locus-tag class description CT113_00025 PF06458 MucBP domain CT113_00045 PF00005 ABC transporter CT113_00045 PF17755 UvrA DNA-binding domain CT113_00045 PF17760 UvrA interaction domain CT113_00065 PF13936 Helix-turn-helix domain CT113_00085 PF03577 Peptidase family C69 CT113_00090 PF13545 Crp-like helix-turn-helix domain CT113_00090 PF00027 Cyclic nucleotide-binding domain CT113_00095 PF13537 Glutamine amidotransferase domain CT113_00095 PF00733 Asparagine synthase CT113_00105 PF01177 Asp/Glu/Hydantoin racemase CT113_00110 PF00381 PTS HPr component phosphorylation site CT113_00110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CT113_00120 PF03611 PTS system sugar-specific permease component CT113_00125 PF02780 Transketolase, C-terminal domain CT113_00125 PF02779 Transketolase, pyrimidine binding domain CT113_00125 PF00456 Transketolase, thiamine diphosphate binding domain CT113_00130 PF02896 PEP-utilising enzyme, TIM barrel domain CT113_00130 PF00391 PEP-utilising enzyme, mobile domain CT113_00130 PF05524 PEP-utilising enzyme, N-terminal CT113_00140 PF07457 Protein of unknown function (DUF1516) CT113_00150 PF01510 N-acetylmuramoyl-L-alanine amidase CT113_00150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT113_00150 PF13457 GW (Gly-Tryp) dipeptide domain CT113_00165 PF00750 tRNA synthetases class I (R) CT113_00165 PF05746 DALR anticodon binding domain CT113_00165 PF03485 Arginyl tRNA synthetase N terminal domain CT113_00170 PF01316 Arginine repressor, DNA binding domain CT113_00170 PF02863 Arginine repressor, C-terminal domain CT113_00175 PF00905 Penicillin binding protein transpeptidase domain CT113_00175 PF00912 Transglycosylase CT113_00180 PF06133 Control of competence regulator ComK, YlbF/YmcA CT113_00185 PF00149 Calcineurin-like phosphoesterase CT113_00190 PF13514 AAA domain CT113_00195 PF01966 HD domain CT113_00200 PF00639 PPIC-type PPIASE domain CT113_00210 PF01230 HIT domain CT113_00215 PF00005 ABC transporter CT113_00225 PF01636 Phosphotransferase enzyme family CT113_00230 PF02390 Putative methyltransferase CT113_00240 PF08439 Oligopeptidase F CT113_00240 PF01432 Peptidase family M3 CT113_00245 PF02645 Uncharacterised protein, DegV family COG1307 CT113_00255 PF04607 Region found in RelA / SpoT proteins CT113_00260 PF01513 ATP-NAD kinase CT113_00265 PF00849 RNA pseudouridylate synthase CT113_00290 PF00534 Glycosyl transferases group 1 CT113_00295 PF00534 Glycosyl transferases group 1 CT113_00305 PF03932 CutC family CT113_00310 PF01594 AI-2E family transporter CT113_00320 PF00588 SpoU rRNA Methylase family CT113_00325 PF09397 Ftsk gamma domain CT113_00325 PF01580 FtsK/SpoIIIE family CT113_00325 PF17854 FtsK alpha domain CT113_00340 PF02381 MraZ protein, putative antitoxin-like CT113_00345 PF01795 MraW methylase family CT113_00355 PF03717 Penicillin-binding Protein dimerisation domain CT113_00355 PF00905 Penicillin binding protein transpeptidase domain CT113_00355 PF03793 PASTA domain CT113_00360 PF00953 Glycosyl transferase family 4 CT113_00360 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CT113_00365 PF08245 Mur ligase middle domain CT113_00365 PF02875 Mur ligase family, glutamate ligase domain CT113_00370 PF04101 Glycosyltransferase family 28 C-terminal domain CT113_00370 PF03033 Glycosyltransferase family 28 N-terminal domain CT113_00375 PF03799 Cell division protein FtsQ CT113_00375 PF08478 POTRA domain, FtsQ-type CT113_00380 PF02491 SHS2 domain inserted in FTSA CT113_00380 PF11983 Membrane-attachment and polymerisation-promoting switch CT113_00385 PF12327 FtsZ family, C-terminal domain CT113_00385 PF00091 Tubulin/FtsZ family, GTPase domain CT113_00390 PF04472 Cell division protein SepF CT113_00405 PF05103 DivIVA protein CT113_00410 PF00133 tRNA synthetases class I (I, L, M and V) CT113_00410 PF06827 Zinc finger found in FPG and IleRS CT113_00410 PF08264 Anticodon-binding domain of tRNA CT113_00415 PF00313 'Cold-shock' DNA-binding domain CT113_00420 PF00293 NUDIX domain CT113_00430 PF01048 Phosphorylase superfamily CT113_00435 PF00266 Aminotransferase class-V CT113_00460 PF13538 UvrD-like helicase C-terminal domain CT113_00460 PF14490 Helix-hairpin-helix containing domain CT113_00460 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CT113_00465 PF14572 Phosphoribosyl synthetase-associated domain CT113_00465 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CT113_00475 PF00528 Binding-protein-dependent transport system inner membrane component CT113_00480 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT113_00485 PF01425 Amidase CT113_00490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_00495 PF01380 SIS domain CT113_00500 PF00248 Aldo/keto reductase family CT113_00505 PF00356 Bacterial regulatory proteins, lacI family CT113_00510 PF00294 pfkB family carbohydrate kinase CT113_00510 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CT113_00515 PF00456 Transketolase, thiamine diphosphate binding domain CT113_00515 PF02779 Transketolase, pyrimidine binding domain CT113_00515 PF02780 Transketolase, C-terminal domain CT113_00520 PF00877 NlpC/P60 family CT113_00520 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CT113_00530 PF01476 LysM domain CT113_00530 PF00877 NlpC/P60 family CT113_00540 PF00781 Diacylglycerol kinase catalytic domain CT113_00545 PF00753 Metallo-beta-lactamase superfamily CT113_00545 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CT113_00545 PF17770 Ribonuclease J C-terminal domain CT113_00550 PF07288 Protein of unknown function (DUF1447) CT113_00560 PF01327 Polypeptide deformylase CT113_00565 PF00676 Dehydrogenase E1 component CT113_00570 PF02779 Transketolase, pyrimidine binding domain CT113_00570 PF02780 Transketolase, C-terminal domain CT113_00575 PF02817 e3 binding domain CT113_00575 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CT113_00575 PF00364 Biotin-requiring enzyme CT113_00580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_00580 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_00595 PF00459 Inositol monophosphatase family CT113_00600 PF14492 Elongation Factor G, domain II CT113_00600 PF00009 Elongation factor Tu GTP binding domain CT113_00600 PF03144 Elongation factor Tu domain 2 CT113_00600 PF00679 Elongation factor G C-terminus CT113_00605 PF01098 Cell cycle protein CT113_00610 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CT113_00620 PF01467 Cytidylyltransferase-like CT113_00625 PF05362 Lon protease (S16) C-terminal proteolytic domain CT113_00625 PF13180 PDZ domain CT113_00630 PF10531 SLBB domain CT113_00635 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT113_00640 PF00753 Metallo-beta-lactamase superfamily CT113_00640 PF13567 Domain of unknown function (DUF4131) CT113_00640 PF03772 Competence protein CT113_00645 PF06144 DNA polymerase III, delta subunit CT113_00650 PF13936 Helix-turn-helix domain CT113_00665 PF01649 Ribosomal protein S20 CT113_00670 PF00312 Ribosomal protein S15 CT113_00675 PF17770 Ribonuclease J C-terminal domain CT113_00675 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CT113_00675 PF00753 Metallo-beta-lactamase superfamily CT113_00685 PF03143 Elongation factor Tu C-terminal domain CT113_00685 PF03144 Elongation factor Tu domain 2 CT113_00685 PF00009 Elongation factor Tu GTP binding domain CT113_00690 PF05697 Bacterial trigger factor protein (TF) CT113_00690 PF05698 Bacterial trigger factor protein (TF) C-terminus CT113_00690 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CT113_00695 PF07724 AAA domain (Cdc48 subfamily) CT113_00695 PF10431 C-terminal, D2-small domain, of ClpB protein CT113_00695 PF06689 ClpX C4-type zinc finger CT113_00700 PF01926 50S ribosome-binding GTPase CT113_00715 PF01541 GIY-YIG catalytic domain CT113_00715 PF02151 UvrB/uvrC motif CT113_00715 PF08459 UvrC Helix-hairpin-helix N-terminal CT113_00720 PF01926 50S ribosome-binding GTPase CT113_00720 PF09269 Domain of unknown function (DUF1967) CT113_00720 PF01018 GTP1/OBG CT113_00735 PF00753 Metallo-beta-lactamase superfamily CT113_00740 PF06305 Lipopolysaccharide assembly protein A domain CT113_00745 PF17768 RecJ OB domain CT113_00745 PF01368 DHH family CT113_00745 PF02272 DHHA1 domain CT113_00745 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CT113_00750 PF00156 Phosphoribosyl transferase domain CT113_00755 PF00582 Universal stress protein family CT113_00770 PF00781 Diacylglycerol kinase catalytic domain CT113_00820 PF10548 P22AR C-terminal domain CT113_00820 PF08346 AntA/AntB antirepressor CT113_00855 PF00436 Single-strand binding protein family CT113_01015 PF01464 Transglycosylase SLT domain CT113_01080 PF00334 Nucleoside diphosphate kinase CT113_01090 PF00300 Histidine phosphatase superfamily (branch 1) CT113_01095 PF03976 Polyphosphate kinase 2 (PPK2) CT113_01100 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal CT113_01100 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal CT113_01115 PF01726 LexA DNA binding domain CT113_01115 PF00717 Peptidase S24-like CT113_01120 PF05979 Bacterial protein of unknown function (DUF896) CT113_01125 PF03672 Uncharacterised protein family (UPF0154) CT113_01130 PF00664 ABC transporter transmembrane region CT113_01130 PF00005 ABC transporter CT113_01135 PF00005 ABC transporter CT113_01135 PF00664 ABC transporter transmembrane region CT113_01140 PF01553 Acyltransferase CT113_01145 PF05175 Methyltransferase small domain CT113_01150 PF01541 GIY-YIG catalytic domain CT113_01155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT113_01155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT113_01165 PF00318 Ribosomal protein S2 CT113_01170 PF00889 Elongation factor TS CT113_01175 PF00696 Amino acid kinase family CT113_01180 PF01765 Ribosome recycling factor CT113_01190 PF01255 Putative undecaprenyl diphosphate synthase CT113_01200 PF17820 PDZ domain CT113_01200 PF02163 Peptidase family M50 CT113_01205 PF03129 Anticodon binding domain CT113_01205 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT113_01205 PF04073 Aminoacyl-tRNA editing domain CT113_01210 PF14480 DNA polymerase III polC-type N-terminus I CT113_01210 PF11490 DNA polymerase III polC-type N-terminus II CT113_01210 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT113_01210 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT113_01210 PF14579 Helix-hairpin-helix motif CT113_01210 PF00929 Exonuclease CT113_01210 PF02811 PHP domain CT113_01220 PF02576 RimP N-terminal domain CT113_01220 PF17384 RimP C-terminal SH3 domain CT113_01225 PF08529 NusA N-terminal domain CT113_01225 PF00575 S1 RNA binding domain CT113_01225 PF13184 NusA-like KH domain CT113_01230 PF04296 Protein of unknown function (DUF448) CT113_01235 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CT113_01240 PF04760 Translation initiation factor IF-2, N-terminal region CT113_01240 PF11987 Translation-initiation factor 2 CT113_01240 PF00009 Elongation factor Tu GTP binding domain CT113_01245 PF02033 Ribosome-binding factor A CT113_01250 PF16198 tRNA pseudouridylate synthase B C-terminal domain CT113_01250 PF01509 TruB family pseudouridylate synthase (N terminal domain) CT113_01255 PF01687 Riboflavin kinase CT113_01255 PF06574 FAD synthetase CT113_01260 PF01628 HrcA protein C terminal domain CT113_01260 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CT113_01265 PF01025 GrpE CT113_01270 PF00012 Hsp70 protein CT113_01275 PF00226 DnaJ domain CT113_01275 PF00684 DnaJ central domain CT113_01275 PF01556 DnaJ C terminal domain CT113_01285 PF00501 AMP-binding enzyme CT113_01285 PF13193 AMP-binding enzyme C-terminal domain CT113_01290 PF03062 MBOAT, membrane-bound O-acyltransferase family CT113_01295 PF00550 Phosphopantetheine attachment site CT113_01300 PF04914 DltD protein CT113_01305 PF03144 Elongation factor Tu domain 2 CT113_01305 PF06421 GTP-binding protein LepA C-terminus CT113_01305 PF00009 Elongation factor Tu GTP binding domain CT113_01305 PF00679 Elongation factor G C-terminus CT113_01310 PF14659 Phage integrase, N-terminal SAM-like domain CT113_01310 PF00589 Phage integrase family CT113_01340 PF00665 Integrase core domain CT113_01340 PF13936 Helix-turn-helix domain CT113_01370 PF01381 Helix-turn-helix CT113_01440 PF05866 Endodeoxyribonuclease RusA CT113_01480 PF00582 Universal stress protein family CT113_01660 PF04226 Transglycosylase associated protein CT113_01675 PF03780 Asp23 family, cell envelope-related function CT113_01680 PF03780 Asp23 family, cell envelope-related function CT113_01735 PF04452 RNA methyltransferase CT113_01745 PF13291 ACT domain CT113_01745 PF04607 Region found in RelA / SpoT proteins CT113_01745 PF02824 TGS domain CT113_01750 PF02580 D-Tyr-tRNA(Tyr) deacylase CT113_01760 PF03881 Fructosamine kinase CT113_01765 PF01520 N-acetylmuramoyl-L-alanine amidase CT113_01765 PF08239 Bacterial SH3 domain CT113_01775 PF03129 Anticodon binding domain CT113_01775 PF13393 Histidyl-tRNA synthetase CT113_01780 PF01336 OB-fold nucleic acid binding domain CT113_01780 PF02938 GAD domain CT113_01780 PF00152 tRNA synthetases class II (D, K and N) CT113_01785 PF01625 Peptide methionine sulfoxide reductase CT113_01790 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT113_01790 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT113_01795 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CT113_01800 PF01061 ABC-2 type transporter CT113_01805 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CT113_01810 PF01261 Xylose isomerase-like TIM barrel CT113_01815 PF03618 Kinase/pyrophosphorylase CT113_01820 PF01165 Ribosomal protein S21 CT113_01825 PF00107 Zinc-binding dehydrogenase CT113_01825 PF08240 Alcohol dehydrogenase GroES-like domain CT113_01830 PF01638 HxlR-like helix-turn-helix CT113_01835 PF09424 Yqey-like protein CT113_01840 PF02562 PhoH-like protein CT113_01845 PF02130 