locus-tag class description LG3211_0001 PF08299 Bacterial dnaA protein helix-turn-helix LG3211_0001 PF00308 Bacterial dnaA protein LG3211_0001 PF11638 DnaA N-terminal domain LG3211_0002 PF00712 DNA polymerase III beta subunit, N-terminal domain LG3211_0002 PF02767 DNA polymerase III beta subunit, central domain LG3211_0002 PF02768 DNA polymerase III beta subunit, C-terminal domain LG3211_0003 PF02463 RecF/RecN/SMC N terminal domain LG3211_0004 PF00986 DNA gyrase B subunit, carboxyl terminus LG3211_0004 PF18053 DNA gyrase B subunit insert domain LG3211_0004 PF00204 DNA gyrase B LG3211_0004 PF01751 Toprim domain LG3211_0004 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0006 PF01435 Peptidase family M48 LG3211_0008 PF03544 Gram-negative bacterial TonB protein C-terminal LG3211_0009 PF01618 MotA/TolQ/ExbB proton channel family LG3211_0010 PF02472 Biopolymer transport protein ExbD/TolR LG3211_0011 PF02472 Biopolymer transport protein ExbD/TolR LG3211_0012 PF02472 Biopolymer transport protein ExbD/TolR LG3211_0013 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LG3211_0015 PF13091 PLD-like domain LG3211_0015 PF13396 Phospholipase_D-nuclease N-terminal LG3211_0018 PF04055 Radical SAM superfamily LG3211_0020 PF07690 Major Facilitator Superfamily LG3211_0021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0021 PF03466 LysR substrate binding domain LG3211_0022 PF01965 DJ-1/PfpI family LG3211_0022 PF12833 Helix-turn-helix domain LG3211_0023 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_0023 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_0023 PF01483 Proprotein convertase P-domain LG3211_0023 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_0025 PF03600 Citrate transporter LG3211_0025 PF02080 TrkA-C domain LG3211_0026 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0027 PF00072 Response regulator receiver domain LG3211_0037 PF00158 Sigma-54 interaction domain LG3211_0037 PF00072 Response regulator receiver domain LG3211_0037 PF02954 Bacterial regulatory protein, Fis family LG3211_0040 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LG3211_0043 PF00817 impB/mucB/samB family LG3211_0043 PF11799 impB/mucB/samB family C-terminal domain LG3211_0043 PF11798 IMS family HHH motif LG3211_0046 PF00072 Response regulator receiver domain LG3211_0046 PF00486 Transcriptional regulatory protein, C terminal LG3211_0047 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0047 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0047 PF08521 Two-component sensor kinase N-terminal LG3211_0051 PF04542 Sigma-70 region 2 LG3211_0051 PF08281 Sigma-70, region 4 LG3211_0051 PF12680 SnoaL-like domain LG3211_0052 PF02627 Carboxymuconolactone decarboxylase family LG3211_0053 PF00072 Response regulator receiver domain LG3211_0053 PF00196 Bacterial regulatory proteins, luxR family LG3211_0054 PF07730 Histidine kinase LG3211_0066 PF00351 Biopterin-dependent aromatic amino acid hydroxylase LG3211_0068 PF01037 Lrp/AsnC ligand binding domain LG3211_0069 PF01177 Asp/Glu/Hydantoin racemase LG3211_0078 PF17785 PUA-like domain LG3211_0078 PF10672 S-adenosylmethionine-dependent methyltransferase LG3211_0082 PF02646 RmuC family LG3211_0084 PF04333 MlaA lipoprotein LG3211_0086 PF05494 MlaC protein LG3211_0087 PF02470 MlaD protein LG3211_0088 PF02405 Permease MlaE LG3211_0089 PF00005 ABC transporter LG3211_0091 PF17946 RecC C-terminal domain LG3211_0092 PF13361 UvrD-like helicase C-terminal domain LG3211_0092 PF00580 UvrD/REP helicase N-terminal domain LG3211_0092 PF12705 PD-(D/E)XK nuclease superfamily LG3211_0093 PF13538 UvrD-like helicase C-terminal domain LG3211_0094 PF03466 LysR substrate binding domain LG3211_0094 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0097 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_0098 PF00873 AcrB/AcrD/AcrF family LG3211_0099 PF02321 Outer membrane efflux protein LG3211_0102 PF00990 Diguanylate cyclase, GGDEF domain LG3211_0102 PF03707 Bacterial signalling protein N terminal repeat LG3211_0102 PF00563 EAL domain LG3211_0104 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_0105 PF12704 MacB-like periplasmic core domain LG3211_0105 PF00005 ABC transporter LG3211_0105 PF02687 FtsX-like permease family LG3211_0109 PF00005 ABC transporter LG3211_0109 PF02687 FtsX-like permease family LG3211_0109 PF12704 MacB-like periplasmic core domain LG3211_0112 PF01134 Glucose inhibited division protein A LG3211_0112 PF13932 GidA associated domain LG3211_0113 PF04349 Periplasmic glucan biosynthesis protein, MdoG LG3211_0116 PF00144 Beta-lactamase LG3211_0120 PF00199 Catalase LG3211_0121 PF04542 Sigma-70 region 2 LG3211_0121 PF08281 Sigma-70, region 4 LG3211_0126 PF00884 Sulfatase LG3211_0126 PF08019 Phosphoethanolamine transferase EptA/EptB LG3211_0127 PF01979 Amidohydrolase family LG3211_0128 PF01979 Amidohydrolase family LG3211_0129 PF01380 SIS domain LG3211_0130 PF00392 Bacterial regulatory proteins, gntR family LG3211_0130 PF07702 UTRA domain LG3211_0131 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LG3211_0131 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LG3211_0132 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LG3211_0133 PF00920 Dehydratase family LG3211_0135 PF13419 Haloacid dehalogenase-like hydrolase LG3211_0136 PF01081 KDPG and KHG aldolase LG3211_0137 PF00356 Bacterial regulatory proteins, lacI family LG3211_0138 PF03061 Thioesterase superfamily LG3211_0142 PF13091 PLD-like domain LG3211_0145 PF07015 VirC1 protein LG3211_0150 PF01434 Peptidase family M41 LG3211_0150 PF17862 AAA+ lid domain LG3211_0150 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_0164 PF12796 Ankyrin repeats (3 copies) LG3211_0165 PF00497 Bacterial extracellular solute-binding proteins, family 3 LG3211_0165 PF00989 PAS fold LG3211_0165 PF01627 Hpt domain LG3211_0165 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0165 PF00072 Response regulator receiver domain LG3211_0166 PF00360 Phytochrome region LG3211_0166 PF00563 EAL domain LG3211_0166 PF01590 GAF domain LG3211_0166 PF00990 Diguanylate cyclase, GGDEF domain LG3211_0169 PF00728 Glycosyl hydrolase family 20, catalytic domain LG3211_0169 PF02838 Glycosyl hydrolase family 20, domain 2 LG3211_0169 PF07691 PA14 domain LG3211_0172 PF02685 Glucokinase LG3211_0175 PF07690 Major Facilitator Superfamily LG3211_0178 PF00440 Bacterial regulatory proteins, tetR family LG3211_0178 PF16925 Tetracyclin repressor-like, C-terminal domain LG3211_0179 PF16884 N-terminal domain of oxidoreductase LG3211_0179 PF00107 Zinc-binding dehydrogenase LG3211_0182 PF01161 Phosphatidylethanolamine-binding protein LG3211_0187 PF02673 Bacitracin resistance protein BacA LG3211_0189 PF00120 Glutamine synthetase, catalytic domain LG3211_0189 PF03951 Glutamine synthetase, beta-Grasp domain LG3211_0190 PF00583 Acetyltransferase (GNAT) family LG3211_0192 PF00543 Nitrogen regulatory protein P-II LG3211_0193 PF00909 Ammonium Transporter Family LG3211_0196 PF00082 Subtilase family LG3211_0196 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_0198 PF07715 TonB-dependent Receptor Plug Domain LG3211_0198 PF00593 TonB dependent receptor LG3211_0200 PF00474 Sodium:solute symporter family LG3211_0201 PF00356 Bacterial regulatory proteins, lacI family LG3211_0203 PF14310 Fibronectin type III-like domain LG3211_0203 PF01915 Glycosyl hydrolase family 3 C-terminal domain LG3211_0203 PF00933 Glycosyl hydrolase family 3 N terminal domain LG3211_0204 PF00072 Response regulator receiver domain LG3211_0206 PF02630 SCO1/SenC LG3211_0209 PF01312 FlhB HrpN YscU SpaS Family LG3211_0210 PF01311 Bacterial export proteins, family 1 LG3211_0211 PF01313 Bacterial export proteins, family 3 LG3211_0212 PF00813 FliP family LG3211_0213 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LG3211_0214 PF00196 Bacterial regulatory proteins, luxR family LG3211_0214 PF00072 Response regulator receiver domain LG3211_0215 PF00989 PAS fold LG3211_0215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0215 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0218 PF00771 FHIPEP family LG3211_0222 PF01514 Secretory protein of YscJ/FliF family LG3211_0225 PF18269 T3SS EscN ATPase C-terminal domain LG3211_0225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LG3211_0225 PF02874 ATP synthase alpha/beta family, beta-barrel domain LG3211_0233 PF01757 Acyltransferase family LG3211_0237 PF13439 Glycosyltransferase Family 4 LG3211_0241 PF07715 TonB-dependent Receptor Plug Domain LG3211_0241 PF00593 TonB dependent receptor LG3211_0243 PF07715 TonB-dependent Receptor Plug Domain LG3211_0243 PF00593 TonB dependent receptor LG3211_0244 PF03795 YCII-related domain LG3211_0245 PF06983 3-demethylubiquinone-9 3-methyltransferase LG3211_0246 PF08281 Sigma-70, region 4 LG3211_0246 PF04542 Sigma-70 region 2 LG3211_0247 PF02308 MgtC family LG3211_0248 PF00005 ABC transporter LG3211_0254 PF00873 AcrB/AcrD/AcrF family LG3211_0257 PF00394 Multicopper oxidase LG3211_0257 PF07732 Multicopper oxidase LG3211_0257 PF07731 Multicopper oxidase LG3211_0258 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LG3211_0258 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_0260 PF00149 Calcineurin-like phosphoesterase LG3211_0264 PF03741 Integral membrane protein TerC family LG3211_0266 PF01112 Asparaginase LG3211_0270 PF07715 TonB-dependent Receptor Plug Domain LG3211_0270 PF00593 TonB dependent receptor LG3211_0282 PF00593 TonB dependent receptor LG3211_0282 PF07660 Secretin and TonB N terminus short domain LG3211_0282 PF07715 TonB-dependent Receptor Plug Domain LG3211_0285 PF16220 Domain of unknown function (DUF4880) LG3211_0285 PF04773 FecR protein LG3211_0286 PF04542 Sigma-70 region 2 LG3211_0286 PF08281 Sigma-70, region 4 LG3211_0289 PF02837 Glycosyl hydrolases family 2, sugar binding domain LG3211_0289 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LG3211_0289 PF16353 Domain of unknown function(DUF4981) LG3211_0289 PF00703 Glycosyl hydrolases family 2 LG3211_0289 PF02929 Beta galactosidase small chain LG3211_0291 PF01081 KDPG and KHG aldolase LG3211_0292 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LG3211_0292 PF13378 Enolase C-terminal domain-like LG3211_0293 PF08450 SMP-30/Gluconolactonase/LRE-like region LG3211_0294 PF05035 2-keto-3-deoxy-galactonokinase LG3211_0295 PF00474 Sodium:solute symporter family LG3211_0296 PF17801 Alpha galactosidase C-terminal beta sandwich domain LG3211_0296 PF16499 Alpha galactosidase A LG3211_0298 PF16875 Glycosyl hydrolase family 36 N-terminal domain LG3211_0298 PF16874 Glycosyl hydrolase family 36 C-terminal domain LG3211_0301 PF00544 Pectate lyase LG3211_0302 PF03211 Pectate lyase LG3211_0303 PF00356 Bacterial regulatory proteins, lacI family LG3211_0305 PF00356 Bacterial regulatory proteins, lacI family LG3211_0308 PF13472 GDSL-like Lipase/Acylhydrolase family LG3211_0309 PF00135 Carboxylesterase family LG3211_0312 PF03358 NADPH-dependent FMN reductase LG3211_0313 PF03960 ArsC family LG3211_0315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0315 PF07694 5TMR of 5TMR-LYT LG3211_0315 PF06580 Histidine kinase LG3211_0316 PF04397 LytTr DNA-binding domain LG3211_0316 PF00072 Response regulator receiver domain LG3211_0320 PF00561 alpha/beta hydrolase fold LG3211_0321 PF00989 PAS fold LG3211_0321 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0322 PF00158 Sigma-54 interaction domain LG3211_0322 PF02954 Bacterial regulatory protein, Fis family LG3211_0322 PF00072 Response regulator receiver domain LG3211_0323 PF00080 Copper/zinc superoxide dismutase (SODC) LG3211_0328 PF02803 Thiolase, C-terminal domain LG3211_0328 PF00108 Thiolase, N-terminal domain LG3211_0329 PF16385 Domain of unknown function LG3211_0329 PF00884 Sulfatase LG3211_0339 PF00581 Rhodanese-like domain LG3211_0340 PF02556 Preprotein translocase subunit SecB LG3211_0341 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LG3211_0341 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LG3211_0344 PF09859 Oxygenase, catalysing oxidative methylation of damaged DNA LG3211_0347 PF07715 TonB-dependent Receptor Plug Domain LG3211_0347 PF00593 TonB dependent receptor LG3211_0348 PF13732 Domain of unknown function (DUF4162) LG3211_0348 PF00005 ABC transporter LG3211_0351 PF07715 TonB-dependent Receptor Plug Domain LG3211_0351 PF00593 TonB dependent receptor LG3211_0353 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_0354 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LG3211_0354 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LG3211_0354 PF02142 MGS-like domain LG3211_0356 PF07690 Major Facilitator Superfamily LG3211_0357 PF03466 LysR substrate binding domain LG3211_0357 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0360 PF00588 SpoU rRNA Methylase family LG3211_0361 PF00675 Insulinase (Peptidase family M16) LG3211_0361 PF05193 Peptidase M16 inactive domain LG3211_0363 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LG3211_0363 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LG3211_0366 PF04012 PspA/IM30 family LG3211_0369 PF17864 RuvB AAA lid domain LG3211_0369 PF05496 Holliday junction DNA helicase RuvB P-loop domain LG3211_0369 PF05491 RuvB C-terminal winged helix domain LG3211_0371 PF02515 CoA-transferase family III LG3211_0373 PF03781 Sulfatase-modifying factor enzyme 1 LG3211_0374 PF00294 pfkB family carbohydrate kinase LG3211_0375 PF00144 Beta-lactamase LG3211_0377 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0377 PF03466 LysR substrate binding domain LG3211_0380 PF00474 Sodium:solute symporter family LG3211_0381 PF03328 HpcH/HpaI aldolase/citrate lyase family LG3211_0383 PF00561 alpha/beta hydrolase fold LG3211_0384 PF00501 AMP-binding enzyme LG3211_0385 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family LG3211_0388 PF03109 ABC1 family LG3211_0389 PF00675 Insulinase (Peptidase family M16) LG3211_0389 PF05193 Peptidase M16 inactive domain LG3211_0390 PF00849 RNA pseudouridylate synthase LG3211_0392 PF00472 RF-1 domain LG3211_0394 PF07729 FCD domain LG3211_0394 PF00392 Bacterial regulatory proteins, gntR family LG3211_0395 PF08453 Peptidase family M9 N-terminal LG3211_0395 PF01752 Collagenase LG3211_0396 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0396 PF03466 LysR substrate binding domain LG3211_0398 PF01274 Malate synthase LG3211_0399 PF00463 Isocitrate lyase family LG3211_0400 PF17151 Periplasmic sensor domain LG3211_0400 PF00990 Diguanylate cyclase, GGDEF domain LG3211_0406 PF03060 Nitronate monooxygenase LG3211_0407 PF00561 alpha/beta hydrolase fold LG3211_0411 PF01078 Magnesium chelatase, subunit ChlI LG3211_0411 PF13335 Magnesium chelatase, subunit ChlI C-terminal LG3211_0417 PF01527 Transposase LG3211_0418 PF13276 HTH-like domain LG3211_0418 PF00665 Integrase core domain LG3211_0418 PF13333 Integrase core domain LG3211_0420 PF02899 Phage integrase, N-terminal SAM-like domain LG3211_0420 PF00589 Phage integrase family LG3211_0421 PF01078 Magnesium chelatase, subunit ChlI LG3211_0421 PF13335 Magnesium chelatase, subunit ChlI C-terminal LG3211_0422 PF04380 Membrane fusogenic activity LG3211_0423 PF00543 Nitrogen regulatory protein P-II LG3211_0424 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0424 PF03466 LysR substrate binding domain LG3211_0425 PF03601 Conserved hypothetical protein 698 LG3211_0427 PF17284 Spermidine synthase tetramerisation domain LG3211_0430 PF17944 Arginine decarboxylase C-terminal helical extension LG3211_0430 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LG3211_0430 PF17810 Arginine decarboxylase helical bundle domain LG3211_0433 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LG3211_0433 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LG3211_0437 PF03485 Arginyl tRNA synthetase N terminal domain LG3211_0437 PF05746 DALR anticodon binding domain LG3211_0437 PF00750 tRNA synthetases class I (R) LG3211_0438 PF04002 RadC-like JAB domain LG3211_0439 PF02441 Flavoprotein LG3211_0439 PF04127 DNA / pantothenate metabolism flavoprotein LG3211_0440 PF02441 Flavoprotein LG3211_0440 PF04127 DNA / pantothenate metabolism flavoprotein LG3211_0442 PF00692 dUTPase LG3211_0444 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LG3211_0444 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LG3211_0444 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LG3211_0444 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LG3211_0446 PF00156 Phosphoribosyl transferase domain LG3211_0448 PF03372 Endonuclease/Exonuclease/phosphatase family LG3211_0449 PF07690 Major Facilitator Superfamily LG3211_0451 PF03702 Anhydro-N-acetylmuramic acid kinase LG3211_0452 PF04225 Opacity-associated protein A LysM-like domain LG3211_0452 PF01551 Peptidase family M23 LG3211_0453 PF00579 tRNA synthetases class I (W and Y) LG3211_0461 PF04389 Peptidase family M28 LG3211_0464 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LG3211_0464 PF01676 Metalloenzyme superfamily LG3211_0465 PF01551 Peptidase family M23 LG3211_0466 PF13180 PDZ domain LG3211_0466 PF03572 Peptidase family S41 LG3211_0469 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) LG3211_0470 PF03473 MOSC domain LG3211_0470 PF03475 3-alpha domain LG3211_0477 PF00171 Aldehyde dehydrogenase family LG3211_0477 PF14850 DNA-binding domain of Proline dehydrogenase LG3211_0477 PF01619 Proline dehydrogenase LG3211_0477 PF18327 Proline utilization A proline dehydrogenase N-terminal domain LG3211_0479 PF02790 Cytochrome C oxidase subunit II, transmembrane domain LG3211_0479 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LG3211_0480 PF00115 Cytochrome C and Quinol oxidase polypeptide I LG3211_0482 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 LG3211_0483 PF00510 Cytochrome c oxidase subunit III LG3211_0486 PF02628 Cytochrome oxidase assembly protein LG3211_0487 PF01040 UbiA prenyltransferase family LG3211_0488 PF01979 Amidohydrolase family LG3211_0489 PF13593 SBF-like CPA transporter family (DUF4137) LG3211_0492 PF07676 WD40-like Beta Propeller Repeat LG3211_0492 PF00326 Prolyl oligopeptidase family LG3211_0496 PF10410 DnaB-helicase binding domain of primase LG3211_0496 PF01807 CHC2 zinc finger LG3211_0496 PF08275 DNA primase catalytic core, N-terminal domain LG3211_0496 PF08278 DNA primase DnaG DnaB-binding LG3211_0497 PF03631 Virulence factor BrkB LG3211_0498 PF09424 Yqey-like protein LG3211_0499 PF01165 Ribosomal protein S21 LG3211_0500 PF00814 Glycoprotease family LG3211_0501 PF02152 Dihydroneopterin aldolase LG3211_0506 PF07715 TonB-dependent Receptor Plug Domain LG3211_0506 PF00593 TonB dependent receptor LG3211_0507 PF12627 Probable RNA and SrmB- binding site of polymerase A LG3211_0507 PF01743 Poly A polymerase head domain LG3211_0507 PF01966 HD domain LG3211_0508 PF08000 Bacterial PH domain LG3211_0509 PF08338 Domain of unknown function (DUF1731) LG3211_0509 PF01370 NAD dependent epimerase/dehydratase family LG3211_0510 PF01551 Peptidase family M23 LG3211_0510 PF10145 Phage-related minor tail protein LG3211_0510 PF01464 Transglycosylase SLT domain LG3211_0512 PF01925 Sulfite exporter TauE/SafE LG3211_0515 PF00593 TonB dependent receptor LG3211_0515 PF07715 TonB-dependent Receptor Plug Domain LG3211_0516 PF00593 TonB dependent receptor LG3211_0516 PF07715 TonB-dependent Receptor Plug Domain LG3211_0519 PF01323 DSBA-like thioredoxin domain LG3211_0520 PF01323 DSBA-like thioredoxin domain LG3211_0521 PF00034 Cytochrome c LG3211_0522 PF01926 50S ribosome-binding GTPase LG3211_0526 PF00128 Alpha amylase, catalytic domain LG3211_0528 PF00593 TonB dependent receptor LG3211_0528 PF07715 TonB-dependent Receptor Plug Domain LG3211_0530 PF00128 Alpha amylase, catalytic domain LG3211_0530 PF01373 Glycosyl hydrolase family 14 LG3211_0530 PF03423 Carbohydrate binding domain (family 25) LG3211_0531 PF00356 Bacterial regulatory proteins, lacI family LG3211_0532 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_0534 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LG3211_0537 PF03466 LysR substrate binding domain LG3211_0537 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0539 PF00311 Phosphoenolpyruvate carboxylase LG3211_0540 PF02583 Metal-sensitive transcriptional repressor LG3211_0541 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_0541 PF00107 Zinc-binding dehydrogenase LG3211_0542 PF00756 Putative esterase LG3211_0544 PF00873 AcrB/AcrD/AcrF family LG3211_0545 PF12833 Helix-turn-helix domain LG3211_0545 PF06719 AraC-type transcriptional regulator N-terminus LG3211_0551 PF05199 GMC oxidoreductase LG3211_0551 PF00732 GMC oxidoreductase LG3211_0555 PF00392 Bacterial regulatory proteins, gntR family LG3211_0555 PF00155 Aminotransferase class I and II LG3211_0559 PF03747 ADP-ribosylglycohydrolase LG3211_0561 PF00326 Prolyl oligopeptidase family LG3211_0561 PF07676 WD40-like Beta Propeller Repeat LG3211_0563 PF02645 Uncharacterised protein, DegV family COG1307 LG3211_0564 PF01323 DSBA-like thioredoxin domain LG3211_0566 PF01979 Amidohydrolase family LG3211_0567 PF01979 Amidohydrolase family LG3211_0573 PF00462 Glutaredoxin LG3211_0574 PF01522 Polysaccharide deacetylase LG3211_0577 PF00155 Aminotransferase class I and II LG3211_0579 PF03193 RsgA GTPase LG3211_0583 PF00106 short chain dehydrogenase LG3211_0584 PF03600 Citrate transporter LG3211_0585 PF07396 Phosphate-selective porin O and P LG3211_0586 PF00486 Transcriptional regulatory protein, C terminal LG3211_0586 PF00072 Response regulator receiver domain LG3211_0587 PF08521 Two-component sensor kinase N-terminal LG3211_0587 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0587 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0589 PF00390 Malic enzyme, N-terminal domain LG3211_0589 PF03949 Malic enzyme, NAD binding domain LG3211_0589 PF01515 Phosphate acetyl/butaryl transferase LG3211_0593 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0593 PF03466 LysR substrate binding domain LG3211_0595 PF02798 Glutathione S-transferase, N-terminal domain LG3211_0595 PF00043 Glutathione S-transferase, C-terminal domain LG3211_0596 PF00893 Small Multidrug Resistance protein LG3211_0597 PF17831 Pyruvate dehydrogenase E1 component middle domain LG3211_0597 PF00456 Transketolase, thiamine diphosphate binding domain LG3211_0600 PF00665 Integrase core domain LG3211_0600 PF13333 Integrase core domain LG3211_0600 PF13276 HTH-like domain LG3211_0601 PF01527 Transposase LG3211_0609 PF07690 Major Facilitator Superfamily LG3211_0612 PF00797 N-acetyltransferase LG3211_0618 PF01037 Lrp/AsnC ligand binding domain LG3211_0619 PF08450 SMP-30/Gluconolactonase/LRE-like region LG3211_0623 PF03795 YCII-related domain LG3211_0625 PF01980 tRNA-methyltransferase O LG3211_0625 PF18389 TrmO C-terminal domain LG3211_0627 PF00005 ABC transporter LG3211_0628 PF01061 ABC-2 type transporter LG3211_0630 PF00324 Amino acid permease LG3211_0631 PF12450 von Willebrand factor LG3211_0631 PF12034 Domain of unknown function (DUF3520) LG3211_0631 PF00092 von Willebrand factor type A domain LG3211_0637 PF10282 Lactonase, 7-bladed beta-propeller LG3211_0638 PF00248 Aldo/keto reductase family LG3211_0640 PF01510 N-acetylmuramoyl-L-alanine amidase LG3211_0645 PF00313 'Cold-shock' DNA-binding domain LG3211_0649 PF01510 N-acetylmuramoyl-L-alanine amidase LG3211_0650 PF01554 MatE LG3211_0651 PF07690 Major Facilitator Superfamily LG3211_0658 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_0658 PF00529 HlyD membrane-fusion protein of T1SS LG3211_0659 PF00873 AcrB/AcrD/AcrF family LG3211_0660 PF02321 Outer membrane efflux protein LG3211_0662 PF00155 Aminotransferase class I and II LG3211_0662 PF00392 Bacterial regulatory proteins, gntR family LG3211_0665 PF01139 tRNA-splicing ligase RtcB LG3211_0673 PF00857 Isochorismatase family LG3211_0675 PF01037 Lrp/AsnC ligand binding domain LG3211_0675 PF13404 AsnC-type helix-turn-helix domain LG3211_0689 PF13472 GDSL-like Lipase/Acylhydrolase family LG3211_0690 PF00005 ABC transporter LG3211_0694 PF08468 Methyltransferase small domain N-terminal LG3211_0694 PF05175 Methyltransferase small domain LG3211_0695 PF01479 S4 domain LG3211_0695 PF00849 RNA pseudouridylate synthase LG3211_0696 PF13419 Haloacid dehalogenase-like hydrolase LG3211_0698 PF04461 Protein of unknown function (DUF520) LG3211_0699 PF00107 Zinc-binding dehydrogenase LG3211_0699 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_0701 PF00892 EamA-like transporter family LG3211_0706 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LG3211_0706 PF00364 Biotin-requiring enzyme LG3211_0706 PF02817 e3 binding domain LG3211_0708 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LG3211_0708 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_0712 PF00119 ATP synthase A chain LG3211_0713 PF00137 