E-21 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase llmg_1517 fe057dab99304efe8ff49fce7b365ab6 218 Gene3D G3DSA:1.20.144.10 4 122 1.2E-11 T 14-10-2018 llmg_1517 fe057dab99304efe8ff49fce7b365ab6 218 Gene3D G3DSA:1.20.144.10 123 218 4.0E-22 T 14-10-2018 llmg_1517 fe057dab99304efe8ff49fce7b365ab6 218 SMART SM00014 87 204 8.2E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.6E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.6E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.6E-18 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 Pfam PF01197 Ribosomal protein L31 1 79 3.2E-28 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 29.833 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 SUPERFAMILY SSF143800 1 79 1.26E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 7.4E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 Gene3D G3DSA:2.30.170.50 1 81 5.5E-26 T 14-10-2018 llmg_0906 e397ac9a66365b5c55248377f6eb4600 81 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_1707 6a3eb7bd35465a0f0c4246e3c49e1fcc 128 Pfam PF08759 Glycosyltransferase GT-D fold 27 104 5.7E-30 T 14-10-2018 IPR014869 Glycosyltransferase GT-D fold llmg_0751 9a5f9b078782e1c57717737376b35b52 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 3.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 436 448 3.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 3.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 3.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 3.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 SUPERFAMILY SSF51445 2 472 3.32E-157 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0751 9a5f9b078782e1c57717737376b35b52 477 Gene3D G3DSA:3.20.20.80 1 474 2.0E-152 T 14-10-2018 llmg_0751 9a5f9b078782e1c57717737376b35b52 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site llmg_0751 9a5f9b078782e1c57717737376b35b52 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site llmg_0751 9a5f9b078782e1c57717737376b35b52 477 Pfam PF00232 Glycosyl hydrolase family 1 3 471 3.9E-129 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 SUPERFAMILY SSF51998 134 699 9.61E-194 T 14-10-2018 llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 Pfam PF03477 ATP cone domain 15 103 1.6E-20 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 Gene3D G3DSA:3.20.70.20 134 699 4.2E-224 T 14-10-2018 llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 ProSitePatterns PS00850 Glycine radical domain signature. 688 696 - T 14-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 128 717 1.3E-184 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 llmg_0281 e9fc84ff8e80b337394ab6398d7cda0b 747 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 129 717 1.9E-182 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 SMART SM00862 151 226 3.6E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 SUPERFAMILY SSF46894 131 227 2.24E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 SMART SM00448 4 114 1.6E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 Gene3D G3DSA:1.10.10.10 126 230 2.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0908 ac5d502e7e17f227047d9642702552dc 230 SUPERFAMILY SSF52172 2 128 2.42E-40 T 14-10-2018 IPR011006 CheY-like superfamily llmg_0908 ac5d502e7e17f227047d9642702552dc 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 1.1E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 llmg_0908 ac5d502e7e17f227047d9642702552dc 230 Gene3D G3DSA:3.40.50.2300 1 124 9.0E-39 T 14-10-2018 llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 SUPERFAMILY SSF109755 3 216 8.69E-58 T 14-10-2018 llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 PIRSF PIRSF003107 1 217 1.5E-60 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 Gene3D G3DSA:1.20.58.220 2 217 3.3E-62 T 14-10-2018 IPR038078 PhoU-like domain superfamily llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 Pfam PF01895 PhoU domain 123 206 1.9E-11 T 14-10-2018 IPR026022 PhoU domain llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 Pfam PF01895 PhoU domain 18 104 1.2E-22 T 14-10-2018 IPR026022 PhoU domain llmg_1895 6d3c1eb15576b0c5e438fe0f20b3e487 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 215 1.7E-65 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 llmg_1025 48085f936452d283f3333b391dbd4fa1 226 Pfam PF01988 VIT family 15 223 2.1E-43 T 14-10-2018 IPR008217 Ccc1 family llmg_1176 a0d166b54f0df7b83367f96f41d0b1fd 257 SUPERFAMILY SSF53098 61 255 9.86E-65 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1176 a0d166b54f0df7b83367f96f41d0b1fd 257 Hamap MF_00052_B Ribonuclease HII [rnhB]. 72 250 33.779 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 llmg_1176 a0d166b54f0df7b83367f96f41d0b1fd 257 Gene3D G3DSA:3.30.420.10 50 257 4.4E-76 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1176 a0d166b54f0df7b83367f96f41d0b1fd 257 Pfam PF01351 Ribonuclease HII 74 248 4.8E-36 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain llmg_2010 b6874e4f39a9d185aee8642806e76fa7 98 SUPERFAMILY SSF82771 4 74 4.45E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 llmg_2010 b6874e4f39a9d185aee8642806e76fa7 98 Gene3D G3DSA:3.40.1440.10 1 97 1.1E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 llmg_2010 b6874e4f39a9d185aee8642806e76fa7 98 Pfam PF01541 GIY-YIG catalytic domain 4 71 8.1E-14 T 14-10-2018 IPR000305 GIY-YIG endonuclease llmg_0096 71cf8dd522c5db9bef396be603f9338c 389 SUPERFAMILY SSF54593 14 290 6.61E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0096 71cf8dd522c5db9bef396be603f9338c 389 Gene3D G3DSA:3.10.180.10 19 295 3.1E-85 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0096 71cf8dd522c5db9bef396be603f9338c 389 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 19 140 3.5E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_0096 71cf8dd522c5db9bef396be603f9338c 389 Gene3D G3DSA:3.10.180.10 78 231 3.1E-85 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0844 56b2eb499b439391780086ba49045cc4 1566 SUPERFAMILY SSF58113 932 1099 3.79E-9 T 14-10-2018 llmg_0844 56b2eb499b439391780086ba49045cc4 1566 Gene3D G3DSA:1.20.120.20 997 1135 4.7E-11 T 14-10-2018 llmg_0844 56b2eb499b439391780086ba49045cc4 1566 SUPERFAMILY SSF53955 1324 1422 5.57E-5 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_0448 9a9816fc18331a723a0b24086b661944 292 SUPERFAMILY SSF143597 55 251 9.55E-65 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily llmg_0448 9a9816fc18331a723a0b24086b661944 292 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 29 262 6.0E-78 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 llmg_0448 9a9816fc18331a723a0b24086b661944 292 PIRSF PIRSF004793 17 278 3.4E-85 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 llmg_0448 9a9816fc18331a723a0b24086b661944 292 Gene3D G3DSA:3.40.1700.10 117 268 1.6E-56 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily llmg_0448 9a9816fc18331a723a0b24086b661944 292 Hamap MF_01499 Diadenylate cyclase [dacA]. 22 267 31.586 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 llmg_0448 9a9816fc18331a723a0b24086b661944 292 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 131 248 3.7E-42 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 SUPERFAMILY SSF46785 2 84 3.31E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 Gene3D G3DSA:3.40.190.10 174 276 2.0E-8 T 14-10-2018 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 Gene3D G3DSA:3.40.190.10 124 295 2.0E-8 T 14-10-2018 llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 Gene3D G3DSA:1.10.10.10 1 83 9.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0947 d7a3ed144e31f902e496ea48d327195c 317 SUPERFAMILY SSF53850 122 300 1.47E-15 T 14-10-2018 llmg_0136 bc156401f1b3da49a1e96b6f7bfc149d 173 SUPERFAMILY SSF55874 27 166 2.61E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_0136 bc156401f1b3da49a1e96b6f7bfc149d 173 Gene3D G3DSA:3.30.565.10 27 173 7.7E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1220 30b740227ed32e3898ce1d3f0ad51a5b 407 PIRSF PIRSF016636 2 398 8.0E-77 T 14-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB llmg_1220 30b740227ed32e3898ce1d3f0ad51a5b 407 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 2 389 3.6E-157 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB llmg_1220 30b740227ed32e3898ce1d3f0ad51a5b 407 PIRSF PIRSF500216 1 395 1.5E-148 T 14-10-2018 IPR024024 D-alanyl transfer protein DltB llmg_1220 30b740227ed32e3898ce1d3f0ad51a5b 407 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 44 383 3.9E-20 T 14-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 130 2.9E-31 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 302 9.7E-46 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 SUPERFAMILY SSF111331 1 303 3.92E-65 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 Gene3D G3DSA:2.60.200.40 131 294 2.0E-31 T 14-10-2018 llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 SMART SM00046 3 134 5.2E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_1919 0428289256dd1d1a8a145d0f76a6b8a5 304 Gene3D G3DSA:3.40.50.10330 1 130 3.1E-29 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 llmg_0182 b2f06e977533360fbdbca59e4e3818bd 230 Pfam PF01694 Rhomboid family 59 196 1.5E-34 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 llmg_0182 b2f06e977533360fbdbca59e4e3818bd 230 Gene3D G3DSA:1.20.1540.10 8 199 5.7E-34 T 14-10-2018 IPR035952 Rhomboid-like superfamily llmg_0182 b2f06e977533360fbdbca59e4e3818bd 230 SUPERFAMILY SSF144091 10 198 5.23E-36 T 14-10-2018 llmg_0961 5fcead498520952880c7fa140b55dc6f 300 Gene3D G3DSA:3.30.420.40 121 283 1.2E-77 T 14-10-2018 llmg_0961 5fcead498520952880c7fa140b55dc6f 300 Gene3D G3DSA:3.30.420.40 5 294 1.2E-77 T 14-10-2018 llmg_0961 5fcead498520952880c7fa140b55dc6f 300 SUPERFAMILY SSF53067 1 299 1.65E-59 T 14-10-2018 llmg_0961 5fcead498520952880c7fa140b55dc6f 300 Pfam PF00480 ROK family 5 299 4.0E-49 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1964 fdb85e29130b647a1259a2764b875d7d 189 Gene3D G3DSA:1.10.1760.20 1 188 1.2E-59 T 14-10-2018 llmg_1964 fdb85e29130b647a1259a2764b875d7d 189 Pfam PF02632 BioY family 33 179 1.1E-32 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 llmg_1964 fdb85e29130b647a1259a2764b875d7d 189 PIRSF PIRSF016661 1 185 6.5E-36 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Pfam PF08676 MutL C terminal dimerisation domain 455 598 5.4E-42 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Gene3D G3DSA:3.30.230.10 214 326 1.5E-30 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_2489 5877892f802de3796ba6dfd442610dda 656 SMART SM01340 209 327 8.3E-53 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 122 5.2E-9 T 14-10-2018 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Gene3D G3DSA:3.30.565.10 4 213 1.4E-62 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_2489 5877892f802de3796ba6dfd442610dda 656 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 307 2.1E-98 T 14-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 llmg_2489 5877892f802de3796ba6dfd442610dda 656 SUPERFAMILY SSF55874 7 214 3.54E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_2489 5877892f802de3796ba6dfd442610dda 656 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site llmg_2489 5877892f802de3796ba6dfd442610dda 656 SUPERFAMILY SSF54211 191 327 1.56E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_2489 5877892f802de3796ba6dfd442610dda 656 SMART SM00853 456 598 6.7E-47 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Gene3D G3DSA:2.30.42.20 457 640 8.5E-56 T 14-10-2018 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 638 27.982 T 14-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 llmg_2489 5877892f802de3796ba6dfd442610dda 656 SUPERFAMILY SSF118116 451 640 1.05E-51 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily llmg_2489 5877892f802de3796ba6dfd442610dda 656 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 326 2.7E-36 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 llmg_2489 5877892f802de3796ba6dfd442610dda 656 Gene3D G3DSA:3.30.1370.100 498 591 8.5E-56 T 14-10-2018 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 SMART SM00422 5 73 1.4E-22 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 SUPERFAMILY SSF46955 5 117 4.4E-30 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 Gene3D G3DSA:1.10.1660.10 1 118 1.3E-31 T 14-10-2018 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 Pfam PF13411 MerR HTH family regulatory protein 5 70 2.7E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 6 17 1.4E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 1.4E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2231 f97980a8f57d4e7d449053d9a90079fb 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.4E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 Gene3D G3DSA:3.10.310.10 5 252 1.9E-103 T 14-10-2018 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 Pfam PF02567 Phenazine biosynthesis-like protein 8 256 3.3E-59 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 SUPERFAMILY SSF54506 1 260 7.85E-84 T 14-10-2018 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 PIRSF PIRSF016184 1 260 1.8E-68 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 256 4.5E-38 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 llmg_1150 eda192b621d53eab235ee7a224aadc55 260 Gene3D G3DSA:3.10.310.10 117 248 1.9E-103 T 14-10-2018 llmg_1291 cdd0589f4732b03f664c29d32075714a 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 237 35.491 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 llmg_1291 cdd0589f4732b03f664c29d32075714a 246 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 233 1.8E-87 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 llmg_1291 cdd0589f4732b03f664c29d32075714a 246 Gene3D G3DSA:3.20.20.70 3 243 3.4E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1291 cdd0589f4732b03f664c29d32075714a 246 Pfam PF00977 Histidine biosynthesis protein 2 229 1.6E-77 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 llmg_1291 cdd0589f4732b03f664c29d32075714a 246 SUPERFAMILY SSF51366 1 233 8.07E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 428 2.1E-180 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 SMART SM00382 100 253 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Gene3D G3DSA:3.40.50.300 92 286 1.8E-122 T 14-10-2018 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 SMART SM00962 101 297 1.4E-112 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Gene3D G3DSA:1.10.260.30 328 453 8.4E-34 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 SUPERFAMILY SSF52540 43 355 9.96E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 SMART SM00963 2 87 1.8E-30 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 472 33.292 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 SUPERFAMILY SSF47446 328 429 8.99E-31 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.4E-22 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Pfam PF02978 Signal peptide binding domain 329 427 2.1E-27 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.4E-75 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 llmg_0878 a8ffa842e963b647cbe80ff958745bd8 518 Gene3D G3DSA:1.20.120.140 5 307 1.8E-122 T 14-10-2018 llmg_0377 665aded8c18647a9db686afe60370f40 126 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 12 103 4.9E-8 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA llmg_0377 665aded8c18647a9db686afe60370f40 126 Gene3D G3DSA:1.20.1500.10 7 111 9.9E-9 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily llmg_0377 665aded8c18647a9db686afe60370f40 126 SUPERFAMILY SSF158622 7 111 7.19E-15 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily llmg_0431 dd794e66f37bebc99a992e58c0b4e0ee 219 Gene3D G3DSA:3.40.50.360 1 219 2.2E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0431 dd794e66f37bebc99a992e58c0b4e0ee 219 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 215 21.802 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 llmg_0431 dd794e66f37bebc99a992e58c0b4e0ee 219 SUPERFAMILY SSF52218 2 218 3.03E-32 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0431 dd794e66f37bebc99a992e58c0b4e0ee 219 Pfam PF02525 Flavodoxin-like fold 2 214 2.7E-35 T 14-10-2018 IPR003680 Flavodoxin-like fold llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 Gene3D G3DSA:3.40.50.12740 4 209 9.8E-71 T 14-10-2018 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 SMART SM00421 146 203 1.2E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 SMART SM00448 4 117 6.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 SUPERFAMILY SSF52172 3 132 2.99E-28 T 14-10-2018 IPR011006 CheY-like superfamily llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 2.8E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 SUPERFAMILY SSF46894 142 209 8.5E-24 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.2E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 llmg_1648 b0a4cd2af3633295a082d176c9a13dd4 209 Pfam PF00072 Response regulator receiver domain 7 117 7.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 llmg_1284 0a7289f04748449f7c824ac95430a220 458 Gene3D G3DSA:3.30.499.20 5 284 1.6E-95 T 14-10-2018 llmg_1284 0a7289f04748449f7c824ac95430a220 458 Gene3D G3DSA:3.30.499.10 315 458 1.1E-44 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 2 458 55.961 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 SUPERFAMILY SSF53732 2 457 5.76E-155 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 Pfam PF00330 Aconitase family (aconitate hydratase) 8 449 2.5E-142 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 ProSitePatterns PS01244 Aconitase family signature 2. 391 404 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 ProSitePatterns PS00450 Aconitase family signature 1. 331 347 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 195 208 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 284 298 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 108 116 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 119 132 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 335 346 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 82 95 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 133 148 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 209 222 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 PRINTS PR00415 Aconitase family signature 391 404 3.8E-43 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 llmg_1284 0a7289f04748449f7c824ac95430a220 458 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 4 457 3.3E-200 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 llmg_2403 94a78197eb08a954079ebce124da1d61 148 PIRSF PIRSF031611 1 148 3.4E-58 T 14-10-2018 IPR016977 Competence operon G, ComGF llmg_2403 94a78197eb08a954079ebce124da1d61 148 Pfam PF15980 Putative Competence protein ComGF 46 137 3.1E-18 T 14-10-2018 IPR016977 Competence operon G, ComGF llmg_1293 06d30b387f1f912491d57a3234879320 262 Pfam PF01636 Phosphotransferase enzyme family 44 243 1.6E-19 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase llmg_1293 06d30b387f1f912491d57a3234879320 262 SUPERFAMILY SSF56112 35 255 4.37E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily llmg_1293 06d30b387f1f912491d57a3234879320 262 Gene3D G3DSA:3.90.1200.10 93 261 1.9E-40 T 14-10-2018 llmg_1293 06d30b387f1f912491d57a3234879320 262 PIRSF PIRSF000706 5 262 6.0E-68 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 llmg_1345 77fd7261ca2661324b910b9f8397dfd6 434 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 419 7.5E-120 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 llmg_1345 77fd7261ca2661324b910b9f8397dfd6 434 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 337 357 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 llmg_1345 77fd7261ca2661324b910b9f8397dfd6 434 Pfam PF00860 Permease family 15 385 1.3E-103 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 llmg_1345 77fd7261ca2661324b910b9f8397dfd6 434 TIGRFAM TIGR03173 pbuX: xanthine permease 19 421 1.1E-153 T 14-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 llmg_0007 f4b133997200760edede7a582c2fb15c 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 7.5E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0007 f4b133997200760edede7a582c2fb15c 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 7.5E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0007 f4b133997200760edede7a582c2fb15c 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 7.5E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0007 f4b133997200760edede7a582c2fb15c 371 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 7.5E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0007 f4b133997200760edede7a582c2fb15c 371 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 371 43.182 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 llmg_0007 f4b133997200760edede7a582c2fb15c 371 Gene3D G3DSA:1.10.150.300 113 205 4.3E-146 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 llmg_0007 f4b133997200760edede7a582c2fb15c 371 Gene3D G3DSA:3.40.50.300 4 286 4.3E-146 T 14-10-2018 llmg_0007 f4b133997200760edede7a582c2fb15c 371 SUPERFAMILY SSF52540 3 309 3.28E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0007 f4b133997200760edede7a582c2fb15c 371 SUPERFAMILY SSF81271 287 371 4.58E-34 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 llmg_0007 f4b133997200760edede7a582c2fb15c 371 PIRSF PIRSF006641 1 371 5.9E-151 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 llmg_0007 f4b133997200760edede7a582c2fb15c 371 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 371 6.7E-146 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 llmg_0007 f4b133997200760edede7a582c2fb15c 371 Pfam PF06071 Protein of unknown function (DUF933) 287 370 2.2E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 llmg_0007 f4b133997200760edede7a582c2fb15c 371 Gene3D G3DSA:3.10.20.30 48 369 4.3E-146 T 14-10-2018 IPR012675 Beta-grasp domain superfamily llmg_0007 f4b133997200760edede7a582c2fb15c 371 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_2391 07fb3b724d6a4a6104e160789b8c6553 605 Pfam PF01757 Acyltransferase family 7 337 3.1E-23 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 llmg_2391 07fb3b724d6a4a6104e160789b8c6553 605 SUPERFAMILY SSF52266 445 602 9.49E-13 T 14-10-2018 llmg_2391 07fb3b724d6a4a6104e160789b8c6553 605 Gene3D G3DSA:3.40.50.1110 430 602 2.3E-8 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 Gene3D G3DSA:3.40.50.1100 10 300 6.8E-116 T 14-10-2018 llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 291 2.6E-67 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 304 3.1E-118 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 SUPERFAMILY SSF53686 3 304 7.86E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 304 4.6E-122 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 llmg_1775 5a62f701e479d32a0c60a43280fcaa88 306 Gene3D G3DSA:3.40.50.1100 45 145 6.8E-116 T 14-10-2018 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 Pfam PF01546 Peptidase family M20/M25/M40 142 406 5.9E-10 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 SUPERFAMILY SSF53187 4 406 5.14E-72 T 14-10-2018 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 PIRSF PIRSF037215 1 412 1.1E-187 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 181 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 Gene3D G3DSA:3.30.70.360 213 323 6.6E-165 T 14-10-2018 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 SUPERFAMILY SSF55031 213 324 4.19E-39 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 Hamap MF_00550 Peptidase T [pepT]. 3 408 57.121 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 Gene3D G3DSA:3.40.630.10 6 404 6.6E-165 T 14-10-2018 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 412 7.3E-239 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 llmg_1994 f7cd7bfc4f44224295b5e4eef133ba2c 413 Pfam PF07687 Peptidase dimerisation domain 211 307 3.5E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 Pfam PF00005 ABC transporter 22 170 3.6E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 SUPERFAMILY SSF52540 7 240 2.41E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 SMART SM00382 31 217 4.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 PIRSF PIRSF039085 3 246 3.4E-115 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 Gene3D G3DSA:3.40.50.300 2 246 8.3E-83 T 14-10-2018 llmg_1943 dbeb6ff70777c9986e161b9e98212528 247 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0398 b1c05e8b9ebce3626c61aa4b02cad93d 144 Gene3D G3DSA:3.30.300.20 6 141 7.0E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_0398 b1c05e8b9ebce3626c61aa4b02cad93d 144 SUPERFAMILY SSF82784 2 141 2.22E-32 T 14-10-2018 IPR036102 OsmC/Ohr superfamily llmg_0398 b1c05e8b9ebce3626c61aa4b02cad93d 144 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 137 3.3E-61 T 14-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes llmg_0398 b1c05e8b9ebce3626c61aa4b02cad93d 144 Pfam PF02566 OsmC-like protein 39 138 1.8E-20 T 14-10-2018 IPR003718 OsmC/Ohr family llmg_2370 ebe726edc8b4f7383a68bf105a311447 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.741 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z llmg_2370 ebe726edc8b4f7383a68bf105a311447 61 Gene3D G3DSA:4.10.830.10 1 61 3.9E-30 T 14-10-2018 llmg_2370 ebe726edc8b4f7383a68bf105a311447 61 SUPERFAMILY SSF57716 3 61 2.0E-21 T 14-10-2018 llmg_2370 ebe726edc8b4f7383a68bf105a311447 61 Pfam PF00253 Ribosomal protein S14p/S29e 11 60 4.2E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2370 ebe726edc8b4f7383a68bf105a311447 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 114 2.9E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 SUPERFAMILY SSF51735 2 136 2.34E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 167 198 4.3E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 SUPERFAMILY SSF55347 164 287 1.39E-14 T 14-10-2018 llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 Gene3D G3DSA:3.30.360.10 133 325 6.5E-46 T 14-10-2018 llmg_0761 154dc2ad7e59d817eeb0f502043ff734 326 Gene3D G3DSA:3.40.50.720 1 132 1.4E-25 T 14-10-2018 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 78 9.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 43 58 9.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 PRINTS PR00598 Bacterial regulatory protein MarR family signature 26 42 9.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 SMART SM00347 5 102 2.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 Pfam PF01047 MarR family 26 66 8.9E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 SUPERFAMILY SSF46785 11 114 4.18E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1209 6956775a1bbe439b541460a2092e4c8f 127 Gene3D G3DSA:1.10.10.10 4 127 5.4E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 Gene3D G3DSA:2.30.30.90 8 81 8.1E-8 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 Pfam PF04023 FeoA domain 9 75 6.7E-7 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 Pfam PF04023 FeoA domain 86 154 3.7E-16 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 SUPERFAMILY SSF50037 10 76 2.52E-7 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 Gene3D G3DSA:2.30.30.90 82 158 1.5E-23 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 SMART SM00899 8 76 1.5E-6 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 SMART SM00899 84 156 7.1E-20 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 llmg_0200 3f93e6c8dff4b3fe55667ff3dd7c8fe3 158 SUPERFAMILY SSF50037 89 155 5.95E-18 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 SUPERFAMILY SSF52518 2 204 8.24E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 Gene3D G3DSA:3.40.50.970 1 192 3.3E-73 T 14-10-2018 llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 Pfam PF02779 Transketolase, pyrimidine binding domain 5 178 2.6E-37 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 Pfam PF02780 Transketolase, C-terminal domain 195 314 2.2E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 SMART SM00861 4 179 6.4E-55 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 Gene3D G3DSA:3.40.50.920 193 325 4.9E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0073 f6079003d773d23507e4dab5a1e32d10 326 SUPERFAMILY SSF52922 189 324 1.13E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 PRINTS PR00131 Glycosyl hydrolase family 1 signature 126 138 2.7E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 PRINTS PR00131 Glycosyl hydrolase family 1 signature 81 92 2.7E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 PRINTS PR00131 Glycosyl hydrolase family 1 signature 39 53 2.7E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 PRINTS PR00131 Glycosyl hydrolase family 1 signature 60 68 2.7E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 PRINTS PR00131 Glycosyl hydrolase family 1 signature 102 119 2.7E-14 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 Pfam PF00232 Glycosyl hydrolase family 1 6 155 8.2E-41 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 Gene3D G3DSA:3.20.20.80 1 158 1.7E-44 T 14-10-2018 llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 60 68 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site llmg_0960 5a8e02f05315f11ce5aa16dc383945d2 160 SUPERFAMILY SSF51445 2 157 8.4E-48 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0674 3191e41bedadffeeb174c8600e555b32 226 Pfam PF13610 DDE domain 72 202 1.1E-39 T 14-10-2018 IPR032874 DDE domain llmg_0674 3191e41bedadffeeb174c8600e555b32 226 SUPERFAMILY SSF53098 69 184 2.12E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0674 3191e41bedadffeeb174c8600e555b32 226 Gene3D G3DSA:3.30.420.10 63 194 2.5E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 Gene3D G3DSA:3.40.50.300 327 589 1.3E-79 T 14-10-2018 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 Pfam PF00664 ABC transporter transmembrane region 20 291 6.4E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 SMART SM00382 363 543 3.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 SUPERFAMILY SSF52540 329 574 2.24E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 Pfam PF00005 ABC transporter 354 502 6.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 Gene3D G3DSA:1.20.1560.10 1 322 3.1E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_1202 92c2ceff95396264bf54adca3cbfb5ee 605 SUPERFAMILY SSF90123 5 320 1.22E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 llmg_0017 7f7d0c395981a1695a3effd85a41904a 107 SUPERFAMILY SSF50249 2 81 3.51E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0017 7f7d0c395981a1695a3effd85a41904a 107 Gene3D G3DSA:2.40.50.140 1 85 1.2E-7 T 14-10-2018 llmg_1669 9df024d6f973806abdb1adc357fcb822 153 SUPERFAMILY SSF55729 50 149 3.26E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1669 9df024d6f973806abdb1adc357fcb822 153 Pfam PF00583 Acetyltransferase (GNAT) family 52 142 4.0E-13 T 14-10-2018 IPR000182 GNAT domain llmg_1669 9df024d6f973806abdb1adc357fcb822 153 Gene3D G3DSA:3.40.630.30 1 153 2.3E-36 T 14-10-2018 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 493 262.868 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 7 491 1.2E-266 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 20 228 1.2E-31 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 256 273 - T 14-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 244 438 3.5E-34 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 llmg_2234 bd4a28b74de4ae037dea7584b2e23811 493 PIRSF PIRSF006005 1 493 2.4E-227 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 llmg_1763 6dfd55a1a5e57d8df238ec8ebde9e937 79 Pfam PF11195 Protein of unknown function (DUF2829) 2 78 1.2E-21 T 14-10-2018 IPR021361 Protein of unknown function DUF2829 llmg_1509 13a9b1e18496ca3b46fa7338618206da 209 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 178 1.6E-45 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1509 13a9b1e18496ca3b46fa7338618206da 209 Gene3D G3DSA:3.40.50.2020 1 209 2.2E-61 T 14-10-2018 llmg_1509 13a9b1e18496ca3b46fa7338618206da 209 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 209 29.844 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 llmg_1509 13a9b1e18496ca3b46fa7338618206da 209 SUPERFAMILY SSF53271 11 208 1.97E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_1509 13a9b1e18496ca3b46fa7338618206da 209 Pfam PF00156 Phosphoribosyl transferase domain 46 159 4.2E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Gene3D G3DSA:1.10.40.30 362 434 3.2E-188 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 1.2E-29 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 1.2E-29 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 1.2E-29 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 1.2E-29 T 14-10-2018 IPR000362 Fumarate lyase family llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 42.693 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 1.6E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Pfam PF00206 Lyase 8 302 1.4E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Gene3D G3DSA:1.20.200.10 121 450 3.2E-188 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 1.9E-67 T 14-10-2018 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 Gene3D G3DSA:1.10.275.10 27 231 3.2E-188 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 SUPERFAMILY SSF48557 8 458 2.98E-149 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 457 1.1E-193 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 llmg_0139 5442667f337e5a4a8589518f3808a0dc 459 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 llmg_1878 2f40da94a7e181baa87de4c2a9358076 325 Pfam PF01029 NusB family 199 322 3.6E-31 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 llmg_1878 2f40da94a7e181baa87de4c2a9358076 325 Gene3D G3DSA:1.10.940.10 190 325 1.6E-30 T 14-10-2018 IPR035926 NusB-like superfamily llmg_1878 2f40da94a7e181baa87de4c2a9358076 325 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 186 325 17.887 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 llmg_1878 2f40da94a7e181baa87de4c2a9358076 325 SUPERFAMILY SSF48013 231 324 5.23E-29 T 14-10-2018 IPR035926 NusB-like superfamily llmg_1878 2f40da94a7e181baa87de4c2a9358076 325 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 216 324 1.4E-33 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 llmg_0089 31ee15a2dce9c715cc4899c62e71c23f 193 SUPERFAMILY SSF46689 2 83 5.49E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0089 31ee15a2dce9c715cc4899c62e71c23f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 57 5.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0089 31ee15a2dce9c715cc4899c62e71c23f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 9.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0089 31ee15a2dce9c715cc4899c62e71c23f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 9.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0089 31ee15a2dce9c715cc4899c62e71c23f 193 Gene3D G3DSA:1.10.357.10 1 192 1.2E-36 T 14-10-2018 llmg_0380 2bb5deee2293951cf47d298863821933 197 SUPERFAMILY SSF55154 4 189 2.49E-27 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 llmg_0380 2bb5deee2293951cf47d298863821933 197 Gene3D G3DSA:2.40.320.10 1 192 1.6E-45 T 14-10-2018 llmg_0380 2bb5deee2293951cf47d298863821933 197 SMART SM01118 4 195 8.4E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 llmg_0380 2bb5deee2293951cf47d298863821933 197 Pfam PF01928 CYTH domain 5 188 6.8E-34 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 llmg_0380 2bb5deee2293951cf47d298863821933 197 PIRSF PIRSF012526 1 196 6.3E-75 T 14-10-2018 IPR009195 Uncharacterised protein family YjbK llmg_0104 60532ab89682359144ea12158f58dc1e 180 PIRSF PIRSF037663 19 166 3.3E-11 T 14-10-2018 IPR017255 Acetyltransferase, GNAT, predicted llmg_0104 60532ab89682359144ea12158f58dc1e 180 SUPERFAMILY SSF55729 19 172 7.89E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0104 60532ab89682359144ea12158f58dc1e 180 Pfam PF00583 Acetyltransferase (GNAT) family 51 149 6.5E-14 T 14-10-2018 IPR000182 GNAT domain llmg_0104 60532ab89682359144ea12158f58dc1e 180 Gene3D G3DSA:3.40.630.30 18 179 1.5E-35 T 14-10-2018 llmg_0372 62375778c9300e84aa39fa23c5241400 530 SUPERFAMILY SSF56235 1 181 4.12E-40 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_0372 62375778c9300e84aa39fa23c5241400 530 Pfam PF13537 Glutamine amidotransferase domain 47 164 7.2E-33 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain llmg_0372 62375778c9300e84aa39fa23c5241400 530 SUPERFAMILY SSF52402 201 465 8.38E-64 T 14-10-2018 llmg_0372 62375778c9300e84aa39fa23c5241400 530 Gene3D G3DSA:3.40.50.620 198 497 2.9E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0372 62375778c9300e84aa39fa23c5241400 530 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 356 4.4E-111 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 llmg_0372 62375778c9300e84aa39fa23c5241400 530 Pfam PF00733 Asparagine synthase 351 500 4.6E-35 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 llmg_0372 62375778c9300e84aa39fa23c5241400 530 Pfam PF00733 Asparagine synthase 209 350 5.5E-48 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 llmg_0372 62375778c9300e84aa39fa23c5241400 530 Gene3D G3DSA:3.60.20.10 3 189 6.0E-49 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_0372 62375778c9300e84aa39fa23c5241400 530 PIRSF PIRSF001589 343 498 1.0E-21 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 llmg_0372 62375778c9300e84aa39fa23c5241400 530 PIRSF PIRSF001589 1 348 2.1E-79 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 llmg_1047 6309315aef2ade81aecb903d27102708 206 SUPERFAMILY SSF46785 4 75 5.03E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1047 6309315aef2ade81aecb903d27102708 206 Pfam PF02080 TrkA-C domain 135 195 3.1E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 llmg_1047 6309315aef2ade81aecb903d27102708 206 Gene3D G3DSA:1.10.10.10 5 129 8.9E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1047 6309315aef2ade81aecb903d27102708 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 7.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1047 6309315aef2ade81aecb903d27102708 206 Gene3D G3DSA:3.30.70.1450 134 203 1.0E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 llmg_1047 6309315aef2ade81aecb903d27102708 206 SUPERFAMILY SSF116726 131 203 8.76E-15 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 llmg_1047 6309315aef2ade81aecb903d27102708 206 SMART SM00345 12 71 1.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 PIRSF PIRSF001491 4 411 3.0E-154 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 Pfam PF01676 Metalloenzyme superfamily 7 399 1.1E-50 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 SUPERFAMILY SSF53649 4 410 2.75E-74 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 Gene3D G3DSA:3.40.720.10 7 407 7.7E-158 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 SUPERFAMILY SSF143856 115 234 2.22E-43 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 Gene3D G3DSA:3.30.70.1250 116 237 7.7E-158 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 Hamap MF_00740 Phosphopentomutase [deoB]. 5 407 52.649 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 llmg_1601 f87d0d16f395bd3f651b147dd19e68c4 411 TIGRFAM TIGR01696 deoB: phosphopentomutase 7 404 4.3E-150 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 llmg_1608 a042711af9362501b165a48eed021a53 333 Gene3D G3DSA:2.115.10.20 36 333 1.2E-58 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily llmg_1608 a042711af9362501b165a48eed021a53 333 Pfam PF04616 Glycosyl hydrolases family 43 44 304 1.9E-41 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 llmg_1608 a042711af9362501b165a48eed021a53 333 SUPERFAMILY SSF75005 25 329 3.14E-52 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily llmg_1281 f44195876afcd8f605f1ffe6a266aa58 278 Gene3D G3DSA:3.40.50.300 7 276 1.5E-59 T 14-10-2018 llmg_1281 f44195876afcd8f605f1ffe6a266aa58 278 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1281 f44195876afcd8f605f1ffe6a266aa58 278 SUPERFAMILY SSF52540 20 251 5.33E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1281 f44195876afcd8f605f1ffe6a266aa58 278 SMART SM00382 46 246 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1281 f44195876afcd8f605f1ffe6a266aa58 278 Pfam PF00005 ABC transporter 37 188 2.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0308 4d493002b7f71c4527f0144fb518c38b 156 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 28 151 2.9E-35 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 llmg_0308 4d493002b7f71c4527f0144fb518c38b 156 Gene3D G3DSA:3.40.630.30 26 155 1.3E-28 T 14-10-2018 llmg_0308 4d493002b7f71c4527f0144fb518c38b 156 Pfam PF00583 Acetyltransferase (GNAT) family 49 131 6.0E-15 T 14-10-2018 IPR000182 GNAT domain llmg_0308 4d493002b7f71c4527f0144fb518c38b 156 SUPERFAMILY SSF55729 31 154 1.6E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0037 00a91de7c4139ce97658a4c0338e042d 64 Pfam PF07868 Protein of unknown function (DUF1655) 10 64 1.3E-41 T 14-10-2018 IPR012450 Bacteriophage bIL310, Orf15 llmg_0490 5f0e0e17d70b6ad40226b08eff363fb0 283 Gene3D G3DSA:1.10.3720.10 2 275 4.3E-69 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0490 5f0e0e17d70b6ad40226b08eff363fb0 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 278 3.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0490 5f0e0e17d70b6ad40226b08eff363fb0 283 SUPERFAMILY SSF161098 8 283 8.37E-70 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 Gene3D G3DSA:1.10.10.10 1 103 6.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 Gene3D G3DSA:3.40.50.10490 104 279 1.8E-36 T 14-10-2018 llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 SUPERFAMILY SSF46689 1 73 9.14E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 Pfam PF01380 SIS domain 127 256 5.6E-26 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 4.1E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_1425 f384007bd65a6cc20d0a26a50d80c82c 283 SUPERFAMILY SSF53697 107 279 2.23E-40 T 14-10-2018 llmg_0061 f14779376e1d688ef5199d20e986edba 182 Pfam PF13673 Acetyltransferase (GNAT) domain 62 175 3.1E-18 T 14-10-2018 IPR000182 GNAT domain llmg_0061 f14779376e1d688ef5199d20e986edba 182 SUPERFAMILY SSF55729 35 179 6.42E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0061 f14779376e1d688ef5199d20e986edba 182 Gene3D G3DSA:3.40.630.30 32 181 2.5E-27 T 14-10-2018 llmg_1993 1e5ce65acb9f5051dc00db122ce2879f 507 Gene3D G3DSA:1.20.1740.10 3 499 2.6E-25 T 14-10-2018 llmg_1993 1e5ce65acb9f5051dc00db122ce2879f 507 PIRSF PIRSF006060 1 507 6.0E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1993 1e5ce65acb9f5051dc00db122ce2879f 507 Pfam PF13520 Amino acid permease 9 457 5.9E-32 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1540 349ce242a14e57c0e764b6f11d88f274 213 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 6 202 18.554 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 llmg_1540 349ce242a14e57c0e764b6f11d88f274 213 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 193 5.5E-46 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 llmg_1540 349ce242a14e57c0e764b6f11d88f274 213 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 199 2.0E-47 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 llmg_1540 349ce242a14e57c0e764b6f11d88f274 213 SMART SM01207 9 194 4.8E-70 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 llmg_1066 1e0d59116c32632d4373ae37d92f387e 146 Pfam PF14340 Domain of unknown function (DUF4395) 9 133 5.7E-24 T 14-10-2018 IPR025508 Domain of unknown function DUF4395 llmg_1066 1e0d59116c32632d4373ae37d92f387e 146 PIRSF PIRSF030042 7 142 3.2E-66 T 14-10-2018 IPR016942 Uncharacterised conserved protein UCP030042 llmg_1953 c732478a2d8c76e58934f6e72c3598fc 258 SUPERFAMILY SSF53474 3 247 2.25E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1953 c732478a2d8c76e58934f6e72c3598fc 258 Gene3D G3DSA:3.40.50.1820 1 258 3.9E-74 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1953 c732478a2d8c76e58934f6e72c3598fc 258 Pfam PF00756 Putative esterase 10 241 2.5E-20 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 llmg_1667 343212323624237117707634ad322c42 442 SUPERFAMILY SSF53448 59 333 5.06E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1667 343212323624237117707634ad322c42 442 Gene3D G3DSA:3.90.550.10 46 283 3.9E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1667 343212323624237117707634ad322c42 442 Pfam PF00535 Glycosyl transferase family 2 64 234 5.1E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1428 71834c879deca9ab11fb8d8d050578a3 353 SUPERFAMILY SSF51445 1 235 5.05E-77 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1428 71834c879deca9ab11fb8d8d050578a3 353 Pfam PF05913 Bacterial protein of unknown function (DUF871) 1 346 5.9E-120 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic llmg_1428 71834c879deca9ab11fb8d8d050578a3 353 SUPERFAMILY SSF50891 236 347 5.31E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_1428 71834c879deca9ab11fb8d8d050578a3 353 Gene3D G3DSA:3.20.20.70 1 237 2.9E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1428 71834c879deca9ab11fb8d8d050578a3 353 Gene3D G3DSA:2.40.100.10 238 353 6.8E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily llmg_1227 9c6a27069cd2c4fb7858a159d356c94e 340 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 16 338 1.3E-77 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 llmg_1227 9c6a27069cd2c4fb7858a159d356c94e 340 SUPERFAMILY SSF51569 3 339 9.94E-94 T 14-10-2018 llmg_1227 9c6a27069cd2c4fb7858a159d356c94e 340 Pfam PF00793 DAHP synthetase I family 34 333 4.7E-52 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 llmg_1227 9c6a27069cd2c4fb7858a159d356c94e 340 Gene3D G3DSA:3.20.20.70 10 340 7.7E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1227 9c6a27069cd2c4fb7858a159d356c94e 340 PIRSF PIRSF001361 1 340 2.3E-115 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 llmg_2374 943f10fa279838efb479ab9c971f995e 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 8.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 8.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 8.1E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 24.243 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 8.3E-35 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 Pfam PF00366 Ribosomal protein S17 11 78 9.1E-33 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 SUPERFAMILY SSF50249 6 83 3.64E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2374 943f10fa279838efb479ab9c971f995e 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 6.0E-36 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2374 943f10fa279838efb479ab9c971f995e 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2374 943f10fa279838efb479ab9c971f995e 86 Gene3D G3DSA:2.40.50.140 5 85 2.9E-35 T 14-10-2018 llmg_0080 63870a0c1729242570be15e043c428ec 145 Pfam PF02566 OsmC-like protein 47 140 2.0E-19 T 14-10-2018 IPR003718 OsmC/Ohr family llmg_0080 63870a0c1729242570be15e043c428ec 145 SUPERFAMILY SSF82784 3 143 4.58E-30 T 14-10-2018 IPR036102 OsmC/Ohr superfamily llmg_0080 63870a0c1729242570be15e043c428ec 145 Gene3D G3DSA:3.30.300.20 3 144 9.2E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_0080 63870a0c1729242570be15e043c428ec 145 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 142 2.2E-53 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Gene3D G3DSA:1.10.10.1230 110 214 1.6E-206 T 14-10-2018 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Pfam PF03717 Penicillin-binding Protein dimerisation domain 82 324 1.6E-37 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Gene3D G3DSA:3.40.710.10 339 689 1.6E-206 T 14-10-2018 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Gene3D G3DSA:2.20.70.40 308 330 1.6E-206 T 14-10-2018 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Pfam PF00905 Penicillin binding protein transpeptidase domain 372 704 8.1E-60 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 Gene3D G3DSA:3.90.1310.30 84 599 1.6E-206 T 14-10-2018 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 SUPERFAMILY SSF56519 82 339 1.11E-26 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 llmg_0358 114e529409b91a47c82d8b3404ed07be 721 SUPERFAMILY SSF56601 340 714 5.09E-56 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_1218 c4fa684498d2a37ba991f850de77d350 218 Gene3D G3DSA:3.20.20.70 1 217 2.1E-60 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1218 c4fa684498d2a37ba991f850de77d350 218 SUPERFAMILY SSF51391 6 214 9.29E-56 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1218 c4fa684498d2a37ba991f850de77d350 218 Pfam PF02581 Thiamine monophosphate synthase 10 195 9.4E-54 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1218 c4fa684498d2a37ba991f850de77d350 218 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 208 4.9E-63 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1218 c4fa684498d2a37ba991f850de77d350 218 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 215 25.992 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 Gene3D G3DSA:3.40.50.720 2 212 1.8E-25 T 14-10-2018 llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.5E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 SUPERFAMILY SSF51735 2 222 4.27E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2450 dbfa886d9e9ccc95534eb9d93802f3f2 246 Pfam PF00106 short chain dehydrogenase 3 125 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1306 8cf22be0beb256cebc92103ed5132381 815 SUPERFAMILY SSF49478 411 502 8.63E-23 T 14-10-2018 llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Pfam PF05738 Cna protein B-type domain 648 733 1.1E-16 T 14-10-2018 IPR008454 Collagen-binding surface protein Cna-like, B-type domain llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Pfam PF05738 Cna protein B-type domain 523 637 8.3E-7 T 14-10-2018 IPR008454 Collagen-binding surface protein Cna-like, B-type domain llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Pfam PF05738 Cna protein B-type domain 413 505 5.1E-18 T 14-10-2018 IPR008454 Collagen-binding surface protein Cna-like, B-type domain llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Gene3D G3DSA:2.60.40.1140 409 517 4.7E-19 T 14-10-2018 llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Gene3D G3DSA:2.60.40.1140 518 641 6.2E-8 T 14-10-2018 llmg_1306 8cf22be0beb256cebc92103ed5132381 815 Gene3D G3DSA:2.60.40.1140 642 737 4.2E-19 T 14-10-2018 llmg_1306 8cf22be0beb256cebc92103ed5132381 815 SUPERFAMILY SSF49478 642 733 1.77E-19 T 14-10-2018 llmg_1306 8cf22be0beb256cebc92103ed5132381 815 SUPERFAMILY SSF49899 88 209 4.93E-6 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily llmg_2390 092928eb0fff1a0f96d5d5121e22df28 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 49 14.352 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2390 092928eb0fff1a0f96d5d5121e22df28 49 Gene3D G3DSA:2.20.28.120 2 49 2.8E-15 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2390 092928eb0fff1a0f96d5d5121e22df28 49 Pfam PF00471 Ribosomal protein L33 6 49 1.0E-15 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2390 092928eb0fff1a0f96d5d5121e22df28 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 6 49 2.5E-11 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2390 092928eb0fff1a0f96d5d5121e22df28 49 SUPERFAMILY SSF57829 3 49 1.04E-13 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 Gene3D G3DSA:3.10.20.340 269 396 1.0E-39 T 14-10-2018 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 29 395 0.0 T 14-10-2018 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 Pfam PF01960 ArgJ family 17 396 2.9E-142 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 396 141.286 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 SUPERFAMILY SSF56266 11 392 9.55E-135 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 Gene3D G3DSA:3.60.70.12 1 183 1.0E-65 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 4 396 3.6E-143 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 llmg_1757 75abf3957fd05991bcc2a9eb7b84f0cf 396 Gene3D G3DSA:3.30.2330.10 184 268 4.1E-32 T 14-10-2018 llmg_0483 383105b9b36a579810885c94f2768164 1070 Pfam PF14579 Helix-hairpin-helix motif 758 842 6.3E-12 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_0483 383105b9b36a579810885c94f2768164 1070 Pfam PF02811 PHP domain 5 131 3.1E-13 T 14-10-2018 IPR004013 PHP domain GO:0003824 llmg_0483 383105b9b36a579810885c94f2768164 1070 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 287 684 4.3E-157 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_0483 383105b9b36a579810885c94f2768164 1070 Gene3D G3DSA:2.40.50.140 909 1004 6.1E-8 T 14-10-2018 llmg_0483 383105b9b36a579810885c94f2768164 1070 Gene3D G3DSA:3.20.20.140 1 227 6.5E-22 T 14-10-2018 llmg_0483 383105b9b36a579810885c94f2768164 1070 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 150 960 9.0E-217 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_0483 383105b9b36a579810885c94f2768164 1070 Gene3D G3DSA:1.10.10.1600 402 478 1.1E-9 T 14-10-2018 llmg_0483 383105b9b36a579810885c94f2768164 1070 SMART SM00481 3 70 1.2E-7 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal llmg_0483 383105b9b36a579810885c94f2768164 1070 Pfam PF01336 OB-fold nucleic acid binding domain 933 998 3.3E-8 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 llmg_0567 0381ccd66c4984c4759c8214328b18b7 220 Gene3D G3DSA:3.40.50.1000 1 212 4.3E-71 T 14-10-2018 IPR023214 HAD superfamily llmg_0567 0381ccd66c4984c4759c8214328b18b7 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 8 174 3.5E-22 T 14-10-2018 llmg_0567 0381ccd66c4984c4759c8214328b18b7 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 176 6.5E-33 T 14-10-2018 llmg_0567 0381ccd66c4984c4759c8214328b18b7 220 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 3 209 2.0E-74 T 14-10-2018 llmg_0567 0381ccd66c4984c4759c8214328b18b7 220 SUPERFAMILY SSF56784 6 212 1.87E-48 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 SUPERFAMILY SSF52788 2 144 4.19E-42 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 SMART SM00226 2 143 8.0E-33 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 141 1.0E-32 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 117 132 3.2E-13 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 3.2E-13 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 3.2E-13 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 llmg_2486 25dbe75edd880511c9fe82778cbf73f4 145 Gene3D G3DSA:3.40.50.2300 1 145 3.9E-49 T 14-10-2018 llmg_0095 d26d50158fb34fb666a3d0a37d9217a2 206 Gene3D G3DSA:3.40.50.1820 1 205 1.4E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0095 d26d50158fb34fb666a3d0a37d9217a2 206 SUPERFAMILY SSF53474 4 204 2.6E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0095 d26d50158fb34fb666a3d0a37d9217a2 206 Pfam PF01738 Dienelactone hydrolase family 80 182 1.2E-7 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 llmg_2460 0932df9b9351b190834b96a6bf037655 114 Pfam PF04237 YjbR 15 109 1.3E-14 T 14-10-2018 IPR007351 Uncharacterised protein YjbR llmg_2460 0932df9b9351b190834b96a6bf037655 114 Gene3D G3DSA:3.90.1150.30 1 114 2.9E-27 T 14-10-2018 IPR038056 YjbR-like superfamily llmg_2460 0932df9b9351b190834b96a6bf037655 114 SUPERFAMILY SSF142906 1 113 3.53E-29 T 14-10-2018 IPR038056 YjbR-like superfamily llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 222 33.515 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 Gene3D G3DSA:3.40.50.1360 5 213 1.0E-78 T 14-10-2018 llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 50 218 2.7E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 5 220 9.9E-82 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 SUPERFAMILY SSF75445 127 204 1.44E-19 T 14-10-2018 llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 SUPERFAMILY SSF100950 2 147 3.42E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_2511 3f9aa49a3a5f96c45cb2eadadd2a3334 224 Gene3D G3DSA:3.30.70.260 121 193 1.0E-78 T 14-10-2018 llmg_2452 0903a9fa8f797f1a0504c7b72f8a947e 281 SUPERFAMILY SSF51735 4 246 1.55E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2452 0903a9fa8f797f1a0504c7b72f8a947e 281 Pfam PF05368 NmrA-like family 4 213 6.3E-15 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 llmg_2452 0903a9fa8f797f1a0504c7b72f8a947e 281 Gene3D G3DSA:3.40.50.720 4 265 2.1E-71 T 14-10-2018 llmg_2452 0903a9fa8f797f1a0504c7b72f8a947e 281 Gene3D G3DSA:3.90.25.10 137 266 2.1E-71 T 14-10-2018 llmg_1804 720c76c5e522c1d75756595a4fbbc835 282 SUPERFAMILY SSF47413 3 63 1.66E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1804 720c76c5e522c1d75756595a4fbbc835 282 Pfam PF01381 Helix-turn-helix 13 60 4.