Uncharacterized protein family UPF0054 CT113_01850 PF01219 Prokaryotic diacylglycerol kinase CT113_01855 PF01926 50S ribosome-binding GTPase CT113_01855 PF07650 KH domain CT113_01860 PF02565 Recombination protein O C terminal CT113_01860 PF11967 Recombination protein O N terminal CT113_01865 PF02091 Glycyl-tRNA synthetase alpha subunit CT113_01870 PF02092 Glycyl-tRNA synthetase beta subunit CT113_01875 PF01807 CHC2 zinc finger CT113_01875 PF10410 DnaB-helicase binding domain of primase CT113_01875 PF08275 DNA primase catalytic core, N-terminal domain CT113_01880 PF04539 Sigma-70 region 3 CT113_01880 PF04542 Sigma-70 region 2 CT113_01880 PF04545 Sigma-70, region 4 CT113_01880 PF00140 Sigma-70 factor, region 1.2 CT113_01880 PF03979 Sigma-70 factor, region 1.1 CT113_01885 PF02082 Transcriptional regulator CT113_01890 PF03176 MMPL family CT113_01895 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CT113_01900 PF01784 NIF3 (NGG1p interacting factor 3) CT113_01905 PF01546 Peptidase family M20/M25/M40 CT113_01905 PF07687 Peptidase dimerisation domain CT113_01910 PF17871 AAA lid domain CT113_01910 PF07724 AAA domain (Cdc48 subfamily) CT113_01910 PF10431 C-terminal, D2-small domain, of ClpB protein CT113_01910 PF00004 ATPase family associated with various cellular activities (AAA) CT113_01910 PF02861 Clp amino terminal domain, pathogenicity island component CT113_01915 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT113_01915 PF01336 OB-fold nucleic acid binding domain CT113_01915 PF14579 Helix-hairpin-helix motif CT113_01915 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT113_01915 PF02811 PHP domain CT113_01925 PF00391 PEP-utilising enzyme, mobile domain CT113_01925 PF02887 Pyruvate kinase, alpha/beta domain CT113_01925 PF00224 Pyruvate kinase, barrel domain CT113_01930 PF13509 S1 domain CT113_01930 PF17783 CvfB-like winged helix domain CT113_01935 PF02899 Phage integrase, N-terminal SAM-like domain CT113_01935 PF00589 Phage integrase family CT113_01945 PF02616 Segregation and condensation protein ScpA CT113_01950 PF04079 Segregation and condensation complex subunit ScpB CT113_01955 PF00849 RNA pseudouridylate synthase CT113_01955 PF01479 S4 domain CT113_01960 PF12822 ECF transporter, substrate-specific component CT113_01970 PF00270 DEAD/DEAH box helicase CT113_01970 PF00271 Helicase conserved C-terminal domain CT113_01975 PF01476 LysM domain CT113_01975 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT113_01980 PF02224 Cytidylate kinase CT113_01985 PF00575 S1 RNA binding domain CT113_01990 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CT113_01990 PF01926 50S ribosome-binding GTPase CT113_01995 PF00216 Bacterial DNA-binding protein CT113_02005 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT113_02005 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT113_02010 PF12627 Probable RNA and SrmB- binding site of polymerase A CT113_02010 PF13735 tRNA nucleotidyltransferase domain 2 putative CT113_02010 PF01743 Poly A polymerase head domain CT113_02015 PF16326 ABC transporter C-terminal domain CT113_02015 PF00005 ABC transporter CT113_02015 PF12848 ABC transporter CT113_02020 PF00303 Thymidylate synthase CT113_02025 PF00186 Dihydrofolate reductase CT113_02030 PF03006 Haemolysin-III related CT113_02035 PF02645 Uncharacterised protein, DegV family COG1307 CT113_02040 PF13472 GDSL-like Lipase/Acylhydrolase family CT113_02050 PF06855 YozE SAM-like fold CT113_02055 PF07690 Major Facilitator Superfamily CT113_02065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_02065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_02080 PF00293 NUDIX domain CT113_02080 PF09297 NADH pyrophosphatase zinc ribbon domain CT113_02085 PF01926 50S ribosome-binding GTPase CT113_02090 PF01351 Ribonuclease HII CT113_02095 PF02481 DNA recombination-mediator protein A CT113_02095 PF18255 DNA processing protein A sterile alpha motif domain CT113_02100 PF01396 Topoisomerase DNA binding C4 zinc finger CT113_02100 PF01131 DNA topoisomerase CT113_02100 PF01751 Toprim domain CT113_02105 PF00589 Phage integrase family CT113_02105 PF02899 Phage integrase, N-terminal SAM-like domain CT113_02110 PF00227 Proteasome subunit CT113_02115 PF10431 C-terminal, D2-small domain, of ClpB protein CT113_02115 PF07724 AAA domain (Cdc48 subfamily) CT113_02115 PF00004 ATPase family associated with various cellular activities (AAA) CT113_02125 PF02660 Glycerol-3-phosphate acyltransferase CT113_02130 PF01751 Toprim domain CT113_02130 PF00986 DNA gyrase B subunit, carboxyl terminus CT113_02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_02130 PF00204 DNA gyrase B CT113_02135 PF00521 DNA gyrase/topoisomerase IV, subunit A CT113_02135 PF03989 DNA gyrase C-terminal domain, beta-propeller CT113_02140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_02140 PF03466 LysR substrate binding domain CT113_02145 PF01368 DHH family CT113_02145 PF02833 DHHA2 domain CT113_02155 PF01641 SelR domain CT113_02160 PF01625 Peptide methionine sulfoxide reductase CT113_02170 PF13495 Phage integrase, N-terminal SAM-like domain CT113_02170 PF00589 Phage integrase family CT113_02175 PF16859 Tetracyclin repressor-like, C-terminal domain CT113_02175 PF00440 Bacterial regulatory proteins, tetR family CT113_02205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_02205 PF03466 LysR substrate binding domain CT113_02210 PF03466 LysR substrate binding domain CT113_02210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_02215 PF00106 short chain dehydrogenase CT113_02225 PF00106 short chain dehydrogenase CT113_02230 PF08241 Methyltransferase domain CT113_02260 PF00109 Beta-ketoacyl synthase, N-terminal domain CT113_02260 PF00698 Acyl transferase domain CT113_02260 PF14765 Polyketide synthase dehydratase CT113_02260 PF00550 Phosphopantetheine attachment site CT113_02260 PF08659 KR domain CT113_02260 PF02801 Beta-ketoacyl synthase, C-terminal domain CT113_02260 PF16197 Ketoacyl-synthetase C-terminal extension CT113_02260 PF09277 Erythronolide synthase, docking CT113_02260 PF08990 Erythronolide synthase docking CT113_02260 PF08240 Alcohol dehydrogenase GroES-like domain CT113_02275 PF10576 Iron-sulfur binding domain of endonuclease III CT113_02275 PF00730 HhH-GPD superfamily base excision DNA repair protein CT113_02275 PF00633 Helix-hairpin-helix motif CT113_02290 PF04138 GtrA-like protein CT113_02295 PF12822 ECF transporter, substrate-specific component CT113_02300 PF02645 Uncharacterised protein, DegV family COG1307 CT113_02305 PF11700 Vacuole effluxer Atg22 like CT113_02315 PF01047 MarR family CT113_02320 PF05670 NFACT protein RNA binding domain CT113_02325 PF02142 MGS-like domain CT113_02325 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CT113_02325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT113_02330 PF00117 Glutamine amidotransferase class-I CT113_02330 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CT113_02335 PF00156 Phosphoribosyl transferase domain CT113_02340 PF01479 S4 domain CT113_02340 PF00849 RNA pseudouridylate synthase CT113_02345 PF01252 Signal peptidase (SPase) II CT113_02350 PF01268 Formate--tetrahydrofolate ligase CT113_02365 PF01266 FAD dependent oxidoreductase CT113_02390 PF00293 NUDIX domain CT113_02400 PF00909 Ammonium Transporter Family CT113_02410 PF02926 THUMP domain CT113_02410 PF01170 Putative RNA methylase family UPF0020 CT113_02420 PF05103 DivIVA protein CT113_02425 PF06908 YspA SLOG family CT113_02430 PF03838 Recombination protein U CT113_02435 PF00905 Penicillin binding protein transpeptidase domain CT113_02435 PF00912 Transglycosylase CT113_02440 PF00356 Bacterial regulatory proteins, lacI family CT113_02455 PF00155 Aminotransferase class I and II CT113_02465 PF13307 Helicase C-terminal domain CT113_02465 PF04851 Type III restriction enzyme, res subunit CT113_02465 PF00929 Exonuclease CT113_02470 PF08544 GHMP kinases C terminal CT113_02470 PF10509 Galactokinase galactose-binding signature CT113_02470 PF00288 GHMP kinases N terminal domain CT113_02480 PF00288 GHMP kinases N terminal domain CT113_02480 PF08544 GHMP kinases C terminal CT113_02485 PF01070 FMN-dependent dehydrogenase CT113_02490 PF01189 16S rRNA methyltransferase RsmB/F CT113_02490 PF17126 RsmF rRNA methyltransferase first C-terminal domain CT113_02490 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CT113_02500 PF07687 Peptidase dimerisation domain CT113_02500 PF01546 Peptidase family M20/M25/M40 CT113_02510 PF00248 Aldo/keto reductase family CT113_02515 PF00248 Aldo/keto reductase family CT113_02520 PF03466 LysR substrate binding domain CT113_02520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_02525 PF13823 Alcohol dehydrogenase GroES-associated CT113_02525 PF00107 Zinc-binding dehydrogenase CT113_02525 PF08240 Alcohol dehydrogenase GroES-like domain CT113_02540 PF13411 MerR HTH family regulatory protein CT113_02555 PF02705 K+ potassium transporter CT113_02560 PF07690 Major Facilitator Superfamily CT113_02565 PF00999 Sodium/hydrogen exchanger family CT113_02575 PF01070 FMN-dependent dehydrogenase CT113_02580 PF00440 Bacterial regulatory proteins, tetR family CT113_02590 PF00005 ABC transporter CT113_02615 PF01451 Low molecular weight phosphotyrosine protein phosphatase CT113_02625 PF02687 FtsX-like permease family CT113_02625 PF12704 MacB-like periplasmic core domain CT113_02625 PF00005 ABC transporter CT113_02655 PF13443 Cro/C1-type HTH DNA-binding domain CT113_02665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_02665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_02670 PF01361 Tautomerase enzyme CT113_02675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CT113_02675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CT113_02680 PF03577 Peptidase family C69 CT113_02685 PF13520 Amino acid permease CT113_02700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_02700 PF18113 Rubredoxin binding C-terminal domain CT113_02705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_02705 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_02720 PF06628 Catalase-related immune-responsive CT113_02720 PF00199 Catalase CT113_02725 PF00814 Glycoprotease family CT113_02725 PF00583 Acetyltransferase (GNAT) family CT113_02735 PF00248 Aldo/keto reductase family CT113_02740 PF13411 MerR HTH family regulatory protein CT113_02745 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system CT113_02750 PF07690 Major Facilitator Superfamily CT113_02775 PF07690 Major Facilitator Superfamily CT113_02785 PF13411 MerR HTH family regulatory protein CT113_02800 PF03819 MazG nucleotide pyrophosphohydrolase domain CT113_02805 PF02632 BioY family CT113_02820 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CT113_02825 PF01039 Carboxyl transferase domain CT113_02830 PF02785 Biotin carboxylase C-terminal domain CT113_02830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CT113_02830 PF00289 Biotin carboxylase, N-terminal domain CT113_02835 PF07977 FabA-like domain CT113_02840 PF00364 Biotin-requiring enzyme CT113_02845 PF02801 Beta-ketoacyl synthase, C-terminal domain CT113_02845 PF00109 Beta-ketoacyl synthase, N-terminal domain CT113_02855 PF00698 Acyl transferase domain CT113_02860 PF00550 Phosphopantetheine attachment site CT113_02865 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CT113_02865 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CT113_02875 PF07977 FabA-like domain CT113_02885 PF01245 Ribosomal protein L19 CT113_02890 PF01746 tRNA (Guanine-1)-methyltransferase CT113_02895 PF01782 RimM N-terminal domain CT113_02895 PF05239 PRC-barrel domain CT113_02905 PF00886 Ribosomal protein S16 CT113_02925 PF00690 Cation transporter/ATPase, N-terminus CT113_02925 PF00689 Cation transporting ATPase, C-terminus CT113_02930 PF02881 SRP54-type protein, helical bundle domain CT113_02930 PF00448 SRP54-type protein, GTPase domain CT113_02930 PF02978 Signal peptide binding domain CT113_02935 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CT113_02940 PF02881 SRP54-type protein, helical bundle domain CT113_02940 PF00448 SRP54-type protein, GTPase domain CT113_02945 PF02463 RecF/RecN/SMC N terminal domain CT113_02945 PF06470 SMC proteins Flexible Hinge Domain CT113_02950 PF00035 Double-stranded RNA binding motif CT113_02950 PF14622 Ribonuclease-III-like CT113_02955 PF00550 Phosphopantetheine attachment site CT113_02960 PF02504 Fatty acid synthesis protein CT113_02965 PF00270 DEAD/DEAH box helicase CT113_02965 PF17191 RecG wedge domain CT113_02965 PF00271 Helicase conserved C-terminal domain CT113_02970 PF02734 DAK2 domain CT113_02970 PF13684 Dihydroxyacetone kinase family CT113_02975 PF03780 Asp23 family, cell envelope-related function CT113_02980 PF00830 Ribosomal L28 family CT113_02985 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CT113_02985 PF04263 Thiamin pyrophosphokinase, catalytic domain CT113_02990 PF00834 Ribulose-phosphate 3 epimerase family CT113_02995 PF16745 RsgA N-terminal domain CT113_02995 PF03193 RsgA GTPase CT113_03000 PF00069 Protein kinase domain CT113_03000 PF03793 PASTA domain CT113_03010 PF01029 NusB family CT113_03010 PF01189 16S rRNA methyltransferase RsmB/F CT113_03015 PF00551 Formyl transferase CT113_03015 PF02911 Formyl transferase, C-terminal domain CT113_03020 PF17764 3′ DNA-binding domain (3′BD) CT113_03020 PF18074 Primosomal protein N C-terminal domain CT113_03020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CT113_03020 PF04851 Type III restriction enzyme, res subunit CT113_03020 PF00271 Helicase conserved C-terminal domain CT113_03025 PF04127 DNA / pantothenate metabolism flavoprotein CT113_03025 PF02441 Flavoprotein CT113_03030 PF01192 RNA polymerase Rpb6 CT113_03035 PF00625 Guanylate kinase CT113_03055 PF02463 RecF/RecN/SMC N terminal domain CT113_03060 PF01316 Arginine