ATP synthase subunit C LG3211_0714 PF00430 ATP synthase B/B' CF(0) LG3211_0715 PF00213 ATP synthase delta (OSCP) subunit LG3211_0716 PF02874 ATP synthase alpha/beta family, beta-barrel domain LG3211_0716 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LG3211_0716 PF00306 ATP synthase alpha/beta chain, C terminal domain LG3211_0717 PF00231 ATP synthase LG3211_0718 PF02874 ATP synthase alpha/beta family, beta-barrel domain LG3211_0718 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LG3211_0719 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LG3211_0719 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LG3211_0721 PF00535 Glycosyl transferase family 2 LG3211_0723 PF12804 MobA-like NTP transferase domain LG3211_0723 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_0723 PF14602 Hexapeptide repeat of succinyl-transferase LG3211_0724 PF00704 Glycosyl hydrolases family 18 LG3211_0727 PF01022 Bacterial regulatory protein, arsR family LG3211_0728 PF00512 His Kinase A (phospho-acceptor) domain LG3211_0728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_0728 PF08448 PAS fold LG3211_0728 PF00072 Response regulator receiver domain LG3211_0728 PF13426 PAS domain LG3211_0729 PF00072 Response regulator receiver domain LG3211_0729 PF02954 Bacterial regulatory protein, Fis family LG3211_0729 PF00158 Sigma-54 interaction domain LG3211_0732 PF12704 MacB-like periplasmic core domain LG3211_0732 PF02687 FtsX-like permease family LG3211_0732 PF00005 ABC transporter LG3211_0733 PF00005 ABC transporter LG3211_0733 PF12704 MacB-like periplasmic core domain LG3211_0733 PF02687 FtsX-like permease family LG3211_0734 PF00005 ABC transporter LG3211_0734 PF12704 MacB-like periplasmic core domain LG3211_0734 PF02687 FtsX-like permease family LG3211_0737 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_0738 PF01380 SIS domain LG3211_0739 PF13333 Integrase core domain LG3211_0739 PF00665 Integrase core domain LG3211_0739 PF13276 HTH-like domain LG3211_0740 PF01527 Transposase LG3211_0751 PF07715 TonB-dependent Receptor Plug Domain LG3211_0751 PF00593 TonB dependent receptor LG3211_0754 PF13185 GAF domain LG3211_0757 PF01242 6-pyruvoyl tetrahydropterin synthase LG3211_0759 PF00293 NUDIX domain LG3211_0760 PF04324 BFD-like [2Fe-2S] binding domain LG3211_0761 PF00210 Ferritin-like domain LG3211_0766 PF01521 Iron-sulphur cluster biosynthesis LG3211_0767 PF00293 NUDIX domain LG3211_0767 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain LG3211_0767 PF09297 NADH pyrophosphatase zinc ribbon domain LG3211_0772 PF07715 TonB-dependent Receptor Plug Domain LG3211_0772 PF00593 TonB dependent receptor LG3211_0775 PF07690 Major Facilitator Superfamily LG3211_0783 PF00107 Zinc-binding dehydrogenase LG3211_0783 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_0784 PF00106 short chain dehydrogenase LG3211_0789 PF02798 Glutathione S-transferase, N-terminal domain LG3211_0789 PF00043 Glutathione S-transferase, C-terminal domain LG3211_0796 PF02844 Phosphoribosylglycinamide synthetase, N domain LG3211_0796 PF02843 Phosphoribosylglycinamide synthetase, C domain LG3211_0796 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LG3211_0798 PF01808 AICARFT/IMPCHase bienzyme LG3211_0798 PF02142 MGS-like domain LG3211_0800 PF01066 CDP-alcohol phosphatidyltransferase LG3211_0801 PF12146 Serine aminopeptidase, S33 LG3211_0801 PF12147 Putative methyltransferase LG3211_0802 PF00782 Dual specificity phosphatase, catalytic domain LG3211_0810 PF02954 Bacterial regulatory protein, Fis family LG3211_0815 PF00289 Biotin carboxylase, N-terminal domain LG3211_0815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LG3211_0815 PF02785 Biotin carboxylase C-terminal domain LG3211_0817 PF00364 Biotin-requiring enzyme LG3211_0818 PF01220 Dehydroquinase class II LG3211_0820 PF08534 Redoxin LG3211_0821 PF11412 Disulphide bond corrector protein DsbC LG3211_0821 PF02683 Cytochrome C biogenesis protein transmembrane region LG3211_0822 PF03091 CutA1 divalent ion tolerance protein LG3211_0825 PF03706 Lysylphosphatidylglycerol synthase TM region LG3211_0825 PF09924 Uncharacterised conserved protein (DUF2156) LG3211_0826 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0826 PF03466 LysR substrate binding domain LG3211_0827 PF00550 Phosphopantetheine attachment site LG3211_0827 PF16197 Ketoacyl-synthetase C-terminal extension LG3211_0827 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_0827 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_0827 PF14765 Polyketide synthase dehydratase LG3211_0827 PF00698 Acyl transferase domain LG3211_0827 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_0827 PF00107 Zinc-binding dehydrogenase LG3211_0827 PF08659 KR domain LG3211_0828 PF04231 Endonuclease I LG3211_0833 PF00166 Chaperonin 10 Kd subunit LG3211_0834 PF00118 TCP-1/cpn60 chaperonin family LG3211_0842 PF07732 Multicopper oxidase LG3211_0842 PF07731 Multicopper oxidase LG3211_0846 PF03710 Glutamate-ammonia ligase adenylyltransferase LG3211_0846 PF08335 GlnD PII-uridylyltransferase LG3211_0849 PF00881 Nitroreductase family LG3211_0850 PF04264 YceI-like domain LG3211_0851 PF02678 Pirin LG3211_0851 PF17954 Quercetinase C-terminal cupin domain LG3211_0855 PF03279 Bacterial lipid A biosynthesis acyltransferase LG3211_0856 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) LG3211_0857 PF02321 Outer membrane efflux protein LG3211_0859 PF00440 Bacterial regulatory proteins, tetR family LG3211_0860 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_0861 PF00873 AcrB/AcrD/AcrF family LG3211_0863 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LG3211_0863 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LG3211_0864 PF00230 Major intrinsic protein LG3211_0865 PF01266 FAD dependent oxidoreductase LG3211_0865 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LG3211_0866 PF00180 Isocitrate/isopropylmalate dehydrogenase LG3211_0867 PF00694 Aconitase C-terminal domain LG3211_0868 PF00330 Aconitase family (aconitate hydratase) LG3211_0869 PF00682 HMGL-like LG3211_0869 PF08502 LeuA allosteric (dimerisation) domain LG3211_0871 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_0872 PF01063 Amino-transferase class IV LG3211_0874 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LG3211_0874 PF00205 Thiamine pyrophosphate enzyme, central domain LG3211_0874 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LG3211_0875 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LG3211_0875 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LG3211_0876 PF00920 Dehydratase family LG3211_0879 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_0879 PF14821 Threonine synthase N terminus LG3211_0880 PF00288 GHMP kinases N terminal domain LG3211_0880 PF08544 GHMP kinases C terminal LG3211_0881 PF03447 Homoserine dehydrogenase, NAD binding domain LG3211_0881 PF00742 Homoserine dehydrogenase LG3211_0881 PF13840 ACT domain LG3211_0881 PF01842 ACT domain LG3211_0881 PF00696 Amino acid kinase family LG3211_0882 PF01161 Phosphatidylethanolamine-binding protein LG3211_0885 PF01964 Radical SAM ThiC family LG3211_0885 PF13667 ThiC-associated domain LG3211_0887 PF00486 Transcriptional regulatory protein, C terminal LG3211_0890 PF07715 TonB-dependent Receptor Plug Domain LG3211_0890 PF00593 TonB dependent receptor LG3211_0891 PF00082 Subtilase family LG3211_0891 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_0892 PF14521 Lysine-specific metallo-endopeptidase LG3211_0896 PF00719 Inorganic pyrophosphatase LG3211_0902 PF03030 Inorganic H+ pyrophosphatase LG3211_0908 PF00365 Phosphofructokinase LG3211_0910 PF02875 Mur ligase family, glutamate ligase domain LG3211_0910 PF01225 Mur ligase family, catalytic domain LG3211_0910 PF08245 Mur ligase middle domain LG3211_0911 PF09335 SNARE associated Golgi protein LG3211_0917 PF00202 Aminotransferase class-III LG3211_0918 PF01230 HIT domain LG3211_0919 PF07715 TonB-dependent Receptor Plug Domain LG3211_0919 PF00593 TonB dependent receptor LG3211_0920 PF00202 Aminotransferase class-III LG3211_0921 PF02581 Thiamine monophosphate synthase LG3211_0922 PF00301 Rubredoxin LG3211_0929 PF00664 ABC transporter transmembrane region LG3211_0929 PF00005 ABC transporter LG3211_0930 PF11798 IMS family HHH motif LG3211_0930 PF11799 impB/mucB/samB family C-terminal domain LG3211_0930 PF00817 impB/mucB/samB family LG3211_0932 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LG3211_0934 PF01812 5-formyltetrahydrofolate cyclo-ligase family LG3211_0935 PF05164 Cell division protein ZapA LG3211_0937 PF00990 Diguanylate cyclase, GGDEF domain LG3211_0937 PF00563 EAL domain LG3211_0937 PF03707 Bacterial signalling protein N terminal repeat LG3211_0939 PF03695 Uncharacterised protein family (UPF0149) LG3211_0940 PF00557 Metallopeptidase family M24 LG3211_0940 PF05195 Aminopeptidase P, N-terminal domain LG3211_0941 PF03466 LysR substrate binding domain LG3211_0941 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_0946 PF00557 Metallopeptidase family M24 LG3211_0949 PF04055 Radical SAM superfamily LG3211_0949 PF06969 HemN C-terminal domain LG3211_0951 PF01725 Ham1 family LG3211_0952 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_0953 PF01138 3' exoribonuclease family, domain 1 LG3211_0953 PF03725 3' exoribonuclease family, domain 2 LG3211_0954 PF08340 Domain of unknown function (DUF1732) LG3211_0954 PF03755 YicC-like family, N-terminal region LG3211_0955 PF00625 Guanylate kinase LG3211_0956 PF01192 RNA polymerase Rpb6 LG3211_0958 PF02824 TGS domain LG3211_0958 PF13291 ACT domain LG3211_0958 PF04607 Region found in RelA / SpoT proteins LG3211_0959 PF01042 Endoribonuclease L-PSP LG3211_0963 PF00593 TonB dependent receptor LG3211_0963 PF07715 TonB-dependent Receptor Plug Domain LG3211_0964 PF00270 DEAD/DEAH box helicase LG3211_0964 PF17191 RecG wedge domain LG3211_0964 PF00271 Helicase conserved C-terminal domain LG3211_0966 PF01156 Inosine-uridine preferring nucleoside hydrolase LG3211_0967 PF01197 Ribosomal protein L31 LG3211_0969 PF00285 Citrate synthase, C-terminal domain LG3211_0972 PF00905 Penicillin binding protein transpeptidase domain LG3211_0972 PF00912 Transglycosylase LG3211_0972 PF17092 Penicillin-binding protein OB-like domain LG3211_0978 PF11741 AMIN domain LG3211_0978 PF07660 Secretin and TonB N terminus short domain LG3211_0978 PF00263 Bacterial type II and III secretion system protein LG3211_0978 PF03958 Bacterial type II/III secretion system short domain LG3211_0979 PF07726 ATPase family associated with various cellular activities (AAA) LG3211_0979 PF17863 AAA lid domain LG3211_0985 PF00375 Sodium:dicarboxylate symporter family LG3211_0986 PF02779 Transketolase, pyrimidine binding domain LG3211_0986 PF00456 Transketolase, thiamine diphosphate binding domain LG3211_0986 PF02780 Transketolase, C-terminal domain LG3211_0988 PF00563 EAL domain LG3211_0988 PF00990 Diguanylate cyclase, GGDEF domain LG3211_0988 PF03707 Bacterial signalling protein N terminal repeat LG3211_0991 PF03459 TOBE domain LG3211_0991 PF00005 ABC transporter LG3211_0992 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_0997 PF03922 OmpW family LG3211_0998 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LG3211_0998 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LG3211_1002 PF08267 Cobalamin-independent synthase, N-terminal domain LG3211_1002 PF01717 Cobalamin-independent synthase, Catalytic domain LG3211_1004 PF00593 TonB dependent receptor LG3211_1004 PF07715 TonB-dependent Receptor Plug Domain LG3211_1005 PF00248 Aldo/keto reductase family LG3211_1008 PF00268 Ribonucleotide reductase, small chain LG3211_1009 PF00317 Ribonucleotide reductase, all-alpha domain LG3211_1009 PF02867 Ribonucleotide reductase, barrel domain LG3211_1009 PF03477 ATP cone domain LG3211_1014 PF00162 Phosphoglycerate kinase LG3211_1015 PF13419 Haloacid dehalogenase-like hydrolase LG3211_1020 PF02887 Pyruvate kinase, alpha/beta domain LG3211_1020 PF00224 Pyruvate kinase, barrel domain LG3211_1022 PF00274 Fructose-bisphosphate aldolase class-I LG3211_1025 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_1028 PF00873 AcrB/AcrD/AcrF family LG3211_1031 PF08032 RNA 2'-O ribose methyltransferase substrate binding LG3211_1031 PF00588 SpoU rRNA Methylase family LG3211_1033 PF02225 PA domain LG3211_1033 PF04389 Peptidase family M28 LG3211_1034 PF01741 Large-conductance mechanosensitive channel, MscL LG3211_1035 PF01557 Fumarylacetoacetate (FAA) hydrolase family LG3211_1039 PF02390 Putative methyltransferase LG3211_1040 PF05690 Thiazole biosynthesis protein ThiG LG3211_1045 PF00657 GDSL-like Lipase/Acylhydrolase LG3211_1045 PF03797 Autotransporter beta-domain LG3211_1046 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LG3211_1046 PF00326 Prolyl oligopeptidase family LG3211_1048 PF09572 XamI restriction endonuclease LG3211_1049 PF02384 N-6 DNA Methylase LG3211_1052 PF18030 RimK PreATP-grasp domain LG3211_1052 PF08443 RimK-like ATP-grasp domain LG3211_1053 PF08443 RimK-like ATP-grasp domain LG3211_1053 PF18030 RimK PreATP-grasp domain LG3211_1054 PF00486 Transcriptional regulatory protein, C terminal LG3211_1054 PF00072 Response regulator receiver domain LG3211_1055 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1055 PF08521 Two-component sensor kinase N-terminal LG3211_1057 PF01063 Amino-transferase class IV LG3211_1060 PF02219 Methylenetetrahydrofolate reductase LG3211_1063 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LG3211_1063 PF05221 S-adenosyl-L-homocysteine hydrolase LG3211_1070 PF00438 S-adenosylmethionine synthetase, N-terminal domain LG3211_1070 PF02772 S-adenosylmethionine synthetase, central domain LG3211_1070 PF02773 S-adenosylmethionine synthetase, C-terminal domain LG3211_1073 PF01177 Asp/Glu/Hydantoin racemase LG3211_1076 PF01207 Dihydrouridine synthase (Dus) LG3211_1077 PF07411 Domain of unknown function (DUF1508) LG3211_1079 PF07715 TonB-dependent Receptor Plug Domain LG3211_1079 PF00593 TonB dependent receptor LG3211_1080 PF00294 pfkB family carbohydrate kinase LG3211_1081 PF01773 Na+ dependent nucleoside transporter N-terminus LG3211_1081 PF07670 Nucleoside recognition LG3211_1081 PF07662 Na+ dependent nucleoside transporter C-terminus LG3211_1082 PF00072 Response regulator receiver domain LG3211_1082 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1083 PF01169 Uncharacterized protein family UPF0016 LG3211_1086 PF00248 Aldo/keto reductase family LG3211_1089 PF07715 TonB-dependent Receptor Plug Domain LG3211_1089 PF00593 TonB dependent receptor LG3211_1092 PF13180 PDZ domain LG3211_1095 PF16200 C-terminal region of band_7 LG3211_1095 PF01145 SPFH domain / Band 7 family LG3211_1099 PF01571 Aminomethyltransferase folate-binding domain LG3211_1099 PF08669 Glycine cleavage T-protein C-terminal barrel domain LG3211_1102 PF01597 Glycine cleavage H-protein LG3211_1107 PF00144 Beta-lactamase LG3211_1108 PF00732 GMC oxidoreductase LG3211_1108 PF05199 GMC oxidoreductase LG3211_1111 PF00149 Calcineurin-like phosphoesterase LG3211_1116 PF03358 NADPH-dependent FMN reductase LG3211_1118 PF07690 Major Facilitator Superfamily LG3211_1121 PF09317 Domain of unknown function (DUF1974) LG3211_1121 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_1121 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_1121 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_1122 PF00440 Bacterial regulatory proteins, tetR family LG3211_1123 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain LG3211_1123 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain LG3211_1124 PF08281 Sigma-70, region 4 LG3211_1124 PF04542 Sigma-70 region 2 LG3211_1128 PF00593 TonB dependent receptor LG3211_1128 PF07715 TonB-dependent Receptor Plug Domain LG3211_1129 PF00593 TonB dependent receptor LG3211_1129 PF07715 TonB-dependent Receptor Plug Domain LG3211_1131 PF01430 Hsp33 protein LG3211_1132 PF00912 Transglycosylase LG3211_1133 PF00535 Glycosyl transferase family 2 LG3211_1135 PF05170 AsmA family LG3211_1136 PF03006 Haemolysin-III related LG3211_1141 PF00009 Elongation factor Tu GTP binding domain LG3211_1141 PF16658 Class II release factor RF3, C-terminal domain LG3211_1143 PF01551 Peptidase family M23 LG3211_1145 PF00561 alpha/beta hydrolase fold LG3211_1146 PF01053 Cys/Met metabolism PLP-dependent enzyme LG3211_1147 PF03447 Homoserine dehydrogenase, NAD binding domain LG3211_1147 PF00742 Homoserine dehydrogenase LG3211_1147 PF00696 Amino acid kinase family LG3211_1150 PF13564 DoxX-like family LG3211_1151 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1151 PF03466 LysR substrate binding domain LG3211_1152 PF00041 Fibronectin type III domain LG3211_1152 PF00553 Cellulose binding domain LG3211_1152 PF00704 Glycosyl hydrolases family 18 LG3211_1156 PF00704 Glycosyl hydrolases family 18 LG3211_1156 PF00041 Fibronectin type III domain LG3211_1156 PF00553 Cellulose binding domain LG3211_1157 PF12697 Alpha/beta hydrolase family LG3211_1158 PF00034 Cytochrome c LG3211_1158 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LG3211_1158 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LG3211_1159 PF00111 2Fe-2S iron-sulfur cluster binding domain LG3211_1159 PF01799 [2Fe-2S] binding domain LG3211_1160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LG3211_1160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LG3211_1163 PF03313 Serine dehydratase alpha chain LG3211_1163 PF03315 Serine dehydratase beta chain LG3211_1166 PF01292 Prokaryotic cytochrome b561 LG3211_1168 PF00072 Response regulator receiver domain LG3211_1168 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1168 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1168 PF01627 Hpt domain LG3211_1169 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1169 PF00672 HAMP domain LG3211_1169 PF17149 Periplasmic sensor domain found in signal transduction proteins LG3211_1169 PF00072 Response regulator receiver domain LG3211_1169 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1169 PF01627 Hpt domain LG3211_1170 PF17149 Periplasmic sensor domain found in signal transduction proteins LG3211_1170 PF00072 Response regulator receiver domain LG3211_1170 PF01627 Hpt domain LG3211_1170 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1170 PF00672 HAMP domain LG3211_1170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1173 PF01208 Uroporphyrinogen decarboxylase (URO-D) LG3211_1176 PF12833 Helix-turn-helix domain LG3211_1176 PF01965 DJ-1/PfpI family LG3211_1177 PF00857 Isochorismatase family LG3211_1180 PF01761 3-dehydroquinate synthase LG3211_1181 PF01202 Shikimate kinase LG3211_1184 PF01243 Pyridoxamine 5'-phosphate oxidase LG3211_1184 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region LG3211_1185 PF00583 Acetyltransferase (GNAT) family LG3211_1198 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LG3211_1198 PF11867 Domain of unknown function (DUF3387) LG3211_1198 PF18766 SWI2/SNF2 ATPase LG3211_1200 PF02384 N-6 DNA Methylase LG3211_1200 PF12161 HsdM N-terminal domain LG3211_1203 PF01527 Transposase LG3211_1204 PF13276 HTH-like domain LG3211_1204 PF00665 Integrase core domain LG3211_1204 PF13333 Integrase core domain LG3211_1206 PF00561 alpha/beta hydrolase fold LG3211_1207 PF03280 Proteobacterial lipase chaperone protein LG3211_1209 PF14748 Pyrroline-5-carboxylate reductase dimerisation LG3211_1209 PF03807 NADP oxidoreductase coenzyme F420-dependent LG3211_1210 PF01168 Alanine racemase, N-terminal domain LG3211_1211 PF00437 Type II/IV secretion system protein LG3211_1212 PF00437 Type II/IV secretion system protein LG3211_1219 PF00355 Rieske [2Fe-2S] domain LG3211_1220 PF13687 Domain of unknown function (DUF4153) LG3211_1221 PF13673 Acetyltransferase (GNAT) domain LG3211_1221 PF03352 Methyladenine glycosylase LG3211_1221 PF13302 Acetyltransferase (GNAT) domain LG3211_1221 PF00117 Glutamine amidotransferase class-I LG3211_1221 PF00958 GMP synthase C terminal domain LG3211_1222 PF02622 Uncharacterized ACR, COG1678 LG3211_1223 PF03652 Holliday junction resolvase LG3211_1224 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LG3211_1224 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LG3211_1225 PF03831 PhnA domain LG3211_1225 PF08274 PhnA Zinc-Ribbon LG3211_1226 PF03448 MgtE intracellular N domain LG3211_1226 PF01769 Divalent cation transporter LG3211_1226 PF00571 CBS domain LG3211_1228 PF05524 PEP-utilising enzyme, N-terminal LG3211_1228 PF00391 PEP-utilising enzyme, mobile domain LG3211_1228 PF02896 PEP-utilising enzyme, TIM barrel domain LG3211_1229 PF00381 PTS HPr component phosphorylation site LG3211_1233 PF03668 P-loop ATPase protein family LG3211_1234 PF07475 HPr Serine kinase C-terminal domain LG3211_1234 PF02603 HPr Serine kinase N terminus LG3211_1235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LG3211_1236 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LG3211_1237 PF04963 Sigma-54 factor, core binding domain LG3211_1237 PF04552 Sigma-54, DNA binding domain LG3211_1237 PF00309 Sigma-54 factor, Activator interacting domain (AID) LG3211_1238 PF12399 Branched-chain amino acid ATP-binding cassette transporter LG3211_1238 PF00005 ABC transporter LG3211_1239 PF03968 OstA-like protein LG3211_1242 PF00571 CBS domain LG3211_1242 PF01380 SIS domain LG3211_1243 PF01722 BolA-like protein LG3211_1244 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LG3211_1247 PF00551 Formyl transferase LG3211_1248 PF07715 TonB-dependent Receptor Plug Domain LG3211_1248 PF00593 TonB dependent receptor LG3211_1249 PF07969 Amidohydrolase family LG3211_1250 PF07702 UTRA domain LG3211_1250 PF00392 Bacterial regulatory proteins, gntR family LG3211_1251 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LG3211_1251 PF01676 Metalloenzyme superfamily LG3211_1258 PF13419 Haloacid dehalogenase-like hydrolase LG3211_1264 PF02769 AIR synthase related protein, C-terminal domain LG3211_1264 PF00586 AIR synthase related protein, N-terminal domain LG3211_1266 PF01594 AI-2E family transporter LG3211_1267 PF00308 Bacterial dnaA protein LG3211_1269 PF01661 Macro domain LG3211_1270 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family LG3211_1271 PF00483 Nucleotidyl transferase LG3211_1272 PF01636 Phosphotransferase enzyme family LG3211_1273 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_1274 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LG3211_1274 PF10414 Sirohaem synthase dimerisation region LG3211_1274 PF14824 Sirohaem biosynthesis protein central LG3211_1276 PF03466 LysR substrate binding domain LG3211_1276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1277 PF01507 Phosphoadenosine phosphosulfate reductase family LG3211_1278 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LG3211_1278 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LG3211_1280 PF00667 FAD binding domain LG3211_1280 PF00258 Flavodoxin LG3211_1280 PF00175 Oxidoreductase NAD-binding domain LG3211_1281 PF01507 Phosphoadenosine phosphosulfate reductase family LG3211_1282 PF00009 Elongation factor Tu GTP binding domain LG3211_1287 PF00667 FAD binding domain LG3211_1287 PF00258 Flavodoxin LG3211_1287 PF00175 Oxidoreductase NAD-binding domain LG3211_1288 PF02424 ApbE family LG3211_1292 PF13640 2OG-Fe(II) oxygenase superfamily LG3211_1292 PF18331 PKHD-type hydroxylase C-terminal domain LG3211_1293 PF07715 TonB-dependent Receptor Plug Domain LG3211_1293 PF00593 TonB dependent receptor LG3211_1294 PF00355 Rieske [2Fe-2S] domain LG3211_1296 PF00266 Aminotransferase class-V LG3211_1298 PF01458 Uncharacterized protein family (UPF0051) LG3211_1299 PF00005 ABC transporter LG3211_1302 PF01458 Uncharacterized protein family (UPF0051) LG3211_1310 PF00892 EamA-like transporter family LG3211_1314 PF03328 HpcH/HpaI aldolase/citrate lyase family LG3211_1315 PF02655 ATP-grasp domain LG3211_1315 PF00206 Lyase LG3211_1316 PF06276 Ferric iron reductase FhuF-like transporter LG3211_1316 PF04183 IucA / IucC family LG3211_1318 PF04183 IucA / IucC family LG3211_1318 PF06276 Ferric iron reductase FhuF-like transporter LG3211_1320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LG3211_1320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LG3211_1322 PF01810 LysE type translocator LG3211_1324 PF12794 Mechanosensitive ion channel inner membrane domain 1 LG3211_1324 PF12795 Mechanosensitive ion channel porin domain LG3211_1324 PF00924 Mechanosensitive ion channel LG3211_1327 PF03764 Elongation factor G, domain IV LG3211_1327 PF00009 Elongation factor Tu GTP binding domain LG3211_1327 PF00679 Elongation factor G C-terminus LG3211_1327 PF14492 Elongation Factor G, domain II LG3211_1328 PF02566 OsmC-like protein LG3211_1329 PF00561 alpha/beta hydrolase fold LG3211_1331 PF13193 AMP-binding enzyme