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1804 720c76c5e522c1d75756595a4fbbc835 282 Gene3D G3DSA:1.10.260.40 6 115 7.9E-7 T 14-10-2018 llmg_1804 720c76c5e522c1d75756595a4fbbc835 282 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 66 272 1.2E-28 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_1804 720c76c5e522c1d75756595a4fbbc835 282 SMART SM00530 9 63 0.0011 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1759 505bf7cc5d96d8a528d2a8d95ad55cca 210 Gene3D G3DSA:3.40.50.720 3 209 1.2E-37 T 14-10-2018 llmg_1759 505bf7cc5d96d8a528d2a8d95ad55cca 210 Pfam PF13460 NAD(P)H-binding 9 196 2.5E-16 T 14-10-2018 IPR016040 NAD(P)-binding domain llmg_1759 505bf7cc5d96d8a528d2a8d95ad55cca 210 SUPERFAMILY SSF51735 1 208 3.88E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0494 a642ccfde0366054915e942bf2a0640a 406 SUPERFAMILY SSF51445 69 405 3.16E-60 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0494 a642ccfde0366054915e942bf2a0640a 406 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 317 334 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 llmg_0494 a642ccfde0366054915e942bf2a0640a 406 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 73 397 1.7E-49 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_0494 a642ccfde0366054915e942bf2a0640a 406 Gene3D G3DSA:3.20.20.300 69 401 2.1E-98 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 llmg_2562 577b56149b2ee0deb1ae14602cc32b01 211 Pfam PF06962 Putative rRNA methylase 43 208 4.0E-49 T 14-10-2018 IPR010719 Putative rRNA methylase llmg_2562 577b56149b2ee0deb1ae14602cc32b01 211 SUPERFAMILY SSF53335 16 202 2.15E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0778 355995da210a480abc4f8771c1899f4e 776 Gene3D G3DSA:3.40.50.300 289 593 1.5E-82 T 14-10-2018 llmg_0778 355995da210a480abc4f8771c1899f4e 776 PIRSF PIRSF005814 1 776 2.0E-238 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 llmg_0778 355995da210a480abc4f8771c1899f4e 776 SMART SM00463 698 776 1.0E-17 T 14-10-2018 IPR002625 Smr domain llmg_0778 355995da210a480abc4f8771c1899f4e 776 SMART SM00534 323 509 2.0E-72 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_0778 355995da210a480abc4f8771c1899f4e 776 SUPERFAMILY SSF48334 18 277 3.14E-26 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily llmg_0778 355995da210a480abc4f8771c1899f4e 776 Gene3D G3DSA:3.30.1370.110 689 776 4.9E-23 T 14-10-2018 llmg_0778 355995da210a480abc4f8771c1899f4e 776 Pfam PF00488 MutS domain V 326 508 8.3E-38 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_0778 355995da210a480abc4f8771c1899f4e 776 SMART SM00533 13 310 1.4E-13 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 llmg_0778 355995da210a480abc4f8771c1899f4e 776 SUPERFAMILY SSF52540 288 512 9.31E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0778 355995da210a480abc4f8771c1899f4e 776 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 776 1.8E-212 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 llmg_0778 355995da210a480abc4f8771c1899f4e 776 SUPERFAMILY SSF160443 699 775 5.89E-10 T 14-10-2018 IPR036063 Smr domain superfamily llmg_0778 355995da210a480abc4f8771c1899f4e 776 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 llmg_0778 355995da210a480abc4f8771c1899f4e 776 Pfam PF01713 Smr domain 701 776 5.4E-17 T 14-10-2018 IPR002625 Smr domain llmg_0778 355995da210a480abc4f8771c1899f4e 776 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 775 19.705 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 llmg_2233 73590f1705f59a61c5787d4c167ac429 326 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 325 5.4E-125 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 llmg_2233 73590f1705f59a61c5787d4c167ac429 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 313 1.3E-55 T 14-10-2018 IPR016040 NAD(P)-binding domain llmg_2233 73590f1705f59a61c5787d4c167ac429 326 SUPERFAMILY SSF51735 1 325 1.54E-93 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2233 73590f1705f59a61c5787d4c167ac429 326 Gene3D G3DSA:3.40.50.720 3 264 8.0E-122 T 14-10-2018 llmg_2233 73590f1705f59a61c5787d4c167ac429 326 Gene3D G3DSA:3.90.25.10 185 319 8.0E-122 T 14-10-2018 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 Gene3D G3DSA:3.90.220.20 228 373 1.0E-76 T 14-10-2018 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 Gene3D G3DSA:1.10.287.1120 166 414 1.0E-76 T 14-10-2018 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 SUPERFAMILY SSF116734 214 415 2.13E-36 T 14-10-2018 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 Pfam PF01420 Type I restriction modification DNA specificity domain 225 404 1.0E-9 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 Pfam PF01420 Type I restriction modification DNA specificity domain 16 197 1.6E-17 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 SUPERFAMILY SSF116734 5 209 1.8E-49 T 14-10-2018 llmg_0660 e5640d7de24129f078ca3fbf589b478f 416 Gene3D G3DSA:3.90.220.20 16 165 1.0E-76 T 14-10-2018 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 564 27.241 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Pfam PF00750 tRNA synthetases class I (R) 94 435 4.7E-101 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 SUPERFAMILY SSF47323 444 564 2.01E-33 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 SUPERFAMILY SSF52374 109 444 2.31E-98 T 14-10-2018 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Gene3D G3DSA:3.40.50.620 109 443 7.7E-125 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 5 84 7.5E-18 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Gene3D G3DSA:1.10.730.10 444 564 9.0E-37 T 14-10-2018 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 SMART SM00836 450 564 1.4E-41 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Pfam PF05746 DALR anticodon binding domain 450 564 1.8E-34 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 SUPERFAMILY SSF55190 1 105 2.88E-26 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 564 1.5E-163 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 Gene3D G3DSA:3.30.1360.70 1 108 2.0E-27 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 SMART SM01016 5 84 4.9E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 PRINTS PR01038 Arginyl-tRNA synthetase signature 297 318 1.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_2314 9f4ffff467b41c5c4cae0aa02334b2c5 564 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.2E-18 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 8.5E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 15.691 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 Gene3D G3DSA:2.20.28.120 1 49 5.4E-20 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 Pfam PF00471 Ribosomal protein L33 3 49 2.7E-18 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0098 2a8b6d455851fd69443915ac075cc223 49 SUPERFAMILY SSF57829 1 49 2.62E-15 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 Pfam PF00436 Single-strand binding protein family 2 103 1.9E-37 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 166 4.6E-47 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.094 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 PIRSF PIRSF002070 1 154 1.5E-39 T 14-10-2018 llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 SUPERFAMILY SSF50249 1 166 1.82E-54 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2474 93ebbc814ae8d21a417e8bd05b8dbbbe 166 Gene3D G3DSA:2.40.50.140 1 111 9.3E-47 T 14-10-2018 llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 Gene3D G3DSA:3.90.230.10 135 362 1.0E-79 T 14-10-2018 llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 292 304 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 Pfam PF00557 Metallopeptidase family M24 141 346 1.4E-58 T 14-10-2018 IPR000994 Peptidase M24 llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 134 9.3E-25 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 SUPERFAMILY SSF53092 2 132 9.24E-29 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 SUPERFAMILY SSF55920 89 357 1.96E-77 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like llmg_0774 c16684970963f6f9b75015c77ae3cc54 362 Gene3D G3DSA:3.40.350.10 2 134 2.8E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 Pfam PF00216 Bacterial DNA-binding protein 3 91 1.9E-34 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 2.5E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 SMART SM00411 2 91 1.3E-45 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 Gene3D G3DSA:4.10.520.10 1 91 1.3E-38 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 llmg_0496 69e9a29fc2618af2c70aa1c0d7fa1f1a 91 SUPERFAMILY SSF47729 3 91 2.36E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 llmg_0873 567fc38cbc64aface3626782f33ac489 151 Pfam PF00293 NUDIX domain 20 144 9.6E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_0873 567fc38cbc64aface3626782f33ac489 151 SUPERFAMILY SSF55811 1 146 2.57E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_0873 567fc38cbc64aface3626782f33ac489 151 Gene3D G3DSA:3.90.79.10 1 148 5.4E-38 T 14-10-2018 llmg_0873 567fc38cbc64aface3626782f33ac489 151 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_0873 567fc38cbc64aface3626782f33ac489 151 PRINTS PR00502 NUDIX hydrolase family signature 42 56 1.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0873 567fc38cbc64aface3626782f33ac489 151 PRINTS PR00502 NUDIX hydrolase family signature 56 71 1.8E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_1221 9bcaf4e92fa3ae39f58cb566f5a3e8e9 79 SUPERFAMILY SSF47336 2 75 7.46E-15 T 14-10-2018 IPR036736 ACP-like superfamily llmg_1221 9bcaf4e92fa3ae39f58cb566f5a3e8e9 79 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 76 41.377 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 llmg_1221 9bcaf4e92fa3ae39f58cb566f5a3e8e9 79 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 2 74 3.8E-22 T 14-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 llmg_1221 9bcaf4e92fa3ae39f58cb566f5a3e8e9 79 Gene3D G3DSA:1.10.1200.10 1 78 9.2E-23 T 14-10-2018 IPR036736 ACP-like superfamily llmg_1221 9bcaf4e92fa3ae39f58cb566f5a3e8e9 79 Pfam PF00550 Phosphopantetheine attachment site 4 72 4.6E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain llmg_0928 d91871b3015efcc0320e2f3dbc40cba7 235 Gene3D G3DSA:3.40.50.1360 1 232 4.1E-94 T 14-10-2018 llmg_0928 d91871b3015efcc0320e2f3dbc40cba7 235 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 233 41.249 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 llmg_0928 d91871b3015efcc0320e2f3dbc40cba7 235 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 112 130 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 llmg_0928 d91871b3015efcc0320e2f3dbc40cba7 235 SUPERFAMILY SSF100950 1 233 3.44E-80 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_0928 d91871b3015efcc0320e2f3dbc40cba7 235 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 25 221 7.0E-17 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 llmg_2322 66db5a7ce28a01ed5432fba4b5ebc4a6 318 Gene3D G3DSA:3.40.710.10 1 306 1.4E-52 T 14-10-2018 llmg_2322 66db5a7ce28a01ed5432fba4b5ebc4a6 318 SUPERFAMILY SSF56601 5 299 3.07E-58 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_2322 66db5a7ce28a01ed5432fba4b5ebc4a6 318 Pfam PF00144 Beta-lactamase 10 302 6.0E-48 T 14-10-2018 IPR001466 Beta-lactamase-related llmg_1156 dad1f2ee814f2577af0b52f0b526d77b 108 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 12 107 4.6E-16 T 14-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 llmg_1156 dad1f2ee814f2577af0b52f0b526d77b 108 Gene3D G3DSA:3.40.30.10 1 93 2.2E-17 T 14-10-2018 llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 92 4.2E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 Pfam PF00107 Zinc-binding dehydrogenase 156 242 4.7E-10 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 SUPERFAMILY SSF51735 123 225 1.48E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 Gene3D G3DSA:3.90.180.10 9 300 2.4E-62 T 14-10-2018 llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 SUPERFAMILY SSF50129 3 152 6.54E-25 T 14-10-2018 IPR011032 GroES-like superfamily llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 Gene3D G3DSA:3.40.50.720 129 252 2.4E-62 T 14-10-2018 llmg_0245 3a08ad199ff39cf78698ca2a0a4e64aa 303 SMART SM00829 11 301 3.2E-13 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 llmg_1073 bf14c3b52706a64e6b60ec573ac5fd58 238 SUPERFAMILY SSF53098 87 214 8.47E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1073 bf14c3b52706a64e6b60ec573ac5fd58 238 Pfam PF13276 HTH-like domain 15 63 2.9E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_1073 bf14c3b52706a64e6b60ec573ac5fd58 238 Gene3D G3DSA:3.30.420.10 89 226 1.8E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1073 bf14c3b52706a64e6b60ec573ac5fd58 238 Pfam PF00665 Integrase core domain 92 206 7.1E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 SUPERFAMILY SSF55205 1 419 8.5E-124 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 408 6.4E-79 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 Gene3D G3DSA:3.65.10.10 21 232 9.7E-147 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 Gene3D G3DSA:3.65.10.10 6 415 9.7E-147 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.1E-143 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_0326 fad39369db6d6bd9bb25fe002803c769 420 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 418 39.044 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 llmg_1726 c3606e5127d3cb69127050f51755bd98 261 Pfam PF16285 Domain of unknown function (DUF4931) 11 254 1.7E-86 T 14-10-2018 llmg_1726 c3606e5127d3cb69127050f51755bd98 261 PIRSF PIRSF031505 1 260 2.4E-132 T 14-10-2018 IPR012361 Galactose-1-phosphate uridylyltransferase, short form, putative llmg_1726 c3606e5127d3cb69127050f51755bd98 261 Gene3D G3DSA:3.30.428.10 60 134 1.2E-10 T 14-10-2018 IPR036265 HIT-like superfamily llmg_1726 c3606e5127d3cb69127050f51755bd98 261 SUPERFAMILY SSF54197 17 132 1.7E-23 T 14-10-2018 IPR036265 HIT-like superfamily llmg_1042 95a231927288000a4403f2570c9d00e0 253 Gene3D G3DSA:3.20.20.70 1 253 6.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1042 95a231927288000a4403f2570c9d00e0 253 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 253 30.286 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1042 95a231927288000a4403f2570c9d00e0 253 SUPERFAMILY SSF51366 3 248 3.22E-68 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 llmg_1042 95a231927288000a4403f2570c9d00e0 253 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 243 5.5E-61 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1042 95a231927288000a4403f2570c9d00e0 253 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 46 59 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_1042 95a231927288000a4403f2570c9d00e0 253 Pfam PF00290 Tryptophan synthase alpha chain 7 243 1.6E-89 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 llmg_0797 b8d9871f4bfe0461282556e96ca82c8a 237 Pfam PF08346 AntA/AntB antirepressor 17 84 1.4E-26 T 14-10-2018 IPR013557 AntA/AntB antirepressor llmg_0797 b8d9871f4bfe0461282556e96ca82c8a 237 Pfam PF10552 ORF6C domain 113 224 5.0E-33 T 14-10-2018 IPR018878 ORF6C domain llmg_1991 1807912bfff06a686c93fa1e5a759816 340 SUPERFAMILY SSF51735 137 310 1.47E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1991 1807912bfff06a686c93fa1e5a759816 340 SUPERFAMILY SSF50129 1 179 1.98E-48 T 14-10-2018 IPR011032 GroES-like superfamily llmg_1991 1807912bfff06a686c93fa1e5a759816 340 Gene3D G3DSA:3.90.180.10 25 335 1.4E-126 T 14-10-2018 llmg_1991 1807912bfff06a686c93fa1e5a759816 340 Gene3D G3DSA:3.40.50.720 148 287 1.4E-126 T 14-10-2018 llmg_1991 1807912bfff06a686c93fa1e5a759816 340 Pfam PF00107 Zinc-binding dehydrogenase 174 300 5.1E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 llmg_1991 1807912bfff06a686c93fa1e5a759816 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 llmg_1991 1807912bfff06a686c93fa1e5a759816 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 133 3.8E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 llmg_1991 1807912bfff06a686c93fa1e5a759816 340 SMART SM00829 7 336 7.4E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 llmg_1930 33107a348d66ecf56b1e20bf4b7e0ffd 354 Pfam PF04892 VanZ like family 48 191 2.4E-24 T 14-10-2018 IPR006976 VanZ-like llmg_1930 33107a348d66ecf56b1e20bf4b7e0ffd 354 PIRSF PIRSF031578 1 354 3.1E-119 T 14-10-2018 IPR021192 Uncharacterised conserved protein UCP031578, VanZ/RDD-type llmg_0460 4f3dcf88cff05b7c4352841d32ec1f7c 172 Pfam PF00583 Acetyltransferase (GNAT) family 50 144 5.7E-19 T 14-10-2018 IPR000182 GNAT domain llmg_0460 4f3dcf88cff05b7c4352841d32ec1f7c 172 SUPERFAMILY SSF55729 2 171 9.45E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0460 4f3dcf88cff05b7c4352841d32ec1f7c 172 Gene3D G3DSA:3.40.630.30 1 169 1.9E-36 T 14-10-2018 llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 SUPERFAMILY SSF56784 10 258 7.57E-55 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 11 254 4.6E-51 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 254 6.2E-51 T 14-10-2018 llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 Gene3D G3DSA:3.40.50.1000 10 251 1.6E-57 T 14-10-2018 IPR023214 HAD superfamily llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 10 228 3.1E-22 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 Gene3D G3DSA:3.30.1240.10 86 185 1.6E-57 T 14-10-2018 llmg_0765 64b99cf650ba28dd0713cf97713bba6e 261 ProSitePatterns PS01228 Hypothetical cof family signature 1. 10 21 - T 14-10-2018 llmg_1975 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 66 118 1.9E-9 T 14-10-2018 llmg_1975 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 8 57 5.0E-7 T 14-10-2018 llmg_1975 3f090e430cdf1e61f194d8c62ca119de 189 Gene3D G3DSA:1.10.10.60 62 157 1.1E-6 T 14-10-2018 llmg_1975 3f090e430cdf1e61f194d8c62ca119de 189 SUPERFAMILY SSF48295 36 118 1.88E-17 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_1071 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 66 118 1.9E-9 T 14-10-2018 llmg_1071 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 8 57 5.0E-7 T 14-10-2018 llmg_1071 3f090e430cdf1e61f194d8c62ca119de 189 Gene3D G3DSA:1.10.10.60 62 157 1.1E-6 T 14-10-2018 llmg_1071 3f090e430cdf1e61f194d8c62ca119de 189 SUPERFAMILY SSF48295 36 118 1.88E-17 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_2175 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 66 118 1.9E-9 T 14-10-2018 llmg_2175 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 8 57 5.0E-7 T 14-10-2018 llmg_2175 3f090e430cdf1e61f194d8c62ca119de 189 Gene3D G3DSA:1.10.10.60 62 157 1.1E-6 T 14-10-2018 llmg_2175 3f090e430cdf1e61f194d8c62ca119de 189 SUPERFAMILY SSF48295 36 118 1.88E-17 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_0088 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 66 118 1.9E-9 T 14-10-2018 llmg_0088 3f090e430cdf1e61f194d8c62ca119de 189 Pfam PF13518 Helix-turn-helix domain 8 57 5.0E-7 T 14-10-2018 llmg_0088 3f090e430cdf1e61f194d8c62ca119de 189 Gene3D G3DSA:1.10.10.60 62 157 1.1E-6 T 14-10-2018 llmg_0088 3f090e430cdf1e61f194d8c62ca119de 189 SUPERFAMILY SSF48295 36 118 1.88E-17 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Gene3D G3DSA:3.40.50.970 362 540 4.7E-113 T 14-10-2018 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 539 6.9E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 178 5.9E-56 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 SUPERFAMILY SSF52518 7 190 2.22E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 562 1.3E-222 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 335 4.0E-38 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 SUPERFAMILY SSF52518 369 561 2.32E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Gene3D G3DSA:3.40.50.970 2 184 3.4E-68 T 14-10-2018 llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 SUPERFAMILY SSF52467 194 360 3.82E-52 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily llmg_1279 391f561d8baba28f5328cd91e46b9af0 574 Gene3D G3DSA:3.40.50.1220 202 361 4.7E-113 T 14-10-2018 llmg_2134 585c2cc8ce9fbd57d67749ab37e2c2b0 252 Pfam PF02498 BRO family, N-terminal domain 14 99 3.8E-27 T 14-10-2018 IPR003497 BRO N-terminal domain llmg_2134 585c2cc8ce9fbd57d67749ab37e2c2b0 252 SMART SM01040 13 99 1.4E-38 T 14-10-2018 IPR003497 BRO N-terminal domain llmg_2134 585c2cc8ce9fbd57d67749ab37e2c2b0 252 Pfam PF03374 Phage antirepressor protein KilAC domain 141 247 1.8E-27 T 14-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 llmg_0891 c98e80c024cc537224095331c066beae 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 15 422 2.2E-121 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 llmg_0891 c98e80c024cc537224095331c066beae 430 Pfam PF00860 Permease family 18 398 5.2E-93 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 llmg_0891 c98e80c024cc537224095331c066beae 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 345 365 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 llmg_2408 ac52d909e11e9e43e91e0ab21d4d1268 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 14-10-2018 IPR001482 Type II/IV secretion system protein llmg_2408 ac52d909e11e9e43e91e0ab21d4d1268 326 Gene3D G3DSA:3.40.50.300 114 320 3.4E-42 T 14-10-2018 llmg_2408 ac52d909e11e9e43e91e0ab21d4d1268 326 Pfam PF00437 Type II/IV secretion system protein 10 265 3.6E-38 T 14-10-2018 IPR001482 Type II/IV secretion system protein llmg_2408 ac52d909e11e9e43e91e0ab21d4d1268 326 SUPERFAMILY SSF52540 3 265 7.64E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2408 ac52d909e11e9e43e91e0ab21d4d1268 326 Gene3D G3DSA:3.30.450.90 1 109 1.8E-13 T 14-10-2018 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Gene3D G3DSA:3.30.1360.120 1 125 1.5E-48 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Gene3D G3DSA:1.20.120.430 126 455 1.8E-103 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 367 4.0E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 8 455 33.851 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 SUPERFAMILY SSF52540 80 371 3.56E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Gene3D G3DSA:3.40.50.300 223 383 1.8E-103 T 14-10-2018 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 SUPERFAMILY SSF116878 126 455 2.62E-48 T 14-10-2018 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 15 455 4.5E-125 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Pfam PF01926 50S ribosome-binding GTPase 225 337 3.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 9 125 5.9E-40 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 llmg_2521 f5c735b415a55a62dca9d3205b5af07d 455 Pfam PF12631 MnmE helical domain 128 452 9.4E-57 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 llmg_0924 5015fd3bd6a5c3f3f44c3738d84f6770 353 Pfam PF11797 Protein of unknown function C-terminal (DUF3324) 147 302 3.7E-48 T 14-10-2018 IPR021759 Domain of unknown function DUF3324, C-terminal llmg_0924 5015fd3bd6a5c3f3f44c3738d84f6770 353 Pfam PF06030 Bacterial protein of unknown function (DUF916) 18 136 2.1E-40 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative llmg_1303 8d9d7e4769d3b5bd18e4c21367b8a296 159 PIRSF PIRSF005859 1 159 7.7E-43 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 llmg_1303 8d9d7e4769d3b5bd18e4c21367b8a296 159 Gene3D G3DSA:1.20.1260.100 5 159 2.5E-38 T 14-10-2018 IPR038330 TspO/MBR-related superfamily llmg_1303 8d9d7e4769d3b5bd18e4c21367b8a296 159 Pfam PF03073 TspO/MBR family 16 156 1.6E-34 T 14-10-2018 IPR004307 TspO/MBR-related protein GO:0016021 llmg_2365 875fa2980212db82ec2b624ec62fd302 115 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 115 3.3E-42 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2365 875fa2980212db82ec2b624ec62fd302 115 SUPERFAMILY SSF53137 7 113 3.27E-50 T 14-10-2018 llmg_2365 875fa2980212db82ec2b624ec62fd302 115 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 115 27.787 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2365 875fa2980212db82ec2b624ec62fd302 115 Gene3D G3DSA:3.30.420.100 5 115 3.9E-41 T 14-10-2018 llmg_2365 875fa2980212db82ec2b624ec62fd302 115 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 115 2.3E-45 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 SMART SM00046 2 130 1.4E-4 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 127 6.7E-33 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 Gene3D G3DSA:2.60.200.40 126 288 5.1E-76 T 14-10-2018 llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 SUPERFAMILY SSF111331 1 302 1.26E-71 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 Gene3D G3DSA:3.40.50.10330 5 125 5.1E-76 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 llmg_0445 2d171bbcafbb5263869b09ecea991de8 342 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 2 301 2.2E-75 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SUPERFAMILY SSF50249 265 352 5.59E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SUPERFAMILY SSF50249 106 187 2.5E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Pfam PF00575 S1 RNA binding domain 106 174 2.5E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Pfam PF00575 S1 RNA binding domain 192 263 1.3E-23 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Pfam PF00575 S1 RNA binding domain 277 349 5.6E-24 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Pfam PF00575 S1 RNA binding domain 15 78 1.3E-7 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Gene3D G3DSA:2.40.50.140 103 181 1.3E-12 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Gene3D G3DSA:2.40.50.140 270 354 1.5E-32 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Gene3D G3DSA:2.40.50.140 190 269 2.2E-30 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SUPERFAMILY SSF50249 187 286 1.42E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 215 236 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 293 312 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 129 146 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 332 350 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 111 127 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 158 178 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 PRINTS PR00681 Ribosomal protein S1 signature 17 35 5.1E-43 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 Gene3D G3DSA:2.40.50.140 1 102 1.5E-11 T 14-10-2018 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SMART SM00316 15 92 6.1E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SMART SM00316 193 263 1.4E-29 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SMART SM00316 106 174 2.7E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SMART SM00316 278 349 7.7E-30 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1724 2db605a95c79dedbdd738e6e5ed53467 408 SUPERFAMILY SSF50249 7 104 1.34E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1180 05072e44c1f31300352cc0786957bbc3 248 Gene3D G3DSA:2.30.30.60 125 176 4.4E-9 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily llmg_1180 05072e44c1f31300352cc0786957bbc3 248 Pfam PF00924 Mechanosensitive ion channel 68 202 7.6E-29 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 llmg_1180 05072e44c1f31300352cc0786957bbc3 248 SUPERFAMILY SSF82861 24 106 4.84E-13 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 llmg_1180 05072e44c1f31300352cc0786957bbc3 248 SUPERFAMILY SSF50182 109 174 1.28E-8 T 14-10-2018 IPR010920 LSM domain superfamily llmg_1448 75b8edb3c17b4bb2be283b2aac4685a7 917 Pfam PF01336 OB-fold nucleic acid binding domain 690 775 1.0E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 llmg_1448 75b8edb3c17b4bb2be283b2aac4685a7 917 Gene3D G3DSA:2.40.50.140 638 785 1.7E-26 T 14-10-2018 llmg_1448 75b8edb3c17b4bb2be283b2aac4685a7 917 SUPERFAMILY SSF50249 638 781 2.94E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1448 75b8edb3c17b4bb2be283b2aac4685a7 917 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 273 571 2.8E-82 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal llmg_1448 75b8edb3c17b4bb2be283b2aac4685a7 917 Pfam PF16995 Transmembrane region of lysyl-tRNA synthetase 23 212 2.2E-15 T 14-10-2018 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region KEGG: 00970+6.1.1.6 llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 SUPERFAMILY SSF53187 2 369 8.55E-46 T 14-10-2018 llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 Pfam PF07687 Peptidase dimerisation domain 172 266 1.4E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 Gene3D G3DSA:3.30.70.360 175 290 1.3E-66 T 14-10-2018 llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 Gene3D G3DSA:3.40.630.10 7 361 1.3E-66 T 14-10-2018 llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 Pfam PF01546 Peptidase family M20/M25/M40 65 367 1.0E-26 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_0536 51f3efd39a6a3e7a8a922fed6b2419a2 373 SUPERFAMILY SSF55031 176 279 4.01E-7 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_1292 3789883559e74da80f0d94a65a2136b8 202 Pfam PF00117 Glutamine amidotransferase class-I 6 199 1.0E-21 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_1292 3789883559e74da80f0d94a65a2136b8 202 PIRSF PIRSF000495 2 202 1.2E-70 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 llmg_1292 3789883559e74da80f0d94a65a2136b8 202 Gene3D G3DSA:3.40.50.880 1 202 4.9E-74 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1292 3789883559e74da80f0d94a65a2136b8 202 SUPERFAMILY SSF52317 4 200 2.7E-55 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1292 3789883559e74da80f0d94a65a2136b8 202 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 201 35.164 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 llmg_1292 3789883559e74da80f0d94a65a2136b8 202 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 200 4.6E-71 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 llmg_1863 74b6dc1cbbde1a3adef5b5e44767fd8a 331 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 325 4.9E-91 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 llmg_1863 74b6dc1cbbde1a3adef5b5e44767fd8a 331 PIRSF PIRSF000267 1 331 4.9E-93 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 llmg_1863 74b6dc1cbbde1a3adef5b5e44767fd8a 331 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 223 1.3E-57 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 llmg_1163 1291ce773997fd691102b291f7384777 435 Gene3D G3DSA:3.40.190.10 25 428 5.7E-37 T 14-10-2018 llmg_1163 1291ce773997fd691102b291f7384777 435 SUPERFAMILY SSF53850 44 427 1.87E-32 T 14-10-2018 llmg_1163 1291ce773997fd691102b291f7384777 435 Pfam PF01547 Bacterial extracellular solute-binding protein 56 335 7.6E-12 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_2476 92346995c192e26f303ff4cdc5324569 284 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 277 17.407 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 llmg_2476 92346995c192e26f303ff4cdc5324569 284 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 270 4.4E-65 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 llmg_2476 92346995c192e26f303ff4cdc5324569 284 Pfam PF02673 Bacitracin resistance protein BacA 6 272 1.7E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 SUPERFAMILY SSF48013 3 127 4.58E-31 T 14-10-2018 IPR035926 NusB-like superfamily llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 SUPERFAMILY SSF53335 142 422 3.28E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 304 315 - T 14-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 Pfam PF01189 16S rRNA methyltransferase RsmB/F 228 420 3.9E-54 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 Gene3D G3DSA:3.40.50.150 139 421 9.0E-69 T 14-10-2018 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 Pfam PF01029 NusB family 4 125 5.0E-28 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 404 421 7.0E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 247 7.0E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 355 371 7.0E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 305 317 7.0E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 208 222 7.0E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 421 2.3E-96 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 llmg_2081 e11025cc15d4866870a699903e2ba3fb 424 Gene3D G3DSA:1.10.940.10 1 138 2.6E-33 T 14-10-2018 IPR035926 NusB-like superfamily llmg_2157 ef08a3d1eb91a9c140e28b10eeea33c0 237 Gene3D G3DSA:3.40.50.1360 1 237 1.1E-54 T 14-10-2018 llmg_2157 ef08a3d1eb91a9c140e28b10eeea33c0 237 SUPERFAMILY SSF100950 1 235 3.17E-53 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_2157 ef08a3d1eb91a9c140e28b10eeea33c0 237 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 113 131 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 llmg_2157 ef08a3d1eb91a9c140e28b10eeea33c0 237 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 15 220 4.9E-20 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 333 2.0E-39 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 Gene3D G3DSA:3.40.50.1970 10 153 1.4E-20 T 14-10-2018 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 145 173 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 PIRSF PIRSF000112 1 358 1.9E-120 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 SUPERFAMILY SSF56796 12 328 2.22E-50 T 14-10-2018 llmg_0945 f8d85ac5e729fd7e6f5ef32a0fcddb7e 359 Gene3D G3DSA:1.20.1090.10 155 359 7.0E-53 T 14-10-2018 llmg_1551 3bcd822b6f509c3897e3860c10ac55b3 267 Pfam PF01226 Formate/nitrite transporter 6 246 5.7E-69 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 llmg_1551 3bcd822b6f509c3897e3860c10ac55b3 267 Gene3D G3DSA:1.20.1080.10 3 261 9.3E-73 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_1551 3bcd822b6f509c3897e3860c10ac55b3 267 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 75 84 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site llmg_1169 44ac0bcbdc936f8b006f94d9e273367b 664 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 437 660 7.1E-84 T 14-10-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 llmg_1169 44ac0bcbdc936f8b006f94d9e273367b 664 Gene3D G3DSA:3.20.20.80 111 457 1.3E-147 T 14-10-2018 llmg_1169 44ac0bcbdc936f8b006f94d9e273367b 664 SUPERFAMILY SSF51445 113 664 7.72E-206 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1169 44ac0bcbdc936f8b006f94d9e273367b 664 Gene3D G3DSA:3.90.1330.10 458 664 9.9E-77 T 14-10-2018 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily GO:0005576|GO:0045493|GO:0046559 llmg_1169 44ac0bcbdc936f8b006f94d9e273367b 664 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 103 436 1.3E-129 T 14-10-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.969 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 SUPERFAMILY SSF55681 117 418 1.13E-108 T 14-10-2018 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PIRSF PIRSF001529 1 423 1.4E-181 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 9.0E-171 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 Gene3D G3DSA:3.30.930.10 106 423 7.4E-130 T 14-10-2018 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 SUPERFAMILY SSF46589 1 113 1.2E-28 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 8.1E-30 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 Gene3D G3DSA:1.10.287.40 1 105 5.5E-22 T 14-10-2018 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 7.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 7.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 7.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 7.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 7.1E-33 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 llmg_0722 4e612598cd203d85fb80a770dfb5cd14 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 218 399 3.5E-38 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 SUPERFAMILY SSF47781 64 132 3.89E-20 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Gene3D G3DSA:2.40.50.140 1 64 1.9E-17 T 14-10-2018 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Pfam PF07499 RuvA, C-terminal domain 151 196 5.7E-13 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 SUPERFAMILY SSF46929 151 196 1.57E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Pfam PF14520 Helix-hairpin-helix domain 71 127 1.6E-12 T 14-10-2018 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 SMART SM00278 72 91 0.23 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 SMART SM00278 107 126 5.8 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Gene3D G3DSA:1.10.150.20 66 139 3.0E-23 T 14-10-2018 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Pfam PF01330 RuvA N terminal domain 1 61 1.2E-19 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 SUPERFAMILY SSF50249 1 62 1.03E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 196 6.1E-54 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Gene3D G3DSA:1.10.8.10 149 196 1.3E-8 T 14-10-2018 llmg_2488 1717658b7c614feacaa522cd4d38d67b 197 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 30.054 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 llmg_2070 1258de61834d4e28b53fd7a8dfd8f173 224 SMART SM00471 15 179 6.2E-4 T 14-10-2018 IPR003607 HD/PDEase domain llmg_2070 1258de61834d4e28b53fd7a8dfd8f173 224 SUPERFAMILY SSF109604 7 169 2.77E-14 T 14-10-2018 llmg_2070 1258de61834d4e28b53fd7a8dfd8f173 224 Pfam PF01966 HD domain 20 168 2.0E-14 T 14-10-2018 IPR006674 HD domain llmg_1708 957a599ff1f930900ba9d643e8fc772d 397 Pfam PF01501 Glycosyl transferase family 8 6 256 8.1E-24 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 llmg_1708 957a599ff1f930900ba9d643e8fc772d 397 SUPERFAMILY SSF53448 6 276 3.37E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1708 957a599ff1f930900ba9d643e8fc772d 397 Gene3D G3DSA:3.90.550.10 4 279 2.7E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1571 303a5bb93f3c477201ea809df1694d40 379 Pfam PF07687 Peptidase dimerisation domain 179 276 4.3E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain llmg_1571 303a5bb93f3c477201ea809df1694d40 379 Gene3D G3DSA:3.30.70.360 174 288 2.1E-128 T 14-10-2018 llmg_1571 303a5bb93f3c477201ea809df1694d40 379 SUPERFAMILY SSF53187 4 375 9.43E-77 T 14-10-2018 llmg_1571 303a5bb93f3c477201ea809df1694d40 379 SUPERFAMILY SSF55031 174 291 2.22E-29 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain llmg_1571 303a5bb93f3c477201ea809df1694d40 379 Pfam PF01546 Peptidase family M20/M25/M40 66 370 2.4E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 llmg_1571 303a5bb93f3c477201ea809df1694d40 379 PIRSF PIRSF005962 1 377 1.9E-122 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_1571 303a5bb93f3c477201ea809df1694d40 379 Gene3D G3DSA:3.40.630.10 10 360 2.1E-128 T 14-10-2018 llmg_1571 303a5bb93f3c477201ea809df1694d40 379 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 10 363 4.4E-113 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 llmg_0612 562a1c54cc8f87679ff6d7ed3de586a6 96 Gene3D G3DSA:1.10.10.60 7 87 1.4E-9 T 14-10-2018 llmg_0612 562a1c54cc8f87679ff6d7ed3de586a6 96 Pfam PF01527 Transposase 2 75 1.7E-19 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0612 562a1c54cc8f87679ff6d7ed3de586a6 96 SUPERFAMILY SSF46689 1 93 1.13E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 SUPERFAMILY SSF48008 82 208 5.75E-17 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 SMART SM00895 80 205 1.3E-10 T 14-10-2018 IPR011711 GntR, C-terminal llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 Gene3D G3DSA:1.10.10.10 5 71 9.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 SMART SM00345 12 70 8.5E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 Gene3D G3DSA:1.20.120.530 83 208 1.0E-16 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 SUPERFAMILY SSF46785 7 74 4.95E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 Pfam PF07729 FCD domain 84 204 4.1E-19 T 14-10-2018 IPR011711 GntR, C-terminal llmg_0857 27c974de2b9ce44b3ae20c1993cc4ba4 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.2E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 llmg_2434 7e0fac2f3b5215543b5d603754c45ca4 165 Gene3D G3DSA:3.40.109.10 1 164 3.9E-16 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_2434 7e0fac2f3b5215543b5d603754c45ca4 165 Pfam PF00881 Nitroreductase family 23 157 3.3E-8 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_2434 7e0fac2f3b5215543b5d603754c45ca4 165 SUPERFAMILY SSF55469 40 152 9.57E-9 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 PIRSF PIRSF006769 1 362 2.3E-132 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 359 3.0E-61 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 357 2.3E-108 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 100 4.2E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 Gene3D G3DSA:3.40.430.10 137 360 2.9E-68 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 SUPERFAMILY SSF53597 147 357 5.44E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 Gene3D G3DSA:3.40.140.10 1 136 2.6E-46 T 14-10-2018 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 Pfam PF01872 RibD C-terminal domain 148 336 5.5E-50 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 llmg_1532 5a3d701d422885da9d97851f0020f5aa 362 SUPERFAMILY SSF53927 4 145 1.01E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 llmg_2096 c24d098f52bc8365fa16e1274243c27b 404 SUPERFAMILY SSF56563 119 392 4.97E-41 T 14-10-2018 llmg_2096 c24d098f52bc8365fa16e1274243c27b 404 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 8 388 8.6E-71 T 14-10-2018 IPR024455 Phage capsid llmg_2096 c24d098f52bc8365fa16e1274243c27b 404 Gene3D G3DSA:3.30.2320.10 257 385 3.2E-6 T 14-10-2018 llmg_2096 c24d098f52bc8365fa16e1274243c27b 404 Gene3D G3DSA:3.30.2400.10 342 380 3.2E-6 T 14-10-2018 llmg_2096 c24d098f52bc8365fa16e1274243c27b 404 Pfam PF05065 Phage capsid family 125 389 6.0E-39 T 14-10-2018 IPR024455 Phage capsid llmg_2133 7a04962c90ebffc93cef6af550d3cb5c 89 SUPERFAMILY SSF46955 44 88 8.61E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 SUPERFAMILY SSF143034 2 62 4.19E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 Gene3D G3DSA:2.40.50.530 1 63 4.7E-17 T 14-10-2018 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.545 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 1.2E-20 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.6E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 llmg_2030 aef6a80873bdd9b2ddf0ce73c28ab100 66 Pfam PF01632 Ribosomal protein L35 2 61 3.4E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0647 90e0c649d628e508f9c04d819ad5fac3 279 Pfam PF00665 Integrase core domain 118 233 6.3E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0647 90e0c649d628e508f9c04d819ad5fac3 279 Gene3D G3DSA:3.30.420.10 112 271 2.6E-23 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0647 90e0c649d628e508f9c04d819ad5fac3 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0647 90e0c649d628e508f9c04d819ad5fac3 279 SUPERFAMILY SSF53098 115 277 2.02E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0992 4df28c400a77c6c7f2b3633ffb6d2441 345 Gene3D G3DSA:3.40.50.720 1 340 2.9E-78 T 14-10-2018 llmg_0992 4df28c400a77c6c7f2b3633ffb6d2441 345 SUPERFAMILY SSF51735 3 335 2.04E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0992 4df28c400a77c6c7f2b3633ffb6d2441 345 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 243 3.6E-24 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 llmg_0970 433c7c7e19fe4d67e44cb474503143b9 104 Pfam PF02627 Carboxymuconolactone decarboxylase family 16 100 1.3E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 llmg_0970 433c7c7e19fe4d67e44cb474503143b9 104 SUPERFAMILY SSF69118 8 103 5.76E-25 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 llmg_0970 433c7c7e19fe4d67e44cb474503143b9 104 Gene3D G3DSA:1.20.1290.10 2 104 5.7E-30 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 SMART SM00382 28 229 0.54 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 SMART SM00382 355 516 0.38 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 Gene3D G3DSA:3.40.50.300 1 255 6.6E-41 T 14-10-2018 llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 Pfam PF00005 ABC transporter 347 472 5.7E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 Pfam PF00005 ABC transporter 22 176 1.2E-14 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 SUPERFAMILY SSF52540 319 515 1.18E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 SUPERFAMILY SSF52540 4 236 3.48E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 Gene3D G3DSA:3.40.50.300 322 516 6.1E-36 T 14-10-2018 llmg_1639 5bb597ace234ddb53e3fb85da4f4e456 516 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 Gene3D G3DSA:3.40.390.10 395 627 2.1E-79 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 SUPERFAMILY SSF55486 5 627 2.56E-171 T 14-10-2018 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 Pfam PF05649 Peptidase family M13 5 381 4.8E-62 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 535 546 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 426 438 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 465 481 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 444 456 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 Gene3D G3DSA:1.10.1380.10 30 362 2.4E-88 T 14-10-2018 llmg_0702 11b4ae3e6f61e799215c5e08adfeb71b 627 Pfam PF01431 Peptidase family M13 434 624 2.1E-71 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_0112 8e4f06f51134f66b61ea14de0b03c3ea 318 Pfam PF01522 Polysaccharide deacetylase 138 265 1.3E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 llmg_0112 8e4f06f51134f66b61ea14de0b03c3ea 318 SUPERFAMILY SSF88713 103 269 1.74E-40 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 llmg_0112 8e4f06f51134f66b61ea14de0b03c3ea 318 Gene3D G3DSA:3.20.20.370 76 310 1.4E-60 T 14-10-2018 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 474 2.8E-165 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 Gene3D G3DSA:1.10.10.410 414 476 7.9E-22 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 Pfam PF02637 GatB domain 327 474 5.8E-51 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 SUPERFAMILY SSF55931 4 295 2.75E-117 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 SUPERFAMILY SSF89095 299 401 1.83E-30 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 475 36.865 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 SMART SM00845 327 474 9.2E-69 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 Gene3D G3DSA:1.10.150.380 299 412 2.5E-32 T 14-10-2018 llmg_0176 c6f51a3a3cf2a21ea7aef57be74b8175 477 Pfam PF02934 GatB/GatE catalytic domain 5 288 1.3E-109 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 llmg_0438 889442cf9a248e9eed213493108402d4 116 PIRSF PIRSF000699 6 115 2.2E-38 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 llmg_0438 889442cf9a248e9eed213493108402d4 116 SUPERFAMILY SSF46973 12 105 1.19E-32 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 llmg_0438 889442cf9a248e9eed213493108402d4 116 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 16 104 8.8E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 llmg_0438 889442cf9a248e9eed213493108402d4 116 Gene3D G3DSA:1.20.58.280 8 113 1.2E-33 T 14-10-2018 llmg_0035 e710470fe6c77aab326bb4648dbd0687 93 SUPERFAMILY SSF46955 41 91 1.37E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_0577 74d1db8402c8edebe139e9cfe0c97fe1 284 Hamap MF_01974 Methionine aminopeptidase [map]. 2 278 35.417 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 llmg_0577 74d1db8402c8edebe139e9cfe0c97fe1 284 Gene3D G3DSA:3.90.230.10 1 284 4.0E-87 T 14-10-2018 llmg_0577 74d1db8402c8edebe139e9cfe0c97fe1 284 SUPERFAMILY SSF55920 1 277 4.42E-66 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like llmg_0577 74d1db8402c8edebe139e9cfe0c97fe1 284 Pfam PF00557 Metallopeptidase family M24 11 101 2.3E-9 T 14-10-2018 IPR000994 Peptidase M24 llmg_0577 74d1db8402c8edebe139e9cfe0c97fe1 284 Pfam PF00557 Metallopeptidase family M24 129 269 8.3E-30 T 14-10-2018 IPR000994 Peptidase M24 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 Gene3D G3DSA:3.40.50.10490 39 224 4.0E-70 T 14-10-2018 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 SUPERFAMILY SSF53697 4 447 3.64E-133 T 14-10-2018 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 24.191 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 Gene3D G3DSA:3.40.50.10490 225 417 3.6E-74 T 14-10-2018 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 Pfam PF00342 Phosphoglucose isomerase 76 426 4.4E-24 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_2448 5b542e2a4f7778e038a6c3f75586ed65 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 3.7E-26 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 llmg_0535 a09c4adba1f1e48c64127223feff4d02 273 SMART SM00062 42 269 9.3E-43 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_0535 a09c4adba1f1e48c64127223feff4d02 273 Gene3D G3DSA:3.40.190.10 133 225 7.1E-66 T 14-10-2018 llmg_0535 a09c4adba1f1e48c64127223feff4d02 273 SUPERFAMILY SSF53850 6 264 1.0E-56 T 14-10-2018 llmg_0535 a09c4adba1f1e48c64127223feff4d02 273 Gene3D G3DSA:3.40.190.10 41 260 7.1E-66 T 14-10-2018 llmg_0535 a09c4adba1f1e48c64127223feff4d02 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 262 2.2E-48 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF llmg_1241 d58ec4d56d2cb25ed72bb33d2d1fd236 236 Gene3D G3DSA:3.30.420.40 128 235 8.4E-56 T 14-10-2018 llmg_1241 d58ec4d56d2cb25ed72bb33d2d1fd236 236 Pfam PF00480 ROK family 7 236 5.2E-46 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1241 d58ec4d56d2cb25ed72bb33d2d1fd236 236 Gene3D G3DSA:3.30.420.40 7 127 8.4E-56 T 14-10-2018 llmg_1241 d58ec4d56d2cb25ed72bb33d2d1fd236 236 SUPERFAMILY SSF53067 5 236 1.19E-40 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 Hamap MF_01685 Ferredoxin--NADP reductase. 3 320 35.973 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 llmg_0776 51530be21a5f44f210792276aed6358c 321 Gene3D G3DSA:3.50.50.60 5 296 1.5E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0776 51530be21a5f44f210792276aed6358c 321 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 289 1.0E-31 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.4E-20 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.4E-20 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.4E-20 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.4E-20 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.4E-20 T 14-10-2018 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 3.7E-27 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 3.7E-27 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 3.7E-27 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.7E-27 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 3.7E-27 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 llmg_0776 51530be21a5f44f210792276aed6358c 321 Gene3D G3DSA:3.50.50.60 123 238 1.5E-85 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0776 51530be21a5f44f210792276aed6358c 321 SUPERFAMILY SSF51905 1 304 8.94E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 Gene3D G3DSA:3.40.50.1820 71 318 4.8E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 Pfam PF12146 Serine aminopeptidase, S33 107 203 1.0E-15 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 SUPERFAMILY SSF53474 89 322 1.73E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 Pfam PF03959 Serine hydrolase (FSH1) 227 299 1.3E-6 T 14-10-2018 IPR005645 Serine hydrolase FSH llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 130 145 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_0927 2dd36eb8a9c4e7ee0fefbe94d66d24e5 323 PRINTS PR00111 Alpha/beta hydrolase fold signature 177 190 4.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 llmg_2270 6d879ee9c893279d4a24f6c70f9ffb89 339 PIRSF PIRSF037259 144 339 2.5E-57 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 llmg_2270 6d879ee9c893279d4a24f6c70f9ffb89 339 PIRSF PIRSF037259 1 157 2.9E-41 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 llmg_2270 6d879ee9c893279d4a24f6c70f9ffb89 339 Pfam PF05975 Bacterial ABC transporter protein EcsB 131 323 1.1E-40 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 llmg_2270 6d879ee9c893279d4a24f6c70f9ffb89 339 Pfam PF05975 Bacterial ABC transporter protein EcsB 3 154 1.5E-32 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 3 502 1.2E-215 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 790 22.34 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 SUPERFAMILY SSF53098 1 182 8.44E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Pfam PF13307 Helicase C-terminal domain 625 770 4.4E-26 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Gene3D G3DSA:3.30.420.10 1 170 2.4E-41 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Pfam PF00929 Exonuclease 6 160 1.3E-25 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Gene3D G3DSA:3.40.50.300 244 504 9.2E-29 T 14-10-2018 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 SUPERFAMILY SSF52540 268 749 5.66E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 173 7.9E-29 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 Gene3D G3DSA:3.40.50.300 598 779 4.9E-25 T 14-10-2018 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 SMART SM00491 635 757 3.7E-12 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 llmg_2021 9f8631916c6555ca20f3868bd198ff4a 791 SMART SM00479 3 169 7.5E-40 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 Gene3D G3DSA:3.30.70.100 3 66 2.5E-22 T 14-10-2018 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 PRINTS PR00944 Copper ion binding protein signature 40 52 1.5E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 PRINTS PR00944 Copper ion binding protein signature 2 14 1.5E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 PRINTS PR00944 Copper ion binding protein signature 14 27 1.5E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 PRINTS PR00944 Copper ion binding protein signature 52 65 1.5E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 PRINTS PR00944 Copper ion binding protein signature 27 40 1.5E-11 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 2 65 6.4E-19 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 SUPERFAMILY SSF55008 1 65 5.89E-19 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 llmg_1730 39c22a488cb2ff9851ed930c7e5df1e8 66 Pfam PF00403 Heavy-metal-associated domain 4 64 4.8E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 4.7E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 4.7E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 4.7E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 6.2E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.086 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 4.1E-45 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 SMART SM01403 7 101 1.7E-56 T 14-10-2018 IPR027486 Ribosomal protein S10 domain llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 Gene3D G3DSA:3.30.70.600 1 102 3.3E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily llmg_2384 be2b1310b13539de1947cfa2caa8fa7d 102 SUPERFAMILY SSF54999 5 102 2.88E-37 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily llmg_0347 7a4aa35b6f09e7a01af7e58897c87922 316 SUPERFAMILY SSF81345 4 313 2.62E-66 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_0347 7a4aa35b6f09e7a01af7e58897c87922 316 Gene3D G3DSA:1.10.3470.10 2 316 7.3E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_0347 7a4aa35b6f09e7a01af7e58897c87922 316 Pfam PF01032 FecCD transport family 17 313 1.2E-77 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 llmg_2526 aeeb3d1bd2d6f009427c581d58426bb4 200 SUPERFAMILY SSF47413 3 66 1.05E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_2526 aeeb3d1bd2d6f009427c581d58426bb4 200 Gene3D G3DSA:1.10.260.40 1 70 4.2E-12 T 14-10-2018 llmg_2526 aeeb3d1bd2d6f009427c581d58426bb4 200 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 3.