repressor, DNA binding domain CT113_03060 PF02863 Arginine repressor, C-terminal domain CT113_03065 PF01728 FtsJ-like methyltransferase CT113_03065 PF01479 S4 domain CT113_03070 PF00348 Polyprenyl synthetase CT113_03075 PF02609 Exonuclease VII small subunit CT113_03080 PF13742 OB-fold nucleic acid binding domain CT113_03080 PF02601 Exonuclease VII, large subunit CT113_03085 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CT113_03085 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CT113_03090 PF01029 NusB family CT113_03095 PF03780 Asp23 family, cell envelope-related function CT113_03100 PF09285 Elongation factor P, C-terminal CT113_03100 PF01132 Elongation factor P (EF-P) OB domain CT113_03100 PF08207 Elongation factor P (EF-P) KOW-like domain CT113_03105 PF01321 Creatinase/Prolidase N-terminal domain CT113_03105 PF00557 Metallopeptidase family M24 CT113_03110 PF01016 Ribosomal L27 protein CT113_03115 PF04327 Cysteine protease Prp CT113_03120 PF00829 Ribosomal prokaryotic L21 protein CT113_03145 PF00120 Glutamine synthetase, catalytic domain CT113_03145 PF03951 Glutamine synthetase, beta-Grasp domain CT113_03150 PF13411 MerR HTH family regulatory protein CT113_03160 PF03009 Glycerophosphoryl diester phosphodiesterase family CT113_03175 PF00480 ROK family CT113_03185 PF01694 Rhomboid family CT113_03190 PF01812 5-formyltetrahydrofolate cyclo-ligase family CT113_03195 PF00471 Ribosomal protein L33 CT113_03200 PF00905 Penicillin binding protein transpeptidase domain CT113_03200 PF03717 Penicillin-binding Protein dimerisation domain CT113_03205 PF04070 Domain of unknown function (DUF378) CT113_03220 PF03449 Transcription elongation factor, N-terminal CT113_03220 PF01272 Transcription elongation factor, GreA/GreB, C-term CT113_03225 PF00485 Phosphoribulokinase / Uridine kinase family CT113_03230 PF02618 YceG-like family CT113_03235 PF03147 Ferredoxin-fold anticodon binding domain CT113_03235 PF03484 tRNA synthetase B5 domain CT113_03235 PF03483 B3/4 domain CT113_03235 PF01588 Putative tRNA binding domain CT113_03235 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CT113_03240 PF01409 tRNA synthetases class II core domain (F) CT113_03240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CT113_03245 PF01638 HxlR-like helix-turn-helix CT113_03255 PF00588 SpoU rRNA Methylase family CT113_03255 PF08032 RNA 2'-O ribose methyltransferase substrate binding CT113_03260 PF00708 Acylphosphatase CT113_03265 PF02096 60Kd inner membrane protein CT113_03275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_03275 PF00512 His Kinase A (phospho-acceptor) domain CT113_03275 PF18719 ArlS sensor domain CT113_03285 PF08240 Alcohol dehydrogenase GroES-like domain CT113_03285 PF00107 Zinc-binding dehydrogenase CT113_03290 PF00413 Matrixin CT113_03295 PF01022 Bacterial regulatory protein, arsR family CT113_03305 PF01783 Ribosomal L32p protein family CT113_03315 PF05636 HIGH Nucleotidyl Transferase CT113_03320 PF13649 Methyltransferase domain CT113_03330 PF01966 HD domain CT113_03335 PF01467 Cytidylyltransferase-like CT113_03345 PF01926 50S ribosome-binding GTPase CT113_03360 PF00453 Ribosomal protein L20 CT113_03365 PF01632 Ribosomal protein L35 CT113_03370 PF05198 Translation initiation factor IF-3, N-terminal domain CT113_03370 PF00707 Translation initiation factor IF-3, C-terminal domain CT113_03375 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT113_03375 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT113_03375 PF02824 TGS domain CT113_03375 PF03129 Anticodon binding domain CT113_03380 PF01695 IstB-like ATP binding protein CT113_03380 PF07319 Primosomal protein DnaI N-terminus CT113_03390 PF03477 ATP cone domain CT113_03395 PF01121 Dephospho-CoA kinase CT113_03400 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CT113_03400 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CT113_03400 PF06827 Zinc finger found in FPG and IleRS CT113_03405 PF00476 DNA polymerase family A CT113_03405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CT113_03405 PF01367 5'-3' exonuclease, C-terminal SAM fold CT113_03410 PF01979 Amidohydrolase family CT113_03415 PF00860 Permease family CT113_03420 PF01027 Inhibitor of apoptosis-promoting Bax1 CT113_03425 PF04973 Nicotinamide mononucleotide transporter CT113_03430 PF08245 Mur ligase middle domain CT113_03430 PF02875 Mur ligase family, glutamate ligase domain CT113_03430 PF01225 Mur ligase family, catalytic domain CT113_03435 PF09397 Ftsk gamma domain CT113_03435 PF17854 FtsK alpha domain CT113_03435 PF01580 FtsK/SpoIIIE family CT113_03440 PF01588 Putative tRNA binding domain CT113_03440 PF14794 Domain of unknown function (DUF4479) CT113_03445 PF00085 Thioredoxin CT113_03455 PF00324 Amino acid permease CT113_03460 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CT113_03460 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CT113_03465 PF00582 Universal stress protein family CT113_03470 PF01546 Peptidase family M20/M25/M40 CT113_03475 PF01256 Carbohydrate kinase CT113_03480 PF01479 S4 domain CT113_03480 PF00849 RNA pseudouridylate synthase CT113_03485 PF14667 Polysaccharide biosynthesis C-terminal domain CT113_03485 PF01943 Polysaccharide biosynthesis protein CT113_03500 PF00005 ABC transporter CT113_03510 PF09334 tRNA synthetases class I (M) CT113_03510 PF00133 tRNA synthetases class I (I, L, M and V) CT113_03510 PF08264 Anticodon-binding domain of tRNA CT113_03510 PF13603 Leucyl-tRNA synthetase, Domain 2 CT113_03515 PF01569 PAP2 superfamily CT113_03520 PF06962 Putative rRNA methylase CT113_03530 PF00535 Glycosyl transferase family 2 CT113_03720 PF03592 Terminase small subunit CT113_03720 PF10668 Phage terminase small subunit CT113_03845 PF00772 DnaB-like helicase N terminal domain CT113_03845 PF03796 DnaB-like helicase C terminal domain CT113_03940 PF05389 Negative regulator of genetic competence (MecA) CT113_03945 PF03960 ArsC family CT113_03955 PF12706 Beta-lactamase superfamily domain CT113_04075 PF00575 S1 RNA binding domain CT113_04080 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CT113_04085 PF04608 Phosphatidylglycerophosphatase A CT113_04090 PF09335 SNARE associated Golgi protein CT113_04095 PF13411 MerR HTH family regulatory protein CT113_04105 PF00248 Aldo/keto reductase family CT113_04110 PF00106 short chain dehydrogenase CT113_04115 PF13520 Amino acid permease CT113_04140 PF13344 Haloacid dehalogenase-like hydrolase CT113_04145 PF06265 Protein of unknown function (DUF1027) CT113_04150 PF02872 5'-nucleotidase, C-terminal domain CT113_04160 PF00248 Aldo/keto reductase family CT113_04165 PF00324 Amino acid permease CT113_04170 PF00871 Acetokinase family CT113_04175 PF02384 N-6 DNA Methylase CT113_04195 PF07963 Prokaryotic N-terminal methylation motif CT113_04200 PF00482 Type II secretion system (T2SS), protein F CT113_04205 PF00437 Type II/IV secretion system protein CT113_04210 PF01709 Transcriptional regulator CT113_04215 PF00528 Binding-protein-dependent transport system inner membrane component CT113_04220 PF00005 ABC transporter CT113_04230 PF00356 Bacterial regulatory proteins, lacI family CT113_04235 PF00557 Metallopeptidase family M24 CT113_04235 PF01321 Creatinase/Prolidase N-terminal domain CT113_04250 PF00924 Mechanosensitive ion channel CT113_04255 PF07690 Major Facilitator Superfamily CT113_04300 PF01725 Ham1 family CT113_04305 PF01177 Asp/Glu/Hydantoin racemase CT113_04310 PF10702 Protein of unknown function (DUF2507) CT113_04315 PF00085 Thioredoxin CT113_04320 PF01713 Smr domain CT113_04320 PF00488 MutS domain V CT113_04335 PF06949 Protein of unknown function (DUF1292) CT113_04340 PF03652 Holliday junction resolvase CT113_04345 PF06135 IreB regulatory phosphoprotein CT113_04350 PF01411 tRNA synthetases class II (A) CT113_04350 PF02272 DHHA1 domain CT113_04350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CT113_04355 PF00271 Helicase conserved C-terminal domain CT113_04355 PF00270 DEAD/DEAH box helicase CT113_04360 PF01368 DHH family CT113_04360 PF02272 DHHA1 domain CT113_04365 PF00817 impB/mucB/samB family CT113_04365 PF11799 impB/mucB/samB family C-terminal domain CT113_04375 PF01702 Queuine tRNA-ribosyltransferase CT113_04380 PF02547 Queuosine biosynthesis protein CT113_04385 PF05491 RuvB C-terminal winged helix domain CT113_04385 PF17864 RuvB AAA lid domain CT113_04385 PF05496 Holliday junction DNA helicase RuvB P-loop domain CT113_04390 PF07499 RuvA, C-terminal domain CT113_04390 PF01330 RuvA N terminal domain CT113_04395 PF08676 MutL C terminal dimerisation domain CT113_04395 PF01119 DNA mismatch repair protein, C-terminal domain CT113_04400 PF05192 MutS domain III CT113_04400 PF05188 MutS domain II CT113_04400 PF00488 MutS domain V CT113_04400 PF01624 MutS domain I CT113_04400 PF05190 MutS family domain IV CT113_04405 PF13277 YmdB-like protein CT113_04410 PF12072 Domain of unknown function (DUF3552) CT113_04410 PF00013 KH domain CT113_04410 PF01966 HD domain CT113_04415 PF00154 recA bacterial DNA recombination protein CT113_04420 PF02464 Competence-damaged protein CT113_04420 PF00994 Probable molybdopterin binding domain CT113_04420 PF18146 Damage-inducible protein CinA KH domain CT113_04425 PF01066 CDP-alcohol phosphatidyltransferase CT113_04430 PF13464 Domain of unknown function (DUF4115) CT113_04435 PF05193 Peptidase M16 inactive domain CT113_04435 PF00675 Insulinase (Peptidase family M16) CT113_04440 PF05193 Peptidase M16 inactive domain CT113_04445 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT113_04450 PF00005 ABC transporter CT113_04455 PF00528 Binding-protein-dependent transport system inner membrane component CT113_04460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CT113_04465 PF03775 Septum formation inhibitor MinC, C-terminal domain CT113_04475 PF04085 rod shape-determining protein MreC CT113_04485 PF04002 RadC-like JAB domain CT113_04490 PF02875 Mur ligase family, glutamate ligase domain CT113_04490 PF08245 Mur ligase middle domain CT113_04495 PF10458 Valyl tRNA synthetase tRNA binding arm CT113_04495 PF00133 tRNA synthetases class I (I, L, M and V) CT113_04495 PF08264 Anticodon-binding domain of tRNA CT113_04500 PF08534 Redoxin CT113_04505 PF02568 Thiamine biosynthesis protein (ThiI) CT113_04505 PF02926 THUMP domain CT113_04510 PF00266 Aminotransferase class-V CT113_04515 PF06160 Septation ring formation regulator, EzrA CT113_04520 PF13185 GAF domain CT113_04525 PF01479 S4 domain CT113_04525 PF00163 Ribosomal protein S4/S9 N-terminal domain CT113_04535 PF06335 Protein of unknown function (DUF1054) CT113_04545 PF16193 AAA C-terminal domain CT113_04545 PF12002 MgsA AAA+ ATPase C terminal CT113_04545 PF05496 Holliday junction DNA helicase RuvB P-loop domain CT113_04555 PF00582 Universal stress protein family CT113_04570 PF01820 D-ala D-ala ligase N-terminus CT113_04570 PF07478 D-ala D-ala ligase C-terminus CT113_04585 PF01597 Glycine cleavage H-protein CT113_04590 PF01098 Cell cycle protein CT113_04600 PF01809 Putative membrane protein insertion efficiency factor CT113_04610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CT113_04620 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CT113_04620 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CT113_04625 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT113_04625 PF02874 ATP synthase alpha/beta family, beta-barrel domain CT113_04630 PF00231 ATP synthase CT113_04635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CT113_04635 PF02874 ATP synthase alpha/beta family, beta-barrel domain CT113_04635 PF00306 ATP synthase alpha/beta chain, C terminal domain CT113_04640 PF00213 ATP synthase delta (OSCP) subunit CT113_04645 PF00430 ATP synthase B/B' CF(0) CT113_04650 PF00137 ATP synthase subunit C CT113_04655 PF00119 ATP synthase A chain CT113_04665 PF00464 Serine hydroxymethyltransferase CT113_04670 PF03481 Putative GTP-binding controlling metal-binding CT113_04670 PF01300 Telomere recombination CT113_04675 PF05175 Methyltransferase small domain CT113_04675 PF17827 PrmC N-terminal domain CT113_04680 PF00472 RF-1 domain CT113_04680 PF03462 PCRF domain CT113_04685 PF00265 Thymidine kinase CT113_04690 PF08245 Mur ligase middle domain CT113_04690 PF08353 Domain of unknown function (DUF1727) CT113_04695 PF07685 CobB/CobQ-like glutamine amidotransferase domain CT113_04705 PF00005 ABC transporter CT113_04705 PF00664 ABC transporter transmembrane region CT113_04710 PF00005 ABC transporter CT113_04710 PF00664 ABC transporter transmembrane region CT113_04725 PF00990 Diguanylate cyclase, GGDEF domain CT113_04730 PF00563 EAL domain CT113_04730 PF00990 Diguanylate cyclase, GGDEF domain CT113_04730 PF01590 GAF domain CT113_04730 PF00360 Phytochrome region CT113_04735 PF03600 Citrate transporter CT113_04740 PF03496 ADP-ribosyltransferase exoenzyme CT113_04770 PF04860 Phage portal protein CT113_04835 PF00589 Phage integrase family CT113_04835 PF02899 Phage integrase, N-terminal SAM-like domain CT113_04850 PF06736 Protein of unknown function (DUF1211) CT113_04855 PF03073 TspO/MBR family CT113_04865 PF00342 Phosphoglucose isomerase CT113_04870 PF06800 Sugar transport protein CT113_04875 PF10672 S-adenosylmethionine-dependent methyltransferase CT113_04875 PF17785 PUA-like domain CT113_04880 PF00512 His Kinase A (phospho-acceptor) domain CT113_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_04880 PF00672 HAMP domain CT113_04885 PF00486 Transcriptional regulatory protein, C terminal CT113_04885 PF00072 Response regulator receiver domain CT113_04975 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CT113_04990 PF00356 Bacterial regulatory proteins, lacI family CT113_05000 PF10415 Fumarase C C-terminus CT113_05000 PF00206 Lyase CT113_05010 PF06993 Protein of unknown function (DUF1304) CT113_05035 PF04991 LicD family CT113_05045 