C-terminal domain LG3211_1331 PF16177 Acetyl-coenzyme A synthetase N-terminus LG3211_1331 PF00501 AMP-binding enzyme LG3211_1335 PF00285 Citrate synthase, C-terminal domain LG3211_1337 PF02798 Glutathione S-transferase, N-terminal domain LG3211_1337 PF00043 Glutathione S-transferase, C-terminal domain LG3211_1340 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_1340 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LG3211_1343 PF06470 SMC proteins Flexible Hinge Domain LG3211_1343 PF02463 RecF/RecN/SMC N terminal domain LG3211_1345 PF03144 Elongation factor Tu domain 2 LG3211_1345 PF00009 Elongation factor Tu GTP binding domain LG3211_1345 PF03764 Elongation factor G, domain IV LG3211_1345 PF14492 Elongation Factor G, domain II LG3211_1345 PF00679 Elongation factor G C-terminus LG3211_1346 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_1346 PF00107 Zinc-binding dehydrogenase LG3211_1348 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1348 PF03466 LysR substrate binding domain LG3211_1349 PF07690 Major Facilitator Superfamily LG3211_1350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1350 PF03466 LysR substrate binding domain LG3211_1351 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LG3211_1352 PF03972 MmgE/PrpD family LG3211_1353 PF00691 OmpA family LG3211_1354 PF00691 OmpA family LG3211_1354 PF05736 OprF membrane domain LG3211_1356 PF01479 S4 domain LG3211_1356 PF00849 RNA pseudouridylate synthase LG3211_1359 PF00155 Aminotransferase class I and II LG3211_1361 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_1361 PF00107 Zinc-binding dehydrogenase LG3211_1362 PF10459 Peptidase S46 LG3211_1363 PF10459 Peptidase S46 LG3211_1365 PF10459 Peptidase S46 LG3211_1369 PF01842 ACT domain LG3211_1369 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LG3211_1369 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LG3211_1370 PF00300 Histidine phosphatase superfamily (branch 1) LG3211_1372 PF02875 Mur ligase family, glutamate ligase domain LG3211_1372 PF08245 Mur ligase middle domain LG3211_1375 PF00156 Phosphoribosyl transferase domain LG3211_1376 PF04305 Protein of unknown function (DUF455) LG3211_1379 PF00149 Calcineurin-like phosphoesterase LG3211_1380 PF00749 tRNA synthetases class I (E and Q), catalytic domain LG3211_1381 PF01475 Ferric uptake regulator family LG3211_1385 PF00593 TonB dependent receptor LG3211_1385 PF07715 TonB-dependent Receptor Plug Domain LG3211_1391 PF01979 Amidohydrolase family LG3211_1393 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LG3211_1393 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LG3211_1396 PF00041 Fibronectin type III domain LG3211_1396 PF03065 Glycosyl hydrolase family 57 LG3211_1396 PF03423 Carbohydrate binding domain (family 25) LG3211_1401 PF01625 Peptide methionine sulfoxide reductase LG3211_1402 PF00440 Bacterial regulatory proteins, tetR family LG3211_1403 PF17391 Urocanase N-terminal domain LG3211_1403 PF01175 Urocanase Rossmann-like domain LG3211_1403 PF17392 Urocanase C-terminal domain LG3211_1405 PF01554 MatE LG3211_1411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1411 PF03466 LysR substrate binding domain LG3211_1412 PF00107 Zinc-binding dehydrogenase LG3211_1412 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_1414 PF00583 Acetyltransferase (GNAT) family LG3211_1419 PF01467 Cytidylyltransferase-like LG3211_1419 PF00293 NUDIX domain LG3211_1422 PF00550 Phosphopantetheine attachment site LG3211_1422 PF16197 Ketoacyl-synthetase C-terminal extension LG3211_1422 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_1422 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_1422 PF00698 Acyl transferase domain LG3211_1422 PF08659 KR domain LG3211_1422 PF14765 Polyketide synthase dehydratase LG3211_1422 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_1424 PF01541 GIY-YIG catalytic domain LG3211_1425 PF00487 Fatty acid desaturase LG3211_1429 PF03449 Transcription elongation factor, N-terminal LG3211_1429 PF01272 Transcription elongation factor, GreA/GreB, C-term LG3211_1431 PF00270 DEAD/DEAH box helicase LG3211_1431 PF03880 DbpA RNA binding domain LG3211_1431 PF00271 Helicase conserved C-terminal domain LG3211_1436 PF01433 Peptidase family M1 domain LG3211_1436 PF11838 ERAP1-like C-terminal domain LG3211_1437 PF00593 TonB dependent receptor LG3211_1437 PF07715 TonB-dependent Receptor Plug Domain LG3211_1439 PF03466 LysR substrate binding domain LG3211_1439 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1443 PF03466 LysR substrate binding domain LG3211_1445 PF00248 Aldo/keto reductase family LG3211_1450 PF00384 Molybdopterin oxidoreductase LG3211_1451 PF02634 FdhD/NarQ family LG3211_1452 PF07690 Major Facilitator Superfamily LG3211_1460 PF07715 TonB-dependent Receptor Plug Domain LG3211_1460 PF00593 TonB dependent receptor LG3211_1463 PF13302 Acetyltransferase (GNAT) domain LG3211_1464 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LG3211_1471 PF07690 Major Facilitator Superfamily LG3211_1472 PF01022 Bacterial regulatory protein, arsR family LG3211_1474 PF00375 Sodium:dicarboxylate symporter family LG3211_1476 PF00293 NUDIX domain LG3211_1477 PF00675 Insulinase (Peptidase family M16) LG3211_1477 PF05193 Peptidase M16 inactive domain LG3211_1480 PF03358 NADPH-dependent FMN reductase LG3211_1483 PF00877 NlpC/P60 family LG3211_1484 PF00877 NlpC/P60 family LG3211_1485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_1486 PF04235 Protein of unknown function (DUF418) LG3211_1488 PF01483 Proprotein convertase P-domain LG3211_1488 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_1488 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_1488 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_1490 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_1490 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_1490 PF01483 Proprotein convertase P-domain LG3211_1490 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_1492 PF01266 FAD dependent oxidoreductase LG3211_1493 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_1493 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LG3211_1494 PF07676 WD40-like Beta Propeller Repeat LG3211_1494 PF00326 Prolyl oligopeptidase family LG3211_1496 PF06224 Winged helix DNA-binding domain LG3211_1500 PF00204 DNA gyrase B LG3211_1500 PF00986 DNA gyrase B subunit, carboxyl terminus LG3211_1500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1500 PF01751 Toprim domain LG3211_1505 PF06418 CTP synthase N-terminus LG3211_1505 PF00117 Glutamine amidotransferase class-I LG3211_1506 PF00793 DAHP synthetase I family LG3211_1507 PF03952 Enolase, N-terminal domain LG3211_1507 PF00113 Enolase, C-terminal TIM barrel domain LG3211_1508 PF04977 Septum formation initiator LG3211_1509 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LG3211_1510 PF02542 YgbB family LG3211_1511 PF01142 tRNA pseudouridine synthase D (TruD) LG3211_1514 PF00196 Bacterial regulatory proteins, luxR family LG3211_1514 PF03472 Autoinducer binding domain LG3211_1515 PF01975 Survival protein SurE LG3211_1517 PF09335 SNARE associated Golgi protein LG3211_1518 PF01551 Peptidase family M23 LG3211_1518 PF01476 LysM domain LG3211_1529 PF01985 CRS1 / YhbY (CRM) domain LG3211_1530 PF01728 FtsJ-like methyltransferase LG3211_1531 PF06480 FtsH Extracellular LG3211_1531 PF17862 AAA+ lid domain LG3211_1531 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_1531 PF01434 Peptidase family M41 LG3211_1532 PF00809 Pterin binding enzyme LG3211_1535 PF17209 Hfq protein LG3211_1536 PF16360 GTP-binding GTPase Middle Region LG3211_1536 PF01926 50S ribosome-binding GTPase LG3211_1536 PF13167 GTP-binding GTPase N-terminal LG3211_1537 PF01145 SPFH domain / Band 7 family LG3211_1537 PF12221 Bacterial membrane protein N terminal LG3211_1538 PF01145 SPFH domain / Band 7 family LG3211_1542 PF00709 Adenylosuccinate synthetase LG3211_1543 PF02525 Flavodoxin-like fold LG3211_1548 PF12796 Ankyrin repeats (3 copies) LG3211_1554 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1554 PF03466 LysR substrate binding domain LG3211_1558 PF04389 Peptidase family M28 LG3211_1562 PF00072 Response regulator receiver domain LG3211_1562 PF04397 LytTr DNA-binding domain LG3211_1563 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1563 PF06580 Histidine kinase LG3211_1563 PF00672 HAMP domain LG3211_1563 PF02743 Cache domain LG3211_1565 PF03707 Bacterial signalling protein N terminal repeat LG3211_1565 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1565 PF00563 EAL domain LG3211_1569 PF01212 Beta-eliminating lyase LG3211_1570 PF02347 Glycine cleavage system P-protein LG3211_1571 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_1572 PF07690 Major Facilitator Superfamily LG3211_1573 PF04185 Phosphoesterase family LG3211_1573 PF05506 Domain of unknown function (DUF756) LG3211_1574 PF13520 Amino acid permease LG3211_1575 PF00355 Rieske [2Fe-2S] domain LG3211_1575 PF00848 Ring hydroxylating alpha subunit (catalytic domain) LG3211_1576 PF00092 von Willebrand factor type A domain LG3211_1586 PF00486 Transcriptional regulatory protein, C terminal LG3211_1590 PF12833 Helix-turn-helix domain LG3211_1590 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term LG3211_1591 PF13382 Adenine deaminase C-terminal domain LG3211_1591 PF01979 Amidohydrolase family LG3211_1599 PF03776 Septum formation topological specificity factor MinE LG3211_1600 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LG3211_1601 PF03775 Septum formation inhibitor MinC, C-terminal domain LG3211_1601 PF05209 Septum formation inhibitor MinC, N-terminal domain LG3211_1603 PF07730 Histidine kinase LG3211_1604 PF00072 Response regulator receiver domain LG3211_1604 PF00196 Bacterial regulatory proteins, luxR family LG3211_1607 PF00730 HhH-GPD superfamily base excision DNA repair protein LG3211_1609 PF08241 Methyltransferase domain LG3211_1610 PF02557 D-alanyl-D-alanine carboxypeptidase LG3211_1616 PF01370 NAD dependent epimerase/dehydratase family LG3211_1616 PF02222 ATP-grasp domain LG3211_1624 PF04376 Arginine-tRNA-protein transferase, N terminus LG3211_1624 PF04377 Arginine-tRNA-protein transferase, C terminus LG3211_1629 PF04542 Sigma-70 region 2 LG3211_1629 PF08281 Sigma-70, region 4 LG3211_1636 PF01170 Putative RNA methylase family UPF0020 LG3211_1636 PF02926 THUMP domain LG3211_1636 PF10672 S-adenosylmethionine-dependent methyltransferase LG3211_1637 PF13649 Methyltransferase domain LG3211_1638 PF02678 Pirin LG3211_1638 PF05726 Pirin C-terminal cupin domain LG3211_1641 PF00230 Major intrinsic protein LG3211_1643 PF02678 Pirin LG3211_1643 PF05726 Pirin C-terminal cupin domain LG3211_1647 PF17757 UvrB interaction domain LG3211_1647 PF03461 TRCF domain LG3211_1647 PF00271 Helicase conserved C-terminal domain LG3211_1647 PF00270 DEAD/DEAH box helicase LG3211_1647 PF02559 CarD-like/TRCF domain LG3211_1656 PF07715 TonB-dependent Receptor Plug Domain LG3211_1656 PF00593 TonB dependent receptor LG3211_1657 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LG3211_1657 PF13378 Enolase C-terminal domain-like LG3211_1658 PF08450 SMP-30/Gluconolactonase/LRE-like region LG3211_1660 PF05035 2-keto-3-deoxy-galactonokinase LG3211_1661 PF01081 KDPG and KHG aldolase LG3211_1662 PF09234 Domain of unknown function (DUF1963) LG3211_1665 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ LG3211_1667 PF00072 Response regulator receiver domain LG3211_1667 PF00486 Transcriptional regulatory protein, C terminal LG3211_1668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1668 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1668 PF00672 HAMP domain LG3211_1671 PF06123 Inner membrane protein CreD LG3211_1674 PF01569 PAP2 superfamily LG3211_1675 PF13439 Glycosyltransferase Family 4 LG3211_1675 PF00534 Glycosyl transferases group 1 LG3211_1676 PF04349 Periplasmic glucan biosynthesis protein, MdoG LG3211_1677 PF13632 Glycosyl transferase family group 2 LG3211_1678 PF13193 AMP-binding enzyme C-terminal domain LG3211_1678 PF00501 AMP-binding enzyme LG3211_1679 PF02541 Ppx/GppA phosphatase family LG3211_1680 PF13089 Polyphosphate kinase N-terminal domain LG3211_1680 PF02503 Polyphosphate kinase middle domain LG3211_1680 PF17941 Polyphosphate kinase C-terminal domain 1 LG3211_1680 PF13090 Polyphosphate kinase C-terminal domain 2 LG3211_1681 PF00989 PAS fold LG3211_1681 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1681 PF11808 Phosphate regulon sensor protein PhoR LG3211_1681 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1682 PF00486 Transcriptional regulatory protein, C terminal LG3211_1682 PF00072 Response regulator receiver domain LG3211_1683 PF01435 Peptidase family M48 LG3211_1683 PF13181 Tetratricopeptide repeat LG3211_1685 PF00462 Glutaredoxin LG3211_1687 PF00180 Isocitrate/isopropylmalate dehydrogenase LG3211_1687 PF18324 Hypothetical protein TT1725 LG3211_1690 PF03553 Na+/H+ antiporter family LG3211_1692 PF00753 Metallo-beta-lactamase superfamily LG3211_1692 PF16123 Hydroxyacylglutathione hydrolase C-terminus LG3211_1693 PF08241 Methyltransferase domain LG3211_1694 PF00075 RNase H LG3211_1695 PF00929 Exonuclease LG3211_1703 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LG3211_1706 PF04055 Radical SAM superfamily LG3211_1706 PF06463 Molybdenum Cofactor Synthesis C LG3211_1708 PF01967 MoaC family LG3211_1710 PF02391 MoaE protein LG3211_1715 PF13229 Right handed beta helix region LG3211_1715 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) LG3211_1715 PF12708 Pectate lyase superfamily protein LG3211_1719 PF12170 DNA polymerase III tau subunit V interacting with alpha LG3211_1719 PF12169 DNA polymerase III subunits gamma and tau domain III LG3211_1720 PF02575 YbaB/EbfC DNA-binding family LG3211_1722 PF13662 Toprim domain LG3211_1722 PF02132 RecR protein LG3211_1723 PF01230 HIT domain LG3211_1725 PF01841 Transglutaminase-like superfamily LG3211_1725 PF13559 Domain of unknown function (DUF4129) LG3211_1725 PF11992 Domain of unknown function (DUF3488) LG3211_1727 PF17863 AAA lid domain LG3211_1727 PF07726 ATPase family associated with various cellular activities (AAA) LG3211_1729 PF02545 Maf-like protein LG3211_1731 PF02620 Large ribosomal RNA subunit accumulation protein YceD LG3211_1732 PF01783 Ribosomal L32p protein family LG3211_1733 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LG3211_1733 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LG3211_1734 PF00698 Acyl transferase domain LG3211_1738 PF00550 Phosphopantetheine attachment site LG3211_1739 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_1739 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_1740 PF01063 Amino-transferase class IV LG3211_1741 PF02618 YceG-like family LG3211_1742 PF02223 Thymidylate kinase LG3211_1745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LG3211_1745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LG3211_1745 PF00378 Enoyl-CoA hydratase/isomerase LG3211_1747 PF08281 Sigma-70, region 4 LG3211_1747 PF04542 Sigma-70 region 2 LG3211_1749 PF13180 PDZ domain LG3211_1749 PF17820 PDZ domain LG3211_1750 PF00009 Elongation factor Tu GTP binding domain LG3211_1750 PF03144 Elongation factor Tu domain 2 LG3211_1750 PF06421 GTP-binding protein LepA C-terminus LG3211_1750 PF00679 Elongation factor G C-terminus LG3211_1751 PF10502 Signal peptidase, peptidase S26 LG3211_1753 PF14622 Ribonuclease-III-like LG3211_1753 PF00035 Double-stranded RNA binding motif LG3211_1754 PF07650 KH domain LG3211_1754 PF01926 50S ribosome-binding GTPase LG3211_1755 PF11967 Recombination protein O N terminal LG3211_1755 PF02565 Recombination protein O C terminal LG3211_1760 PF05958 tRNA (Uracil-5-)-methyltransferase LG3211_1762 PF00933 Glycosyl hydrolase family 3 N terminal domain LG3211_1764 PF01048 Phosphorylase superfamily LG3211_1765 PF00313 'Cold-shock' DNA-binding domain LG3211_1766 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_1766 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_1766 PF18158 Adaptive response protein AidB N-terminal domain LG3211_1771 PF00089 Trypsin LG3211_1771 PF02983 Alpha-lytic protease prodomain LG3211_1772 PF00089 Trypsin LG3211_1772 PF02983 Alpha-lytic protease prodomain LG3211_1773 PF00664 ABC transporter transmembrane region LG3211_1773 PF00005 ABC transporter LG3211_1774 PF01205 Uncharacterized protein family UPF0029 LG3211_1776 PF08281 Sigma-70, region 4 LG3211_1776 PF04542 Sigma-70 region 2 LG3211_1777 PF08448 PAS fold LG3211_1777 PF08447 PAS fold LG3211_1777 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1777 PF00563 EAL domain LG3211_1778 PF12034 Domain of unknown function (DUF3520) LG3211_1778 PF12450 von Willebrand factor LG3211_1778 PF00092 von Willebrand factor type A domain LG3211_1779 PF00171 Aldehyde dehydrogenase family LG3211_1780 PF00205 Thiamine pyrophosphate enzyme, central domain LG3211_1780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LG3211_1780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LG3211_1782 PF13742 OB-fold nucleic acid binding domain LG3211_1782 PF02601 Exonuclease VII, large subunit LG3211_1783 PF04551 GcpE protein LG3211_1784 PF01569 PAP2 superfamily LG3211_1785 PF00082 Subtilase family LG3211_1785 PF02225 PA domain LG3211_1785 PF05922 Peptidase inhibitor I9 LG3211_1785 PF13860 FlgD Ig-like domain LG3211_1789 PF00082 Subtilase family LG3211_1789 PF05922 Peptidase inhibitor I9 LG3211_1789 PF13860 FlgD Ig-like domain LG3211_1789 PF02225 PA domain LG3211_1793 PF00892 EamA-like transporter family LG3211_1794 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LG3211_1794 PF01565 FAD binding domain LG3211_1795 PF01180 Dihydroorotate dehydrogenase LG3211_1801 PF00171 Aldehyde dehydrogenase family LG3211_1806 PF01527 Transposase LG3211_1807 PF13276 HTH-like domain LG3211_1807 PF00665 Integrase core domain LG3211_1807 PF13333 Integrase core domain LG3211_1817 PF17755 UvrA DNA-binding domain LG3211_1817 PF17760 UvrA interaction domain LG3211_1817 PF00005 ABC transporter LG3211_1818 PF03989 DNA gyrase C-terminal domain, beta-propeller LG3211_1818 PF00521 DNA gyrase/topoisomerase IV, subunit A LG3211_1821 PF13533 Biotin-lipoyl like LG3211_1822 PF00873 AcrB/AcrD/AcrF family LG3211_1823 PF00486 Transcriptional regulatory protein, C terminal LG3211_1823 PF00072 Response regulator receiver domain LG3211_1824 PF00672 HAMP domain LG3211_1824 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1824 PF00512 His Kinase A (phospho-acceptor) domain LG3211_1829 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1829 PF03466 LysR substrate binding domain LG3211_1831 PF00942 Cellulose binding domain LG3211_1831 PF03442 Carbohydrate binding domain X2 LG3211_1832 PF00703 Glycosyl hydrolases family 2 LG3211_1832 PF02836 Glycosyl hydrolases family 2, TIM barrel domain LG3211_1832 PF02837 Glycosyl hydrolases family 2, sugar binding domain LG3211_1835 PF16338 Domain of unknown function (DUF4968) LG3211_1835 PF01055 Glycosyl hydrolases family 31 LG3211_1835 PF17137 Domain of unknown function (DUF5110) LG3211_1837 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LG3211_1837 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LG3211_1839 PF00083 Sugar (and other) transporter LG3211_1840 PF14310 Fibronectin type III-like domain LG3211_1840 PF00933 Glycosyl hydrolase family 3 N terminal domain LG3211_1840 PF01915 Glycosyl hydrolase family 3 C-terminal domain LG3211_1842 PF13004 Putative binding domain, N-terminal LG3211_1842 PF00150 Cellulase (glycosyl hydrolase family 5) LG3211_1844 PF06964 Alpha-L-arabinofuranosidase C-terminal domain LG3211_1848 PF13333 Integrase core domain LG3211_1848 PF13276 HTH-like domain LG3211_1848 PF00665 Integrase core domain LG3211_1849 PF01527 Transposase LG3211_1855 PF01510 N-acetylmuramoyl-L-alanine amidase LG3211_1856 PF02734 DAK2 domain LG3211_1856 PF02733 Dak1 domain LG3211_1858 PF01612 3'-5' exonuclease LG3211_1858 PF00570 HRDC domain LG3211_1861 PF00106 short chain dehydrogenase LG3211_1862 PF07879 PHB/PHA accumulation regulator DNA-binding domain LG3211_1862 PF05233 PHB accumulation regulatory domain LG3211_1863 PF00106 short chain dehydrogenase LG3211_1864 PF00749 tRNA synthetases class I (E and Q), catalytic domain LG3211_1865 PF01435 Peptidase family M48 LG3211_1866 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1866 PF00563 EAL domain LG3211_1866 PF00072 Response regulator receiver domain LG3211_1867 PF04055 Radical SAM superfamily LG3211_1869 PF01132 Elongation factor P (EF-P) OB domain LG3211_1869 PF08207 Elongation factor P (EF-P) KOW-like domain LG3211_1869 PF09285 Elongation factor P, C-terminal LG3211_1871 PF01979 Amidohydrolase family LG3211_1873 PF13419 Haloacid dehalogenase-like hydrolase LG3211_1875 PF02649 Type I GTP cyclohydrolase folE2 LG3211_1876 PF00072 Response regulator receiver domain LG3211_1876 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1878 PF08460 Bacterial SH3 domain LG3211_1878 PF01551 Peptidase family M23 LG3211_1879 PF01979 Amidohydrolase family LG3211_1881 PF01258 Prokaryotic dksA/traR C4-type zinc finger LG3211_1882 PF07690 Major Facilitator Superfamily LG3211_1883 PF02657 Fe-S metabolism associated domain LG3211_1884 PF09190 DALR domain LG3211_1884 PF01406 tRNA synthetases class I (C) catalytic domain LG3211_1887 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LG3211_1887 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LG3211_1888 PF00764 Arginosuccinate synthase LG3211_1889 PF07687 Peptidase dimerisation domain LG3211_1889 PF01546 Peptidase family M20/M25/M40 LG3211_1890 PF00696 Amino acid kinase family LG3211_1890 PF04768 NAT, N-acetyltransferase, of N-acetylglutamate synthase LG3211_1892 PF01118 Semialdehyde dehydrogenase, NAD binding domain LG3211_1893 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LG3211_1893 PF03129 Anticodon binding domain LG3211_1894 PF00206 Lyase LG3211_1895 PF00696 Amino acid kinase family LG3211_1895 PF01472 PUA domain LG3211_1896 PF00171 Aldehyde dehydrogenase family LG3211_1897 PF00144 Beta-lactamase LG3211_1898 PF00072 Response regulator receiver domain LG3211_1898 PF04397 LytTr DNA-binding domain LG3211_1899 PF06580 Histidine kinase LG3211_1899 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_1899 PF07694 5TMR of 5TMR-LYT LG3211_1901 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_1903 PF00440 Bacterial regulatory proteins, tetR family LG3211_1903 PF16859 Tetracyclin repressor-like, C-terminal domain LG3211_1904 PF03466 LysR substrate binding domain LG3211_1904 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1908 PF12697 Alpha/beta hydrolase family LG3211_1911 PF03466 LysR substrate binding domain LG3211_1911 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1912 PF00043 Glutathione S-transferase, C-terminal domain LG3211_1912 PF02798 Glutathione S-transferase, N-terminal domain LG3211_1914 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1914 PF03466 LysR substrate binding domain LG3211_1915 PF01425 Amidase LG3211_1918 PF00535 Glycosyl transferase family 2 LG3211_1919 PF14883 Hypothetical glycosyl hydrolase family 13 LG3211_1919 PF01522 Polysaccharide deacetylase LG3211_1926 PF02709 N-terminal domain of galactosyltransferase LG3211_1926 PF00535 Glycosyl transferase family 2 LG3211_1927 PF01522 Polysaccharide deacetylase LG3211_1929 PF05736 OprF membrane domain LG3211_1929 PF00691 OmpA family LG3211_1940 PF13393 Histidyl-tRNA synthetase LG3211_1940 PF03129 Anticodon binding domain LG3211_1941 PF00221 Aromatic amino acid lyase LG3211_1943 PF00990 Diguanylate cyclase, GGDEF domain LG3211_1943 PF00563 EAL domain LG3211_1943 PF03707 Bacterial signalling protein N terminal repeat LG3211_1943 PF13188 PAS domain LG3211_1945 PF01634 ATP phosphoribosyltransferase LG3211_1945 PF08029 HisG, C-terminal domain LG3211_1946 PF00815 Histidinol dehydrogenase LG3211_1947 PF00155 Aminotransferase class I and II LG3211_1948 PF00475 Imidazoleglycerol-phosphate dehydratase LG3211_1949 PF00117 Glutamine amidotransferase class-I LG3211_1950 PF00977 Histidine biosynthesis protein LG3211_1951 PF00977 Histidine biosynthesis protein LG3211_1952 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LG3211_1952 PF01502 Phosphoribosyl-AMP cyclohydrolase LG3211_1960 PF03079 ARD/ARD' family LG3211_1961 PF00596 Class II Aldolase and Adducin N-terminal domain LG3211_1962 PF13520 Amino acid permease LG3211_1963 PF13520 Amino acid permease LG3211_1968 PF12833 Helix-turn-helix domain LG3211_1969 PF04185 Phosphoesterase family LG3211_1969 PF05506 Domain of unknown function (DUF756) LG3211_1972 PF08207 Elongation factor P (EF-P) KOW-like domain LG3211_1972 PF09285 Elongation factor P, C-terminal LG3211_1972 PF01132 Elongation factor P (EF-P) OB domain