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0397 3d27a85838655e72ee46f16000c62ac7 201 SUPERFAMILY SSF52218 1 195 7.96E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0397 3d27a85838655e72ee46f16000c62ac7 201 Pfam PF02525 Flavodoxin-like fold 3 193 3.6E-35 T 14-10-2018 IPR003680 Flavodoxin-like fold llmg_0397 3d27a85838655e72ee46f16000c62ac7 201 Gene3D G3DSA:3.40.50.360 1 201 1.2E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0397 3d27a85838655e72ee46f16000c62ac7 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 198 27.088 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 llmg_1470 577b55e8a43775e543a33b2791ec93a9 274 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 268 45.505 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 llmg_1470 577b55e8a43775e543a33b2791ec93a9 274 Gene3D G3DSA:3.40.50.620 1 274 8.1E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1470 577b55e8a43775e543a33b2791ec93a9 274 Pfam PF02540 NAD synthase 23 265 3.6E-64 T 14-10-2018 IPR022310 NAD/GMP synthase llmg_1470 577b55e8a43775e543a33b2791ec93a9 274 TIGRFAM TIGR00552 nadE: NAD+ synthetase 18 274 3.2E-70 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 llmg_1470 577b55e8a43775e543a33b2791ec93a9 274 SUPERFAMILY SSF52402 3 273 2.1E-82 T 14-10-2018 llmg_2459 a49b7ad55b15af3814ee47e94433385f 82 Pfam PF08930 Domain of unknown function (DUF1912) 1 82 3.2E-43 T 14-10-2018 IPR015026 Protein of unknown function DUF1912 llmg_2459 a49b7ad55b15af3814ee47e94433385f 82 Gene3D G3DSA:1.20.58.90 1 82 1.8E-41 T 14-10-2018 llmg_2459 a49b7ad55b15af3814ee47e94433385f 82 SUPERFAMILY SSF140121 1 76 1.57E-38 T 14-10-2018 IPR038024 SPy1572-like superfamily llmg_0500 327581002be68486c3a046308e9737a3 267 PRINTS PR01543 Arylamine N-acetyltransferase signature 77 99 3.3E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 llmg_0500 327581002be68486c3a046308e9737a3 267 PRINTS PR01543 Arylamine N-acetyltransferase signature 53 76 3.3E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 llmg_0500 327581002be68486c3a046308e9737a3 267 PRINTS PR01543 Arylamine N-acetyltransferase signature 29 52 3.3E-9 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 llmg_0500 327581002be68486c3a046308e9737a3 267 Pfam PF00797 N-acetyltransferase 29 262 3.6E-56 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 llmg_0500 327581002be68486c3a046308e9737a3 267 Gene3D G3DSA:3.30.2140.20 8 266 8.7E-64 T 14-10-2018 llmg_0500 327581002be68486c3a046308e9737a3 267 SUPERFAMILY SSF54001 11 264 5.64E-67 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_0807 04c6d096da529662f69c46a5b34acd1f 279 Pfam PF06926 Putative replisome organiser protein C-terminus 185 279 3.0E-51 T 14-10-2018 IPR009696 Putative replisome organiser, C-terminal llmg_0807 04c6d096da529662f69c46a5b34acd1f 279 Pfam PF14297 Domain of unknown function (DUF4373) 11 104 2.1E-19 T 14-10-2018 IPR025400 Domain of unknown function DUF4373 llmg_0181 38ccf3b053949c8fa3af18078c343dc2 177 Gene3D G3DSA:3.40.50.10420 1 175 9.4E-41 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily llmg_0181 38ccf3b053949c8fa3af18078c343dc2 177 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 169 8.5E-44 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase llmg_0181 38ccf3b053949c8fa3af18078c343dc2 177 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 168 4.0E-32 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase llmg_0181 38ccf3b053949c8fa3af18078c343dc2 177 SUPERFAMILY SSF100950 3 171 6.28E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_0181 38ccf3b053949c8fa3af18078c343dc2 177 PIRSF PIRSF006806 1 174 1.5E-41 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase llmg_1811 d8f1ddcbfee818cbc9979f935e27febf 217 Gene3D G3DSA:3.40.50.150 1 213 1.9E-69 T 14-10-2018 llmg_1811 d8f1ddcbfee818cbc9979f935e27febf 217 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 28 212 7.1E-51 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 llmg_1811 d8f1ddcbfee818cbc9979f935e27febf 217 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 214 28.402 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 llmg_1811 d8f1ddcbfee818cbc9979f935e27febf 217 SUPERFAMILY SSF53335 24 210 3.31E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1811 d8f1ddcbfee818cbc9979f935e27febf 217 Pfam PF02390 Putative methyltransferase 39 209 1.8E-45 T 14-10-2018 llmg_1191 78a3caa2887ac3332a07f3c608e8eca1 238 SUPERFAMILY SSF56349 7 238 2.94E-16 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1191 78a3caa2887ac3332a07f3c608e8eca1 238 Gene3D G3DSA:1.10.443.10 115 238 4.2E-9 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1191 78a3caa2887ac3332a07f3c608e8eca1 238 Gene3D G3DSA:1.10.150.130 5 85 9.3E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_1191 78a3caa2887ac3332a07f3c608e8eca1 238 Hamap MF_01817 Tyrosine recombinase XerD-like. 3 237 32.077 T 14-10-2018 IPR020876 Tyrosine recombinase XerD-like GO:0005737 llmg_0692 a21b3bb219b549ab59f817e8fe57e8e6 75 SUPERFAMILY SSF55008 2 68 7.07E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 llmg_0692 a21b3bb219b549ab59f817e8fe57e8e6 75 Pfam PF00403 Heavy-metal-associated domain 7 65 1.1E-9 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 llmg_0692 a21b3bb219b549ab59f817e8fe57e8e6 75 Gene3D G3DSA:3.30.70.100 1 72 3.7E-15 T 14-10-2018 llmg_0340 f1378f2d8dc1d14f791f5bdbc445855c 286 Pfam PF03180 NLPA lipoprotein 41 282 9.4E-90 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0340 f1378f2d8dc1d14f791f5bdbc445855c 286 Gene3D G3DSA:3.40.190.10 122 231 3.4E-82 T 14-10-2018 llmg_0340 f1378f2d8dc1d14f791f5bdbc445855c 286 Gene3D G3DSA:3.40.190.10 51 272 3.4E-82 T 14-10-2018 llmg_0340 f1378f2d8dc1d14f791f5bdbc445855c 286 SUPERFAMILY SSF53850 41 283 4.21E-71 T 14-10-2018 llmg_0340 f1378f2d8dc1d14f791f5bdbc445855c 286 PIRSF PIRSF002854 3 283 5.4E-85 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_1924 53e7481457e23560377fe2b5068f5f43 279 Gene3D G3DSA:3.30.70.260 184 276 4.2E-27 T 14-10-2018 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 Gene3D G3DSA:3.40.190.10 83 168 6.1E-50 T 14-10-2018 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 SUPERFAMILY SSF55021 173 272 5.61E-22 T 14-10-2018 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 SUPERFAMILY SSF53850 1 181 5.64E-50 T 14-10-2018 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 Pfam PF00800 Prephenate dehydratase 3 180 3.2E-55 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 Gene3D G3DSA:3.40.190.10 5 176 6.1E-50 T 14-10-2018 llmg_1924 53e7481457e23560377fe2b5068f5f43 279 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 154 176 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 llmg_2558 403b0478242cc547f2930b31be246c10 137 Pfam PF00164 Ribosomal protein S12/S23 31 136 2.6E-36 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 4.5E-57 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 SUPERFAMILY SSF50249 2 136 6.68E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2558 403b0478242cc547f2930b31be246c10 137 PIRSF PIRSF002133 1 137 7.2E-48 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.199 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2558 403b0478242cc547f2930b31be246c10 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2558 403b0478242cc547f2930b31be246c10 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.9E-65 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2558 403b0478242cc547f2930b31be246c10 137 Gene3D G3DSA:2.40.50.140 1 137 2.1E-59 T 14-10-2018 llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 Pfam PF12705 PD-(D/E)XK nuclease superfamily 755 1066 1.3E-35 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 Gene3D G3DSA:3.40.50.300 538 663 1.2E-13 T 14-10-2018 llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 Gene3D G3DSA:3.40.50.300 270 367 3.1E-13 T 14-10-2018 llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 TIGRFAM TIGR02774 rexB_recomb: ATP-dependent nuclease subunit B 3 1076 1.3E-234 T 14-10-2018 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 Hamap MF_01453 ATP-dependent helicase/deoxyribonuclease subunit B [rexB]. 1 1098 39.279 T 14-10-2018 IPR014141 DNA helicase subunit RexB GO:0016788|GO:0016817 llmg_0003 673c836e4bfb190fd9c9aa6f8a18b448 1099 SUPERFAMILY SSF52540 290 660 3.32E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0498 1386ff20d419be8dc139e97b21583c28 169 Gene3D G3DSA:1.10.10.10 77 166 1.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0498 1386ff20d419be8dc139e97b21583c28 169 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 134 140 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 llmg_0498 1386ff20d419be8dc139e97b21583c28 169 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 163 2.5E-26 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 llmg_0498 1386ff20d419be8dc139e97b21583c28 169 SUPERFAMILY SSF53155 3 83 3.92E-12 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 llmg_0498 1386ff20d419be8dc139e97b21583c28 169 Gene3D G3DSA:3.30.160.70 1 68 1.5E-11 T 14-10-2018 llmg_0498 1386ff20d419be8dc139e97b21583c28 169 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 164 2.4E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 llmg_0498 1386ff20d419be8dc139e97b21583c28 169 SUPERFAMILY SSF46767 79 164 3.53E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 llmg_0132 f057ebd2a5ef8257d541a2cc200520c7 106 Pfam PF00893 Small Multidrug Resistance protein 1 92 2.5E-28 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 llmg_0132 f057ebd2a5ef8257d541a2cc200520c7 106 SUPERFAMILY SSF103481 4 104 1.02E-18 T 14-10-2018 llmg_0132 f057ebd2a5ef8257d541a2cc200520c7 106 Gene3D G3DSA:1.10.3730.20 1 106 2.1E-31 T 14-10-2018 llmg_0076 dc4d915efabffd0234a63e42770ed4d9 284 SUPERFAMILY SSF51695 36 276 3.4E-62 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 llmg_0076 dc4d915efabffd0234a63e42770ed4d9 284 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 42 270 1.5E-38 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 llmg_0076 dc4d915efabffd0234a63e42770ed4d9 284 Gene3D G3DSA:3.20.20.190 29 279 1.3E-70 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 Pfam PF00226 DnaJ domain 43 94 1.6E-15 T 14-10-2018 IPR001623 DnaJ domain llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 Gene3D G3DSA:1.10.287.110 15 98 1.4E-16 T 14-10-2018 IPR036869 Chaperone J-domain superfamily llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 SUPERFAMILY SSF46565 15 92 5.23E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 PRINTS PR00625 DnaJ domain signature 78 98 1.8E-12 T 14-10-2018 IPR001623 DnaJ domain llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 PRINTS PR00625 DnaJ domain signature 62 77 1.8E-12 T 14-10-2018 IPR001623 DnaJ domain llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 PRINTS PR00625 DnaJ domain signature 44 62 1.8E-12 T 14-10-2018 IPR001623 DnaJ domain llmg_1400 c51376350bb654843fe1662d2b7d7fd7 99 SMART SM00271 41 98 1.6E-17 T 14-10-2018 IPR001623 DnaJ domain llmg_1282 a8e97b8be7a956254f5049deec0331ee 191 Gene3D G3DSA:3.20.19.10 1 171 1.0E-74 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 llmg_1282 a8e97b8be7a956254f5049deec0331ee 191 SUPERFAMILY SSF52016 1 188 5.49E-60 T 14-10-2018 llmg_1282 a8e97b8be7a956254f5049deec0331ee 191 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 183 3.5E-71 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 llmg_1282 a8e97b8be7a956254f5049deec0331ee 191 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 40.798 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 llmg_1282 a8e97b8be7a956254f5049deec0331ee 191 Pfam PF00694 Aconitase C-terminal domain 1 123 2.9E-43 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 PRINTS PR00502 NUDIX hydrolase family signature 42 56 7.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 PRINTS PR00502 NUDIX hydrolase family signature 56 71 7.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 Gene3D G3DSA:3.90.79.10 1 144 1.1E-31 T 14-10-2018 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 ProSitePatterns PS00893 Nudix box signature. 47 68 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 SUPERFAMILY SSF55811 1 147 2.57E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_0872 7fde9d44c21a0f634c23e9c59ef3e7c8 155 Pfam PF00293 NUDIX domain 23 127 8.8E-20 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 320 689 1.1E-152 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 SUPERFAMILY SSF74650 5 265 2.54E-77 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 17 264 1.6E-46 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Gene3D G3DSA:2.60.420.10 675 744 1.6E-17 T 14-10-2018 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 PIRSF PIRSF036289 1 751 2.2E-266 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 693 742 6.5E-13 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Gene3D G3DSA:1.50.10.10 314 674 4.9E-138 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 SUPERFAMILY SSF48208 270 739 3.63E-128 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_0745 dda77cb90669c0adfc875ade3f87ada4 751 Gene3D G3DSA:2.70.98.40 4 267 2.2E-74 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily llmg_0578 661ae7ab9a708a2b71039a3038030815 301 PIRSF PIRSF035875 1 299 7.7E-53 T 14-10-2018 IPR017039 Virulence factor BrkB llmg_0578 661ae7ab9a708a2b71039a3038030815 301 Pfam PF03631 Virulence factor BrkB 26 280 5.4E-42 T 14-10-2018 IPR017039 Virulence factor BrkB llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 SMART SM01374 1 122 7.2E-83 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 Gene3D G3DSA:2.40.150.20 1 122 1.3E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 4.9E-54 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 SUPERFAMILY SSF50193 1 122 6.15E-49 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.6E-52 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 llmg_2373 e62f0dde0e7a11058e010eff2957b072 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.192 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 llmg_2551 e6411256329af4e20206836f55af4cd5 271 Gene3D G3DSA:3.40.50.2020 73 270 2.9E-49 T 14-10-2018 llmg_2551 e6411256329af4e20206836f55af4cd5 271 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 1 268 8.7E-106 T 14-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 llmg_2551 e6411256329af4e20206836f55af4cd5 271 Pfam PF09182 Bacterial purine repressor, N-terminal 2 71 3.8E-27 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 llmg_2551 e6411256329af4e20206836f55af4cd5 271 SUPERFAMILY SSF53271 83 239 3.12E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_2551 e6411256329af4e20206836f55af4cd5 271 SUPERFAMILY SSF46785 1 72 3.15E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2551 e6411256329af4e20206836f55af4cd5 271 Pfam PF00156 Phosphoribosyl transferase domain 114 256 3.4E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_2551 e6411256329af4e20206836f55af4cd5 271 Gene3D G3DSA:1.10.10.10 1 71 3.5E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2551 e6411256329af4e20206836f55af4cd5 271 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 7 71 2.0E-31 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 llmg_2463 52eee89e91122810e3ffca0367fb1a48 239 Pfam PF03483 B3/4 domain 73 200 4.5E-23 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 llmg_2463 52eee89e91122810e3ffca0367fb1a48 239 SUPERFAMILY SSF56037 60 229 2.04E-31 T 14-10-2018 llmg_2463 52eee89e91122810e3ffca0367fb1a48 239 SMART SM00873 68 217 3.3E-17 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 llmg_2463 52eee89e91122810e3ffca0367fb1a48 239 Gene3D G3DSA:3.50.40.10 73 204 1.2E-7 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 SUPERFAMILY SSF46955 2 110 1.36E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_0572 7094158c37f3046d611731dda4c0c3db 115 Pfam PF13411 MerR HTH family regulatory protein 2 64 5.9E-20 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 Gene3D G3DSA:1.10.1660.10 1 114 5.8E-32 T 14-10-2018 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.2E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.2E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.2E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0572 7094158c37f3046d611731dda4c0c3db 115 SMART SM00422 2 70 1.1E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_0178 f56ba858fb054e0a9830ba1c093a32af 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 403 1.0E-57 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_0178 f56ba858fb054e0a9830ba1c093a32af 446 PIRSF PIRSF006603 1 440 2.0E-88 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_0178 f56ba858fb054e0a9830ba1c093a32af 446 Pfam PF01554 MatE 19 179 4.9E-35 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_0178 f56ba858fb054e0a9830ba1c093a32af 446 Pfam PF01554 MatE 241 397 9.0E-18 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_0122 cd03f1a0a54fc0c4f72e3f25548c527e 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_0122 cd03f1a0a54fc0c4f72e3f25548c527e 253 SUPERFAMILY SSF53098 87 250 2.78E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0122 cd03f1a0a54fc0c4f72e3f25548c527e 253 Pfam PF00665 Integrase core domain 92 206 2.2E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0122 cd03f1a0a54fc0c4f72e3f25548c527e 253 Gene3D G3DSA:3.30.420.10 89 239 3.6E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_2174 cd03f1a0a54fc0c4f72e3f25548c527e 253 Pfam PF13276 HTH-like domain 15 63 3.3E-14 T 14-10-2018 IPR025948 HTH-like domain llmg_2174 cd03f1a0a54fc0c4f72e3f25548c527e 253 SUPERFAMILY SSF53098 87 250 2.78E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2174 cd03f1a0a54fc0c4f72e3f25548c527e 253 Pfam PF00665 Integrase core domain 92 206 2.2E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_2174 cd03f1a0a54fc0c4f72e3f25548c527e 253 Gene3D G3DSA:3.30.420.10 89 239 3.6E-17 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0933 4474d64ceb07356ba5514e0fce4bd115 79 Hamap MF_00088 UPF0109 protein . 5 78 17.653 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 llmg_0933 4474d64ceb07356ba5514e0fce4bd115 79 Pfam PF13083 KH domain 6 66 7.9E-18 T 14-10-2018 llmg_0933 4474d64ceb07356ba5514e0fce4bd115 79 SUPERFAMILY SSF54814 11 62 2.35E-6 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 llmg_0125 c54d2d92dc1e539318a9a0cd227d85d7 345 SUPERFAMILY SSF51569 3 340 1.88E-94 T 14-10-2018 llmg_0125 c54d2d92dc1e539318a9a0cd227d85d7 345 Gene3D G3DSA:3.20.20.70 11 345 6.0E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0125 c54d2d92dc1e539318a9a0cd227d85d7 345 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 23 340 1.7E-78 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 llmg_0125 c54d2d92dc1e539318a9a0cd227d85d7 345 PIRSF PIRSF001361 1 345 2.6E-114 T 14-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 llmg_0125 c54d2d92dc1e539318a9a0cd227d85d7 345 Pfam PF00793 DAHP synthetase I family 37 333 9.3E-53 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 llmg_0574 b5a72b347637d807ce72fa5eb4bbf1dc 147 Pfam PF00258 Flavodoxin 6 134 8.0E-24 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 llmg_0574 b5a72b347637d807ce72fa5eb4bbf1dc 147 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 llmg_0574 b5a72b347637d807ce72fa5eb4bbf1dc 147 SUPERFAMILY SSF52218 4 146 6.44E-41 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0574 b5a72b347637d807ce72fa5eb4bbf1dc 147 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 2.5E-46 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 llmg_0574 b5a72b347637d807ce72fa5eb4bbf1dc 147 Gene3D G3DSA:3.40.50.360 2 146 2.8E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_1578 d05c956dc10b999806ba9506b7ec95b8 248 Gene3D G3DSA:3.30.1380.10 26 247 3.0E-48 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 llmg_1578 d05c956dc10b999806ba9506b7ec95b8 248 SUPERFAMILY SSF55166 80 234 3.92E-26 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 llmg_1578 d05c956dc10b999806ba9506b7ec95b8 248 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 86 225 2.1E-37 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 llmg_0654 6585d4da1538b593a06ba46952d9deb9 206 Gene3D G3DSA:3.30.420.10 67 200 2.0E-15 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0654 6585d4da1538b593a06ba46952d9deb9 206 SUPERFAMILY SSF53098 63 194 6.32E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0654 6585d4da1538b593a06ba46952d9deb9 206 Pfam PF00665 Integrase core domain 71 184 1.8E-33 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 SUPERFAMILY SSF52540 3 228 4.4E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 1.7E-16 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 Pfam PF00005 ABC transporter 18 158 1.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 SMART SM00382 27 215 6.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1957 90fdd40b540fdce6e3b4b7fac4f4a498 310 Gene3D G3DSA:3.40.50.300 1 235 2.7E-55 T 14-10-2018 llmg_0418 759a7740000155e7f835f7c2cf464c12 108 Hamap MF_01159 Initiation-control protein YabA. 2 108 21.404 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 llmg_0418 759a7740000155e7f835f7c2cf464c12 108 PIRSF PIRSF021439 2 108 8.4E-35 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 llmg_0418 759a7740000155e7f835f7c2cf464c12 108 Pfam PF06156 Initiation control protein YabA 3 104 1.7E-26 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 Gene3D G3DSA:3.30.1370.30 2 74 1.1E-30 T 14-10-2018 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 Gene3D G3DSA:3.30.1490.10 75 132 5.9E-26 T 14-10-2018 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 SUPERFAMILY SSF56047 2 132 5.1E-47 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 Pfam PF00410 Ribosomal protein S8 5 132 1.5E-51 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2367 1e123e1cd2039318d5a82752075fc8c4 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 31.451 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0544 4b4a75d0981fa530c7d8beebaa25dc58 231 SUPERFAMILY SSF102645 1 227 1.15E-48 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 llmg_0544 4b4a75d0981fa530c7d8beebaa25dc58 231 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 116 193 1.2E-8 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 llmg_0544 4b4a75d0981fa530c7d8beebaa25dc58 231 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 2 97 2.7E-23 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 llmg_0544 4b4a75d0981fa530c7d8beebaa25dc58 231 Gene3D G3DSA:3.40.50.10300 1 229 2.5E-75 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 llmg_0544 4b4a75d0981fa530c7d8beebaa25dc58 231 TIGRFAM TIGR02114 coaB_strep: phosphopantothenate--cysteine ligase 1 223 4.1E-82 T 14-10-2018 IPR011848 Phosphopantothenate--cysteine ligase llmg_1786 591f29dea800aa9755b0d0323d307272 73 SUPERFAMILY SSF47336 3 72 2.88E-17 T 14-10-2018 IPR036736 ACP-like superfamily llmg_1786 591f29dea800aa9755b0d0323d307272 73 Gene3D G3DSA:1.10.1200.10 1 73 1.7E-18 T 14-10-2018 IPR036736 ACP-like superfamily llmg_1786 591f29dea800aa9755b0d0323d307272 73 Pfam PF00550 Phosphopantetheine attachment site 5 69 2.4E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain llmg_1786 591f29dea800aa9755b0d0323d307272 73 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 32 72 3.0E-15 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 llmg_1786 591f29dea800aa9755b0d0323d307272 73 Hamap MF_01217 Acyl carrier protein [acpP]. 2 73 17.902 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 Pfam PF00107 Zinc-binding dehydrogenase 177 274 2.1E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 SMART SM00829 10 343 0.0012 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 Gene3D G3DSA:3.40.50.720 157 307 1.4E-86 T 14-10-2018 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 120 1.0E-20 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 SUPERFAMILY SSF51735 145 312 1.04E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 Gene3D G3DSA:3.90.180.10 6 335 1.4E-86 T 14-10-2018 llmg_0955 29b3c331316d60edac3ec93b13e7b1b0 348 SUPERFAMILY SSF50129 1 176 2.67E-39 T 14-10-2018 IPR011032 GroES-like superfamily llmg_2525 0097b25002fd9114f698c374ea89f552 392 SUPERFAMILY SSF56349 70 383 6.18E-60 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_2525 0097b25002fd9114f698c374ea89f552 392 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 71 126 7.4E-10 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_2525 0097b25002fd9114f698c374ea89f552 392 Gene3D G3DSA:1.10.150.130 68 190 1.8E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_2525 0097b25002fd9114f698c374ea89f552 392 Pfam PF00589 Phage integrase family 191 375 1.0E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_2525 0097b25002fd9114f698c374ea89f552 392 Gene3D G3DSA:1.10.443.10 191 389 4.5E-46 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_0905 d0e1be2d5939fde698809b3a5e89211a 120 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 3.2E-65 T 14-10-2018 IPR012650 Conserved hypothetical protein CHP02328 llmg_0905 d0e1be2d5939fde698809b3a5e89211a 120 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 6.8E-38 T 14-10-2018 IPR004260 Pyrimidine dimer DNA glycosylase llmg_1240 f4572f404058056dbfe76f7ac80fc1c2 360 SUPERFAMILY SSF53697 9 345 1.36E-47 T 14-10-2018 llmg_1240 f4572f404058056dbfe76f7ac80fc1c2 360 Pfam PF01380 SIS domain 37 158 8.0E-8 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1240 f4572f404058056dbfe76f7ac80fc1c2 360 Gene3D G3DSA:3.40.50.10490 1 182 4.3E-30 T 14-10-2018 llmg_1240 f4572f404058056dbfe76f7ac80fc1c2 360 Gene3D G3DSA:3.40.50.10490 190 336 6.5E-47 T 14-10-2018 llmg_0489 267a54adb9b109b4d92695317ec87f0d 291 SUPERFAMILY SSF161098 46 276 2.09E-58 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0489 267a54adb9b109b4d92695317ec87f0d 291 Gene3D G3DSA:1.10.3720.10 42 284 3.1E-64 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0489 267a54adb9b109b4d92695317ec87f0d 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 279 5.9E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1079 80aea0c29f226dd9d7e242e474f0ad8e 115 SUPERFAMILY SSF159121 23 113 1.44E-26 T 14-10-2018 IPR036166 YxeA-like superfamily llmg_1079 80aea0c29f226dd9d7e242e474f0ad8e 115 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 112 2.3E-27 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 llmg_1079 80aea0c29f226dd9d7e242e474f0ad8e 115 Pfam PF06486 Protein of unknown function (DUF1093) 27 104 1.1E-22 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 llmg_1079 80aea0c29f226dd9d7e242e474f0ad8e 115 Gene3D G3DSA:2.40.50.480 25 115 1.2E-24 T 14-10-2018 IPR036166 YxeA-like superfamily llmg_2505 d40decb9c0d5a16e580694bbf6d58879 408 Gene3D G3DSA:3.30.470.20 114 381 3.4E-10 T 14-10-2018 llmg_2505 d40decb9c0d5a16e580694bbf6d58879 408 SUPERFAMILY SSF56059 121 320 4.07E-21 T 14-10-2018 llmg_0304 9c7becf41eefb5712ec6ede091ccc10c 76 Gene3D G3DSA:3.10.20.730 1 65 1.3E-18 T 14-10-2018 llmg_0304 9c7becf41eefb5712ec6ede091ccc10c 76 Hamap MF_01553 UPF0356 protein . 1 76 20.301 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 llmg_0304 9c7becf41eefb5712ec6ede091ccc10c 76 Pfam PF07288 Protein of unknown function (DUF1447) 2 74 7.9E-27 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 llmg_0304 9c7becf41eefb5712ec6ede091ccc10c 76 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 73 1.0E-35 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 SMART SM00382 51 184 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Gene3D G3DSA:1.10.10.10 257 333 8.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Gene3D G3DSA:1.10.8.60 182 255 4.3E-29 T 14-10-2018 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 162.137 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 SUPERFAMILY SSF46785 257 327 4.26E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Gene3D G3DSA:3.40.50.300 18 181 1.8E-40 T 14-10-2018 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 SUPERFAMILY SSF52540 20 250 1.84E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 1.3E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 326 4.0E-141 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 235 6.3E-114 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 llmg_2487 fbab1fb7c8ea1e868470d6d0fc5f2aaa 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 250 332 8.0E-42 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 SMART SM00382 47 249 8.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 Pfam PF00005 ABC transporter 39 193 5.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 SUPERFAMILY SSF52540 21 256 1.98E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 22 269 4.6E-117 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 llmg_1897 c8df36c20a302ebcf01b54e6e4058bc7 269 Gene3D G3DSA:3.40.50.300 18 265 4.8E-60 T 14-10-2018 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 SMART SM00316 4 72 2.3E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.6E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.479 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 9.7E-39 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 Gene3D G3DSA:2.40.50.140 1 72 6.2E-36 T 14-10-2018 llmg_2358 58cfef4a065c1b1186e7afaeeb943f63 72 SUPERFAMILY SSF50249 1 71 2.49E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 Pfam PF07670 Nucleoside recognition 501 626 5.1E-30 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 Pfam PF07670 Nucleoside recognition 340 434 5.5E-13 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 SUPERFAMILY SSF52540 4 159 1.05E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 624 2.2E-171 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 3.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 3.1E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 Gene3D G3DSA:3.40.50.300 2 181 1.9E-43 T 14-10-2018 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 Pfam PF07664 Ferrous iron transport protein B C terminus 444 496 8.4E-16 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 llmg_0199 09ec501ee7ce70a2e76e4ddb6b4d0b78 691 Pfam PF02421 Ferrous iron transport protein B 4 155 8.8E-66 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 llmg_0862 e7a4213990018c664cd9453095296bdb 472 Gene3D G3DSA:3.20.20.140 5 451 2.4E-180 T 14-10-2018 llmg_0862 e7a4213990018c664cd9453095296bdb 472 Pfam PF02614 Glucuronate isomerase 1 462 2.6E-209 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 llmg_0862 e7a4213990018c664cd9453095296bdb 472 SUPERFAMILY SSF51556 1 463 8.16E-168 T 14-10-2018 IPR032466 Metal-dependent hydrolase llmg_0862 e7a4213990018c664cd9453095296bdb 472 Hamap MF_00675 Uronate isomerase [uxaC]. 1 464 46.215 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 llmg_0862 e7a4213990018c664cd9453095296bdb 472 Gene3D G3DSA:1.10.2020.10 45 137 2.4E-180 T 14-10-2018 llmg_0016 d3fcb69219d2f1afd893bb1d82608891 124 Pfam PF04977 Septum formation initiator 34 112 1.5E-8 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC llmg_1973 9f2b95e284e84714a98c62485c9766ca 418 SUPERFAMILY SSF101960 6 416 3.66E-111 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily llmg_1973 9f2b95e284e84714a98c62485c9766ca 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 166 391 1.2E-55 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 llmg_1973 9f2b95e284e84714a98c62485c9766ca 418 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 131 407 1.2E-83 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 llmg_1140 2fcde900c3ef752c12a7fec1f2901b80 418 Gene3D G3DSA:3.30.420.40 5 349 4.1E-34 T 14-10-2018 llmg_1140 2fcde900c3ef752c12a7fec1f2901b80 418 Gene3D G3DSA:3.30.420.40 186 332 4.1E-34 T 14-10-2018 llmg_1140 2fcde900c3ef752c12a7fec1f2901b80 418 SUPERFAMILY SSF53067 189 346 2.24E-7 T 14-10-2018 llmg_2524 84029def67fa30bcc0c04a63a2036ce2 121 Gene3D G3DSA:2.30.30.40 48 121 4.6E-24 T 14-10-2018 llmg_2524 84029def67fa30bcc0c04a63a2036ce2 121 SUPERFAMILY SSF82057 48 121 1.51E-18 T 14-10-2018 llmg_2524 84029def67fa30bcc0c04a63a2036ce2 121 Pfam PF03831 PhnA domain 51 121 2.8E-25 T 14-10-2018 IPR013988 PhnA protein, C-terminal llmg_0055 7779a599fb1cb479ae45824478d93467 394 Gene3D G3DSA:1.10.150.130 66 189 2.3E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_0055 7779a599fb1cb479ae45824478d93467 394 Pfam PF00589 Phage integrase family 189 376 4.5E-28 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0055 7779a599fb1cb479ae45824478d93467 394 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 69 125 5.8E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_0055 7779a599fb1cb479ae45824478d93467 394 Gene3D G3DSA:1.10.443.10 190 393 4.7E-50 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_0055 7779a599fb1cb479ae45824478d93467 394 SUPERFAMILY SSF56349 69 385 1.39E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_0407 5a617ff8683bf3744830466ef27e63b2 208 Gene3D G3DSA:3.30.1940.10 17 92 7.6E-65 T 14-10-2018 IPR037154 YtpR-like superfamily llmg_0407 5a617ff8683bf3744830466ef27e63b2 208 Pfam PF14794 Domain of unknown function (DUF4479) 22 91 2.8E-24 T 14-10-2018 IPR027855 Domain of unknown function DUF4479 llmg_0407 5a617ff8683bf3744830466ef27e63b2 208 SUPERFAMILY SSF50249 93 199 9.79E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0407 5a617ff8683bf3744830466ef27e63b2 208 Gene3D G3DSA:2.40.50.140 7 200 7.6E-65 T 14-10-2018 llmg_0407 5a617ff8683bf3744830466ef27e63b2 208 Pfam PF01588 Putative tRNA binding domain 96 198 1.5E-20 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 Pfam PF01047 MarR family 46 96 3.3E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 SUPERFAMILY SSF46785 9 147 1.55E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 SMART SM00347 33 132 1.5E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 Gene3D G3DSA:1.10.10.10 13 211 3.0E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1860 e981a397d47cdfd0ab28e450c4b3506d 295 SMART SM00529 57 160 0.0038 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 llmg_0593 87796a90abc058fecd12fc189e96c7c4 300 SUPERFAMILY SSF117892 57 190 1.83E-25 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily llmg_0593 87796a90abc058fecd12fc189e96c7c4 300 Pfam PF01145 SPFH domain / Band 7 family 28 198 5.1E-28 T 14-10-2018 IPR001107 Band 7 domain llmg_0593 87796a90abc058fecd12fc189e96c7c4 300 SMART SM00244 24 184 1.7E-26 T 14-10-2018 IPR001107 Band 7 domain llmg_0593 87796a90abc058fecd12fc189e96c7c4 300 Gene3D G3DSA:3.30.479.30 59 186 3.3E-15 T 14-10-2018 llmg_2507 4b012c0b133a7c0b36845e9793b7b7a2 461 Pfam PF05257 CHAP domain 349 437 3.9E-9 T 14-10-2018 IPR007921 CHAP domain llmg_2507 4b012c0b133a7c0b36845e9793b7b7a2 461 Gene3D G3DSA:3.90.1720.10 342 459 1.0E-17 T 14-10-2018 llmg_2507 4b012c0b133a7c0b36845e9793b7b7a2 461 Gene3D G3DSA:1.20.5.340 17 116 3.8E-5 T 14-10-2018 llmg_2507 4b012c0b133a7c0b36845e9793b7b7a2 461 SUPERFAMILY SSF54001 339 451 7.06E-8 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_0831 c8cea1a3fc0722bb90699ffca6b81e2e 365 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 211 317 7.5E-20 T 14-10-2018 IPR006528 Phage head morphogenesis domain llmg_0831 c8cea1a3fc0722bb90699ffca6b81e2e 365 Pfam PF04233 Phage Mu protein F like protein 220 316 4.6E-9 T 14-10-2018 IPR006528 Phage head morphogenesis domain llmg_0111 79e3699843c4199daabe506b21318135 250 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 249 1.1E-50 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 llmg_0111 79e3699843c4199daabe506b21318135 250 Pfam PF04452 RNA methyltransferase 21 244 3.2E-67 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 llmg_0111 79e3699843c4199daabe506b21318135 250 SUPERFAMILY SSF88697 4 65 5.96E-10 T 14-10-2018 IPR015947 PUA-like superfamily llmg_0111 79e3699843c4199daabe506b21318135 250 SUPERFAMILY SSF75217 74 249 1.83E-50 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_0111 79e3699843c4199daabe506b21318135 250 PIRSF PIRSF015601 1 249 3.5E-53 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 llmg_0111 79e3699843c4199daabe506b21318135 250 Gene3D G3DSA:3.40.1280.10 2 250 1.1E-70 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_1933 5fb02d7a1bbbfa01483992519ad303bf 118 Gene3D G3DSA:2.40.50.480 25 117 3.9E-30 T 14-10-2018 IPR036166 YxeA-like superfamily llmg_1933 5fb02d7a1bbbfa01483992519ad303bf 118 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 113 1.1E-29 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 llmg_1933 5fb02d7a1bbbfa01483992519ad303bf 118 SUPERFAMILY SSF159121 21 115 6.41E-29 T 14-10-2018 IPR036166 YxeA-like superfamily llmg_1933 5fb02d7a1bbbfa01483992519ad303bf 118 Pfam PF06486 Protein of unknown function (DUF1093) 26 103 3.2E-26 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 Pfam PF01467 Cytidylyltransferase-like 7 138 6.7E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 160 3.5E-48 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 163 29.133 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 Gene3D G3DSA:3.40.50.620 1 166 2.3E-48 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2443 2f0f14d76d496432953e343b79d7863e 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 1.6E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 91 107 1.6E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 1.6E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 1.6E-24 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 SUPERFAMILY SSF52374 4 160 7.51E-39 T 14-10-2018 llmg_2443 2f0f14d76d496432953e343b79d7863e 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 62 3.7E-20 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_0320 3b2140654071270b47999ca5adf90447 396 SUPERFAMILY SSF103473 6 389 1.19E-60 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0320 3b2140654071270b47999ca5adf90447 396 Gene3D G3DSA:1.20.1250.20 4 394 1.9E-65 T 14-10-2018 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 104 125 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 162 182 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 343 366 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 46 65 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 17 33 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 251 271 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 134 156 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 PRINTS PR01035 Tetracycline resistance protein signature 77 101 6.0E-49 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 llmg_0320 3b2140654071270b47999ca5adf90447 396 Pfam PF07690 Major Facilitator Superfamily 12 226 1.3E-32 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 Gene3D G3DSA:3.10.290.10 3 66 2.4E-16 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 Pfam PF01479 S4 domain 14 58 3.2E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 SUPERFAMILY SSF55174 13 66 2.69E-11 T 14-10-2018 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 131 145 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 298 1.2E-97 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 SMART SM00363 13 76 9.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 Pfam PF00849 RNA pseudouridylate synthase 86 238 8.1E-35 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 Gene3D G3DSA:3.30.2350.10 78 301 6.3E-76 T 14-10-2018 llmg_1524 06f1fb423aba3a754c9b451e89997b95 301 SUPERFAMILY SSF55120 70 298 4.73E-78 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 llmg_2537 c1f4c7a826a598af9a06aebba61d366b 136 Pfam PF05263 Protein of unknown function (DUF722) 2 134 2.4E-53 T 14-10-2018 IPR007927 Protein of unknown function DUF722 llmg_1420 c051b86c52b55769f7ff49b50cfe61e9 439 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 27 87 8.0E-5 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 llmg_1420 c051b86c52b55769f7ff49b50cfe61e9 439 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 161 239 8.5E-5 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 llmg_1420 c051b86c52b55769f7ff49b50cfe61e9 439 Pfam PF11922 Domain of unknown function (DUF3440) 242 426 1.2E-75 T 14-10-2018 IPR021845 Protein of unknown function DUF3440 llmg_1420 c051b86c52b55769f7ff49b50cfe61e9 439 SUPERFAMILY SSF52402 4 236 1.72E-31 T 14-10-2018 llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 Gene3D G3DSA:3.40.50.1000 13 155 1.8E-24 T 14-10-2018 IPR023214 HAD superfamily llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 1.5E-18 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 Pfam PF13419 Haloacid dehalogenase-like hydrolase 49 137 3.6E-13 T 14-10-2018 llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 7 166 8.0E-40 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 SUPERFAMILY SSF56784 7 151 5.25E-28 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2500 ca169d7f4d0ccded0a36bbe8dfb6ed4e 175 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 131 1.4E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0482 d29e841fadf603f710859b06169768e5 394 Gene3D G3DSA:3.90.70.10 210 394 4.8E-37 T 14-10-2018 llmg_0482 d29e841fadf603f710859b06169768e5 394 Pfam PF13529 Peptidase_C39 like family 217 368 8.9E-27 T 14-10-2018 IPR039564 Peptidase C39-like llmg_1493 aef29508ba59a14dc782034cc5b115e4 104 Pfam PF00829 Ribosomal prokaryotic L21 protein 4 102 4.4E-37 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1493 aef29508ba59a14dc782034cc5b115e4 104 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 3 104 25.364 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1493 aef29508ba59a14dc782034cc5b115e4 104 TIGRFAM TIGR00061 L21: ribosomal protein bL21 4 102 2.2E-37 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1493 aef29508ba59a14dc782034cc5b115e4 104 SUPERFAMILY SSF141091 4 102 1.18E-36 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0820 808f975f65bd2c40a70f59902f4c2ea3 57 Pfam PF07874 Prophage protein (DUF1660) 1 56 1.5E-14 T 14-10-2018 IPR012455 Protein of unknown function DUF1660 llmg_1011 ef945a201f1cf6d9383082c18323c29e 398 Gene3D G3DSA:3.40.190.10 183 355 3.1E-65 T 14-10-2018 llmg_1011 ef945a201f1cf6d9383082c18323c29e 398 Pfam PF13416 Bacterial extracellular solute-binding protein 83 392 1.4E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein llmg_1011 ef945a201f1cf6d9383082c18323c29e 398 Gene3D G3DSA:3.40.190.10 83 397 3.1E-65 T 14-10-2018 llmg_1011 ef945a201f1cf6d9383082c18323c29e 398 SUPERFAMILY SSF53850 22 396 3.07E-66 T 14-10-2018 llmg_1972 ddb63da447898ee3dd785818d683b687 405 PIRSF PIRSF005572 19 403 2.7E-51 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 llmg_1972 ddb63da447898ee3dd785818d683b687 405 Gene3D G3DSA:3.40.640.10 33 291 2.6E-179 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_1972 ddb63da447898ee3dd785818d683b687 405 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 4 403 3.7E-186 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 llmg_1972 ddb63da447898ee3dd785818d683b687 405 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 212 231 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site llmg_1972 ddb63da447898ee3dd785818d683b687 405 SUPERFAMILY SSF53383 6 399 1.75E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1972 ddb63da447898ee3dd785818d683b687 405 Gene3D G3DSA:3.90.1150.10 5 395 2.6E-179 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_1972 ddb63da447898ee3dd785818d683b687 405 Pfam PF00266 Aminotransferase class-V 22 391 2.6E-156 T 14-10-2018 IPR000192 Aminotransferase class V domain llmg_1177 d2ab929d564335f3cbe55bdff230ffea 276 SMART SM00530 8 62 4.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1177 d2ab929d564335f3cbe55bdff230ffea 276 SUPERFAMILY SSF47413 4 63 8.45E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1177 d2ab929d564335f3cbe55bdff230ffea 276 Gene3D G3DSA:1.10.260.40 5 136 6.8E-6 T 14-10-2018 llmg_1177 d2ab929d564335f3cbe55bdff230ffea 276 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 64 273 9.3E-58 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_0551 777beadf1571047f52d54ecb32d0f064 198 Pfam PF17294 Uncharacterised lipoprotein family 32 185 6.8E-32 T 14-10-2018 IPR035253 Putative lipoprotein, bacteria llmg_1494 3435decf76424a09adb0cb02a7079a19 391 Pfam PF06197 Protein of unknown function (DUF998) 193 364 4.3E-11 T 14-10-2018 IPR009339 Protein of unknown function DUF998 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 91 106 8.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 48 56 8.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 8.1E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 Pfam PF01252 Signal peptidase (SPase) II 9 144 4.4E-36 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 TIGRFAM TIGR00077 lspA: signal peptidase II 4 148 2.6E-35 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.057 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_1525 acd2aacd798eabe831778f944e85d4da 150 ProSitePatterns PS00855 Signal peptidases II signature. 94 106 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 llmg_0167 08e5e3d25e42012480257c01967ecd96 145 Gene3D G3DSA:3.40.50.720 3 141 7.2E-34 T 14-10-2018 llmg_0167 08e5e3d25e42012480257c01967ecd96 145 Pfam PF13380 CoA binding domain 20 137 8.3E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 llmg_0167 08e5e3d25e42012480257c01967ecd96 145 SUPERFAMILY SSF51735 12 141 3.69E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0167 08e5e3d25e42012480257c01967ecd96 145 SMART SM00881 16 110 3.8E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 llmg_1901 01e06abc9ae1625669f9e1f518df62eb 298 Gene3D G3DSA:3.40.190.10 47 282 1.1E-76 T 14-10-2018 llmg_1901 01e06abc9ae1625669f9e1f518df62eb 298 SUPERFAMILY SSF53850 43 289 1.75E-64 T 14-10-2018 llmg_1901 01e06abc9ae1625669f9e1f518df62eb 298 Gene3D G3DSA:3.40.190.10 117 240 1.1E-76 T 14-10-2018 llmg_1901 01e06abc9ae1625669f9e1f518df62eb 298 Pfam PF12849 PBP superfamily domain 32 268 3.7E-32 T 14-10-2018 IPR024370 PBP domain llmg_1901 01e06abc9ae1625669f9e1f518df62eb 298 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 282 3.0E-75 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 llmg_1186 26e3d46322a4c11aea86de1d1674173b 79 Hamap MF_00363 UPF0154 protein . 2 72 20.865 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 llmg_1186 26e3d46322a4c11aea86de1d1674173b 79 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 62 4.0E-30 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 llmg_1186 26e3d46322a4c11aea86de1d1674173b 79 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 68 7.6E-23 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 llmg_1265 4ddad435dbb23f94c1bdcbee77866434 204 Gene3D G3DSA:3.30.420.10 112 203 4.2E-14 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1265 4ddad435dbb23f94c1bdcbee77866434 204 Pfam PF13276 HTH-like domain 46 96 2.2E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_1265 4ddad435dbb23f94c1bdcbee77866434 204 Pfam PF00665 Integrase core domain 118 202 2.9E-20 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1265 4ddad435dbb23f94c1bdcbee77866434 204 SUPERFAMILY SSF53098 115 202 2.66E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1653 45fd44cc5de64f7641d14bae501a88a5 483 Gene3D G3DSA:3.90.1720.10 380 482 1.0E-22 T 14-10-2018 llmg_1653 45fd44cc5de64f7641d14bae501a88a5 483 SUPERFAMILY SSF54001 356 480 2.35E-12 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_1653 45fd44cc5de64f7641d14bae501a88a5 483 Pfam PF05257 CHAP domain 378 455 4.2E-10 T 14-10-2018 IPR007921 CHAP domain llmg_1143 0b3d44544f4bce2d525ead8077186782 171 SMART SM00530 9 63 1.1E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1143 0b3d44544f4bce2d525ead8077186782 171 Pfam PF01381 Helix-turn-helix 11 62 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1143 0b3d44544f4bce2d525ead8077186782 171 SUPERFAMILY SSF47413 4 64 1.47E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1143 0b3d44544f4bce2d525ead8077186782 171 Gene3D G3DSA:1.10.260.40 2 108 9.5E-8 T 14-10-2018 llmg_1143 0b3d44544f4bce2d525ead8077186782 171 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 65 159 3.5E-14 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_1356 76e0c95cbeeabc4a20e1c021c95e579a 368 Pfam PF15608 PELOTA RNA binding domain 283 362 1.3E-25 T 14-10-2018 IPR028157 PELOTA RNA-binding domain llmg_1356 76e0c95cbeeabc4a20e1c021c95e579a 368 Pfam PF11202 Phosphoribosyl transferase (PRTase) 15 266 4.0E-100 T 14-10-2018 IPR011215 Phosphoribosyl transferase llmg_0231 464484d7b60b0337a236fd037ba888b4 381 SUPERFAMILY SSF52540 82 298 2.37E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0231 464484d7b60b0337a236fd037ba888b4 381 Gene3D G3DSA:3.40.50.300 77 244 6.1E-47 T 14-10-2018 llmg_0231 464484d7b60b0337a236fd037ba888b4 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 203 5.7E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0231 464484d7b60b0337a236fd037ba888b4 381 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 234 249 5.7E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_0231 464484d7b60b0337a236fd037ba888b4 381 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 3 380 4.4E-142 T 14-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH llmg_0231 464484d7b60b0337a236fd037ba888b4 381 Pfam PF01926 50S ribosome-binding GTPase 183 244 3.3E-14 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 llmg_1857 b797cb9b6b1857c549255fff4c32dd8f 112 SUPERFAMILY SSF52266 2 111 7.16E-21 T 14-10-2018 llmg_1857 b797cb9b6b1857c549255fff4c32dd8f 112 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 3 100 4.6E-11 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain llmg_1857 b797cb9b6b1857c549255fff4c32dd8f 112 Gene3D G3DSA:3.40.50.1110 1 110 1.0E-22 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_2306 955fdd1a44e8345adbe774cd1a61b837 163 SUPERFAMILY SSF55826 1 163 1.1E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_2306 955fdd1a44e8345adbe774cd1a61b837 163 Pfam PF04073 Aminoacyl-tRNA editing domain 23 145 2.9E-17 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 llmg_2306 955fdd1a44e8345adbe774cd1a61b837 163 Gene3D G3DSA:3.90.960.10 1 163 9.5E-36 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 llmg_1109 c6ac7193d242530a6a34005878889fe9 238 PIRSF PIRSF003078 2 220 4.1E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 llmg_1109 c6ac7193d242530a6a34005878889fe9 238 Gene3D G3DSA:3.40.50.150 2 238 1.0E-80 T 14-10-2018 llmg_1109 c6ac7193d242530a6a34005878889fe9 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.75 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 llmg_1109 c6ac7193d242530a6a34005878889fe9 238 SUPERFAMILY SSF53335 1 237 3.53E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1109 c6ac7193d242530a6a34005878889fe9 238 Pfam PF02527 rRNA small subunit methyltransferase G 21 195 6.6E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 llmg_1109 c6ac7193d242530a6a34005878889fe9 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 217 9.1E-50 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 llmg_0860 ee61845b40a736cd39192e0e5cfa2ee9 508 Gene3D G3DSA:1.20.1250.20 18 211 1.0E-9 T 14-10-2018 llmg_0860 ee61845b40a736cd39192e0e5cfa2ee9 508 Gene3D G3DSA:1.20.1250.20 243 458 4.2E-6 T 14-10-2018 llmg_0860 ee61845b40a736cd39192e0e5cfa2ee9 508 SUPERFAMILY SSF103473 22 457 1.31E-28 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0860 ee61845b40a736cd39192e0e5cfa2ee9 508 Pfam PF13347 MFS/sugar transport protein 24 460 1.1E-35 T 14-10-2018 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 SUPERFAMILY SSF52279 375 591 3.79E-42 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 375 591 8.3E-40 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Gene3D G3DSA:3.20.20.300 1 359 8.9E-111 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Gene3D G3DSA:3.40.50.1700 361 592 8.5E-61 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Pfam PF14310 Fibronectin type III-like domain 630 694 3.5E-11 T 14-10-2018 IPR026891 Fibronectin type III-like domain llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 15 309 1.7E-64 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 SUPERFAMILY SSF51445 7 373 1.68E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 Gene3D G3DSA:2.60.40.10 595 709 1.7E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 SMART SM01217 628 697 1.4E-10 T 14-10-2018 IPR026891 Fibronectin type III-like domain llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 PRINTS PR00133 Glycosyl hydrolase family 3 signature 257 275 9.1E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 PRINTS PR00133 Glycosyl hydrolase family 3 signature 102 121 9.1E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 PRINTS PR00133 Glycosyl hydrolase family 3 signature 187 203 9.1E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 164 9.1E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_1456 57a7e0e0772c5e58ab1f8e3a42014858 714 PRINTS PR00133 Glycosyl hydrolase family 3 signature 83 99 9.1E-25 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 llmg_0290 fcb28f44de028df36a36e978374a40f1 203 SUPERFAMILY SSF54593 2 88 1.61E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0290 fcb28f44de028df36a36e978374a40f1 203 SUPERFAMILY SSF52833 104 190 5.14E-10 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0290 fcb28f44de028df36a36e978374a40f1 203 Gene3D G3DSA:3.40.30.10 99 202 2.7E-11 T 14-10-2018 llmg_0193 c7d7b9b2dfbcf794a222c2824c8c75a1 255 Pfam PF06265 Protein of unknown function (DUF1027) 29 112 1.1E-36 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 llmg_0193 c7d7b9b2dfbcf794a222c2824c8c75a1 255 PIRSF PIRSF012565 1 230 1.8E-73 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 llmg_0193 c7d7b9b2dfbcf794a222c2824c8c75a1 255 PIRSF PIRSF012565 169 254 0.71 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 llmg_0193 c7d7b9b2dfbcf794a222c2824c8c75a1 255 Gene3D G3DSA:3.50.4.20 17 122 7.8E-42 T 14-10-2018 IPR038141 YutD-like superfamily llmg_1852 a5aed3172db4372ba2b630f7185b8fa8 72 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 9 70 1.7E-31 T 14-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 535 546 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 426 438 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 465 481 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 444 456 1.0E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 Pfam PF05649 Peptidase family M13 5 381 8.2E-63 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 Pfam PF01431 Peptidase family M13 434 624 1.2E-70 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 Gene3D G3DSA:1.10.1380.10 30 352 9.8E-87 T 14-10-2018 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 Gene3D G3DSA:3.40.390.10 389 627 2.5E-79 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 llmg_1985 97e7b4ee64c1d1767fc884d987eb5143 627 SUPERFAMILY SSF55486 5 627 1.76E-172 T 14-10-2018 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 2 180 37.092 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 SUPERFAMILY SSF53178 2 188 1.19E-66 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 15 28 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 Gene3D G3DSA:3.40.50.1470 1 188 1.1E-69 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 Pfam PF01195 Peptidyl-tRNA hydrolase 4 188 3.3E-57 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 llmg_0012 94a86b93c42a4986453b98f89e45f05d 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 188 4.0E-64 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 llmg_1812 b0a433dd15ed51ad4e0d6f308e7c33ef 257 Gene3D G3DSA:3.90.1200.10 71 245 1.4E-11 T 14-10-2018 llmg_1812 b0a433dd15ed51ad4e0d6f308e7c33ef 257 SUPERFAMILY SSF56112 12 217 2.2E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily llmg_1812 b0a433dd15ed51ad4e0d6f308e7c33ef 257 Pfam PF01636 Phosphotransferase enzyme family 46 198 1.2E-14 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 Gene3D G3DSA:3.40.1190.20 1 298 6.3E-86 T 14-10-2018 IPR029056 Ribokinase-like llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 Pfam PF00294 pfkB family carbohydrate kinase 1 283 3.4E-61 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 PRINTS PR00990 Ribokinase signature 33 52 4.7E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 PRINTS PR00990 Ribokinase signature 104 117 4.7E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 PRINTS PR00990 Ribokinase signature 172 187 4.7E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 PRINTS PR00990 Ribokinase signature 207 218 4.7E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 PRINTS PR00990 Ribokinase signature 6 27 4.7E-35 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 Hamap MF_01987 Ribokinase [rbsK]. 2 291 24.427 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 289 8.2E-103 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 llmg_0785 9760d4454deaae1ce27e9532d7b547fe 306 SUPERFAMILY SSF53613 1 292 1.71E-73 T 14-10-2018 IPR029056 Ribokinase-like llmg_2152 1a411f2d2a7b981d562fa6903e9cc03d 113 Pfam PF06224 Winged helix DNA-binding domain 35 99 3.3E-6 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 Gene3D G3DSA:2.70.150.20 108 224 2.5E-32 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 95 582 1.7E-79 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 SUPERFAMILY SSF56784 311 611 6.08E-46 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0690 bd948df58431b6261a04706f1a698f1f 620 SUPERFAMILY SSF81653 135 220 3.92E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 314 320 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 ProSitePatterns PS01229 Hypothetical cof family signature 2. 505 527 - T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 Pfam PF00122 E1-E2 ATPase 135 292 1.5E-45 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 73 614 3.7E-162 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 505 521 3.3E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 536 561 3.3E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 477 493 3.3E-7 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 60 614 9.0E-126 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 Pfam PF00702 haloacid dehalogenase-like hydrolase 308 519 1.9E-36 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 505 524 4.5E-21 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 540 4.5E-21 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 170 184 4.5E-21 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 452 462 4.5E-21 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 4.5E-21 T 14-10-2018 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 Gene3D G3DSA:3.40.1110.10 323 436 3.9E-82 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 SUPERFAMILY SSF81665 77 583 1.83E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 llmg_0690 bd948df58431b6261a04706f1a698f1f 620 Gene3D G3DSA:3.40.50.1000 293 557 3.9E-82 T 14-10-2018 IPR023214 HAD superfamily llmg_1112 6d549e1f8c3ba962904937a0f92d09ea 135 Gene3D G3DSA:2.60.320.10 40 134 5.0E-29 T 14-10-2018 IPR038690 NusG, domain 2 superfamily llmg_1112 6d549e1f8c3ba962904937a0f92d09ea 135 Pfam PF07009 NusG domain II 23 124 1.6E-30 T 14-10-2018 IPR024045 NusG, domain 2 llmg_1554 b84497bd28a6bcce2b6d3e6dc596a1d9 216 SUPERFAMILY SSF46689 35 105 7.7E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1554 b84497bd28a6bcce2b6d3e6dc596a1d9 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 87 2.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_1554 b84497bd28a6bcce2b6d3e6dc596a1d9 216 Gene3D G3DSA:1.10.357.10 32 215 1.6E-22 T 14-10-2018 llmg_0218 d746941722baf1ead1c04f84668dc431 245 SUPERFAMILY SSF53448 4 226 3.62E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0218 d746941722baf1ead1c04f84668dc431 245 Pfam PF00535 Glycosyl transferase family 2 12 176 3.9E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0218 d746941722baf1ead1c04f84668dc431 245 Gene3D G3DSA:3.90.550.10 2 243 2.5E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0590 4b5ae1cb9e94e2a7eeecd03030830988 221 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 198 5.1E-33 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_0334 e5d962548c93b028438e919888782a32 182 Gene3D G3DSA:1.10.1760.20 7 182 2.2E-54 T 14-10-2018 llmg_0334 e5d962548c93b028438e919888782a32 182 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 179 4.5E-64 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 llmg_0334 e5d962548c93b028438e919888782a32 182 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 11 177 3.1E-50 T 14-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 Gene3D G3DSA:3.40.190.290 93 293 8.7E-10 T 14-10-2018 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 SUPERFAMILY SSF46785 1 83 7.58E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 Pfam PF03466 LysR substrate binding domain 99 221 4.9E-8 T 14-10-2018 IPR005119 LysR, substrate-binding llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.4E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 SUPERFAMILY SSF53850 85 286 4.34E-13 T 14-10-2018 llmg_0350 83bc541042e1595bc80635f5eb5b194e 301 Gene3D G3DSA:1.10.10.10 1 92 2.