PF13089 Polyphosphate kinase N-terminal domain CT113_05045 PF17941 Polyphosphate kinase C-terminal domain 1 CT113_05045 PF13090 Polyphosphate kinase C-terminal domain 2 CT113_05045 PF02503 Polyphosphate kinase middle domain CT113_05050 PF02541 Ppx/GppA phosphatase family CT113_05055 PF00005 ABC transporter CT113_05060 PF01032 FecCD transport family CT113_05065 PF01497 Periplasmic binding protein CT113_05090 PF00005 ABC transporter CT113_05105 PF13802 Galactose mutarotase-like CT113_05105 PF17137 Domain of unknown function (DUF5110) CT113_05105 PF01055 Glycosyl hydrolases family 31 CT113_05105 PF16338 Domain of unknown function (DUF4968) CT113_05110 PF00403 Heavy-metal-associated domain CT113_05115 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT113_05115 PF01476 LysM domain CT113_05120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CT113_05130 PF01380 SIS domain CT113_05135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CT113_05135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CT113_05135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CT113_05135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CT113_05145 PF02457 DisA bacterial checkpoint controller nucleotide-binding CT113_05155 PF00999 Sodium/hydrogen exchanger family CT113_05160 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CT113_05160 PF01565 FAD binding domain CT113_05165 PF03372 Endonuclease/Exonuclease/phosphatase family CT113_05170 PF02811 PHP domain CT113_05170 PF07733 Bacterial DNA polymerase III alpha NTPase domain CT113_05170 PF11490 DNA polymerase III polC-type N-terminus II CT113_05170 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CT113_05170 PF14480 DNA polymerase III polC-type N-terminus I CT113_05170 PF00929 Exonuclease CT113_05170 PF14579 Helix-hairpin-helix motif CT113_05175 PF00248 Aldo/keto reductase family CT113_05185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CT113_05190 PF01515 Phosphate acetyl/butaryl transferase CT113_05195 PF03167 Uracil DNA glycosylase superfamily CT113_05205 PF00005 ABC transporter CT113_05210 PF01668 SmpB protein CT113_05215 PF00773 RNB domain CT113_05215 PF08206 Ribonuclease B OB domain CT113_05215 PF00575 S1 RNA binding domain CT113_05215 PF17876 Cold shock domain CT113_05220 PF12146 Serine aminopeptidase, S33 CT113_05225 PF03840 Preprotein translocase SecG subunit CT113_05230 PF00654 Voltage gated chloride channel CT113_05240 PF00113 Enolase, C-terminal TIM barrel domain CT113_05240 PF03952 Enolase, N-terminal domain CT113_05245 PF00121 Triosephosphate isomerase CT113_05250 PF00162 Phosphoglycerate kinase CT113_05255 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CT113_05255 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CT113_05260 PF04198 Putative sugar-binding domain CT113_05270 PF12822 ECF transporter, substrate-specific component CT113_05290 PF00574 Clp protease CT113_05295 PF02650 WhiA C-terminal HTH domain CT113_05295 PF14527 WhiA LAGLIDADG-like domain CT113_05295 PF10298 WhiA N-terminal LAGLIDADG-like domain CT113_05300 PF01933 Uncharacterised protein family UPF0052 CT113_05305 PF03668 P-loop ATPase protein family CT113_05315 PF17760 UvrA interaction domain CT113_05315 PF00005 ABC transporter CT113_05315 PF17755 UvrA DNA-binding domain CT113_05320 PF04851 Type III restriction enzyme, res subunit CT113_05320 PF17757 UvrB interaction domain CT113_05320 PF00271 Helicase conserved C-terminal domain CT113_05320 PF12344 Ultra-violet resistance protein B CT113_05320 PF02151 UvrB/uvrC motif CT113_05335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_05340 PF00483 Nucleotidyl transferase CT113_05345 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CT113_05345 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CT113_05350 PF01790 Prolipoprotein diacylglyceryl transferase CT113_05355 PF02603 HPr Serine kinase N terminus CT113_05355 PF07475 HPr Serine kinase C-terminal domain CT113_05365 PF04024 PspC domain CT113_05370 PF01895 PhoU domain CT113_05375 PF00005 ABC transporter CT113_05380 PF00005 ABC transporter CT113_05385 PF00528 Binding-protein-dependent transport system inner membrane component CT113_05390 PF00528 Binding-protein-dependent transport system inner membrane component CT113_05395 PF12849 PBP superfamily domain CT113_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_05400 PF00512 His Kinase A (phospho-acceptor) domain CT113_05400 PF00672 HAMP domain CT113_05400 PF13426 PAS domain CT113_05405 PF00072 Response regulator receiver domain CT113_05405 PF00486 Transcriptional regulatory protein, C terminal CT113_05410 PF17820 PDZ domain CT113_05420 PF01043 SecA preprotein cross-linking domain CT113_05420 PF07517 SecA DEAD-like domain CT113_05420 PF07516 SecA Wing and Scaffold domain CT113_05425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CT113_05425 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CT113_05435 PF04851 Type III restriction enzyme, res subunit CT113_05435 PF00271 Helicase conserved C-terminal domain CT113_05440 PF09186 Domain of unknown function (DUF1949) CT113_05440 PF01205 Uncharacterized protein family UPF0029 CT113_05445 PF00953 Glycosyl transferase family 4 CT113_05450 PF03788 LrgA family CT113_05455 PF04172 LrgB-like family CT113_05460 PF13520 Amino acid permease CT113_05465 PF00118 TCP-1/cpn60 chaperonin family CT113_05470 PF00166 Chaperonin 10 Kd subunit CT113_05475 PF02629 CoA binding domain CT113_05475 PF06971 Putative DNA-binding protein N-terminus CT113_05480 PF12848 ABC transporter CT113_05480 PF16326 ABC transporter C-terminal domain CT113_05480 PF00005 ABC transporter CT113_05490 PF07690 Major Facilitator Superfamily CT113_05495 PF00814 Glycoprotease family CT113_05505 PF00814 Glycoprotease family CT113_05515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CT113_05520 PF06156 Initiation control protein YabA CT113_05525 PF09115 DNA polymerase III, delta subunit, C terminal CT113_05530 PF06153 Cyclic-di-AMP receptor CT113_05535 PF02223 Thymidylate kinase CT113_05545 PF13662 Toprim domain CT113_05545 PF02132 RecR protein CT113_05550 PF02575 YbaB/EbfC DNA-binding family CT113_05555 PF12169 DNA polymerase III subunits gamma and tau domain III CT113_05565 PF14437 MafB19-like deaminase CT113_05570 PF05175 Methyltransferase small domain CT113_05575 PF00462 Glutaredoxin CT113_05580 PF08343 Ribonucleotide reductase N-terminal CT113_05580 PF00317 Ribonucleotide reductase, all-alpha domain CT113_05580 PF02867 Ribonucleotide reductase, barrel domain CT113_05585 PF00268 Ribonucleotide reductase, small chain CT113_05590 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CT113_05590 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CT113_05595 PF03641 Possible lysine decarboxylase CT113_05600 PF03706 Lysylphosphatidylglycerol synthase TM region CT113_05600 PF09924 Uncharacterised conserved protein (DUF2156) CT113_05615 PF00535 Glycosyl transferase family 2 CT113_05620 PF00512 His Kinase A (phospho-acceptor) domain CT113_05620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_05625 PF00072 Response regulator receiver domain CT113_05625 PF00486 Transcriptional regulatory protein, C terminal CT113_05630 PF00542 Ribosomal protein L7/L12 C-terminal domain CT113_05630 PF16320 Ribosomal protein L7/L12 dimerisation domain CT113_05635 PF00466 Ribosomal protein L10 CT113_05640 PF00687 Ribosomal protein L1p/L10e family CT113_05645 PF03946 Ribosomal protein L11, N-terminal domain CT113_05645 PF00298 Ribosomal protein L11, RNA binding domain CT113_05650 PF02357 Transcription termination factor nusG CT113_05650 PF00467 KOW motif CT113_05660 PF00471 Ribosomal protein L33 CT113_05670 PF05991 YacP-like NYN domain CT113_05675 PF00588 SpoU rRNA Methylase family CT113_05675 PF08032 RNA 2'-O ribose methyltransferase substrate binding CT113_05680 PF00636 Ribonuclease III domain CT113_05685 PF09190 DALR domain CT113_05685 PF01406 tRNA synthetases class I (C) catalytic domain CT113_05690 PF00749 tRNA synthetases class I (E and Q), catalytic domain CT113_05700 PF18073 Rubredoxin metal binding domain CT113_05705 PF00692 dUTPase CT113_05715 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CT113_05720 PF03051 Peptidase C1-like family CT113_05730 PF00300 Histidine phosphatase superfamily (branch 1) CT113_05735 PF00892 EamA-like transporter family CT113_05745 PF03816 Cell envelope-related transcriptional attenuator domain CT113_05750 PF01297 Zinc-uptake complex component A periplasmic CT113_05770 PF00990 Diguanylate cyclase, GGDEF domain CT113_05775 PF01594 AI-2E family transporter CT113_05780 PF03613 PTS system mannose/fructose/sorbose family IID component CT113_05785 PF03609 PTS system sorbose-specific iic component CT113_05790 PF03610 PTS system fructose IIA component CT113_05790 PF03830 PTS system sorbose subfamily IIB component CT113_05795 PF03830 PTS system sorbose subfamily IIB component CT113_05795 PF03610 PTS system fructose IIA component CT113_05800 PF13419 Haloacid dehalogenase-like hydrolase CT113_05805 PF01554 MatE CT113_05825 PF00561 alpha/beta hydrolase fold CT113_05840 PF08544 GHMP kinases C terminal CT113_05840 PF00288 GHMP kinases N terminal domain CT113_05845 PF10263 SprT-like family CT113_05850 PF09371 Tex-like protein N-terminal domain CT113_05850 PF17674 HHH domain CT113_05850 PF00575 S1 RNA binding domain CT113_05850 PF16921 Tex protein YqgF-like domain CT113_05860 PF02540 NAD synthase CT113_05865 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CT113_05865 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CT113_05865 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CT113_05870 PF03808 Glycosyl transferase WecB/TagA/CpsF family CT113_05880 PF07702 UTRA domain CT113_05880 PF00392 Bacterial regulatory proteins, gntR family CT113_05885 PF01979 Amidohydrolase family CT113_05890 PF03807 NADP oxidoreductase coenzyme F420-dependent CT113_05890 PF14748 Pyrroline-5-carboxylate reductase dimerisation CT113_05910 PF00854 POT family CT113_05955 PF01207 Dihydrouridine synthase (Dus) CT113_05960 PF01430 Hsp33 protein CT113_05965 PF17862 AAA+ lid domain CT113_05965 PF06480 FtsH Extracellular CT113_05965 PF01434 Peptidase family M41 CT113_05965 PF00004 ATPase family associated with various cellular activities (AAA) CT113_05970 PF00156 Phosphoribosyl transferase domain CT113_05975 PF11734 TilS substrate C-terminal domain CT113_05975 PF01171 PP-loop family CT113_05980 PF00575 S1 RNA binding domain CT113_05985 PF13936 Helix-turn-helix domain CT113_05995 PF01479 S4 domain CT113_06000 PF01943 Polysaccharide biosynthesis protein CT113_06000 PF14667 Polysaccharide biosynthesis C-terminal domain CT113_06005 PF03461 TRCF domain CT113_06005 PF17757 UvrB interaction domain CT113_06005 PF00271 Helicase conserved C-terminal domain CT113_06005 PF00270 DEAD/DEAH box helicase CT113_06005 PF02559 CarD-like/TRCF domain CT113_06010 PF01195 Peptidyl-tRNA hydrolase CT113_06015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CT113_06015 PF00056 lactate/malate dehydrogenase, NAD binding domain CT113_06030 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CT113_06040 PF01168 Alanine racemase, N-terminal domain CT113_06040 PF00842 Alanine racemase, C-terminal domain CT113_06045 PF01648 4'-phosphopantetheinyl transferase superfamily CT113_06055 PF00270 DEAD/DEAH box helicase CT113_06055 PF00271 Helicase conserved C-terminal domain CT113_06060 PF02875 Mur ligase family, glutamate ligase domain CT113_06060 PF08245 Mur ligase middle domain CT113_06060 PF01225 Mur ligase family, catalytic domain CT113_06070 PF01435 Peptidase family M48 CT113_06075 PF04011 LemA family CT113_06080 PF01451 Low molecular weight phosphotyrosine protein phosphatase CT113_06100 PF13936 Helix-turn-helix domain CT113_06145 PF04203 Sortase domain CT113_06150 PF01197 Ribosomal protein L31 CT113_06155 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CT113_06165 PF03306 Alpha-acetolactate decarboxylase CT113_06170 PF00205 Thiamine pyrophosphate enzyme, central domain CT113_06170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT113_06170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT113_06190 PF06418 CTP synthase N-terminus CT113_06190 PF00117 Glutamine amidotransferase class-I CT113_06195 PF05066 HB1, ASXL, restriction endonuclease HTH domain CT113_06205 PF03099 Biotin/lipoate A/B protein ligase family CT113_06210 PF01966 HD domain CT113_06220 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CT113_06220 PF09363 XFP C-terminal domain CT113_06220 PF09364 XFP N-terminal domain CT113_06225 PF07702 UTRA domain CT113_06225 PF00392 Bacterial regulatory proteins, gntR family CT113_06240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CT113_06240 PF14572 Phosphoribosyl synthetase-associated domain CT113_06245 PF00483 Nucleotidyl transferase CT113_06245 PF00132 Bacterial transferase hexapeptide (six repeats) CT113_06250 PF00156 Phosphoribosyl transferase domain CT113_06250 PF09182 Bacterial purine repressor, N-terminal CT113_06260 PF00950 ABC 3 transport family CT113_06265 PF00005 ABC transporter CT113_06280 PF00072 Response regulator receiver domain CT113_06280 PF04397 LytTr DNA-binding domain CT113_06285 PF00005 ABC transporter CT113_06305 PF00480 ROK family CT113_06310 PF00232 Glycosyl hydrolase family 1 CT113_06335 PF13802 Galactose mutarotase-like CT113_06335 PF01055 Glycosyl hydrolases family 31 CT113_06340 PF03167 Uracil DNA glycosylase superfamily CT113_06345 PF08544 GHMP kinases C terminal CT113_06345 PF00288 GHMP kinases N terminal domain CT113_06350 PF06257 Biofilm formation stimulator VEG CT113_06355 PF00398 Ribosomal RNA adenine dimethylase CT113_06360 PF13331 Domain of unknown function (DUF4093) CT113_06365 PF01026 TatD related DNase CT113_06370 PF08264 Anticodon-binding domain of tRNA CT113_06370 PF09334 tRNA