LG3211_1973 PF00106 short chain dehydrogenase LG3211_1992 PF01494 FAD binding domain LG3211_1993 PF01042 Endoribonuclease L-PSP LG3211_1994 PF03466 LysR substrate binding domain LG3211_1994 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_1995 PF00561 alpha/beta hydrolase fold LG3211_1997 PF08281 Sigma-70, region 4 LG3211_1997 PF04542 Sigma-70 region 2 LG3211_1997 PF12680 SnoaL-like domain LG3211_1999 PF02627 Carboxymuconolactone decarboxylase family LG3211_2001 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2001 PF03466 LysR substrate binding domain LG3211_2003 PF02566 OsmC-like protein LG3211_2008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2008 PF03466 LysR substrate binding domain LG3211_2010 PF02525 Flavodoxin-like fold LG3211_2012 PF10091 Putative glucoamylase LG3211_2012 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain LG3211_2012 PF06165 Glycosyltransferase family 36 LG3211_2015 PF03707 Bacterial signalling protein N terminal repeat LG3211_2015 PF00563 EAL domain LG3211_2015 PF00990 Diguanylate cyclase, GGDEF domain LG3211_2016 PF00682 HMGL-like LG3211_2020 PF00289 Biotin carboxylase, N-terminal domain LG3211_2020 PF00364 Biotin-requiring enzyme LG3211_2020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LG3211_2020 PF02785 Biotin carboxylase C-terminal domain LG3211_2023 PF00378 Enoyl-CoA hydratase/isomerase LG3211_2025 PF02421 Ferrous iron transport protein B LG3211_2025 PF07670 Nucleoside recognition LG3211_2025 PF07664 Ferrous iron transport protein B C terminus LG3211_2025 PF17910 FeoB cytosolic helical domain LG3211_2025 PF04023 FeoA domain LG3211_2032 PF00012 Hsp70 protein LG3211_2033 PF01039 Carboxyl transferase domain LG3211_2036 PF02803 Thiolase, C-terminal domain LG3211_2036 PF00108 Thiolase, N-terminal domain LG3211_2038 PF12951 Passenger-associated-transport-repeat LG3211_2038 PF03797 Autotransporter beta-domain LG3211_2038 PF00082 Subtilase family LG3211_2039 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_2039 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_2039 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_2040 PF00194 Eukaryotic-type carbonic anhydrase LG3211_2041 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain LG3211_2041 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LG3211_2045 PF01642 Methylmalonyl-CoA mutase LG3211_2045 PF02310 B12 binding domain LG3211_2046 PF04389 Peptidase family M28 LG3211_2046 PF01483 Proprotein convertase P-domain LG3211_2053 PF01527 Transposase LG3211_2054 PF13276 HTH-like domain LG3211_2054 PF00665 Integrase core domain LG3211_2054 PF13333 Integrase core domain LG3211_2056 PF00089 Trypsin LG3211_2056 PF02983 Alpha-lytic protease prodomain LG3211_2058 PF00089 Trypsin LG3211_2058 PF02983 Alpha-lytic protease prodomain LG3211_2060 PF03033 Glycosyltransferase family 28 N-terminal domain LG3211_2067 PF01431 Peptidase family M13 LG3211_2067 PF05649 Peptidase family M13 LG3211_2072 PF00264 Common central domain of tyrosinase LG3211_2084 PF12146 Serine aminopeptidase, S33 LG3211_2089 PF00889 Elongation factor TS LG3211_2097 PF03466 LysR substrate binding domain LG3211_2097 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2099 PF00440 Bacterial regulatory proteins, tetR family LG3211_2102 PF00583 Acetyltransferase (GNAT) family LG3211_2110 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family LG3211_2116 PF01042 Endoribonuclease L-PSP LG3211_2119 PF07722 Peptidase C26 LG3211_2120 PF04107 Glutamate-cysteine ligase family 2(GCS2) LG3211_2124 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LG3211_2124 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LG3211_2126 PF07690 Major Facilitator Superfamily LG3211_2126 PF00083 Sugar (and other) transporter LG3211_2128 PF01863 Protein of unknown function DUF45 LG3211_2132 PF07690 Major Facilitator Superfamily LG3211_2133 PF13439 Glycosyltransferase Family 4 LG3211_2133 PF00534 Glycosyl transferases group 1 LG3211_2134 PF00550 Phosphopantetheine attachment site LG3211_2134 PF09277 Erythronolide synthase, docking LG3211_2134 PF08990 Erythronolide synthase docking LG3211_2134 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_2134 PF00698 Acyl transferase domain LG3211_2134 PF08659 KR domain LG3211_2134 PF16197 Ketoacyl-synthetase C-terminal extension LG3211_2134 PF14765 Polyketide synthase dehydratase LG3211_2134 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_2134 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_2135 PF00376 MerR family regulatory protein LG3211_2135 PF09278 MerR, DNA binding LG3211_2152 PF00144 Beta-lactamase LG3211_2152 PF11954 Domain of unknown function (DUF3471) LG3211_2154 PF07859 alpha/beta hydrolase fold LG3211_2155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2155 PF03466 LysR substrate binding domain LG3211_2156 PF07995 Glucose / Sorbosone dehydrogenase LG3211_2159 PF00912 Transglycosylase LG3211_2159 PF00905 Penicillin binding protein transpeptidase domain LG3211_2159 PF06832 Penicillin-Binding Protein C-terminus Family LG3211_2161 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LG3211_2161 PF00207 Alpha-2-macroglobulin family LG3211_2161 PF01835 MG2 domain LG3211_2161 PF17962 Bacterial macroglobulin domain 6 LG3211_2161 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LG3211_2161 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LG3211_2161 PF07703 Alpha-2-macroglobulin bait region domain LG3211_2165 PF00296 Luciferase-like monooxygenase LG3211_2166 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_2169 PF00486 Transcriptional regulatory protein, C terminal LG3211_2170 PF01272 Transcription elongation factor, GreA/GreB, C-term LG3211_2170 PF03449 Transcription elongation factor, N-terminal LG3211_2171 PF04170 NlpE N-terminal domain LG3211_2172 PF05872 Bacterial protein of unknown function (DUF853) LG3211_2177 PF02666 Phosphatidylserine decarboxylase LG3211_2178 PF02630 SCO1/SenC LG3211_2179 PF05175 Methyltransferase small domain LG3211_2181 PF01264 Chorismate synthase LG3211_2182 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LG3211_2182 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LG3211_2183 PF01118 Semialdehyde dehydrogenase, NAD binding domain LG3211_2183 PF02774 Semialdehyde dehydrogenase, dimerisation domain LG3211_2185 PF01416 tRNA pseudouridine synthase LG3211_2186 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LG3211_2187 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_2188 PF00290 Tryptophan synthase alpha chain LG3211_2189 PF17848 Acetyl-coA carboxylase zinc finger domain LG3211_2189 PF01039 Carboxyl transferase domain LG3211_2190 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LG3211_2190 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LG3211_2190 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LG3211_2190 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LG3211_2191 PF00884 Sulfatase LG3211_2191 PF11893 Domain of unknown function (DUF3413) LG3211_2196 PF00121 Triosephosphate isomerase LG3211_2199 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LG3211_2200 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LG3211_2201 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LG3211_2202 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LG3211_2204 PF10531 SLBB domain LG3211_2204 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LG3211_2204 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LG3211_2205 PF00384 Molybdopterin oxidoreductase LG3211_2205 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal LG3211_2205 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LG3211_2206 PF00146 NADH dehydrogenase LG3211_2207 PF12838 4Fe-4S dicluster domain LG3211_2208 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LG3211_2209 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LG3211_2210 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LG3211_2210 PF00361 Proton-conducting membrane transporter LG3211_2211 PF00361 Proton-conducting membrane transporter LG3211_2211 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LG3211_2212 PF00361 Proton-conducting membrane transporter LG3211_2215 PF02576 RimP N-terminal domain LG3211_2215 PF17384 RimP C-terminal SH3 domain LG3211_2216 PF08529 NusA N-terminal domain LG3211_2216 PF13184 NusA-like KH domain LG3211_2216 PF00575 S1 RNA binding domain LG3211_2217 PF08364 Bacterial translation initiation factor IF-2 associated region LG3211_2217 PF11987 Translation-initiation factor 2 LG3211_2217 PF04760 Translation initiation factor IF-2, N-terminal region LG3211_2217 PF00009 Elongation factor Tu GTP binding domain LG3211_2218 PF02033 Ribosome-binding factor A LG3211_2219 PF03928 Haem-degrading LG3211_2220 PF16198 tRNA pseudouridylate synthase B C-terminal domain LG3211_2220 PF09157 Pseudouridine synthase II TruB, C-terminal LG3211_2220 PF01509 TruB family pseudouridylate synthase (N terminal domain) LG3211_2221 PF00312 Ribosomal protein S15 LG3211_2223 PF00013 KH domain LG3211_2223 PF00575 S1 RNA binding domain LG3211_2223 PF01138 3' exoribonuclease family, domain 1 LG3211_2223 PF03725 3' exoribonuclease family, domain 2 LG3211_2223 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LG3211_2238 PF03466 LysR substrate binding domain LG3211_2238 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2239 PF03466 LysR substrate binding domain LG3211_2239 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2247 PF00593 TonB dependent receptor LG3211_2247 PF07715 TonB-dependent Receptor Plug Domain LG3211_2249 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2249 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2249 PF02743 Cache domain LG3211_2250 PF00072 Response regulator receiver domain LG3211_2251 PF01336 OB-fold nucleic acid binding domain LG3211_2251 PF14579 Helix-hairpin-helix motif LG3211_2251 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LG3211_2251 PF07733 Bacterial DNA polymerase III alpha NTPase domain LG3211_2251 PF02811 PHP domain LG3211_2254 PF00717 Peptidase S24-like LG3211_2254 PF01726 LexA DNA binding domain LG3211_2257 PF01370 NAD dependent epimerase/dehydratase family LG3211_2257 PF08338 Domain of unknown function (DUF1731) LG3211_2265 PF00171 Aldehyde dehydrogenase family LG3211_2266 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_2266 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_2266 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_2267 PF00378 Enoyl-CoA hydratase/isomerase LG3211_2268 PF00378 Enoyl-CoA hydratase/isomerase LG3211_2269 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LG3211_2269 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LG3211_2270 PF02677 Epoxyqueuosine reductase QueH LG3211_2274 PF00583 Acetyltransferase (GNAT) family LG3211_2274 PF13380 CoA binding domain LG3211_2274 PF13607 Succinyl-CoA ligase like flavodoxin domain LG3211_2277 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_2277 PF00107 Zinc-binding dehydrogenase LG3211_2278 PF00486 Transcriptional regulatory protein, C terminal LG3211_2278 PF00072 Response regulator receiver domain LG3211_2279 PF00027 Cyclic nucleotide-binding domain LG3211_2279 PF13545 Crp-like helix-turn-helix domain LG3211_2280 PF13426 PAS domain LG3211_2280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2280 PF00072 Response regulator receiver domain LG3211_2288 PF01654 Cytochrome bd terminal oxidase subunit I LG3211_2289 PF02322 Cytochrome bd terminal oxidase subunit II LG3211_2290 PF08173 Membrane bound YbgT-like protein LG3211_2292 PF00582 Universal stress protein family LG3211_2296 PF01590 GAF domain LG3211_2296 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2296 PF08446 PAS fold LG3211_2296 PF00360 Phytochrome region LG3211_2296 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2297 PF01668 SmpB protein LG3211_2298 PF03364 Polyketide cyclase / dehydrase and lipid transport LG3211_2299 PF03658 RnfH family Ubiquitin LG3211_2300 PF04355 SmpA / OmlA family LG3211_2301 PF01475 Ferric uptake regulator family LG3211_2302 PF02463 RecF/RecN/SMC N terminal domain LG3211_2304 PF01628 HrcA protein C terminal domain LG3211_2304 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LG3211_2305 PF01025 GrpE LG3211_2306 PF00012 Hsp70 protein LG3211_2307 PF00226 DnaJ domain LG3211_2307 PF01556 DnaJ C terminal domain LG3211_2307 PF00684 DnaJ central domain LG3211_2312 PF05173 Dihydrodipicolinate reductase, C-terminus LG3211_2312 PF01113 Dihydrodipicolinate reductase, N-terminus LG3211_2313 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LG3211_2313 PF00117 Glutamine amidotransferase class-I LG3211_2315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LG3211_2315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LG3211_2315 PF02142 MGS-like domain LG3211_2317 PF01272 Transcription elongation factor, GreA/GreB, C-term LG3211_2317 PF03449 Transcription elongation factor, N-terminal LG3211_2319 PF01368 DHH family LG3211_2319 PF02272 DHHA1 domain LG3211_2319 PF17768 RecJ OB domain LG3211_2321 PF00183 Hsp90 protein LG3211_2321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2324 PF01112 Asparaginase LG3211_2325 PF03932 CutC family LG3211_2329 PF00593 TonB dependent receptor LG3211_2329 PF07715 TonB-dependent Receptor Plug Domain LG3211_2330 PF17678 Glycosyl hydrolase family 92 N-terminal domain LG3211_2330 PF07971 Glycosyl hydrolase family 92 LG3211_2331 PF07691 PA14 domain LG3211_2331 PF00728 Glycosyl hydrolase family 20, catalytic domain LG3211_2331 PF02838 Glycosyl hydrolase family 20, domain 2 LG3211_2333 PF00593 TonB dependent receptor LG3211_2333 PF07715 TonB-dependent Receptor Plug Domain LG3211_2336 PF00472 RF-1 domain LG3211_2336 PF03462 PCRF domain LG3211_2337 PF00152 tRNA synthetases class II (D, K and N) LG3211_2337 PF01336 OB-fold nucleic acid binding domain LG3211_2338 PF00072 Response regulator receiver domain LG3211_2339 PF00072 Response regulator receiver domain LG3211_2339 PF01627 Hpt domain LG3211_2339 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2339 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2340 PF00378 Enoyl-CoA hydratase/isomerase LG3211_2341 PF00501 AMP-binding enzyme LG3211_2341 PF13193 AMP-binding enzyme C-terminal domain LG3211_2343 PF00330 Aconitase family (aconitate hydratase) LG3211_2343 PF00694 Aconitase C-terminal domain LG3211_2344 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2344 PF03466 LysR substrate binding domain LG3211_2345 PF04303 PrpF protein LG3211_2347 PF00005 ABC transporter LG3211_2348 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_2352 PF11791 Aconitate B N-terminal domain LG3211_2352 PF06434 Aconitate hydratase 2 N-terminus LG3211_2352 PF00330 Aconitase family (aconitate hydratase) LG3211_2354 PF04356 Protein of unknown function (DUF489) LG3211_2356 PF00293 NUDIX domain LG3211_2358 PF02617 ATP-dependent Clp protease adaptor protein ClpS LG3211_2359 PF07724 AAA domain (Cdc48 subfamily) LG3211_2359 PF17871 AAA lid domain LG3211_2359 PF02861 Clp amino terminal domain, pathogenicity island component LG3211_2359 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_2359 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_2365 PF01176 Translation initiation factor 1A / IF-1 LG3211_2366 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LG3211_2368 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_2370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LG3211_2370 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LG3211_2372 PF01580 FtsK/SpoIIIE family LG3211_2372 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LG3211_2372 PF17854 FtsK alpha domain LG3211_2372 PF09397 Ftsk gamma domain LG3211_2373 PF03548 Outer membrane lipoprotein carrier protein LolA LG3211_2376 PF12002 MgsA AAA+ ATPase C terminal LG3211_2376 PF16193 AAA C-terminal domain LG3211_2376 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_2377 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LG3211_2382 PF08479 POTRA domain, ShlB-type LG3211_2382 PF17287 POTRA domain LG3211_2382 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LG3211_2384 PF01618 MotA/TolQ/ExbB proton channel family LG3211_2385 PF02472 Biopolymer transport protein ExbD/TolR LG3211_2393 PF12849 PBP superfamily domain LG3211_2395 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_2396 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_2397 PF08402 TOBE domain LG3211_2397 PF00005 ABC transporter LG3211_2398 PF13416 Bacterial extracellular solute-binding protein LG3211_2403 PF03466 LysR substrate binding domain LG3211_2403 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2404 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_2404 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_2404 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_2408 PF00106 short chain dehydrogenase LG3211_2409 PF00376 MerR family regulatory protein LG3211_2409 PF09278 MerR, DNA binding LG3211_2410 PF00403 Heavy-metal-associated domain LG3211_2411 PF08494 DEAD/H associated LG3211_2411 PF00271 Helicase conserved C-terminal domain LG3211_2411 PF00270 DEAD/DEAH box helicase LG3211_2415 PF02735 Ku70/Ku80 beta-barrel domain LG3211_2416 PF13298 DNA polymerase Ligase (LigD) LG3211_2416 PF01068 ATP dependent DNA ligase domain LG3211_2416 PF04679 ATP dependent DNA ligase C terminal region LG3211_2417 PF02308 MgtC family LG3211_2419 PF04972 BON domain LG3211_2423 PF07690 Major Facilitator Superfamily LG3211_2424 PF02311 AraC-like ligand binding domain LG3211_2424 PF12833 Helix-turn-helix domain LG3211_2427 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LG3211_2427 PF00128 Alpha amylase, catalytic domain LG3211_2429 PF00072 Response regulator receiver domain LG3211_2430 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2431 PF02104 SURF1 family LG3211_2432 PF03626 Prokaryotic Cytochrome C oxidase subunit IV LG3211_2433 PF00510 Cytochrome c oxidase subunit III LG3211_2434 PF00115 Cytochrome C and Quinol oxidase polypeptide I LG3211_2435 PF06481 COX Aromatic Rich Motif LG3211_2435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LG3211_2436 PF00083 Sugar (and other) transporter LG3211_2437 PF00266 Aminotransferase class-V LG3211_2440 PF07690 Major Facilitator Superfamily LG3211_2442 PF13533 Biotin-lipoyl like LG3211_2443 PF00873 AcrB/AcrD/AcrF family LG3211_2444 PF00873 AcrB/AcrD/AcrF family LG3211_2445 PF02321 Outer membrane efflux protein LG3211_2448 PF01551 Peptidase family M23 LG3211_2448 PF01476 LysM domain LG3211_2453 PF03594 Benzoate membrane transport protein LG3211_2455 PF00672 HAMP domain LG3211_2455 PF12729 Four helix bundle sensory module for signal transduction LG3211_2455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LG3211_2457 PF01739 CheR methyltransferase, SAM binding domain LG3211_2459 PF01584 CheW-like domain LG3211_2459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2459 PF01627 Hpt domain LG3211_2459 PF00072 Response regulator receiver domain LG3211_2460 PF00072 Response regulator receiver domain LG3211_2460 PF01339 CheB methylesterase LG3211_2461 PF00563 EAL domain LG3211_2461 PF01590 GAF domain LG3211_2461 PF00360 Phytochrome region LG3211_2461 PF00990 Diguanylate cyclase, GGDEF domain LG3211_2462 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_2462 PF00082 Subtilase family LG3211_2464 PF01037 Lrp/AsnC ligand binding domain LG3211_2465 PF01810 LysE type translocator LG3211_2471 PF00698 Acyl transferase domain LG3211_2475 PF13193 AMP-binding enzyme C-terminal domain LG3211_2475 PF00668 Condensation domain LG3211_2475 PF00550 Phosphopantetheine attachment site LG3211_2475 PF00501 AMP-binding enzyme LG3211_2475 PF00975 Thioesterase domain LG3211_2476 PF00550 Phosphopantetheine attachment site LG3211_2476 PF00501 AMP-binding enzyme LG3211_2476 PF13193 AMP-binding enzyme C-terminal domain LG3211_2476 PF00668 Condensation domain LG3211_2477 PF12706 Beta-lactamase superfamily domain LG3211_2477 PF18456 Diiron non-heme beta-hydroxylase N-terminal domain LG3211_2478 PF00664 ABC transporter transmembrane region LG3211_2478 PF00005 ABC transporter LG3211_2479 PF00873 AcrB/AcrD/AcrF family LG3211_2480 PF13533 Biotin-lipoyl like LG3211_2481 PF00873 AcrB/AcrD/AcrF family LG3211_2482 PF00455 DeoR C terminal sensor domain LG3211_2482 PF08220 DeoR-like helix-turn-helix domain LG3211_2485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LG3211_2485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LG3211_2489 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LG3211_2489 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LG3211_2489 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LG3211_2489 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LG3211_2491 PF00089 Trypsin LG3211_2492 PF02018 Carbohydrate binding domain LG3211_2492 PF00722 Glycosyl hydrolases family 16 LG3211_2493 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LG3211_2494 PF00384 Molybdopterin oxidoreductase LG3211_2494 PF04324 BFD-like [2Fe-2S] binding domain LG3211_2494 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LG3211_2494 PF01568 Molydopterin dinucleotide binding domain LG3211_2495 PF11723 Homotrimeric ring hydroxylase LG3211_2495 PF00355 Rieske [2Fe-2S] domain LG3211_2496 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LG3211_2496 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LG3211_2496 PF18267 Rubredoxin NAD+ reductase C-terminal domain LG3211_2496 PF04324 BFD-like [2Fe-2S] binding domain LG3211_2496 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_2497 PF07690 Major Facilitator Superfamily LG3211_2498 PF00005 ABC transporter LG3211_2499 PF08376 Nitrate and nitrite sensing LG3211_2499 PF03861 ANTAR domain LG3211_2500 PF10414 Sirohaem synthase dimerisation region LG3211_2500 PF14824 Sirohaem biosynthesis protein central LG3211_2500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LG3211_2502 PF01389 OmpA-like transmembrane domain LG3211_2502 PF00691 OmpA family LG3211_2507 PF04717 Type VI secretion system, phage-baseplate injector LG3211_2508 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_2508 PF07724 AAA domain (Cdc48 subfamily) LG3211_2508 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_2508 PF17871 AAA lid domain LG3211_2512 PF00196 Bacterial regulatory proteins, luxR family LG3211_2512 PF00072 Response regulator receiver domain LG3211_2524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2524 PF00072 Response regulator receiver domain LG3211_2524 PF09456 RcsC Alpha-Beta-Loop (ABL) LG3211_2524 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2528 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB LG3211_2528 PF08479 POTRA domain, ShlB-type LG3211_2531 PF00728 Glycosyl hydrolase family 20, catalytic domain LG3211_2531 PF02838 Glycosyl hydrolase family 20, domain 2 LG3211_2539 PF00916 Sulfate permease family LG3211_2539 PF01740 STAS domain LG3211_2544 PF08274 PhnA Zinc-Ribbon LG3211_2544 PF03831 PhnA domain LG3211_2545 PF03466 LysR substrate binding domain LG3211_2545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2546 PF00561 alpha/beta hydrolase fold LG3211_2548 PF00593 TonB dependent receptor LG3211_2548 PF07715 TonB-dependent Receptor Plug Domain LG3211_2549 PF07690 Major Facilitator Superfamily LG3211_2550 PF00294 pfkB family carbohydrate kinase LG3211_2551 PF00480 ROK family LG3211_2553 PF03466 LysR substrate binding domain LG3211_2553 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2557 PF17801 Alpha galactosidase C-terminal beta sandwich domain LG3211_2557 PF16499 Alpha galactosidase A LG3211_2559 PF00171 Aldehyde dehydrogenase family LG3211_2560 PF07690 Major Facilitator Superfamily LG3211_2561 PF00465 Iron-containing alcohol dehydrogenase LG3211_2562 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2562 PF03466 LysR substrate binding domain LG3211_2563 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase LG3211_2564 PF03466 LysR substrate binding domain LG3211_2564 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2570 PF03466 LysR substrate binding domain LG3211_2571 PF05922 Peptidase inhibitor I9 LG3211_2571 PF00082 Subtilase family LG3211_2571 PF02225 PA domain LG3211_2571 PF13860 FlgD Ig-like domain LG3211_2575 PF00717 Peptidase S24-like LG3211_2575 PF01381 Helix-turn-helix LG3211_2581 PF00665 Integrase core domain LG3211_2581 PF13333 Integrase core domain LG3211_2581 PF13276 HTH-like domain LG3211_2582 PF01527 Transposase LG3211_2586 PF05199 GMC oxidoreductase LG3211_2586 PF00732 GMC oxidoreductase LG3211_2590 PF03781 Sulfatase-modifying factor enzyme 1 LG3211_2591 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LG3211_2591 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LG3211_2592 PF02424 ApbE