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1444 918dafcd66a971cfd932182fb3be73f1 155 Gene3D G3DSA:3.90.79.10 4 155 6.5E-35 T 14-10-2018 llmg_1444 918dafcd66a971cfd932182fb3be73f1 155 SUPERFAMILY SSF55811 14 139 1.9E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_1444 918dafcd66a971cfd932182fb3be73f1 155 Pfam PF00293 NUDIX domain 15 123 5.1E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 SUPERFAMILY SSF52540 509 679 2.92E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 Gene3D G3DSA:1.10.8.630 2 118 2.8E-19 T 14-10-2018 llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 SUPERFAMILY SSF52540 212 426 9.76E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 Pfam PF00271 Helicase conserved C-terminal domain 556 639 2.0E-10 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 SMART SM00487 245 441 1.5E-22 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 Gene3D G3DSA:3.40.50.300 236 427 3.4E-72 T 14-10-2018 llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 Pfam PF04851 Type III restriction enzyme, res subunit 248 407 9.5E-15 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 SMART SM00490 543 640 4.7E-12 T 14-10-2018 IPR001650 Helicase, C-terminal llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 780 24.576 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 llmg_2153 c426d96b72c45bd7d3235feac9fc9afc 781 TIGRFAM TIGR00595 priA: primosomal protein N' 269 777 6.4E-208 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 229 9.0E-104 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 PIRSF PIRSF000709 2 109 5.2E-7 T 14-10-2018 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 PIRSF PIRSF000709 172 209 49.0 T 14-10-2018 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 Gene3D G3DSA:3.40.50.1240 1 231 2.7E-78 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 SMART SM00855 3 189 7.2E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 128 219 1.2E-4 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 123 8.1E-27 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 42.624 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 llmg_0355 0377885847e5d6c9a82f152d0f21a924 233 SUPERFAMILY SSF53254 1 221 4.32E-70 T 14-10-2018 IPR029033 Histidine phosphatase superfamily llmg_0270 23084ec49a5ce9f377780df9a9f03e97 221 Pfam PF05128 Domain of unknown function (DUF697) 78 195 1.4E-8 T 14-10-2018 IPR021147 Protein of unknown function DUF697 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 PIRSF PIRSF006092 1 156 3.4E-49 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 Gene3D G3DSA:3.10.50.30 77 156 5.8E-25 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 SUPERFAMILY SSF54534 82 155 3.53E-19 T 14-10-2018 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 Gene3D G3DSA:1.10.287.180 2 76 6.7E-31 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 155 5.7E-25 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 1.9E-30 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 6 155 1.3E-55 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 32.732 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 llmg_0610 44d547b9aaec6ff8f376d2272b8a2129 156 SUPERFAMILY SSF46557 3 77 3.66E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 llmg_1005 6feda23b75059a732dc6370aca394c8c 289 Gene3D G3DSA:3.30.420.40 1 102 2.7E-23 T 14-10-2018 llmg_1005 6feda23b75059a732dc6370aca394c8c 289 SUPERFAMILY SSF53067 1 286 1.68E-59 T 14-10-2018 llmg_1005 6feda23b75059a732dc6370aca394c8c 289 Pfam PF00480 ROK family 5 281 6.1E-50 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 llmg_1005 6feda23b75059a732dc6370aca394c8c 289 Gene3D G3DSA:3.30.420.40 103 287 1.8E-45 T 14-10-2018 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 Gene3D G3DSA:3.30.1240.10 81 193 5.2E-60 T 14-10-2018 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 14-10-2018 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 1.2E-59 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 Gene3D G3DSA:3.40.50.1000 4 264 5.2E-60 T 14-10-2018 IPR023214 HAD superfamily llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.9E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 2.4E-56 T 14-10-2018 llmg_1245 7273e49eb8fc03ab746f38ebdd82f5e9 270 SUPERFAMILY SSF56784 3 265 2.76E-56 T 14-10-2018 IPR036412 HAD-like superfamily llmg_2297 858ec180e53c41aa2950e0f1226f54d1 242 Pfam PF04397 LytTr DNA-binding domain 143 234 1.2E-9 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 llmg_2297 858ec180e53c41aa2950e0f1226f54d1 242 SMART SM00850 140 236 8.0E-4 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 llmg_1302 6f6a579042a8392e44e2a8be2385aa4a 133 Pfam PF09945 Predicted membrane protein (DUF2177) 4 124 1.3E-41 T 14-10-2018 IPR018687 Protein of unknown function DUF2177, membrane llmg_0084 40f7852db24e90b82c9a615069d48422 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 236 3.3E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0084 40f7852db24e90b82c9a615069d48422 270 Gene3D G3DSA:3.30.1240.10 85 193 6.8E-64 T 14-10-2018 llmg_0084 40f7852db24e90b82c9a615069d48422 270 SUPERFAMILY SSF56784 2 267 2.85E-60 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0084 40f7852db24e90b82c9a615069d48422 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 260 3.8E-46 T 14-10-2018 IPR000150 Cof family GO:0016787 llmg_0084 40f7852db24e90b82c9a615069d48422 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 262 1.3E-56 T 14-10-2018 llmg_0084 40f7852db24e90b82c9a615069d48422 270 Gene3D G3DSA:3.40.50.1000 9 260 6.8E-64 T 14-10-2018 IPR023214 HAD superfamily llmg_1917 bd58b62f80d52250055233f16d60df64 227 SUPERFAMILY SSF100950 44 224 3.47E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_1917 bd58b62f80d52250055233f16d60df64 227 Gene3D G3DSA:3.40.50.10420 32 224 1.3E-30 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily llmg_1917 bd58b62f80d52250055233f16d60df64 227 Pfam PF02589 LUD domain 55 224 3.0E-21 T 14-10-2018 IPR003741 LUD domain llmg_0991 de1313a3295cc9c8c9185c83b8f849f4 176 SUPERFAMILY SSF46689 36 83 8.48E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0991 de1313a3295cc9c8c9185c83b8f849f4 176 Gene3D G3DSA:1.10.357.10 7 176 4.5E-17 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 307 1.5E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 333 432 1.1E-9 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 SUPERFAMILY SSF51905 1 316 4.05E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.2E-11 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 2.2E-11 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 2.2E-11 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 Gene3D G3DSA:3.50.50.60 112 442 3.7E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 SUPERFAMILY SSF55424 323 445 5.67E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 3.0E-20 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 3.0E-20 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 3.0E-20 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 3.0E-20 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 3.0E-20 T 14-10-2018 llmg_0408 45d4d5ec612889645ddab0e4886ead7f 446 Gene3D G3DSA:3.50.50.60 2 340 3.7E-130 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 SUPERFAMILY SSF53681 5 107 1.99E-36 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 Gene3D G3DSA:3.40.50.1860 95 206 1.5E-93 T 14-10-2018 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 213 1.6E-38 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 252 9.6E-78 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 Gene3D G3DSA:3.40.50.1860 5 251 1.5E-93 T 14-10-2018 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 Hamap MF_00258 Glutamate racemase [murI]. 4 255 40.554 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1187 8395bdeb9db7d87d6e5b7ed20abf4300 271 SUPERFAMILY SSF53681 109 261 3.92E-39 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 272 4.3E-82 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Gene3D G3DSA:3.40.50.300 8 274 2.5E-105 T 14-10-2018 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 756 2.4E-301 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Gene3D G3DSA:3.40.50.300 280 644 3.0E-118 T 14-10-2018 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 SUPERFAMILY SSF52540 2 653 2.54E-169 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Gene3D G3DSA:1.10.486.10 382 559 3.0E-118 T 14-10-2018 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Pfam PF13361 UvrD-like helicase C-terminal domain 278 626 5.7E-74 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 llmg_1445 9205d5ff45caf42451814287e5c78b40 758 Gene3D G3DSA:1.10.10.160 111 187 2.5E-105 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 Gene3D G3DSA:3.40.50.10490 1 219 3.3E-74 T 14-10-2018 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 SUPERFAMILY SSF53697 7 249 5.12E-71 T 14-10-2018 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 296 41.367 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 Gene3D G3DSA:1.10.8.1080 220 297 2.1E-28 T 14-10-2018 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 7 296 1.1E-115 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 186 203 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 llmg_1427 eedcb8cd7590f17cd21d732ada8d669c 297 Pfam PF13580 SIS domain 41 161 1.2E-6 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 Gene3D G3DSA:3.40.50.300 10 296 5.3E-79 T 14-10-2018 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 PIRSF PIRSF001327 1 571 3.9E-256 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 16 295 3.4E-71 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 Gene3D G3DSA:3.40.50.300 308 568 1.6E-61 T 14-10-2018 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 SUPERFAMILY SSF52540 309 544 6.11E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 SUPERFAMILY SSF52540 13 292 7.45E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 Pfam PF02374 Anion-transporting ATPase 326 467 1.1E-26 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 Pfam PF02374 Anion-transporting ATPase 12 294 8.8E-72 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 Pfam PF02374 Anion-transporting ATPase 472 555 1.7E-7 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 11 568 8.3E-249 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 SMART SM00382 324 518 0.24 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1248 b67a83b52a6d73103b39c0b262902b15 571 SMART SM00382 11 232 2.9 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0257 edc52b766759dc962231736c71df229c 192 Gene3D G3DSA:1.25.40.340 1 192 1.2E-75 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0257 edc52b766759dc962231736c71df229c 192 SMART SM01120 31 189 3.3E-66 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0257 edc52b766759dc962231736c71df229c 192 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 188 2.2E-68 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 llmg_0257 edc52b766759dc962231736c71df229c 192 SUPERFAMILY SSF101473 2 190 6.02E-56 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_0257 edc52b766759dc962231736c71df229c 192 Pfam PF02734 DAK2 domain 31 188 2.1E-47 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 llmg_1274 949842b653782262e3c1dc9753548981 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 2.9E-50 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 llmg_1274 949842b653782262e3c1dc9753548981 126 SUPERFAMILY SSF55298 3 125 6.13E-43 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 llmg_1274 949842b653782262e3c1dc9753548981 126 Gene3D G3DSA:3.30.1330.40 1 124 2.2E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 llmg_1274 949842b653782262e3c1dc9753548981 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 llmg_1274 949842b653782262e3c1dc9753548981 126 Pfam PF01042 Endoribonuclease L-PSP 7 123 2.3E-40 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 Gene3D G3DSA:3.40.50.720 8 246 6.6E-72 T 14-10-2018 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 SUPERFAMILY SSF51735 5 148 3.56E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 124 258 1.6E-30 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 259 3.5E-72 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 SUPERFAMILY SSF55347 122 230 2.62E-39 T 14-10-2018 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 PIRSF PIRSF000161 4 260 3.6E-67 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 259 29.334 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 143 160 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 Gene3D G3DSA:3.30.360.10 122 228 6.6E-72 T 14-10-2018 llmg_0940 4d404ddf97ff6475dbf35993753ac200 260 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 121 2.5E-28 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 llmg_0904 be5c0d82522778f1c4b7b063ad8e0a8d 303 SUPERFAMILY SSF54001 188 283 6.87E-12 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_0904 be5c0d82522778f1c4b7b063ad8e0a8d 303 Gene3D G3DSA:3.90.1720.10 186 301 3.2E-26 T 14-10-2018 llmg_0904 be5c0d82522778f1c4b7b063ad8e0a8d 303 Pfam PF05257 CHAP domain 192 275 5.6E-15 T 14-10-2018 IPR007921 CHAP domain llmg_1495 72da8f2d15d9fed6da6bb7c426bab0d6 132 Pfam PF09148 Domain of unknown function (DUF1934) 3 120 1.2E-16 T 14-10-2018 IPR015231 Protein of unknown function DUF1934 llmg_1495 72da8f2d15d9fed6da6bb7c426bab0d6 132 Gene3D G3DSA:2.40.128.20 1 128 7.9E-12 T 14-10-2018 IPR012674 Calycin llmg_1495 72da8f2d15d9fed6da6bb7c426bab0d6 132 SUPERFAMILY SSF50814 1 124 2.53E-26 T 14-10-2018 IPR012674 Calycin llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 2.7E-52 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 Gene3D G3DSA:3.40.50.880 163 357 5.1E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 Gene3D G3DSA:3.50.30.20 2 149 2.0E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 SMART SM01097 2 132 3.2E-87 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 Pfam PF00117 Glutamine amidotransferase class-I 175 350 2.0E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 SUPERFAMILY SSF52317 138 355 6.05E-59 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 353 2.3E-147 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00097 Anthranilate synthase component II signature 327 340 9.7E-7 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00097 Anthranilate synthase component II signature 242 253 9.7E-7 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00097 Anthranilate synthase component II signature 215 224 9.7E-7 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 356 47.408 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 1.0E-11 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.0E-11 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 1.0E-11 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 SUPERFAMILY SSF52021 2 145 3.66E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 1.8E-35 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 1.8E-35 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 1.8E-35 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 1.8E-35 T 14-10-2018 llmg_0894 71b65b4489656aff4a7fd7394e5be7ef 357 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 1.8E-35 T 14-10-2018 llmg_1063 d0a8e20e86419beb9ed777016fbe952a 130 SUPERFAMILY SSF53927 5 127 2.51E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 llmg_1063 d0a8e20e86419beb9ed777016fbe952a 130 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 llmg_1063 d0a8e20e86419beb9ed777016fbe952a 130 Gene3D G3DSA:3.40.140.10 1 130 2.7E-54 T 14-10-2018 llmg_1063 d0a8e20e86419beb9ed777016fbe952a 130 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 102 3.5E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain llmg_1063 d0a8e20e86419beb9ed777016fbe952a 130 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 128 8.7E-46 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 llmg_0972 7b3db567ea771a5e7f710140d2d1c975 135 SUPERFAMILY SSF51182 10 132 1.51E-25 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily llmg_0972 7b3db567ea771a5e7f710140d2d1c975 135 Pfam PF07883 Cupin domain 46 106 2.3E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel llmg_0972 7b3db567ea771a5e7f710140d2d1c975 135 Gene3D G3DSA:2.60.120.10 1 135 5.9E-46 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_2083 fe6859bff4e7530f4c9017612d3d5fcd 153 TIGRFAM TIGR01673 holin_LLH: phage holin, LL-H family 1 100 3.1E-30 T 14-10-2018 IPR010026 Phage holin, LL-H family llmg_2083 fe6859bff4e7530f4c9017612d3d5fcd 153 Pfam PF09682 Bacteriophage holin of superfamily 6 (Holin_LLH) 3 98 3.9E-10 T 14-10-2018 IPR010026 Phage holin, LL-H family llmg_0650 0ff522f1a403745ce313d3c425ca3bc8 449 Pfam PF05525 Branched-chain amino acid transport protein 8 441 5.3E-146 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 llmg_0650 0ff522f1a403745ce313d3c425ca3bc8 449 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 428 1.6E-122 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 llmg_0585 b6825d84a0667f2d6626b8e622393c1e 186 Pfam PF12732 YtxH-like protein 5 82 3.6E-21 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH llmg_0206 2b1341312e59670fa51dfa8471e7be6f 289 Gene3D G3DSA:3.90.550.10 1 289 7.6E-88 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0206 2b1341312e59670fa51dfa8471e7be6f 289 Pfam PF00483 Nucleotidyl transferase 2 237 4.3E-73 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 llmg_0206 2b1341312e59670fa51dfa8471e7be6f 289 SUPERFAMILY SSF53448 1 286 3.15E-94 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0206 2b1341312e59670fa51dfa8471e7be6f 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.2E-153 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 46 486 5.6E-157 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 SUPERFAMILY SSF53271 282 493 9.05E-72 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 Gene3D G3DSA:3.40.50.2020 306 470 1.4E-158 T 14-10-2018 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 Pfam PF13522 Glutamine amidotransferase domain 109 240 6.2E-20 T 14-10-2018 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 45 485 45.582 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 Gene3D G3DSA:3.60.20.10 46 487 1.4E-158 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 SUPERFAMILY SSF56235 46 288 9.44E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 Pfam PF00156 Phosphoribosyl transferase domain 314 419 4.2E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0977 941a02fde940d8fecc5277ed781fbb7b 506 PIRSF PIRSF000485 42 500 9.1E-177 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Gene3D G3DSA:3.30.300.20 157 239 5.6E-15 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Pfam PF13083 KH domain 162 230 1.2E-8 T 14-10-2018 llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Gene3D G3DSA:3.30.1370.50 240 304 1.9E-14 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 SUPERFAMILY SSF82708 259 302 2.31E-6 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 SMART SM01245 3 54 2.3E-17 T 14-10-2018 IPR032782 Jag, N-terminal llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 SMART SM00393 225 303 2.0E-4 T 14-10-2018 IPR001374 R3H domain GO:0003676 llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Pfam PF14804 Jag N-terminus 4 52 2.7E-16 T 14-10-2018 IPR032782 Jag, N-terminal llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Gene3D G3DSA:3.30.30.80 2 52 1.1E-14 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily llmg_0144 d0261dea9acb935bf771efd020a4ece2 304 Pfam PF01424 R3H domain 248 302 3.0E-7 T 14-10-2018 IPR001374 R3H domain GO:0003676 llmg_1538 4ba58ab9f825f329ad572111042c9b6b 193 Pfam PF00857 Isochorismatase family 19 183 7.6E-19 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 llmg_1538 4ba58ab9f825f329ad572111042c9b6b 193 SUPERFAMILY SSF52499 16 190 6.54E-26 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_1538 4ba58ab9f825f329ad572111042c9b6b 193 Gene3D G3DSA:3.40.50.850 10 193 2.0E-25 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_1548 684475d0f95044a2fba3643daf5dc66c 195 Pfam PF00149 Calcineurin-like phosphoesterase 6 177 1.1E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_1548 684475d0f95044a2fba3643daf5dc66c 195 Gene3D G3DSA:3.60.21.10 6 194 2.8E-8 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_1548 684475d0f95044a2fba3643daf5dc66c 195 SUPERFAMILY SSF56300 3 177 3.8E-11 T 14-10-2018 llmg_1548 684475d0f95044a2fba3643daf5dc66c 195 TIGRFAM TIGR03729 acc_ester: putative phosphoesterase 6 195 6.0E-59 T 14-10-2018 IPR022302 Phosphoesterase, putative llmg_2485 065ce5ac43686ff8b93207239195ed36 121 SUPERFAMILY SSF46955 14 94 9.61E-19 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_2485 065ce5ac43686ff8b93207239195ed36 121 SMART SM00422 13 81 2.6E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2485 065ce5ac43686ff8b93207239195ed36 121 Pfam PF13411 MerR HTH family regulatory protein 14 78 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_2485 065ce5ac43686ff8b93207239195ed36 121 Gene3D G3DSA:1.10.1660.10 3 85 4.0E-22 T 14-10-2018 llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 Pfam PF00106 short chain dehydrogenase 19 186 9.9E-24 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 Gene3D G3DSA:3.40.50.720 14 249 4.1E-39 T 14-10-2018 llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 SUPERFAMILY SSF51735 19 246 1.46E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 20 37 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0605 f1f4a2d68e6c039fa4d5dfbf2fe3d8aa 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Pfam PF06458 MucBP domain 275 343 4.7E-12 T 14-10-2018 IPR009459 MucBP domain llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 518 554 1.9E-4 T 14-10-2018 llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Pfam PF00746 LPXTG cell wall anchor motif 512 549 1.6E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Pfam PF07523 Bacterial Ig-like domain (group 3) 351 416 5.8E-19 T 14-10-2018 IPR022038 Bacterial Ig-like domain llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Pfam PF07523 Bacterial Ig-like domain (group 3) 423 489 1.4E-18 T 14-10-2018 IPR022038 Bacterial Ig-like domain llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Gene3D G3DSA:3.10.20.320 271 351 1.5E-17 T 14-10-2018 llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Gene3D G3DSA:2.60.40.10 352 422 1.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Gene3D G3DSA:2.60.40.10 423 494 4.9E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 SUPERFAMILY SSF49899 51 270 1.1E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily llmg_1152 43c33b70cdb7d7c438a81d64fb3031ef 556 Gene3D G3DSA:2.60.120.200 47 270 2.9E-54 T 14-10-2018 llmg_1683 a4ea881783bf126acd1918f4ccdf14f5 173 Pfam PF05656 Protein of unknown function (DUF805) 14 143 1.0E-10 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 llmg_2481 30140a4ef5908d30c99bd0ac70c7da08 90 Pfam PF01817 Chorismate mutase type II 8 85 8.6E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 llmg_2481 30140a4ef5908d30c99bd0ac70c7da08 90 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 4 84 1.9E-25 T 14-10-2018 IPR011279 Chorismate mutase, Gram-positive llmg_2481 30140a4ef5908d30c99bd0ac70c7da08 90 Gene3D G3DSA:1.20.59.10 1 89 3.1E-20 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 llmg_2481 30140a4ef5908d30c99bd0ac70c7da08 90 SUPERFAMILY SSF48600 2 86 2.44E-19 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 llmg_2481 30140a4ef5908d30c99bd0ac70c7da08 90 SMART SM00830 8 87 9.6E-20 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 SUPERFAMILY SSF53335 1 178 3.23E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 PIRSF PIRSF004553 1 179 6.4E-55 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 Pfam PF03602 Conserved hypothetical protein 95 1 177 1.2E-63 T 14-10-2018 llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 Gene3D G3DSA:3.40.50.150 1 179 4.3E-57 T 14-10-2018 llmg_2444 0dd6c2ffc269a33a7a5eed94ef09b27f 179 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 2.1E-52 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 llmg_0074 d3d38632a4029d730ef1c246aa5502fe 374 Pfam PF00676 Dehydrogenase E1 component 54 347 2.0E-79 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 llmg_0074 d3d38632a4029d730ef1c246aa5502fe 374 SUPERFAMILY SSF52518 6 369 1.2E-89 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_0074 d3d38632a4029d730ef1c246aa5502fe 374 Gene3D G3DSA:3.40.50.970 4 373 1.5E-99 T 14-10-2018 llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 Gene3D G3DSA:3.40.50.720 9 259 9.2E-63 T 14-10-2018 llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 Pfam PF00106 short chain dehydrogenase 22 208 1.7E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.7E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 SUPERFAMILY SSF51735 16 245 8.06E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 4.8E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 4.8E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 4.8E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 4.8E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1019 0adca5bce5f9108c65ac0450e5e5251c 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 4.8E-28 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0353 90689f04c93514170cde105f99a67d31 115 SUPERFAMILY SSF46785 9 101 1.6E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0353 90689f04c93514170cde105f99a67d31 115 Pfam PF01638 HxlR-like helix-turn-helix 15 102 1.1E-32 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type llmg_0353 90689f04c93514170cde105f99a67d31 115 Gene3D G3DSA:1.10.10.10 4 112 6.6E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1040 d8e5df95aa9884d9944e909030999d01 190 SUPERFAMILY SSF55729 17 187 1.12E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1040 d8e5df95aa9884d9944e909030999d01 190 Gene3D G3DSA:3.40.630.30 16 189 7.2E-24 T 14-10-2018 llmg_1040 d8e5df95aa9884d9944e909030999d01 190 Pfam PF13302 Acetyltransferase (GNAT) domain 20 161 4.0E-10 T 14-10-2018 IPR000182 GNAT domain llmg_0300 4c237c63b7114932bd1a2493c2448196 145 SUPERFAMILY SSF54427 3 139 5.85E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily llmg_0300 4c237c63b7114932bd1a2493c2448196 145 Gene3D G3DSA:3.10.450.50 1 144 3.6E-26 T 14-10-2018 llmg_0300 4c237c63b7114932bd1a2493c2448196 145 Pfam PF13577 SnoaL-like domain 4 132 5.1E-20 T 14-10-2018 IPR037401 SnoaL-like domain llmg_0625 d9dc0a97badd979b3c0215eff4e731a5 357 Pfam PF02687 FtsX-like permease family 268 351 7.9E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_0645 53ec38d5063e804f0969ccdad3ec9704 176 Pfam PF01757 Acyltransferase family 8 156 2.3E-9 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 llmg_1920 1347e64d820de38aef79d29e9cc36cfb 170 SUPERFAMILY SSF109604 21 141 7.01E-21 T 14-10-2018 llmg_1920 1347e64d820de38aef79d29e9cc36cfb 170 Pfam PF01966 HD domain 41 141 3.9E-6 T 14-10-2018 IPR006674 HD domain llmg_1920 1347e64d820de38aef79d29e9cc36cfb 170 Gene3D G3DSA:1.10.3210.10 22 163 1.2E-9 T 14-10-2018 llmg_1920 1347e64d820de38aef79d29e9cc36cfb 170 SMART SM00471 37 153 4.9E-5 T 14-10-2018 IPR003607 HD/PDEase domain llmg_0302 c413d24f2158558346360069737184ef 561 Pfam PF00753 Metallo-beta-lactamase superfamily 22 170 6.8E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0302 c413d24f2158558346360069737184ef 561 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 410 1.3E-10 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain llmg_0302 c413d24f2158558346360069737184ef 561 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 12 556 1.7E-198 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 llmg_0302 c413d24f2158558346360069737184ef 561 Gene3D G3DSA:3.10.20.580 452 557 3.1E-29 T 14-10-2018 llmg_0302 c413d24f2158558346360069737184ef 561 PIRSF PIRSF004803 3 558 1.7E-223 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 llmg_0302 c413d24f2158558346360069737184ef 561 Gene3D G3DSA:3.60.15.10 15 445 3.1E-178 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0302 c413d24f2158558346360069737184ef 561 Hamap MF_01491 Ribonuclease J [rnj]. 7 558 45.013 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 llmg_0302 c413d24f2158558346360069737184ef 561 SMART SM00849 24 218 1.1E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0302 c413d24f2158558346360069737184ef 561 Gene3D G3DSA:3.40.50.10710 210 360 3.1E-178 T 14-10-2018 llmg_0302 c413d24f2158558346360069737184ef 561 SUPERFAMILY SSF56281 14 426 4.95E-87 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0302 c413d24f2158558346360069737184ef 561 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 367 395 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 Pfam PF03288 Poxvirus D5 protein-like 434 514 5.8E-19 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 SMART SM00885 105 228 1.1E-28 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 Pfam PF08706 D5 N terminal like 112 232 8.6E-9 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 SUPERFAMILY SSF52540 217 414 6.11E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 178 480 3.6E-91 T 14-10-2018 IPR006500 DNA primase, phage/plasmid llmg_2534 94e2a4bd0fd7ba3110baa6d49eb3352e 542 Gene3D G3DSA:3.40.50.300 214 410 1.6E-11 T 14-10-2018 llmg_2183 1a94d00af9d974c7c97d6080fbdebff5 185 Pfam PF00293 NUDIX domain 44 176 4.1E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_2183 1a94d00af9d974c7c97d6080fbdebff5 185 Gene3D G3DSA:3.90.79.10 3 185 1.9E-38 T 14-10-2018 llmg_2183 1a94d00af9d974c7c97d6080fbdebff5 185 SUPERFAMILY SSF55811 41 182 1.62E-17 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_0856 4051503cf103693180ffd1a3f793b637 480 Pfam PF07690 Major Facilitator Superfamily 24 303 2.1E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0856 4051503cf103693180ffd1a3f793b637 480 SUPERFAMILY SSF103473 21 465 7.46E-45 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0856 4051503cf103693180ffd1a3f793b637 480 Gene3D G3DSA:1.20.1250.20 274 477 5.7E-12 T 14-10-2018 llmg_0856 4051503cf103693180ffd1a3f793b637 480 Gene3D G3DSA:1.20.1250.20 18 273 1.5E-32 T 14-10-2018 llmg_1688 7e3ec8b54933111203e6e3580bac918a 166 SUPERFAMILY SSF55729 3 152 2.48E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1688 7e3ec8b54933111203e6e3580bac918a 166 Gene3D G3DSA:3.40.630.30 2 149 2.8E-17 T 14-10-2018 llmg_1688 7e3ec8b54933111203e6e3580bac918a 166 Pfam PF00583 Acetyltransferase (GNAT) family 56 140 1.2E-8 T 14-10-2018 IPR000182 GNAT domain llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 Gene3D G3DSA:3.30.420.80 1 127 2.9E-53 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 Pfam PF00411 Ribosomal protein S11 17 126 9.6E-49 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 8 124 3.8E-57 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 PIRSF PIRSF002131 1 127 4.0E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 SUPERFAMILY SSF53137 12 127 4.1E-48 T 14-10-2018 llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site llmg_2355 231f53ddd827e0450411d4c5d6efefa5 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 127 33.047 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 llmg_2333 b36c626d7c0eb3333ab214ae0a9d24b2 180 SUPERFAMILY SSF52499 2 179 3.14E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_2333 b36c626d7c0eb3333ab214ae0a9d24b2 180 Gene3D G3DSA:3.40.50.850 1 180 1.1E-43 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_2333 b36c626d7c0eb3333ab214ae0a9d24b2 180 Pfam PF00857 Isochorismatase family 4 176 6.4E-38 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 llmg_0993 747c40bc7e3d6b01957c37ab16a66e5e 180 Pfam PF00156 Phosphoribosyl transferase domain 9 159 5.7E-27 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0993 747c40bc7e3d6b01957c37ab16a66e5e 180 SUPERFAMILY SSF53271 1 176 1.13E-57 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0993 747c40bc7e3d6b01957c37ab16a66e5e 180 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 8.3E-65 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 llmg_0993 747c40bc7e3d6b01957c37ab16a66e5e 180 Gene3D G3DSA:3.40.50.2020 1 180 1.7E-64 T 14-10-2018 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 SMART SM00881 83 186 7.3E-13 T 14-10-2018 IPR003781 CoA-binding GO:0048037 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 5 215 38.764 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 Gene3D G3DSA:1.10.10.10 5 80 8.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 Pfam PF06971 Putative DNA-binding protein N-terminus 10 57 1.8E-15 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 SUPERFAMILY SSF46785 11 83 1.84E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 Pfam PF02629 CoA binding domain 85 184 2.2E-25 T 14-10-2018 IPR003781 CoA-binding GO:0048037 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 Gene3D G3DSA:3.40.50.720 81 214 7.9E-44 T 14-10-2018 llmg_1514 c79cd57dff460ff29fa6d2d122fb365f 216 SUPERFAMILY SSF51735 86 212 1.18E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 Pfam PF01327 Polypeptide deformylase 20 199 2.8E-38 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 Gene3D G3DSA:3.90.45.10 5 211 2.1E-70 T 14-10-2018 IPR036821 Peptide deformylase superfamily llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 21 206 6.3E-36 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 SUPERFAMILY SSF56420 10 207 7.33E-55 T 14-10-2018 IPR036821 Peptide deformylase superfamily llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 PRINTS PR01576 Peptide deformylase signature 149 167 6.8E-29 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 PRINTS PR01576 Peptide deformylase signature 136 147 6.8E-29 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 PRINTS PR01576 Peptide deformylase signature 168 197 6.8E-29 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 PRINTS PR01576 Peptide deformylase signature 62 91 6.8E-29 T 14-10-2018 IPR023635 Peptide deformylase llmg_0532 96d4c1b5ebae772bef4d1a13229412ce 211 Hamap MF_00163 Peptide deformylase [def]. 18 210 24.708 T 14-10-2018 IPR023635 Peptide deformylase llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 SUPERFAMILY SSF50249 1 141 3.43E-50 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 PIRSF PIRSF002070 1 139 8.4E-37 T 14-10-2018 llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 Pfam PF00436 Single-strand binding protein family 2 103 3.7E-35 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 32.81 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 141 1.6E-36 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 llmg_2126 ccef7e33aa86648a1463dfca20f8444f 141 Gene3D G3DSA:2.40.50.140 1 112 1.0E-43 T 14-10-2018 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 Gene3D G3DSA:3.20.10.10 160 340 4.1E-54 T 14-10-2018 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 SUPERFAMILY SSF56752 4 336 5.23E-96 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 Gene3D G3DSA:3.30.470.10 2 159 6.7E-57 T 14-10-2018 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 30 339 8.1E-131 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 PIRSF PIRSF006468 2 340 8.0E-113 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 Pfam PF01063 Amino-transferase class IV 57 295 5.9E-32 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 llmg_1181 caa6508340a501084e1740dbc3f7874d 340 ProSitePatterns PS00770 Aminotransferases class-IV signature. 220 249 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 llmg_1003 c901e6460cceba3a1992e1ab3796be57 226 Pfam PF13610 DDE domain 72 202 3.9E-40 T 14-10-2018 IPR032874 DDE domain llmg_1003 c901e6460cceba3a1992e1ab3796be57 226 SUPERFAMILY SSF53098 69 184 2.43E-10 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1003 c901e6460cceba3a1992e1ab3796be57 226 Gene3D G3DSA:3.30.420.10 63 195 1.8E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0795 f91e110025e1106d836dde90e3740186 83 SUPERFAMILY SSF47413 9 73 1.31E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0795 f91e110025e1106d836dde90e3740186 83 Gene3D G3DSA:1.10.260.40 4 70 8.8E-6 T 14-10-2018 llmg_0795 f91e110025e1106d836dde90e3740186 83 Pfam PF01381 Helix-turn-helix 12 60 2.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0289 656aa509a7663e59e224b0ddd45cbcb5 266 Pfam PF02361 Cobalt transport protein 14 236 8.7E-49 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component llmg_0289 656aa509a7663e59e224b0ddd45cbcb5 266 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 1 264 37.062 T 14-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 llmg_2002 986b2841c98e2b1900461ab78bac6791 154 SUPERFAMILY SSF46785 2 138 1.13E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_2002 986b2841c98e2b1900461ab78bac6791 154 Pfam PF02082 Transcriptional regulator 1 83 3.4E-17 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type llmg_2002 986b2841c98e2b1900461ab78bac6791 154 Gene3D G3DSA:1.10.10.10 1 147 2.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.8E-72 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.0E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.0E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.0E-29 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-21 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 Pfam PF00347 Ribosomal protein L6 90 164 2.8E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 Gene3D G3DSA:3.90.930.12 1 82 9.0E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 Gene3D G3DSA:3.90.930.12 83 178 1.2E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 SUPERFAMILY SSF56053 1 82 6.02E-27 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.92 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 PIRSF PIRSF002162 1 177 6.1E-48 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 SUPERFAMILY SSF56053 83 177 1.11E-33 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2366 4aadd4b16387099bb08f58d7e089f864 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0342 49f3215591e922116c147e2211e4b543 231 SUPERFAMILY SSF161098 22 217 1.15E-37 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0342 49f3215591e922116c147e2211e4b543 231 Gene3D G3DSA:1.10.3720.10 21 231 2.0E-36 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0342 49f3215591e922116c147e2211e4b543 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 50 228 3.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 Gene3D G3DSA:2.10.10.20 447 490 3.1E-15 T 14-10-2018 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 Pfam PF00704 Glycosyl hydrolases family 18 45 326 1.3E-32 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 SUPERFAMILY SSF49265 357 431 1.66E-5 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 SMART SM00636 43 326 2.7E-4 T 14-10-2018 IPR011583 Chitinase II GO:0008061 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 ProSitePatterns PS01095 Chitinases family 18 active site. 154 162 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 Pfam PF02839 Carbohydrate binding domain 464 489 3.9E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 SUPERFAMILY SSF51055 448 491 1.83E-12 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 Gene3D G3DSA:2.60.40.10 359 440 2.4E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 SUPERFAMILY SSF51445 42 332 3.31E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 Gene3D G3DSA:3.20.20.80 40 358 7.0E-95 T 14-10-2018 llmg_2199 becf92e6cc8a247046ba4a7cdc9f8377 492 SMART SM00495 447 492 4.1E-11 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 llmg_1672 b0cdd5001308cdc6403647451e9283fc 224 SUPERFAMILY SSF81301 22 206 5.07E-49 T 14-10-2018 llmg_1672 b0cdd5001308cdc6403647451e9283fc 224 SMART SM00954 57 180 2.6E-39 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_1672 b0cdd5001308cdc6403647451e9283fc 224 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 1.3E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 llmg_1672 b0cdd5001308cdc6403647451e9283fc 224 Gene3D G3DSA:1.10.287.860 163 221 1.5E-19 T 14-10-2018 llmg_1672 b0cdd5001308cdc6403647451e9283fc 224 Gene3D G3DSA:3.30.460.10 7 162 7.5E-45 T 14-10-2018 llmg_2011 ae40ab3d579dd121ebbcdd1e7383617f 457 Pfam PF00324 Amino acid permease 15 440 2.2E-68 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_2011 ae40ab3d579dd121ebbcdd1e7383617f 457 PIRSF PIRSF006060 1 454 6.2E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_2011 ae40ab3d579dd121ebbcdd1e7383617f 457 Gene3D G3DSA:1.20.1740.10 7 456 8.6E-54 T 14-10-2018 llmg_0731 89a31bdedb5c38f7262f26f602756069 170 SUPERFAMILY SSF54106 120 169 7.19E-6 T 14-10-2018 llmg_0731 89a31bdedb5c38f7262f26f602756069 170 Gene3D G3DSA:3.10.350.10 119 168 3.7E-11 T 14-10-2018 IPR036779 LysM domain superfamily llmg_0731 89a31bdedb5c38f7262f26f602756069 170 SMART SM00257 120 170 1.5E-6 T 14-10-2018 IPR018392 LysM domain llmg_0731 89a31bdedb5c38f7262f26f602756069 170 Pfam PF01476 LysM domain 121 169 1.5E-9 T 14-10-2018 IPR018392 LysM domain llmg_2542 e554d1d71adb06b1dd84c3afc3663e3e 157 SUPERFAMILY SSF46689 4 52 2.22E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2542 e554d1d71adb06b1dd84c3afc3663e3e 157 Gene3D G3DSA:1.10.357.10 1 157 1.8E-19 T 14-10-2018 llmg_2542 e554d1d71adb06b1dd84c3afc3663e3e 157 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 41 4.6E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_1244 c7a839b02019a6eebff086a5e17029e5 435 Pfam PF02378 Phosphotransferase system, EIIC 26 357 2.6E-46 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_1244 c7a839b02019a6eebff086a5e17029e5 435 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 428 2.0E-98 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 llmg_1244 c7a839b02019a6eebff086a5e17029e5 435 PIRSF PIRSF006351 1 434 5.9E-127 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 418 3.0E-131 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Gene3D G3DSA:1.10.240.10 222 324 3.2E-40 T 14-10-2018 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Pfam PF01479 S4 domain 362 400 7.5E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 419 44.394 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 SUPERFAMILY SSF52374 1 322 2.91E-106 T 14-10-2018 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Gene3D G3DSA:3.40.50.620 1 221 3.4E-86 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 SUPERFAMILY SSF55174 325 418 3.27E-21 T 14-10-2018 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 182 204 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 215 227 5.0E-27 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Pfam PF00579 tRNA synthetases class I (W and Y) 30 322 1.9E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 Gene3D G3DSA:3.10.290.10 325 419 8.4E-28 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 llmg_0401 07d489c1c1abbe980342cec55b5d3094 419 SMART SM00363 353 415 6.7E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_0386 97d1f747e11c458d23a8c07099ffa51c 477 PIRSF PIRSF006060 1 476 5.0E-77 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0386 97d1f747e11c458d23a8c07099ffa51c 477 Pfam PF00324 Amino acid permease 15 465 6.3E-123 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_0386 97d1f747e11c458d23a8c07099ffa51c 477 Gene3D G3DSA:1.20.1740.10 5 471 1.3E-54 T 14-10-2018 llmg_0386 97d1f747e11c458d23a8c07099ffa51c 477 ProSitePatterns PS00218 Amino acid permeases signature. 40 71 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 llmg_2447 c49b108f372184cff09f8fa82b2446f8 368 Pfam PF13791 Sigma factor regulator C-terminal 206 355 2.0E-31 T 14-10-2018 IPR025672 Sigma factor regulator C-terminal domain llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Pfam PF07085 DRTGG domain 76 176 5.4E-26 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 SUPERFAMILY SSF75138 71 184 5.1E-26 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Gene3D G3DSA:3.10.129.10 303 422 1.6E-6 T 14-10-2018 llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 SUPERFAMILY SSF54637 330 415 9.01E-7 T 14-10-2018 IPR029069 HotDog domain superfamily llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Gene3D G3DSA:3.10.580.10 184 302 4.4E-16 T 14-10-2018 llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 SMART SM00116 197 245 0.012 T 14-10-2018 IPR000644 CBS domain llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 SMART SM00116 255 303 11.0 T 14-10-2018 IPR000644 CBS domain llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Pfam PF00571 CBS domain 190 242 1.8E-5 T 14-10-2018 IPR000644 CBS domain llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Pfam PF00571 CBS domain 252 303 4.1E-4 T 14-10-2018 IPR000644 CBS domain llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 Gene3D G3DSA:3.40.1390.20 67 177 6.3E-24 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily llmg_1826 0235752a2d26a7f7a2eb12ece25d6b98 426 SUPERFAMILY SSF54631 180 305 6.82E-22 T 14-10-2018 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 PIRSF PIRSF001563 1 427 7.5E-143 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 Gene3D G3DSA:3.90.190.20 295 427 1.5E-27 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 370 1.1E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 TIGRFAM TIGR01499 folC: bifunctional protein FolC 22 422 1.4E-124 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 Pfam PF08245 Mur ligase middle domain 44 267 7.8E-15 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 Gene3D G3DSA:3.40.1190.10 1 294 3.5E-98 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 SUPERFAMILY SSF53244 293 424 3.48E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 llmg_1334 39955d5838896f84f997b4a64e7dfbd9 427 SUPERFAMILY SSF53623 1 293 1.32E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Gene3D G3DSA:3.30.1360.30 275 414 5.1E-182 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 2.2E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 2.2E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 2.2E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 2.2E-24 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 586 32.89 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 SUPERFAMILY SSF50249 1 106 3.24E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 585 4.0E-226 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Gene3D G3DSA:3.30.930.10 120 584 5.1E-182 T 14-10-2018 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 SUPERFAMILY SSF55681 118 587 2.99E-101 T 14-10-2018 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Gene3D G3DSA:2.40.50.140 1 109 5.6E-30 T 14-10-2018 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Pfam PF02938 GAD domain 312 400 2.8E-22 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 559 4.5E-103 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 SUPERFAMILY SSF55261 292 414 9.16E-33 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 llmg_2215 aa8bbf4bfeedc16da07000fcf0579d2d 590 Pfam PF01336 OB-fold nucleic acid binding domain 20 103 1.3E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 llmg_0183 0fbd4d806d3d1ad8be3ce2b3709cebf3 143 SUPERFAMILY SSF55961 6 123 1.91E-6 T 14-10-2018 llmg_0183 0fbd4d806d3d1ad8be3ce2b3709cebf3 143 Pfam PF11687 Domain of unknown function (DUF3284) 1 119 1.3E-37 T 14-10-2018 IPR021701 Protein of unknown function DUF3284 llmg_0375 09212c00b49397baf019422b2f79faad 460 PIRSF PIRSF006060 1 459 3.4E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0375 09212c00b49397baf019422b2f79faad 460 Gene3D G3DSA:1.20.1740.10 15 459 1.2E-46 T 14-10-2018 llmg_0375 09212c00b49397baf019422b2f79faad 460 ProSitePatterns PS00218 Amino acid permeases signature. 48 78 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 llmg_0375 09212c00b49397baf019422b2f79faad 460 Pfam PF00324 Amino acid permease 23 441 5.1E-82 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_1529 703c7946f063a647437a0f7d21c150f0 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 2.2E-59 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1529 703c7946f063a647437a0f7d21c150f0 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 31.273 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1529 703c7946f063a647437a0f7d21c150f0 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 1.4E-58 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1529 703c7946f063a647437a0f7d21c150f0 154 Gene3D G3DSA:3.40.50.960 1 154 1.4E-64 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_1529 703c7946f063a647437a0f7d21c150f0 154 SUPERFAMILY SSF52121 3 153 3.27E-63 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 Pfam PF00297 Ribosomal protein L3 97 175 7.1E-14 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 Gene3D G3DSA:2.40.30.10 130 207 8.4E-16 T 14-10-2018 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 Gene3D G3DSA:2.40.50.620 33 93 3.9E-12 T 14-10-2018 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 8.3E-80 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 SUPERFAMILY SSF50447 2 205 1.15E-74 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 36.662 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2383 97cddb354f2f7f1fb0116ddb77f25e4c 207 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 Pfam PF00005 ABC transporter 18 184 3.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 SUPERFAMILY SSF52540 295 527 9.55E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 Pfam PF00005 ABC transporter 336 472 2.0E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 Pfam PF12848 ABC transporter 224 296 1.2E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 SMART SM00382 26 231 2.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 SMART SM00382 344 517 0.62 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 Gene3D G3DSA:3.40.50.300 282 543 5.8E-42 T 14-10-2018 llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 SUPERFAMILY SSF52540 7 237 9.02E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0085 af1bf29a4fbdc13550df7f35f7bda62e 545 Gene3D G3DSA:3.40.50.300 2 279 2.7E-56 T 14-10-2018 llmg_1859 ef3036c5573bc957f946241da9a87112 162 Pfam PF12724 Flavodoxin domain 4 139 1.2E-19 T 14-10-2018 IPR026816 Flavodoxin domain llmg_1859 ef3036c5573bc957f946241da9a87112 162 SUPERFAMILY SSF52218 1 98 6.64E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_1859 ef3036c5573bc957f946241da9a87112 162 Gene3D G3DSA:3.40.50.360 3 132 1.8E-12 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 7 424 2.3E-188 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 424 1.3E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 Gene3D G3DSA:3.40.640.10 3 287 9.4E-99 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 PIRSF PIRSF001434 1 426 4.1E-126 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 Gene3D G3DSA:3.90.1150.10 291 426 1.6E-46 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0091 6dac1eed462c04fe834dc04e974e7ed2 426 SUPERFAMILY SSF53383 6 424 9.31E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_1970 48c4ad1a0847321d7a886b65edbc93e1 152 Pfam PF01592 NifU-like N terminal domain 10 127 2.7E-24 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 llmg_1970 48c4ad1a0847321d7a886b65edbc93e1 152 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 139 5.8E-52 T 14-10-2018 llmg_1970 48c4ad1a0847321d7a886b65edbc93e1 152 Gene3D G3DSA:3.90.1010.10 2 144 1.3E-51 T 14-10-2018 llmg_1970 48c4ad1a0847321d7a886b65edbc93e1 152 SUPERFAMILY SSF82649 3 140 1.88E-47 T 14-10-2018 llmg_1250 02f73d76abc0c159fc59a4bb064810b3 350 Gene3D G3DSA:1.20.1530.20 1 339 2.5E-26 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily llmg_1250 02f73d76abc0c159fc59a4bb064810b3 350 Pfam PF01758 Sodium Bile acid symporter family 53 249 1.0E-63 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 llmg_1250 02f73d76abc0c159fc59a4bb064810b3 350 PIRSF PIRSF005508 1 350 3.6E-139 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 llmg_1250 02f73d76abc0c159fc59a4bb064810b3 350 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 8 337 8.7E-137 T 14-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 llmg_2014 132fa6e333d2112d12224bd6cdfc771d 115 Gene3D G3DSA:1.10.287.1080 2 110 7.2E-18 T 14-10-2018 llmg_2014 132fa6e333d2112d12224bd6cdfc771d 115 PIRSF PIRSF006639 1 115 2.0E-35 T 14-10-2018 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 llmg_2014 132fa6e333d2112d12224bd6cdfc771d 115 SUPERFAMILY SSF101386 1 104 4.74E-20 T 14-10-2018 llmg_2014 132fa6e333d2112d12224bd6cdfc771d 115 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 33 103 5.8E-15 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core llmg_0459 4ddbe2d1abef1d85c87a4c4b0b1202ca 148 Gene3D G3DSA:3.40.50.300 1 148 6.1E-34 T 14-10-2018 llmg_0459 4ddbe2d1abef1d85c87a4c4b0b1202ca 148 SUPERFAMILY SSF52540 16 116 3.0E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0459 4ddbe2d1abef1d85c87a4c4b0b1202ca 148 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 4 121 1.9E-31 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 llmg_0459 4ddbe2d1abef1d85c87a4c4b0b1202ca 148 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 4 118 1.1E-30 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 Pfam PF00005 ABC transporter 314 459 3.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 SUPERFAMILY SSF52540 2 235 5.21E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 Pfam PF12558 ATP-binding cassette cobalt transporter 236 305 7.6E-13 T 14-10-2018 IPR022216 Putative ABC cobalt transporter llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 Pfam PF00005 ABC transporter 22 171 3.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 Gene3D G3DSA:3.40.50.300 295 562 5.6E-63 T 14-10-2018 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 Gene3D G3DSA:3.40.50.300 1 259 1.1E-60 T 14-10-2018 llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 SUPERFAMILY SSF52540 291 524 1.6E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 SMART SM00382 31 222 6.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0344 b69eab0912ae1e1e82bc4341db6b23a2 565 SMART SM00382 323 508 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 PIRSF PIRSF036894 2 315 1.5E-130 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 SUPERFAMILY SSF51182 2 311 1.56E-105 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 Pfam PF01238 Phosphomannose isomerase type I 5 313 3.1E-52 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 Gene3D G3DSA:2.60.120.10 226 313 1.2E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 Gene3D G3DSA:2.60.120.10 1 222 2.9E-90 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_1789 7b1d5dce850e4bdc4c262b9e1cd3da35 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 104 312 8.5E-47 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 llmg_0514 2d170f4482d0ccb62643248e73c1376b 133 Hamap MF_01132 Regulatory protein Spx [spxA]. 6 131 36.418 T 14-10-2018 IPR023731 Regulatory protein Spx GO:0045892 llmg_0514 2d170f4482d0ccb62643248e73c1376b 133 Gene3D G3DSA:3.40.30.10 6 125 7.6E-45 T 14-10-2018 llmg_0514 2d170f4482d0ccb62643248e73c1376b 133 Pfam PF03960 ArsC family 10 118 7.9E-23 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_0514 2d170f4482d0ccb62643248e73c1376b 133 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 7 119 1.0E-34 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_0514 2d170f4482d0ccb62643248e73c1376b 133 SUPERFAMILY SSF52833 7 130 1.37E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0614 dfa7cc30f636eb2d9665b3b2d7ba9dbf 151 Gene3D G3DSA:1.10.10.1240 5 73 4.5E-31 T 14-10-2018 llmg_0614 dfa7cc30f636eb2d9665b3b2d7ba9dbf 151 Gene3D G3DSA:1.10.1200.150 75 146 1.2E-8 T 14-10-2018 llmg_0614 dfa7cc30f636eb2d9665b3b2d7ba9dbf 151 PIRSF PIRSF010607 2 149 4.7E-58 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 llmg_0614 dfa7cc30f636eb2d9665b3b2d7ba9dbf 151 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 6 130 8.6E-45 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 llmg_1899 6d56c4a38e668ad6954a57fe082d4ff3 307 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 20 304 1.2E-86 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 llmg_1899 6d56c4a38e668ad6954a57fe082d4ff3 307 SUPERFAMILY SSF161098 24 299 4.84E-37 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1899 6d56c4a38e668ad6954a57fe082d4ff3 307 Gene3D G3DSA:1.10.3720.10 82 305 1.0E-33 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1899 6d56c4a38e668ad6954a57fe082d4ff3 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 302 3.9E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 SUPERFAMILY SSF54849 136 203 1.58E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 Gene3D G3DSA:3.30.260.10 135 408 7.3E-225 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 7.4E-247 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 40.202 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 SUPERFAMILY SSF48592 6 518 4.08E-80 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 SUPERFAMILY SSF52029 182 374 3.29E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 PRINTS PR00298 60kDa chaperonin signature 396 417 1.