synthetases class I (M) CT113_06370 PF01588 Putative tRNA binding domain CT113_06375 PF01904 Protein of unknown function DUF72 CT113_06385 PF02146 Sir2 family CT113_06395 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CT113_06400 PF02541 Ppx/GppA phosphatase family CT113_06405 PF00579 tRNA synthetases class I (W and Y) CT113_06410 PF13538 UvrD-like helicase C-terminal domain CT113_06425 PF00356 Bacterial regulatory proteins, lacI family CT113_06430 PF01380 SIS domain CT113_06435 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CT113_06440 PF00294 pfkB family carbohydrate kinase CT113_06460 PF00999 Sodium/hydrogen exchanger family CT113_06475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_06475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_06495 PF04239 Protein of unknown function (DUF421) CT113_06500 PF00293 NUDIX domain CT113_06525 PF01479 S4 domain CT113_06525 PF00579 tRNA synthetases class I (W and Y) CT113_06580 PF03703 Bacterial PH domain CT113_06590 PF02595 Glycerate kinase family CT113_06595 PF02447 GntP family permease CT113_06600 PF13556 PucR C-terminal helix-turn-helix domain CT113_06600 PF17853 GGDEF-like domain CT113_06600 PF05651 Putative sugar diacid recognition CT113_06610 PF00005 ABC transporter CT113_06615 PF00392 Bacterial regulatory proteins, gntR family CT113_06650 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CT113_06655 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase CT113_06655 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CT113_06660 PF04223 Citrate lyase, alpha subunit (CitF) CT113_06665 PF03328 HpcH/HpaI aldolase/citrate lyase family CT113_06670 PF06857 Malonate decarboxylase delta subunit (MdcD) CT113_06675 PF08218 Citrate lyase ligase C-terminal domain CT113_06685 PF03949 Malic enzyme, NAD binding domain CT113_06685 PF00390 Malic enzyme, N-terminal domain CT113_06700 PF00005 ABC transporter CT113_06700 PF12848 ABC transporter CT113_06710 PF07690 Major Facilitator Superfamily CT113_06715 PF03466 LysR substrate binding domain CT113_06715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_06720 PF03601 Conserved hypothetical protein 698 CT113_06730 PF01022 Bacterial regulatory protein, arsR family CT113_06735 PF07732 Multicopper oxidase CT113_06735 PF07731 Multicopper oxidase CT113_06745 PF00403 Heavy-metal-associated domain CT113_06770 PF00005 ABC transporter CT113_06775 PF00248 Aldo/keto reductase family CT113_06780 PF07690 Major Facilitator Superfamily CT113_06785 PF01638 HxlR-like helix-turn-helix CT113_06795 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CT113_06795 PF00535 Glycosyl transferase family 2 CT113_06800 PF02082 Transcriptional regulator CT113_06815 PF02311 AraC-like ligand binding domain CT113_06815 PF12833 Helix-turn-helix domain CT113_06820 PF04616 Glycosyl hydrolases family 43 CT113_06820 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CT113_06835 PF01925 Sulfite exporter TauE/SafE CT113_06850 PF08239 Bacterial SH3 domain CT113_06850 PF00877 NlpC/P60 family CT113_06850 PF01476 LysM domain CT113_06855 PF03960 ArsC family CT113_06880 PF01263 Aldose 1-epimerase CT113_06885 PF00253 Ribosomal protein S14p/S29e CT113_06895 PF03633 Glycosyl hydrolase family 65, C-terminal domain CT113_06895 PF03632 Glycosyl hydrolase family 65 central catalytic domain CT113_06895 PF03636 Glycosyl hydrolase family 65, N-terminal domain CT113_06905 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CT113_06905 PF00356 Bacterial regulatory proteins, lacI family CT113_06910 PF00512 His Kinase A (phospho-acceptor) domain CT113_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_06915 PF00072 Response regulator receiver domain CT113_06915 PF00486 Transcriptional regulatory protein, C terminal CT113_06930 PF00999 Sodium/hydrogen exchanger family CT113_06940 PF04607 Region found in RelA / SpoT proteins CT113_06945 PF07690 Major Facilitator Superfamily CT113_06965 PF03466 LysR substrate binding domain CT113_06965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_06975 PF02378 Phosphotransferase system, EIIC CT113_06985 PF02664 S-Ribosylhomocysteinase (LuxS) CT113_06990 PF07859 alpha/beta hydrolase fold CT113_07000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CT113_07005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CT113_07010 PF02583 Metal-sensitive transcriptional repressor CT113_07015 PF00085 Thioredoxin CT113_07020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_07020 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_07025 PF02645 Uncharacterised protein, DegV family COG1307 CT113_07035 PF01566 Natural resistance-associated macrophage protein CT113_07055 PF00294 pfkB family carbohydrate kinase CT113_07060 PF03812 2-keto-3-deoxygluconate permease CT113_07070 PF04962 KduI/IolB family CT113_07085 PF09339 IclR helix-turn-helix domain CT113_07085 PF01614 Bacterial transcriptional regulator CT113_07090 PF00171 Aldehyde dehydrogenase family CT113_07100 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CT113_07100 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CT113_07105 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_07110 PF13460 NAD(P)H-binding CT113_07120 PF00072 Response regulator receiver domain CT113_07120 PF00486 Transcriptional regulatory protein, C terminal CT113_07125 PF18719 ArlS sensor domain CT113_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_07125 PF00512 His Kinase A (phospho-acceptor) domain CT113_07140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CT113_07140 PF00205 Thiamine pyrophosphate enzyme, central domain CT113_07140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CT113_07160 PF16657 Maltogenic Amylase, C-terminal domain CT113_07160 PF00128 Alpha amylase, catalytic domain CT113_07165 PF00005 ABC transporter CT113_07170 PF02687 FtsX-like permease family CT113_07170 PF12704 MacB-like periplasmic core domain CT113_07175 PF01594 AI-2E family transporter CT113_07190 PF00535 Glycosyl transferase family 2 CT113_07205 PF00155 Aminotransferase class I and II CT113_07210 PF04261 Dyp-type peroxidase family CT113_07215 PF07690 Major Facilitator Superfamily CT113_07230 PF00005 ABC transporter CT113_07230 PF00571 CBS domain CT113_07235 PF00528 Binding-protein-dependent transport system inner membrane component CT113_07240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CT113_07245 PF00528 Binding-protein-dependent transport system inner membrane component CT113_07260 PF14552 Tautomerase enzyme CT113_07265 PF17760 UvrA interaction domain CT113_07265 PF17755 UvrA DNA-binding domain CT113_07265 PF00005 ABC transporter CT113_07290 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT113_07295 PF10502 Signal peptidase, peptidase S26 CT113_07300 PF06100 MCRA family CT113_07310 PF01757 Acyltransferase family CT113_07315 PF00962 Adenosine/AMP deaminase CT113_07325 PF01522 Polysaccharide deacetylase CT113_07335 PF00403 Heavy-metal-associated domain CT113_07340 PF00248 Aldo/keto reductase family CT113_07345 PF07943 Penicillin-binding protein 5, C-terminal domain CT113_07345 PF00768 D-alanyl-D-alanine carboxypeptidase CT113_07350 PF03965 Penicillinase repressor CT113_07360 PF00892 EamA-like transporter family CT113_07370 PF14602 Hexapeptide repeat of succinyl-transferase CT113_07370 PF12464 Maltose acetyltransferase CT113_07380 PF03577 Peptidase family C69 CT113_07385 PF00689 Cation transporting ATPase, C-terminus CT113_07385 PF00690 Cation transporter/ATPase, N-terminus CT113_07400 PF01717 Cobalamin-independent synthase, Catalytic domain CT113_07410 PF00005 ABC transporter CT113_07410 PF00571 CBS domain CT113_07420 PF08240 Alcohol dehydrogenase GroES-like domain CT113_07420 PF00107 Zinc-binding dehydrogenase CT113_07425 PF01546 Peptidase family M20/M25/M40 CT113_07425 PF07687 Peptidase dimerisation domain CT113_07445 PF00324 Amino acid permease CT113_07455 PF00258 Flavodoxin CT113_07460 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase CT113_07460 PF12241 Trans-2-enoyl-CoA reductase catalytic region CT113_07460 PF07055 Enoyl reductase FAD binding domain CT113_07465 PF01207 Dihydrouridine synthase (Dus) CT113_07485 PF00857 Isochorismatase family CT113_07500 PF08532 Beta-galactosidase trimerisation domain CT113_07500 PF08533 Beta-galactosidase C-terminal domain CT113_07500 PF02449 Beta-galactosidase CT113_07505 PF02311 AraC-like ligand binding domain CT113_07505 PF12833 Helix-turn-helix domain CT113_07510 PF14310 Fibronectin type III-like domain CT113_07510 PF00933 Glycosyl hydrolase family 3 N terminal domain CT113_07510 PF01915 Glycosyl hydrolase family 3 C-terminal domain CT113_07525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_07525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_07540 PF07722 Peptidase C26 CT113_07555 PF07859 alpha/beta hydrolase fold CT113_07560 PF13350 Tyrosine phosphatase family CT113_07570 PF00440 Bacterial regulatory proteins, tetR family CT113_07570 PF08359 YsiA-like protein, C-terminal region CT113_07580 PF00171 Aldehyde dehydrogenase family CT113_07590 PF10397 Adenylosuccinate lyase C-terminus CT113_07590 PF00206 Lyase CT113_07595 PF00709 Adenylosuccinate synthetase CT113_07600 PF00478 IMP dehydrogenase / GMP reductase domain CT113_07610 PF01566 Natural resistance-associated macrophage protein CT113_07645 PF01047 MarR family CT113_07650 PF13673 Acetyltransferase (GNAT) domain CT113_07665 PF03551 Transcriptional regulator PadR-like family CT113_07665 PF10400 Virulence activator alpha C-term CT113_07670 PF05870 Phenolic acid decarboxylase (PAD) CT113_07680 PF00293 NUDIX domain CT113_07680 PF13344 Haloacid dehalogenase-like hydrolase CT113_07695 PF00440 Bacterial regulatory proteins, tetR family CT113_07705 PF00072 Response regulator receiver domain CT113_07710 PF17203 Single cache domain 3 CT113_07710 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CT113_07710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_07710 PF00989 PAS fold CT113_07715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT113_07715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT113_07725 PF03553 Na+/H+ antiporter family CT113_07740 PF00248 Aldo/keto reductase family CT113_07755 PF07687 Peptidase dimerisation domain CT113_07755 PF01546 Peptidase family M20/M25/M40 CT113_07760 PF01161 Phosphatidylethanolamine-binding protein CT113_07775 PF08818 Domain of unknown function (DU1801) CT113_07780 PF00106 short chain dehydrogenase CT113_07785 PF00083 Sugar (and other) transporter CT113_07790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_07790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_07815 PF03099 Biotin/lipoate A/B protein ligase family CT113_07815 PF10437 Bacterial lipoate protein ligase C-terminus CT113_07825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT113_07825 PF00005 ABC transporter CT113_07830 PF00005 ABC transporter CT113_07830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT113_07835 PF00528 Binding-protein-dependent transport system inner membrane component CT113_07840 PF00528 Binding-protein-dependent transport system inner membrane component CT113_07845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_07855 PF07690 Major Facilitator Superfamily CT113_07865 PF00582 Universal stress protein family CT113_07870 PF00849 RNA pseudouridylate synthase CT113_07900 PF01272 Transcription elongation factor, GreA/GreB, C-term CT113_07900 PF03449 Transcription elongation factor, N-terminal CT113_07910 PF00392 Bacterial regulatory proteins, gntR family CT113_07910 PF07702 UTRA domain CT113_07915 PF04073 Aminoacyl-tRNA editing domain CT113_07955 PF02614 Glucuronate isomerase CT113_07960 PF16257 tagaturonate epimerase CT113_07970 PF00356 Bacterial regulatory proteins, lacI family CT113_07975 PF03786 D-mannonate dehydratase (UxuA) CT113_07980 PF00392 Bacterial regulatory proteins, gntR family CT113_07980 PF07729 FCD domain CT113_07985 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT113_07985 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CT113_07990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_07990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_07995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT113_07995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT113_08000 PF00300 Histidine phosphatase superfamily (branch 1) CT113_08010 PF01232 Mannitol dehydrogenase Rossmann domain CT113_08010 PF08125 Mannitol dehydrogenase C-terminal domain CT113_08035 PF02614 Glucuronate isomerase CT113_08040 PF00294 pfkB family carbohydrate kinase CT113_08050 PF02447 GntP family permease CT113_08055 PF00703 Glycosyl hydrolases family 2 CT113_08055 PF02837 Glycosyl hydrolases family 2, sugar binding domain CT113_08055 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CT113_08060 PF13802 Galactose mutarotase-like CT113_08060 PF17137 Domain of unknown function (DUF5110) CT113_08060 PF01055 Glycosyl hydrolases family 31 CT113_08060 PF16338 Domain of unknown function (DUF4968) CT113_08070 PF02614 Glucuronate isomerase CT113_08075 PF01554 MatE CT113_08080 PF01966 HD domain CT113_08085 PF00005 ABC transporter CT113_08085 PF13732 Domain of unknown function (DUF4162) CT113_08105 PF00871 Acetokinase family CT113_08110 PF00294 pfkB family carbohydrate kinase CT113_08130 PF00295 Glycosyl hydrolases family 28 CT113_08145 PF07470 Glycosyl Hydrolase Family 88 CT113_08155 PF01476 LysM domain CT113_08155 PF00877 NlpC/P60 family CT113_08165 PF00877 NlpC/P60 family CT113_08165 PF01476 LysM domain CT113_08170 PF00171 Aldehyde dehydrogenase family CT113_08170 PF00465 Iron-containing alcohol dehydrogenase CT113_08190 PF00248 Aldo/keto reductase family CT113_08195 PF13520 Amino acid permease CT113_08200 PF00011 Hsp20/alpha crystallin family CT113_08210 PF01595 Cyclin M transmembrane N-terminal domain CT113_08210 