family LG3211_2594 PF03825 Nucleoside H+ symporter LG3211_2596 PF01261 Xylose isomerase-like TIM barrel LG3211_2597 PF01261 Xylose isomerase-like TIM barrel LG3211_2599 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain LG3211_2599 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LG3211_2600 PF00941 FAD binding domain in molybdopterin dehydrogenase LG3211_2600 PF03450 CO dehydrogenase flavoprotein C-terminal domain LG3211_2601 PF01799 [2Fe-2S] binding domain LG3211_2601 PF10518 TAT (twin-arginine translocation) pathway signal sequence LG3211_2601 PF00111 2Fe-2S iron-sulfur cluster binding domain LG3211_2604 PF01565 FAD binding domain LG3211_2604 PF02913 FAD linked oxidases, C-terminal domain LG3211_2605 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LG3211_2605 PF01842 ACT domain LG3211_2605 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LG3211_2609 PF01483 Proprotein convertase P-domain LG3211_2611 PF00196 Bacterial regulatory proteins, luxR family LG3211_2611 PF00072 Response regulator receiver domain LG3211_2612 PF12697 Alpha/beta hydrolase family LG3211_2614 PF00722 Glycosyl hydrolases family 16 LG3211_2617 PF07731 Multicopper oxidase LG3211_2617 PF07732 Multicopper oxidase LG3211_2617 PF00394 Multicopper oxidase LG3211_2618 PF05275 Copper resistance protein B precursor (CopB) LG3211_2622 PF01627 Hpt domain LG3211_2622 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2622 PF00072 Response regulator receiver domain LG3211_2622 PF00989 PAS fold LG3211_2622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2622 PF00497 Bacterial extracellular solute-binding proteins, family 3 LG3211_2623 PF00072 Response regulator receiver domain LG3211_2623 PF00196 Bacterial regulatory proteins, luxR family LG3211_2624 PF13488 Glycine zipper LG3211_2624 PF00691 OmpA family LG3211_2626 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain LG3211_2626 PF06974 Protein of unknown function (DUF1298) LG3211_2628 PF03441 FAD binding domain of DNA photolyase LG3211_2628 PF00875 DNA photolyase LG3211_2631 PF00082 Subtilase family LG3211_2631 PF05922 Peptidase inhibitor I9 LG3211_2632 PF00842 Alanine racemase, C-terminal domain LG3211_2632 PF01168 Alanine racemase, N-terminal domain LG3211_2636 PF05433 Glycine zipper 2TM domain LG3211_2639 PF04225 Opacity-associated protein A LysM-like domain LG3211_2639 PF01551 Peptidase family M23 LG3211_2641 PF03796 DnaB-like helicase C terminal domain LG3211_2641 PF00772 DnaB-like helicase N terminal domain LG3211_2643 PF03948 Ribosomal protein L9, C-terminal domain LG3211_2643 PF01281 Ribosomal protein L9, N-terminal domain LG3211_2644 PF01084 Ribosomal protein S18 LG3211_2645 PF01250 Ribosomal protein S6 LG3211_2650 PF01521 Iron-sulphur cluster biosynthesis LG3211_2652 PF00152 tRNA synthetases class II (D, K and N) LG3211_2652 PF01336 OB-fold nucleic acid binding domain LG3211_2659 PF01882 Protein of unknown function DUF58 LG3211_2660 PF07726 ATPase family associated with various cellular activities (AAA) LG3211_2660 PF17863 AAA lid domain LG3211_2666 PF00171 Aldehyde dehydrogenase family LG3211_2667 PF00484 Carbonic anhydrase LG3211_2668 PF01042 Endoribonuclease L-PSP LG3211_2669 PF06052 3-hydroxyanthranilic acid dioxygenase LG3211_2671 PF00266 Aminotransferase class-V LG3211_2673 PF01494 FAD binding domain LG3211_2674 PF08411 Exonuclease C-terminal LG3211_2674 PF00929 Exonuclease LG3211_2677 PF12832 MFS_1 like family LG3211_2684 PF00324 Amino acid permease LG3211_2686 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2686 PF03466 LysR substrate binding domain LG3211_2687 PF09297 NADH pyrophosphatase zinc ribbon domain LG3211_2687 PF00293 NUDIX domain LG3211_2688 PF01513 ATP-NAD kinase LG3211_2689 PF05088 Bacterial NAD-glutamate dehydrogenase LG3211_2690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_2690 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_2690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_2691 PF13847 Methyltransferase domain LG3211_2691 PF03551 Transcriptional regulator PadR-like family LG3211_2692 PF02310 B12 binding domain LG3211_2692 PF02607 B12 binding domain LG3211_2692 PF02574 Homocysteine S-methyltransferase LG3211_2692 PF02965 Vitamin B12 dependent methionine synthase, activation domain LG3211_2692 PF00809 Pterin binding enzyme LG3211_2694 PF02607 B12 binding domain LG3211_2694 PF02965 Vitamin B12 dependent methionine synthase, activation domain LG3211_2694 PF00809 Pterin binding enzyme LG3211_2694 PF02310 B12 binding domain LG3211_2694 PF02574 Homocysteine S-methyltransferase LG3211_2697 PF00440 Bacterial regulatory proteins, tetR family LG3211_2701 PF04102 SlyX LG3211_2702 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LG3211_2702 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LG3211_2702 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LG3211_2703 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LG3211_2703 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_2704 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_2704 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LG3211_2705 PF00255 Glutathione peroxidase LG3211_2707 PF00392 Bacterial regulatory proteins, gntR family LG3211_2708 PF00005 ABC transporter LG3211_2712 PF05360 yiaA/B two helix domain LG3211_2714 PF10415 Fumarase C C-terminus LG3211_2714 PF00206 Lyase LG3211_2715 PF08328 Adenylosuccinate lyase C-terminal LG3211_2715 PF00206 Lyase LG3211_2717 PF00753 Metallo-beta-lactamase superfamily LG3211_2719 PF08007 Cupin superfamily protein LG3211_2721 PF16870 2-oxoglutarate dehydrogenase C-terminal LG3211_2721 PF00676 Dehydrogenase E1 component LG3211_2721 PF16078 2-oxoglutarate dehydrogenase N-terminus LG3211_2721 PF02779 Transketolase, pyrimidine binding domain LG3211_2722 PF02817 e3 binding domain LG3211_2722 PF00364 Biotin-requiring enzyme LG3211_2722 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LG3211_2723 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LG3211_2723 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_2724 PF03641 Possible lysine decarboxylase LG3211_2726 PF00107 Zinc-binding dehydrogenase LG3211_2726 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_2727 PF00072 Response regulator receiver domain LG3211_2728 PF01556 DnaJ C terminal domain LG3211_2728 PF00226 DnaJ domain LG3211_2732 PF00962 Adenosine/AMP deaminase LG3211_2734 PF00905 Penicillin binding protein transpeptidase domain LG3211_2734 PF06832 Penicillin-Binding Protein C-terminus Family LG3211_2734 PF00912 Transglycosylase LG3211_2736 PF11974 Bacterial alpha-2-macroglobulin MG3 domain LG3211_2736 PF00207 Alpha-2-macroglobulin family LG3211_2736 PF01835 MG2 domain LG3211_2736 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain LG3211_2736 PF17962 Bacterial macroglobulin domain 6 LG3211_2736 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain LG3211_2736 PF07703 Alpha-2-macroglobulin bait region domain LG3211_2736 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain LG3211_2739 PF03413 Peptidase propeptide and YPEB domain LG3211_2739 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_2739 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_2739 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_2739 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_2741 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_2741 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_2741 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_2741 PF03413 Peptidase propeptide and YPEB domain LG3211_2741 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_2742 PF07237 Protein of unknown function (DUF1428) LG3211_2743 PF07690 Major Facilitator Superfamily LG3211_2744 PF04264 YceI-like domain LG3211_2745 PF03989 DNA gyrase C-terminal domain, beta-propeller LG3211_2745 PF00521 DNA gyrase/topoisomerase IV, subunit A LG3211_2747 PF01008 Initiation factor 2 subunit family LG3211_2750 PF00152 tRNA synthetases class II (D, K and N) LG3211_2751 PF12826 Helix-hairpin-helix motif LG3211_2751 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LG3211_2751 PF03120 NAD-dependent DNA ligase OB-fold domain LG3211_2751 PF01653 NAD-dependent DNA ligase adenylation domain LG3211_2751 PF00533 BRCA1 C Terminus (BRCT) domain LG3211_2752 PF04354 ZipA, C-terminal FtsZ-binding domain LG3211_2753 PF02463 RecF/RecN/SMC N terminal domain LG3211_2755 PF00356 Bacterial regulatory proteins, lacI family LG3211_2758 PF03633 Glycosyl hydrolase family 65, C-terminal domain LG3211_2758 PF03636 Glycosyl hydrolase family 65, N-terminal domain LG3211_2758 PF03632 Glycosyl hydrolase family 65 central catalytic domain LG3211_2761 PF00293 NUDIX domain LG3211_2766 PF00005 ABC transporter LG3211_2766 PF08402 TOBE domain LG3211_2767 PF00232 Glycosyl hydrolase family 1 LG3211_2768 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LG3211_2768 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LG3211_2769 PF02685 Glucokinase LG3211_2770 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LG3211_2773 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_2774 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_2775 PF13416 Bacterial extracellular solute-binding protein LG3211_2778 PF00356 Bacterial regulatory proteins, lacI family LG3211_2779 PF01722 BolA-like protein LG3211_2780 PF03795 YCII-related domain LG3211_2783 PF02616 Segregation and condensation protein ScpA LG3211_2784 PF04079 Segregation and condensation complex subunit ScpB LG3211_2785 PF00849 RNA pseudouridylate synthase LG3211_2785 PF01479 S4 domain LG3211_2786 PF00144 Beta-lactamase LG3211_2788 PF00440 Bacterial regulatory proteins, tetR family LG3211_2790 PF00795 Carbon-nitrogen hydrolase LG3211_2791 PF02534 Type IV secretory system Conjugative DNA transfer LG3211_2796 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LG3211_2796 PF10135 Rod binding protein LG3211_2799 PF08291 Peptidase M15 LG3211_2799 PF01471 Putative peptidoglycan binding domain LG3211_2808 PF03135 CagE, TrbE, VirB family, component of type IV transporter system LG3211_2810 PF05101 Type IV secretory pathway, VirB3-like protein LG3211_2811 PF04956 TrbC/VIRB2 family LG3211_2812 PF01464 Transglycosylase SLT domain LG3211_2814 PF00437 Type II/IV secretion system protein LG3211_2815 PF03743 Bacterial conjugation TrbI-like protein LG3211_2817 PF04335 VirB8 protein LG3211_2819 PF00155 Aminotransferase class I and II LG3211_2821 PF00005 ABC transporter LG3211_2822 PF03379 CcmB protein LG3211_2823 PF01578 Cytochrome C assembly protein LG3211_2825 PF03100 CcmE LG3211_2826 PF01578 Cytochrome C assembly protein LG3211_2826 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal LG3211_2827 PF08534 Redoxin LG3211_2828 PF03918 Cytochrome C biogenesis protein LG3211_2830 PF00561 alpha/beta hydrolase fold LG3211_2833 PF02983 Alpha-lytic protease prodomain LG3211_2833 PF00089 Trypsin LG3211_2838 PF03466 LysR substrate binding domain LG3211_2838 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2845 PF17263 Family of unknown function (DUF5329) LG3211_2847 PF00561 alpha/beta hydrolase fold LG3211_2849 PF01066 CDP-alcohol phosphatidyltransferase LG3211_2850 PF10605 3HB-oligomer hydrolase (3HBOH) LG3211_2851 PF00196 Bacterial regulatory proteins, luxR family LG3211_2851 PF00072 Response regulator receiver domain LG3211_2852 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2852 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2853 PF00593 TonB dependent receptor LG3211_2853 PF07715 TonB-dependent Receptor Plug Domain LG3211_2858 PF04055 Radical SAM superfamily LG3211_2858 PF06969 HemN C-terminal domain LG3211_2864 PF03618 Kinase/pyrophosphorylase LG3211_2865 PF00391 PEP-utilising enzyme, mobile domain LG3211_2865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LG3211_2865 PF02896 PEP-utilising enzyme, TIM barrel domain LG3211_2866 PF00924 Mechanosensitive ion channel LG3211_2866 PF05552 Conserved TM helix LG3211_2868 PF00929 Exonuclease LG3211_2873 PF14437 MafB19-like deaminase LG3211_2875 PF00440 Bacterial regulatory proteins, tetR family LG3211_2878 PF02540 NAD synthase LG3211_2878 PF00958 GMP synthase C terminal domain LG3211_2878 PF00117 Glutamine amidotransferase class-I LG3211_2879 PF00571 CBS domain LG3211_2879 PF00478 IMP dehydrogenase / GMP reductase domain LG3211_2881 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LG3211_2881 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LG3211_2887 PF01817 Chorismate mutase type II LG3211_2888 PF00899 ThiF family LG3211_2889 PF03453 MoeA N-terminal region (domain I and II) LG3211_2889 PF03454 MoeA C-terminal region (domain IV) LG3211_2889 PF00994 Probable molybdopterin binding domain LG3211_2890 PF12804 MobA-like NTP transferase domain LG3211_2891 PF01926 50S ribosome-binding GTPase LG3211_2891 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LG3211_2892 PF13360 PQQ-like domain LG3211_2892 PF01011 PQQ enzyme repeat LG3211_2894 PF13464 Domain of unknown function (DUF4115) LG3211_2896 PF04055 Radical SAM superfamily LG3211_2897 PF00334 Nucleoside diphosphate kinase LG3211_2899 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LG3211_2899 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LG3211_2899 PF00378 Enoyl-CoA hydratase/isomerase LG3211_2900 PF02803 Thiolase, C-terminal domain LG3211_2900 PF00108 Thiolase, N-terminal domain LG3211_2903 PF01588 Putative tRNA binding domain LG3211_2904 PF01266 FAD dependent oxidoreductase LG3211_2906 PF00483 Nucleotidyl transferase LG3211_2907 PF02719 Polysaccharide biosynthesis protein LG3211_2908 PF00953 Glycosyl transferase family 4 LG3211_2909 PF18073 Rubredoxin metal binding domain LG3211_2911 PF00216 Bacterial DNA-binding protein LG3211_2912 PF00575 S1 RNA binding domain LG3211_2913 PF02224 Cytidylate kinase LG3211_2915 PF00444 Ribosomal protein L36 LG3211_2917 PF04371 Porphyromonas-type peptidyl-arginine deiminase LG3211_2919 PF00795 Carbon-nitrogen hydrolase LG3211_2925 PF00873 AcrB/AcrD/AcrF family LG3211_2926 PF00873 AcrB/AcrD/AcrF family LG3211_2927 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_2928 PF00034 Cytochrome c LG3211_2931 PF01106 NifU-like domain LG3211_2932 PF01329 Pterin 4 alpha carbinolamine dehydratase LG3211_2935 PF00849 RNA pseudouridylate synthase LG3211_2935 PF01479 S4 domain LG3211_2937 PF10150 Ribonuclease E/G family LG3211_2937 PF12111 Polyribonucleotide phosphorylase C terminal LG3211_2937 PF00575 S1 RNA binding domain LG3211_2938 PF00196 Bacterial regulatory proteins, luxR family LG3211_2938 PF00072 Response regulator receiver domain LG3211_2941 PF00106 short chain dehydrogenase LG3211_2942 PF12833 Helix-turn-helix domain LG3211_2942 PF06719 AraC-type transcriptional regulator N-terminus LG3211_2943 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2943 PF03466 LysR substrate binding domain LG3211_2944 PF01810 LysE type translocator LG3211_2946 PF07681 DoxX LG3211_2948 PF05114 Protein of unknown function (DUF692) LG3211_2951 PF02566 OsmC-like protein LG3211_2953 PF02683 Cytochrome C biogenesis protein transmembrane region LG3211_2953 PF00578 AhpC/TSA family LG3211_2953 PF17991 Thioredoxin like C-terminal domain LG3211_2954 PF00578 AhpC/TSA family LG3211_2954 PF02683 Cytochrome C biogenesis protein transmembrane region LG3211_2954 PF17991 Thioredoxin like C-terminal domain LG3211_2955 PF00072 Response regulator receiver domain LG3211_2955 PF00486 Transcriptional regulatory protein, C terminal LG3211_2956 PF00512 His Kinase A (phospho-acceptor) domain LG3211_2956 PF00672 HAMP domain LG3211_2956 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_2959 PF12833 Helix-turn-helix domain LG3211_2965 PF03466 LysR substrate binding domain LG3211_2965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2968 PF00005 ABC transporter LG3211_2968 PF13732 Domain of unknown function (DUF4162) LG3211_2975 PF00230 Major intrinsic protein LG3211_2976 PF13276 HTH-like domain LG3211_2976 PF13683 Integrase core domain LG3211_2978 PF01527 Transposase LG3211_2979 PF13276 HTH-like domain LG3211_2979 PF13333 Integrase core domain LG3211_2979 PF00665 Integrase core domain LG3211_2980 PF01527 Transposase LG3211_2982 PF13276 HTH-like domain LG3211_2982 PF13683 Integrase core domain LG3211_2983 PF01527 Transposase LG3211_2985 PF03466 LysR substrate binding domain LG3211_2985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_2986 PF02525 Flavodoxin-like fold LG3211_2987 PF02403 Seryl-tRNA synthetase N-terminal domain LG3211_2987 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LG3211_2990 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LG3211_2991 PF00155 Aminotransferase class I and II LG3211_2992 PF01842 ACT domain LG3211_2992 PF00800 Prephenate dehydratase LG3211_2992 PF01817 Chorismate mutase type II LG3211_2993 PF00266 Aminotransferase class-V LG3211_2994 PF00174 Oxidoreductase molybdopterin binding domain LG3211_2995 PF01794 Ferric reductase like transmembrane component LG3211_2996 PF00498 FHA domain LG3211_3002 PF00106 short chain dehydrogenase LG3211_3004 PF00440 Bacterial regulatory proteins, tetR family LG3211_3010 PF03960 ArsC family LG3211_3011 PF01645 Conserved region in glutamate synthase LG3211_3013 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LG3211_3013 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LG3211_3013 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LG3211_3015 PF05230 MASE2 domain LG3211_3015 PF00990 Diguanylate cyclase, GGDEF domain LG3211_3016 PF00082 Subtilase family LG3211_3016 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3020 PF16363 GDP-mannose 4,6 dehydratase LG3211_3021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_3021 PF03466 LysR substrate binding domain LG3211_3028 PF03280 Proteobacterial lipase chaperone protein LG3211_3029 PF00561 alpha/beta hydrolase fold LG3211_3037 PF01066 CDP-alcohol phosphatidyltransferase LG3211_3038 PF01541 GIY-YIG catalytic domain LG3211_3038 PF02151 UvrB/uvrC motif LG3211_3038 PF08459 UvrC Helix-hairpin-helix N-terminal LG3211_3039 PF01451 Low molecular weight phosphotyrosine protein phosphatase LG3211_3040 PF02348 Cytidylyltransferase LG3211_3041 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LG3211_3042 PF00664 ABC transporter transmembrane region LG3211_3042 PF00005 ABC transporter LG3211_3043 PF02472 Biopolymer transport protein ExbD/TolR LG3211_3044 PF01618 MotA/TolQ/ExbB proton channel family LG3211_3045 PF03772 Competence protein LG3211_3045 PF00753 Metallo-beta-lactamase superfamily LG3211_3046 PF00005 ABC transporter LG3211_3047 PF12704 MacB-like periplasmic core domain LG3211_3047 PF02687 FtsX-like permease family LG3211_3049 PF03937 Flavinator of succinate dehydrogenase LG3211_3052 PF13085 2Fe-2S iron-sulfur cluster binding domain LG3211_3053 PF00890 FAD binding domain LG3211_3053 PF02910 Fumarate reductase flavoprotein C-term LG3211_3054 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LG3211_3055 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit LG3211_3057 PF13537 Glutamine amidotransferase domain LG3211_3057 PF00733 Asparagine synthase LG3211_3058 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LG3211_3058 PF02779 Transketolase, pyrimidine binding domain LG3211_3058 PF02780 Transketolase, C-terminal domain LG3211_3059 PF02798 Glutathione S-transferase, N-terminal domain LG3211_3061 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_3061 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_3061 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_3065 PF01026 TatD related DNase LG3211_3066 PF00899 ThiF family LG3211_3069 PF14521 Lysine-specific metallo-endopeptidase LG3211_3072 PF00313 'Cold-shock' DNA-binding domain LG3211_3074 PF02253 Phospholipase A1 LG3211_3081 PF00005 ABC transporter LG3211_3082 PF07995 Glucose / Sorbosone dehydrogenase LG3211_3083 PF00575 S1 RNA binding domain LG3211_3083 PF09371 Tex-like protein N-terminal domain LG3211_3083 PF17674 HHH domain LG3211_3083 PF16921 Tex protein YqgF-like domain LG3211_3084 PF00970 Oxidoreductase FAD-binding domain LG3211_3084 PF00175 Oxidoreductase NAD-binding domain LG3211_3085 PF08534 Redoxin LG3211_3086 PF04397 LytTr DNA-binding domain LG3211_3086 PF00072 Response regulator receiver domain LG3211_3088 PF00255 Glutathione peroxidase LG3211_3089 PF00593 TonB dependent receptor LG3211_3089 PF07715 TonB-dependent Receptor Plug Domain LG3211_3091 PF01979 Amidohydrolase family LG3211_3093 PF01432 Peptidase family M3 LG3211_3095 PF13018 Extended Signal Peptide of Type V secretion system LG3211_3095 PF03895 YadA-like membrane anchor domain LG3211_3095 PF05662 Coiled stalk of trimeric autotransporter adhesin LG3211_3095 PF05658 Head domain of trimeric autotransporter adhesin LG3211_3096 PF02146 Sir2 family LG3211_3097 PF03009 Glycerophosphoryl diester phosphodiesterase family LG3211_3099 PF13520 Amino acid permease LG3211_3102 PF00849 RNA pseudouridylate synthase LG3211_3102 PF01479 S4 domain LG3211_3107 PF00854 POT family LG3211_3109 PF13417 Glutathione S-transferase, N-terminal domain LG3211_3109 PF00043 Glutathione S-transferase, C-terminal domain LG3211_3123 PF02696 Uncharacterized ACR, YdiU/UPF0061 family LG3211_3124 PF14497 Glutathione S-transferase, C-terminal domain LG3211_3124 PF02798 Glutathione S-transferase, N-terminal domain LG3211_3125 PF07690 Major Facilitator Superfamily LG3211_3126 PF00455 DeoR C terminal sensor domain LG3211_3126 PF08220 DeoR-like helix-turn-helix domain LG3211_3128 PF00270 DEAD/DEAH box helicase LG3211_3128 PF00271 Helicase conserved C-terminal domain LG3211_3128 PF03880 DbpA RNA binding domain LG3211_3129 PF00958 GMP synthase C terminal domain LG3211_3129 PF02540 NAD synthase LG3211_3129 PF00117 Glutamine amidotransferase class-I LG3211_3130 PF00849 RNA pseudouridylate synthase LG3211_3131 PF07152 YaeQ protein LG3211_3133 PF04055 Radical SAM superfamily LG3211_3133 PF00919 Uncharacterized protein family UPF0004 LG3211_3133 PF18693 TRAM domain LG3211_3134 PF01738 Dienelactone hydrolase family LG3211_3136 PF02682 Carboxyltransferase domain, subdomain C and D LG3211_3137 PF02626 Carboxyltransferase domain, subdomain A and B LG3211_3139 PF00069 Protein kinase domain LG3211_3142 PF03746 LamB/YcsF family LG3211_3145 PF01470 Pyroglutamyl peptidase LG3211_3147 PF06271 RDD family LG3211_3148 PF00692 dUTPase LG3211_3150 PF10609 NUBPL iron-transfer P-loop NTPase LG3211_3152 PF07715 TonB-dependent Receptor Plug Domain LG3211_3152 PF00593 TonB dependent receptor LG3211_3154 PF01588 Putative tRNA binding domain LG3211_3154 PF09334 tRNA synthetases class I (M) LG3211_3155 PF04060 Putative Fe-S cluster LG3211_3158 PF08676 MutL C terminal dimerisation domain LG3211_3158 PF01119 DNA mismatch repair protein, C-terminal domain LG3211_3160 PF11741 AMIN domain LG3211_3160 PF01520 N-acetylmuramoyl-L-alanine amidase LG3211_3161 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LG3211_3162 PF03853 YjeF-related protein N-terminus LG3211_3162 PF01256 Carbohydrate kinase LG3211_3163 PF08331 Domain of unknown function (DUF1730) LG3211_3164 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_3165 PF00342 Phosphoglucose isomerase LG3211_3166 PF02261 Aspartate decarboxylase LG3211_3167 PF02569 Pantoate-beta-alanine ligase LG3211_3168 PF02548 Ketopantoate hydroxymethyltransferase LG3211_3169 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LG3211_3170 PF01743 Poly A polymerase head domain LG3211_3170 PF12627 Probable RNA and SrmB- binding site of polymerase A LG3211_3170 PF12626 Polymerase A arginine-rich C-terminus LG3211_3173 PF00037 4Fe-4S binding domain LG3211_3173 PF11953 Domain of unknown function (DUF3470) LG3211_3177 PF00701 Dihydrodipicolinate synthetase family LG3211_3179 PF00578 AhpC/TSA family LG3211_3180 PF13638 PIN domain LG3211_3180 PF02562 PhoH-like protein LG3211_3181 PF08543 Phosphomethylpyrimidine kinase LG3211_3181 PF02581 Thiamine monophosphate synthase LG3211_3185 PF03814 Potassium-transporting ATPase A subunit LG3211_3187 PF02669 K+-transporting ATPase, c chain LG3211_3188 PF13492 GAF domain LG3211_3188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3188 PF13493 Domain of unknown function (DUF4118) LG3211_3188 PF00512 His Kinase A (phospho-acceptor) domain LG3211_3188 PF02702 Osmosensitive K+ channel His kinase sensor domain LG3211_3189 PF00072 Response regulator receiver domain LG3211_3189 PF00486 Transcriptional regulatory protein, C terminal LG3211_3193 PF02599 Global regulator protein family LG3211_3194 PF01411 tRNA synthetases class II (A) LG3211_3194 PF02272 DHHA1 domain LG3211_3194 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LG3211_3195 PF02631 RecX family LG3211_3196 PF00154 recA bacterial DNA recombination protein LG3211_3198 PF01726 LexA DNA binding