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 PRINTS PR00298 60kDa chaperonin signature 266 289 1.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 PRINTS PR00298 60kDa chaperonin signature 348 373 1.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 PRINTS PR00298 60kDa chaperonin signature 82 109 1.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 PRINTS PR00298 60kDa chaperonin signature 26 52 1.8E-72 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 Gene3D G3DSA:1.10.560.10 7 518 7.3E-225 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 Gene3D G3DSA:3.50.7.10 190 370 7.3E-225 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily llmg_0411 961fb1d8ce79679bae6705e51e8cfdde 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 6.1E-105 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 SUPERFAMILY SSF53448 20 307 1.31E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 SUPERFAMILY SSF51161 292 372 1.3E-13 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 Gene3D G3DSA:3.90.550.10 1 274 1.5E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 5 374 2.0E-156 T 14-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 Pfam PF00483 Nucleotidyl transferase 18 256 5.7E-12 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 llmg_1873 1b06248bda0ea76a1a222cbf34e013c3 379 Gene3D G3DSA:2.160.10.10 275 378 1.8E-21 T 14-10-2018 llmg_0241 e02cf14a933347608a6c8a7ea9de8965 379 Gene3D G3DSA:3.40.50.620 1 223 5.6E-40 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_0241 e02cf14a933347608a6c8a7ea9de8965 379 Hamap MF_01539 UPF0348 protein . 3 375 33.652 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 llmg_0241 e02cf14a933347608a6c8a7ea9de8965 379 SUPERFAMILY SSF52374 11 199 9.07E-16 T 14-10-2018 llmg_0241 e02cf14a933347608a6c8a7ea9de8965 379 Pfam PF05636 HIGH Nucleotidyl Transferase 3 360 1.7E-104 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 llmg_1828 067ce82cf4eb843407568b8bf7b15091 383 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 69 383 4.3E-98 T 14-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 llmg_1828 067ce82cf4eb843407568b8bf7b15091 383 Gene3D G3DSA:3.60.120.10 2 383 3.4E-81 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_1828 067ce82cf4eb843407568b8bf7b15091 383 SUPERFAMILY SSF56322 42 383 3.27E-71 T 14-10-2018 IPR005801 ADC synthase GO:0009058 llmg_1828 067ce82cf4eb843407568b8bf7b15091 383 Pfam PF00425 chorismate binding enzyme 130 375 3.0E-60 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal llmg_1361 127121058fbb5dc0f9dddd151cb89d2a 357 SUPERFAMILY SSF56349 189 353 5.3E-30 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1361 127121058fbb5dc0f9dddd151cb89d2a 357 Gene3D G3DSA:1.10.443.10 174 357 1.8E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1361 127121058fbb5dc0f9dddd151cb89d2a 357 Gene3D G3DSA:1.10.150.130 13 150 3.3E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_1361 127121058fbb5dc0f9dddd151cb89d2a 357 Pfam PF00589 Phage integrase family 175 346 4.4E-20 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0890 0aac2f1bbd81c25b71db46aa584fe09f 173 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 171 36.657 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 llmg_0890 0aac2f1bbd81c25b71db46aa584fe09f 173 SUPERFAMILY SSF53271 4 166 8.92E-38 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0890 0aac2f1bbd81c25b71db46aa584fe09f 173 Pfam PF00156 Phosphoribosyl transferase domain 8 157 8.7E-24 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0890 0aac2f1bbd81c25b71db46aa584fe09f 173 Gene3D G3DSA:3.40.50.2020 1 173 1.6E-54 T 14-10-2018 llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 SUPERFAMILY SSF53850 52 582 1.36E-86 T 14-10-2018 llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 Gene3D G3DSA:3.40.190.10 24 323 9.4E-39 T 14-10-2018 llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 108 130 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 PIRSF PIRSF002741 4 590 9.7E-60 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 513 2.0E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_0701 952d7f5b5e63a0214ff149f984e61298 600 Gene3D G3DSA:3.10.105.10 324 561 3.8E-98 T 14-10-2018 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 5 325 1.5E-117 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 4 326 79.259 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 50 69 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 132 143 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 261 270 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 290 313 1.8E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 5 145 7.5E-43 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 SUPERFAMILY SSF53671 2 327 2.75E-96 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 Gene3D G3DSA:3.40.50.1370 3 322 1.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 48 62 2.4E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 304 315 2.4E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 121 135 2.4E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 224 234 2.4E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 81 94 2.4E-29 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 Gene3D G3DSA:3.40.50.1370 148 312 1.6E-125 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 152 323 3.4E-51 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 llmg_1754 0fc4d1c6d863c0149f970aa13e9c0869 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 50 57 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 SUPERFAMILY SSF46785 155 224 1.69E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 SUPERFAMILY SSF51206 17 151 1.96E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 SMART SM00419 172 220 1.7E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 Pfam PF13545 Crp-like helix-turn-helix domain 159 226 2.8E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 Pfam PF00027 Cyclic nucleotide-binding domain 41 125 2.0E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 8.1E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 8.1E-6 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 SMART SM00100 21 138 7.6E-13 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain llmg_0694 907e84f4a5ac677c380da9bb36fd2c4c 229 Gene3D G3DSA:2.60.120.1460 25 227 6.9E-45 T 14-10-2018 llmg_1136 3cd218f96d81aca859699eaaffd21342 237 SMART SM00382 26 217 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1136 3cd218f96d81aca859699eaaffd21342 237 Pfam PF00005 ABC transporter 17 161 7.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1136 3cd218f96d81aca859699eaaffd21342 237 SUPERFAMILY SSF52540 4 223 1.36E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1136 3cd218f96d81aca859699eaaffd21342 237 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1136 3cd218f96d81aca859699eaaffd21342 237 Gene3D G3DSA:3.40.50.300 1 235 5.9E-55 T 14-10-2018 llmg_0260 d3415d2e510f3accc929b73a16c55f4a 460 Gene3D G3DSA:3.60.60.10 3 198 1.3E-10 T 14-10-2018 llmg_0260 d3415d2e510f3accc929b73a16c55f4a 460 Pfam PF03577 Peptidase family C69 2 399 1.4E-177 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 llmg_1449 03dfa0f7df8fa53b26a0fd0e010d7e16 250 SUPERFAMILY SSF63817 30 225 2.09E-47 T 14-10-2018 IPR023365 Sortase domain superfamily llmg_1449 03dfa0f7df8fa53b26a0fd0e010d7e16 250 Gene3D G3DSA:2.40.260.10 71 248 3.8E-49 T 14-10-2018 IPR023365 Sortase domain superfamily llmg_1449 03dfa0f7df8fa53b26a0fd0e010d7e16 250 TIGRFAM TIGR01076 sortase_fam: sortase 97 222 6.0E-23 T 14-10-2018 IPR005754 Sortase family llmg_1449 03dfa0f7df8fa53b26a0fd0e010d7e16 250 Pfam PF04203 Sortase family 99 222 4.6E-28 T 14-10-2018 IPR005754 Sortase family llmg_1720 4c060cb6ea3dd81682c2a1c8311853b5 238 SUPERFAMILY SSF53167 5 204 1.01E-57 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 llmg_1720 4c060cb6ea3dd81682c2a1c8311853b5 238 Gene3D G3DSA:3.40.50.1580 1 238 8.0E-66 T 14-10-2018 llmg_1720 4c060cb6ea3dd81682c2a1c8311853b5 238 Pfam PF01048 Phosphorylase superfamily 19 196 4.2E-32 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 llmg_1720 4c060cb6ea3dd81682c2a1c8311853b5 238 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 63 78 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 llmg_0794 aceab5d7056705afb569e1646ad3016f 269 Pfam PF09509 Protein of unknown function (Hypoth_ymh) 136 258 8.4E-26 T 14-10-2018 IPR012654 Conserved hypothetical protein CHP02391 llmg_0794 aceab5d7056705afb569e1646ad3016f 269 TIGRFAM TIGR02391 hypoth_ymh: TIGR02391 family protein 137 261 3.4E-28 T 14-10-2018 IPR012654 Conserved hypothetical protein CHP02391 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 288 36.566 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 Gene3D G3DSA:3.55.30.10 1 235 2.2E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 PIRSF PIRSF005261 1 288 6.5E-69 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 Gene3D G3DSA:3.90.1280.10 236 288 2.9E-19 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 SUPERFAMILY SSF118352 231 288 3.4E-18 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 SUPERFAMILY SSF64397 4 241 2.49E-67 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 llmg_2204 726e9a1ffd8da37005a3d15b4fc606e7 288 Pfam PF01430 Hsp33 protein 2 278 1.3E-80 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 SUPERFAMILY SSF49785 553 761 5.1E-68 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Gene3D G3DSA:2.60.120.260 226 757 3.2E-239 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Pfam PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal 1 143 2.1E-40 T 14-10-2018 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 530 752 4.9E-20 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 186 500 1.0E-80 T 14-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Gene3D G3DSA:1.10.246.70 214 447 3.2E-239 T 14-10-2018 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 SMART SM00939 514 755 2.1E-42 T 14-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Hamap MF_00698 Xaa-Pro dipeptidyl-peptidase [pepX]. 1 758 35.088 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 SUPERFAMILY SSF81761 1 145 1.96E-47 T 14-10-2018 IPR036313 PepX, N-terminal domain superfamily llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 371 387 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 723 738 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 200 216 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 168 178 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 152 164 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 186 195 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 PRINTS PR00923 Lactococcus X-Pro dipeptidyl-peptidase (S15) family signature 506 522 2.8E-47 T 14-10-2018 IPR008252 Peptidase S15, X-Pro dipeptidyl-peptidase GO:0004177|GO:0006508 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 SMART SM00940 1 143 2.5E-63 T 14-10-2018 IPR015251 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain GO:0006508|GO:0008239 llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 Gene3D G3DSA:3.40.50.1820 169 677 3.2E-239 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_2328 645696d37e9f55f5d2499cb593c0258b 763 SUPERFAMILY SSF53474 147 550 6.61E-103 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0825 624f572820829a0c6287391b0aa8f684 411 Pfam PF03237 Terminase-like family 115 231 8.3E-7 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type llmg_0825 624f572820829a0c6287391b0aa8f684 411 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 27 394 3.7E-49 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 llmg_0825 624f572820829a0c6287391b0aa8f684 411 Pfam PF17289 Terminase RNaseH-like domain 250 389 1.4E-5 T 14-10-2018 IPR035421 Terminase, large subunit gp17-like llmg_0825 624f572820829a0c6287391b0aa8f684 411 Gene3D G3DSA:3.40.50.300 12 221 3.0E-23 T 14-10-2018 llmg_0825 624f572820829a0c6287391b0aa8f684 411 Gene3D G3DSA:3.30.420.280 222 399 1.6E-32 T 14-10-2018 llmg_2458 d23cba5d577910e5667cb541818e452a 218 Pfam PF07299 Elongation factor G-binding protein, N-terminal 1 94 1.5E-25 T 14-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal llmg_2458 d23cba5d577910e5667cb541818e452a 218 Gene3D G3DSA:1.20.1280.250 1 93 5.8E-13 T 14-10-2018 IPR038344 EF-G binding protein, N-terminal domain superfamily llmg_2546 385287c9839f8a10c9616660aba5113c 148 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 26.017 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 llmg_2546 385287c9839f8a10c9616660aba5113c 148 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 144 9.7E-58 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2546 385287c9839f8a10c9616660aba5113c 148 Gene3D G3DSA:3.90.1180.10 2 144 4.9E-57 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2546 385287c9839f8a10c9616660aba5113c 148 PIRSF PIRSF002181 1 147 4.4E-47 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 llmg_2546 385287c9839f8a10c9616660aba5113c 148 Pfam PF00572 Ribosomal protein L13 16 140 9.4E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 llmg_2546 385287c9839f8a10c9616660aba5113c 148 SUPERFAMILY SSF52161 6 144 4.32E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 llmg_2546 385287c9839f8a10c9616660aba5113c 148 ProSitePatterns PS00783 Ribosomal protein L13 signature. 107 129 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 llmg_2395 13b1a78dbf64353056c27ced0929c4f5 138 SUPERFAMILY SSF50475 14 137 2.45E-24 T 14-10-2018 llmg_2395 13b1a78dbf64353056c27ced0929c4f5 138 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 15 110 1.5E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 llmg_2395 13b1a78dbf64353056c27ced0929c4f5 138 Gene3D G3DSA:2.30.110.10 14 138 1.4E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 SUPERFAMILY SSF51556 1 255 4.47E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 Pfam PF01026 TatD related DNase 4 253 3.0E-75 T 14-10-2018 IPR001130 TatD family GO:0016788 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 3.9E-79 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 PIRSF PIRSF005902 1 257 1.6E-80 T 14-10-2018 IPR001130 TatD family GO:0016788 llmg_1885 3d9bb2fdef8d2e422d5494a4c2b10517 257 Gene3D G3DSA:3.20.20.140 1 257 4.8E-90 T 14-10-2018 llmg_1122 9cfc680edc8e00ccdf32ff0bfdb3fa49 364 Pfam PF02653 Branched-chain amino acid transport system / permease component 52 335 1.4E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 717 1.6E-269 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Gene3D G3DSA:2.40.50.140 57 136 3.3E-10 T 14-10-2018 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SUPERFAMILY SSF50249 220 635 5.39E-143 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Pfam PF08206 Ribonuclease B OB domain 74 128 1.8E-14 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 715 1.3E-185 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Gene3D G3DSA:2.40.50.140 638 751 5.6E-22 T 14-10-2018 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SMART SM00316 635 717 5.4E-12 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Pfam PF00575 S1 RNA binding domain 636 715 8.8E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SUPERFAMILY SSF50249 636 714 4.55E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Pfam PF00773 RNB domain 259 585 6.3E-114 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SUPERFAMILY SSF50249 70 136 8.38E-8 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 Hamap MF_01895 Ribonuclease R [rnr]. 25 717 58.195 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SUPERFAMILY SSF50249 128 235 1.31E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site llmg_1586 8df91c2cb6424dd03bf98193a8aad980 819 SMART SM00955 259 588 1.1E-173 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 PIRSF PIRSF005917 8 291 7.4E-94 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 20 289 1.0E-79 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 19 237 35.66 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 20 218 3.4E-22 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 Gene3D G3DSA:3.30.950.10 127 240 1.4E-35 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 SUPERFAMILY SSF53790 18 235 3.53E-78 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 97 108 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 llmg_0419 ef5df7493b80f2c556bddca7478e9203 291 Gene3D G3DSA:3.40.1010.10 3 126 8.8E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 llmg_1771 2d114da71426697ac1e249380b6200be 102 Gene3D G3DSA:3.40.250.10 8 98 6.1E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1771 2d114da71426697ac1e249380b6200be 102 Pfam PF00581 Rhodanese-like domain 12 97 3.8E-17 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1771 2d114da71426697ac1e249380b6200be 102 SMART SM00450 11 102 2.8E-20 T 14-10-2018 IPR001763 Rhodanese-like domain llmg_1771 2d114da71426697ac1e249380b6200be 102 SUPERFAMILY SSF52821 4 98 5.24E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily llmg_1637 dd9a082ba2dd87954e5ffe7595c2c4e4 425 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 3 420 1.0E-168 T 14-10-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes llmg_1637 dd9a082ba2dd87954e5ffe7595c2c4e4 425 PIRSF PIRSF005348 1 425 4.7E-152 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 llmg_1637 dd9a082ba2dd87954e5ffe7595c2c4e4 425 Pfam PF03390 2-hydroxycarboxylate transporter family 9 418 1.0E-136 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 Pfam PF13305 WHG domain 83 160 2.2E-9 T 14-10-2018 IPR025996 WHG domain llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 53 1.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 Gene3D G3DSA:1.10.10.60 1 48 8.3E-15 T 14-10-2018 llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 SUPERFAMILY SSF48498 78 185 3.78E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 Gene3D G3DSA:1.10.357.10 50 186 2.7E-21 T 14-10-2018 llmg_0141 e0cf561404bef6f3a72e983e267a686e 191 SUPERFAMILY SSF46689 6 71 1.13E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0950 a5866957aef275c9aafc8c43454456b2 324 SUPERFAMILY SSF51735 2 164 7.13E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0950 a5866957aef275c9aafc8c43454456b2 324 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 6.2E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 llmg_0950 a5866957aef275c9aafc8c43454456b2 324 Gene3D G3DSA:3.40.50.720 1 119 3.5E-31 T 14-10-2018 llmg_0950 a5866957aef275c9aafc8c43454456b2 324 SUPERFAMILY SSF55347 126 286 6.38E-21 T 14-10-2018 llmg_0950 a5866957aef275c9aafc8c43454456b2 324 Gene3D G3DSA:3.30.360.10 120 317 3.6E-37 T 14-10-2018 llmg_0932 3a3d1218a533a45c91fde5391a17edce 90 Pfam PF00886 Ribosomal protein S16 9 67 3.9E-26 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0932 3a3d1218a533a45c91fde5391a17edce 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 8.5E-36 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0932 3a3d1218a533a45c91fde5391a17edce 90 SUPERFAMILY SSF54565 3 86 1.11E-34 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0932 3a3d1218a533a45c91fde5391a17edce 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.99 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0932 3a3d1218a533a45c91fde5391a17edce 90 Gene3D G3DSA:3.30.1320.10 1 90 2.1E-38 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0083 78cce50934d7d071c858a934b2d13711 331 Gene3D G3DSA:3.40.718.10 1 331 1.0E-119 T 14-10-2018 llmg_0083 78cce50934d7d071c858a934b2d13711 331 SUPERFAMILY SSF53659 1 326 5.35E-96 T 14-10-2018 llmg_0083 78cce50934d7d071c858a934b2d13711 331 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 329 8.4E-100 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 llmg_0083 78cce50934d7d071c858a934b2d13711 331 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 331 128.94 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 llmg_0083 78cce50934d7d071c858a934b2d13711 331 Pfam PF02504 Fatty acid synthesis protein 1 319 2.8E-98 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 llmg_0083 78cce50934d7d071c858a934b2d13711 331 PIRSF PIRSF002465 1 331 6.7E-116 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 llmg_0971 a592e59fad3df9893c253b879d6a52ae 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 78 3.4E-9 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain llmg_0971 a592e59fad3df9893c253b879d6a52ae 97 Gene3D G3DSA:3.30.70.100 4 96 9.4E-13 T 14-10-2018 llmg_0971 a592e59fad3df9893c253b879d6a52ae 97 SUPERFAMILY SSF54909 2 95 4.13E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel llmg_1500 8fd4522a57cbaaf3f4c49e74638c27bb 229 SUPERFAMILY SSF53335 8 139 1.31E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1500 8fd4522a57cbaaf3f4c49e74638c27bb 229 PIRSF PIRSF018637 4 229 2.2E-84 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 llmg_1500 8fd4522a57cbaaf3f4c49e74638c27bb 229 Gene3D G3DSA:3.40.50.150 1 164 1.7E-57 T 14-10-2018 llmg_1500 8fd4522a57cbaaf3f4c49e74638c27bb 229 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 226 5.4E-82 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 llmg_0637 be4553d1a54adf10488a544edf9c8ab0 412 SMART SM01329 17 405 7.3E-169 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 llmg_0637 be4553d1a54adf10488a544edf9c8ab0 412 Gene3D G3DSA:3.40.718.10 1 410 1.0E-154 T 14-10-2018 llmg_0637 be4553d1a54adf10488a544edf9c8ab0 412 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 300 319 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 llmg_0637 be4553d1a54adf10488a544edf9c8ab0 412 SUPERFAMILY SSF53659 2 409 5.95E-130 T 14-10-2018 llmg_0637 be4553d1a54adf10488a544edf9c8ab0 412 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 18 404 7.3E-108 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 PIRSF PIRSF000371 5 58 3.3E-14 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 PIRSF PIRSF000371 52 257 1.6E-38 T 14-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 Gene3D G3DSA:3.20.20.70 10 257 2.2E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 15 251 1.5E-93 T 14-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 Pfam PF13353 4Fe-4S single cluster domain 24 159 6.7E-18 T 14-10-2018 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 ProSitePatterns PS01087 Radical activating enzymes signature. 26 47 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 SUPERFAMILY SSF102114 30 233 1.31E-26 T 14-10-2018 llmg_1997 4c0d4e716eb8eb6d7acddc2cdd619f94 263 Pfam PF04055 Radical SAM superfamily 32 195 7.1E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 llmg_1545 fcb60af26d11f010b8265b0aad53d3fa 311 PIRSF PIRSF003097 1 311 3.2E-71 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 llmg_1545 fcb60af26d11f010b8265b0aad53d3fa 311 Pfam PF02687 FtsX-like permease family 214 310 8.1E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_0322 690a01383c8872303daf5af6f734aceb 427 SUPERFAMILY SSF160240 212 289 1.57E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 llmg_0322 690a01383c8872303daf5af6f734aceb 427 Pfam PF01545 Cation efflux family 17 208 1.7E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_0322 690a01383c8872303daf5af6f734aceb 427 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 289 1.2E-58 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 llmg_0322 690a01383c8872303daf5af6f734aceb 427 SUPERFAMILY SSF161111 9 210 7.85E-49 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_0322 690a01383c8872303daf5af6f734aceb 427 Gene3D G3DSA:1.20.1510.10 12 208 5.7E-48 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily llmg_0322 690a01383c8872303daf5af6f734aceb 427 Gene3D G3DSA:3.30.70.1350 209 290 4.0E-16 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 llmg_0322 690a01383c8872303daf5af6f734aceb 427 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 289 6.0E-17 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain llmg_0327 235e87923468cf38ead3f9350fb65c2a 72 PIRSF PIRSF037246 1 72 6.5E-39 T 14-10-2018 IPR017154 Uncharacterised conserved protein UCP037246 llmg_0327 235e87923468cf38ead3f9350fb65c2a 72 Gene3D G3DSA:2.30.31.70 1 72 5.2E-33 T 14-10-2018 llmg_0327 235e87923468cf38ead3f9350fb65c2a 72 Pfam PF02229 Transcriptional Coactivator p15 (PC4) 20 67 8.0E-10 T 14-10-2018 IPR003173 Transcriptional coactivator p15 (PC4) GO:0003677|GO:0006355 llmg_2467 f11e49076b1acb3958997185a83ca6ab 471 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 468 6.9E-161 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 llmg_2467 f11e49076b1acb3958997185a83ca6ab 471 Pfam PF02447 GntP family permease 3 468 1.0E-156 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 llmg_2467 f11e49076b1acb3958997185a83ca6ab 471 PIRSF PIRSF002746 1 471 1.7E-163 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PIRSF PIRSF000723 1 314 1.1E-117 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 Pfam PF00696 Amino acid kinase family 4 296 3.3E-31 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 SUPERFAMILY SSF53633 3 312 1.05E-80 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 TIGRFAM TIGR00746 arcC: carbamate kinase 3 313 1.9E-120 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 3.0E-59 T 14-10-2018 llmg_2309 e4ec5e43cfe3225651ff138dd98c5431 314 Gene3D G3DSA:3.40.1160.10 1 313 1.8E-117 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily llmg_1326 887273832d0e1ebd616eaab6a3fe1a07 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 247 4.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1326 887273832d0e1ebd616eaab6a3fe1a07 266 SUPERFAMILY SSF161098 9 253 1.87E-48 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1326 887273832d0e1ebd616eaab6a3fe1a07 266 Gene3D G3DSA:1.10.3720.10 6 260 1.9E-41 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1644 ca0aecd57fee878c8d1258ce4d6487de 201 Pfam PF09335 SNARE associated Golgi protein 71 190 1.4E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein llmg_1557 a1f5b88def5426f675624bbc47e35f00 295 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 5 287 40.863 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 llmg_1557 a1f5b88def5426f675624bbc47e35f00 295 Pfam PF03668 P-loop ATPase protein family 6 288 2.3E-106 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 llmg_1557 a1f5b88def5426f675624bbc47e35f00 295 PIRSF PIRSF005052 5 290 4.9E-109 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 llmg_1557 a1f5b88def5426f675624bbc47e35f00 295 SUPERFAMILY SSF52540 7 160 7.48E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0239 bf1c342894c111c05577e93afc241e47 119 SUPERFAMILY SSF81301 2 114 9.97E-34 T 14-10-2018 llmg_0239 bf1c342894c111c05577e93afc241e47 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 106 23.325 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS llmg_0239 bf1c342894c111c05577e93afc241e47 119 Gene3D G3DSA:3.30.460.10 2 109 2.9E-32 T 14-10-2018 llmg_0239 bf1c342894c111c05577e93afc241e47 119 Pfam PF02410 Ribosomal silencing factor during starvation 9 105 7.6E-22 T 14-10-2018 llmg_0239 bf1c342894c111c05577e93afc241e47 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 105 1.0E-29 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS llmg_0335 be2c83d4f1371cf13d2af261fde999f4 286 Pfam PF03180 NLPA lipoprotein 40 281 1.5E-94 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0335 be2c83d4f1371cf13d2af261fde999f4 286 Gene3D G3DSA:3.40.190.10 48 271 1.5E-85 T 14-10-2018 llmg_0335 be2c83d4f1371cf13d2af261fde999f4 286 Gene3D G3DSA:3.40.190.10 121 230 1.5E-85 T 14-10-2018 llmg_0335 be2c83d4f1371cf13d2af261fde999f4 286 PIRSF PIRSF002854 2 281 3.1E-94 T 14-10-2018 IPR004872 Lipoprotein NlpA family llmg_0335 be2c83d4f1371cf13d2af261fde999f4 286 SUPERFAMILY SSF53850 39 281 4.16E-76 T 14-10-2018 llmg_2329 cf685e690a2f2a6244c0b90c400e7706 236 Pfam PF07722 Peptidase C26 3 215 1.3E-61 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 llmg_2329 cf685e690a2f2a6244c0b90c400e7706 236 SUPERFAMILY SSF52317 25 231 1.99E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_2329 cf685e690a2f2a6244c0b90c400e7706 236 Gene3D G3DSA:3.40.50.880 1 234 3.0E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_2471 a7c1b7571ca27df18669c40608fa9c53 102 Gene3D G3DSA:3.10.450.150 1 102 1.3E-30 T 14-10-2018 llmg_2471 a7c1b7571ca27df18669c40608fa9c53 102 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 9 101 6.3E-25 T 14-10-2018 IPR009303 Protein of unknown function DUF960 llmg_1749 0f923c140da91a6269ef254620f489d0 372 Pfam PF07907 YibE/F-like protein 121 359 3.1E-52 T 14-10-2018 IPR012507 YibE/F-like llmg_1749 0f923c140da91a6269ef254620f489d0 372 SUPERFAMILY SSF82866 97 216 1.12E-5 T 14-10-2018 llmg_1868 658bc1f9888108c335cb8c23c8e88805 85 SMART SM00530 28 83 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1868 658bc1f9888108c335cb8c23c8e88805 85 SUPERFAMILY SSF47413 25 84 7.51E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1868 658bc1f9888108c335cb8c23c8e88805 85 Pfam PF01381 Helix-turn-helix 29 83 5.9E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_1868 658bc1f9888108c335cb8c23c8e88805 85 Gene3D G3DSA:1.10.260.40 18 85 3.4E-21 T 14-10-2018 llmg_1110 9b7e68201a12dbe93937d61db0e3f6a5 319 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 85 99 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_1110 9b7e68201a12dbe93937d61db0e3f6a5 319 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 207 219 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site llmg_1110 9b7e68201a12dbe93937d61db0e3f6a5 319 Gene3D G3DSA:1.10.600.10 1 318 3.5E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_1110 9b7e68201a12dbe93937d61db0e3f6a5 319 Pfam PF00348 Polyprenyl synthetase 38 266 5.2E-58 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 llmg_1110 9b7e68201a12dbe93937d61db0e3f6a5 319 SUPERFAMILY SSF48576 5 318 5.92E-75 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily llmg_0027 3631127120f0f164381eabaa409b5172 126 SUPERFAMILY SSF88659 63 124 2.99E-5 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like llmg_0027 3631127120f0f164381eabaa409b5172 126 Gene3D G3DSA:1.10.10.10 50 125 2.8E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0092 bd9759f360182328a796f8a1407f287d 277 Gene3D G3DSA:3.40.50.720 2 265 6.9E-66 T 14-10-2018 llmg_0092 bd9759f360182328a796f8a1407f287d 277 Pfam PF00106 short chain dehydrogenase 4 180 4.3E-48 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.5E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.3E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0092 bd9759f360182328a796f8a1407f287d 277 SUPERFAMILY SSF51735 2 268 1.78E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0018 fe1d7019f84f1b8a8a1c362567a3124b 438 Pfam PF13354 Beta-lactamase enzyme family 222 416 1.9E-32 T 14-10-2018 llmg_0018 fe1d7019f84f1b8a8a1c362567a3124b 438 SUPERFAMILY SSF56601 154 435 1.64E-28 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_0018 fe1d7019f84f1b8a8a1c362567a3124b 438 Pfam PF13457 SH3-like domain 125 190 1.4E-4 T 14-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 llmg_0018 fe1d7019f84f1b8a8a1c362567a3124b 438 Gene3D G3DSA:3.40.710.10 197 438 3.2E-37 T 14-10-2018 llmg_2150 cb547df53a98c49cf65bb06da21aa609 124 Pfam PF12680 SnoaL-like domain 8 108 3.0E-9 T 14-10-2018 IPR037401 SnoaL-like domain llmg_2150 cb547df53a98c49cf65bb06da21aa609 124 Gene3D G3DSA:3.10.450.50 3 120 2.8E-14 T 14-10-2018 llmg_2150 cb547df53a98c49cf65bb06da21aa609 124 SUPERFAMILY SSF54427 2 112 2.54E-23 T 14-10-2018 IPR032710 NTF2-like domain superfamily llmg_1059 b3077276e97418b0f8b2db641375532f 198 Gene3D G3DSA:3.40.50.150 8 198 2.4E-47 T 14-10-2018 llmg_1059 b3077276e97418b0f8b2db641375532f 198 Pfam PF05175 Methyltransferase small domain 30 195 1.4E-48 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 llmg_1059 b3077276e97418b0f8b2db641375532f 198 SUPERFAMILY SSF53335 10 197 7.6E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1280 cdfb396b306749b95f06804615a22436 570 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 16 569 41.254 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 Pfam PF00920 Dehydratase family 46 566 3.8E-204 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 30 569 3.8E-214 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 SUPERFAMILY SSF143975 12 390 3.92E-131 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 477 488 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 Gene3D G3DSA:3.50.30.80 391 541 1.7E-50 T 14-10-2018 llmg_1280 cdfb396b306749b95f06804615a22436 570 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 135 145 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 llmg_1280 cdfb396b306749b95f06804615a22436 570 SUPERFAMILY SSF52016 392 569 3.3E-54 T 14-10-2018 llmg_1211 8d6eb48ba776b8e8f272686efc4d45b1 278 Pfam PF16069 Domain of unknown function (DUF4811) 26 209 1.8E-42 T 14-10-2018 IPR032083 Protein of unknown function DUF4811 llmg_0481 7ad3db82603d9b957ae3f78c4200e131 344 Gene3D G3DSA:3.90.70.10 196 334 3.1E-17 T 14-10-2018 llmg_0481 7ad3db82603d9b957ae3f78c4200e131 344 Pfam PF13529 Peptidase_C39 like family 179 308 3.6E-18 T 14-10-2018 IPR039564 Peptidase C39-like llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 PIRSF PIRSF001359 1 298 1.2E-112 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 298 2.2E-115 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 297 5.1E-91 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 298 2.4E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 SUPERFAMILY SSF51569 1 298 2.56E-92 T 14-10-2018 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 133 144 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 llmg_2167 3bf5d340a094c5eba1b786750683dba2 298 Gene3D G3DSA:3.20.20.70 1 298 1.1E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_0743 4d5ca113e35f8c25862c752e67c3be7c 524 Pfam PF00128 Alpha amylase, catalytic domain 65 378 3.8E-73 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0743 4d5ca113e35f8c25862c752e67c3be7c 524 Gene3D G3DSA:3.90.400.10 155 208 4.9E-122 T 14-10-2018 llmg_0743 4d5ca113e35f8c25862c752e67c3be7c 524 SUPERFAMILY SSF51445 48 445 4.77E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0743 4d5ca113e35f8c25862c752e67c3be7c 524 SMART SM00642 50 396 3.9E-102 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0743 4d5ca113e35f8c25862c752e67c3be7c 524 Gene3D G3DSA:3.20.20.80 48 440 4.9E-122 T 14-10-2018 llmg_1321 8155beb7bc0287d7937bea6cfc756f22 393 SUPERFAMILY SSF51445 3 385 2.01E-78 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1321 8155beb7bc0287d7937bea6cfc756f22 393 Gene3D G3DSA:3.20.20.80 1 393 1.7E-82 T 14-10-2018 llmg_1321 8155beb7bc0287d7937bea6cfc756f22 393 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 57 340 6.5E-12 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 llmg_1583 c1f55b73cca952c2426b258b9df7c4bb 313 Pfam PF01040 UbiA prenyltransferase family 20 287 6.8E-21 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 llmg_1905 191e7b04d9f0999478db6967d3262a47 187 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 173 6.5E-24 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain llmg_1905 191e7b04d9f0999478db6967d3262a47 187 SUPERFAMILY SSF52266 1 185 1.98E-36 T 14-10-2018 llmg_1905 191e7b04d9f0999478db6967d3262a47 187 Gene3D G3DSA:3.40.50.1110 1 185 3.1E-38 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_2139 eb777f3bb723ff8f665d341b08e5d838 165 Pfam PF01381 Helix-turn-helix 11 58 8.8E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2139 eb777f3bb723ff8f665d341b08e5d838 165 SUPERFAMILY SSF47413 2 62 7.6E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_2139 eb777f3bb723ff8f665d341b08e5d838 165 SMART SM00530 4 59 3.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2139 eb777f3bb723ff8f665d341b08e5d838 165 Gene3D G3DSA:1.10.260.40 1 61 6.9E-21 T 14-10-2018 llmg_1050 a89926b27d1dec1c2036a528302d64b7 56 Pfam PF11240 Protein of unknown function (DUF3042) 3 55 4.1E-19 T 14-10-2018 IPR021402 Protein of unknown function DUF3042 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 63 199 8.7E-24 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 SMART SM00047 43 204 6.3E-51 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 PRINTS PR01002 Flagellar protein FlgJ signature 161 180 2.8E-9 T 14-10-2018 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 PRINTS PR01002 Flagellar protein FlgJ signature 76 94 2.8E-9 T 14-10-2018 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 PRINTS PR01002 Flagellar protein FlgJ signature 181 199 2.8E-9 T 14-10-2018 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 Gene3D G3DSA:4.10.80.30 108 133 1.7E-48 T 14-10-2018 llmg_1087 7eb970066e537cafebf3b15356fcfde3 209 Gene3D G3DSA:1.10.530.10 57 204 1.7E-48 T 14-10-2018 llmg_2242 2f53d7839406eca4f8ef4aa29b4959cf 325 Gene3D G3DSA:3.40.50.720 32 319 1.6E-81 T 14-10-2018 llmg_2242 2f53d7839406eca4f8ef4aa29b4959cf 325 Gene3D G3DSA:3.40.50.720 97 289 1.6E-81 T 14-10-2018 llmg_2242 2f53d7839406eca4f8ef4aa29b4959cf 325 SUPERFAMILY SSF51735 100 279 4.91E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_2242 2f53d7839406eca4f8ef4aa29b4959cf 325 SUPERFAMILY SSF52283 11 121 5.1E-12 T 14-10-2018 llmg_2242 2f53d7839406eca4f8ef4aa29b4959cf 325 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 279 7.8E-49 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 llmg_1936 25f667afc3472596b884c63e338c3d5b 199 Pfam PF06335 Protein of unknown function (DUF1054) 2 193 2.1E-67 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 llmg_1936 25f667afc3472596b884c63e338c3d5b 199 Gene3D G3DSA:3.30.930.20 1 199 6.1E-70 T 14-10-2018 llmg_1936 25f667afc3472596b884c63e338c3d5b 199 PIRSF PIRSF021332 1 199 1.8E-78 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 llmg_1936 25f667afc3472596b884c63e338c3d5b 199 SUPERFAMILY SSF142913 1 198 2.48E-65 T 14-10-2018 llmg_1936 25f667afc3472596b884c63e338c3d5b 199 Hamap MF_01851 UPF0637 protein . 1 195 34.8 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 llmg_0866 6b1688dde12ec30e7698346ff3554a8c 99 Gene3D G3DSA:3.40.50.2300 1 92 7.6E-15 T 14-10-2018 llmg_0866 6b1688dde12ec30e7698346ff3554a8c 99 SUPERFAMILY SSF52794 1 93 3.56E-14 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_0866 6b1688dde12ec30e7698346ff3554a8c 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 81 1.2E-9 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 llmg_2336 d1be95bf30557b56fab91aca1e90de79 183 Pfam PF00583 Acetyltransferase (GNAT) family 34 161 1.0E-12 T 14-10-2018 IPR000182 GNAT domain llmg_2336 d1be95bf30557b56fab91aca1e90de79 183 SUPERFAMILY SSF55729 20 181 2.92E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2336 d1be95bf30557b56fab91aca1e90de79 183 Gene3D G3DSA:3.40.630.30 20 183 3.8E-37 T 14-10-2018 llmg_1226 73b7c93404a9639927ff727d9204da76 285 Pfam PF02219 Methylenetetrahydrofolate reductase 4 276 5.1E-68 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 llmg_1226 73b7c93404a9639927ff727d9204da76 285 SUPERFAMILY SSF51730 3 278 9.02E-74 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like llmg_1226 73b7c93404a9639927ff727d9204da76 285 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 8 277 2.0E-97 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 llmg_1226 73b7c93404a9639927ff727d9204da76 285 Gene3D G3DSA:3.20.20.220 1 283 2.5E-83 T 14-10-2018 llmg_2189 27e4351f2064ac6b9902991a29417717 57 Pfam PF01583 Adenylylsulphate kinase 1 48 1.5E-4 T 14-10-2018 llmg_2189 27e4351f2064ac6b9902991a29417717 57 SUPERFAMILY SSF52540 1 49 1.29E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2189 27e4351f2064ac6b9902991a29417717 57 Gene3D G3DSA:3.40.50.300 1 57 2.3E-17 T 14-10-2018 llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 Gene3D G3DSA:1.10.1040.10 179 312 4.4E-47 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 SUPERFAMILY SSF48179 179 306 3.06E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 307 1.7E-74 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 306 2.2E-27 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 Gene3D G3DSA:3.40.50.720 1 178 1.4E-60 T 14-10-2018 llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 SUPERFAMILY SSF51735 1 136 2.96E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1131 befa23f07b2f25e42bcf5ec423b6c490 312 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 1.5E-40 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain llmg_0185 9237459688e3159c61be63a64e2d1d37 350 Gene3D G3DSA:3.40.630.30 127 285 9.6E-37 T 14-10-2018 llmg_0185 9237459688e3159c61be63a64e2d1d37 350 SUPERFAMILY SSF55729 4 291 5.29E-51 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0185 9237459688e3159c61be63a64e2d1d37 350 Pfam PF13530 Sterol carrier protein domain 184 320 1.3E-26 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain llmg_0185 9237459688e3159c61be63a64e2d1d37 350 Pfam PF13527 Acetyltransferase (GNAT) domain 4 123 1.7E-26 T 14-10-2018 llmg_0185 9237459688e3159c61be63a64e2d1d37 350 Gene3D G3DSA:3.40.630.30 1 126 3.0E-34 T 14-10-2018 llmg_1843 c35ab0b69ce4c2af4c6676cd95b72bcd 155 Gene3D G3DSA:3.40.140.10 1 155 2.2E-62 T 14-10-2018 llmg_1843 c35ab0b69ce4c2af4c6676cd95b72bcd 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 llmg_1843 c35ab0b69ce4c2af4c6676cd95b72bcd 155 Pfam PF14437 MafB19-like deaminase 7 153 8.0E-35 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 llmg_1843 c35ab0b69ce4c2af4c6676cd95b72bcd 155 SUPERFAMILY SSF53927 6 154 3.51E-48 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 llmg_1843 c35ab0b69ce4c2af4c6676cd95b72bcd 155 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 42.881 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 llmg_1810 961b9fbb9fd046d472b1a321a417f6b4 148 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 148 78.721 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 llmg_1810 961b9fbb9fd046d472b1a321a417f6b4 148 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 143 1.5E-53 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 llmg_1810 961b9fbb9fd046d472b1a321a417f6b4 148 Pfam PF03477 ATP cone domain 48 134 6.4E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 llmg_2421 1495a6396e5856e929b3a3eaa7c3762c 446 SUPERFAMILY SSF53756 1 346 1.99E-70 T 14-10-2018 llmg_2421 1495a6396e5856e929b3a3eaa7c3762c 446 Pfam PF13439 Glycosyltransferase Family 4 15 183 8.8E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 llmg_2421 1495a6396e5856e929b3a3eaa7c3762c 446 Gene3D G3DSA:3.40.50.2000 204 369 8.5E-32 T 14-10-2018 llmg_2421 1495a6396e5856e929b3a3eaa7c3762c 446 Gene3D G3DSA:3.40.50.2000 1 203 1.8E-38 T 14-10-2018 llmg_2421 1495a6396e5856e929b3a3eaa7c3762c 446 Pfam PF00534 Glycosyl transferases group 1 196 343 4.5E-30 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 llmg_0464 9d16175fb5264932ff5395acacbc18a4 166 Pfam PF07155 ECF-type riboflavin transporter, S component 8 153 5.1E-25 T 14-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 llmg_0464 9d16175fb5264932ff5395acacbc18a4 166 Gene3D G3DSA:1.10.1760.20 4 158 1.6E-32 T 14-10-2018 llmg_0123 85e71c684cc35b5a412a798e9e8f2b17 214 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 214 24.509 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 llmg_0123 85e71c684cc35b5a412a798e9e8f2b17 214 Gene3D G3DSA:3.40.50.360 1 214 1.4E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_0123 85e71c684cc35b5a412a798e9e8f2b17 214 Pfam PF02525 Flavodoxin-like fold 3 203 2.4E-33 T 14-10-2018 IPR003680 Flavodoxin-like fold llmg_0123 85e71c684cc35b5a412a798e9e8f2b17 214 SUPERFAMILY SSF52218 1 212 3.84E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 PRINTS PR01438 Universal stress protein signature 104 116 4.5E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 PRINTS PR01438 Universal stress protein signature 5 23 4.5E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 PRINTS PR01438 Universal stress protein signature 122 144 4.5E-19 T 14-10-2018 IPR006015 Universal stress protein A llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 Gene3D G3DSA:3.40.50.620 1 145 1.9E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 Pfam PF00582 Universal stress protein family 5 144 5.1E-36 T 14-10-2018 IPR006016 UspA llmg_2023 194599a48f8f60fbb23f6e45fa15506b 145 SUPERFAMILY SSF52402 5 144 1.26E-31 T 14-10-2018 llmg_2268 3a931673a3edfc2de9570463a0e4b539 393 Gene3D G3DSA:1.10.443.10 191 391 1.7E-45 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_2268 3a931673a3edfc2de9570463a0e4b539 393 Pfam PF00589 Phage integrase family 191 376 2.5E-28 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_2268 3a931673a3edfc2de9570463a0e4b539 393 SUPERFAMILY SSF56349 71 384 4.41E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_2268 3a931673a3edfc2de9570463a0e4b539 393 Gene3D G3DSA:1.10.150.130 69 190 7.7E-17 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_2268 3a931673a3edfc2de9570463a0e4b539 393 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 71 126 2.3E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 llmg_0120 c38930d4f416d0853f61b5a7c332eeb9 172 Pfam PF01047 MarR family 55 106 3.2E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0120 c38930d4f416d0853f61b5a7c332eeb9 172 Gene3D G3DSA:1.10.10.10 9 159 9.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0120 c38930d4f416d0853f61b5a7c332eeb9 172 SMART SM00347 43 145 6.7E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_0120 c38930d4f416d0853f61b5a7c332eeb9 172 SUPERFAMILY SSF46785 41 155 2.9E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1585 a90fa9d0cdd104dd5e4affca28e2d583 195 Gene3D G3DSA:3.40.50.850 1 188 1.9E-38 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_1585 a90fa9d0cdd104dd5e4affca28e2d583 195 Pfam PF00857 Isochorismatase family 9 185 6.5E-32 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 llmg_1585 a90fa9d0cdd104dd5e4affca28e2d583 195 SUPERFAMILY SSF52499 3 191 1.06E-41 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 Gene3D G3DSA:1.20.58.90 239 289 6.3E-71 T 14-10-2018 llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 Gene3D G3DSA:3.40.630.30 119 371 6.3E-71 T 14-10-2018 llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 Gene3D G3DSA:3.40.630.30 21 382 6.3E-71 T 14-10-2018 llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 SUPERFAMILY SSF55729 10 173 2.49E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 SUPERFAMILY SSF55729 165 386 8.12E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2352 fc2ca928cf71f63eed80b569772073cd 396 Pfam PF02388 FemAB family 18 390 1.1E-77 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 llmg_0310 7d486afd53f0dc13f59066ea7e73b45b 66 Gene3D G3DSA:3.30.1490.390 5 66 8.6E-7 T 14-10-2018 llmg_0310 7d486afd53f0dc13f59066ea7e73b45b 66 Pfam PF15507 Domain of unknown function (DUF4649) 16 66 1.5E-7 T 14-10-2018 IPR027879 Protein of unknown function DUF4649 llmg_1371 95cfaaf5028fbad47695f5236ef8b81e 599 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 90 360 2.6E-36 T 14-10-2018 IPR000477 Reverse transcriptase domain llmg_1371 95cfaaf5028fbad47695f5236ef8b81e 599 SUPERFAMILY SSF56672 16 382 9.53E-47 T 14-10-2018 llmg_1371 95cfaaf5028fbad47695f5236ef8b81e 599 Pfam PF01348 Type II intron maturase 388 482 1.3E-14 T 14-10-2018 IPR024937 Domain X GO:0006397 llmg_1263 61d0dbf198e9f8f77b5d34354e4c7e2d 124 Pfam PF03780 Asp23 family, cell envelope-related function 12 75 1.7E-17 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 llmg_0962 e46a6c448a323ce290258c6270474109 386 Gene3D G3DSA:1.10.10.60 273 323 8.8E-15 T 14-10-2018 llmg_0962 e46a6c448a323ce290258c6270474109 386 Gene3D G3DSA:1.10.10.60 324 377 4.6E-15 T 14-10-2018 llmg_0962 e46a6c448a323ce290258c6270474109 386 SUPERFAMILY SSF46689 275 324 2.15E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0962 e46a6c448a323ce290258c6270474109 386 SUPERFAMILY SSF46689 327 378 1.48E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0962 e46a6c448a323ce290258c6270474109 386 Pfam PF12833 Helix-turn-helix domain 296 373 1.0E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_0962 e46a6c448a323ce290258c6270474109 386 SMART SM00342 290 373 3.3E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 llmg_0204 a2ef377db83c0ba5c842f3d04fb196c1 64 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 64 16.383 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0204 a2ef377db83c0ba5c842f3d04fb196c1 64 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 55 3.6E-19 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 llmg_0204 a2ef377db83c0ba5c842f3d04fb196c1 64 Pfam PF00830 Ribosomal L28 family 3 56 2.0E-16 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0204 a2ef377db83c0ba5c842f3d04fb196c1 64 SUPERFAMILY SSF143800 1 57 7.46E-20 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0204 a2ef377db83c0ba5c842f3d04fb196c1 64 Gene3D G3DSA:2.30.170.40 2 64 2.5E-15 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 ProSitePatterns PS00221 MIP family signature. 66 74 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 85 104 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 6 25 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 140 158 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 217 237 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 170 192 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 PRINTS PR00783 Major intrinsic protein family signature 48 72 3.0E-42 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 TIGRFAM TIGR00861 MIP: MIP family channel proteins 10 234 7.6E-55 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 Gene3D G3DSA:1.20.1080.10 1 241 6.2E-76 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 Pfam PF00230 Major intrinsic protein 7 234 2.4E-44 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1097 b03cb9569eed62a518f7b4cbcc69d0ef 242 SUPERFAMILY SSF81338 5 236 6.54E-70 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 Gene3D G3DSA:3.90.226.10 32 287 8.9E-84 T 14-10-2018 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 284 39.873 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 285 7.1E-112 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 SUPERFAMILY SSF52096 32 283 4.97E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 2.7E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 2.7E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 2.7E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 2.7E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 2.7E-37 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 llmg_1778 a119cfe27d5b02546fdc704f3acdc533 288 Pfam PF01039 Carboxyl transferase domain 64 241 1.4E-17 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 llmg_2232 2dcebc64fe9e9252751756aafe00d272 321 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 67 319 8.2E-77 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like llmg_2232 2dcebc64fe9e9252751756aafe00d272 321 SUPERFAMILY SSF53474 154 318 2.21E-8 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_2232 2dcebc64fe9e9252751756aafe00d272 321 Gene3D G3DSA:3.40.50.1820 76 320 4.2E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1584 23bd1d03be7a066525209f4d21cb237e 352 Gene3D G3DSA:3.60.10.10 56 349 1.8E-30 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily llmg_1584 23bd1d03be7a066525209f4d21cb237e 352 SUPERFAMILY SSF56219 58 350 3.01E-25 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily llmg_2224 9eaf3814bcffaf8df9d3a8a2fd5bef70 190 Gene3D G3DSA:1.20.120.1760 2 185 7.6E-12 T 14-10-2018 llmg_2224 9eaf3814bcffaf8df9d3a8a2fd5bef70 190 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 185 5.5E-52 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 llmg_2224 9eaf3814bcffaf8df9d3a8a2fd5bef70 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 84 5.9E-19 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 llmg_2224 9eaf3814bcffaf8df9d3a8a2fd5bef70 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 62 84 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 llmg_2224 9eaf3814bcffaf8df9d3a8a2fd5bef70 190 PIRSF PIRSF000847 1 190 4.9E-51 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 llmg_0524 957d7832ac0bbb5b6ef0c0fe96ad3e97 200 Pfam PF13240 zinc-ribbon domain 7 28 1.2E-9 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 SUPERFAMILY SSF57840 1 38 1.18E-17 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 38 3.0E-10 T 14-10-2018 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 8.6E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 Pfam PF00444 Ribosomal protein L36 1 38 6.2E-22 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_2357 f963e06024c88d1f5d03cce62cab759d 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 18.368 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 Gene3D G3DSA:3.20.140.10 12 471 2.0E-203 T 14-10-2018 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 SUPERFAMILY SSF54675 6 139 8.63E-49 T 14-10-2018 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 Gene3D G3DSA:3.20.20.70 152 319 2.0E-203 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 PIRSF PIRSF000484 4 481 1.2E-150 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 157 336 5.4E-10 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 SUPERFAMILY SSF51690 140 480 3.68E-130 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 llmg_1472 698bb619627af6012c4d9bdf3c34fd8d 490 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 467 2.4E-185 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 llmg_0152 6bfbef932e83bdb0072a0fff6ef77bf9 107 Pfam PF06949 Protein of unknown function (DUF1292) 23 103 2.0E-14 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 llmg_0152 6bfbef932e83bdb0072a0fff6ef77bf9 107 Hamap MF_01448 UPF0473 protein . 14 104 20.33 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 llmg_0216 56a1b08c0ee2f13adec4880644ce3932 318 SUPERFAMILY SSF53448 4 225 3.38E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0216 56a1b08c0ee2f13adec4880644ce3932 318 Gene3D G3DSA:3.90.550.10 1 243 4.8E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0216 56a1b08c0ee2f13adec4880644ce3932 318 Pfam PF00535 Glycosyl transferase family 2 6 147 1.0E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0440 cbf555896f51b39b4b3091786905aa41 445 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 436 6.9E-109 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 llmg_0440 cbf555896f51b39b4b3091786905aa41 445 PIRSF PIRSF006351 1 445 2.4E-131 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 llmg_0440 cbf555896f51b39b4b3091786905aa41 445 Pfam PF02378 Phosphotransferase system, EIIC 27 362 1.0E-59 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_2262 bce91ab82a22afd5c1274750ef937e58 180 Gene3D G3DSA:1.10.260.40 1 70 3.8E-18 T 14-10-2018 llmg_2262 bce91ab82a22afd5c1274750ef937e58 180 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 1.2E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2262 bce91ab82a22afd5c1274750ef937e58 180 SMART SM00530 5 61 9.5E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2262 bce91ab82a22afd5c1274750ef937e58 180 SUPERFAMILY SSF47413 1 66 9.01E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1959 38b3e0a9e69d8f50360915a1c75cf0e5 186 Gene3D G3DSA:3.40.630.30 1 170 1.0E-50 T 14-10-2018 llmg_1959 38b3e0a9e69d8f50360915a1c75cf0e5 186 Pfam PF13420 Acetyltransferase (GNAT) domain 4 156 2.9E-37 T 14-10-2018 llmg_1959 38b3e0a9e69d8f50360915a1c75cf0e5 186 SUPERFAMILY SSF55729 1 161 3.26E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1984 764a4be485ad65df12252d3571a1dd45 224 Gene3D G3DSA:1.10.260.40 1 101 7.8E-9 T 14-10-2018 llmg_1984 764a4be485ad65df12252d3571a1dd45 224 SUPERFAMILY SSF47413 2 64 7.19E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1968 c63d1fb94dcd655739fe1616f9ccd41f 96 Pfam PF06013 Proteins of 100 residues with WXG 4 87 5.4E-18 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like llmg_1968 c63d1fb94dcd655739fe1616f9ccd41f 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 4 92 3.7E-21 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like llmg_1968 c63d1fb94dcd655739fe1616f9ccd41f 96 Gene3D G3DSA:1.10.287.1060 1 95 1.1E-22 T 14-10-2018 llmg_1968 c63d1fb94dcd655739fe1616f9ccd41f 96 SUPERFAMILY SSF140453 3 95 6.02E-20 T 14-10-2018 IPR036689 ESAT-6-like superfamily llmg_1417 704ecddc4a5b2f611f8c21b0518b7bb7 271 Pfam PF01183 Glycosyl hydrolases family 25 65 247 4.2E-17 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 llmg_1417 704ecddc4a5b2f611f8c21b0518b7bb7 271 Gene3D G3DSA:3.20.20.80 49 271 5.0E-73 T 14-10-2018 llmg_1417 704ecddc4a5b2f611f8c21b0518b7bb7 271 SUPERFAMILY SSF51445 64 260 1.47E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_2049 47c1c6005ea115201a952c9fc1814778 114 SUPERFAMILY SSF160800 1 111 3.53E-39 T 14-10-2018 IPR035942 Lp2179-like superfamily llmg_2049 47c1c6005ea115201a952c9fc1814778 114 Gene3D G3DSA:3.30.1820.10 1 112 4.2E-36 T 14-10-2018 IPR035942 Lp2179-like superfamily llmg_2049 47c1c6005ea115201a952c9fc1814778 114 Pfam PF08866 Putative amino acid metabolism 1 110 4.8E-41 T 14-10-2018 IPR014965 Putative amino acid metabolism llmg_2509 f74959b6f16b12cb6ba9cf09947e42e3 291 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 8 286 1.7E-39 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 llmg_2509 f74959b6f16b12cb6ba9cf09947e42e3 291 Gene3D G3DSA:2.40.10.340 114 188 7.6E-25 T 14-10-2018 llmg_2509 f74959b6f16b12cb6ba9cf09947e42e3 291 Gene3D G3DSA:2.40.10.350 189 272 4.8E-22 T 14-10-2018 llmg_2509 f74959b6f16b12cb6ba9cf09947e42e3 291 PIRSF PIRSF038471 2 291 1.6E-55 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 llmg_2509 f74959b6f16b12cb6ba9cf09947e42e3 291 Pfam PF04085 rod shape-determining protein MreC 126 285 4.7E-36 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 llmg_2393 11671cf296f3856d023487c43c084a3e 211 Gene3D G3DSA:3.30.240.20 156 211 1.4E-10 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily llmg_2393 11671cf296f3856d023487c43c084a3e 211 Pfam PF04239 Protein of unknown function (DUF421) 89 190 4.7E-30 T 14-10-2018 IPR007353 Protein of unknown function DUF421 llmg_2393 11671cf296f3856d023487c43c084a3e 211 Gene3D G3DSA:3.30.240.20 81 150 1.2E-16 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily llmg_0920 e1d2bffae7239bf441c0f4af1bfaac3c 263 Pfam PF13731 WxL domain surface cell wall-binding 33 261 3.3E-53 T 14-10-2018 IPR027994 WxL domain llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 Gene3D G3DSA:3.40.50.720 2 245 8.2E-69 T 14-10-2018 llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 SUPERFAMILY SSF51735 2 235 7.04E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 4.3E-4 T 14-10-2018 llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.2E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.2E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.2E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.2E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.2E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 Pfam PF00106 short chain dehydrogenase 8 203 1.2E-57 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0968 c25687a9d989b526bbf6ea024b82deb7 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 llmg_0005 ec6cb25fd85b3a4e79f3c88474b95f37 66 Pfam PF06107 Bacterial protein of unknown function (DUF951) 4 64 1.2E-27 T 14-10-2018 IPR009296 Protein of unknown function DUF951 llmg_0005 ec6cb25fd85b3a4e79f3c88474b95f37 66 PIRSF PIRSF037263 1 66 4.7E-30 T 14-10-2018 IPR009296 Protein of unknown function DUF951 llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 Gene3D G3DSA:3.40.50.300 1 246 6.1E-65 T 14-10-2018 llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 SMART SM00382 27 223 4.