PF03471 Transporter associated domain CT113_08210 PF00571 CBS domain CT113_08215 PF00106 short chain dehydrogenase CT113_08220 PF00440 Bacterial regulatory proteins, tetR family CT113_08225 PF00356 Bacterial regulatory proteins, lacI family CT113_08240 PF07690 Major Facilitator Superfamily CT113_08245 PF00005 ABC transporter CT113_08245 PF12848 ABC transporter CT113_08250 PF07972 NrdI Flavodoxin like CT113_08255 PF00881 Nitroreductase family CT113_08265 PF07690 Major Facilitator Superfamily CT113_08270 PF13460 NAD(P)H-binding CT113_08275 PF07690 Major Facilitator Superfamily CT113_08280 PF07690 Major Facilitator Superfamily CT113_08290 PF00248 Aldo/keto reductase family CT113_08295 PF00171 Aldehyde dehydrogenase family CT113_08305 PF02522 Aminoglycoside 3-N-acetyltransferase CT113_08310 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CT113_08310 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CT113_08330 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CT113_08330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT113_08365 PF13460 NAD(P)H-binding CT113_08375 PF00578 AhpC/TSA family CT113_08380 PF00375 Sodium:dicarboxylate symporter family CT113_08405 PF00749 tRNA synthetases class I (E and Q), catalytic domain CT113_08410 PF00282 Pyridoxal-dependent decarboxylase conserved domain CT113_08415 PF13520 Amino acid permease CT113_08455 PF01336 OB-fold nucleic acid binding domain CT113_08455 PF00152 tRNA synthetases class II (D, K and N) CT113_08460 PF08245 Mur ligase middle domain CT113_08460 PF02875 Mur ligase family, glutamate ligase domain CT113_08475 PF00501 AMP-binding enzyme CT113_08475 PF13193 AMP-binding enzyme C-terminal domain CT113_08480 PF00378 Enoyl-CoA hydratase/isomerase CT113_08525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_08550 PF14602 Hexapeptide repeat of succinyl-transferase CT113_08550 PF12464 Maltose acetyltransferase CT113_08555 PF03747 ADP-ribosylglycohydrolase CT113_08560 PF07859 alpha/beta hydrolase fold CT113_08565 PF01047 MarR family CT113_08575 PF07690 Major Facilitator Superfamily CT113_08585 PF00005 ABC transporter CT113_08585 PF12848 ABC transporter CT113_08595 PF00106 short chain dehydrogenase CT113_08605 PF07690 Major Facilitator Superfamily CT113_08610 PF00877 NlpC/P60 family CT113_08625 PF00639 PPIC-type PPIASE domain CT113_08635 PF13673 Acetyltransferase (GNAT) domain CT113_08640 PF02872 5'-nucleotidase, C-terminal domain CT113_08640 PF17936 Bacterial Ig domain CT113_08640 PF00149 Calcineurin-like phosphoesterase CT113_08660 PF13936 Helix-turn-helix domain CT113_08670 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CT113_08675 PF13936 Helix-turn-helix domain CT113_08695 PF02590 Predicted SPOUT methyltransferase CT113_08700 PF13180 PDZ domain CT113_08705 PF00753 Metallo-beta-lactamase superfamily CT113_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_08720 PF13426 PAS domain CT113_08720 PF00512 His Kinase A (phospho-acceptor) domain CT113_08720 PF00672 HAMP domain CT113_08725 PF00072 Response regulator receiver domain CT113_08725 PF00486 Transcriptional regulatory protein, C terminal CT113_08745 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_08755 PF07690 Major Facilitator Superfamily CT113_08760 PF03358 NADPH-dependent FMN reductase CT113_08770 PF00772 DnaB-like helicase N terminal domain CT113_08770 PF03796 DnaB-like helicase C terminal domain CT113_08775 PF04616 Glycosyl hydrolases family 43 CT113_08775 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CT113_08785 PF00480 ROK family CT113_08790 PF01281 Ribosomal protein L9, N-terminal domain CT113_08790 PF03948 Ribosomal protein L9, C-terminal domain CT113_08795 PF02272 DHHA1 domain CT113_08795 PF01368 DHH family CT113_08815 PF00440 Bacterial regulatory proteins, tetR family CT113_08820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_08825 PF01979 Amidohydrolase family CT113_08835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_08845 PF01084 Ribosomal protein S18 CT113_08850 PF00436 Single-strand binding protein family CT113_08855 PF01250 Ribosomal protein S6 CT113_08860 PF00521 DNA gyrase/topoisomerase IV, subunit A CT113_08860 PF03989 DNA gyrase C-terminal domain, beta-propeller CT113_08865 PF01751 Toprim domain CT113_08865 PF00204 DNA gyrase B CT113_08865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_08865 PF00986 DNA gyrase B subunit, carboxyl terminus CT113_08870 PF02463 RecF/RecN/SMC N terminal domain CT113_08880 PF02768 DNA polymerase III beta subunit, C-terminal domain CT113_08880 PF02767 DNA polymerase III beta subunit, central domain CT113_08880 PF00712 DNA polymerase III beta subunit, N-terminal domain CT113_08885 PF11638 DnaA N-terminal domain CT113_08885 PF08299 Bacterial dnaA protein helix-turn-helix CT113_08885 PF00308 Bacterial dnaA protein CT113_08890 PF00468 Ribosomal protein L34 CT113_08895 PF00825 Ribonuclease P CT113_08900 PF02096 60Kd inner membrane protein CT113_08910 PF10396 GTP-binding protein TrmE N-terminus CT113_08910 PF01926 50S ribosome-binding GTPase CT113_08910 PF12631 MnmE helical domain CT113_08915 PF13932 GidA associated domain CT113_08915 PF01134 Glucose inhibited division protein A CT113_08930 PF13419 Haloacid dehalogenase-like hydrolase CT113_08940 PF05525 Branched-chain amino acid transport protein CT113_08950 PF13302 Acetyltransferase (GNAT) domain CT113_08955 PF03061 Thioesterase superfamily CT113_08965 PF07690 Major Facilitator Superfamily CT113_08970 PF10502 Signal peptidase, peptidase S26 CT113_08975 PF01047 MarR family CT113_08980 PF03051 Peptidase C1-like family CT113_09020 PF13396 Phospholipase_D-nuclease N-terminal CT113_09020 PF13091 PLD-like domain CT113_09025 PF12833 Helix-turn-helix domain CT113_09025 PF06719 AraC-type transcriptional regulator N-terminus CT113_09035 PF04616 Glycosyl hydrolases family 43 CT113_09035 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CT113_09055 PF13936 Helix-turn-helix domain CT113_09075 PF09586 Bacterial membrane protein YfhO CT113_09090 PF00005 ABC transporter CT113_09090 PF13732 Domain of unknown function (DUF4162) CT113_09095 PF01047 MarR family CT113_09100 PF00860 Permease family CT113_09105 PF00248 Aldo/keto reductase family CT113_09120 PF01522 Polysaccharide deacetylase CT113_09120 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CT113_09125 PF01546 Peptidase family M20/M25/M40 CT113_09125 PF07687 Peptidase dimerisation domain CT113_09130 PF12705 PD-(D/E)XK nuclease superfamily CT113_09135 PF13361 UvrD-like helicase C-terminal domain CT113_09135 PF00580 UvrD/REP helicase N-terminal domain CT113_09135 PF12705 PD-(D/E)XK nuclease superfamily CT113_09145 PF12833 Helix-turn-helix domain CT113_09145 PF02311 AraC-like ligand binding domain CT113_09160 PF00746 LPXTG cell wall anchor motif CT113_09165 PF05368 NmrA-like family CT113_09170 PF02082 Transcriptional regulator CT113_09175 PF00703 Glycosyl hydrolases family 2 CT113_09175 PF02837 Glycosyl hydrolases family 2, sugar binding domain CT113_09175 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CT113_09180 PF02929 Beta galactosidase small chain CT113_09225 PF00107 Zinc-binding dehydrogenase CT113_09225 PF08240 Alcohol dehydrogenase GroES-like domain CT113_09245 PF07690 Major Facilitator Superfamily CT113_09250 PF02525 Flavodoxin-like fold CT113_09260 PF06458 MucBP domain CT113_09265 PF03358 NADPH-dependent FMN reductase CT113_09300 PF12464 Maltose acetyltransferase CT113_09300 PF00132 Bacterial transferase hexapeptide (six repeats) CT113_09305 PF00248 Aldo/keto reductase family CT113_09320 PF02311 AraC-like ligand binding domain CT113_09320 PF12833 Helix-turn-helix domain CT113_09335 PF00155 Aminotransferase class I and II CT113_09340 PF14492 Elongation Factor G, domain II CT113_09340 PF00679 Elongation factor G C-terminus CT113_09340 PF03764 Elongation factor G, domain IV CT113_09340 PF00009 Elongation factor Tu GTP binding domain CT113_09370 PF00392 Bacterial regulatory proteins, gntR family CT113_09370 PF07702 UTRA domain CT113_09375 PF03747 ADP-ribosylglycohydrolase CT113_09385 PF00294 pfkB family carbohydrate kinase CT113_09400 PF07690 Major Facilitator Superfamily CT113_09405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CT113_09410 PF00156 Phosphoribosyl transferase domain CT113_09415 PF03883 Peroxide stress protein YaaA CT113_09425 PF12833 Helix-turn-helix domain CT113_09435 PF04226 Transglycosylase associated protein CT113_09450 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CT113_09465 PF02803 Thiolase, C-terminal domain CT113_09465 PF00108 Thiolase, N-terminal domain CT113_09480 PF01479 S4 domain CT113_09480 PF00579 tRNA synthetases class I (W and Y) CT113_09485 PF00282 Pyridoxal-dependent decarboxylase conserved domain CT113_09490 PF13520 Amino acid permease CT113_09495 PF03553 Na+/H+ antiporter family CT113_09500 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CT113_09500 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CT113_09505 PF13520 Amino acid permease CT113_09510 PF04371 Porphyromonas-type peptidyl-arginine deiminase CT113_09515 PF00696 Amino acid kinase family CT113_09520 PF04371 Porphyromonas-type peptidyl-arginine deiminase CT113_09530 PF00083 Sugar (and other) transporter CT113_09540 PF03466 LysR substrate binding domain CT113_09540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_09545 PF00390 Malic enzyme, N-terminal domain CT113_09545 PF03949 Malic enzyme, NAD binding domain CT113_09560 PF07690 Major Facilitator Superfamily CT113_09570 PF02687 FtsX-like permease family CT113_09575 PF00005 ABC transporter CT113_09580 PF00083 Sugar (and other) transporter CT113_09585 PF01161 Phosphatidylethanolamine-binding protein CT113_09605 PF00465 Iron-containing alcohol dehydrogenase CT113_09615 PF00027 Cyclic nucleotide-binding domain CT113_09620 PF01156 Inosine-uridine preferring nucleoside hydrolase CT113_09630 PF01638 HxlR-like helix-turn-helix CT113_09640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CT113_09690 PF08240 Alcohol dehydrogenase GroES-like domain CT113_09690 PF00107 Zinc-binding dehydrogenase CT113_09695 PF00128 Alpha amylase, catalytic domain CT113_09705 PF00356 Bacterial regulatory proteins, lacI family CT113_09720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_09730 PF01867 CRISPR associated protein Cas1 CT113_09735 PF09827 CRISPR associated protein Cas2 CT113_09750 PF07859 alpha/beta hydrolase fold CT113_09755 PF03633 Glycosyl hydrolase family 65, C-terminal domain CT113_09755 PF03632 Glycosyl hydrolase family 65 central catalytic domain CT113_09755 PF03636 Glycosyl hydrolase family 65, N-terminal domain CT113_09770 PF00893 Small Multidrug Resistance protein CT113_09775 PF00893 Small Multidrug Resistance protein CT113_09780 PF00465 Iron-containing alcohol dehydrogenase CT113_09790 PF00480 ROK family CT113_09795 PF00107 Zinc-binding dehydrogenase CT113_09795 PF08240 Alcohol dehydrogenase GroES-like domain CT113_09815 PF01638 HxlR-like helix-turn-helix CT113_09825 PF01098 Cell cycle protein CT113_09835 PF00005 ABC transporter CT113_09840 PF03816 Cell envelope-related transcriptional attenuator domain CT113_09850 PF08543 Phosphomethylpyrimidine kinase CT113_09860 PF04260 Protein of unknown function (DUF436) CT113_09870 PF00356 Bacterial regulatory proteins, lacI family CT113_09880 PF00294 pfkB family carbohydrate kinase CT113_09885 PF00294 pfkB family carbohydrate kinase CT113_09890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CT113_09900 PF00465 Iron-containing alcohol dehydrogenase CT113_09905 PF01773 Na+ dependent nucleoside transporter N-terminus CT113_09905 PF07662 Na+ dependent nucleoside transporter C-terminus CT113_09915 PF01156 Inosine-uridine preferring nucleoside hydrolase CT113_09930 PF02872 5'-nucleotidase, C-terminal domain CT113_09930 PF00149 Calcineurin-like phosphoesterase CT113_09935 PF00999 Sodium/hydrogen exchanger family CT113_09940 PF03960 ArsC family CT113_09950 PF02558 Ketopantoate reductase PanE/ApbA CT113_09950 PF08546 Ketopantoate reductase PanE/ApbA C terminal CT113_09955 PF07676 WD40-like Beta Propeller Repeat CT113_09955 PF00326 Prolyl oligopeptidase family CT113_09960 PF01381 Helix-turn-helix CT113_09965 PF01943 Polysaccharide biosynthesis protein CT113_09965 PF14667 Polysaccharide biosynthesis C-terminal domain CT113_09970 PF00877 NlpC/P60 family CT113_09970 PF01476 LysM domain CT113_09970 PF08239 Bacterial SH3 domain CT113_09975 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CT113_09990 PF07690 Major Facilitator Superfamily CT113_10000 PF03853 YjeF-related protein N-terminus CT113_10020 PF14659 Phage integrase, N-terminal SAM-like domain CT113_10020 PF00589 Phage integrase family CT113_10180 PF13936 Helix-turn-helix domain CT113_10195 PF00862 Sucrose synthase CT113_10195 PF00534 Glycosyl transferases group 1 CT113_10200 PF00746 LPXTG cell wall anchor motif CT113_10210 PF02796 Helix-turn-helix domain of resolvase CT113_10210 PF00239 Resolvase, N terminal domain CT113_10240 PF13520 Amino acid permease CT113_10245 PF00480 ROK family CT113_10250 PF05525 Branched-chain amino acid transport protein CT113_10265 PF01381 Helix-turn-helix CT113_10285 PF00013 KH domain CT113_10285 PF12072 Domain of unknown function (DUF3552) CT113_10285 PF01966 HD domain CT113_10290 PF12002 MgsA AAA+ ATPase C terminal CT113_10290 PF16193 AAA C-terminal domain CT113_10290 PF00004 ATPase family associated with various cellular activities (AAA) CT113_10295 PF00248 Aldo/keto reductase family CT113_10300 PF00480 ROK family CT113_10320 PF13411 MerR HTH family regulatory protein CT113_10325 PF01381 Helix-turn-helix CT113_10360 PF05958 tRNA (Uracil-5-)-methyltransferase CT113_10360 PF01938 TRAM domain CT113_10365 PF00005 ABC transporter CT113_10370 PF03649 Uncharacterised protein family (UPF0014) CT113_10375 PF00106 short