domain LG3211_3198 PF00717 Peptidase S24-like LG3211_3199 PF01047 MarR family LG3211_3199 PF00583 Acetyltransferase (GNAT) family LG3211_3200 PF02464 Competence-damaged protein LG3211_3203 PF07715 TonB-dependent Receptor Plug Domain LG3211_3203 PF00593 TonB dependent receptor LG3211_3205 PF00491 Arginase family LG3211_3206 PF00175 Oxidoreductase NAD-binding domain LG3211_3206 PF00970 Oxidoreductase FAD-binding domain LG3211_3209 PF08659 KR domain LG3211_3209 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_3209 PF16197 Ketoacyl-synthetase C-terminal extension LG3211_3209 PF00698 Acyl transferase domain LG3211_3209 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_3209 PF14765 Polyketide synthase dehydratase LG3211_3209 PF00550 Phosphopantetheine attachment site LG3211_3210 PF01593 Flavin containing amine oxidoreductase LG3211_3212 PF01593 Flavin containing amine oxidoreductase LG3211_3213 PF00107 Zinc-binding dehydrogenase LG3211_3213 PF16884 N-terminal domain of oxidoreductase LG3211_3214 PF07690 Major Facilitator Superfamily LG3211_3218 PF13520 Amino acid permease LG3211_3219 PF05192 MutS domain III LG3211_3219 PF05190 MutS family domain IV LG3211_3219 PF05188 MutS domain II LG3211_3219 PF01624 MutS domain I LG3211_3219 PF00488 MutS domain V LG3211_3220 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_3220 PF17871 AAA lid domain LG3211_3220 PF07724 AAA domain (Cdc48 subfamily) LG3211_3220 PF02861 Clp amino terminal domain, pathogenicity island component LG3211_3220 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_3221 PF00141 Peroxidase LG3211_3223 PF01479 S4 domain LG3211_3224 PF01554 MatE LG3211_3227 PF01245 Ribosomal protein L19 LG3211_3228 PF01746 tRNA (Guanine-1)-methyltransferase LG3211_3229 PF05239 PRC-barrel domain LG3211_3229 PF01782 RimM N-terminal domain LG3211_3230 PF00886 Ribosomal protein S16 LG3211_3232 PF02978 Signal peptide binding domain LG3211_3232 PF02881 SRP54-type protein, helical bundle domain LG3211_3232 PF00448 SRP54-type protein, GTPase domain LG3211_3233 PF01578 Cytochrome C assembly protein LG3211_3236 PF02321 Outer membrane efflux protein LG3211_3237 PF00529 HlyD membrane-fusion protein of T1SS LG3211_3237 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_3238 PF07690 Major Facilitator Superfamily LG3211_3240 PF00378 Enoyl-CoA hydratase/isomerase LG3211_3240 PF02911 Formyl transferase, C-terminal domain LG3211_3240 PF00551 Formyl transferase LG3211_3245 PF18073 Rubredoxin metal binding domain LG3211_3253 PF02401 LytB protein LG3211_3254 PF01252 Signal peptidase (SPase) II LG3211_3255 PF06827 Zinc finger found in FPG and IleRS LG3211_3255 PF00133 tRNA synthetases class I (I, L, M and V) LG3211_3255 PF08264 Anticodon-binding domain of tRNA LG3211_3256 PF01687 Riboflavin kinase LG3211_3256 PF06574 FAD synthetase LG3211_3257 PF03023 Lipid II flippase MurJ LG3211_3258 PF01649 Ribosomal protein S20 LG3211_3259 PF01018 GTP1/OBG LG3211_3259 PF01926 50S ribosome-binding GTPase LG3211_3260 PF01016 Ribosomal L27 protein LG3211_3261 PF00829 Ribosomal prokaryotic L21 protein LG3211_3263 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3263 PF00082 Subtilase family LG3211_3266 PF17760 UvrA interaction domain LG3211_3266 PF17755 UvrA DNA-binding domain LG3211_3266 PF00005 ABC transporter LG3211_3270 PF00378 Enoyl-CoA hydratase/isomerase LG3211_3272 PF00581 Rhodanese-like domain LG3211_3273 PF00293 NUDIX domain LG3211_3275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LG3211_3275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase LG3211_3276 PF00378 Enoyl-CoA hydratase/isomerase LG3211_3278 PF00633 Helix-hairpin-helix motif LG3211_3278 PF00730 HhH-GPD superfamily base excision DNA repair protein LG3211_3278 PF10576 Iron-sulfur binding domain of endonuclease III LG3211_3279 PF07396 Phosphate-selective porin O and P LG3211_3280 PF12849 PBP superfamily domain LG3211_3281 PF12849 PBP superfamily domain LG3211_3282 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_3283 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_3285 PF00005 ABC transporter LG3211_3286 PF01895 PhoU domain LG3211_3289 PF05114 Protein of unknown function (DUF692) LG3211_3291 PF07681 DoxX LG3211_3292 PF00929 Exonuclease LG3211_3295 PF00893 Small Multidrug Resistance protein LG3211_3296 PF08032 RNA 2'-O ribose methyltransferase substrate binding LG3211_3296 PF00588 SpoU rRNA Methylase family LG3211_3297 PF08206 Ribonuclease B OB domain LG3211_3297 PF08461 Ribonuclease R winged-helix domain LG3211_3297 PF00773 RNB domain LG3211_3297 PF00575 S1 RNA binding domain LG3211_3297 PF17876 Cold shock domain LG3211_3302 PF00999 Sodium/hydrogen exchanger family LG3211_3302 PF02254 TrkA-N domain LG3211_3305 PF00733 Asparagine synthase LG3211_3305 PF13537 Glutamine amidotransferase domain LG3211_3307 PF01804 Penicillin amidase LG3211_3308 PF01546 Peptidase family M20/M25/M40 LG3211_3308 PF07687 Peptidase dimerisation domain LG3211_3309 PF03960 ArsC family LG3211_3311 PF14602 Hexapeptide repeat of succinyl-transferase LG3211_3311 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_3311 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal LG3211_3312 PF01966 HD domain LG3211_3312 PF01909 Nucleotidyltransferase domain LG3211_3312 PF08335 GlnD PII-uridylyltransferase LG3211_3313 PF00557 Metallopeptidase family M24 LG3211_3314 PF00318 Ribosomal protein S2 LG3211_3315 PF00889 Elongation factor TS LG3211_3317 PF00696 Amino acid kinase family LG3211_3321 PF16916 Dimerisation domain of Zinc Transporter LG3211_3321 PF01545 Cation efflux family LG3211_3322 PF01765 Ribosome recycling factor LG3211_3323 PF01255 Putative undecaprenyl diphosphate synthase LG3211_3325 PF13288 DXP reductoisomerase C-terminal domain LG3211_3325 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LG3211_3325 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LG3211_3326 PF17820 PDZ domain LG3211_3326 PF02163 Peptidase family M50 LG3211_3327 PF07244 Surface antigen variable number repeat LG3211_3327 PF01103 Surface antigen LG3211_3328 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LG3211_3328 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_3329 PF07977 FabA-like domain LG3211_3330 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LG3211_3330 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_3332 PF02684 Lipid-A-disaccharide synthetase LG3211_3333 PF01351 Ribonuclease HII LG3211_3336 PF14579 Helix-hairpin-helix motif LG3211_3336 PF02811 PHP domain LG3211_3336 PF07733 Bacterial DNA polymerase III alpha NTPase domain LG3211_3336 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LG3211_3336 PF01336 OB-fold nucleic acid binding domain LG3211_3337 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LG3211_3338 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LG3211_3339 PF11734 TilS substrate C-terminal domain LG3211_3339 PF01171 PP-loop family LG3211_3339 PF09179 TilS substrate binding domain LG3211_3340 PF02609 Exonuclease VII small subunit LG3211_3341 PF00348 Polyprenyl synthetase LG3211_3345 PF01523 Putative modulator of DNA gyrase LG3211_3346 PF04751 Protein of unknown function (DUF615) LG3211_3347 PF01523 Putative modulator of DNA gyrase LG3211_3348 PF13116 Protein of unknown function LG3211_3348 PF13502 AsmA-like C-terminal region LG3211_3349 PF00575 S1 RNA binding domain LG3211_3349 PF10150 Ribonuclease E/G family LG3211_3350 PF02545 Maf-like protein LG3211_3355 PF02590 Predicted SPOUT methyltransferase LG3211_3357 PF05698 Bacterial trigger factor protein (TF) C-terminus LG3211_3361 PF00216 Bacterial DNA-binding protein LG3211_3362 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_3362 PF05362 Lon protease (S16) C-terminal proteolytic domain LG3211_3362 PF02190 ATP-dependent protease La (LON) substrate-binding domain LG3211_3363 PF06689 ClpX C4-type zinc finger LG3211_3363 PF07724 AAA domain (Cdc48 subfamily) LG3211_3363 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_3364 PF00574 Clp protease LG3211_3365 PF05697 Bacterial trigger factor protein (TF) LG3211_3365 PF05698 Bacterial trigger factor protein (TF) C-terminus LG3211_3369 PF00561 alpha/beta hydrolase fold LG3211_3377 PF01467 Cytidylyltransferase-like LG3211_3381 PF00133 tRNA synthetases class I (I, L, M and V) LG3211_3381 PF08264 Anticodon-binding domain of tRNA LG3211_3381 PF13603 Leucyl-tRNA synthetase, Domain 2 LG3211_3392 PF00085 Thioredoxin LG3211_3394 PF00069 Protein kinase domain LG3211_3394 PF03793 PASTA domain LG3211_3398 PF02592 Putative vitamin uptake transporter LG3211_3403 PF01590 GAF domain LG3211_3403 PF00990 Diguanylate cyclase, GGDEF domain LG3211_3403 PF00360 Phytochrome region LG3211_3403 PF00563 EAL domain LG3211_3405 PF01527 Transposase LG3211_3406 PF13333 Integrase core domain LG3211_3406 PF13276 HTH-like domain LG3211_3406 PF00665 Integrase core domain LG3211_3407 PF00271 Helicase conserved C-terminal domain LG3211_3407 PF00270 DEAD/DEAH box helicase LG3211_3411 PF13732 Domain of unknown function (DUF4162) LG3211_3411 PF00005 ABC transporter LG3211_3413 PF06772 Bacterial low temperature requirement A protein (LtrA) LG3211_3415 PF10996 Beta-Casp domain LG3211_3415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LG3211_3415 PF00753 Metallo-beta-lactamase superfamily LG3211_3416 PF05649 Peptidase family M13 LG3211_3416 PF01431 Peptidase family M13 LG3211_3418 PF01431 Peptidase family M13 LG3211_3418 PF05649 Peptidase family M13 LG3211_3430 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_3430 PF17862 AAA+ lid domain LG3211_3430 PF06480 FtsH Extracellular LG3211_3430 PF01434 Peptidase family M41 LG3211_3435 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LG3211_3437 PF01384 Phosphate transporter family LG3211_3440 PF03471 Transporter associated domain LG3211_3440 PF00571 CBS domain LG3211_3440 PF01595 Cyclin M transmembrane N-terminal domain LG3211_3442 PF00990 Diguanylate cyclase, GGDEF domain LG3211_3442 PF13188 PAS domain LG3211_3442 PF03707 Bacterial signalling protein N terminal repeat LG3211_3442 PF00563 EAL domain LG3211_3444 PF00588 SpoU rRNA Methylase family LG3211_3445 PF00459 Inositol monophosphatase family LG3211_3452 PF01209 ubiE/COQ5 methyltransferase family LG3211_3453 PF02355 Protein export membrane protein LG3211_3453 PF07549 SecD/SecF GG Motif LG3211_3454 PF02355 Protein export membrane protein LG3211_3454 PF07549 SecD/SecF GG Motif LG3211_3454 PF13721 SecD export protein N-terminal TM region LG3211_3455 PF02699 Preprotein translocase subunit LG3211_3456 PF01702 Queuine tRNA-ribosyltransferase LG3211_3457 PF02547 Queuosine biosynthesis protein LG3211_3458 PF00196 Bacterial regulatory proteins, luxR family LG3211_3458 PF00072 Response regulator receiver domain LG3211_3459 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3459 PF07730 Histidine kinase LG3211_3464 PF00202 Aminotransferase class-III LG3211_3470 PF00753 Metallo-beta-lactamase superfamily LG3211_3473 PF00037 4Fe-4S binding domain LG3211_3475 PF01467 Cytidylyltransferase-like LG3211_3477 PF02881 SRP54-type protein, helical bundle domain LG3211_3477 PF00448 SRP54-type protein, GTPase domain LG3211_3479 PF14815 NUDIX domain LG3211_3479 PF00633 Helix-hairpin-helix motif LG3211_3479 PF00730 HhH-GPD superfamily base excision DNA repair protein LG3211_3480 PF04362 Bacterial Fe(2+) trafficking LG3211_3483 PF13508 Acetyltransferase (GNAT) domain LG3211_3484 PF09857 Putative toxin of bacterial toxin-antitoxin pair LG3211_3489 PF13579 Glycosyl transferase 4-like domain LG3211_3489 PF00534 Glycosyl transferases group 1 LG3211_3497 PF07690 Major Facilitator Superfamily LG3211_3504 PF02355 Protein export membrane protein LG3211_3504 PF07549 SecD/SecF GG Motif LG3211_3506 PF02705 K+ potassium transporter LG3211_3509 PF04545 Sigma-70, region 4 LG3211_3509 PF04539 Sigma-70 region 3 LG3211_3509 PF04542 Sigma-70 region 2 LG3211_3513 PF00082 Subtilase family LG3211_3516 PF03793 PASTA domain LG3211_3516 PF00069 Protein kinase domain LG3211_3517 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3517 PF07730 Histidine kinase LG3211_3518 PF00196 Bacterial regulatory proteins, luxR family LG3211_3518 PF00072 Response regulator receiver domain LG3211_3520 PF12806 Acetyl-CoA dehydrogenase C-terminal like LG3211_3520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_3520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_3520 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_3524 PF02779 Transketolase, pyrimidine binding domain LG3211_3524 PF02780 Transketolase, C-terminal domain LG3211_3524 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LG3211_3526 PF03929 PepSY-associated TM region LG3211_3531 PF13411 MerR HTH family regulatory protein LG3211_3532 PF00216 Bacterial DNA-binding protein LG3211_3533 PF03147 Ferredoxin-fold anticodon binding domain LG3211_3533 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LG3211_3533 PF01588 Putative tRNA binding domain LG3211_3533 PF03483 B3/4 domain LG3211_3533 PF03484 tRNA synthetase B5 domain LG3211_3534 PF01409 tRNA synthetases class II core domain (F) LG3211_3534 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LG3211_3537 PF00453 Ribosomal protein L20 LG3211_3538 PF01632 Ribosomal protein L35 LG3211_3540 PF05198 Translation initiation factor IF-3, N-terminal domain LG3211_3540 PF00707 Translation initiation factor IF-3, C-terminal domain LG3211_3541 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LG3211_3541 PF02824 TGS domain LG3211_3541 PF03129 Anticodon binding domain LG3211_3541 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LG3211_3543 PF00664 ABC transporter transmembrane region LG3211_3543 PF00005 ABC transporter LG3211_3547 PF17757 UvrB interaction domain LG3211_3547 PF00271 Helicase conserved C-terminal domain LG3211_3547 PF04851 Type III restriction enzyme, res subunit LG3211_3547 PF12344 Ultra-violet resistance protein B LG3211_3547 PF02151 UvrB/uvrC motif LG3211_3548 PF14245 Type IV pilin PilA LG3211_3548 PF07963 Prokaryotic N-terminal methylation motif LG3211_3549 PF05567 Neisseria PilC beta-propeller domain LG3211_3555 PF01527 Transposase LG3211_3556 PF13333 Integrase core domain LG3211_3556 PF13276 HTH-like domain LG3211_3556 PF00665 Integrase core domain LG3211_3570 PF00182 Chitinase class I LG3211_3591 PF03641 Possible lysine decarboxylase LG3211_3591 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases LG3211_3591 PF11892 Domain of unknown function (DUF3412) LG3211_3592 PF00593 TonB dependent receptor LG3211_3593 PF01914 MarC family integral membrane protein LG3211_3595 PF00462 Glutaredoxin LG3211_3596 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain LG3211_3596 PF02777 Iron/manganese superoxide dismutases, C-terminal domain LG3211_3599 PF02222 ATP-grasp domain LG3211_3599 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LG3211_3600 PF00731 AIR carboxylase LG3211_3601 PF03966 Trm112p-like protein LG3211_3602 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LG3211_3602 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LG3211_3604 PF04386 Stringent starvation protein B LG3211_3605 PF00043 Glutathione S-transferase, C-terminal domain LG3211_3605 PF02798 Glutathione S-transferase, N-terminal domain LG3211_3606 PF02167 Cytochrome C1 family LG3211_3607 PF00032 Cytochrome b(C-terminal)/b6/petD LG3211_3607 PF00033 Cytochrome b/b6/petB LG3211_3608 PF00355 Rieske [2Fe-2S] domain LG3211_3608 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal LG3211_3609 PF01464 Transglycosylase SLT domain LG3211_3611 PF01938 TRAM domain LG3211_3611 PF00919 Uncharacterized protein family UPF0004 LG3211_3611 PF04055 Radical SAM superfamily LG3211_3616 PF07969 Amidohydrolase family LG3211_3618 PF00005 ABC transporter LG3211_3620 PF17926 Tetracyclin repressor-like, C-terminal domain LG3211_3620 PF00440 Bacterial regulatory proteins, tetR family LG3211_3622 PF01370 NAD dependent epimerase/dehydratase family LG3211_3623 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LG3211_3623 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LG3211_3626 PF02562 PhoH-like protein LG3211_3627 PF02130 Uncharacterized protein family UPF0054 LG3211_3631 PF05567 Neisseria PilC beta-propeller domain LG3211_3635 PF07963 Prokaryotic N-terminal methylation motif LG3211_3640 PF00571 CBS domain LG3211_3640 PF03471 Transporter associated domain LG3211_3645 PF13722 5TM C-terminal transporter carbon starvation CstA LG3211_3645 PF02554 Carbon starvation protein CstA LG3211_3648 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LG3211_3648 PF07676 WD40-like Beta Propeller Repeat LG3211_3648 PF00326 Prolyl oligopeptidase family LG3211_3649 PF03169 OPT oligopeptide transporter protein LG3211_3651 PF00854 POT family LG3211_3654 PF04321 RmlD substrate binding domain LG3211_3655 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LG3211_3656 PF00483 Nucleotidyl transferase LG3211_3657 PF16363 GDP-mannose 4,6 dehydratase LG3211_3658 PF00578 AhpC/TSA family LG3211_3659 PF02685 Glucokinase LG3211_3660 PF00553 Cellulose binding domain LG3211_3660 PF00150 Cellulase (glycosyl hydrolase family 5) LG3211_3665 PF16363 GDP-mannose 4,6 dehydratase LG3211_3670 PF13439 Glycosyltransferase Family 4 LG3211_3673 PF13439 Glycosyltransferase Family 4 LG3211_3673 PF00534 Glycosyl transferases group 1 LG3211_3675 PF00150 Cellulase (glycosyl hydrolase family 5) LG3211_3678 PF02397 Bacterial sugar transferase LG3211_3679 PF00436 Single-strand binding protein family LG3211_3688 PF00975 Thioesterase domain LG3211_3689 PF00550 Phosphopantetheine attachment site LG3211_3689 PF00668 Condensation domain LG3211_3689 PF00975 Thioesterase domain LG3211_3689 PF00501 AMP-binding enzyme LG3211_3689 PF13193 AMP-binding enzyme C-terminal domain LG3211_3690 PF00501 AMP-binding enzyme LG3211_3690 PF00975 Thioesterase domain LG3211_3690 PF00668 Condensation domain LG3211_3690 PF00550 Phosphopantetheine attachment site LG3211_3690 PF13193 AMP-binding enzyme C-terminal domain LG3211_3691 PF13193 AMP-binding enzyme C-terminal domain LG3211_3691 PF00668 Condensation domain LG3211_3691 PF00550 Phosphopantetheine attachment site LG3211_3691 PF00501 AMP-binding enzyme LG3211_3692 PF00550 Phosphopantetheine attachment site LG3211_3692 PF00501 AMP-binding enzyme LG3211_3692 PF07993 Male sterility protein LG3211_3692 PF13193 AMP-binding enzyme C-terminal domain LG3211_3692 PF00668 Condensation domain LG3211_3694 PF00501 AMP-binding enzyme LG3211_3695 PF01804 Penicillin amidase LG3211_3696 PF00664 ABC transporter transmembrane region LG3211_3696 PF00005 ABC transporter LG3211_3699 PF01527 Transposase LG3211_3700 PF13276 HTH-like domain LG3211_3700 PF13683 Integrase core domain LG3211_3703 PF00348 Polyprenyl synthetase LG3211_3705 PF08245 Mur ligase middle domain LG3211_3705 PF02875 Mur ligase family, glutamate ligase domain LG3211_3707 PF01842 ACT domain LG3211_3707 PF00696 Amino acid kinase family LG3211_3708 PF02567 Phenazine biosynthesis-like protein LG3211_3709 PF01758 Sodium Bile acid symporter family LG3211_3710 PF00596 Class II Aldolase and Adducin N-terminal domain LG3211_3711 PF13545 Crp-like helix-turn-helix domain LG3211_3711 PF00027 Cyclic nucleotide-binding domain LG3211_3715 PF00083 Sugar (and other) transporter LG3211_3716 PF00375 Sodium:dicarboxylate symporter family LG3211_3718 PF00512 His Kinase A (phospho-acceptor) domain LG3211_3718 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3720 PF00072 Response regulator receiver domain LG3211_3720 PF00196 Bacterial regulatory proteins, luxR family LG3211_3721 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LG3211_3721 PF00056 lactate/malate dehydrogenase, NAD binding domain LG3211_3725 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LG3211_3729 PF12706 Beta-lactamase superfamily domain LG3211_3730 PF03070 TENA/THI-4/PQQC family LG3211_3731 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LG3211_3732 PF13186 Iron-sulfur cluster-binding domain LG3211_3732 PF04055 Radical SAM superfamily LG3211_3733 PF01425 Amidase LG3211_3736 PF01474 Class-II DAHP synthetase family LG3211_3737 PF02600 Disulfide bond formation protein DsbB LG3211_3738 PF01196 Ribosomal protein L17 LG3211_3739 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LG3211_3739 PF01000 RNA polymerase Rpb3/RpoA insert domain LG3211_3739 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LG3211_3740 PF01479 S4 domain LG3211_3740 PF00163 Ribosomal protein S4/S9 N-terminal domain LG3211_3741 PF00411 Ribosomal protein S11 LG3211_3742 PF00416 Ribosomal protein S13/S18 LG3211_3743 PF00344 SecY translocase LG3211_3744 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LG3211_3745 PF00327 Ribosomal protein L30p/L7e LG3211_3746 PF03719 Ribosomal protein S5, C-terminal domain LG3211_3746 PF00333 Ribosomal protein S5, N-terminal domain LG3211_3747 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LG3211_3748 PF00347 Ribosomal protein L6 LG3211_3749 PF00410 Ribosomal protein S8 LG3211_3750 PF00253 Ribosomal protein S14p/S29e LG3211_3751 PF00281 Ribosomal protein L5 LG3211_3751 PF00673 ribosomal L5P family C-terminus LG3211_3752 PF00467 KOW motif LG3211_3752 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LG3211_3753 PF00238 Ribosomal protein L14p/L23e LG3211_3754 PF00366 Ribosomal protein S17 LG3211_3755 PF00831 Ribosomal L29 protein LG3211_3756 PF00252 Ribosomal protein L16p/L10e LG3211_3757 PF07650 KH domain LG3211_3757 PF00189 Ribosomal protein S3, C-terminal domain LG3211_3758 PF00237 Ribosomal protein L22p/L17e LG3211_3759 PF00203 Ribosomal protein S19 LG3211_3760 PF03947 Ribosomal Proteins L2, C-terminal domain LG3211_3760 PF00181 Ribosomal Proteins L2, RNA binding domain LG3211_3761 PF00276 Ribosomal protein L23 LG3211_3762 PF00573 Ribosomal protein L4/L1 family LG3211_3763 PF00297 Ribosomal protein L3 LG3211_3764 PF00338 Ribosomal protein S10p/S20e LG3211_3765 PF03143 Elongation factor Tu C-terminal domain LG3211_3765 PF00009 Elongation factor Tu GTP binding domain LG3211_3765 PF03144 Elongation factor Tu domain 2 LG3211_3766 PF00679 Elongation factor G C-terminus LG3211_3766 PF14492 Elongation Factor G, domain II LG3211_3766 PF03764 Elongation factor G, domain IV LG3211_3766 PF00009 Elongation factor Tu GTP binding domain LG3211_3766 PF03144 Elongation factor Tu domain 2 LG3211_3767 PF00177 Ribosomal protein S7p/S5e LG3211_3768 PF00164 Ribosomal protein S12/S23 LG3211_3769 PF04983 RNA polymerase Rpb1, domain 3 LG3211_3769 PF05000 RNA polymerase Rpb1, domain 4 LG3211_3769 PF04997 RNA polymerase Rpb1, domain 1 LG3211_3769 PF04998 RNA polymerase Rpb1, domain 5 LG3211_3769 PF00623 RNA polymerase Rpb1, domain 2 LG3211_3770 PF04563 RNA polymerase beta subunit LG3211_3770 PF04561 RNA polymerase Rpb2, domain 2 LG3211_3770 PF00562 RNA polymerase Rpb2, domain 6 LG3211_3770 PF10385 RNA polymerase beta subunit external 1 domain LG3211_3770 PF04560 RNA polymerase Rpb2, domain 7 LG3211_3770 PF04565 RNA polymerase Rpb2, domain 3 LG3211_3772 PF00542 Ribosomal protein L7/L12 C-terminal domain LG3211_3772 PF16320 Ribosomal protein L7/L12 dimerisation domain LG3211_3773 PF00466 Ribosomal protein L10 LG3211_3774 PF00687 Ribosomal protein L1p/L10e family LG3211_3775 PF00298 Ribosomal protein L11, RNA binding domain LG3211_3775 PF03946 Ribosomal protein L11, N-terminal domain LG3211_3776 PF02357 Transcription termination factor nusG LG3211_3776 PF00467 KOW motif LG3211_3777 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LG3211_3779 PF03143 Elongation factor Tu C-terminal domain LG3211_3779 PF03144 Elongation factor Tu domain 2 LG3211_3779 PF00009 Elongation factor Tu GTP binding domain LG3211_3784 PF01926 50S ribosome-binding GTPase LG3211_3784 PF06071 Protein of unknown function (DUF933) LG3211_3785 PF01195 Peptidyl-tRNA hydrolase LG3211_3786 PF14693 Ribosomal protein TL5, C-terminal domain LG3211_3786 PF01386 Ribosomal L25p family LG3211_3787 PF14572 Phosphoribosyl synthetase-associated domain LG3211_3787 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LG3211_3789 PF00288 GHMP kinases N terminal domain LG3211_3789 PF08544 GHMP kinases C terminal LG3211_3790 PF03550 Outer membrane lipoprotein LolB LG3211_3793 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LG3211_3793 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LG3211_3793 PF01488 Shikimate / quinate 5-dehydrogenase LG3211_3794 PF03462 PCRF domain LG3211_3794 PF00472 RF-1 domain LG3211_3795 PF00583 Acetyltransferase (GNAT) family LG3211_3798 PF00994 Probable molybdopterin binding domain LG3211_3800 PF03976 Polyphosphate kinase 2 (PPK2) LG3211_3804 PF00708 Acylphosphatase LG3211_3805 PF08534 Redoxin LG3211_3806 PF03631 Virulence factor BrkB LG3211_3808 PF03358 NADPH-dependent FMN reductase LG3211_3810 