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 Pfam PF00005 ABC transporter 18 173 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 SUPERFAMILY SSF52540 1 239 9.27E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 5.7E-103 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 llmg_0313 8727f4a85e60addfb70e926a37e3f3da 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1675 810bc510eb2f8f7c01be619600fb6d7a 220 Gene3D G3DSA:3.40.50.300 1 219 4.2E-58 T 14-10-2018 llmg_1675 810bc510eb2f8f7c01be619600fb6d7a 220 SUPERFAMILY SSF52540 3 215 7.28E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1675 810bc510eb2f8f7c01be619600fb6d7a 220 SMART SM00382 29 214 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1675 810bc510eb2f8f7c01be619600fb6d7a 220 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1675 810bc510eb2f8f7c01be619600fb6d7a 220 Pfam PF00005 ABC transporter 21 166 8.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0583 c6649f4b8c226e6f8eb6a676350e2475 261 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 258 1.0E-63 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 llmg_0583 c6649f4b8c226e6f8eb6a676350e2475 261 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 138 150 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 llmg_0583 c6649f4b8c226e6f8eb6a676350e2475 261 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 255 3.7E-71 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 llmg_0583 c6649f4b8c226e6f8eb6a676350e2475 261 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 260 16.759 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 llmg_0207 01b2bc26b37022a5f49799847a4fbfbe 197 SUPERFAMILY SSF51182 16 192 8.3E-52 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily llmg_0207 01b2bc26b37022a5f49799847a4fbfbe 197 Gene3D G3DSA:2.60.120.10 1 197 5.2E-64 T 14-10-2018 IPR014710 RmlC-like jelly roll fold llmg_0207 01b2bc26b37022a5f49799847a4fbfbe 197 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 17 188 3.5E-40 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 llmg_0207 01b2bc26b37022a5f49799847a4fbfbe 197 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 11 192 9.0E-103 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 llmg_2052 1689c15072589d71505d32f8d4de7d60 38 Pfam PF13253 Protein of unknown function (DUF4044) 4 36 4.0E-13 T 14-10-2018 IPR025270 Protein of unknown function DUF4044 llmg_0450 c37a0a072be9ee34cd674e792ad27a48 217 Gene3D G3DSA:2.170.120.30 1 43 7.2E-7 T 14-10-2018 llmg_0450 c37a0a072be9ee34cd674e792ad27a48 217 Pfam PF07949 YbbR-like protein 49 117 1.8E-10 T 14-10-2018 IPR012505 YbbR-like llmg_0450 c37a0a072be9ee34cd674e792ad27a48 217 Pfam PF07949 YbbR-like protein 134 210 7.8E-10 T 14-10-2018 IPR012505 YbbR-like llmg_0450 c37a0a072be9ee34cd674e792ad27a48 217 Gene3D G3DSA:2.170.120.40 130 212 5.7E-20 T 14-10-2018 llmg_0714 ff734ccd1ba387939a45dcdd78d6d5d7 279 Gene3D G3DSA:3.30.420.10 112 271 1.4E-22 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_0714 ff734ccd1ba387939a45dcdd78d6d5d7 279 Pfam PF13276 HTH-like domain 46 96 3.9E-12 T 14-10-2018 IPR025948 HTH-like domain llmg_0714 ff734ccd1ba387939a45dcdd78d6d5d7 279 Pfam PF00665 Integrase core domain 118 233 9.8E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_0714 ff734ccd1ba387939a45dcdd78d6d5d7 279 SUPERFAMILY SSF53098 115 277 1.52E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 171 5.0E-29 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Gene3D G3DSA:3.40.50.970 364 553 5.5E-56 T 14-10-2018 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 PIRSF PIRSF004983 1 554 1.6E-187 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Gene3D G3DSA:3.40.50.1220 196 362 1.2E-41 T 14-10-2018 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 SUPERFAMILY SSF52518 9 176 3.19E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 SUPERFAMILY SSF52467 163 356 1.56E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 5 430 2.2E-139 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 SUPERFAMILY SSF52518 369 552 3.77E-26 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 423 535 8.5E-8 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 553 33.181 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Gene3D G3DSA:3.40.50.970 1 170 2.9E-59 T 14-10-2018 llmg_1829 7c31a452a008b2fd602babb9cbf03a9e 554 Pfam PF16582 Middle domain of thiamine pyrophosphate 209 378 8.5E-14 T 14-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 llmg_0737 dd0ba9126575af454199c1e96fcb4255 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 278 5.5E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0737 dd0ba9126575af454199c1e96fcb4255 288 SUPERFAMILY SSF161098 7 288 3.01E-61 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0737 dd0ba9126575af454199c1e96fcb4255 288 Gene3D G3DSA:1.10.3720.10 2 275 1.0E-59 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0008 1595aa154cbc793ba15f2637ed4b8c23 107 Pfam PF01381 Helix-turn-helix 7 61 7.2E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0008 1595aa154cbc793ba15f2637ed4b8c23 107 Gene3D G3DSA:1.10.260.40 1 65 2.7E-23 T 14-10-2018 llmg_0008 1595aa154cbc793ba15f2637ed4b8c23 107 SMART SM00530 6 61 5.0E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0008 1595aa154cbc793ba15f2637ed4b8c23 107 SUPERFAMILY SSF47413 1 68 8.45E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1299 70baabb2c61a37a9f43f6e2171594d8f 204 Pfam PF06966 Protein of unknown function (DUF1295) 2 191 4.4E-75 T 14-10-2018 IPR010721 Protein of unknown function DUF1295 llmg_1299 70baabb2c61a37a9f43f6e2171594d8f 204 Gene3D G3DSA:1.20.120.1630 2 199 9.0E-16 T 14-10-2018 llmg_1267 69981bcaa90cc6f948f0779b66f9097b 115 Pfam PF01544 CorA-like Mg2+ transporter protein 16 106 4.2E-18 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 llmg_1267 69981bcaa90cc6f948f0779b66f9097b 115 Gene3D G3DSA:1.20.58.340 36 108 6.5E-9 T 14-10-2018 llmg_1267 69981bcaa90cc6f948f0779b66f9097b 115 SUPERFAMILY SSF144083 48 106 1.44E-12 T 14-10-2018 llmg_1464 9a2c94cce714259723d2fe8b90cdeea0 221 PIRSF PIRSF001332 1 221 2.4E-74 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 llmg_1464 9a2c94cce714259723d2fe8b90cdeea0 221 Pfam PF03306 Alpha-acetolactate decarboxylase 5 219 7.6E-59 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 llmg_1464 9a2c94cce714259723d2fe8b90cdeea0 221 Gene3D G3DSA:3.30.1330.80 5 218 4.6E-55 T 14-10-2018 llmg_1464 9a2c94cce714259723d2fe8b90cdeea0 221 Gene3D G3DSA:3.30.1330.80 79 200 4.6E-55 T 14-10-2018 llmg_1464 9a2c94cce714259723d2fe8b90cdeea0 221 SUPERFAMILY SSF117856 4 218 1.99E-56 T 14-10-2018 llmg_0584 46e6f03a0d0ae73329caac9e44cbcdac 139 Pfam PF06103 Bacterial protein of unknown function (DUF948) 4 91 1.9E-29 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 llmg_1950 3c0a1c0a725b2a005ec29ddd7b98be50 168 Pfam PF00430 ATP synthase B/B' CF(0) 17 146 1.2E-30 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 llmg_1950 3c0a1c0a725b2a005ec29ddd7b98be50 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 22 166 1.2E-36 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 llmg_1950 3c0a1c0a725b2a005ec29ddd7b98be50 168 SUPERFAMILY SSF81573 73 131 5.75E-7 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily llmg_1950 3c0a1c0a725b2a005ec29ddd7b98be50 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 9 148 12.275 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 llmg_1313 d7030436611496c008e1f7d7f39b468b 206 Gene3D G3DSA:3.40.50.150 3 200 1.2E-40 T 14-10-2018 llmg_1313 d7030436611496c008e1f7d7f39b468b 206 SUPERFAMILY SSF53335 6 191 1.17E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1313 d7030436611496c008e1f7d7f39b468b 206 Pfam PF13847 Methyltransferase domain 46 165 5.5E-21 T 14-10-2018 IPR025714 Methyltransferase domain llmg_1635 1648b80fd98b76ff6173576aea75bdaa 254 Gene3D G3DSA:3.40.50.300 1 242 4.1E-62 T 14-10-2018 llmg_1635 1648b80fd98b76ff6173576aea75bdaa 254 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1635 1648b80fd98b76ff6173576aea75bdaa 254 SUPERFAMILY SSF52540 1 223 7.42E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1635 1648b80fd98b76ff6173576aea75bdaa 254 SMART SM00382 26 208 2.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1635 1648b80fd98b76ff6173576aea75bdaa 254 Pfam PF00005 ABC transporter 17 160 8.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2497 5130d7a4be1d35fb82115a827f2b17dd 283 Pfam PF01925 Sulfite exporter TauE/SafE 11 274 5.2E-54 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 PIRSF PIRSF037785 36 213 1.0E-76 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 TIGRFAM TIGR00648 recU: recombination protein U 44 209 7.8E-62 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 Gene3D G3DSA:3.40.1350.10 45 212 4.6E-62 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 213 92.653 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 Pfam PF03838 Recombination protein U 44 207 4.6E-65 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 llmg_0512 a739200f65ae38e3282a5e92f069c736 213 SUPERFAMILY SSF52980 46 210 8.58E-63 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 llmg_0718 f1e2cb69062a9b87652c66355b24ed14 217 Gene3D G3DSA:3.40.50.720 3 216 3.9E-43 T 14-10-2018 llmg_0718 f1e2cb69062a9b87652c66355b24ed14 217 SUPERFAMILY SSF69572 8 204 3.79E-39 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 llmg_0718 f1e2cb69062a9b87652c66355b24ed14 217 Pfam PF00899 ThiF family 6 153 3.1E-33 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 llmg_1474 0c8247351197903e438aa7951d9ef351 403 SUPERFAMILY SSF81340 9 395 7.46E-69 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 llmg_1474 0c8247351197903e438aa7951d9ef351 403 Pfam PF00654 Voltage gated chloride channel 58 385 1.2E-59 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_1474 0c8247351197903e438aa7951d9ef351 403 PRINTS PR00762 Chloride channel signature 149 168 2.1E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_1474 0c8247351197903e438aa7951d9ef351 403 PRINTS PR00762 Chloride channel signature 312 332 2.1E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_1474 0c8247351197903e438aa7951d9ef351 403 PRINTS PR00762 Chloride channel signature 99 118 2.1E-6 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 llmg_1474 0c8247351197903e438aa7951d9ef351 403 Gene3D G3DSA:1.10.3080.10 5 401 4.5E-49 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 llmg_0726 4f4cbfd71700f0be22edac6327edae7d 127 Pfam PF06115 Domain of unknown function (DUF956) 2 121 1.4E-43 T 14-10-2018 IPR010360 Protein of unknown function DUF956 llmg_0726 4f4cbfd71700f0be22edac6327edae7d 127 PIRSF PIRSF021265 1 127 3.4E-50 T 14-10-2018 IPR010360 Protein of unknown function DUF956 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 344 3.6E-107 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 SUPERFAMILY SSF55681 95 344 1.46E-78 T 14-10-2018 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 344 46.202 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 SUPERFAMILY SSF46589 16 101 3.24E-18 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 90 2.5E-20 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 Pfam PF01409 tRNA synthetases class II core domain (F) 95 344 8.4E-107 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 llmg_2196 a08e45969408452a42ee2c2c665cd118 345 Gene3D G3DSA:3.30.930.10 11 345 6.6E-122 T 14-10-2018 llmg_0332 90755350d38517416e1a38343698d58b 182 Pfam PF02632 BioY family 30 168 5.0E-32 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 llmg_0332 90755350d38517416e1a38343698d58b 182 Gene3D G3DSA:1.10.1760.20 1 179 7.4E-44 T 14-10-2018 llmg_0332 90755350d38517416e1a38343698d58b 182 PIRSF PIRSF016661 1 179 1.6E-40 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 llmg_0628 ebcc003f456eaeec835f5e9cfe588b96 305 SUPERFAMILY SSF144083 241 302 7.72E-13 T 14-10-2018 llmg_0628 ebcc003f456eaeec835f5e9cfe588b96 305 SUPERFAMILY SSF143865 25 240 6.67E-14 T 14-10-2018 llmg_0628 ebcc003f456eaeec835f5e9cfe588b96 305 Gene3D G3DSA:1.20.58.340 249 305 1.9E-6 T 14-10-2018 llmg_0628 ebcc003f456eaeec835f5e9cfe588b96 305 Gene3D G3DSA:1.20.58.340 122 247 5.0E-10 T 14-10-2018 llmg_0628 ebcc003f456eaeec835f5e9cfe588b96 305 Pfam PF01544 CorA-like Mg2+ transporter protein 27 301 1.7E-53 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 llmg_2279 ba9d82213dfcfbb9a3bd03af0864758b 292 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2279 ba9d82213dfcfbb9a3bd03af0864758b 292 Pfam PF00005 ABC transporter 24 158 2.4E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2279 ba9d82213dfcfbb9a3bd03af0864758b 292 Gene3D G3DSA:3.40.50.300 1 256 3.8E-43 T 14-10-2018 llmg_2279 ba9d82213dfcfbb9a3bd03af0864758b 292 SMART SM00382 27 206 1.6E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2279 ba9d82213dfcfbb9a3bd03af0864758b 292 SUPERFAMILY SSF52540 3 215 9.4E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0925 1004e5069fda2b59faa01717931e6da4 103 Pfam PF01381 Helix-turn-helix 23 64 7.2E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0925 1004e5069fda2b59faa01717931e6da4 103 Gene3D G3DSA:1.10.260.40 9 97 2.5E-8 T 14-10-2018 llmg_0925 1004e5069fda2b59faa01717931e6da4 103 SMART SM00530 10 64 0.0061 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0925 1004e5069fda2b59faa01717931e6da4 103 SUPERFAMILY SSF47413 6 70 1.78E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1769 2c340b7672598fdc302e83c10102a8bc 84 Pfam PF02583 Metal-sensitive transcriptional repressor 5 81 9.5E-22 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 llmg_1769 2c340b7672598fdc302e83c10102a8bc 84 Gene3D G3DSA:1.20.58.1000 2 83 3.7E-20 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily llmg_1479 a52c09f9fda9d68a406ca00628935e31 255 SUPERFAMILY SSF56300 1 249 1.52E-39 T 14-10-2018 llmg_1479 a52c09f9fda9d68a406ca00628935e31 255 Gene3D G3DSA:3.60.21.10 1 254 5.0E-44 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_0581 4d15eba1f1a4e136cfd7ef7065e023ce 58 Pfam PF11676 Protein of unknown function (DUF3272) 3 56 2.9E-7 T 14-10-2018 IPR021690 Protein of unknown function DUF3272 llmg_1658 24fb2940e846ac2caa4d73d49a74ad58 110 SUPERFAMILY SSF117916 13 108 2.19E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily llmg_1658 24fb2940e846ac2caa4d73d49a74ad58 110 Pfam PF01883 Iron-sulfur cluster assembly protein 14 86 1.1E-22 T 14-10-2018 IPR002744 MIP18 family-like llmg_1658 24fb2940e846ac2caa4d73d49a74ad58 110 Gene3D G3DSA:3.30.300.130 6 110 2.2E-35 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily llmg_1928 6bd6107481ab559eab480f314c9e8834 291 SUPERFAMILY SSF47384 75 149 7.65E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 llmg_1928 6bd6107481ab559eab480f314c9e8834 291 SMART SM00387 188 291 6.4E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1928 6bd6107481ab559eab480f314c9e8834 291 SUPERFAMILY SSF55874 148 288 1.31E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1928 6bd6107481ab559eab480f314c9e8834 291 Gene3D G3DSA:3.30.565.10 152 290 3.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily llmg_1928 6bd6107481ab559eab480f314c9e8834 291 Gene3D G3DSA:1.10.287.130 57 151 1.1E-5 T 14-10-2018 llmg_1928 6bd6107481ab559eab480f314c9e8834 291 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 189 288 3.4E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 194 295 2.5E-13 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 98 4.0E-13 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 SMART SM01003 4 129 4.2E-10 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 Gene3D G3DSA:3.40.50.720 180 280 3.2E-12 T 14-10-2018 llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 SMART SM01002 153 272 5.3E-4 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 Gene3D G3DSA:3.40.50.720 2 118 3.4E-17 T 14-10-2018 llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 SUPERFAMILY SSF52283 1 179 2.89E-32 T 14-10-2018 llmg_1237 96a2ff1de31fcf0ee303c677936814db 312 SUPERFAMILY SSF51735 163 278 4.88E-9 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1132 37ac88f83da33e6b12e878fbf882c0ab 390 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 8.8E-47 T 14-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 llmg_1132 37ac88f83da33e6b12e878fbf882c0ab 390 Gene3D G3DSA:3.60.21.10 1 271 1.4E-65 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_1132 37ac88f83da33e6b12e878fbf882c0ab 390 Pfam PF00149 Calcineurin-like phosphoesterase 1 224 4.8E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_1132 37ac88f83da33e6b12e878fbf882c0ab 390 SUPERFAMILY SSF56300 1 331 5.47E-50 T 14-10-2018 llmg_0108 e41e433ec438518f78e88944a45dcb4c 230 SUPERFAMILY SSF53335 4 184 8.67E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0108 e41e433ec438518f78e88944a45dcb4c 230 Gene3D G3DSA:3.40.50.150 1 229 2.2E-29 T 14-10-2018 llmg_0108 e41e433ec438518f78e88944a45dcb4c 230 Pfam PF08241 Methyltransferase domain 24 114 3.1E-14 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 llmg_2404 fc3ff41ff22287065d8e3ab8df5ee98b 128 Pfam PF11773 Type II secretory pathway pseudopilin 43 124 7.4E-28 T 14-10-2018 IPR021749 Type II secretory pathway pseudopilin llmg_2302 81609e705a45098fe91154d51bff4bf6 148 Pfam PF00210 Ferritin-like domain 8 147 3.2E-28 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 llmg_2302 81609e705a45098fe91154d51bff4bf6 148 PIRSF PIRSF005900 1 148 6.3E-42 T 14-10-2018 IPR002177 DNA-binding protein Dps llmg_2302 81609e705a45098fe91154d51bff4bf6 148 Gene3D G3DSA:1.20.1260.10 1 148 1.2E-44 T 14-10-2018 IPR012347 Ferritin-like llmg_2302 81609e705a45098fe91154d51bff4bf6 148 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 llmg_2302 81609e705a45098fe91154d51bff4bf6 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 2.1E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps llmg_2302 81609e705a45098fe91154d51bff4bf6 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 2.1E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps llmg_2302 81609e705a45098fe91154d51bff4bf6 148 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 125 143 2.1E-14 T 14-10-2018 IPR002177 DNA-binding protein Dps llmg_2302 81609e705a45098fe91154d51bff4bf6 148 SUPERFAMILY SSF47240 6 146 2.34E-38 T 14-10-2018 IPR009078 Ferritin-like superfamily llmg_1162 80415221fa33efd4ca0022ef0b71f7f6 452 SUPERFAMILY SSF52266 1 381 2.29E-41 T 14-10-2018 llmg_1162 80415221fa33efd4ca0022ef0b71f7f6 452 Gene3D G3DSA:3.40.50.1110 209 334 1.3E-15 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_1162 80415221fa33efd4ca0022ef0b71f7f6 452 Gene3D G3DSA:2.60.120.260 49 179 1.0E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily llmg_1162 80415221fa33efd4ca0022ef0b71f7f6 452 SUPERFAMILY SSF49785 43 172 5.81E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily llmg_1162 80415221fa33efd4ca0022ef0b71f7f6 452 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 218 319 3.1E-15 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain llmg_1484 182d5b3cbf273f6908826a22920e659d 216 Gene3D G3DSA:3.40.50.2020 124 216 7.0E-10 T 14-10-2018 llmg_1484 182d5b3cbf273f6908826a22920e659d 216 SUPERFAMILY SSF53271 58 215 9.83E-15 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 Gene3D G3DSA:3.50.50.60 13 338 1.2E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 472 3.5E-160 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 SUPERFAMILY SSF55424 352 471 2.06E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 SUPERFAMILY SSF51905 8 344 6.91E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 Gene3D G3DSA:3.30.390.30 353 472 2.8E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 Gene3D G3DSA:3.50.50.60 157 277 1.2E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PIRSF PIRSF000350 2 464 1.3E-91 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 271 285 1.3E-69 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 355 460 1.4E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 334 4.5E-70 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 3.6E-40 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 3.6E-40 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 3.6E-40 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 3.6E-40 T 14-10-2018 llmg_0071 711cf443b160a9ebf44a1148e7d7ba1d 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 3.6E-40 T 14-10-2018 llmg_1839 162f841d393fa4494ad20ba54fd45179 204 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 11 197 6.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1839 162f841d393fa4494ad20ba54fd45179 204 Gene3D G3DSA:1.10.3720.10 1 195 1.9E-48 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1839 162f841d393fa4494ad20ba54fd45179 204 SUPERFAMILY SSF161098 2 203 3.53E-38 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0630 2f57f9ed6388703cce064fe49100359f 219 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 106 1.1E-29 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 llmg_0630 2f57f9ed6388703cce064fe49100359f 219 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 123 210 2.1E-19 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 llmg_0630 2f57f9ed6388703cce064fe49100359f 219 SUPERFAMILY SSF52540 1 212 2.57E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0630 2f57f9ed6388703cce064fe49100359f 219 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 218 27.256 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 llmg_0630 2f57f9ed6388703cce064fe49100359f 219 Gene3D G3DSA:3.40.50.300 1 219 1.8E-64 T 14-10-2018 llmg_0630 2f57f9ed6388703cce064fe49100359f 219 Pfam PF01121 Dephospho-CoA kinase 4 201 6.3E-45 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 llmg_1809 36772a49d37c1585f7c54b299fa1f342 391 Pfam PF07261 Replication initiation and membrane attachment 255 327 1.3E-10 T 14-10-2018 IPR006343 DnaD domain llmg_1268 2384555930d1ecbbdf46386ec358371b 351 SUPERFAMILY SSF56349 189 348 8.54E-31 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_1268 2384555930d1ecbbdf46386ec358371b 351 Gene3D G3DSA:1.10.443.10 164 351 8.5E-37 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_1268 2384555930d1ecbbdf46386ec358371b 351 Pfam PF00589 Phage integrase family 178 339 7.9E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_1268 2384555930d1ecbbdf46386ec358371b 351 Gene3D G3DSA:1.10.150.130 13 146 3.8E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_0038 94fb86c212fb6be6e9f2f32adfb25688 61 Gene3D G3DSA:1.10.260.40 1 60 1.7E-13 T 14-10-2018 llmg_0038 94fb86c212fb6be6e9f2f32adfb25688 61 SUPERFAMILY SSF47413 3 60 9.65E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0038 94fb86c212fb6be6e9f2f32adfb25688 61 Pfam PF01381 Helix-turn-helix 5 60 1.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0038 94fb86c212fb6be6e9f2f32adfb25688 61 SMART SM00530 4 60 3.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2334 f33a2bfa0b1097c8d9b338a1e4e1a4fd 283 Gene3D G3DSA:1.10.10.10 6 96 1.5E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2334 f33a2bfa0b1097c8d9b338a1e4e1a4fd 283 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 8.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_2334 f33a2bfa0b1097c8d9b338a1e4e1a4fd 283 SUPERFAMILY SSF46785 2 86 1.25E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0793 1c503f549cc3f36eedf8a6a504ed036d 165 SMART SM00530 9 64 5.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0793 1c503f549cc3f36eedf8a6a504ed036d 165 Pfam PF01381 Helix-turn-helix 10 63 1.2E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0793 1c503f549cc3f36eedf8a6a504ed036d 165 SUPERFAMILY SSF47413 3 68 4.41E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0793 1c503f549cc3f36eedf8a6a504ed036d 165 Gene3D G3DSA:1.10.260.40 2 125 1.4E-19 T 14-10-2018 llmg_1466 61a7d87291fe7f585c2393cd6e380da5 261 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 18 214 2.0E-46 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 llmg_1466 61a7d87291fe7f585c2393cd6e380da5 261 SUPERFAMILY SSF52317 33 207 2.22E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_1466 61a7d87291fe7f585c2393cd6e380da5 261 Gene3D G3DSA:3.40.50.880 30 227 2.3E-13 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like llmg_2203 3c740d9fa7dd48b451a3dac97016be4c 203 TIGRFAM TIGR00779 cad: cadmium resistance transporter family protein 12 202 1.8E-54 T 14-10-2018 IPR004676 Cadmium resistance transporter llmg_2203 3c740d9fa7dd48b451a3dac97016be4c 203 Pfam PF03596 Cadmium resistance transporter 12 201 4.6E-87 T 14-10-2018 IPR004676 Cadmium resistance transporter llmg_0709 2ae2749de2b1c45d09d8524e9d2b6786 114 SUPERFAMILY SSF46785 15 108 7.58E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0709 2ae2749de2b1c45d09d8524e9d2b6786 114 Pfam PF03551 Transcriptional regulator PadR-like family 19 89 1.9E-22 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal llmg_0709 2ae2749de2b1c45d09d8524e9d2b6786 114 Gene3D G3DSA:1.10.10.10 4 113 6.9E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 6 250 25.349 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 SUPERFAMILY SSF53613 2 248 1.8E-42 T 14-10-2018 IPR029056 Ribokinase-like llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 Gene3D G3DSA:3.40.1190.20 1 250 1.9E-66 T 14-10-2018 IPR029056 Ribokinase-like llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PIRSF PIRSF000513 1 250 3.1E-82 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 Pfam PF02110 Hydroxyethylthiazole kinase family 4 248 9.3E-55 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 64 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 155 172 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 46 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 82 99 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 112 126 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_1216 31eb8fdc802bb9d96c4da6413899f76a 250 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 12 19 1.4E-20 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 Pfam PF16859 Bacterial transcriptional repressor C-terminal 91 199 4.4E-9 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 Gene3D G3DSA:1.10.10.60 10 62 3.1E-12 T 14-10-2018 llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 61 3.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 SUPERFAMILY SSF48498 93 204 2.37E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 Gene3D G3DSA:1.10.357.10 64 202 7.6E-9 T 14-10-2018 llmg_0576 1f565a05d2ea639ea4e229fafc8f8b8b 209 SUPERFAMILY SSF46689 14 77 1.2E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_2513 1b4b15c8b77d707011936961ec751177 406 Gene3D G3DSA:1.20.1250.20 198 396 3.5E-13 T 14-10-2018 llmg_2513 1b4b15c8b77d707011936961ec751177 406 Gene3D G3DSA:1.20.1250.20 3 195 4.2E-21 T 14-10-2018 llmg_2513 1b4b15c8b77d707011936961ec751177 406 SUPERFAMILY SSF103473 9 400 9.94E-45 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2513 1b4b15c8b77d707011936961ec751177 406 Pfam PF07690 Major Facilitator Superfamily 16 342 8.8E-30 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1017 f18fa533a48aaa6b96c396a8790ccb54 139 SUPERFAMILY SSF46785 9 138 2.39E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1017 f18fa533a48aaa6b96c396a8790ccb54 139 SMART SM00347 23 125 6.2E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1017 f18fa533a48aaa6b96c396a8790ccb54 139 Gene3D G3DSA:1.10.10.10 1 137 2.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1017 f18fa533a48aaa6b96c396a8790ccb54 139 Pfam PF01047 MarR family 31 89 3.5E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 llmg_1955 6831154b33671da1589d912b6803cb1c 204 Gene3D G3DSA:1.10.150.280 133 203 1.2E-21 T 14-10-2018 llmg_1955 6831154b33671da1589d912b6803cb1c 204 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 139 202 1.3E-23 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain llmg_1955 6831154b33671da1589d912b6803cb1c 204 Pfam PF12836 Helix-hairpin-helix motif 140 201 3.9E-23 T 14-10-2018 llmg_1955 6831154b33671da1589d912b6803cb1c 204 SMART SM00278 181 200 6.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_1955 6831154b33671da1589d912b6803cb1c 204 SMART SM00278 151 170 0.25 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 llmg_1955 6831154b33671da1589d912b6803cb1c 204 Pfam PF10531 SLBB domain 57 112 8.4E-13 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 llmg_1955 6831154b33671da1589d912b6803cb1c 204 SUPERFAMILY SSF47781 123 201 2.67E-28 T 14-10-2018 IPR010994 RuvA domain 2-like llmg_0143 16a043ba4efb74a4a954edb6e2bb62b4 269 PRINTS PR00701 60kDa inner membrane protein signature 203 226 1.2E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0143 16a043ba4efb74a4a954edb6e2bb62b4 269 PRINTS PR00701 60kDa inner membrane protein signature 119 142 1.2E-12 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0143 16a043ba4efb74a4a954edb6e2bb62b4 269 Pfam PF02096 60Kd inner membrane protein 55 235 1.4E-54 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 llmg_0143 16a043ba4efb74a4a954edb6e2bb62b4 269 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 55 235 1.8E-60 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 llmg_0143 16a043ba4efb74a4a954edb6e2bb62b4 269 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 240 30.916 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 llmg_0153 efef01699257ef559f8d6ccb87f4da50 183 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 1.4E-26 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 llmg_0485 0d13103e6ee53fbbeb1a685db67529a5 131 Pfam PF06271 RDD family 7 123 1.2E-11 T 14-10-2018 IPR010432 RDD llmg_0951 7af39001c583b97ecf5667d711ba1e04 183 SUPERFAMILY SSF55068 3 161 1.7E-66 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_0951 7af39001c583b97ecf5667d711ba1e04 183 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 155 2.0E-54 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_0951 7af39001c583b97ecf5667d711ba1e04 183 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 35.708 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_0951 7af39001c583b97ecf5667d711ba1e04 183 Gene3D G3DSA:3.30.1060.10 1 165 4.3E-61 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_0951 7af39001c583b97ecf5667d711ba1e04 183 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 3.5E-57 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 llmg_1102 2b66f7f85450cd3b840da5d117bcdf76 383 Gene3D G3DSA:2.20.28.30 95 132 2.0E-6 T 14-10-2018 llmg_0134 857297782108a54ed549a64d65d5630e 316 SUPERFAMILY SSF53448 1 248 1.22E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0134 857297782108a54ed549a64d65d5630e 316 Gene3D G3DSA:3.90.550.10 1 198 4.3E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0134 857297782108a54ed549a64d65d5630e 316 Pfam PF00535 Glycosyl transferase family 2 4 166 6.4E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_2039 e6738b705bf9235750605508d886e688 139 SUPERFAMILY SSF69065 12 134 1.05E-39 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 llmg_2039 e6738b705bf9235750605508d886e688 139 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 9 135 27.665 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family llmg_2039 e6738b705bf9235750605508d886e688 139 Gene3D G3DSA:1.10.1520.10 7 139 1.8E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 llmg_2039 e6738b705bf9235750605508d886e688 139 PIRSF PIRSF005520 5 139 5.6E-50 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family llmg_2039 e6738b705bf9235750605508d886e688 139 Pfam PF00636 Ribonuclease III domain 19 118 5.5E-14 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 llmg_1766 46636d1eab17119d477576a5db49f3e5 185 Gene3D G3DSA:3.40.630.30 11 183 1.5E-43 T 14-10-2018 llmg_1766 46636d1eab17119d477576a5db49f3e5 185 Pfam PF13302 Acetyltransferase (GNAT) domain 18 153 5.9E-31 T 14-10-2018 IPR000182 GNAT domain llmg_1766 46636d1eab17119d477576a5db49f3e5 185 SUPERFAMILY SSF55729 12 164 5.31E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0542 dc42a0f4b658319414e9762b7d1de9e1 196 Gene3D G3DSA:1.10.1760.20 1 196 2.3E-44 T 14-10-2018 llmg_0542 dc42a0f4b658319414e9762b7d1de9e1 196 Pfam PF12822 ECF transporter, substrate-specific component 9 185 1.1E-21 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 llmg_0286 b8c763fbd64a763cad120006cc00fe39 489 SUPERFAMILY SSF49785 309 419 7.94E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily llmg_0286 b8c763fbd64a763cad120006cc00fe39 489 Gene3D G3DSA:2.60.40.10 235 304 2.5E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_0286 b8c763fbd64a763cad120006cc00fe39 489 Gene3D G3DSA:2.60.40.10 316 391 9.8E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 Gene3D G3DSA:3.40.50.2020 11 303 9.0E-105 T 14-10-2018 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 8 124 2.3E-47 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 315 3.5E-101 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 210 314 1.9E-20 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 Gene3D G3DSA:3.40.50.2020 151 291 9.0E-105 T 14-10-2018 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 8 315 43.468 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 SUPERFAMILY SSF53271 9 161 3.43E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 SUPERFAMILY SSF53271 110 306 1.11E-41 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_2046 e4ed6c363f5815f0582b6f4460514bae 321 SMART SM01400 8 124 2.2E-72 T 14-10-2018 llmg_0195 a014c1cffe1df03d5cdf878b323edf03 203 Pfam PF00881 Nitroreductase family 8 182 1.6E-25 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 llmg_0195 a014c1cffe1df03d5cdf878b323edf03 203 Gene3D G3DSA:3.40.109.10 1 202 2.4E-42 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_0195 a014c1cffe1df03d5cdf878b323edf03 203 SUPERFAMILY SSF55469 1 201 1.44E-43 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 llmg_2394 b21695c60d3502a468147822902c1b72 143 Pfam PF11694 Protein of unknown function (DUF3290) 2 142 1.3E-52 T 14-10-2018 IPR021707 Protein of unknown function DUF3290 llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 Gene3D G3DSA:1.10.220.80 14 93 3.5E-28 T 14-10-2018 IPR023324 BH2638-like superfamily llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 PIRSF PIRSF037260 1 92 2.0E-38 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 Hamap MF_01041 UPF0223 protein . 3 90 24.672 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 4 85 5.0E-38 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 SUPERFAMILY SSF158504 6 88 2.09E-32 T 14-10-2018 IPR023324 BH2638-like superfamily llmg_0515 eef43d1bbad983e12ec0384bb80bbb2f 93 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 87 6.6E-35 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 llmg_0607 b29078bc9db2b1d73eb1cbda650735e1 170 Pfam PF00156 Phosphoribosyl transferase domain 35 167 2.5E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 llmg_0607 b29078bc9db2b1d73eb1cbda650735e1 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.806 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 llmg_0607 b29078bc9db2b1d73eb1cbda650735e1 170 Gene3D G3DSA:3.40.50.2020 1 170 8.7E-62 T 14-10-2018 llmg_0607 b29078bc9db2b1d73eb1cbda650735e1 170 SUPERFAMILY SSF53271 3 167 7.95E-52 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_0607 b29078bc9db2b1d73eb1cbda650735e1 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 6.6E-69 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 llmg_2073 d36840d41ecd554c82ac00cca105271d 226 SUPERFAMILY SSF53167 1 223 6.28E-69 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 llmg_2073 d36840d41ecd554c82ac00cca105271d 226 Gene3D G3DSA:3.40.50.1580 1 226 2.6E-64 T 14-10-2018 llmg_2073 d36840d41ecd554c82ac00cca105271d 226 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 221 1.4E-60 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 llmg_2073 d36840d41ecd554c82ac00cca105271d 226 Pfam PF01048 Phosphorylase superfamily 2 219 2.1E-42 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 llmg_0935 581a31aed254be6c97fe6627d81d0f42 281 Pfam PF12146 Serine aminopeptidase, S33 26 266 4.0E-51 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 llmg_0935 581a31aed254be6c97fe6627d81d0f42 281 Gene3D G3DSA:3.40.50.1820 1 281 2.1E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0935 581a31aed254be6c97fe6627d81d0f42 281 SUPERFAMILY SSF53474 12 279 8.64E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_1888 ab70c6a2a2b7cdacf7dc04ec1c584c79 163 Gene3D G3DSA:1.10.10.1190 106 161 6.7E-11 T 14-10-2018 llmg_1888 ab70c6a2a2b7cdacf7dc04ec1c584c79 163 Pfam PF07275 Antirestriction protein (ArdA) 6 160 4.5E-32 T 14-10-2018 IPR009899 Antirestriction llmg_1888 ab70c6a2a2b7cdacf7dc04ec1c584c79 163 Gene3D G3DSA:3.10.20.480 1 64 1.0E-17 T 14-10-2018 llmg_1937 655de107bbff2e4d03d7f62e7d03838b 307 Pfam PF04657 Putative inner membrane exporter, YdcZ 165 302 1.1E-35 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ llmg_1937 655de107bbff2e4d03d7f62e7d03838b 307 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 143 1.7E-38 T 14-10-2018 IPR006750 Putative inner membrane exporter, YdcZ llmg_1435 112febc41ba1fc5e2b9cf1d3e41c2ed3 152 Pfam PF06030 Bacterial protein of unknown function (DUF916) 28 148 5.1E-20 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 SUPERFAMILY SSF53335 76 384 1.78E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 142 348 1.9E-30 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 Gene3D G3DSA:3.40.50.150 173 389 4.5E-57 T 14-10-2018 llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 Gene3D G3DSA:3.30.750.80 67 172 5.9E-37 T 14-10-2018 llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 SUPERFAMILY SSF88697 1 65 2.73E-18 T 14-10-2018 IPR015947 PUA-like superfamily llmg_0263 b77e001c0604907cdaf5218c2c5749d6 389 Gene3D G3DSA:2.30.130.10 1 66 2.7E-16 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 llmg_1621 35edb29495b889669e30a67f95020478 492 Gene3D G3DSA:3.90.550.10 38 240 4.5E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1621 35edb29495b889669e30a67f95020478 492 SUPERFAMILY SSF53448 40 266 3.46E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1621 35edb29495b889669e30a67f95020478 492 Pfam PF00535 Glycosyl transferase family 2 43 172 4.1E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1560 359749e174ab43911dfadc06b399905c 179 Gene3D G3DSA:1.20.1260.10 1 179 3.7E-60 T 14-10-2018 IPR012347 Ferritin-like llmg_1560 359749e174ab43911dfadc06b399905c 179 SUPERFAMILY SSF47240 3 171 6.87E-57 T 14-10-2018 IPR009078 Ferritin-like superfamily llmg_0554 882eb5f3fff34f1a50b10b0822c16a37 391 ProSitePatterns PS01007 Transposases, Mutator family, signature. 228 252 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_0554 882eb5f3fff34f1a50b10b0822c16a37 391 Pfam PF00872 Transposase, Mutator family 7 371 2.5E-147 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 llmg_1793 50b5fe73ad168cc151115219dd76a470 101 Gene3D G3DSA:3.30.1330.30 1 100 5.5E-33 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_1793 50b5fe73ad168cc151115219dd76a470 101 SUPERFAMILY SSF55315 5 100 3.53E-23 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like llmg_1793 50b5fe73ad168cc151115219dd76a470 101 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 94 8.6E-13 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 Gene3D G3DSA:1.10.580.10 60 413 3.3E-105 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 Gene3D G3DSA:1.10.230.10 270 388 3.3E-105 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PIRSF PIRSF001369 23 441 7.0E-86 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 SUPERFAMILY SSF48256 8 429 3.93E-100 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PRINTS PR00143 Citrate synthase signature 165 178 9.6E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PRINTS PR00143 Citrate synthase signature 221 236 9.6E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PRINTS PR00143 Citrate synthase signature 394 408 9.6E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PRINTS PR00143 Citrate synthase signature 244 272 9.6E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 PRINTS PR00143 Citrate synthase signature 374 390 9.6E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_0635 45f7582d5fa2b5ea47d0e1948e4e67b0 441 Pfam PF00285 Citrate synthase, C-terminal domain 36 425 5.4E-116 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 Gene3D G3DSA:3.60.10.10 1 283 1.1E-64 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 4 283 6.7E-71 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 SUPERFAMILY SSF56219 4 285 6.67E-54 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 39 48 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 261 2.8E-16 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase llmg_1765 40bac882c16ab625a5e9b0d7134647fc 285 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 244 255 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 llmg_1354 e9b83fa4574a0bbc98187ea90d2648ba 534 Pfam PF14266 Putative component of 'biosynthetic module' 33 511 1.2E-81 T 14-10-2018 IPR025647 Putative component of 'biosynthetic module' llmg_1379 f496d210447d2c44826710ebdac100ff 394 Pfam PF13154 Protein of unknown function (DUF3991) 129 187 1.1E-5 T 14-10-2018 IPR025054 Domain of unknown function DUF3991 llmg_1379 f496d210447d2c44826710ebdac100ff 394 SUPERFAMILY SSF57783 23 97 8.5E-13 T 14-10-2018 llmg_1379 f496d210447d2c44826710ebdac100ff 394 Pfam PF13155 Toprim-like 241 356 4.7E-10 T 14-10-2018 llmg_1167 24bfd9dc83e6980a6431e43a82b514e8 43 Gene3D G3DSA:1.50.10.10 1 42 7.1E-10 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 llmg_1167 24bfd9dc83e6980a6431e43a82b514e8 43 SUPERFAMILY SSF48208 4 40 1.02E-7 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 llmg_0553 ab67ace3aa41833118906642fa984877 94 SUPERFAMILY SSF54909 1 88 9.58E-21 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel llmg_0553 ab67ace3aa41833118906642fa984877 94 Gene3D G3DSA:3.30.70.100 1 93 4.3E-23 T 14-10-2018 llmg_0553 ab67ace3aa41833118906642fa984877 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 1.0E-17 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain llmg_1703 007c8dc63de84eb09a27c9d1fbaa9ddd 142 Pfam PF03960 ArsC family 35 113 7.8E-22 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_1703 007c8dc63de84eb09a27c9d1fbaa9ddd 142 SUPERFAMILY SSF52833 1 130 1.72E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1703 007c8dc63de84eb09a27c9d1fbaa9ddd 142 Gene3D G3DSA:3.40.30.10 1 120 5.5E-43 T 14-10-2018 llmg_1703 007c8dc63de84eb09a27c9d1fbaa9ddd 142 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 1.1E-35 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_0503 3296337cfc56eceb3322b8fa640831ad 152 Pfam PF04397 LytTr DNA-binding domain 56 146 1.4E-20 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 llmg_0503 3296337cfc56eceb3322b8fa640831ad 152 SMART SM00850 52 147 2.4E-21 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 llmg_0503 3296337cfc56eceb3322b8fa640831ad 152 Gene3D G3DSA:2.40.50.1020 40 152 4.0E-9 T 14-10-2018 llmg_2561 41b29b04a61cd02c9475147a44903fd8 295 SUPERFAMILY SSF103481 37 131 2.35E-8 T 14-10-2018 llmg_2561 41b29b04a61cd02c9475147a44903fd8 295 Pfam PF06800 Sugar transport protein 5 291 7.2E-112 T 14-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 llmg_0871 919710824410933faeac0c150179da9b 361 SUPERFAMILY SSF55347 128 329 3.87E-69 T 14-10-2018 llmg_0871 919710824410933faeac0c150179da9b 361 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 5.9E-31 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 llmg_0871 919710824410933faeac0c150179da9b 361 PIRSF PIRSF000148 3 347 1.4E-123 T 14-10-2018 llmg_0871 919710824410933faeac0c150179da9b 361 SMART SM00859 5 120 4.7E-42 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 llmg_0871 919710824410933faeac0c150179da9b 361 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_0871 919710824410933faeac0c150179da9b 361 Gene3D G3DSA:3.40.50.720 6 339 1.5E-140 T 14-10-2018 llmg_0871 919710824410933faeac0c150179da9b 361 Gene3D G3DSA:3.30.360.10 127 325 1.5E-140 T 14-10-2018 llmg_0871 919710824410933faeac0c150179da9b 361 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 342 36.852 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_0871 919710824410933faeac0c150179da9b 361 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 138 328 1.3E-53 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 llmg_0871 919710824410933faeac0c150179da9b 361 SUPERFAMILY SSF51735 4 156 2.18E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0871 919710824410933faeac0c150179da9b 361 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 342 1.0E-137 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 llmg_0811 901d5be9a5380a6b75e358d1ab4db1e1 161 Gene3D G3DSA:3.30.1330.70 48 161 2.6E-8 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 llmg_0811 901d5be9a5380a6b75e358d1ab4db1e1 161 SUPERFAMILY SSF103084 37 161 8.24E-20 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 llmg_0880 9acce8fc6a320e190b323c1d1c99ac8e 190 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 39 73 2.1E-4 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal llmg_0880 9acce8fc6a320e190b323c1d1c99ac8e 190 SUPERFAMILY SSF51735 1 188 1.97E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0880 9acce8fc6a320e190b323c1d1c99ac8e 190 Gene3D G3DSA:3.40.50.720 1 169 2.4E-48 T 14-10-2018 llmg_1591 e38d0c75396f96a1b55e94ebb1ef6373 295 SUPERFAMILY SSF161098 59 256 3.92E-39 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1591 e38d0c75396f96a1b55e94ebb1ef6373 295 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 58 165 2.1E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 llmg_1591 e38d0c75396f96a1b55e94ebb1ef6373 295 Gene3D G3DSA:1.10.3720.10 45 272 7.0E-49 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1591 e38d0c75396f96a1b55e94ebb1ef6373 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 271 5.6E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2223 0b3e9dfb3b384fad319e22614a9fcf4c 286 SUPERFAMILY SSF54001 124 255 5.56E-10 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily llmg_0346 b42306afaa3bffd17d885dba4a78397c 259 SUPERFAMILY SSF52540 6 229 1.15E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0346 b42306afaa3bffd17d885dba4a78397c 259 Gene3D G3DSA:3.40.50.300 3 253 3.7E-65 T 14-10-2018 llmg_0346 b42306afaa3bffd17d885dba4a78397c 259 Pfam PF00005 ABC transporter 18 166 1.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_0346 b42306afaa3bffd17d885dba4a78397c 259 SMART SM00382 27 216 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Hamap MF_01114 Regulatory protein RecX [recX]. 41 211 17.28 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Gene3D G3DSA:1.10.10.10 154 218 1.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Gene3D G3DSA:1.10.10.10 219 269 1.5E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Gene3D G3DSA:1.10.10.10 108 151 2.0E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Gene3D G3DSA:1.10.10.2800 1 107 5.0E-16 T 14-10-2018 llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Pfam PF02631 RecX family 84 206 1.9E-25 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 llmg_2466 62a8fc2c15859901dddeaed475d59d06 269 Pfam PF02631 RecX family 208 263 1.1E-4 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 llmg_0681 1710153546716e249fc7746733dbb27c 161 SUPERFAMILY SSF47413 5 66 2.68E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0681 1710153546716e249fc7746733dbb27c 161 Pfam PF01381 Helix-turn-helix 7 59 3.5E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0681 1710153546716e249fc7746733dbb27c 161 SMART SM00530 5 59 1.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0681 1710153546716e249fc7746733dbb27c 161 Gene3D G3DSA:1.10.260.40 3 71 3.3E-19 T 14-10-2018 llmg_1995 c808553a2c0bd470a9aa2dacc1e400f6 265 Pfam PF08820 Domain of unknown function (DUF1803) 4 106 1.4E-33 T 14-10-2018 IPR014924 Protein of unknown function DUF1803 llmg_0668 e15be2c2a375031e24ea2cfa59e65287 105 Gene3D G3DSA:3.40.630.30 1 99 1.6E-23 T 14-10-2018 llmg_0668 e15be2c2a375031e24ea2cfa59e65287 105 SUPERFAMILY SSF55729 4 95 3.31E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0668 e15be2c2a375031e24ea2cfa59e65287 105 Pfam PF13673 Acetyltransferase (GNAT) domain 6 94 2.3E-12 T 14-10-2018 IPR000182 GNAT domain llmg_0633 ad1d3d344b55c23d8f84e0ba36fc5c89 420 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 356 380 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0633 ad1d3d344b55c23d8f84e0ba36fc5c89 420 Pfam PF01098 Cell cycle protein 13 399 4.3E-82 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0415 264663e7760a20b4a92c621844505d52 211 SUPERFAMILY SSF52540 1 206 1.29E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0415 264663e7760a20b4a92c621844505d52 211 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 llmg_0415 264663e7760a20b4a92c621844505d52 211 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 30.45 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 llmg_0415 264663e7760a20b4a92c621844505d52 211 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 197 8.5E-58 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 llmg_0415 264663e7760a20b4a92c621844505d52 211 Pfam PF02223 Thymidylate kinase 8 197 9.1E-53 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 llmg_0415 264663e7760a20b4a92c621844505d52 211 Gene3D G3DSA:3.40.50.300 1 208 5.3E-66 T 14-10-2018 llmg_1803 6af1b68f94b633de3653f4496e5b1abe 1175 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 19 37 4.9E-6 T 14-10-2018 IPR022263 KxYKxGKxW signal peptide llmg_1606 738a429ae9ddb0979ec02036e0b21612 151 Pfam PF01467 Cytidylyltransferase-like 9 120 1.0E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_1606 738a429ae9ddb0979ec02036e0b21612 151 Gene3D G3DSA:3.40.50.620 4 133 2.2E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_1606 738a429ae9ddb0979ec02036e0b21612 151 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 70 4.7E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 llmg_1606 738a429ae9ddb0979ec02036e0b21612 151 SUPERFAMILY SSF52374 5 130 1.24E-23 T 14-10-2018 llmg_1606 738a429ae9ddb0979ec02036e0b21612 151 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 7 131 5.4E-67 T 14-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 llmg_2007 fd970e3134f6d2183d7aaa468ec5eb3e 193 SUPERFAMILY SSF52141 4 192 5.23E-45 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_2007 fd970e3134f6d2183d7aaa468ec5eb3e 193 SMART SM00986 28 185 7.8E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_2007 fd970e3134f6d2183d7aaa468ec5eb3e 193 Gene3D G3DSA:3.40.470.10 1 193 3.1E-67 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_2007 fd970e3134f6d2183d7aaa468ec5eb3e 193 SMART SM00987 28 185 7.8E-21 T 14-10-2018 llmg_2007 fd970e3134f6d2183d7aaa468ec5eb3e 193 Pfam PF03167 Uracil DNA glycosylase superfamily 31 184 1.2E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 llmg_0594 04211d77a20bb03f9cde13e8c9bafd48 338 SUPERFAMILY SSF56349 30 326 3.24E-56 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 llmg_0594 04211d77a20bb03f9cde13e8c9bafd48 338 Gene3D G3DSA:1.10.443.10 134 332 5.5E-42 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 llmg_0594 04211d77a20bb03f9cde13e8c9bafd48 338 Pfam PF00589 Phage integrase family 144 320 2.2E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 llmg_0594 04211d77a20bb03f9cde13e8c9bafd48 338 Pfam PF13102 Phage integrase SAM-like domain 30 118 6.4E-5 T 14-10-2018 IPR025269 Phage integrase SAM-like domain llmg_0594 04211d77a20bb03f9cde13e8c9bafd48 338 Gene3D G3DSA:1.10.150.130 25 133 1.8E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal llmg_0118 44fa5badd33b801cc7abf6fc86ab1d15 465 PIRSF PIRSF006060 12 465 6.7E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0118 44fa5badd33b801cc7abf6fc86ab1d15 465 Pfam PF13520 Amino acid permease 24 452 6.8E-51 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0118 44fa5badd33b801cc7abf6fc86ab1d15 465 Gene3D G3DSA:1.20.1740.10 18 465 8.6E-101 T 14-10-2018 llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 Gene3D G3DSA:1.10.3810.10 100 294 3.5E-66 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 Pfam PF00905 Penicillin binding protein transpeptidase domain 378 633 1.4E-35 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 Gene3D G3DSA:3.40.710.10 309 652 3.1E-101 T 14-10-2018 llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 SUPERFAMILY SSF56601 265 673 3.59E-97 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 SUPERFAMILY SSF53955 97 302 2.28E-65 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 Pfam PF00912 Transglycosylase 113 278 1.7E-56 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_2392 fc3feffa099cfa0c2d466c7a0d074ee0 743 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 118 649 1.3E-179 T 14-10-2018 llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 SUPERFAMILY SSF49478 895 951 9.81E-5 T 14-10-2018 llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Pfam PF06488 Phage tail tube protein 1039 1121 1.4E-12 T 14-10-2018 IPR010517 Phage tail tube protein, Siphoviridae llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Pfam PF06488 Phage tail tube protein 687 770 1.6E-13 T 14-10-2018 IPR010517 Phage tail tube protein, Siphoviridae llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Pfam PF06488 Phage tail tube protein 332 419 1.2E-13 T 14-10-2018 IPR010517 Phage tail tube protein, Siphoviridae llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Pfam PF06488 Phage tail tube protein 867 947 1.1E-12 T 14-10-2018 IPR010517 Phage tail tube protein, Siphoviridae llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Pfam PF06488 Phage tail tube protein 516 596 2.8E-13 T 14-10-2018 IPR010517 Phage tail tube protein, Siphoviridae llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 1217 1298 8.9E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 1126 1207 5.3E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 424 505 2.4E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 601 682 2.0E-14 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 952 1033 7.8E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1127 b2fd6cf2fc669ca77ce573c48bca390a 1349 Gene3D G3DSA:2.60.40.10 775 856 2.5E-13 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_0884 af68003105945db396ec35c5abbc777b 485 Pfam PF01814 Hemerythrin HHE cation binding domain 95 224 7.2E-18 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 llmg_0884 af68003105945db396ec35c5abbc777b 485 Pfam PF13596 PAS domain 326 433 5.5E-20 T 14-10-2018 llmg_0884 af68003105945db396ec35c5abbc777b 485 Gene3D G3DSA:1.20.120.520 89 288 1.9E-46 T 14-10-2018 llmg_0884 af68003105945db396ec35c5abbc777b 485 Pfam PF04282 Family of unknown function (DUF438) 17 81 2.1E-23 T 14-10-2018 IPR007380 Domain of unknown function DUF438 llmg_0884 af68003105945db396ec35c5abbc777b 485 Gene3D G3DSA:3.30.450.20 307 451 2.2E-39 T 14-10-2018 llmg_0376 5c30e38b8bc9a95e34189c69d9be9606 459 Gene3D G3DSA:1.20.1740.10 9 458 6.0E-48 T 14-10-2018 llmg_0376 5c30e38b8bc9a95e34189c69d9be9606 459 PIRSF PIRSF006060 1 459 2.4E-53 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_0376 5c30e38b8bc9a95e34189c69d9be9606 459 Pfam PF00324 Amino acid permease 18 435 1.1E-83 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 llmg_2398 f5070e6a7468a17c2c6596d15c6eb509 269 Pfam PF00950 ABC 3 transport family 6 261 1.6E-75 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 llmg_2398 f5070e6a7468a17c2c6596d15c6eb509 269 SUPERFAMILY SSF81345 3 259 1.06E-37 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_0712 c58e62413250cc5f0435f9ed573f6a26 201 TIGRFAM TIGR04498 AbiV_defense: abortive infection protein, AbiV family 30 168 2.9E-34 T 14-10-2018 IPR030987 Abortive infection protein, AbiV family llmg_0861 50535ab1f86e75dd655105f6d0360568 293 SUPERFAMILY SSF74650 4 291 2.13E-48 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_0861 50535ab1f86e75dd655105f6d0360568 293 Gene3D G3DSA:2.70.98.10 5 291 3.0E-88 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 llmg_0861 50535ab1f86e75dd655105f6d0360568 293 Pfam PF01263 Aldose 1-epimerase 5 273 1.0E-36 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 llmg_0097 4c116b63ae393385b7b9a0e0e5cf85c6 196 Gene3D G3DSA:2.30.110.10 1 196 1.6E-61 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 llmg_0097 4c116b63ae393385b7b9a0e0e5cf85c6 196 Pfam PF01613 Flavin reductase like domain 23 162 2.8E-21 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 llmg_0097 4c116b63ae393385b7b9a0e0e5cf85c6 196 SUPERFAMILY SSF50475 3 191 4.19E-45 T 14-10-2018 llmg_0097 4c116b63ae393385b7b9a0e0e5cf85c6 196 SMART SM00903 20 167 1.9E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 llmg_2186 260e926486df25541a4b429187450997 314 Pfam PF01966 HD domain 160 279 4.5E-8 T 14-10-2018 IPR006674 HD domain llmg_2186 260e926486df25541a4b429187450997 314 SUPERFAMILY SSF109604 142 281 4.71E-8 T 14-10-2018 llmg_2186 260e926486df25541a4b429187450997 314 Gene3D G3DSA:1.10.3210.10 116 299 1.3E-5 T 14-10-2018 llmg_1082 564563bacd48573f1440279c7eeb362b 251 Pfam PF05857 TraX protein 8 246 8.5E-30 T 14-10-2018 IPR008875 TraX llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 Pfam PF00265 Thymidine kinase 2 184 7.1E-50 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 PIRSF PIRSF035805 1 189 6.1E-61 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 Gene3D G3DSA:3.40.50.300 1 139 1.7E-29 T 14-10-2018 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 Hamap MF_00124 Thymidine kinase [tdk]. 