chain dehydrogenase CT113_10380 PF02110 Hydroxyethylthiazole kinase family CT113_10385 PF08543 Phosphomethylpyrimidine kinase CT113_10390 PF02581 Thiamine monophosphate synthase CT113_10395 PF02687 FtsX-like permease family CT113_10395 PF12704 MacB-like periplasmic core domain CT113_10395 PF00005 ABC transporter CT113_10405 PF11799 impB/mucB/samB family C-terminal domain CT113_10405 PF11798 IMS family HHH motif CT113_10405 PF00817 impB/mucB/samB family CT113_10440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_10440 PF03466 LysR substrate binding domain CT113_10445 PF00155 Aminotransferase class I and II CT113_10505 PF13460 NAD(P)H-binding CT113_10510 PF01676 Metalloenzyme superfamily CT113_10515 PF07662 Na+ dependent nucleoside transporter C-terminus CT113_10515 PF01773 Na+ dependent nucleoside transporter N-terminus CT113_10520 PF00860 Permease family CT113_10525 PF01156 Inosine-uridine preferring nucleoside hydrolase CT113_10535 PF02527 rRNA small subunit methyltransferase G CT113_10540 PF02195 ParB-like nuclease domain CT113_10540 PF17762 HTH domain found in ParB protein CT113_10545 PF13614 AAA domain CT113_10550 PF17762 HTH domain found in ParB protein CT113_10550 PF02195 ParB-like nuclease domain CT113_10555 PF06107 Bacterial protein of unknown function (DUF951) CT113_10560 PF06071 Protein of unknown function (DUF933) CT113_10560 PF01926 50S ribosome-binding GTPase CT113_10575 PF00571 CBS domain CT113_10575 PF00478 IMP dehydrogenase / GMP reductase domain CT113_10580 PF00486 Transcriptional regulatory protein, C terminal CT113_10580 PF00072 Response regulator receiver domain CT113_10585 PF00512 His Kinase A (phospho-acceptor) domain CT113_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CT113_10590 PF07943 Penicillin-binding protein 5, C-terminal domain CT113_10590 PF00768 D-alanyl-D-alanine carboxypeptidase CT113_10605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_10605 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_10635 PF00480 ROK family CT113_10640 PF01594 AI-2E family transporter CT113_10650 PF00300 Histidine phosphatase superfamily (branch 1) CT113_10655 PF03641 Possible lysine decarboxylase CT113_10660 PF13936 Helix-turn-helix domain CT113_10685 PF13936 Helix-turn-helix domain CT113_10700 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CT113_10700 PF01367 5'-3' exonuclease, C-terminal SAM fold CT113_10700 PF00476 DNA polymerase family A CT113_10770 PF13936 Helix-turn-helix domain CT113_10810 PF07690 Major Facilitator Superfamily CT113_10820 PF13350 Tyrosine phosphatase family CT113_10845 PF01546 Peptidase family M20/M25/M40 CT113_10850 PF03606 C4-dicarboxylate anaerobic carrier CT113_10855 PF08664 YcbB domain CT113_10855 PF00072 Response regulator receiver domain CT113_10860 PF08676 MutL C terminal dimerisation domain CT113_10860 PF01119 DNA mismatch repair protein, C-terminal domain CT113_10865 PF03606 C4-dicarboxylate anaerobic carrier CT113_10875 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CT113_10875 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CT113_10880 PF13520 Amino acid permease CT113_10885 PF00155 Aminotransferase class I and II CT113_10890 PF00696 Amino acid kinase family CT113_10915 PF07690 Major Facilitator Superfamily CT113_10920 PF01336 OB-fold nucleic acid binding domain CT113_10920 PF00152 tRNA synthetases class II (D, K and N) CT113_10930 PF04226 Transglycosylase associated protein CT113_10945 PF03780 Asp23 family, cell envelope-related function CT113_10950 PF03780 Asp23 family, cell envelope-related function CT113_10955 PF01638 HxlR-like helix-turn-helix CT113_10960 PF00106 short chain dehydrogenase CT113_10970 PF00557 Metallopeptidase family M24 CT113_10980 PF07690 Major Facilitator Superfamily CT113_10990 PF00255 Glutathione peroxidase CT113_11000 PF00392 Bacterial regulatory proteins, gntR family CT113_11005 PF00005 ABC transporter CT113_11025 PF01047 MarR family CT113_11030 PF00664 ABC transporter transmembrane region CT113_11030 PF00005 ABC transporter CT113_11035 PF01470 Pyroglutamyl peptidase CT113_11040 PF00230 Major intrinsic protein CT113_11055 PF01327 Polypeptide deformylase CT113_11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_11060 PF03466 LysR substrate binding domain CT113_11065 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CT113_11070 PF02441 Flavoprotein CT113_11085 PF00005 ABC transporter CT113_11105 PF10114 Sensory domain found in PocR CT113_11105 PF12833 Helix-turn-helix domain CT113_11110 PF03319 Ethanolamine utilisation protein EutN/carboxysome CT113_11115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CT113_11120 PF07690 Major Facilitator Superfamily CT113_11125 PF07690 Major Facilitator Superfamily CT113_11130 PF00248 Aldo/keto reductase family CT113_11145 PF13305 Tetracyclin repressor-like, C-terminal domain CT113_11145 PF00440 Bacterial regulatory proteins, tetR family CT113_11150 PF13411 MerR HTH family regulatory protein CT113_11160 PF02627 Carboxymuconolactone decarboxylase family CT113_11165 PF01270 Glycosyl hydrolases family 8 CT113_11170 PF01183 Glycosyl hydrolases family 25 CT113_11180 PF03352 Methyladenine glycosylase CT113_11185 PF00149 Calcineurin-like phosphoesterase CT113_11190 PF13476 AAA domain CT113_11195 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family CT113_11200 PF01915 Glycosyl hydrolase family 3 C-terminal domain CT113_11200 PF14310 Fibronectin type III-like domain CT113_11200 PF00933 Glycosyl hydrolase family 3 N terminal domain CT113_11205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_11215 PF03180 NLPA lipoprotein CT113_11220 PF00005 ABC transporter CT113_11220 PF09383 NIL domain CT113_11225 PF00528 Binding-protein-dependent transport system inner membrane component CT113_11230 PF00892 EamA-like transporter family CT113_11240 PF00248 Aldo/keto reductase family CT113_11245 PF01597 Glycine cleavage H-protein CT113_11250 PF03099 Biotin/lipoate A/B protein ligase family CT113_11250 PF10437 Bacterial lipoate protein ligase C-terminus CT113_11265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_11270 PF00730 HhH-GPD superfamily base excision DNA repair protein CT113_11270 PF14815 NUDIX domain CT113_11270 PF00633 Helix-hairpin-helix motif CT113_11280 PF01738 Dienelactone hydrolase family CT113_11285 PF00313 'Cold-shock' DNA-binding domain CT113_11305 PF02525 Flavodoxin-like fold CT113_11315 PF08543 Phosphomethylpyrimidine kinase CT113_11325 PF07969 Amidohydrolase family CT113_11335 PF00075 RNase H CT113_11345 PF14602 Hexapeptide repeat of succinyl-transferase CT113_11345 PF12464 Maltose acetyltransferase CT113_11350 PF02028 BCCT, betaine/carnitine/choline family transporter CT113_11360 PF13419 Haloacid dehalogenase-like hydrolase CT113_11365 PF04343 Protein of unknown function, DUF488 CT113_11370 PF02245 Methylpurine-DNA glycosylase (MPG) CT113_11380 PF01209 ubiE/COQ5 methyltransferase family CT113_11385 PF00557 Metallopeptidase family M24 CT113_11390 PF07690 Major Facilitator Superfamily CT113_11405 PF08501 Shikimate dehydrogenase substrate binding domain CT113_11405 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CT113_11415 PF03466 LysR substrate binding domain CT113_11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CT113_11440 PF01022 Bacterial regulatory protein, arsR family CT113_11445 PF08240 Alcohol dehydrogenase GroES-like domain CT113_11445 PF00107 Zinc-binding dehydrogenase CT113_11450 PF13237 4Fe-4S dicluster domain CT113_11450 PF00766 Electron transfer flavoprotein FAD-binding domain CT113_11450 PF01012 Electron transfer flavoprotein domain CT113_11455 PF01012 Electron transfer flavoprotein domain CT113_11460 PF02770 Acyl-CoA dehydrogenase, middle domain CT113_11460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CT113_11460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CT113_11465 PF01263 Aldose 1-epimerase CT113_11470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CT113_11470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CT113_11470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CT113_11470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CT113_11480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CT113_11485 PF10509 Galactokinase galactose-binding signature CT113_11485 PF00288 GHMP kinases N terminal domain CT113_11485 PF08544 GHMP kinases C terminal CT113_11490 PF16363 GDP-mannose 4,6 dehydratase CT113_11495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CT113_11495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CT113_11500 PF00356 Bacterial regulatory proteins, lacI family CT113_11515 PF17975 Ribonucleotide reductase alpha domain CT113_11525 PF00005 ABC transporter CT113_11535 PF01923 Cobalamin adenosyltransferase CT113_11540 PF01431 Peptidase family M13 CT113_11540 PF05649 Peptidase family M13 CT113_11545 PF01047 MarR family CT113_11560 PF00582 Universal stress protein family CT113_11580 PF01510 N-acetylmuramoyl-L-alanine amidase CT113_11580 PF13457 GW (Gly-Tryp) dipeptide domain CT113_11585 PF01475 Ferric uptake regulator family CT113_11600 PF13520 Amino acid permease CT113_11610 PF10282 Lactonase, 7-bladed beta-propeller CT113_11645 PF12849 PBP superfamily domain CT113_11650 PF00528 Binding-protein-dependent transport system inner membrane component CT113_11655 PF00528 Binding-protein-dependent transport system inner membrane component CT113_11660 PF00005 ABC transporter CT113_11665 PF13416 Bacterial extracellular solute-binding protein CT113_11675 PF00528 Binding-protein-dependent transport system inner membrane component CT113_11680 PF00005 ABC transporter CT113_11680 PF08402 TOBE domain CT113_11710 PF03824 High-affinity nickel-transport protein CT113_11715 PF00230 Major intrinsic protein CT113_11720 PF02540 NAD synthase CT113_11725 PF01969 Protein of unknown function DUF111 CT113_11730 PF00731 AIR carboxylase CT113_11735 PF09861 Lactate racemase N-terminal domain CT113_11740 PF13545 Crp-like helix-turn-helix domain CT113_11745 PF00282 Pyridoxal-dependent decarboxylase conserved domain CT113_11760 PF00248 Aldo/keto reductase family CT113_11765 PF02645 Uncharacterised protein, DegV family COG1307 CT113_11785 PF13732 Domain of unknown function (DUF4162) CT113_11785 PF00005 ABC transporter CT113_11790 PF00860 Permease family CT113_11795 PF00710 Asparaginase, N-terminal CT113_11795 PF17763 Glutaminase/Asparaginase C-terminal domain CT113_11825 PF03070 TENA/THI-4/PQQC family CT113_11835 PF00005 ABC transporter CT113_11845 PF07943 Penicillin-binding protein 5, C-terminal domain CT113_11845 PF00768 D-alanyl-D-alanine carboxypeptidase CT113_11850 PF00768 D-alanyl-D-alanine carboxypeptidase CT113_11850 PF07943 Penicillin-binding protein 5, C-terminal domain CT113_11855 PF00302 Chloramphenicol acetyltransferase CT113_11875 PF02378 Phosphotransferase system, EIIC CT113_11900 PF01156 Inosine-uridine preferring nucleoside hydrolase CT113_11915 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_11920 PF00884 Sulfatase CT113_11925 PF00300 Histidine phosphatase superfamily (branch 1) CT113_11935 PF00877 NlpC/P60 family CT113_11935 PF08239 Bacterial SH3 domain CT113_11935 PF01476 LysM domain CT113_11940 PF13411 MerR HTH family regulatory protein CT113_11950 PF07690 Major Facilitator Superfamily CT113_11980 PF13457 GW (Gly-Tryp) dipeptide domain CT113_11980 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CT113_11985 PF00144 Beta-lactamase CT113_11990 PF03741 Integral membrane protein TerC family CT113_11995 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CT113_11995 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CT113_12030 PF00005 ABC transporter CT113_12030 PF08402 TOBE domain CT113_12035 PF02653 Branched-chain amino acid transport system / permease component CT113_12045 PF02645 Uncharacterised protein, DegV family COG1307 CT113_12055 PF02653 Branched-chain amino acid transport system / permease component CT113_12060 PF09383 NIL domain CT113_12060 PF00005 ABC transporter CT113_12070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CT113_12075 PF00005 ABC transporter CT113_12075 PF12848 ABC transporter CT113_12080 PF03734 L,D-transpeptidase catalytic domain CT113_12085 PF00561 alpha/beta hydrolase fold CT113_12090 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CT113_12090 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CT113_12090 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal CT113_12095 PF13520 Amino acid permease CT113_12100 PF13344 Haloacid dehalogenase-like hydrolase CT113_12100 PF00293 NUDIX domain CT113_12105 PF00625 Guanylate kinase CT113_12110 PF01475 Ferric uptake regulator family CT113_12125 PF00005 ABC transporter CT113_12130 PF00497 Bacterial extracellular solute-binding proteins, family 3 CT113_12135 PF00528 Binding-protein-dependent transport system inner membrane component CT113_12140 PF00528 Binding-protein-dependent transport system inner membrane component CT113_12145 PF16360 GTP-binding GTPase Middle Region CT113_12145 PF13167 GTP-binding GTPase N-terminal CT113_12145 PF01926 50S ribosome-binding GTPase CT113_12150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_12155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CT113_12160 PF00528 Binding-protein-dependent transport system inner membrane component CT113_12165 PF12911 N-terminal TM domain of oligopeptide transport permease C CT113_12165 PF00528 Binding-protein-dependent transport system inner membrane component CT113_12170 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT113_12170 PF00005 ABC transporter CT113_12175 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CT113_12175 PF00005 ABC transporter CT113_12180 PF00300 Histidine phosphatase superfamily (branch 1) CT113_12185 PF02254 TrkA-N domain CT113_12185 PF00999 Sodium/hydrogen exchanger family