PF17763 Glutaminase/Asparaginase C-terminal domain LG3211_3810 PF00710 Asparaginase, N-terminal LG3211_3812 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3812 PF04389 Peptidase family M28 LG3211_3813 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3813 PF04389 Peptidase family M28 LG3211_3815 PF01483 Proprotein convertase P-domain LG3211_3817 PF01483 Proprotein convertase P-domain LG3211_3819 PF01483 Proprotein convertase P-domain LG3211_3826 PF00440 Bacterial regulatory proteins, tetR family LG3211_3826 PF08359 YsiA-like protein, C-terminal region LG3211_3827 PF00082 Subtilase family LG3211_3827 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3829 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3829 PF00082 Subtilase family LG3211_3832 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_3832 PF00082 Subtilase family LG3211_3833 PF01883 Iron-sulfur cluster assembly protein LG3211_3835 PF00392 Bacterial regulatory proteins, gntR family LG3211_3835 PF00155 Aminotransferase class I and II LG3211_3840 PF07308 Protein of unknown function (DUF1456) LG3211_3841 PF02233 NAD(P) transhydrogenase beta subunit LG3211_3842 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LG3211_3848 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LG3211_3848 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LG3211_3851 PF01367 5'-3' exonuclease, C-terminal SAM fold LG3211_3851 PF00476 DNA polymerase family A LG3211_3851 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LG3211_3852 PF00293 NUDIX domain LG3211_3853 PF16363 GDP-mannose 4,6 dehydratase LG3211_3855 PF13649 Methyltransferase domain LG3211_3856 PF00535 Glycosyl transferase family 2 LG3211_3857 PF00005 ABC transporter LG3211_3858 PF01061 ABC-2 type transporter LG3211_3859 PF00535 Glycosyl transferase family 2 LG3211_3862 PF00561 alpha/beta hydrolase fold LG3211_3863 PF17827 PrmC N-terminal domain LG3211_3863 PF05175 Methyltransferase small domain LG3211_3870 PF02627 Carboxymuconolactone decarboxylase family LG3211_3871 PF00578 AhpC/TSA family LG3211_3872 PF03466 LysR substrate binding domain LG3211_3872 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_3873 PF03992 Antibiotic biosynthesis monooxygenase LG3211_3877 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain LG3211_3877 PF00749 tRNA synthetases class I (E and Q), catalytic domain LG3211_3879 PF18125 RlmM ferredoxin-like domain LG3211_3879 PF01728 FtsJ-like methyltransferase LG3211_3882 PF07690 Major Facilitator Superfamily LG3211_3885 PF01494 FAD binding domain LG3211_3886 PF01494 FAD binding domain LG3211_3888 PF01923 Cobalamin adenosyltransferase LG3211_3889 PF00850 Histone deacetylase domain LG3211_3890 PF01641 SelR domain LG3211_3891 PF04453 LPS transport system D LG3211_3891 PF03968 OstA-like protein LG3211_3892 PF09312 SurA N-terminal domain LG3211_3892 PF00639 PPIC-type PPIASE domain LG3211_3893 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LG3211_3894 PF00398 Ribosomal RNA adenine dimethylase LG3211_3895 PF04379 ApaG domain LG3211_3896 PF00149 Calcineurin-like phosphoesterase LG3211_3897 PF06940 Domain of unknown function (DUF1287) LG3211_3898 PF13193 AMP-binding enzyme C-terminal domain LG3211_3898 PF00501 AMP-binding enzyme LG3211_3899 PF00186 Dihydrofolate reductase LG3211_3901 PF00303 Thymidylate synthase LG3211_3902 PF01790 Prolipoprotein diacylglyceryl transferase LG3211_3905 PF04011 LemA family LG3211_3906 PF03741 Integral membrane protein TerC family LG3211_3907 PF01219 Prokaryotic diacylglycerol kinase LG3211_3909 PF12704 MacB-like periplasmic core domain LG3211_3909 PF02687 FtsX-like permease family LG3211_3909 PF00005 ABC transporter LG3211_3910 PF00005 ABC transporter LG3211_3911 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_3912 PF00512 His Kinase A (phospho-acceptor) domain LG3211_3912 PF08521 Two-component sensor kinase N-terminal LG3211_3912 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3913 PF00486 Transcriptional regulatory protein, C terminal LG3211_3913 PF00072 Response regulator receiver domain LG3211_3918 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LG3211_3919 PF03819 MazG nucleotide pyrophosphohydrolase domain LG3211_3920 PF00459 Inositol monophosphatase family LG3211_3921 PF00293 NUDIX domain LG3211_3922 PF00202 Aminotransferase class-III LG3211_3923 PF04452 RNA methyltransferase LG3211_3926 PF00072 Response regulator receiver domain LG3211_3934 PF02895 Signal transducing histidine kinase, homodimeric domain LG3211_3934 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3934 PF07194 P2 response regulator binding domain LG3211_3934 PF01627 Hpt domain LG3211_3934 PF01584 CheW-like domain LG3211_3935 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term LG3211_3935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LG3211_3936 PF01584 CheW-like domain LG3211_3937 PF00072 Response regulator receiver domain LG3211_3938 PF00072 Response regulator receiver domain LG3211_3939 PF02951 Prokaryotic glutathione synthetase, N-terminal domain LG3211_3939 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain LG3211_3941 PF00034 Cytochrome c LG3211_3941 PF03150 Di-haem cytochrome c peroxidase LG3211_3946 PF00814 Glycoprotease family LG3211_3948 PF13307 Helicase C-terminal domain LG3211_3948 PF04851 Type III restriction enzyme, res subunit LG3211_3950 PF00912 Transglycosylase LG3211_3950 PF00905 Penicillin binding protein transpeptidase domain LG3211_3950 PF14814 Bifunctional transglycosylase second domain LG3211_3951 PF00535 Glycosyl transferase family 2 LG3211_3955 PF04607 Region found in RelA / SpoT proteins LG3211_3955 PF02824 TGS domain LG3211_3955 PF13291 ACT domain LG3211_3959 PF11898 Domain of unknown function (DUF3418) LG3211_3959 PF04408 Helicase associated domain (HA2) LG3211_3959 PF00270 DEAD/DEAH box helicase LG3211_3959 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold LG3211_3959 PF00271 Helicase conserved C-terminal domain LG3211_3960 PF00210 Ferritin-like domain LG3211_3961 PF03466 LysR substrate binding domain LG3211_3961 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_3964 PF00270 DEAD/DEAH box helicase LG3211_3964 PF09382 RQC domain LG3211_3964 PF00570 HRDC domain LG3211_3964 PF00271 Helicase conserved C-terminal domain LG3211_3964 PF16124 RecQ zinc-binding LG3211_3967 PF02567 Phenazine biosynthesis-like protein LG3211_3970 PF01341 Glycosyl hydrolases family 6 LG3211_3971 PF00486 Transcriptional regulatory protein, C terminal LG3211_3971 PF00072 Response regulator receiver domain LG3211_3972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_3972 PF00512 His Kinase A (phospho-acceptor) domain LG3211_3979 PF06508 Queuosine biosynthesis protein QueC LG3211_3981 PF04055 Radical SAM superfamily LG3211_3983 PF00691 OmpA family LG3211_3984 PF07676 WD40-like Beta Propeller Repeat LG3211_3984 PF04052 TolB amino-terminal domain LG3211_3987 PF02472 Biopolymer transport protein ExbD/TolR LG3211_3988 PF01618 MotA/TolQ/ExbB proton channel family LG3211_3989 PF03061 Thioesterase superfamily LG3211_3990 PF05496 Holliday junction DNA helicase RuvB P-loop domain LG3211_3990 PF05491 RuvB C-terminal winged helix domain LG3211_3990 PF17864 RuvB AAA lid domain LG3211_3992 PF02705 K+ potassium transporter LG3211_3993 PF02705 K+ potassium transporter LG3211_3994 PF01330 RuvA N terminal domain LG3211_3994 PF07499 RuvA, C-terminal domain LG3211_3995 PF02075 Crossover junction endodeoxyribonuclease RuvC LG3211_3996 PF01709 Transcriptional regulator LG3211_4004 PF02938 GAD domain LG3211_4004 PF00152 tRNA synthetases class II (D, K and N) LG3211_4004 PF01336 OB-fold nucleic acid binding domain LG3211_4007 PF12848 ABC transporter LG3211_4007 PF00005 ABC transporter LG3211_4008 PF00593 TonB dependent receptor LG3211_4008 PF07715 TonB-dependent Receptor Plug Domain LG3211_4010 PF02254 TrkA-N domain LG3211_4010 PF00999 Sodium/hydrogen exchanger family LG3211_4011 PF04337 Protein of unknown function, DUF480 LG3211_4013 PF02654 Cobalamin-5-phosphate synthase LG3211_4015 PF02277 Phosphoribosyltransferase LG3211_4016 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase LG3211_4017 PF07685 CobB/CobQ-like glutamine amidotransferase domain LG3211_4017 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LG3211_4018 PF00155 Aminotransferase class I and II LG3211_4019 PF03186 CobD/Cbib protein LG3211_4019 PF17113 Regulatory signalling modulator protein AmpE LG3211_4020 PF07685 CobB/CobQ-like glutamine amidotransferase domain LG3211_4020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LG3211_4021 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LG3211_4021 PF12557 Cob(I)alamin adenosyltransferase N terminal LG3211_4024 PF00593 TonB dependent receptor LG3211_4024 PF07715 TonB-dependent Receptor Plug Domain LG3211_4026 PF00593 TonB dependent receptor LG3211_4026 PF07715 TonB-dependent Receptor Plug Domain LG3211_4027 PF13382 Adenine deaminase C-terminal domain LG3211_4027 PF01979 Amidohydrolase family LG3211_4027 PF13382 Adenine deaminase C-terminal domain LG3211_4027 PF01979 Amidohydrolase family LG3211_4028 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_4028 PF02861 Clp amino terminal domain, pathogenicity island component LG3211_4028 PF17871 AAA lid domain LG3211_4028 PF07724 AAA domain (Cdc48 subfamily) LG3211_4028 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_4029 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_4036 PF00849 RNA pseudouridylate synthase LG3211_4037 PF13525 Outer membrane lipoprotein LG3211_4038 PF02540 NAD synthase LG3211_4038 PF00795 Carbon-nitrogen hydrolase LG3211_4041 PF02629 CoA binding domain LG3211_4041 PF00549 CoA-ligase LG3211_4042 PF08442 ATP-grasp domain LG3211_4042 PF00549 CoA-ligase LG3211_4044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4044 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4045 PF02954 Bacterial regulatory protein, Fis family LG3211_4045 PF00158 Sigma-54 interaction domain LG3211_4045 PF00072 Response regulator receiver domain LG3211_4046 PF00114 Pilin (bacterial filament) LG3211_4046 PF07963 Prokaryotic N-terminal methylation motif LG3211_4047 PF07963 Prokaryotic N-terminal methylation motif LG3211_4047 PF00114 Pilin (bacterial filament) LG3211_4053 PF01370 NAD dependent epimerase/dehydratase family LG3211_4054 PF00106 short chain dehydrogenase LG3211_4055 PF01565 FAD binding domain LG3211_4055 PF04030 D-arabinono-1,4-lactone oxidase LG3211_4056 PF01040 UbiA prenyltransferase family LG3211_4059 PF13649 Methyltransferase domain LG3211_4060 PF00535 Glycosyl transferase family 2 LG3211_4061 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LG3211_4061 PF00437 Type II/IV secretion system protein LG3211_4062 PF00482 Type II secretion system (T2SS), protein F LG3211_4063 PF01478 Type IV leader peptidase family LG3211_4063 PF06750 Bacterial Peptidase A24 N-terminal domain LG3211_4064 PF01121 Dephospho-CoA kinase LG3211_4065 PF02581 Thiamine monophosphate synthase LG3211_4066 PF07516 SecA Wing and Scaffold domain LG3211_4066 PF07517 SecA DEAD-like domain LG3211_4066 PF02810 SEC-C motif LG3211_4066 PF01043 SecA preprotein cross-linking domain LG3211_4067 PF01476 LysM domain LG3211_4067 PF01551 Peptidase family M23 LG3211_4067 PF08525 Opacity-associated protein A N-terminal motif LG3211_4070 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LG3211_4071 PF12327 FtsZ family, C-terminal domain LG3211_4071 PF00091 Tubulin/FtsZ family, GTPase domain LG3211_4072 PF02491 SHS2 domain inserted in FTSA LG3211_4073 PF03799 Cell division protein FtsQ LG3211_4073 PF08478 POTRA domain, FtsQ-type LG3211_4074 PF07478 D-ala D-ala ligase C-terminus LG3211_4074 PF01820 D-ala D-ala ligase N-terminus LG3211_4075 PF01225 Mur ligase family, catalytic domain LG3211_4075 PF08245 Mur ligase middle domain LG3211_4075 PF02875 Mur ligase family, glutamate ligase domain LG3211_4077 PF04101 Glycosyltransferase family 28 C-terminal domain LG3211_4077 PF03033 Glycosyltransferase family 28 N-terminal domain LG3211_4078 PF01098 Cell cycle protein LG3211_4079 PF00953 Glycosyl transferase family 4 LG3211_4080 PF08245 Mur ligase middle domain LG3211_4080 PF01225 Mur ligase family, catalytic domain LG3211_4080 PF02875 Mur ligase family, glutamate ligase domain LG3211_4081 PF01225 Mur ligase family, catalytic domain LG3211_4081 PF02875 Mur ligase family, glutamate ligase domain LG3211_4081 PF08245 Mur ligase middle domain LG3211_4082 PF00905 Penicillin binding protein transpeptidase domain LG3211_4082 PF03717 Penicillin-binding Protein dimerisation domain LG3211_4083 PF04999 Cell division protein FtsL LG3211_4084 PF01795 MraW methylase family LG3211_4085 PF02381 MraZ protein, putative antitoxin-like LG3211_4088 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LG3211_4090 PF02021 Uncharacterised protein family UPF0102 LG3211_4091 PF04307 LexA-binding, inner membrane-associated putative hydrolase LG3211_4092 PF01565 FAD binding domain LG3211_4092 PF02913 FAD linked oxidases, C-terminal domain LG3211_4094 PF00586 AIR synthase related protein, N-terminal domain LG3211_4094 PF02769 AIR synthase related protein, C-terminal domain LG3211_4095 PF01029 NusB family LG3211_4096 PF00885 6,7-dimethyl-8-ribityllumazine synthase LG3211_4097 PF00925 GTP cyclohydrolase II LG3211_4097 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LG3211_4098 PF00677 Lumazine binding domain LG3211_4100 PF01872 RibD C-terminal domain LG3211_4100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LG3211_4102 PF03477 ATP cone domain LG3211_4103 PF00464 Serine hydroxymethyltransferase LG3211_4106 PF12848 ABC transporter LG3211_4106 PF00005 ABC transporter LG3211_4108 PF00557 Metallopeptidase family M24 LG3211_4109 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LG3211_4112 PF12706 Beta-lactamase superfamily domain LG3211_4115 PF03958 Bacterial type II/III secretion system short domain LG3211_4115 PF00263 Bacterial type II and III secretion system protein LG3211_4117 PF10741 Type II secretion system (T2SS), protein M subtype b LG3211_4118 PF05137 Fimbrial assembly protein (PilN) LG3211_4119 PF03934 Type II secretion system (T2SS), protein K LG3211_4121 PF07963 Prokaryotic N-terminal methylation motif LG3211_4122 PF12019 Type II transport protein GspH LG3211_4123 PF08334 Type II secretion system (T2SS), protein G LG3211_4124 PF00482 Type II secretion system (T2SS), protein F LG3211_4126 PF00437 Type II/IV secretion system protein LG3211_4126 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LG3211_4127 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LG3211_4127 PF02769 AIR synthase related protein, C-terminal domain LG3211_4127 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal LG3211_4128 PF10411 Disulfide bond isomerase protein N-terminus LG3211_4128 PF13098 Thioredoxin-like domain LG3211_4129 PF02899 Phage integrase, N-terminal SAM-like domain LG3211_4129 PF00589 Phage integrase family LG3211_4134 PF02789 Cytosol aminopeptidase family, N-terminal domain LG3211_4134 PF00883 Cytosol aminopeptidase family, catalytic domain LG3211_4137 PF08264 Anticodon-binding domain of tRNA LG3211_4137 PF10458 Valyl tRNA synthetase tRNA binding arm LG3211_4137 PF00133 tRNA synthetases class I (I, L, M and V) LG3211_4139 PF00199 Catalase LG3211_4139 PF06628 Catalase-related immune-responsive LG3211_4144 PF01066 CDP-alcohol phosphatidyltransferase LG3211_4146 PF04073 Aminoacyl-tRNA editing domain LG3211_4146 PF03129 Anticodon binding domain LG3211_4146 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LG3211_4147 PF00816 H-NS histone family LG3211_4149 PF02405 Permease MlaE LG3211_4151 PF00005 ABC transporter LG3211_4153 PF02470 MlaD protein LG3211_4153 PF03886 ABC-type transport auxiliary lipoprotein component LG3211_4161 PF01144 Coenzyme A transferase LG3211_4162 PF01144 Coenzyme A transferase LG3211_4164 PF01050 Mannose-6-phosphate isomerase LG3211_4164 PF00483 Nucleotidyl transferase LG3211_4166 PF01012 Electron transfer flavoprotein domain LG3211_4167 PF00766 Electron transfer flavoprotein FAD-binding domain LG3211_4167 PF01012 Electron transfer flavoprotein domain LG3211_4170 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LG3211_4171 PF00535 Glycosyl transferase family 2 LG3211_4174 PF00293 NUDIX domain LG3211_4177 PF02719 Polysaccharide biosynthesis protein LG3211_4178 PF00535 Glycosyl transferase family 2 LG3211_4179 PF16363 GDP-mannose 4,6 dehydratase LG3211_4180 PF00483 Nucleotidyl transferase LG3211_4182 PF08241 Methyltransferase domain LG3211_4184 PF16363 GDP-mannose 4,6 dehydratase LG3211_4185 PF16363 GDP-mannose 4,6 dehydratase LG3211_4187 PF00005 ABC transporter LG3211_4190 PF01053 Cys/Met metabolism PLP-dependent enzyme LG3211_4191 PF00291 Pyridoxal-phosphate dependent enzyme LG3211_4191 PF00571 CBS domain LG3211_4196 PF00437 Type II/IV secretion system protein LG3211_4197 PF02798 Glutathione S-transferase, N-terminal domain LG3211_4197 PF14497 Glutathione S-transferase, C-terminal domain LG3211_4201 PF00069 Protein kinase domain LG3211_4201 PF03793 PASTA domain LG3211_4203 PF00583 Acetyltransferase (GNAT) family LG3211_4205 PF00380 Ribosomal protein S9/S16 LG3211_4206 PF00572 Ribosomal protein L13 LG3211_4208 PF03232 Ubiquinone biosynthesis protein COQ7 LG3211_4209 PF02675 S-adenosylmethionine decarboxylase LG3211_4210 PF00027 Cyclic nucleotide-binding domain LG3211_4210 PF00325 Bacterial regulatory proteins, crp family LG3211_4211 PF00583 Acetyltransferase (GNAT) family LG3211_4213 PF00218 Indole-3-glycerol phosphate synthase LG3211_4214 PF02875 Mur ligase family, glutamate ligase domain LG3211_4214 PF08443 RimK-like ATP-grasp domain LG3211_4214 PF08245 Mur ligase middle domain LG3211_4216 PF03575 Peptidase family S51 LG3211_4217 PF01979 Amidohydrolase family LG3211_4218 PF03992 Antibiotic biosynthesis monooxygenase LG3211_4219 PF02885 Glycosyl transferase family, helical bundle domain LG3211_4219 PF00591 Glycosyl transferase family, a/b domain LG3211_4220 PF00117 Glutamine amidotransferase class-I LG3211_4221 PF00672 HAMP domain LG3211_4221 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4221 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4222 PF00072 Response regulator receiver domain LG3211_4222 PF00486 Transcriptional regulatory protein, C terminal LG3211_4224 PF00425 chorismate binding enzyme LG3211_4224 PF04715 Anthranilate synthase component I, N terminal region LG3211_4226 PF00781 Diacylglycerol kinase catalytic domain LG3211_4227 PF03737 Aldolase/RraA LG3211_4228 PF00834 Ribulose-phosphate 3 epimerase family LG3211_4229 PF00226 DnaJ domain LG3211_4229 PF01556 DnaJ C terminal domain LG3211_4229 PF00684 DnaJ central domain LG3211_4230 PF01259 SAICAR synthetase LG3211_4231 PF00893 Small Multidrug Resistance protein LG3211_4236 PF06965 Na+/H+ antiporter 1 LG3211_4237 PF01699 Sodium/calcium exchanger protein LG3211_4239 PF04209 homogentisate 1,2-dioxygenase LG3211_4241 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_4244 PF00854 POT family LG3211_4245 PF03301 Tryptophan 2,3-dioxygenase LG3211_4247 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_4247 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_4247 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_4247 PF03413 Peptidase propeptide and YPEB domain LG3211_4247 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_4249 PF02780 Transketolase, C-terminal domain LG3211_4249 PF02779 Transketolase, pyrimidine binding domain LG3211_4249 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LG3211_4250 PF02780 Transketolase, C-terminal domain LG3211_4250 PF02779 Transketolase, pyrimidine binding domain LG3211_4252 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LG3211_4252 PF02817 e3 binding domain LG3211_4252 PF00364 Biotin-requiring enzyme LG3211_4257 PF00753 Metallo-beta-lactamase superfamily LG3211_4259 PF00579 tRNA synthetases class I (W and Y) LG3211_4261 PF05532 CsbD-like LG3211_4264 PF00491 Arginase family LG3211_4268 PF03309 Type III pantothenate kinase LG3211_4269 PF02237 Biotin protein ligase C terminal domain LG3211_4269 PF03099 Biotin/lipoate A/B protein ligase family LG3211_4269 PF08279 HTH domain LG3211_4270 PF02660 Glycerol-3-phosphate acyltransferase LG3211_4271 PF02645 Uncharacterised protein, DegV family COG1307 LG3211_4273 PF06167 Glucose-regulated metallo-peptidase M90 LG3211_4274 PF00989 PAS fold LG3211_4274 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain LG3211_4274 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4274 PF17203 Single cache domain 3 LG3211_4275 PF00486 Transcriptional regulatory protein, C terminal LG3211_4275 PF00072 Response regulator receiver domain LG3211_4278 PF01207 Dihydrouridine synthase (Dus) LG3211_4286 PF01137 RNA 3'-terminal phosphate cyclase LG3211_4286 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain LG3211_4287 PF01139 tRNA-splicing ligase RtcB LG3211_4289 PF00158 Sigma-54 interaction domain LG3211_4289 PF06956 Regulator of RNA terminal phosphate cyclase LG3211_4290 PF00905 Penicillin binding protein transpeptidase domain LG3211_4291 PF00664 ABC transporter transmembrane region LG3211_4291 PF00005 ABC transporter LG3211_4293 PF00814 Glycoprotease family LG3211_4293 PF00583 Acetyltransferase (GNAT) family LG3211_4305 PF07995 Glucose / Sorbosone dehydrogenase LG3211_4306 PF01464 Transglycosylase SLT domain LG3211_4308 PF13520 Amino acid permease LG3211_4310 PF01510 N-acetylmuramoyl-L-alanine amidase LG3211_4319 PF01270 Glycosyl hydrolases family 8 LG3211_4322 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LG3211_4322 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LG3211_4324 PF03795 YCII-related domain LG3211_4326 PF00248 Aldo/keto reductase family LG3211_4331 PF01965 DJ-1/PfpI family LG3211_4332 PF00561 alpha/beta hydrolase fold LG3211_4335 PF01979 Amidohydrolase family LG3211_4335 PF13382 Adenine deaminase C-terminal domain LG3211_4336 PF02146 Sir2 family LG3211_4342 PF04116 Fatty acid hydroxylase superfamily LG3211_4345 PF01037 Lrp/AsnC ligand binding domain LG3211_4347 PF03466 LysR substrate binding domain LG3211_4347 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4349 PF00487 Fatty acid desaturase LG3211_4351 PF00440 Bacterial regulatory proteins, tetR family LG3211_4357 PF00245 Alkaline phosphatase LG3211_4360 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding LG3211_4368 PF12102 Domain of unknown function (DUF3578) LG3211_4368 PF07728 AAA domain (dynein-related subfamily) LG3211_4369 PF03466 LysR substrate binding domain LG3211_4369 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4371 PF07690 Major Facilitator Superfamily LG3211_4378 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LG3211_4378 PF02770 Acyl-CoA dehydrogenase, middle domain LG3211_4378 PF12806 Acetyl-CoA dehydrogenase C-terminal like LG3211_4378 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LG3211_4382 PF00873 AcrB/AcrD/AcrF family LG3211_4383 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_4383 PF00529 HlyD membrane-fusion protein of T1SS LG3211_4384 PF01757 Acyltransferase family LG3211_4386 PF03062 MBOAT, membrane-bound O-acyltransferase family LG3211_4388 PF01494 FAD binding domain LG3211_4390 PF07690 Major Facilitator Superfamily LG3211_4391 PF00668 Condensation domain LG3211_4391 PF00975 Thioesterase domain LG3211_4391 PF00550 Phosphopantetheine attachment site LG3211_4391 PF13193 AMP-binding enzyme C-terminal domain LG3211_4391 PF00501 AMP-binding enzyme LG3211_4398 PF07715 TonB-dependent Receptor Plug Domain LG3211_4398 PF07660 Secretin and TonB N terminus short domain LG3211_4398 PF00593 TonB dependent receptor LG3211_4404 PF00595 PDZ domain LG3211_4404 PF13180 PDZ domain LG3211_4409 PF01594 AI-2E family transporter LG3211_4411 PF13419 Haloacid dehalogenase-like hydrolase LG3211_4412 PF02789 Cytosol aminopeptidase family, N-terminal domain LG3211_4412 PF00883 Cytosol aminopeptidase family, catalytic domain LG3211_4418 PF13533 Biotin-lipoyl like LG3211_4419 PF00005 ABC transporter LG3211_4420 PF12704 MacB-like periplasmic core domain LG3211_4420 PF02687 FtsX-like permease family LG3211_4420 PF00005 ABC transporter LG3211_4424 PF00892 EamA-like transporter family LG3211_4425 PF00892 EamA-like transporter family LG3211_4427 PF01037 Lrp/AsnC ligand binding domain LG3211_4428 PF12833 Helix-turn-helix domain LG3211_4428 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LG3211_4428 PF02805 Metal binding domain of Ada LG3211_4428 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LG3211_4429 PF11818 C-terminal domain of tail specific protease (DUF3340) LG3211_4429 PF00595 PDZ domain LG3211_4429 PF03572 Peptidase family S41 LG3211_4429 PF17804 Tail specific protease N-terminal