1 187 34.7 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 SUPERFAMILY SSF57716 140 187 6.18E-18 T 14-10-2018 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 171 184 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 SUPERFAMILY SSF52540 1 139 1.63E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0555 f5db670dc41a6c5e07fce29b643b56ac 189 Gene3D G3DSA:3.30.60.20 141 186 2.7E-13 T 14-10-2018 llmg_0221 69f65c8c282a2a0fdf3e5651c5be37df 330 Gene3D G3DSA:3.90.550.10 1 253 4.8E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0221 69f65c8c282a2a0fdf3e5651c5be37df 330 SUPERFAMILY SSF53448 7 230 3.78E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0221 69f65c8c282a2a0fdf3e5651c5be37df 330 Pfam PF00535 Glycosyl transferase family 2 9 119 1.3E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 Pfam PF00005 ABC transporter 20 191 4.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 Gene3D G3DSA:3.40.50.300 289 546 1.0E-55 T 14-10-2018 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 SMART SM00382 351 517 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 SMART SM00382 28 236 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 SUPERFAMILY SSF52540 306 527 5.65E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 SUPERFAMILY SSF52540 4 268 8.88E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 Gene3D G3DSA:3.40.50.300 10 285 1.4E-68 T 14-10-2018 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 Pfam PF00005 ABC transporter 345 472 5.4E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_1512 90a0c97e701678c6c68b870dbc84b449 635 Pfam PF12848 ABC transporter 230 311 3.0E-26 T 14-10-2018 IPR032781 ABC-transporter extension domain llmg_2149 c5f0b610a9169bb591962be5841d3603 173 Gene3D G3DSA:3.90.79.10 6 155 1.3E-17 T 14-10-2018 llmg_2149 c5f0b610a9169bb591962be5841d3603 173 Pfam PF00293 NUDIX domain 10 101 1.1E-8 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 llmg_2149 c5f0b610a9169bb591962be5841d3603 173 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 llmg_2149 c5f0b610a9169bb591962be5841d3603 173 SUPERFAMILY SSF55811 9 146 4.47E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 Gene3D G3DSA:1.10.10.10 1 88 2.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 65 5.3E-13 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 SUPERFAMILY SSF53850 94 292 7.24E-21 T 14-10-2018 llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 SUPERFAMILY SSF46785 2 85 4.04E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 Gene3D G3DSA:3.40.190.290 93 294 9.7E-29 T 14-10-2018 llmg_1674 c0ffa15e484879d4dd086607381fc4b8 295 Pfam PF03466 LysR substrate binding domain 94 292 2.0E-27 T 14-10-2018 IPR005119 LysR, substrate-binding llmg_0212 6bbcdc907a9b215b9317d7f7808cc16a 313 Pfam PF00535 Glycosyl transferase family 2 5 162 3.0E-21 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0212 6bbcdc907a9b215b9317d7f7808cc16a 313 SUPERFAMILY SSF53448 3 236 3.66E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0212 6bbcdc907a9b215b9317d7f7808cc16a 313 Gene3D G3DSA:3.90.550.10 1 253 7.9E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0562 91d2da3d44bd4add00e1eea907406f6c 306 Gene3D G3DSA:3.90.870.10 96 302 7.2E-59 T 14-10-2018 llmg_0562 91d2da3d44bd4add00e1eea907406f6c 306 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 101 294 1.9E-49 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 llmg_0562 91d2da3d44bd4add00e1eea907406f6c 306 SUPERFAMILY SSF55821 103 300 1.01E-50 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily llmg_0562 91d2da3d44bd4add00e1eea907406f6c 306 PIRSF PIRSF004930 78 305 2.1E-57 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 llmg_0562 91d2da3d44bd4add00e1eea907406f6c 306 Pfam PF01300 Telomere recombination 115 288 1.2E-44 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 llmg_2055 5be998262448bd54f173fbc00fd7a632 311 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 6.8E-13 T 14-10-2018 IPR019933 DivIVA domain llmg_2055 5be998262448bd54f173fbc00fd7a632 311 Pfam PF05103 DivIVA protein 96 154 1.8E-8 T 14-10-2018 IPR007793 DivIVA family llmg_2055 5be998262448bd54f173fbc00fd7a632 311 Pfam PF05103 DivIVA protein 5 110 1.2E-27 T 14-10-2018 IPR007793 DivIVA family llmg_1137 66d32a47273031d18897b9986c2e3b3a 279 SUPERFAMILY SSF81345 6 262 1.06E-41 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_1137 66d32a47273031d18897b9986c2e3b3a 279 Pfam PF00950 ABC 3 transport family 12 266 3.9E-77 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 llmg_1137 66d32a47273031d18897b9986c2e3b3a 279 Gene3D G3DSA:1.10.3470.10 8 268 3.8E-9 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 Pfam PF13183 4Fe-4S dicluster domain 312 378 2.3E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 Gene3D G3DSA:3.40.50.10420 129 297 3.0E-9 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 Pfam PF02589 LUD domain 70 296 9.3E-46 T 14-10-2018 IPR003741 LUD domain llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 19 470 1.8E-155 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 314 325 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 SUPERFAMILY SSF46548 289 391 2.41E-15 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 llmg_1916 647f9ca638fe3f63f309fa25df5e8ae6 490 SUPERFAMILY SSF100950 66 297 1.55E-31 T 14-10-2018 IPR037171 NagB/RpiA transferase-like llmg_1467 95aa35f57bbdb7c637e1d60ccf6b74d0 893 Pfam PF02687 FtsX-like permease family 793 876 5.5E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_1467 95aa35f57bbdb7c637e1d60ccf6b74d0 893 Pfam PF02687 FtsX-like permease family 391 479 3.8E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 llmg_1467 95aa35f57bbdb7c637e1d60ccf6b74d0 893 Pfam PF12704 MacB-like periplasmic core domain 530 734 4.4E-8 T 14-10-2018 IPR025857 MacB-like periplasmic core domain llmg_1898 fde3beae042203fec1634b2c7493d0d4 297 SUPERFAMILY SSF161098 11 283 3.66E-35 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1898 fde3beae042203fec1634b2c7493d0d4 297 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 7 290 7.4E-75 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 llmg_1898 fde3beae042203fec1634b2c7493d0d4 297 Gene3D G3DSA:1.10.3720.10 57 293 8.1E-34 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1898 fde3beae042203fec1634b2c7493d0d4 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 294 1.3E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0903 3f6e2793418be9f7a251f2df88b7e289 278 Gene3D G3DSA:3.60.21.10 47 254 2.6E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_0903 3f6e2793418be9f7a251f2df88b7e289 278 SUPERFAMILY SSF56300 49 277 3.07E-31 T 14-10-2018 llmg_0903 3f6e2793418be9f7a251f2df88b7e289 278 Pfam PF00149 Calcineurin-like phosphoesterase 49 213 3.9E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_0953 d4abc780e8c4046eaf19b1c12ca6ba9b 235 Pfam PF06541 Putative ABC-transporter type IV 6 157 9.5E-44 T 14-10-2018 IPR010540 Putative ABC-transporter type IV CmpB/TMEM229 llmg_0238 6cf73836f8fd0f07baec364f0e5aefab 143 SUPERFAMILY SSF55729 1 135 6.42E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0238 6cf73836f8fd0f07baec364f0e5aefab 143 Gene3D G3DSA:3.40.630.30 1 139 1.5E-29 T 14-10-2018 llmg_0238 6cf73836f8fd0f07baec364f0e5aefab 143 Pfam PF13673 Acetyltransferase (GNAT) domain 25 132 1.3E-14 T 14-10-2018 IPR000182 GNAT domain llmg_0995 409cc74fafd8688914e33e66385ad42f 230 SUPERFAMILY SSF56784 2 229 4.99E-40 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0995 409cc74fafd8688914e33e66385ad42f 230 Gene3D G3DSA:3.40.50.1000 3 223 7.8E-65 T 14-10-2018 IPR023214 HAD superfamily llmg_0995 409cc74fafd8688914e33e66385ad42f 230 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 80 194 6.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 llmg_0995 409cc74fafd8688914e33e66385ad42f 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 199 1.7E-24 T 14-10-2018 llmg_0995 409cc74fafd8688914e33e66385ad42f 230 Gene3D G3DSA:1.10.150.240 14 99 7.8E-65 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 llmg_0995 409cc74fafd8688914e33e66385ad42f 230 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 223 6.1E-56 T 14-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 llmg_2236 4d3ff0dfb58a79cb707fb3c268340eae 339 PIRSF PIRSF005096 2 339 2.1E-94 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 llmg_2236 4d3ff0dfb58a79cb707fb3c268340eae 339 SUPERFAMILY SSF74650 9 336 1.57E-96 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 llmg_2236 4d3ff0dfb58a79cb707fb3c268340eae 339 Pfam PF01263 Aldose 1-epimerase 14 335 3.6E-74 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 llmg_2236 4d3ff0dfb58a79cb707fb3c268340eae 339 Gene3D G3DSA:2.70.98.10 2 339 2.7E-103 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 llmg_2351 3d03e5d2966274deb4e43b0e2084da3f 326 SUPERFAMILY SSF53448 2 223 9.85E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2351 3d03e5d2966274deb4e43b0e2084da3f 326 Gene3D G3DSA:3.90.550.10 1 199 1.5E-50 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2351 3d03e5d2966274deb4e43b0e2084da3f 326 Pfam PF00535 Glycosyl transferase family 2 5 133 1.4E-31 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1075 15be27708fd64fd047534c797b5d3be9 407 Pfam PF00665 Integrase core domain 118 244 5.2E-19 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 llmg_1075 15be27708fd64fd047534c797b5d3be9 407 Gene3D G3DSA:3.30.420.10 143 296 5.9E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 llmg_1075 15be27708fd64fd047534c797b5d3be9 407 SUPERFAMILY SSF53098 124 286 6.22E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_2344 0a6295775008251f43bdaa6f67ff04d1 187 Gene3D G3DSA:3.90.550.10 1 186 9.0E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2344 0a6295775008251f43bdaa6f67ff04d1 187 Pfam PF00535 Glycosyl transferase family 2 5 147 3.8E-38 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_2344 0a6295775008251f43bdaa6f67ff04d1 187 SUPERFAMILY SSF53448 2 183 1.59E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 SUPERFAMILY SSF56601 240 670 2.69E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 Gene3D G3DSA:1.10.3810.10 75 274 1.5E-62 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 Gene3D G3DSA:3.40.710.10 287 681 1.1E-120 T 14-10-2018 llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 Pfam PF00905 Penicillin binding protein transpeptidase domain 353 649 1.2E-30 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 Pfam PF00912 Transglycosylase 83 258 1.8E-54 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_0511 edbd7c86ed86b13d37adc98617ecf6c5 693 SUPERFAMILY SSF53955 74 285 1.27E-61 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_0852 0ae5b9c3097c53673e625b6e5c5f0813 319 PIRSF PIRSF034934 1 317 2.8E-69 T 14-10-2018 IPR017034 Abortive infection system protein AbiD/AbiF llmg_0852 0ae5b9c3097c53673e625b6e5c5f0813 319 Pfam PF07751 Abi-like protein 34 227 8.8E-38 T 14-10-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like llmg_1596 cc7d8d33fbd7be0a43f7f535fc8db796 108 Gene3D G3DSA:3.30.110.70 5 108 1.1E-27 T 14-10-2018 llmg_1596 cc7d8d33fbd7be0a43f7f535fc8db796 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 4 105 21.277 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 llmg_1596 cc7d8d33fbd7be0a43f7f535fc8db796 108 SUPERFAMILY SSF117782 4 107 4.32E-32 T 14-10-2018 IPR035439 UPF0145 domain superfamily llmg_1596 cc7d8d33fbd7be0a43f7f535fc8db796 108 Pfam PF01906 Putative heavy-metal-binding 4 105 1.2E-33 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 llmg_0744 06c3902a168305e7364962be490197c0 541 Pfam PF00128 Alpha amylase, catalytic domain 31 366 6.3E-105 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0744 06c3902a168305e7364962be490197c0 541 Gene3D G3DSA:3.90.400.10 108 177 2.1E-163 T 14-10-2018 llmg_0744 06c3902a168305e7364962be490197c0 541 SUPERFAMILY SSF51445 9 462 3.47E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0744 06c3902a168305e7364962be490197c0 541 SMART SM00642 16 408 2.2E-134 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 llmg_0744 06c3902a168305e7364962be490197c0 541 Gene3D G3DSA:3.20.20.80 9 457 2.1E-163 T 14-10-2018 llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 Pfam PF11967 Recombination protein O N terminal 1 72 1.5E-15 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 Pfam PF02565 Recombination protein O C terminal 84 237 2.6E-36 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 TIGRFAM TIGR00613 reco: DNA repair protein RecO 6 243 2.5E-66 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 SUPERFAMILY SSF57863 80 232 8.89E-37 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 Hamap MF_00201 DNA repair protein RecO [recO]. 2 243 23.724 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 SUPERFAMILY SSF50249 2 72 2.06E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0067 9e3f5505dc50880ba4b72f9bf9524582 251 Gene3D G3DSA:2.40.50.140 1 81 6.1E-6 T 14-10-2018 llmg_1633 c2aa070fd0b21acabea7b859660cae8b 281 SUPERFAMILY SSF54593 5 153 1.65E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1633 c2aa070fd0b21acabea7b859660cae8b 281 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 121 9.1E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_1633 c2aa070fd0b21acabea7b859660cae8b 281 Gene3D G3DSA:3.10.180.10 8 138 2.6E-21 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1633 c2aa070fd0b21acabea7b859660cae8b 281 SUPERFAMILY SSF54593 160 255 4.51E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1633 c2aa070fd0b21acabea7b859660cae8b 281 Gene3D G3DSA:3.10.180.10 154 279 4.3E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1485 2808c1bba181391fa96385a1309a47e2 192 Pfam PF06042 Nucleotidyltransferase 23 182 5.9E-48 T 14-10-2018 IPR009267 Putative nucleotidyltransferase llmg_1678 0aa07000b9da0f1c684df615a5d18fbd 329 ProSitePatterns PS01348 MraY family signature 2. 165 176 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1678 0aa07000b9da0f1c684df615a5d18fbd 329 Pfam PF00953 Glycosyl transferase family 4 85 245 3.0E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 llmg_1678 0aa07000b9da0f1c684df615a5d18fbd 329 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 20 324 9.5E-83 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1678 0aa07000b9da0f1c684df615a5d18fbd 329 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 4 327 21.58 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1678 0aa07000b9da0f1c684df615a5d18fbd 329 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 47 59 5.7E-4 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1055 4fe2c58b7dad1affb03b6214d52672d4 100 Gene3D G3DSA:1.10.260.40 10 99 1.0E-9 T 14-10-2018 llmg_1055 4fe2c58b7dad1affb03b6214d52672d4 100 SUPERFAMILY SSF47413 6 72 5.3E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1055 4fe2c58b7dad1affb03b6214d52672d4 100 SMART SM00530 11 65 2.3E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_0644 7950b35b37f79abe2d6d48bcb4e326b5 159 Pfam PF01757 Acyltransferase family 5 158 3.7E-13 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 llmg_2048 015e8a9f4f56b7d7de66ef4986439680 293 SUPERFAMILY SSF53383 4 293 3.89E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_2048 015e8a9f4f56b7d7de66ef4986439680 293 Gene3D G3DSA:3.40.640.10 3 174 1.3E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_2048 015e8a9f4f56b7d7de66ef4986439680 293 Gene3D G3DSA:3.90.1150.10 175 290 1.3E-89 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_2048 015e8a9f4f56b7d7de66ef4986439680 293 Pfam PF00266 Aminotransferase class-V 5 283 2.5E-51 T 14-10-2018 IPR000192 Aminotransferase class V domain llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 PIRSF PIRSF012524 1 284 9.9E-119 T 14-10-2018 IPR014464 Conserved virulence factor B llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 Gene3D G3DSA:2.40.50.330 2 69 4.2E-26 T 14-10-2018 llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 SMART SM00316 66 137 13.0 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 SMART SM00316 149 213 6.3E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 Gene3D G3DSA:1.10.10.10 221 283 4.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 Pfam PF13509 S1 domain 4 60 2.5E-12 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 Gene3D G3DSA:2.40.50.140 151 220 4.9E-20 T 14-10-2018 llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 Gene3D G3DSA:2.40.50.140 70 148 1.5E-31 T 14-10-2018 llmg_2282 58be8ff15a88452a7ca51ed3989db2b6 285 SUPERFAMILY SSF50249 147 216 1.8E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold llmg_0432 6253b6fd70ab9e2c55d210c2f0050e92 312 Pfam PF13280 WYL domain 140 306 6.8E-21 T 14-10-2018 IPR026881 WYL domain llmg_0432 6253b6fd70ab9e2c55d210c2f0050e92 312 SUPERFAMILY SSF46785 1 62 9.72E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_0432 6253b6fd70ab9e2c55d210c2f0050e92 312 Gene3D G3DSA:1.10.10.10 1 63 2.8E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0432 6253b6fd70ab9e2c55d210c2f0050e92 312 Pfam PF08279 HTH domain 6 61 1.0E-9 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 llmg_1643 ce0489b2b4f9956cd4980ddf146f27f3 414 Pfam PF01098 Cell cycle protein 21 387 3.6E-72 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1643 ce0489b2b4f9956cd4980ddf146f27f3 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 346 370 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 PIRSF PIRSF001434 1 362 7.8E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 SUPERFAMILY SSF53383 28 361 1.02E-93 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 Gene3D G3DSA:3.40.640.10 3 244 9.1E-72 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 Gene3D G3DSA:3.90.1150.10 278 362 7.3E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 Gene3D G3DSA:3.90.1150.10 245 277 1.2E-7 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_2181 ce5c7597f919ed3cd48bbfa5d32fb384 362 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 361 2.2E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 llmg_0417 2a7242cf9eb9cccc1548ef2900afb261 260 Pfam PF04468 PSP1 C-terminal conserved region 57 140 1.4E-19 T 14-10-2018 IPR007557 PSP1, C-terminal llmg_0161 2f49e00dafd1e183080612a804e0c561 182 SUPERFAMILY SSF46689 6 75 5.49E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0161 2f49e00dafd1e183080612a804e0c561 182 SUPERFAMILY SSF48498 78 171 4.36E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily llmg_0161 2f49e00dafd1e183080612a804e0c561 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0161 2f49e00dafd1e183080612a804e0c561 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.2E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0161 2f49e00dafd1e183080612a804e0c561 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 9.0E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0161 2f49e00dafd1e183080612a804e0c561 182 Gene3D G3DSA:1.10.357.10 4 176 2.9E-40 T 14-10-2018 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 Pfam PF01207 Dihydrouridine synthase (Dus) 23 322 3.1E-95 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 105 123 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 SUPERFAMILY SSF51395 20 331 8.61E-84 T 14-10-2018 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 Gene3D G3DSA:3.20.20.70 16 261 4.0E-75 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 PIRSF PIRSF006621 10 334 1.2E-98 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 13 331 1.2E-113 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 llmg_2209 6cb6adddebfb953fad293d7a23943b0f 334 Gene3D G3DSA:1.10.1200.80 265 334 1.6E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 llmg_1023 97f28a210dc2f00fe680669a5afae379 128 Gene3D G3DSA:1.10.10.10 2 78 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1023 97f28a210dc2f00fe680669a5afae379 128 SUPERFAMILY SSF46785 4 126 1.08E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily llmg_1023 97f28a210dc2f00fe680669a5afae379 128 Gene3D G3DSA:3.30.1490.190 79 126 1.0E-6 T 14-10-2018 llmg_1023 97f28a210dc2f00fe680669a5afae379 128 Pfam PF01475 Ferric uptake regulator family 12 124 2.8E-21 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 llmg_1322 c6304c28581a9567b74810365d01256d 398 SUPERFAMILY SSF103473 14 389 1.28E-37 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_1322 c6304c28581a9567b74810365d01256d 398 Gene3D G3DSA:1.20.1250.20 9 391 1.3E-36 T 14-10-2018 llmg_1322 c6304c28581a9567b74810365d01256d 398 Pfam PF07690 Major Facilitator Superfamily 17 351 6.4E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_2200 6380e73e25d69faa7446bab1025ade64 220 SUPERFAMILY SSF81296 29 207 1.06E-50 T 14-10-2018 IPR014756 Immunoglobulin E-set llmg_2200 6380e73e25d69faa7446bab1025ade64 220 Gene3D G3DSA:2.70.50.50 29 207 1.8E-68 T 14-10-2018 llmg_2200 6380e73e25d69faa7446bab1025ade64 220 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 29 204 7.1E-36 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal llmg_1447 2ae82ddd267c6dbb96651c268292a87c 209 Pfam PF06197 Protein of unknown function (DUF998) 13 195 4.8E-11 T 14-10-2018 IPR009339 Protein of unknown function DUF998 llmg_0914 301d390d60fe5aafa42127a491823e2b 388 Pfam PF03799 Cell division protein FtsQ 225 337 3.2E-9 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB llmg_0914 301d390d60fe5aafa42127a491823e2b 388 Hamap MF_00912 Cell division protein DivIB [divIB]. 68 351 30.388 T 14-10-2018 IPR026580 Cell division protein DivIB llmg_0914 301d390d60fe5aafa42127a491823e2b 388 Pfam PF08478 POTRA domain, FtsQ-type 149 220 3.6E-14 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type llmg_0914 301d390d60fe5aafa42127a491823e2b 388 Gene3D G3DSA:3.40.50.10960 217 333 1.6E-24 T 14-10-2018 llmg_0211 695550340643580b20242b6062ab0af0 402 Pfam PF09314 Domain of unknown function (DUF1972) 3 190 3.1E-98 T 14-10-2018 IPR015393 Domain of unknown function DUF1972 llmg_0211 695550340643580b20242b6062ab0af0 402 Gene3D G3DSA:3.40.50.2000 6 196 5.5E-11 T 14-10-2018 llmg_0211 695550340643580b20242b6062ab0af0 402 SUPERFAMILY SSF53756 6 378 1.41E-30 T 14-10-2018 llmg_0211 695550340643580b20242b6062ab0af0 402 Gene3D G3DSA:3.40.50.2000 197 379 2.5E-13 T 14-10-2018 llmg_1391 d6a6605943bb8ec6c802dfba213a4db8 748 Gene3D G3DSA:3.40.50.300 396 722 7.5E-49 T 14-10-2018 llmg_1391 d6a6605943bb8ec6c802dfba213a4db8 748 SUPERFAMILY SSF52540 363 729 3.19E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1391 d6a6605943bb8ec6c802dfba213a4db8 748 Gene3D G3DSA:1.10.8.730 469 585 7.5E-49 T 14-10-2018 llmg_1391 d6a6605943bb8ec6c802dfba213a4db8 748 Pfam PF01935 Domain of unknown function DUF87 398 487 4.8E-10 T 14-10-2018 IPR002789 Helicase HerA, central domain llmg_0065 cabd7c8a9045546a6a52d91df1b060f5 173 Pfam PF13527 Acetyltransferase (GNAT) domain 3 131 9.8E-8 T 14-10-2018 llmg_0065 cabd7c8a9045546a6a52d91df1b060f5 173 Gene3D G3DSA:3.40.630.30 1 173 2.5E-38 T 14-10-2018 llmg_0065 cabd7c8a9045546a6a52d91df1b060f5 173 SUPERFAMILY SSF55729 1 138 1.62E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2386 ea1034f5decc18148bb328c22e0f683e 429 Pfam PF01554 MatE 229 388 4.0E-21 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_2386 ea1034f5decc18148bb328c22e0f683e 429 Pfam PF01554 MatE 13 173 3.4E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_2386 ea1034f5decc18148bb328c22e0f683e 429 TIGRFAM TIGR00797 matE: MATE efflux family protein 13 403 1.1E-61 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_2386 ea1034f5decc18148bb328c22e0f683e 429 PIRSF PIRSF006603 2 428 1.5E-75 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 llmg_1979 0b3ddacaaa9832cd283142fe5ce28f9d 228 Gene3D G3DSA:1.10.3720.10 1 226 6.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1979 0b3ddacaaa9832cd283142fe5ce28f9d 228 SUPERFAMILY SSF161098 12 214 1.06E-42 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1979 0b3ddacaaa9832cd283142fe5ce28f9d 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 117 9.2E-21 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 llmg_1979 0b3ddacaaa9832cd283142fe5ce28f9d 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 222 3.0E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_2399 297038d75a1414d904c7984e2e2810da 245 SUPERFAMILY SSF52540 3 220 1.19E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2399 297038d75a1414d904c7984e2e2810da 245 SMART SM00382 28 215 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain llmg_2399 297038d75a1414d904c7984e2e2810da 245 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 llmg_2399 297038d75a1414d904c7984e2e2810da 245 Pfam PF00005 ABC transporter 19 165 6.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 llmg_2399 297038d75a1414d904c7984e2e2810da 245 Gene3D G3DSA:3.40.50.300 2 244 6.3E-59 T 14-10-2018 llmg_0463 bce730f5f0ad2e1e3d3b95580d32853d 262 SUPERFAMILY SSF53613 9 256 4.99E-60 T 14-10-2018 IPR029056 Ribokinase-like llmg_0463 bce730f5f0ad2e1e3d3b95580d32853d 262 Gene3D G3DSA:3.40.1190.20 7 261 4.5E-73 T 14-10-2018 IPR029056 Ribokinase-like llmg_0463 bce730f5f0ad2e1e3d3b95580d32853d 262 Pfam PF08543 Phosphomethylpyrimidine kinase 19 256 4.7E-65 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 llmg_0312 6f6afbb0bad828efd46e94d52943fa0a 349 Gene3D G3DSA:3.40.190.10 155 281 2.5E-19 T 14-10-2018 llmg_0312 6f6afbb0bad828efd46e94d52943fa0a 349 Gene3D G3DSA:3.40.190.10 45 317 2.5E-19 T 14-10-2018 llmg_0312 6f6afbb0bad828efd46e94d52943fa0a 349 SUPERFAMILY SSF53850 64 336 7.77E-13 T 14-10-2018 llmg_0312 6f6afbb0bad828efd46e94d52943fa0a 349 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 44 335 7.2E-58 T 14-10-2018 llmg_0427 2e85b4f0a91062f4892aae0e1e2e97cc 329 SUPERFAMILY SSF55060 194 323 5.52E-18 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily llmg_0427 2e85b4f0a91062f4892aae0e1e2e97cc 329 SUPERFAMILY SSF54211 8 211 1.52E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold llmg_0427 2e85b4f0a91062f4892aae0e1e2e97cc 329 Pfam PF08544 GHMP kinases C terminal 236 317 1.2E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain llmg_0427 2e85b4f0a91062f4892aae0e1e2e97cc 329 Gene3D G3DSA:3.30.230.10 3 221 5.7E-43 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup llmg_0427 2e85b4f0a91062f4892aae0e1e2e97cc 329 Pfam PF00288 GHMP kinases N terminal domain 111 180 2.8E-15 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 llmg_0457 3aa5f95e074d51bd521b0f197130bcf2 255 Pfam PF00326 Prolyl oligopeptidase family 59 224 2.3E-10 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 llmg_0457 3aa5f95e074d51bd521b0f197130bcf2 255 Gene3D G3DSA:3.40.50.1820 1 255 7.2E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0457 3aa5f95e074d51bd521b0f197130bcf2 255 SUPERFAMILY SSF53474 25 247 8.11E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0115 c7dc982e872f46c0b1c4b6196a369ae4 151 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 33.242 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 llmg_0115 c7dc982e872f46c0b1c4b6196a369ae4 151 SUPERFAMILY SSF69500 1 144 1.96E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily llmg_0115 c7dc982e872f46c0b1c4b6196a369ae4 151 Gene3D G3DSA:3.50.80.10 1 144 2.9E-58 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily llmg_0115 c7dc982e872f46c0b1c4b6196a369ae4 151 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 3.7E-54 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 llmg_0115 c7dc982e872f46c0b1c4b6196a369ae4 151 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 7.6E-57 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 llmg_0069 3a311301fde302024f4e8383b5f0199c 293 SUPERFAMILY SSF47413 3 75 6.22E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_0069 3a311301fde302024f4e8383b5f0199c 293 Gene3D G3DSA:1.10.260.40 1 75 4.2E-6 T 14-10-2018 llmg_0069 3a311301fde302024f4e8383b5f0199c 293 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 72 288 3.0E-26 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_0069 3a311301fde302024f4e8383b5f0199c 293 Pfam PF12844 Helix-turn-helix domain 7 73 8.7E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 llmg_2407 8918e8e1594a22044913b262f028427d 362 Pfam PF00482 Type II secretion system (T2SS), protein F 46 164 7.6E-10 T 14-10-2018 IPR018076 Type II secretion system F domain llmg_2407 8918e8e1594a22044913b262f028427d 362 Pfam PF00482 Type II secretion system (T2SS), protein F 232 353 8.8E-16 T 14-10-2018 IPR018076 Type II secretion system F domain llmg_2407 8918e8e1594a22044913b262f028427d 362 Gene3D G3DSA:1.20.81.30 34 141 6.8E-9 T 14-10-2018 llmg_2407 8918e8e1594a22044913b262f028427d 362 Gene3D G3DSA:1.20.81.30 215 321 9.9E-9 T 14-10-2018 llmg_2407 8918e8e1594a22044913b262f028427d 362 PRINTS PR00812 Bacterial general secretion pathway protein F signature 342 361 4.6E-6 T 14-10-2018 IPR003004 GspF/PilC family llmg_2407 8918e8e1594a22044913b262f028427d 362 PRINTS PR00812 Bacterial general secretion pathway protein F signature 136 164 4.6E-6 T 14-10-2018 IPR003004 GspF/PilC family llmg_2407 8918e8e1594a22044913b262f028427d 362 PRINTS PR00812 Bacterial general secretion pathway protein F signature 326 340 4.6E-6 T 14-10-2018 IPR003004 GspF/PilC family llmg_0988 06556f140ebdb805d0db8ed16fb17632 182 SUPERFAMILY SSF53328 1 178 4.32E-45 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_0988 06556f140ebdb805d0db8ed16fb17632 182 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 180 25.584 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 llmg_0988 06556f140ebdb805d0db8ed16fb17632 182 Gene3D G3DSA:3.40.50.170 1 179 1.9E-61 T 14-10-2018 llmg_0988 06556f140ebdb805d0db8ed16fb17632 182 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 179 4.8E-54 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 llmg_0988 06556f140ebdb805d0db8ed16fb17632 182 Pfam PF00551 Formyl transferase 1 174 3.5E-43 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 llmg_2164 752d519c79f5fce450598bb5bd445361 370 PIRSF PIRSF012569 1 364 1.3E-104 T 14-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 llmg_2164 752d519c79f5fce450598bb5bd445361 370 Pfam PF13349 Putative adhesin 115 312 3.0E-14 T 14-10-2018 IPR025164 Putative adhesin llmg_1768 13be2f4f8fd4d4b491877890fb3d2637 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 115 1.3E-30 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR llmg_1768 13be2f4f8fd4d4b491877890fb3d2637 116 Pfam PF03960 ArsC family 5 116 5.4E-14 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_1768 13be2f4f8fd4d4b491877890fb3d2637 116 Gene3D G3DSA:3.40.30.10 1 116 9.0E-43 T 14-10-2018 llmg_1768 13be2f4f8fd4d4b491877890fb3d2637 116 SUPERFAMILY SSF52833 3 116 1.02E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_0875 5ff21bf3ce2de89a33330d262478c60b 223 PRINTS PR01837 MgtC/SapB protein signature 98 122 5.3E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 llmg_0875 5ff21bf3ce2de89a33330d262478c60b 223 PRINTS PR01837 MgtC/SapB protein signature 18 37 5.3E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 llmg_0875 5ff21bf3ce2de89a33330d262478c60b 223 PRINTS PR01837 MgtC/SapB protein signature 37 55 5.3E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 llmg_0875 5ff21bf3ce2de89a33330d262478c60b 223 PRINTS PR01837 MgtC/SapB protein signature 71 93 5.3E-44 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 llmg_0875 5ff21bf3ce2de89a33330d262478c60b 223 Pfam PF02308 MgtC family 15 141 1.1E-35 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 llmg_0430 cce68d17a1263dfd889569ac05b71c2b 784 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 538 668 1.2E-26 T 14-10-2018 IPR025299 CstA, C-terminal domain llmg_0430 cce68d17a1263dfd889569ac05b71c2b 784 Pfam PF02554 Carbon starvation protein CstA 81 451 3.9E-150 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 llmg_1155 16cfafddc182ef69db1e607a45ed702b 123 Gene3D G3DSA:3.40.30.10 1 123 2.5E-28 T 14-10-2018 llmg_1155 16cfafddc182ef69db1e607a45ed702b 123 SUPERFAMILY SSF52833 1 121 2.31E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily llmg_1155 16cfafddc182ef69db1e607a45ed702b 123 Pfam PF03960 ArsC family 34 117 1.0E-18 T 14-10-2018 IPR006660 Arsenate reductase-like llmg_1257 dc105e4c3a6b4939712b91f6e1616fb4 79 Pfam PF04226 Transglycosylase associated protein 31 75 3.3E-12 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 llmg_0165 5bb1f9043992f3ab2dea21e766deeba9 229 Pfam PF06161 Protein of unknown function (DUF975) 1 145 5.5E-8 T 14-10-2018 IPR010380 Protein of unknown function DUF975 llmg_0165 5bb1f9043992f3ab2dea21e766deeba9 229 Pfam PF06161 Protein of unknown function (DUF975) 123 227 2.4E-16 T 14-10-2018 IPR010380 Protein of unknown function DUF975 llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.1E-53 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 1.5E-49 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 Gene3D G3DSA:3.40.1280.10 1 159 3.0E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 PIRSF PIRSF004505 1 159 1.1E-48 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 28.314 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 llmg_2418 2b1d30dc7f2fc3b7e709fa16a9d1570b 159 SUPERFAMILY SSF75217 1 157 1.2E-53 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases llmg_2445 d4f4dc8400dc6766c62b8ad160a81557 405 SUPERFAMILY SSF103473 11 397 9.94E-40 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_2445 d4f4dc8400dc6766c62b8ad160a81557 405 Pfam PF07690 Major Facilitator Superfamily 16 365 9.6E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_2445 d4f4dc8400dc6766c62b8ad160a81557 405 Gene3D G3DSA:1.20.1250.20 13 401 5.8E-37 T 14-10-2018 llmg_0056 a5a4b208a4f25726d299be44c355c07c 260 Gene3D G3DSA:3.40.50.1820 25 260 3.1E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0056 a5a4b208a4f25726d299be44c355c07c 260 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 21 260 4.2E-52 T 14-10-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like llmg_0056 a5a4b208a4f25726d299be44c355c07c 260 SUPERFAMILY SSF53474 27 217 2.75E-10 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_2102 4da0efcabd8f474989b590edc94c7122 132 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 13 128 2.8E-23 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family llmg_2102 4da0efcabd8f474989b590edc94c7122 132 Pfam PF05119 Phage terminase, small subunit 21 110 1.1E-17 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family llmg_2283 b36492fc21db7cb92525ddc962d3648b 152 Pfam PF00583 Acetyltransferase (GNAT) family 43 130 5.2E-8 T 14-10-2018 IPR000182 GNAT domain llmg_2283 b36492fc21db7cb92525ddc962d3648b 152 Gene3D G3DSA:3.40.630.30 2 138 1.5E-13 T 14-10-2018 llmg_2283 b36492fc21db7cb92525ddc962d3648b 152 SUPERFAMILY SSF55729 18 148 1.29E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1311 8aa761488cdb83cbf6df99633e566bf4 390 Pfam PF01594 AI-2E family transporter 40 366 5.5E-76 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like llmg_1103 6e1d9f472eeec6686c3b82fec48d297b 403 Pfam PF13421 SPFH domain-Band 7 family 56 270 3.5E-21 T 14-10-2018 IPR033880 SPFH domain, YdjI-like llmg_0191 72ceee2859fb0ba666459ac6ceef8b0a 150 SUPERFAMILY SSF51283 1 149 7.2E-36 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_0191 72ceee2859fb0ba666459ac6ceef8b0a 150 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 149 3.3E-30 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 llmg_0191 72ceee2859fb0ba666459ac6ceef8b0a 150 Pfam PF00692 dUTPase 18 149 4.7E-17 T 14-10-2018 IPR029054 dUTPase-like llmg_0191 72ceee2859fb0ba666459ac6ceef8b0a 150 Gene3D G3DSA:2.70.40.10 1 132 1.3E-44 T 14-10-2018 IPR036157 dUTPase-like superfamily llmg_1819 a9eacd78c129ce0c9f29eae877d2d3f3 287 Pfam PF01734 Patatin-like phospholipase 10 197 1.1E-10 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 llmg_1819 a9eacd78c129ce0c9f29eae877d2d3f3 287 SUPERFAMILY SSF52151 2 272 1.02E-26 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase llmg_1819 a9eacd78c129ce0c9f29eae877d2d3f3 287 Gene3D G3DSA:3.40.1090.10 64 263 3.0E-18 T 14-10-2018 llmg_0150 421031bb3a5be8b057c44af70791d437 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 1.1E-34 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 llmg_0150 421031bb3a5be8b057c44af70791d437 88 Hamap MF_01507 UPF0297 protein . 1 84 27.077 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 llmg_0150 421031bb3a5be8b057c44af70791d437 88 PIRSF PIRSF037258 1 87 5.3E-43 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 llmg_2335 4ebb026b5fbf191673ef564ac0e04688 307 SMART SM00014 167 293 7.3E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase llmg_2335 4ebb026b5fbf191673ef564ac0e04688 307 Pfam PF01569 PAP2 superfamily 172 296 7.1E-20 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase llmg_2335 4ebb026b5fbf191673ef564ac0e04688 307 Gene3D G3DSA:1.20.144.10 99 302 3.7E-15 T 14-10-2018 llmg_2335 4ebb026b5fbf191673ef564ac0e04688 307 SUPERFAMILY SSF48317 88 298 1.03E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily llmg_2338 1279cff0ce5078d0b3a4e25a430560b8 112 Pfam PF06304 Protein of unknown function (DUF1048) 13 111 1.0E-29 T 14-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 llmg_2338 1279cff0ce5078d0b3a4e25a430560b8 112 SUPERFAMILY SSF158560 6 110 8.24E-25 T 14-10-2018 llmg_2338 1279cff0ce5078d0b3a4e25a430560b8 112 Gene3D G3DSA:1.10.1900.10 4 112 7.2E-28 T 14-10-2018 llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 Gene3D G3DSA:1.20.272.10 207 334 5.3E-27 T 14-10-2018 llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 Gene3D G3DSA:3.40.50.300 3 142 4.9E-21 T 14-10-2018 llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 Pfam PF06144 DNA polymerase III, delta subunit 20 187 1.2E-39 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 329 4.7E-58 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 SUPERFAMILY SSF52540 8 206 3.29E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_0768 3b87957842ffc76e0ba4c16a4c3e7550 334 SUPERFAMILY SSF48019 211 329 1.11E-19 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 SUPERFAMILY SSF46689 1 76 8.78E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 SUPERFAMILY SSF53697 94 252 4.06E-37 T 14-10-2018 llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 Gene3D G3DSA:1.10.10.10 2 75 4.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 2.5E-23 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 Gene3D G3DSA:3.40.50.10490 90 269 2.0E-40 T 14-10-2018 llmg_1316 b6fb1af01e05e1828376b44c15f4d640 273 Pfam PF01380 SIS domain 119 245 2.4E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 Pfam PF00106 short chain dehydrogenase 4 195 2.1E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 Gene3D G3DSA:3.40.50.720 3 237 3.8E-43 T 14-10-2018 llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 SUPERFAMILY SSF51735 3 235 5.72E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 5.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0154 0f952c0a56680f4b4c65957870ceaf83 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.4E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_2113 bc9ed017aa57a5f794c1e7ac6450e197 112 Pfam PF06600 Protein of unknown function (DUF1140) 7 104 9.3E-46 T 14-10-2018 IPR009520 Protein of unknown function DUF1140 llmg_0788 5c316eddb7b9aadbc834a4ac0f6d26b3 315 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 305 1.1E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 llmg_0561 9a066367e01681228978daf8155e8f7f 154 SUPERFAMILY SSF55729 20 135 2.09E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0561 9a066367e01681228978daf8155e8f7f 154 Gene3D G3DSA:3.40.630.30 2 154 5.3E-30 T 14-10-2018 llmg_0561 9a066367e01681228978daf8155e8f7f 154 Pfam PF00583 Acetyltransferase (GNAT) family 34 118 9.2E-12 T 14-10-2018 IPR000182 GNAT domain llmg_2424 da7a036d14d795616dbcc9528cbdee41 250 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 120 126 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 llmg_2424 da7a036d14d795616dbcc9528cbdee41 250 Gene3D G3DSA:3.40.50.150 10 250 1.8E-60 T 14-10-2018 llmg_2424 da7a036d14d795616dbcc9528cbdee41 250 SUPERFAMILY SSF53335 17 201 2.39E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2424 da7a036d14d795616dbcc9528cbdee41 250 Pfam PF05175 Methyltransferase small domain 34 174 1.9E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 llmg_0229 28ccb7efd7983936d5c9fbf84b06adfe 432 Pfam PF01183 Glycosyl hydrolases family 25 95 271 1.4E-30 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 llmg_0229 28ccb7efd7983936d5c9fbf84b06adfe 432 SMART SM00641 92 193 2.6E-4 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup llmg_0229 28ccb7efd7983936d5c9fbf84b06adfe 432 SUPERFAMILY SSF51445 95 290 8.42E-32 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0229 28ccb7efd7983936d5c9fbf84b06adfe 432 Gene3D G3DSA:3.20.20.80 80 302 8.2E-31 T 14-10-2018 llmg_1111 a68f56dcae128fde6aed3823b25e16cc 176 PIRSF PIRSF027391 1 175 8.2E-50 T 14-10-2018 IPR014535 Predicted heptaprenyl diphosphate synthase, component I llmg_1111 a68f56dcae128fde6aed3823b25e16cc 176 Pfam PF07456 Heptaprenyl diphosphate synthase component I 12 157 1.1E-44 T 14-10-2018 IPR010898 Heptaprenyl diphosphate synthase component I llmg_1111 a68f56dcae128fde6aed3823b25e16cc 176 Gene3D G3DSA:1.10.1760.20 1 169 6.4E-8 T 14-10-2018 llmg_1037 01bcf01395142348520e64840e027d3a 122 SUPERFAMILY SSF54593 2 119 1.33E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1037 01bcf01395142348520e64840e027d3a 122 Gene3D G3DSA:3.10.180.10 1 119 9.0E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1037 01bcf01395142348520e64840e027d3a 122 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 114 1.0E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_0219 6d47bc77b360caa438bee005279e6d2b 117 Pfam PF10066 Uncharacterized conserved protein (DUF2304) 5 108 6.8E-26 T 14-10-2018 IPR019277 Protein of unknown function DUF2304 llmg_0262 fa02ca45ea60ea7f6801544471d5ebcc 380 Pfam PF01061 ABC-2 type transporter 169 341 4.9E-35 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_1723 f7b88eaac00f810964524f9d1daa9ae9 483 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 4 26 1.9E-5 T 14-10-2018 IPR022263 KxYKxGKxW signal peptide llmg_1723 f7b88eaac00f810964524f9d1daa9ae9 483 Pfam PF11966 Fibronectin-binding repeat 259 338 4.7E-24 T 14-10-2018 IPR021021 Fibronectin-binding repeat, SSURE llmg_1723 f7b88eaac00f810964524f9d1daa9ae9 483 Pfam PF11966 Fibronectin-binding repeat 119 197 1.3E-24 T 14-10-2018 IPR021021 Fibronectin-binding repeat, SSURE llmg_1837 5d95829031b9390b6b678b3ec89672d3 213 Pfam PF04854 Protein of unknown function, DUF624 24 96 1.1E-13 T 14-10-2018 IPR006938 Protein of unknown function DUF624 llmg_0600 13d766a955b2c476090c32d925741fdf 312 SUPERFAMILY SSF53448 3 241 3.94E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_0600 13d766a955b2c476090c32d925741fdf 312 Pfam PF00535 Glycosyl transferase family 2 7 169 1.2E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_0600 13d766a955b2c476090c32d925741fdf 312 Gene3D G3DSA:3.90.550.10 3 192 3.4E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 Gene3D G3DSA:1.20.58.1890 1 69 7.6E-26 T 14-10-2018 llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 ProSitePatterns PS00579 Ribosomal protein L29 signature. 46 60 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 Pfam PF00831 Ribosomal L29 protein 11 66 2.4E-22 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 12 66 8.1E-21 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 SUPERFAMILY SSF46561 11 66 8.11E-19 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2375 d5fafda1cbbd2e294f6f7f05961397fd 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 6 67 16.769 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2213 b32969168581b33de60a3196f94c1918 291 PIRSF PIRSF006483 1 284 3.1E-79 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_2213 b32969168581b33de60a3196f94c1918 291 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 13 218 2.5E-59 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT llmg_2213 b32969168581b33de60a3196f94c1918 291 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 277 1.2E-19 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 llmg_2213 b32969168581b33de60a3196f94c1918 291 Gene3D G3DSA:3.30.70.120 194 269 5.5E-21 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal llmg_1602 f456f0bd1afa80d47deed0165505c580 276 Gene3D G3DSA:1.10.260.150 29 276 4.0E-25 T 14-10-2018 llmg_1602 f456f0bd1afa80d47deed0165505c580 276 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 198 3.0E-14 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain llmg_1519 e58cd4420a811108da5879fed9a08cce 171 Pfam PF09900 Predicted membrane protein (DUF2127) 15 149 1.5E-23 T 14-10-2018 IPR021125 Protein of unknown function DUF2127 llmg_1519 e58cd4420a811108da5879fed9a08cce 171 PIRSF PIRSF034455 1 159 7.8E-61 T 14-10-2018 IPR014591 Uncharacterised conserved protein UCP034455 llmg_1492 95c73820bf55358dddf28eed425795c3 111 Pfam PF04327 Cysteine protease Prp 1 102 1.2E-23 T 14-10-2018 IPR007422 Cysteine protease Prp llmg_1492 95c73820bf55358dddf28eed425795c3 111 SUPERFAMILY SSF118010 1 107 7.33E-30 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily llmg_1492 95c73820bf55358dddf28eed425795c3 111 Gene3D G3DSA:3.30.70.1490 1 108 1.5E-31 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily llmg_0130 9bace555fa9f7ada7f58c30e895f9e65 314 SUPERFAMILY SSF53474 64 312 4.4E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0130 9bace555fa9f7ada7f58c30e895f9e65 314 Gene3D G3DSA:3.40.50.1820 66 313 4.9E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0130 9bace555fa9f7ada7f58c30e895f9e65 314 Pfam PF12146 Serine aminopeptidase, S33 89 179 1.3E-10 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 llmg_0348 96e5be336f5d56f91a593f490514d2e1 312 Pfam PF01032 FecCD transport family 19 311 7.6E-74 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 llmg_0348 96e5be336f5d56f91a593f490514d2e1 312 Gene3D G3DSA:1.10.3470.10 2 312 9.1E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_0348 96e5be336f5d56f91a593f490514d2e1 312 SUPERFAMILY SSF81345 5 311 1.01E-65 T 14-10-2018 IPR037294 ABC transporter, BtuC-like llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 PRINTS PR01438 Universal stress protein signature 122 144 1.8E-17 T 14-10-2018 IPR006015 Universal stress protein A llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 PRINTS PR01438 Universal stress protein signature 104 116 1.8E-17 T 14-10-2018 IPR006015 Universal stress protein A llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 PRINTS PR01438 Universal stress protein signature 5 23 1.8E-17 T 14-10-2018 IPR006015 Universal stress protein A llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 Pfam PF00582 Universal stress protein family 5 144 1.8E-33 T 14-10-2018 IPR006016 UspA llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 SUPERFAMILY SSF52402 5 144 4.44E-30 T 14-10-2018 llmg_2514 37255e765e7b5a3551b03baae1d345c4 145 Gene3D G3DSA:3.40.50.620 1 145 4.5E-34 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold llmg_2350 ea99cd706989490277f9a6bf0bbd8ac6 319 Pfam PF00535 Glycosyl transferase family 2 7 142 1.2E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_2350 ea99cd706989490277f9a6bf0bbd8ac6 319 Gene3D G3DSA:3.90.550.10 5 206 3.1E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2350 ea99cd706989490277f9a6bf0bbd8ac6 319 SUPERFAMILY SSF53448 5 219 3.02E-51 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1629 a4d50331352bb4738e94406c4515a7da 245 Pfam PF08241 Methyltransferase domain 47 141 4.5E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 llmg_1629 a4d50331352bb4738e94406c4515a7da 245 Gene3D G3DSA:3.40.50.150 26 243 7.5E-70 T 14-10-2018 llmg_1629 a4d50331352bb4738e94406c4515a7da 245 SUPERFAMILY SSF53335 8 242 3.72E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_1624 d57cd901f43dfd13aeed1ff57ed7b622 302 PIRSF PIRSF031512 1 302 3.4E-136 T 14-10-2018 IPR014565 Exopolysaccharide biosynthesis, EpsL, firmicutes llmg_1624 d57cd901f43dfd13aeed1ff57ed7b622 302 Pfam PF09992 Phosphodiester glycosidase 141 301 6.5E-22 T 14-10-2018 IPR018711 Phosphodiester glycosidase llmg_2461 68ba7b0dd22782e1e3d36e2a0a7ab7d0 173 Pfam PF00583 Acetyltransferase (GNAT) family 34 148 1.8E-6 T 14-10-2018 IPR000182 GNAT domain llmg_2461 68ba7b0dd22782e1e3d36e2a0a7ab7d0 173 SUPERFAMILY SSF55729 5 158 8.65E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_2461 68ba7b0dd22782e1e3d36e2a0a7ab7d0 173 Gene3D G3DSA:3.40.630.30 1 169 7.8E-46 T 14-10-2018 llmg_1486 921f9c311fe1b16d9f14dc811ce15bd8 151 Pfam PF01219 Prokaryotic diacylglycerol kinase 41 142 9.8E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 llmg_1486 921f9c311fe1b16d9f14dc811ce15bd8 151 Gene3D G3DSA:1.10.3830.10 28 146 1.9E-38 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 PRINTS PR00783 Major intrinsic protein family signature 85 104 8.2E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 PRINTS PR00783 Major intrinsic protein family signature 149 167 8.2E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 PRINTS PR00783 Major intrinsic protein family signature 267 287 8.2E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 PRINTS PR00783 Major intrinsic protein family signature 7 26 8.2E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 PRINTS PR00783 Major intrinsic protein family signature 216 238 8.2E-28 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 ProSitePatterns PS00221 MIP family signature. 66 74 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 Gene3D G3DSA:1.20.1080.10 194 289 2.9E-20 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 Gene3D G3DSA:1.20.1080.10 2 178 8.7E-34 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 SUPERFAMILY SSF81338 5 288 7.59E-50 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 Pfam PF00230 Major intrinsic protein 7 165 1.5E-19 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_2327 0bbb40ba26dbb3689df9a57053aa7691 289 Pfam PF00230 Major intrinsic protein 206 281 9.6E-9 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 375 383 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 SUPERFAMILY SSF51445 5 479 1.81E-156 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 307 321 6.8E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 396 407 6.8E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 375 383 6.8E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 418 435 6.8E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 443 455 6.8E-18 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 Pfam PF00232 Glycosyl hydrolase family 1 5 478 7.9E-126 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_1455 0b98829de2be7d83e5477ff21d8b1ed5 480 Gene3D G3DSA:3.20.20.80 2 480 9.7E-157 T 14-10-2018 llmg_0054 93e42b06671d4a2267633a77a505dd6b 101 Pfam PF08951 Enterocin A Immunity 13 77 2.6E-15 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_1189 8fc84850eeb4a05e04f1648933673497 167 SUPERFAMILY SSF56300 2 164 1.4E-44 T 14-10-2018 llmg_1189 8fc84850eeb4a05e04f1648933673497 167 Gene3D G3DSA:3.60.21.10 1 167 2.7E-46 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like llmg_1189 8fc84850eeb4a05e04f1648933673497 167 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 149 3.5E-26 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 llmg_1189 8fc84850eeb4a05e04f1648933673497 167 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 145 6.4E-25 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 llmg_2131 981ac16e131e9329c360590ea3d97cf1 159 Pfam PF10711 Hypothetical protein (DUF2513) 36 138 6.8E-24 T 14-10-2018 IPR019650 Protein of unknown function DUF2513 llmg_2417 0e69878ef88be26876f2f65c51fac156 232 SUPERFAMILY SSF48371 8 232 1.47E-47 T 14-10-2018 IPR016024 Armadillo-type fold llmg_2417 0e69878ef88be26876f2f65c51fac156 232 Gene3D G3DSA:1.25.10.90 1 232 8.3E-75 T 14-10-2018 llmg_2417 0e69878ef88be26876f2f65c51fac156 232 Pfam PF08713 DNA alkylation repair enzyme 4 232 7.2E-74 T 14-10-2018 IPR014825 DNA alkylation repair enzyme llmg_1523 d7ee9718384d386552734fbee8014d82 147 Pfam PF02681 Divergent PAP2 family 9 142 2.5E-50 T 14-10-2018 IPR003832 Protein of unknown function DUF212 llmg_0705 7f47d77f4e314720fb23d5dd1f35f53a 107 Pfam PF08951 Enterocin A Immunity 13 80 6.5E-9 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_2020 93348b9ff50fe353d07816e08e4e185b 147 SUPERFAMILY SSF54403 108 145 8.5E-5 T 14-10-2018 llmg_2020 93348b9ff50fe353d07816e08e4e185b 147 SUPERFAMILY SSF54403 39 102 2.13E-10 T 14-10-2018 llmg_0024 180476bb30258bbaf2b432d284c488a0 143 Gene3D G3DSA:3.40.930.10 1 143 1.4E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_0024 180476bb30258bbaf2b432d284c488a0 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 143 2.4E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain llmg_0024 180476bb30258bbaf2b432d284c488a0 143 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 46 62 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain llmg_0024 180476bb30258bbaf2b432d284c488a0 143 SUPERFAMILY SSF55804 3 143 9.68E-37 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 llmg_1115 f54ed4a0eab1c953e86646501b10bc8c 208 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 14 206 6.9E-44 T 14-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein llmg_1960 8e3c94c6209520d7da32a9ced54b67da 392 Pfam PF03600 Citrate transporter 32 321 3.0E-19 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 llmg_1053 723657d6fee8645a51d00590a8327874 68 Pfam PF11922 Domain of unknown function (DUF3440) 10 67 6.3E-23 T 14-10-2018 IPR021845 Protein of unknown function DUF3440 llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 2.5E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 Gene3D G3DSA:3.40.50.720 1 255 6.3E-58 T 14-10-2018 llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 Pfam PF00106 short chain dehydrogenase 2 177 2.7E-45 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 SUPERFAMILY SSF51735 1 197 6.41E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 1.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 1.