CT113_12185 PF02080 TrkA-C domain CT113_12190 PF13538 UvrD-like helicase C-terminal domain CT113_12195 PF00485 Phosphoribulokinase / Uridine kinase family CT113_12205 PF02540 NAD synthase CT113_12205 PF00117 Glutamine amidotransferase class-I CT113_12205 PF00958 GMP synthase C terminal domain CT113_12210 PF02899 Phage integrase, N-terminal SAM-like domain CT113_12210 PF00589 Phage integrase family CT113_12235 PF01381 Helix-turn-helix CT113_12275 PF03837 RecT family CT113_12305 PF05866 Endodeoxyribonuclease RusA CT113_12445 PF01476 LysM domain CT113_12445 PF08239 Bacterial SH3 domain CT113_12445 PF00877 NlpC/P60 family CT113_12520 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CT113_12545 PF13936 Helix-turn-helix domain CT113_12555 PF16874 Glycosyl hydrolase family 36 C-terminal domain CT113_12555 PF16875 Glycosyl hydrolase family 36 N-terminal domain CT113_12565 PF01433 Peptidase family M1 domain CT113_12565 PF11838 ERAP1-like C-terminal domain CT113_12570 PF13520 Amino acid permease CT113_12575 PF03577 Peptidase family C69 CT113_12590 PF00270 DEAD/DEAH box helicase CT113_12590 PF00271 Helicase conserved C-terminal domain CT113_12590 PF09382 RQC domain CT113_12590 PF16124 RecQ zinc-binding CT113_12590 PF00570 HRDC domain CT113_12595 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CT113_12600 PF01306 LacY proton/sugar symporter CT113_12605 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CT113_12605 PF04616 Glycosyl hydrolases family 43 CT113_12615 PF00392 Bacterial regulatory proteins, gntR family CT113_12620 PF13936 Helix-turn-helix domain CT113_12630 PF13936 Helix-turn-helix domain CT113_12645 PF07944 Beta-L-arabinofuranosidase, GH127 CT113_12660 PF01497 Periplasmic binding protein CT113_12660 PF12833 Helix-turn-helix domain CT113_12675 PF00596 Class II Aldolase and Adducin N-terminal domain CT113_12680 PF02610 L-arabinose isomerase CT113_12680 PF11762 L-arabinose isomerase C-terminal domain CT113_12685 PF12464 Maltose acetyltransferase CT113_12685 PF14602 Hexapeptide repeat of succinyl-transferase CT113_12700 PF00849 RNA pseudouridylate synthase CT113_12720 PF00583 Acetyltransferase (GNAT) family CT113_12745 PF03591 AzlC protein CT113_12760 PF07690 Major Facilitator Superfamily CT113_12775 PF01545 Cation efflux family CT113_12775 PF16916 Dimerisation domain of Zinc Transporter CT113_12810 PF00324 Amino acid permease CT113_12815 PF01712 Deoxynucleoside kinase CT113_12820 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CT113_12820 PF02403 Seryl-tRNA synthetase N-terminal domain CT113_12865 PF05848 CtsR N-terminal HTH domain CT113_12865 PF17727 CtsR C-terminal dimerization domain CT113_12870 PF10431 C-terminal, D2-small domain, of ClpB protein CT113_12870 PF07724 AAA domain (Cdc48 subfamily) CT113_12870 PF00004 ATPase family associated with various cellular activities (AAA) CT113_12870 PF17871 AAA lid domain CT113_12870 PF02861 Clp amino terminal domain, pathogenicity island component CT113_12875 PF00440 Bacterial regulatory proteins, tetR family CT113_12875 PF08360 QacR-like protein, C-terminal region CT113_12880 PF00562 RNA polymerase Rpb2, domain 6 CT113_12880 PF04565 RNA polymerase Rpb2, domain 3 CT113_12880 PF04560 RNA polymerase Rpb2, domain 7 CT113_12880 PF10385 RNA polymerase beta subunit external 1 domain CT113_12880 PF04563 RNA polymerase beta subunit CT113_12880 PF04561 RNA polymerase Rpb2, domain 2 CT113_12885 PF04998 RNA polymerase Rpb1, domain 5 CT113_12885 PF00623 RNA polymerase Rpb1, domain 2 CT113_12885 PF04997 RNA polymerase Rpb1, domain 1 CT113_12885 PF05000 RNA polymerase Rpb1, domain 4 CT113_12885 PF04983 RNA polymerase Rpb1, domain 3 CT113_12895 PF00164 Ribosomal protein S12/S23 CT113_12900 PF00177 Ribosomal protein S7p/S5e CT113_12905 PF00679 Elongation factor G C-terminus CT113_12905 PF14492 Elongation Factor G, domain II CT113_12905 PF03764 Elongation factor G, domain IV CT113_12905 PF03144 Elongation factor Tu domain 2 CT113_12905 PF00009 Elongation factor Tu GTP binding domain CT113_12910 PF01554 MatE CT113_12915 PF00338 Ribosomal protein S10p/S20e CT113_12920 PF00297 Ribosomal protein L3 CT113_12925 PF00573 Ribosomal protein L4/L1 family CT113_12930 PF00276 Ribosomal protein L23 CT113_12935 PF00181 Ribosomal Proteins L2, RNA binding domain CT113_12935 PF03947 Ribosomal Proteins L2, C-terminal domain CT113_12940 PF00203 Ribosomal protein S19 CT113_12945 PF00237 Ribosomal protein L22p/L17e CT113_12950 PF07650 KH domain CT113_12950 PF00189 Ribosomal protein S3, C-terminal domain CT113_12955 PF00252 Ribosomal protein L16p/L10e CT113_12960 PF00831 Ribosomal L29 protein CT113_12965 PF00366 Ribosomal protein S17 CT113_12970 PF00238 Ribosomal protein L14p/L23e CT113_12975 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CT113_12975 PF00467 KOW motif CT113_12980 PF00673 ribosomal L5P family C-terminus CT113_12980 PF00281 Ribosomal protein L5 CT113_12985 PF00253 Ribosomal protein S14p/S29e CT113_12990 PF00410 Ribosomal protein S8 CT113_12995 PF00347 Ribosomal protein L6 CT113_13000 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CT113_13005 PF03719 Ribosomal protein S5, C-terminal domain CT113_13005 PF00333 Ribosomal protein S5, N-terminal domain CT113_13010 PF00327 Ribosomal protein L30p/L7e CT113_13015 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CT113_13020 PF00344 SecY translocase CT113_13025 PF05191 Adenylate kinase, active site lid CT113_13030 PF01176 Translation initiation factor 1A / IF-1 CT113_13035 PF00444 Ribosomal protein L36 CT113_13040 PF00416 Ribosomal protein S13/S18 CT113_13045 PF00411 Ribosomal protein S11 CT113_13050 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CT113_13050 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CT113_13050 PF01000 RNA polymerase Rpb3/RpoA insert domain CT113_13055 PF01196 Ribosomal protein L17 CT113_13060 PF00005 ABC transporter CT113_13065 PF00005 ABC transporter CT113_13070 PF02361 Cobalt transport protein CT113_13075 PF01416 tRNA pseudouridine synthase CT113_13080 PF00572 Ribosomal protein L13 CT113_13085 PF00380 Ribosomal protein S9/S16 CT113_13090 PF01238 Phosphomannose isomerase type I CT113_13095 PF02386 Cation transport protein CT113_13100 PF02080 TrkA-C domain CT113_13100 PF02254 TrkA-N domain CT113_13105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CT113_13105 PF01872 RibD C-terminal domain CT113_13110 PF00677 Lumazine binding domain CT113_13115 PF00925 GTP cyclohydrolase II CT113_13115 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CT113_13120 PF00885 6,7-dimethyl-8-ribityllumazine synthase CT113_13125 PF03590 Aspartate-ammonia ligase CT113_13130 PF13520 Amino acid permease CT113_13135 PF10437 Bacterial lipoate protein ligase C-terminus CT113_13135 PF03099 Biotin/lipoate A/B protein ligase family CT113_13140 PF03816 Cell envelope-related transcriptional attenuator domain CT113_13145 PF02706 Chain length determinant protein CT113_13150 PF13614 AAA domain CT113_13160 PF00483 Nucleotidyl transferase CT113_13165 PF01370 NAD dependent epimerase/dehydratase family CT113_13170 PF02397 Bacterial sugar transferase CT113_13175 PF00535 Glycosyl transferase family 2 CT113_13180 PF01501 Glycosyl transferase family 8 CT113_13180 PF08759 Glycosyltransferase GT-D fold CT113_13185 PF00535 Glycosyl transferase family 2 CT113_13185 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CT113_13210 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CT113_13215 PF16363 GDP-mannose 4,6 dehydratase CT113_13220 PF04321 RmlD substrate binding domain CT113_13225 PF03816 Cell envelope-related transcriptional attenuator domain CT113_13235 PF13350 Tyrosine phosphatase family CT113_13240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT113_13240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT113_13245 PF01654 Cytochrome bd terminal oxidase subunit I CT113_13250 PF02322 Cytochrome bd terminal oxidase subunit II CT113_13255 PF00664 ABC transporter transmembrane region CT113_13255 PF00005 ABC transporter CT113_13260 PF00005 ABC transporter CT113_13260 PF00664 ABC transporter transmembrane region CT113_13270 PF00348 Polyprenyl synthetase CT113_13280 PF00156 Phosphoribosyl transferase domain CT113_13285 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CT113_13285 PF02222 ATP-grasp domain CT113_13290 PF00580 UvrD/REP helicase N-terminal domain CT113_13290 PF13361 UvrD-like helicase C-terminal domain CT113_13295 PF00533 BRCA1 C Terminus (BRCT) domain CT113_13295 PF01653 NAD-dependent DNA ligase adenylation domain CT113_13295 PF03120 NAD-dependent DNA ligase OB-fold domain CT113_13295 PF12826 Helix-hairpin-helix motif CT113_13295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CT113_13300 PF07537 CamS sex pheromone cAM373 precursor CT113_13305 PF02686 Glu-tRNAGln amidotransferase C subunit CT113_13310 PF01425 Amidase CT113_13315 PF02934 GatB/GatE catalytic domain CT113_13315 PF02637 GatB domain CT113_13320 PF00781 Diacylglycerol kinase catalytic domain CT113_13325 PF01938 TRAM domain CT113_13325 PF05958 tRNA (Uracil-5-)-methyltransferase CT113_13330 PF10662 Ethanolamine utilisation - propanediol utilisation CT113_13335 PF00230 Major intrinsic protein CT113_13340 PF12833 Helix-turn-helix domain CT113_13340 PF10114 Sensory domain found in PocR CT113_13345 PF00936 BMC domain CT113_13350 PF00936 BMC domain CT113_13355 PF02286 Dehydratase large subunit CT113_13360 PF02288 Dehydratase medium subunit CT113_13365 PF02287 Dehydratase small subunit CT113_13370 PF08841 Diol dehydratase reactivase ATPase-like domain CT113_13370 PF18427 DD-reactivating factor swiveling domain CT113_13385 PF00936 BMC domain CT113_13390 PF06130 Phosphate propanoyltransferase CT113_13400 PF03319 Ethanolamine utilisation protein EutN/carboxysome CT113_13405 PF01923 Cobalamin adenosyltransferase CT113_13410 PF03928 Haem-degrading CT113_13415 PF00171 Aldehyde dehydrogenase family CT113_13420 PF00465 Iron-containing alcohol dehydrogenase CT113_13425 PF00871 Acetokinase family CT113_13430 PF00936 BMC domain CT113_13435 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CT113_13440 PF13350 Tyrosine phosphatase family CT113_13455 PF01791 DeoC/LacD family aldolase CT113_13460 PF01676 Metalloenzyme superfamily CT113_13465 PF01048 Phosphorylase superfamily CT113_13470 PF04198 Putative sugar-binding domain CT113_13475 PF00591 Glycosyl transferase family, a/b domain CT113_13475 PF02885 Glycosyl transferase family, helical bundle domain CT113_13475 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CT113_13480 PF02655 ATP-grasp domain CT113_13480 PF18419 ATP-grasp-like domain CT113_13480 PF04262 Glutamate-cysteine ligase CT113_13485 PF05025 RbsD / FucU transport protein family CT113_13490 PF07690 Major Facilitator Superfamily CT113_13500 PF02447 GntP family permease CT113_13505 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CT113_13505 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CT113_13510 PF01380 SIS domain CT113_13510 PF01418 Helix-turn-helix domain, rpiR family CT113_13530 PF00270 DEAD/DEAH box helicase CT113_13530 PF00271 Helicase conserved C-terminal domain CT113_13550 PF02447 GntP family permease CT113_13555 PF00535 Glycosyl transferase family 2 CT113_13560 PF02350 UDP-N-acetylglucosamine 2-epimerase CT113_13570 PF03631 Virulence factor BrkB CT113_13580 PF02631 RecX family CT113_13585 PF00144 Beta-lactamase CT113_13595 PF04167 Protein of unknown function (DUF402) CT113_13600 PF01594 AI-2E family transporter CT113_13605 PF01467 Cytidylyltransferase-like CT113_13615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CT113_13625 PF16658 Class II release factor RF3, C-terminal domain CT113_13625 PF00009 Elongation factor Tu GTP binding domain CT113_13625 PF03144 Elongation factor Tu domain 2 CT113_13635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CT113_13635 PF07992 Pyridine nucleotide-disulphide oxidoreductase CT113_13640 PF03577 Peptidase family C69 CT113_13645 PF00690 Cation transporter/ATPase, N-terminus CT113_13645 PF00689 Cation transporting ATPase, C-terminus CT113_13655 PF00004 ATPase family associated with various cellular activities (AAA) CT113_13655 PF07724 AAA domain (Cdc48 subfamily) CT113_13655 PF17871 AAA lid domain CT113_13655 PF10431 C-terminal, D2-small domain, of ClpB protein CT113_13665 PF00381 PTS HPr component phosphorylation site CT113_13670 PF02896 PEP-utilising enzyme, TIM barrel domain CT113_13670 PF00391 PEP-utilising enzyme, mobile domain CT113_13670 PF05524 PEP-utilising enzyme, N-terminal CT113_13675 PF13439 Glycosyltransferase Family 4 CT113_13675 PF00534 Glycosyl transferases group 1 CT113_13680 PF13439 Glycosyltransferase Family 4 CT113_13680 PF00534 Glycosyl transferases group 1 CT113_13695 PF00884 Sulfatase CT113_13790 PF01906 Putative heavy-metal-binding CT113_13810 PF02772 S-adenosylmethionine synthetase, central domain CT113_13810 PF02773 S-adenosylmethionine synthetase, C-terminal domain CT113_13810 PF00438 S-adenosylmethionine synthetase, N-terminal domain CT113_13815 PF07690 Major Facilitator Superfamily CT113_13825 PF01712 Deoxynucleoside kinase CT113_13835 PF13419 Haloacid dehalogenase-like hydrolase CT113_13840 PF03636 Glycosyl hydrolase family 65, N-terminal domain CT113_13840 PF03632 Glycosyl hydrolase family 65 central catalytic domain CT113_13840 PF03633 Glycosyl hydrolase family 65, C-terminal domain CT113_13845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CT113_13845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CT113_13860 PF01047 MarR family CT113_13885 PF01906 Putative heavy-metal-binding CT113_13900 PF01741 Large-conductance mechanosensitive channel, MscL CT113_13935 PF01381 Helix-turn-helix CT113_13985 PF00436 Single-strand binding protein family CT113_14075 PF00574 Clp protease CT113_14120 PF01464 Transglycosylase SLT domain