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_0087 4716dc22a384fb73cb55b96d74364f9b 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 1.5E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 SUPERFAMILY SSF54631 16 136 3.54E-24 T 14-10-2018 llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 Gene3D G3DSA:3.10.580.10 1 152 2.4E-44 T 14-10-2018 llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 SMART SM00116 92 137 1.4 T 14-10-2018 IPR000644 CBS domain llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 SMART SM00116 23 71 3.2 T 14-10-2018 IPR000644 CBS domain llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 Pfam PF00571 CBS domain 86 136 2.6E-4 T 14-10-2018 IPR000644 CBS domain llmg_1190 1746e847e071fd8a9d23bd126fb83ed8 153 Pfam PF00571 CBS domain 20 70 4.6E-5 T 14-10-2018 IPR000644 CBS domain llmg_1471 07d28b950b0d8a622ae6342985340d0c 162 Gene3D G3DSA:3.40.630.30 1 161 4.6E-31 T 14-10-2018 llmg_1471 07d28b950b0d8a622ae6342985340d0c 162 SUPERFAMILY SSF55729 1 161 3.43E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1471 07d28b950b0d8a622ae6342985340d0c 162 Pfam PF00583 Acetyltransferase (GNAT) family 33 135 2.9E-13 T 14-10-2018 IPR000182 GNAT domain llmg_1164 2d286747467fb30c14a67b3992b423bf 319 Gene3D G3DSA:1.10.3720.10 62 313 2.4E-57 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1164 2d286747467fb30c14a67b3992b423bf 319 SUPERFAMILY SSF161098 18 308 7.06E-52 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1164 2d286747467fb30c14a67b3992b423bf 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 300 6.6E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1983 434a634fb18097e53e30dc6eba82aa4d 199 Pfam PF06018 CodY GAF-like domain 3 180 8.8E-46 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 llmg_1983 434a634fb18097e53e30dc6eba82aa4d 199 Gene3D G3DSA:3.30.450.40 2 163 1.1E-24 T 14-10-2018 IPR029016 GAF-like domain superfamily llmg_1113 86bc3353d08a7b541686c0120677c15b 313 Pfam PF00483 Nucleotidyl transferase 15 273 4.3E-33 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 llmg_1113 86bc3353d08a7b541686c0120677c15b 313 Gene3D G3DSA:3.90.550.10 5 304 4.0E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1113 86bc3353d08a7b541686c0120677c15b 313 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 13 276 3.2E-111 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 llmg_1113 86bc3353d08a7b541686c0120677c15b 313 SUPERFAMILY SSF53448 10 280 3.6E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1409 a7da8a00b915e495af12970411c1b3f3 289 Gene3D G3DSA:3.40.50.300 1 288 6.3E-34 T 14-10-2018 llmg_1409 a7da8a00b915e495af12970411c1b3f3 289 SUPERFAMILY SSF52540 15 191 6.3E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1409 a7da8a00b915e495af12970411c1b3f3 289 Pfam PF13614 AAA domain 11 183 1.1E-23 T 14-10-2018 IPR025669 AAA domain llmg_0814 6587a90afab8ee75f09aa6c205fde8ec 68 Pfam PF06563 Protein of unknown function (DUF1125) 14 68 1.7E-13 T 14-10-2018 IPR009503 Protein of unknown function DUF1125 llmg_1252 5a6bbc659ce49d6709d18914ce666935 133 SMART SM00422 2 71 1.4E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1252 5a6bbc659ce49d6709d18914ce666935 133 Gene3D G3DSA:1.10.1660.10 1 116 5.1E-27 T 14-10-2018 llmg_1252 5a6bbc659ce49d6709d18914ce666935 133 Pfam PF13411 MerR HTH family regulatory protein 2 69 8.3E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 llmg_1252 5a6bbc659ce49d6709d18914ce666935 133 SUPERFAMILY SSF46955 2 121 5.49E-23 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_1093 e32f0f218281f0fdc04c198d168a050c 334 Pfam PF06030 Bacterial protein of unknown function (DUF916) 33 163 1.1E-25 T 14-10-2018 IPR010317 Protein of unknown function DUF916, cell surface putative llmg_1093 e32f0f218281f0fdc04c198d168a050c 334 Pfam PF11797 Protein of unknown function C-terminal (DUF3324) 171 281 5.2E-6 T 14-10-2018 IPR021759 Domain of unknown function DUF3324, C-terminal llmg_1988 238e083dbe5f1a31edb949b3a31289f1 557 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 391 538 5.1E-17 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain llmg_1988 238e083dbe5f1a31edb949b3a31289f1 557 Pfam PF01943 Polysaccharide biosynthesis protein 26 335 3.3E-24 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 llmg_2000 7f68df4c41d4208df9388c5f47cfd34d 371 Pfam PF01594 AI-2E family transporter 19 353 1.5E-78 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like llmg_0728 15dc7340ee0faafce38baeec3150584c 270 Pfam PF03609 PTS system sorbose-specific iic component 6 241 4.7E-64 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 Gene3D G3DSA:3.90.1150.10 30 382 4.4E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 115 136 5.1E-13 T 14-10-2018 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 93 113 5.1E-13 T 14-10-2018 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 200 223 5.1E-13 T 14-10-2018 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 164 188 5.1E-13 T 14-10-2018 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 Gene3D G3DSA:3.40.640.10 60 284 4.4E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 Pfam PF00155 Aminotransferase class I and II 31 381 4.0E-61 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_0066 7f82e599f266ff3ae67354a4e8b64348 391 SUPERFAMILY SSF53383 6 379 9.04E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0727 f2a22acec93d5377b75b8a18111e7be9 307 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 8 307 1.5E-112 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 llmg_2005 78baad1d592c4b85234d250256effdec 145 SUPERFAMILY SSF53955 16 117 3.09E-7 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily llmg_2005 78baad1d592c4b85234d250256effdec 145 Gene3D G3DSA:1.20.141.10 65 141 4.2E-5 T 14-10-2018 llmg_0850 008073fc4e00151d36e2d86e30194efb 74 Pfam PF16938 Putative phage holin Dp-1 4 65 8.1E-24 T 14-10-2018 IPR031612 Putative phage holin llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 Pfam PF15609 Phosphoribosyl transferase 23 205 5.9E-42 T 14-10-2018 llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 Pfam PF12500 TRSP domain C terminus to PRTase_2 266 381 7.3E-20 T 14-10-2018 IPR022537 TRSP domain llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 Gene3D G3DSA:3.40.50.2020 28 215 1.1E-6 T 14-10-2018 llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 SUPERFAMILY SSF53271 43 179 1.85E-7 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 PIRSF PIRSF020967 264 389 1.8E-8 T 14-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 llmg_1357 6925c6253914ddd5ac6356ccc145ce93 398 PIRSF PIRSF020967 14 186 2.2E-24 T 14-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 llmg_2261 5aa9aecaf5f02e74f6b09f6395f61490 221 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 21 108 1.9E-13 T 14-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family llmg_2246 4f64249504ca2344a223aec80be402f2 273 SUPERFAMILY SSF53335 21 256 6.22E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase llmg_2246 4f64249504ca2344a223aec80be402f2 273 PIRSF PIRSF018249 4 273 1.6E-88 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 llmg_2246 4f64249504ca2344a223aec80be402f2 273 Gene3D G3DSA:3.40.50.150 18 273 1.6E-51 T 14-10-2018 llmg_2246 4f64249504ca2344a223aec80be402f2 273 Pfam PF08241 Methyltransferase domain 97 175 2.9E-6 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 llmg_1966 96f7589709e519264990b6931cd28e75 87 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 4 78 2.9E-11 T 14-10-2018 IPR024962 YukD-like llmg_1966 96f7589709e519264990b6931cd28e75 87 SUPERFAMILY SSF54236 2 81 1.65E-6 T 14-10-2018 IPR029071 Ubiquitin-like domain superfamily llmg_1684 bb281f6da15a1e507f57f95a3b8b0afd 188 Pfam PF06736 Protein of unknown function (DUF1211) 5 89 3.1E-29 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 llmg_0504 f2feda9fa326f34c2caeb97895e6cd25 125 Pfam PF11457 Protein of unknown function (DUF3021) 2 123 9.5E-8 T 14-10-2018 IPR021560 Protein of unknown function DUF3021 llmg_1927 706721dea34dfbfb2b9c13437258f6bb 354 SUPERFAMILY SSF51735 3 158 2.22E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily llmg_1927 706721dea34dfbfb2b9c13437258f6bb 354 Gene3D G3DSA:3.40.50.720 1 169 1.9E-49 T 14-10-2018 llmg_1927 706721dea34dfbfb2b9c13437258f6bb 354 Pfam PF02153 Prephenate dehydrogenase 16 263 1.5E-61 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 llmg_1927 706721dea34dfbfb2b9c13437258f6bb 354 Gene3D G3DSA:1.10.3660.10 170 276 7.4E-32 T 14-10-2018 llmg_1927 706721dea34dfbfb2b9c13437258f6bb 354 SUPERFAMILY SSF48179 166 275 1.11E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 llmg_1521 814e9134541a0cd4266cccb2ad2f8108 318 Gene3D G3DSA:3.90.550.10 5 200 1.3E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1521 814e9134541a0cd4266cccb2ad2f8108 318 Pfam PF00535 Glycosyl transferase family 2 8 175 2.0E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1521 814e9134541a0cd4266cccb2ad2f8108 318 SUPERFAMILY SSF53448 7 229 8.8E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2449 4f74c323b8d4d17effa6065d83673fc0 176 Pfam PF03692 Putative zinc- or iron-chelating domain 63 150 1.1E-16 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein llmg_0656 afd2289fe6be87286e2452c473062146 296 Pfam PF13612 Transposase DDE domain 107 246 8.6E-25 T 14-10-2018 IPR025668 Transposase DDE domain llmg_0830 3cacdd8a590c98bcac544f01055fe699 95 SUPERFAMILY SSF118010 1 94 2.09E-24 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily llmg_0830 3cacdd8a590c98bcac544f01055fe699 95 Pfam PF04327 Cysteine protease Prp 1 92 2.2E-21 T 14-10-2018 IPR007422 Cysteine protease Prp llmg_0830 3cacdd8a590c98bcac544f01055fe699 95 Gene3D G3DSA:3.30.70.1490 1 95 4.0E-20 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily llmg_2479 9f13f98b43085c10566c679092229ce7 213 SUPERFAMILY SSF56112 13 179 1.69E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily llmg_2479 9f13f98b43085c10566c679092229ce7 213 Pfam PF01636 Phosphotransferase enzyme family 24 169 6.3E-8 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase llmg_2479 9f13f98b43085c10566c679092229ce7 213 Gene3D G3DSA:3.90.1200.10 25 205 4.7E-11 T 14-10-2018 llmg_1536 45c685f3bff0e5a0fb9241b3f1bc38d5 149 SUPERFAMILY SSF55729 3 148 3.43E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1536 45c685f3bff0e5a0fb9241b3f1bc38d5 149 Gene3D G3DSA:3.40.630.30 2 146 2.6E-41 T 14-10-2018 llmg_1536 45c685f3bff0e5a0fb9241b3f1bc38d5 149 Pfam PF13673 Acetyltransferase (GNAT) domain 39 147 8.9E-18 T 14-10-2018 IPR000182 GNAT domain llmg_0345 0abd415a155c286ebc5d7ba1ebdf625b 273 Pfam PF02361 Cobalt transport protein 16 227 6.0E-24 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component llmg_1116 c9570b0dfe0025675c4fbb5dcc35a189 392 Pfam PF05816 Toxic anion resistance protein (TelA) 54 383 1.3E-114 T 14-10-2018 IPR008863 Toxic anion resistance llmg_1116 c9570b0dfe0025675c4fbb5dcc35a189 392 PIRSF PIRSF026508 9 391 1.2E-100 T 14-10-2018 IPR008863 Toxic anion resistance llmg_0518 407cd167c64a906c81723fe74aed54b9 63 Pfam PF11772 DNA-directed RNA polymerase subunit beta 16 59 2.8E-17 T 14-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA llmg_0837 0e2445c12aba7279828af7c73ec19e5f 110 Pfam PF05135 Phage gp6-like head-tail connector protein 11 97 6.0E-5 T 14-10-2018 IPR021146 Phage gp6-like head-tail connector protein llmg_0899 b70ca1fd38ca02c18270e1b3c474d44f 100 Gene3D G3DSA:1.10.287.1080 8 95 5.6E-7 T 14-10-2018 llmg_1864 71fb09477252faec9f6b5e432cc78450 491 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 451 3.0E-157 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 llmg_1864 71fb09477252faec9f6b5e432cc78450 491 PIRSF PIRSF006446 2 475 1.0E-151 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 llmg_2088 ade656f019520d31dfe2e1c51746469d 215 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 6 130 1.7E-22 T 14-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal llmg_2088 ade656f019520d31dfe2e1c51746469d 215 Gene3D G3DSA:2.40.30.200 1 128 4.6E-8 T 14-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily llmg_2088 ade656f019520d31dfe2e1c51746469d 215 Pfam PF05709 Phage tail protein 43 199 8.9E-27 T 14-10-2018 IPR008841 Siphovirus-type tail component llmg_1800 774dda08ffb2b732535aceb89172e58a 236 Gene3D G3DSA:2.60.40.10 18 159 6.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_2128 d9602814081ba27d145c5fd75cc88206 123 Pfam PF04098 Rad52/22 family double-strand break repair protein 5 68 2.8E-11 T 14-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 llmg_2128 d9602814081ba27d145c5fd75cc88206 123 Pfam PF04098 Rad52/22 family double-strand break repair protein 77 123 2.5E-9 T 14-10-2018 IPR007232 DNA repair protein Rad52/59/22 GO:0006281|GO:0006310 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 39 434 9.5E-101 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 30 467 33.851 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 Pfam PF01566 Natural resistance-associated macrophage protein 59 441 2.1E-115 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 PRINTS PR00447 Natural resistance-associated macrophage protein signature 229 252 1.9E-44 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 PRINTS PR00447 Natural resistance-associated macrophage protein signature 118 144 1.9E-44 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 PRINTS PR00447 Natural resistance-associated macrophage protein signature 146 165 1.9E-44 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 PRINTS PR00447 Natural resistance-associated macrophage protein signature 344 363 1.9E-44 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1490 b60c39e4d059d1064d6d3075a9e85579 510 PRINTS PR00447 Natural resistance-associated macrophage protein signature 372 389 1.9E-44 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 llmg_1600 576364eb19f95dcecea366c2ecd7de7e 89 Pfam PF12674 Putative zinc ribbon domain 6 88 7.4E-26 T 14-10-2018 IPR025868 Putative zinc ribbon domain llmg_0846 eebf8ef14ae749d6aad97c886bf88b07 845 Pfam PF07902 gp58-like protein 446 615 1.9E-9 T 14-10-2018 IPR012892 Gp58-like llmg_1867 0b1a97a428f4c7b0bc0659a35898cc83 49 TIGRFAM TIGR01847 bacteriocin_sig: bacteriocin-type signal sequence 11 25 0.0022 T 14-10-2018 IPR010133 Bacteriocin-type signal sequence llmg_1867 0b1a97a428f4c7b0bc0659a35898cc83 49 Pfam PF03047 COMC family 1 26 4.5E-5 T 14-10-2018 IPR004288 Competence protein, ComC GO:0005186 llmg_0676 8fbaf0a55805ce9df1538f933894c096 165 Pfam PF13673 Acetyltransferase (GNAT) domain 52 157 3.2E-14 T 14-10-2018 IPR000182 GNAT domain llmg_0676 8fbaf0a55805ce9df1538f933894c096 165 SUPERFAMILY SSF55729 55 147 6.08E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0676 8fbaf0a55805ce9df1538f933894c096 165 Gene3D G3DSA:3.40.630.30 25 154 1.5E-21 T 14-10-2018 llmg_2105 bf448dffb00817bcac08c67bb3b9891d 133 Pfam PF05263 Protein of unknown function (DUF722) 1 124 1.6E-52 T 14-10-2018 IPR007927 Protein of unknown function DUF722 llmg_1146 03d231ef77ca1bebc999147859e88f80 116 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 2 114 1.0E-11 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_1710 10174246f7bba280590dadc90c468958 296 Pfam PF00535 Glycosyl transferase family 2 12 181 1.6E-33 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1710 10174246f7bba280590dadc90c468958 296 Gene3D G3DSA:3.90.550.10 7 212 2.9E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1710 10174246f7bba280590dadc90c468958 296 SUPERFAMILY SSF53448 9 231 4.03E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_2256 9e743c3b3bfb1e4cc4d1300373cc892b 93 SUPERFAMILY SSF46955 41 91 2.75E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 SMART SM00411 1 72 3.5E-5 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 Pfam PF00216 Bacterial DNA-binding protein 3 70 4.0E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 SUPERFAMILY SSF47729 3 72 1.27E-15 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 Gene3D G3DSA:4.10.520.10 1 79 9.6E-17 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 PRINTS PR01727 Prokaryotic integration host factor signature 56 70 1.2E-6 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_1661 b761be6c838bb9e826519d4e59c1b00d 101 PRINTS PR01727 Prokaryotic integration host factor signature 22 37 1.2E-6 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 llmg_1158 7c1581c0fb3cadd6643431785a777481 54 Pfam PF08020 Protein of unknown function (DUF1706) 2 50 2.1E-16 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 llmg_1158 7c1581c0fb3cadd6643431785a777481 54 Gene3D G3DSA:1.20.120.450 1 52 1.8E-15 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes llmg_2254 b881003db38b30f80bc2b379c574767e 111 Gene3D G3DSA:1.10.10.10 2 67 3.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0412 cc1a059c7ef639af948defa1aa96f723 270 Gene3D G3DSA:3.60.15.10 12 252 4.0E-40 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0412 cc1a059c7ef639af948defa1aa96f723 270 SUPERFAMILY SSF56281 13 232 8.26E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like llmg_0412 cc1a059c7ef639af948defa1aa96f723 270 SMART SM00849 17 199 1.8E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0412 cc1a059c7ef639af948defa1aa96f723 270 Pfam PF12706 Beta-lactamase superfamily domain 29 213 2.4E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase llmg_0724 cc27fdf5158db66e59612ec15cf9e1af 119 Pfam PF06115 Domain of unknown function (DUF956) 3 117 9.7E-33 T 14-10-2018 IPR010360 Protein of unknown function DUF956 llmg_0184 1814d4c60645f4b727d1a1fd1d9c54b6 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 1.0E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain llmg_0184 1814d4c60645f4b727d1a1fd1d9c54b6 126 SUPERFAMILY SSF54593 1 125 2.69E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0184 1814d4c60645f4b727d1a1fd1d9c54b6 126 Gene3D G3DSA:3.10.180.10 1 126 6.4E-34 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0834 9538f95e82a2395af63452dd5a2dc494 90 Pfam PF13031 Protein of unknown function (DUF3892) 4 88 5.4E-11 T 14-10-2018 IPR024997 Protein of unknown function DUF3892 llmg_1597 14ec408db81eaee45aa1ae0a99e21b98 148 SMART SM01022 21 146 7.7E-36 T 14-10-2018 IPR007374 ASCH domain llmg_1597 14ec408db81eaee45aa1ae0a99e21b98 148 Pfam PF04266 ASCH domain 37 146 8.3E-27 T 14-10-2018 IPR007374 ASCH domain llmg_1597 14ec408db81eaee45aa1ae0a99e21b98 148 SUPERFAMILY SSF88697 3 146 6.71E-42 T 14-10-2018 IPR015947 PUA-like superfamily llmg_1597 14ec408db81eaee45aa1ae0a99e21b98 148 Gene3D G3DSA:3.10.400.10 1 148 7.6E-44 T 14-10-2018 llmg_1597 14ec408db81eaee45aa1ae0a99e21b98 148 PIRSF PIRSF021320 1 148 1.2E-45 T 14-10-2018 IPR009326 Protein of unknown function DUF984 llmg_0579 710b6846d3e5187f9331ac9ca4ef9298 148 Pfam PF04138 GtrA-like protein 14 140 4.2E-21 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 llmg_2341 22a65c925d0b802a0988ac9c01f9e49a 361 Gene3D G3DSA:3.40.50.1010 163 296 1.1E-46 T 14-10-2018 llmg_2341 22a65c925d0b802a0988ac9c01f9e49a 361 SUPERFAMILY SSF88723 168 292 1.28E-22 T 14-10-2018 IPR029060 PIN-like domain superfamily llmg_2341 22a65c925d0b802a0988ac9c01f9e49a 361 SMART SM00670 167 272 1.2E-5 T 14-10-2018 IPR002716 PIN domain llmg_1459 864a9851f69a6aeeaa68e55bc14500bc 326 Gene3D G3DSA:1.10.3720.10 91 318 6.9E-17 T 14-10-2018 IPR035906 MetI-like superfamily llmg_1459 864a9851f69a6aeeaa68e55bc14500bc 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 324 2.4E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_1459 864a9851f69a6aeeaa68e55bc14500bc 326 SUPERFAMILY SSF161098 95 323 8.07E-16 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0655 0cd7b55add3fe4ac7e4924f45d6aa10e 91 SUPERFAMILY SSF46689 3 88 3.23E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0655 0cd7b55add3fe4ac7e4924f45d6aa10e 91 Pfam PF01527 Transposase 1 76 3.4E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 llmg_0655 0cd7b55add3fe4ac7e4924f45d6aa10e 91 Gene3D G3DSA:1.10.10.60 8 86 4.2E-9 T 14-10-2018 llmg_2532 32aa4f6f61f82e52985c9d9ba8c8c263 109 Gene3D G3DSA:1.10.10.10 2 67 3.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_1215 37100686e082c71f7ca0e51fb56dfe93 710 SUPERFAMILY SSF53448 321 606 1.31E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1215 37100686e082c71f7ca0e51fb56dfe93 710 Pfam PF13641 Glycosyltransferase like family 2 321 556 4.0E-19 T 14-10-2018 llmg_1215 37100686e082c71f7ca0e51fb56dfe93 710 Gene3D G3DSA:3.90.550.10 303 540 7.0E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1670 9cfa05f073c1e3bceb8562cd83148ff1 138 Gene3D G3DSA:3.10.450.50 7 138 6.1E-33 T 14-10-2018 llmg_1670 9cfa05f073c1e3bceb8562cd83148ff1 138 Pfam PF13474 SnoaL-like domain 11 123 8.0E-7 T 14-10-2018 IPR037401 SnoaL-like domain llmg_1670 9cfa05f073c1e3bceb8562cd83148ff1 138 SUPERFAMILY SSF54427 8 133 1.11E-24 T 14-10-2018 IPR032710 NTF2-like domain superfamily llmg_0710 41087758d2b4a6905851a16ab47dff8c 275 SUPERFAMILY SSF158560 2 100 1.44E-18 T 14-10-2018 llmg_1727 1571257a33cb6c58591cc7dc9f789231 883 Pfam PF09586 Bacterial membrane protein YfhO 14 855 1.1E-238 T 14-10-2018 IPR018580 Uncharacterised protein family YfhO llmg_0781 3bbb2852fd9d46a429f60e9cac75cac3 67 Pfam PF11184 Protein of unknown function (DUF2969) 1 66 5.2E-17 T 14-10-2018 IPR021351 Protein of unknown function DUF2969 llmg_1351 a72e303d8f51f4e73a977164d67e7a75 191 Pfam PF02342 TerD domain 1 187 1.6E-75 T 14-10-2018 IPR003325 TerD domain llmg_1351 a72e303d8f51f4e73a977164d67e7a75 191 Gene3D G3DSA:2.60.60.30 19 185 1.1E-63 T 14-10-2018 llmg_2438 c8bd67c8b157c9ed3ae1939ec7e2af24 285 Gene3D G3DSA:1.25.40.10 3 282 5.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 llmg_2438 c8bd67c8b157c9ed3ae1939ec7e2af24 285 TIGRFAM TIGR01716 RGG_Cterm: transcriptional activator, Rgg/GadR/MutR family, C-terminal domain 67 272 9.2E-30 T 14-10-2018 IPR010057 Transcription activator MutR, C-terminal llmg_2438 c8bd67c8b157c9ed3ae1939ec7e2af24 285 SUPERFAMILY SSF47413 6 67 3.21E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1442 133999270f23053c067ef27c901b5e72 149 Gene3D G3DSA:3.10.180.10 1 149 2.4E-46 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1442 133999270f23053c067ef27c901b5e72 149 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 139 7.0E-8 T 14-10-2018 IPR028973 PhnB-like llmg_1442 133999270f23053c067ef27c901b5e72 149 SUPERFAMILY SSF54593 3 146 3.32E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1052 b9d61a341c589ce06ca9f877d3c9204a 357 Pfam PF11922 Domain of unknown function (DUF3440) 243 356 5.9E-49 T 14-10-2018 IPR021845 Protein of unknown function DUF3440 llmg_1052 b9d61a341c589ce06ca9f877d3c9204a 357 SUPERFAMILY SSF52402 4 237 1.01E-31 T 14-10-2018 llmg_1052 b9d61a341c589ce06ca9f877d3c9204a 357 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 162 240 1.3E-5 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 llmg_0649 cfcc058a54e762e2716431307c7732f2 274 Gene3D G3DSA:3.20.20.370 28 274 1.7E-54 T 14-10-2018 llmg_0649 cfcc058a54e762e2716431307c7732f2 274 Pfam PF01522 Polysaccharide deacetylase 99 229 3.8E-22 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 llmg_0649 cfcc058a54e762e2716431307c7732f2 274 SUPERFAMILY SSF88713 64 239 3.52E-24 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 llmg_0835 5b3a5f27a5fdf3b204bf1186f58d544b 208 Pfam PF14265 Domain of unknown function (DUF4355) 52 165 7.2E-25 T 14-10-2018 IPR025580 Protein of unknown function DUF4355 llmg_0213 353b2f07e58c7f47440bcef065abe6e7 269 Pfam PF01061 ABC-2 type transporter 12 220 6.5E-21 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_0855 fe950dad7efb780fc4849d26bb05a5e0 101 Pfam PF08951 Enterocin A Immunity 10 77 3.8E-8 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_0541 84a599c8c50087e6f033b210a88c72b6 252 SUPERFAMILY SSF56784 3 245 4.68E-33 T 14-10-2018 IPR036412 HAD-like superfamily llmg_0541 84a599c8c50087e6f033b210a88c72b6 252 Pfam PF03332 Eukaryotic phosphomannomutase 24 247 1.1E-12 T 14-10-2018 IPR005002 Phosphomannomutase GO:0004615|GO:0005737|GO:0009298 KEGG: 00051+5.4.2.8|KEGG: 00520+5.4.2.8|MetaCyc: PWY-5659|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 llmg_0541 84a599c8c50087e6f033b210a88c72b6 252 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 233 3.6E-51 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 llmg_0541 84a599c8c50087e6f033b210a88c72b6 252 Gene3D G3DSA:3.30.1240.20 90 185 1.7E-93 T 14-10-2018 llmg_0541 84a599c8c50087e6f033b210a88c72b6 252 Gene3D G3DSA:3.40.50.1000 3 244 1.7E-93 T 14-10-2018 IPR023214 HAD superfamily llmg_0187 7eb78327d78b8b207d9e24e0a9331e9c 494 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 489 1.3E-93 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 llmg_0187 7eb78327d78b8b207d9e24e0a9331e9c 494 Pfam PF02378 Phosphotransferase system, EIIC 29 420 7.3E-77 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 llmg_1900 d5d408bb8b9de8f1b5a85d475f8554cd 283 Gene3D G3DSA:3.40.190.10 30 265 6.3E-74 T 14-10-2018 llmg_1900 d5d408bb8b9de8f1b5a85d475f8554cd 283 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 265 2.2E-69 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 llmg_1900 d5d408bb8b9de8f1b5a85d475f8554cd 283 Gene3D G3DSA:3.40.190.10 102 224 6.3E-74 T 14-10-2018 llmg_1900 d5d408bb8b9de8f1b5a85d475f8554cd 283 Pfam PF12849 PBP superfamily domain 23 254 2.4E-31 T 14-10-2018 IPR024370 PBP domain llmg_1900 d5d408bb8b9de8f1b5a85d475f8554cd 283 SUPERFAMILY SSF53850 28 274 2.29E-65 T 14-10-2018 llmg_0391 06729dbfe918e7ec37bb5fa0132bff56 331 Pfam PF03601 Conserved hypothetical protein 698 5 310 7.5E-95 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 llmg_1813 4e681b194bbee7faee522155a8d13288 85 Gene3D G3DSA:2.30.30.100 1 84 6.3E-24 T 14-10-2018 llmg_1813 4e681b194bbee7faee522155a8d13288 85 PIRSF PIRSF037257 1 85 2.0E-27 T 14-10-2018 IPR009366 Protein Veg GO:0006355 llmg_1813 4e681b194bbee7faee522155a8d13288 85 Pfam PF06257 Biofilm formation stimulator VEG 10 81 1.1E-19 T 14-10-2018 IPR009366 Protein Veg GO:0006355 llmg_0719 ad974ad9cb19cfbea23e25422c60e633 386 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 181 1.7E-5 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain llmg_0719 ad974ad9cb19cfbea23e25422c60e633 386 Gene3D G3DSA:3.90.76.10 59 145 1.1E-7 T 14-10-2018 llmg_0719 ad974ad9cb19cfbea23e25422c60e633 386 SUPERFAMILY SSF53850 15 179 9.41E-8 T 14-10-2018 llmg_0719 ad974ad9cb19cfbea23e25422c60e633 386 Gene3D G3DSA:3.40.190.10 146 210 1.1E-7 T 14-10-2018 llmg_0588 3b9375b2da69055323d34700db1d2dc5 671 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 11 647 27.044 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup llmg_0588 3b9375b2da69055323d34700db1d2dc5 671 Pfam PF02705 K+ potassium transporter 20 551 2.6E-161 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 llmg_1499 eef6f849f7ff205d1602fe271c5bb03b 257 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 247 4.8E-58 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 llmg_1499 eef6f849f7ff205d1602fe271c5bb03b 257 Gene3D G3DSA:3.40.1390.30 100 220 2.2E-74 T 14-10-2018 llmg_1499 eef6f849f7ff205d1602fe271c5bb03b 257 SUPERFAMILY SSF102705 1 255 1.28E-79 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily llmg_1499 eef6f849f7ff205d1602fe271c5bb03b 257 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 237 1.6E-71 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 llmg_1499 eef6f849f7ff205d1602fe271c5bb03b 257 Gene3D G3DSA:3.40.1390.30 7 229 2.2E-74 T 14-10-2018 llmg_1854 624622e71f2877413c305da00d886a81 214 Pfam PF09335 SNARE associated Golgi protein 30 161 4.2E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein llmg_0437 14c5b6f6da8a40f6f31e8cfb67526925 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 101 3.6E-19 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 llmg_0437 14c5b6f6da8a40f6f31e8cfb67526925 108 SUPERFAMILY SSF52794 4 108 4.97E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 llmg_0437 14c5b6f6da8a40f6f31e8cfb67526925 108 Gene3D G3DSA:3.40.50.2300 5 108 1.0E-30 T 14-10-2018 llmg_2146 8b8d66aad29c80a5bd94c298cd0aa35e 80 Pfam PF04226 Transglycosylase associated protein 31 75 2.1E-10 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 llmg_0434 7495e1371a34569bd2f4244ab67f18b6 194 Pfam PF02698 DUF218 domain 42 183 2.8E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 llmg_2041 281cfcd8cd59691ec3cb6195670121c3 197 Pfam PF06736 Protein of unknown function (DUF1211) 17 102 2.8E-18 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 llmg_0070 a3cbc121fdc23c0eb5fad1aaec066dfb 411 SUPERFAMILY SSF103473 7 405 6.15E-24 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0070 a3cbc121fdc23c0eb5fad1aaec066dfb 411 Pfam PF07690 Major Facilitator Superfamily 13 354 1.3E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_0070 a3cbc121fdc23c0eb5fad1aaec066dfb 411 Gene3D G3DSA:1.20.1250.20 4 400 4.9E-21 T 14-10-2018 llmg_0882 907a4b2559a20856ad9d9a7710b205d8 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 104 4.5E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD llmg_1609 2f069089487515ee280d75a03d6bc32a 428 Gene3D G3DSA:3.40.50.1110 188 426 9.2E-34 T 14-10-2018 IPR036514 SGNH hydrolase superfamily llmg_1609 2f069089487515ee280d75a03d6bc32a 428 SUPERFAMILY SSF52266 223 426 6.87E-41 T 14-10-2018 llmg_1609 2f069089487515ee280d75a03d6bc32a 428 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 228 417 8.3E-21 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain llmg_0803 01266a6c43908d16548ecdd9b348b32e 58 Pfam PF04761 Lactococcus bacteriophage putative transcription regulator 3 58 1.7E-37 T 14-10-2018 IPR006848 Transcription regulator, putative, lactococcus phage-type llmg_0848 0541e62b12de706eaf12b047990f8404 497 SUPERFAMILY SSF69349 359 400 9.42E-14 T 14-10-2018 llmg_1029 560abc42a3fad6095fe8eedd3c8b335d 119 Pfam PF06993 Protein of unknown function (DUF1304) 10 116 1.1E-33 T 14-10-2018 IPR009732 Protein of unknown function DUF1304 llmg_2091 328aeae71dfd92669728b93056abec47 197 Pfam PF04630 Phage tail tube protein 1 195 5.1E-75 T 14-10-2018 IPR006724 Phage tail tube protein 1 llmg_0623 fa4e2050518fee3fa37a3ec622d30cb4 226 Pfam PF16872 Putative phage abortive infection protein 115 175 1.2E-13 T 14-10-2018 IPR031709 Putative phage abortive infection protein llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 Pfam PF08706 D5 N terminal like 110 232 1.2E-8 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 178 480 6.6E-89 T 14-10-2018 IPR006500 DNA primase, phage/plasmid llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 Pfam PF03288 Poxvirus D5 protein-like 434 511 6.0E-18 T 14-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 SUPERFAMILY SSF52540 217 414 5.31E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 SMART SM00885 105 228 1.7E-28 T 14-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal llmg_2252 9303b233e7c4319a16a71cd15585acd4 542 Gene3D G3DSA:3.40.50.300 216 410 4.8E-11 T 14-10-2018 llmg_1012 8cc67171a960177bad07763b19852292 133 Gene3D G3DSA:3.40.190.10 44 130 4.7E-13 T 14-10-2018 llmg_1012 8cc67171a960177bad07763b19852292 133 SUPERFAMILY SSF53850 11 131 2.93E-10 T 14-10-2018 llmg_1012 8cc67171a960177bad07763b19852292 133 Gene3D G3DSA:3.40.190.10 11 43 4.7E-13 T 14-10-2018 llmg_0841 5ad746d15788ba84f0f2a01f282d0258 137 Pfam PF08813 Phage tail tube protein, TTP 14 132 1.0E-5 T 14-10-2018 IPR014918 Phage tail tube protein 3 llmg_0330 eca168024f0efb008dea533797f263d4 293 SUPERFAMILY SSF103473 11 286 6.8E-27 T 14-10-2018 IPR036259 MFS transporter superfamily llmg_0330 eca168024f0efb008dea533797f263d4 293 Gene3D G3DSA:1.20.1250.20 2 280 7.8E-26 T 14-10-2018 llmg_0330 eca168024f0efb008dea533797f263d4 293 Pfam PF07690 Major Facilitator Superfamily 13 247 1.1E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 llmg_1170 8437e0ceb88ca9040b254e3495a129e9 575 SUPERFAMILY SSF56300 362 538 6.17E-9 T 14-10-2018 llmg_1170 8437e0ceb88ca9040b254e3495a129e9 575 Pfam PF00149 Calcineurin-like phosphoesterase 360 534 2.3E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 llmg_0546 333f297807cde39b68c2fca289eb1f30 61 Pfam PF01361 Tautomerase enzyme 2 60 3.3E-21 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 llmg_0546 333f297807cde39b68c2fca289eb1f30 61 Gene3D G3DSA:3.30.429.10 1 59 3.4E-20 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily llmg_0546 333f297807cde39b68c2fca289eb1f30 61 SUPERFAMILY SSF55331 2 58 4.06E-16 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily llmg_0032 4747748e403be3a4df8b6d3c40bfe312 111 Gene3D G3DSA:1.10.10.10 2 67 3.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily llmg_0703 63c10e1167eee91cc699d894061e590f 439 Gene3D G3DSA:3.90.350.10 169 343 9.6E-6 T 14-10-2018 IPR014736 Transposase, Tn5-like, core llmg_0703 63c10e1167eee91cc699d894061e590f 439 SUPERFAMILY SSF53098 73 382 8.34E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily llmg_0703 63c10e1167eee91cc699d894061e590f 439 Pfam PF01609 Transposase DDE domain 116 365 1.1E-34 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 llmg_1628 abd0fb9a30e6c49d39f16cf36e938060 213 Pfam PF15983 Domain of unknown function (DUF4767) 75 212 2.0E-46 T 14-10-2018 IPR031927 Domain of unknown function DUF4767 llmg_0331 e7eac30f3c8354029b945bdb6dc7669c 118 Pfam PF11877 Protein of unknown function (DUF3397) 5 116 3.9E-27 T 14-10-2018 IPR024515 Protein of unknown function DUF3397 llmg_0881 262ff24866affec584eca6d113904941 235 Pfam PF03591 AzlC protein 16 157 9.2E-38 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease llmg_2125 4b4d7928b4f90fc01af39c0bee29ad32 260 Pfam PF06926 Putative replisome organiser protein C-terminus 167 258 2.5E-44 T 14-10-2018 IPR009696 Putative replisome organiser, C-terminal llmg_2557 cba30565ae8769371857405b4c0448a9 155 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 llmg_2557 cba30565ae8769371857405b4c0448a9 155 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 155 34.977 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 llmg_2557 cba30565ae8769371857405b4c0448a9 155 SUPERFAMILY SSF47973 2 151 2.62E-60 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily llmg_2557 cba30565ae8769371857405b4c0448a9 155 Pfam PF00177 Ribosomal protein S7p/S5e 2 148 2.1E-64 T 14-10-2018 IPR023798 Ribosomal protein S7 domain llmg_2557 cba30565ae8769371857405b4c0448a9 155 Gene3D G3DSA:1.10.455.10 1 155 1.5E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily llmg_2557 cba30565ae8769371857405b4c0448a9 155 PIRSF PIRSF002122 2 155 3.8E-56 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 llmg_2557 cba30565ae8769371857405b4c0448a9 155 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 155 4.9E-69 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 llmg_1259 502c2240bae0259070d8e9e22851d5e0 62 Pfam PF10031 Small integral membrane protein (DUF2273) 3 49 5.6E-16 T 14-10-2018 IPR018730 Protein of unknown function DUF2273 llmg_0815 4dcfcb4934952f51786adbe738215e51 182 Pfam PF07852 Protein of unknown function (DUF1642) 45 179 2.0E-40 T 14-10-2018 IPR012865 Protein of unknown function DUF1642 llmg_2115 50c3364ce2dcbbeaf592d60b37664150 185 Pfam PF07852 Protein of unknown function (DUF1642) 59 182 7.0E-22 T 14-10-2018 IPR012865 Protein of unknown function DUF1642 llmg_1481 27c93aa759e9effd6fef5dd02c4cb4a0 166 Pfam PF04892 VanZ like family 10 125 3.7E-20 T 14-10-2018 IPR006976 VanZ-like llmg_0171 222e7392d4fad83a16788a002bdb0ddc 404 SUPERFAMILY SSF53383 7 400 1.77E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase llmg_0171 222e7392d4fad83a16788a002bdb0ddc 404 Pfam PF00155 Aminotransferase class I and II 34 386 3.6E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 llmg_0171 222e7392d4fad83a16788a002bdb0ddc 404 Gene3D G3DSA:3.40.640.10 53 294 2.8E-134 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 llmg_0171 222e7392d4fad83a16788a002bdb0ddc 404 Gene3D G3DSA:3.90.1150.10 21 398 2.8E-134 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 llmg_0651 5f0c9a7b99a79900496d33b5efce07bd 90 Pfam PF14542 GCN5-related N-acetyl-transferase 10 87 1.2E-20 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase llmg_0651 5f0c9a7b99a79900496d33b5efce07bd 90 Gene3D G3DSA:3.40.630.30 1 90 2.3E-23 T 14-10-2018 llmg_0651 5f0c9a7b99a79900496d33b5efce07bd 90 SUPERFAMILY SSF55729 5 83 1.2E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0109 63df11c3b839cef46656dccc08834c3e 163 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 99 148 4.8E-7 T 14-10-2018 llmg_0109 63df11c3b839cef46656dccc08834c3e 163 SUPERFAMILY SSF141694 4 89 7.85E-8 T 14-10-2018 llmg_1851 89c7c1d7e87f6834bb9ee8a6ece713a6 220 Pfam PF06912 Protein of unknown function (DUF1275) 12 212 7.1E-29 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 llmg_1682 efe5454ce6e7a5f2c8db7251d986d16b 308 Pfam PF05656 Protein of unknown function (DUF805) 13 126 1.1E-11 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 llmg_1682 efe5454ce6e7a5f2c8db7251d986d16b 308 Pfam PF05656 Protein of unknown function (DUF805) 156 284 1.8E-8 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 llmg_0733 861f9194679922104484f99261c6165b 463 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 185 381 2.7E-56 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain llmg_0736 893916fbfe841ed93792eb76afa9d96d 191 Pfam PF02517 CAAX protease self-immunity 84 180 1.3E-10 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 llmg_0589 ff2363843cf018319a32e4760f0d3208 56 Pfam PF11240 Protein of unknown function (DUF3042) 2 55 2.0E-13 T 14-10-2018 IPR021402 Protein of unknown function DUF3042 llmg_0812 4724e5e265246948228079654f914af0 79 Pfam PF06275 Protein of unknown function (DUF1031) 1 79 7.8E-46 T 14-10-2018 IPR009376 Protein of unknown function DUF1031 llmg_2342 0386c4f1863a72d6ee8f180207cee20e 225 Pfam PF06912 Protein of unknown function (DUF1275) 15 214 1.1E-31 T 14-10-2018 IPR010699 Protein of unknown function DUF1275 llmg_1589 31d239ee4dc687c2709a2db3322af3d3 75 Pfam PF13268 Protein of unknown function (DUF4059) 2 70 5.8E-22 T 14-10-2018 IPR025134 Protein of unknown function DUF4059 llmg_1913 28d67338c4a859c544ed7a7a26d895bb 473 Pfam PF00860 Permease family 16 432 2.7E-38 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 llmg_1913 28d67338c4a859c544ed7a7a26d895bb 473 PIRSF PIRSF005353 1 472 3.5E-150 T 14-10-2018 IPR026033 Purine permease PbuG-like llmg_0879 b802da8b68439bf5624d4cf97fe19a4c 180 Gene3D G3DSA:3.40.630.30 10 177 1.2E-47 T 14-10-2018 llmg_0879 b802da8b68439bf5624d4cf97fe19a4c 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 144 7.0E-20 T 14-10-2018 IPR000182 GNAT domain llmg_0879 b802da8b68439bf5624d4cf97fe19a4c 180 SUPERFAMILY SSF55729 9 169 1.53E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_1650 b8994de52afb3c08aa2bf5b18798d363 191 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 100 188 9.1E-16 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF llmg_1650 b8994de52afb3c08aa2bf5b18798d363 191 PIRSF PIRSF031509 79 191 2.9E-29 T 14-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 llmg_1650 b8994de52afb3c08aa2bf5b18798d363 191 PIRSF PIRSF031509 1 95 3.3E-7 T 14-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 llmg_1664 8f964663d9b2b4eadbb063750b537f05 241 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 43 234 1.1E-59 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 llmg_1664 8f964663d9b2b4eadbb063750b537f05 241 Pfam PF04973 Nicotinamide mononucleotide transporter 43 229 5.6E-27 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 llmg_2057 9a7ed1f67d78dc35689857d3cb5d1460 91 Pfam PF02325 YGGT family 14 82 2.7E-15 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 140 200 2.0E-8 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 16 203 5.0E-55 T 14-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 Gene3D G3DSA:3.40.50.10240 1 211 2.1E-59 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 SMART SM00983 138 201 1.1E-16 T 14-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 SUPERFAMILY SSF63999 16 125 1.96E-25 T 14-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_2013 354d29b4508e7351b9bf7411d88e5df3 211 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 21 113 1.1E-15 T 14-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 llmg_1452 1a6802029270871eb6783994151e52b8 489 Pfam PF13520 Amino acid permease 6 453 3.6E-33 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1452 1a6802029270871eb6783994151e52b8 489 PIRSF PIRSF006060 1 486 2.1E-44 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 llmg_1452 1a6802029270871eb6783994151e52b8 489 Gene3D G3DSA:1.20.1740.10 1 481 2.1E-21 T 14-10-2018 llmg_2414 0e46c5573bb179bee5c098d506947d12 267 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 226 252 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 llmg_2414 0e46c5573bb179bee5c098d506947d12 267 Pfam PF01148 Cytidylyltransferase family 3 264 1.0E-68 T 14-10-2018 llmg_1159 c6948cd7bafa95d9f765662e16bd39da 120 Gene3D G3DSA:1.20.120.450 1 120 2.5E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes llmg_1159 c6948cd7bafa95d9f765662e16bd39da 120 Pfam PF08020 Protein of unknown function (DUF1706) 1 117 7.8E-32 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 llmg_1526 df3bc71bff225bc8563edf83a3f2dca0 126 Gene3D G3DSA:3.10.450.50 10 126 4.3E-5 T 14-10-2018 llmg_0248 d4a029cad7ba2a490ec43a715cc81698 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 1.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0248 d4a029cad7ba2a490ec43a715cc81698 181 Gene3D G3DSA:1.10.357.10 1 180 1.3E-37 T 14-10-2018 llmg_0248 d4a029cad7ba2a490ec43a715cc81698 181 SUPERFAMILY SSF46689 5 69 2.21E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 llmg_0248 d4a029cad7ba2a490ec43a715cc81698 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 1.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0248 d4a029cad7ba2a490ec43a715cc81698 181 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 1.0E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 llmg_0941 c58f2668f69cf6d47ad14412f8268088 180 SUPERFAMILY SSF55729 3 160 2.75E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase llmg_0941 c58f2668f69cf6d47ad14412f8268088 180 Pfam PF13302 Acetyltransferase (GNAT) domain 4 154 5.4E-9 T 14-10-2018 IPR000182 GNAT domain llmg_0941 c58f2668f69cf6d47ad14412f8268088 180 Gene3D G3DSA:3.40.630.30 3 156 3.6E-18 T 14-10-2018 llmg_1918 4187fe839dd36c13bedc2d5c9826a085 237 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 229 1.7E-49 T 14-10-2018 IPR006214 Bax inhibitor 1-related llmg_0062 2871166ef361f01a61fe2f52e15507d9 67 Pfam PF05154 TM2 domain 3 42 1.0E-10 T 14-10-2018 IPR007829 TM2 domain llmg_0101 f795d95113986b10586cd3bbb0501dae 282 Pfam PF03988 Repeat of Unknown Function (DUF347) 143 199 4.4E-11 T 14-10-2018 IPR007136 Protein of unknown function DUF347 llmg_0101 f795d95113986b10586cd3bbb0501dae 282 Pfam PF03988 Repeat of Unknown Function (DUF347) 17 73 2.2E-8 T 14-10-2018 IPR007136 Protein of unknown function DUF347 llmg_0086 c7eaf51891aec31021655a533ce4e48d 84 Pfam PF05360 yiaA/B two helix domain 12 64 1.0E-12 T 14-10-2018 IPR008024 YiaAB two helix llmg_0449 0ca4a43aee0f01b06a21cea17426a4f7 95 Gene3D G3DSA:2.170.120.30 37 93 2.9E-6 T 14-10-2018 llmg_2272 7c172d752f463cc6af21b72eb68ab6ed 592 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 346 563 1.1E-19 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 llmg_2272 7c172d752f463cc6af21b72eb68ab6ed 592 SUPERFAMILY SSF51695 341 568 1.83E-50 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 llmg_2272 7c172d752f463cc6af21b72eb68ab6ed 592 Gene3D G3DSA:3.20.20.190 336 572 2.1E-44 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 llmg_2272 7c172d752f463cc6af21b72eb68ab6ed 592 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 13 325 2.2E-82 T 14-10-2018 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain llmg_0040 949c2be207fa3f6f7daa8426fff6e963 71 SUPERFAMILY SSF47413 8 64 5.63E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_1748 56cfbf79144d76887d8e9e9963b4066b 253 Pfam PF07907 YibE/F-like protein 4 241 8.2E-54 T 14-10-2018 IPR012507 YibE/F-like llmg_1748 56cfbf79144d76887d8e9e9963b4066b 253 PIRSF PIRSF031503 1 253 6.0E-104 T 14-10-2018 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane llmg_0978 4b1b89545393e3e50e8ab00742eb769f 140 Gene3D G3DSA:3.40.50.720 1 139 3.2E-5 T 14-10-2018 llmg_2188 675e15d33983a0ebd7bde22960d6451f 89 Gene3D G3DSA:3.40.50.300 1 89 4.2E-12 T 14-10-2018 llmg_1383 b8d15bbbba0ff249ed72da13975ff6b8 612 SUPERFAMILY SSF52540 149 549 3.72E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase llmg_1383 b8d15bbbba0ff249ed72da13975ff6b8 612 Gene3D G3DSA:3.40.50.300 338 567 2.4E-41 T 14-10-2018 llmg_1383 b8d15bbbba0ff249ed72da13975ff6b8 612 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 152 563 9.3E-54 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 llmg_2143 3d576aa42d8180f24a56430b5baba29b 168 Pfam PF03780 Asp23 family, cell envelope-related function 14 120 1.0E-29 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 llmg_1663 a3f460e3a414dbe49a764065c7031abe 51 SUPERFAMILY SSF143100 6 49 9.29E-5 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like llmg_1247 f0852e9029ec327a4998327532a062be 131 Gene3D G3DSA:3.40.30.10 1 110 6.8E-39 T 14-10-2018 llmg_1247 f0852e9029ec327a4998327532a062be 131 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 131 1.1E-41 T 14-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 llmg_1085 068dd4e1267a9143a08e4a1ef2243133 241 Hamap MF_02089 Epoxyqueuosine reductase QueH [queH]. 40 222 33.722 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 llmg_1085 068dd4e1267a9143a08e4a1ef2243133 241 Pfam PF02677 Uncharacterized BCR, COG1636 40 220 8.9E-63 T 14-10-2018 IPR003828 Epoxyqueuosine reductase QueH MetaCyc: PWY-6700 llmg_0222 fceb44ded46c41ef7a0a8c5de47abb76 332 Pfam PF11380 Stealth protein CR2, conserved region 2 40 141 1.2E-41 T 14-10-2018 IPR021520 Stealth protein CR2, conserved region 2 GO:0016772 llmg_1506 16883ed2b7bac162c8c19b92ede0f0a9 1267 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 15 34 4.8E-6 T 14-10-2018 IPR022263 KxYKxGKxW signal peptide llmg_1506 16883ed2b7bac162c8c19b92ede0f0a9 1267 Pfam PF07523 Bacterial Ig-like domain (group 3) 265 319 2.0E-6 T 14-10-2018 IPR022038 Bacterial Ig-like domain llmg_1506 16883ed2b7bac162c8c19b92ede0f0a9 1267 Gene3D G3DSA:2.60.40.10 262 332 2.3E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold llmg_1625 cd082eb910ceb5b375af9c3c036478a0 239 Pfam PF16069 Domain of unknown function (DUF4811) 24 187 5.4E-50 T 14-10-2018 IPR032083 Protein of unknown function DUF4811 llmg_1620 eaf6f8d9f5b450a3b1c2b2a854639b6e 733 Pfam PF00535 Glycosyl transferase family 2 43 166 1.2E-29 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 llmg_1620 eaf6f8d9f5b450a3b1c2b2a854639b6e 733 SUPERFAMILY SSF53448 40 264 3.0E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1620 eaf6f8d9f5b450a3b1c2b2a854639b6e 733 Gene3D G3DSA:3.90.550.10 38 241 2.5E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases llmg_1615 af13072e6bd77117211f99351e64946e 217 Gene3D G3DSA:2.160.10.10 7 215 2.3E-37 T 14-10-2018 llmg_1615 af13072e6bd77117211f99351e64946e 217 SUPERFAMILY SSF51161 60 199 9.7E-20 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily llmg_1242 c44deeccad99a690350336abf2781e97 73 Gene3D G3DSA:3.30.420.40 1 70 4.9E-5 T 14-10-2018 llmg_1242 c44deeccad99a690350336abf2781e97 73 SUPERFAMILY SSF53067 2 67 2.78E-7 T 14-10-2018 llmg_1135 80183581aeee052f09633e414752a6fe 137 SUPERFAMILY SSF54593 3 130 7.19E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_1135 80183581aeee052f09633e414752a6fe 137 Gene3D G3DSA:3.10.180.10 1 137 6.1E-39 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase llmg_0699 c1796ad1a4a95d1f26d7a29c2c60f626 319 Gene3D G3DSA:1.10.3720.10 84 313 7.1E-22 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0699 c1796ad1a4a95d1f26d7a29c2c60f626 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 317 2.7E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 llmg_0699 c1796ad1a4a95d1f26d7a29c2c60f626 319 SUPERFAMILY SSF161098 92 300 6.02E-20 T 14-10-2018 IPR035906 MetI-like superfamily llmg_0704 64920abcdbb6bc0121701bebbb64e40e 67 Pfam PF04369 Lactococcin-like family 16 52 2.4E-6 T 14-10-2018 IPR007464 Bacteriocin, class IId GO:0005576|GO:0042742 llmg_0791 2fe6234f5f875232972d168896ffc6e3 208 Pfam PF12869 tRNA_anti-like 34 185 5.9E-14 T 14-10-2018 IPR024422 Protein of unknown function, OB-fold-containing llmg_2245 0327c7e9f6291b6655a7b597b887c1b5 93 Pfam PF11674 Protein of unknown function (DUF3270) 2 84 9.5E-20 T 14-10-2018 IPR021688 Protein of unknown function DUF3270 llmg_2093 1dcce14da673a745732e35e4429cf2f3 168 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 12 106 1.0E-5 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component llmg_0959 0cc368bbc1e59f77c60dd5bd404068c4 184 SUPERFAMILY SSF51445 8 175 5.29E-63 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily llmg_0959 0cc368bbc1e59f77c60dd5bd404068c4 184 Pfam PF00232 Glycosyl hydrolase family 1 6 183 1.0E-57 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 llmg_0959 0cc368bbc1e59f77c60dd5bd404068c4 184 Gene3D G3DSA:3.20.20.80 2 184 8.1E-64 T 14-10-2018 llmg_0381 356823c4fab794a24df9f156eac95cea 268 PIRSF PIRSF009141 1 268 1.8E-107 T 14-10-2018 IPR008535 Protein of unknown function DUF817 llmg_0381 356823c4fab794a24df9f156eac95cea 268 Pfam PF05675 Protein of unknown function (DUF817) 13 246 4.9E-82 T 14-10-2018 IPR008535 Protein of unknown function DUF817 llmg_1095 c07eaadc318b8e7d2c10637ae7287ec9 247 Pfam PF13731 WxL domain surface cell wall-binding 8 244 1.6E-43 T 14-10-2018 IPR027994 WxL domain llmg_0063 7120dacab0812372496a8ac3768bc6ef 540 SUPERFAMILY SSF52091 429 532 7.85E-17 T 14-10-2018 IPR036513 STAS domain superfamily llmg_0063 7120dacab0812372496a8ac3768bc6ef 540 Pfam PF00916 Sulfate permease family 21 383 1.9E-73 T 14-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 llmg_0063 7120dacab0812372496a8ac3768bc6ef 540 Pfam PF01740 STAS domain 436 530 9.5E-15 T 14-10-2018 IPR002645 STAS domain llmg_0063 7120dacab0812372496a8ac3768bc6ef 540 Gene3D G3DSA:3.30.750.24 420 539 2.9E-22 T 14-10-2018 IPR036513 STAS domain superfamily llmg_1799 c7a6a41f194e477398a3d405fc9bf281 232 Pfam PF04172 LrgB-like family 15 227 2.4E-69 T 14-10-2018 IPR007300 CidB/LrgB family llmg_0476 4def5b13d0584c8d6772a01335bf4949 290 Pfam PF06210 Protein of unknown function (DUF1003) 119 217 1.1E-34 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 llmg_0149 27667ff4f8a4614d58e36f3a226be071 226 Pfam PF02517 CAAX protease self-immunity 121 213 5.2E-11 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 llmg_0198 c41132c88971841b83fc491abc603bae 375 Pfam PF02517 CAAX protease self-immunity 106 205 1.2E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 llmg_2170 308044e8811dedd5e347f5735765719a 105 Pfam PF03477 ATP cone domain 9 99 8.2E-14 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 llmg_0474 3ae6e353d76ff84e277e3a3388deee74 152 Pfam PF14317 YcxB-like protein 85 146 1.4E-7 T 14-10-2018 IPR025588 YcxB-like protein llmg_0155 5b2d6c3881589ecdcfe2c4fa2e7780d5 103 Pfam PF10078 Uncharacterized protein conserved in bacteria (DUF2316) 1 89 7.1E-35 T 14-10-2018 IPR018757 Protein of unknown function DUF2316 llmg_1353 6c64dc0b53250c11a45f23b0d67f3549 365 Pfam PF05816 Toxic anion resistance protein (TelA) 37 361 1.6E-78 T 14-10-2018 IPR008863 Toxic anion resistance llmg_1353 6c64dc0b53250c11a45f23b0d67f3549 365 PIRSF PIRSF026508 1 365 5.7E-81 T 14-10-2018 IPR008863 Toxic anion resistance llmg_0599 0b6c2cef93d7553a31dbf868caa3cb6a 535 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 129 281 1.8E-8 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like llmg_0599 0b6c2cef93d7553a31dbf868caa3cb6a 535 TIGRFAM TIGR03766 TIGR03766: conserved hypothetical integral membrane protein 9 492 1.6E-149 T 14-10-2018 IPR021200 Conserved hypothetical integral membrane protein llmg_1330 a53127b123f2a5d14c29e0ce938b2a9f 222 Gene3D G3DSA:1.10.1760.20 23 199 3.1E-6 T 14-10-2018 llmg_1976 04bbe18f63a33ae4e047f9d6a5f841b3 441 ProSitePatterns PS01348 MraY family signature 2. 186 197 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 llmg_1976 04bbe18f63a33ae4e047f9d6a5f841b3 441 Pfam PF00953 Glycosyl transferase family 4 111 268 7.5E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 llmg_1941 9736f075a28218022f143491dc993129 219 Pfam PF09335 SNARE associated Golgi protein 49 178 2.3E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein llmg_0227 fe5b78c8b0e57e16b02eb3b9b052e675 351 Pfam PF09913 Predicted membrane protein (DUF2142) 48 307 1.8E-24 T 14-10-2018 IPR018674 Protein of unknown function DUF2142, membrane llmg_0772 e3252e31a176b95013d04c600872f159 669 Hamap MF_01941 Mid-cell-anchored protein Z [mapZ]. 1 667 22.233 T 14-10-2018 IPR030858 Mid-cell-anchored protein Z GO:0016021|GO:0051301 llmg_0119 a366a638800e13b71d590b42d76b1283 220 SMART SM00563 51 160 1.1E-16 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 llmg_0119 a366a638800e13b71d590b42d76b1283 220 Pfam PF01553 Acyltransferase 38 157 4.4E-15 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 llmg_0119 a366a638800e13b71d590b42d76b1283 220 SUPERFAMILY SSF69593 18 211 1.15E-42 T 14-10-2018 llmg_2106 c0eae7944f9d40e0f4672249736980e2 61 Gene3D G3DSA:1.10.260.40 9 60 2.6E-7 T 14-10-2018 llmg_2106 c0eae7944f9d40e0f4672249736980e2 61 SUPERFAMILY SSF47413 5 59 4.22E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 llmg_2168 92e3178b7b505c0abf3342ace3669665 219 Pfam PF03458 UPF0126 domain 10 83 3.3E-20 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 llmg_2168 92e3178b7b505c0abf3342ace3669665 219 Pfam PF03458 UPF0126 domain 109 184 1.2E-22 T 14-10-2018 IPR005115 Uncharacterised domain UPF0126 llmg_0921 afc3d9c7498a16030e6c49f5e1d860e7 252 Pfam PF13731 WxL domain surface cell wall-binding 26 247 4.5E-56 T 14-10-2018 IPR027994 WxL domain llmg_0706 29207b50e4cd7ae10da15f43447b6904 93 Pfam PF08951 Enterocin A Immunity 8 72 6.3E-13 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_1618 2b7f8bdb50d308a12d90013f3ac78323 445 SUPERFAMILY SSF53474 106 215 8.64E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold llmg_0821 8a9023aa4d731afc8e8f6eb92bd3fc87 141 Pfam PF05263 Protein of unknown function (DUF722) 1 135 2.5E-43 T 14-10-2018 IPR007927 Protein of unknown function DUF722 llmg_0399 603045f70cf2e34d78ed4271a3b57cad 680 Pfam PF00999 Sodium/hydrogen exchanger family 9 405 2.0E-41 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 llmg_1147 a956db888f9a8285ad5ad5fb1ab42656 107 Gene3D G3DSA:1.10.260.40 4 70 5.4E-7 T 14-10-2018 llmg_0495 7e26eea53bb96b9beee27bae0f72d72a 218 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 32 215 3.4E-58 T 14-10-2018 IPR018672 Protein of unknown function DUF2140 llmg_1161 bd332959e7057fb03f13eadefce3b7db 157 SUPERFAMILY SSF52266 85 148 8.24E-7 T 14-10-2018 llmg_0798 d04f3ea76457e4cd2ddba058963bf6ff 78 Pfam PF12728 Helix-turn-helix domain 8 59 2.8E-6 T 14-10-2018 llmg_2151 81b4c971bf83f3870c452ae6e116a1be 248 Pfam PF06224 Winged helix DNA-binding domain 2 227 1.3E-33 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 llmg_1522 1f4955a6523f9ce623b670c7786e4b92 545 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 187 313 1.1E-7 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like llmg_1349 8263d694661c2496928dff8850773eba 356 Pfam PF04332 Protein of unknown function (DUF475) 42 350 2.2E-113 T 14-10-2018 IPR007427 Protein of unknown function DUF475 llmg_0283 8a7febf56cc098254f8d4ec5db599093 169 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 4 93 1.2E-15 T 14-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 llmg_0215 073b8959dc3b74384ac9d8a2abb0af30 463 Pfam PF09913 Predicted membrane protein (DUF2142) 29 400 4.7E-23 T 14-10-2018 IPR018674 Protein of unknown function DUF2142, membrane llmg_1563 fdd11421ff9e0000d9a7a601f03834cd 444 Pfam PF05656 Protein of unknown function (DUF805) 12 138 9.6E-14 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 llmg_2349 6fa9233513e40b41d733bd4a3f4839f8 307 Pfam PF01531 Glycosyl transferase family 11 9 293 1.5E-20 T 14-10-2018 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 MetaCyc: PWY-7831|MetaCyc: PWY-7833 llmg_1480 a750568b93500340ff1bcab861d1f07c 339 Pfam PF04332 Protein of unknown function (DUF475) 42 338 1.3E-128 T 14-10-2018 IPR007427 Protein of unknown function DUF475 llmg_0889 e9d158caebe7918d72b6137ea0b40e3a 232 Pfam PF13398 Peptidase M50B-like 38 219 5.0E-36 T 14-10-2018 llmg_0777 0ebfcc4e4702c403c276a42e4f8a3240 186 Pfam PF02674 Colicin V production protein 3 164 1.5E-25 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 llmg_0502 dc722bc22bb063b093274897e9430260 241 Pfam PF01061 ABC-2 type transporter 9 199 2.5E-14 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 llmg_0792 3b535f1fa6647bdb976f7db8115ab191 145 Pfam PF06114 IrrE N-terminal-like domain 34 90 2.5E-5 T 14-10-2018 IPR010359 IrrE N-terminal-like domain llmg_2427 0b250815894fc26d47f85d6d481ae4b1 163 SUPERFAMILY SSF88946 7 92 3.14E-5 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 llmg_0954 a3b4f3cb88ef9c03c318f24666c68b1a 89 Pfam PF08951 Enterocin A Immunity 7 75 2.9E-19 T 14-10-2018 IPR015046 Enterocin A Immunity llmg_2144 10d3aaaad29c202781c2ec81f924ed5c 62 Pfam PF10031 Small integral membrane protein (DUF2273) 4 50 2.3E-16 T 14-10-2018 IPR018730 Protein of unknown function DUF2273 llmg_1051 edcb35eaf1891d4bd0b85c2fb99f4ed5 191 Gene3D G3DSA:1.10.357.10 4 175 4.9E-7 T 14-10-2018 llmg_2244 d5a2d0721cfe7f32e465b2d7a827acd7 323 Pfam PF01136 Peptidase family U32 88 319 5.4E-45 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 llmg_0477 d4bd586bb2b5b7ddf7884b3589ed536c 66 Pfam PF11151 Protein of unknown function (DUF2929) 7 60 1.9E-14 T 14-10-2018 IPR021324 Protein of unknown function DUF2929 llmg_0907 518c8c96136b80894903374cabfe5364 176 Pfam PF02620 Uncharacterized ACR, COG1399 54 174 1.9E-23 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD llmg_0116 426884c33ae60d77eb6c532bf9751dd0 334 Pfam PF06736 Protein of unknown function (DUF1211) 132 213 3.6E-18 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 llmg_0922 f6115ebc6a0a0094f9438ea998199e49 251 Pfam PF13731 WxL domain surface cell wall-binding 30 249 1.4E-51 T 14-10-2018 IPR027994 WxL domain llmg_1434 bfd6f594a0182ec0d3b20d4fdeee8466 174 Pfam PF13731 WxL domain surface cell wall-binding 36 157 2.2E-6 T 14-10-2018 IPR027994 WxL domain llmg_1911 110bcc17d49a86c489ad5540c67b40ca 361 Pfam PF02698 DUF218 domain 187 324 1.7E-25 T 14-10-2018 IPR003848 Domain of unknown function DUF218 llmg_2540 22790afd6dd824e7db7a01482b2e23f3 170 Pfam PF04394 Protein of unknown function, DUF536 112 153 4.6E-12 T 14-10-2018 IPR007489 Domain of unknown function DUF536