domain LG3211_4430 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family LG3211_4430 PF04055 Radical SAM superfamily LG3211_4431 PF03099 Biotin/lipoate A/B protein ligase family LG3211_4432 PF04359 Protein of unknown function (DUF493) LG3211_4438 PF00768 D-alanyl-D-alanine carboxypeptidase LG3211_4438 PF07943 Penicillin-binding protein 5, C-terminal domain LG3211_4439 PF03330 Lytic transglycolase LG3211_4439 PF05036 Sporulation related domain LG3211_4440 PF13406 Transglycosylase SLT domain LG3211_4442 PF06445 GyrI-like small molecule binding domain LG3211_4442 PF12833 Helix-turn-helix domain LG3211_4444 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase LG3211_4444 PF07055 Enoyl reductase FAD binding domain LG3211_4444 PF12241 Trans-2-enoyl-CoA reductase catalytic region LG3211_4445 PF03413 Peptidase propeptide and YPEB domain LG3211_4445 PF04151 Bacterial pre-peptidase C-terminal domain LG3211_4445 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_4445 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_4445 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_4456 PF00753 Metallo-beta-lactamase superfamily LG3211_4456 PF16123 Hydroxyacylglutathione hydrolase C-terminus LG3211_4459 PF01098 Cell cycle protein LG3211_4460 PF00905 Penicillin binding protein transpeptidase domain LG3211_4460 PF03717 Penicillin-binding Protein dimerisation domain LG3211_4461 PF04093 rod shape-determining protein MreD LG3211_4462 PF04085 rod shape-determining protein MreC LG3211_4465 PF00294 pfkB family carbohydrate kinase LG3211_4469 PF01433 Peptidase family M1 domain LG3211_4469 PF11838 ERAP1-like C-terminal domain LG3211_4472 PF01209 ubiE/COQ5 methyltransferase family LG3211_4473 PF13673 Acetyltransferase (GNAT) domain LG3211_4475 PF13673 Acetyltransferase (GNAT) domain LG3211_4475 PF04229 GrpB protein LG3211_4478 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_4478 PF07724 AAA domain (Cdc48 subfamily) LG3211_4478 PF10431 C-terminal, D2-small domain, of ClpB protein LG3211_4479 PF00227 Proteasome subunit LG3211_4480 PF00589 Phage integrase family LG3211_4480 PF02899 Phage integrase, N-terminal SAM-like domain LG3211_4482 PF01678 Diaminopimelate epimerase LG3211_4484 PF04304 Protein of unknown function (DUF454) LG3211_4485 PF00326 Prolyl oligopeptidase family LG3211_4485 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LG3211_4486 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain LG3211_4486 PF00326 Prolyl oligopeptidase family LG3211_4489 PF01734 Patatin-like phospholipase LG3211_4493 PF00384 Molybdopterin oxidoreductase LG3211_4493 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LG3211_4493 PF01568 Molydopterin dinucleotide binding domain LG3211_4495 PF13247 4Fe-4S dicluster domain LG3211_4495 PF12800 4Fe-4S binding domain LG3211_4496 PF04976 DMSO reductase anchor subunit (DmsC) LG3211_4498 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LG3211_4498 PF03900 Porphobilinogen deaminase, C-terminal domain LG3211_4499 PF04397 LytTr DNA-binding domain LG3211_4499 PF00072 Response regulator receiver domain LG3211_4500 PF06580 Histidine kinase LG3211_4500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4506 PF00873 AcrB/AcrD/AcrF family LG3211_4507 PF01545 Cation efflux family LG3211_4509 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase LG3211_4510 PF01799 [2Fe-2S] binding domain LG3211_4510 PF00111 2Fe-2S iron-sulfur cluster binding domain LG3211_4511 PF13478 XdhC Rossmann domain LG3211_4511 PF02625 XdhC and CoxI family LG3211_4514 PF03466 LysR substrate binding domain LG3211_4514 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4515 PF02627 Carboxymuconolactone decarboxylase family LG3211_4516 PF04072 Leucine carboxyl methyltransferase LG3211_4518 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LG3211_4521 PF03797 Autotransporter beta-domain LG3211_4521 PF12951 Passenger-associated-transport-repeat LG3211_4521 PF00082 Subtilase family LG3211_4522 PF00072 Response regulator receiver domain LG3211_4522 PF00196 Bacterial regulatory proteins, luxR family LG3211_4523 PF00672 HAMP domain LG3211_4523 PF07730 Histidine kinase LG3211_4523 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4524 PF04235 Protein of unknown function (DUF418) LG3211_4527 PF00664 ABC transporter transmembrane region LG3211_4527 PF03412 Peptidase C39 family LG3211_4527 PF00005 ABC transporter LG3211_4534 PF00593 TonB dependent receptor LG3211_4534 PF07715 TonB-dependent Receptor Plug Domain LG3211_4537 PF02566 OsmC-like protein LG3211_4538 PF01047 MarR family LG3211_4540 PF00144 Beta-lactamase LG3211_4540 PF11954 Domain of unknown function (DUF3471) LG3211_4542 PF00144 Beta-lactamase LG3211_4543 PF00593 TonB dependent receptor LG3211_4546 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LG3211_4546 PF13378 Enolase C-terminal domain-like LG3211_4547 PF01418 Helix-turn-helix domain, rpiR family LG3211_4547 PF01380 SIS domain LG3211_4551 PF00557 Metallopeptidase family M24 LG3211_4551 PF01321 Creatinase/Prolidase N-terminal domain LG3211_4552 PF00171 Aldehyde dehydrogenase family LG3211_4553 PF00701 Dihydrodipicolinate synthetase family LG3211_4554 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_4554 PF17806 Sarcosine oxidase A3 domain LG3211_4556 PF01266 FAD dependent oxidoreductase LG3211_4557 PF05544 Proline racemase LG3211_4562 PF00593 TonB dependent receptor LG3211_4562 PF07715 TonB-dependent Receptor Plug Domain LG3211_4564 PF17137 Domain of unknown function (DUF5110) LG3211_4564 PF16338 Domain of unknown function (DUF4968) LG3211_4564 PF01055 Glycosyl hydrolases family 31 LG3211_4564 PF13802 Galactose mutarotase-like LG3211_4566 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LG3211_4567 PF01042 Endoribonuclease L-PSP LG3211_4571 PF01418 Helix-turn-helix domain, rpiR family LG3211_4571 PF01380 SIS domain LG3211_4572 PF07969 Amidohydrolase family LG3211_4573 PF05035 2-keto-3-deoxy-galactonokinase LG3211_4574 PF01081 KDPG and KHG aldolase LG3211_4579 PF01313 Bacterial export proteins, family 3 LG3211_4581 PF01312 FlhB HrpN YscU SpaS Family LG3211_4582 PF00771 FHIPEP family LG3211_4583 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LG3211_4583 PF00460 Flagella basal body rod protein LG3211_4584 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LG3211_4584 PF00460 Flagella basal body rod protein LG3211_4586 PF02107 Flagellar L-ring protein LG3211_4587 PF02119 Flagellar P-ring protein LG3211_4589 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LG3211_4589 PF00460 Flagella basal body rod protein LG3211_4590 PF02049 Flagellar hook-basal body complex protein FliE LG3211_4591 PF01514 Secretory protein of YscJ/FliF family LG3211_4591 PF08345 Flagellar M-ring protein C-terminal LG3211_4594 PF18269 T3SS EscN ATPase C-terminal domain LG3211_4594 PF02874 ATP synthase alpha/beta family, beta-barrel domain LG3211_4594 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LG3211_4597 PF03963 Flagellar hook capping protein - N-terminal region LG3211_4598 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LG3211_4598 PF07559 Flagellar basal body protein FlaE LG3211_4598 PF00460 Flagella basal body rod protein LG3211_4600 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LG3211_4600 PF04509 CheC-like family LG3211_4602 PF00813 FliP family LG3211_4605 PF01464 Transglycosylase SLT domain LG3211_4608 PF00392 Bacterial regulatory proteins, gntR family LG3211_4608 PF00155 Aminotransferase class I and II LG3211_4609 PF00990 Diguanylate cyclase, GGDEF domain LG3211_4610 PF01266 FAD dependent oxidoreductase LG3211_4613 PF12146 Serine aminopeptidase, S33 LG3211_4614 PF03466 LysR substrate binding domain LG3211_4614 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4618 PF00294 pfkB family carbohydrate kinase LG3211_4621 PF03480 Bacterial extracellular solute-binding protein, family 7 LG3211_4623 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component LG3211_4624 PF00356 Bacterial regulatory proteins, lacI family LG3211_4626 PF04962 KduI/IolB family LG3211_4628 PF02563 Polysaccharide biosynthesis/export protein LG3211_4628 PF18412 Outer-membrane lipoprotein Wza C-terminal domain LG3211_4628 PF10531 SLBB domain LG3211_4630 PF02706 Chain length determinant protein LG3211_4630 PF13807 G-rich domain on putative tyrosine kinase LG3211_4630 PF13614 AAA domain LG3211_4633 PF02350 UDP-N-acetylglucosamine 2-epimerase LG3211_4634 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LG3211_4634 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LG3211_4634 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LG3211_4637 PF14602 Hexapeptide repeat of succinyl-transferase LG3211_4637 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_4637 PF12804 MobA-like NTP transferase domain LG3211_4640 PF00107 Zinc-binding dehydrogenase LG3211_4640 PF08240 Alcohol dehydrogenase GroES-like domain LG3211_4644 PF01380 SIS domain LG3211_4645 PF16347 Domain of unknown function (DUF4976) LG3211_4645 PF00884 Sulfatase LG3211_4647 PF07238 PilZ domain LG3211_4647 PF00069 Protein kinase domain LG3211_4651 PF12697 Alpha/beta hydrolase family LG3211_4652 PF00593 TonB dependent receptor LG3211_4652 PF07715 TonB-dependent Receptor Plug Domain LG3211_4657 PF03583 Secretory lipase LG3211_4660 PF08338 Domain of unknown function (DUF1731) LG3211_4660 PF01370 NAD dependent epimerase/dehydratase family LG3211_4662 PF01479 S4 domain LG3211_4662 PF00849 RNA pseudouridylate synthase LG3211_4664 PF00561 alpha/beta hydrolase fold LG3211_4666 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4666 PF03466 LysR substrate binding domain LG3211_4668 PF07689 KaiB domain LG3211_4668 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4668 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4673 PF01011 PQQ enzyme repeat LG3211_4674 PF07690 Major Facilitator Superfamily LG3211_4675 PF08021 Siderophore-interacting FAD-binding domain LG3211_4675 PF04954 Siderophore-interacting protein LG3211_4676 PF03551 Transcriptional regulator PadR-like family LG3211_4677 PF03466 LysR substrate binding domain LG3211_4677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4678 PF17954 Quercetinase C-terminal cupin domain LG3211_4678 PF02678 Pirin LG3211_4680 PF03466 LysR substrate binding domain LG3211_4680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4682 PF12852 Cupin LG3211_4682 PF12833 Helix-turn-helix domain LG3211_4683 PF00561 alpha/beta hydrolase fold LG3211_4684 PF03466 LysR substrate binding domain LG3211_4684 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4694 PF09383 NIL domain LG3211_4694 PF00005 ABC transporter LG3211_4695 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_4696 PF03180 NLPA lipoprotein LG3211_4703 PF00691 OmpA family LG3211_4708 PF02687 FtsX-like permease family LG3211_4708 PF12704 MacB-like periplasmic core domain LG3211_4709 PF02687 FtsX-like permease family LG3211_4709 PF12704 MacB-like periplasmic core domain LG3211_4710 PF00005 ABC transporter LG3211_4711 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LG3211_4712 PF00005 ABC transporter LG3211_4723 PF05649 Peptidase family M13 LG3211_4723 PF01431 Peptidase family M13 LG3211_4725 PF00999 Sodium/hydrogen exchanger family LG3211_4736 PF00440 Bacterial regulatory proteins, tetR family LG3211_4738 PF01389 OmpA-like transmembrane domain LG3211_4738 PF00691 OmpA family LG3211_4739 PF13018 Extended Signal Peptide of Type V secretion system LG3211_4739 PF05662 Coiled stalk of trimeric autotransporter adhesin LG3211_4739 PF05658 Head domain of trimeric autotransporter adhesin LG3211_4739 PF03895 YadA-like membrane anchor domain LG3211_4739 PF03895 YadA-like membrane anchor domain LG3211_4739 PF05658 Head domain of trimeric autotransporter adhesin LG3211_4739 PF05662 Coiled stalk of trimeric autotransporter adhesin LG3211_4739 PF13018 Extended Signal Peptide of Type V secretion system LG3211_4742 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4742 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4743 PF00486 Transcriptional regulatory protein, C terminal LG3211_4743 PF00072 Response regulator receiver domain LG3211_4747 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4747 PF03466 LysR substrate binding domain LG3211_4750 PF00425 chorismate binding enzyme LG3211_4752 PF00691 OmpA family LG3211_4752 PF01389 OmpA-like transmembrane domain LG3211_4756 PF00356 Bacterial regulatory proteins, lacI family LG3211_4757 PF00593 TonB dependent receptor LG3211_4757 PF07715 TonB-dependent Receptor Plug Domain LG3211_4758 PF14310 Fibronectin type III-like domain LG3211_4758 PF00933 Glycosyl hydrolase family 3 N terminal domain LG3211_4758 PF01915 Glycosyl hydrolase family 3 C-terminal domain LG3211_4759 PF00356 Bacterial regulatory proteins, lacI family LG3211_4761 PF03825 Nucleoside H+ symporter LG3211_4762 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LG3211_4762 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LG3211_4767 PF05199 GMC oxidoreductase LG3211_4767 PF00732 GMC oxidoreductase LG3211_4770 PF00704 Glycosyl hydrolases family 18 LG3211_4770 PF00041 Fibronectin type III domain LG3211_4779 PF00873 AcrB/AcrD/AcrF family LG3211_4780 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_4782 PF01434 Peptidase family M41 LG3211_4782 PF00004 ATPase family associated with various cellular activities (AAA) LG3211_4782 PF17862 AAA+ lid domain LG3211_4805 PF01229 Glycosyl hydrolases family 39 LG3211_4806 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation LG3211_4806 PF14508 Glycosyl-hydrolase 97 N-terminal LG3211_4806 PF10566 Glycoside hydrolase 97 LG3211_4807 PF17137 Domain of unknown function (DUF5110) LG3211_4807 PF01055 Glycosyl hydrolases family 31 LG3211_4807 PF16338 Domain of unknown function (DUF4968) LG3211_4809 PF00665 Integrase core domain LG3211_4809 PF13333 Integrase core domain LG3211_4809 PF13276 HTH-like domain LG3211_4810 PF01527 Transposase LG3211_4812 PF07786 Protein of unknown function (DUF1624) LG3211_4812 PF04235 Protein of unknown function (DUF418) LG3211_4815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4815 PF06580 Histidine kinase LG3211_4816 PF00072 Response regulator receiver domain LG3211_4816 PF04397 LytTr DNA-binding domain LG3211_4825 PF07715 TonB-dependent Receptor Plug Domain LG3211_4825 PF00593 TonB dependent receptor LG3211_4831 PF00510 Cytochrome c oxidase subunit III LG3211_4832 PF00115 Cytochrome C and Quinol oxidase polypeptide I LG3211_4833 PF06481 COX Aromatic Rich Motif LG3211_4833 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LG3211_4835 PF13533 Biotin-lipoyl like LG3211_4838 PF07715 TonB-dependent Receptor Plug Domain LG3211_4838 PF00593 TonB dependent receptor LG3211_4840 PF02322 Cytochrome bd terminal oxidase subunit II LG3211_4841 PF13360 PQQ-like domain LG3211_4842 PF01914 MarC family integral membrane protein LG3211_4844 PF13186 Iron-sulfur cluster-binding domain LG3211_4844 PF04055 Radical SAM superfamily LG3211_4845 PF05402 Coenzyme PQQ synthesis protein D (PqqD) LG3211_4847 PF12706 Beta-lactamase superfamily domain LG3211_4848 PF03797 Autotransporter beta-domain LG3211_4849 PF01011 PQQ enzyme repeat LG3211_4849 PF13360 PQQ-like domain LG3211_4850 PF13683 Integrase core domain LG3211_4850 PF13276 HTH-like domain LG3211_4851 PF01527 Transposase LG3211_4857 PF02599 Global regulator protein family LG3211_4880 PF01343 Peptidase family S49 LG3211_4892 PF00145 C-5 cytosine-specific DNA methylase LG3211_4893 PF01555 DNA methylase LG3211_4914 PF18807 Tripartite Tc toxins repeat LG3211_4914 PF14431 YwqJ-like deaminase LG3211_4916 PF07971 Glycosyl hydrolase family 92 LG3211_4916 PF17678 Glycosyl hydrolase family 92 N-terminal domain LG3211_4917 PF00356 Bacterial regulatory proteins, lacI family LG3211_4918 PF07690 Major Facilitator Superfamily LG3211_4919 PF00294 pfkB family carbohydrate kinase LG3211_4926 PF03979 Sigma-70 factor, region 1.1 LG3211_4926 PF04539 Sigma-70 region 3 LG3211_4926 PF04546 Sigma-70, non-essential region LG3211_4926 PF04545 Sigma-70, region 4 LG3211_4926 PF04542 Sigma-70 region 2 LG3211_4926 PF00140 Sigma-70 factor, region 1.2 LG3211_4927 PF02580 D-Tyr-tRNA(Tyr) deacylase LG3211_4933 PF00535 Glycosyl transferase family 2 LG3211_4934 PF04932 O-Antigen ligase LG3211_4935 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LG3211_4936 PF01029 NusB family LG3211_4936 PF01189 16S rRNA methyltransferase RsmB/F LG3211_4937 PF00551 Formyl transferase LG3211_4937 PF02911 Formyl transferase, C-terminal domain LG3211_4938 PF01327 Polypeptide deformylase LG3211_4940 PF17782 DprA winged helix domain LG3211_4940 PF02481 DNA recombination-mediator protein A LG3211_4941 PF04361 Protein of unknown function (DUF494) LG3211_4942 PF00114 Pilin (bacterial filament) LG3211_4942 PF07963 Prokaryotic N-terminal methylation motif LG3211_4944 PF13368 Topoisomerase C-terminal repeat LG3211_4944 PF01751 Toprim domain LG3211_4944 PF01131 DNA topoisomerase LG3211_4945 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading LG3211_4945 PF18416 N-acetylglucosamine binding protein domain 2 LG3211_4946 PF01300 Telomere recombination LG3211_4947 PF00892 EamA-like transporter family LG3211_4952 PF01343 Peptidase family S49 LG3211_4954 PF01554 MatE LG3211_4959 PF00270 DEAD/DEAH box helicase LG3211_4959 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LG3211_4959 PF00271 Helicase conserved C-terminal domain LG3211_4959 PF17764 3′ DNA-binding domain (3′BD) LG3211_4959 PF18074 Primosomal protein N C-terminal domain LG3211_4963 PF00923 Transaldolase/Fructose-6-phosphate aldolase LG3211_4964 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_4966 PF04545 Sigma-70, region 4 LG3211_4966 PF04542 Sigma-70 region 2 LG3211_4967 PF00593 TonB dependent receptor LG3211_4967 PF07715 TonB-dependent Receptor Plug Domain LG3211_4971 PF00392 Bacterial regulatory proteins, gntR family LG3211_4971 PF00155 Aminotransferase class I and II LG3211_4972 PF00043 Glutathione S-transferase, C-terminal domain LG3211_4972 PF02798 Glutathione S-transferase, N-terminal domain LG3211_4978 PF00561 alpha/beta hydrolase fold LG3211_4980 PF00486 Transcriptional regulatory protein, C terminal LG3211_4980 PF00072 Response regulator receiver domain LG3211_4981 PF00672 HAMP domain LG3211_4981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4981 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4985 PF00501 AMP-binding enzyme LG3211_4985 PF13193 AMP-binding enzyme C-terminal domain LG3211_4985 PF00668 Condensation domain LG3211_4985 PF00550 Phosphopantetheine attachment site LG3211_4985 PF00975 Thioesterase domain LG3211_4986 PF03033 Glycosyltransferase family 28 N-terminal domain LG3211_4988 PF00884 Sulfatase LG3211_4988 PF08019 Phosphoethanolamine transferase EptA/EptB LG3211_4990 PF00072 Response regulator receiver domain LG3211_4990 PF00486 Transcriptional regulatory protein, C terminal LG3211_4991 PF00989 PAS fold LG3211_4991 PF00512 His Kinase A (phospho-acceptor) domain LG3211_4991 PF11808 Phosphate regulon sensor protein PhoR LG3211_4991 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_4996 PF02525 Flavodoxin-like fold LG3211_4997 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_4997 PF03466 LysR substrate binding domain LG3211_4999 PF03466 LysR substrate binding domain LG3211_4999 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_5002 PF00691 OmpA family LG3211_5002 PF01389 OmpA-like transmembrane domain LG3211_5004 PF03167 Uracil DNA glycosylase superfamily LG3211_5005 PF00072 Response regulator receiver domain LG3211_5005 PF01339 CheB methylesterase LG3211_5006 PF18075 FtsX extracellular domain LG3211_5007 PF00005 ABC transporter LG3211_5009 PF00271 Helicase conserved C-terminal domain LG3211_5009 PF00270 DEAD/DEAH box helicase LG3211_5009 PF12300 ATP-dependent RNA helicase RhlB LG3211_5010 PF00085 Thioredoxin LG3211_5011 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LG3211_5011 PF07497 Rho termination factor, RNA-binding domain LG3211_5011 PF07498 Rho termination factor, N-terminal domain LG3211_5015 PF00999 Sodium/hydrogen exchanger family LG3211_5015 PF02254 TrkA-N domain LG3211_5017 PF05166 YcgL domain LG3211_5020 PF05922 Peptidase inhibitor I9 LG3211_5020 PF00082 Subtilase family LG3211_5022 PF02322 Cytochrome bd terminal oxidase subunit II LG3211_5023 PF01654 Cytochrome bd terminal oxidase subunit I LG3211_5025 PF01218 Coproporphyrinogen III oxidase LG3211_5028 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LG3211_5028 PF01367 5'-3' exonuclease, C-terminal SAM fold LG3211_5028 PF01612 3'-5' exonuclease LG3211_5028 PF00476 DNA polymerase family A LG3211_5034 PF07715 TonB-dependent Receptor Plug Domain LG3211_5034 PF00593 TonB dependent receptor LG3211_5035 PF13361 UvrD-like helicase C-terminal domain LG3211_5035 PF00580 UvrD/REP helicase N-terminal domain LG3211_5038 PF03350 Uncharacterized protein family, UPF0114 LG3211_5039 PF02798 Glutathione S-transferase, N-terminal domain LG3211_5039 PF00043 Glutathione S-transferase, C-terminal domain LG3211_5040 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region LG3211_5040 PF00326 Prolyl oligopeptidase family LG3211_5044 PF00144 Beta-lactamase LG3211_5049 PF02801 Beta-ketoacyl synthase, C-terminal domain LG3211_5049 PF00109 Beta-ketoacyl synthase, N-terminal domain LG3211_5051 PF00535 Glycosyl transferase family 2 LG3211_5060 PF07977 FabA-like domain LG3211_5063 PF04820 Tryptophan halogenase LG3211_5069 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LG3211_5069 PF00005 ABC transporter LG3211_5070 PF12911 N-terminal TM domain of oligopeptide transport permease C LG3211_5070 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_5071 PF02082 Transcriptional regulator LG3211_5075 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_5076 PF00528 Binding-protein-dependent transport system inner membrane component LG3211_5077 PF00005 ABC transporter LG3211_5077 PF12857 TOBE-like domain LG3211_5078 PF00490 Delta-aminolevulinic acid dehydratase LG3211_5083 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LG3211_5083 PF01488 Shikimate / quinate 5-dehydrogenase LG3211_5083 PF08501 Shikimate dehydrogenase substrate binding domain LG3211_5085 PF03692 Putative zinc- or iron-chelating domain LG3211_5091 PF17863 AAA lid domain LG3211_5091 PF07726 ATPase family associated with various cellular activities (AAA) LG3211_5097 PF00132 Bacterial transferase hexapeptide (six repeats) LG3211_5100 PF00171 Aldehyde dehydrogenase family LG3211_5108 PF02527 rRNA small subunit methyltransferase G LG3211_5109 PF13614 AAA domain LG3211_5110 PF02195 ParB-like nuclease domain LG3211_5110 PF17762 HTH domain found in ParB protein LG3211_5113 PF01370 NAD dependent epimerase/dehydratase family LG3211_5114 PF00535 Glycosyl transferase family 2 LG3211_5117 PF00830 Ribosomal L28 family LG3211_5118 PF00471 Ribosomal protein L33 LG3211_5122 PF00512 His Kinase A (phospho-acceptor) domain LG3211_5122 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_5126 PF00072 Response regulator receiver domain LG3211_5126 PF00196 Bacterial regulatory proteins, luxR family LG3211_5128 PF16177 Acetyl-coenzyme A synthetase N-terminus LG3211_5128 PF13193 AMP-binding enzyme C-terminal domain LG3211_5128 PF00501 AMP-binding enzyme LG3211_5131 PF00083 Sugar (and other) transporter LG3211_5132 PF03167 Uracil DNA glycosylase superfamily LG3211_5133 PF03458 UPF0126 domain LG3211_5134 PF08281 Sigma-70, region 4 LG3211_5134 PF04542 Sigma-70 region 2 LG3211_5136 PF00005 ABC transporter LG3211_5145 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LG3211_5145 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LG3211_5145 PF06827 Zinc finger found in FPG and IleRS LG3211_5148 PF00069 Protein kinase domain LG3211_5148 PF03793 PASTA domain LG3211_5154 PF04357 TamB, inner membrane protein subunit of TAM complex LG3211_5155 PF07244 Surface antigen variable number repeat LG3211_5155 PF17243 POTRA domain TamA domain 1 LG3211_5155 PF01103 Surface antigen LG3211_5156 PF07715 TonB-dependent Receptor Plug Domain LG3211_5156 PF00593 TonB dependent receptor LG3211_5158 PF00593 TonB dependent receptor LG3211_5158 PF07715 TonB-dependent Receptor Plug Domain LG3211_5159 PF05746 DALR anticodon binding domain LG3211_5159 PF02092 Glycyl-tRNA synthetase beta subunit LG3211_5160 PF02091 Glycyl-tRNA synthetase alpha subunit LG3211_5161 PF02540 NAD synthase LG3211_5161 PF00117 Glutamine amidotransferase class-I LG3211_5161 PF00958 GMP synthase C terminal domain LG3211_5164 PF00902 Sec-independent protein translocase protein (TatC) LG3211_5165 PF02416 mttA/Hcf106 family LG3211_5166 PF02416 mttA/Hcf106 family LG3211_5170 PF00762 Ferrochelatase LG3211_5171 PF12697 Alpha/beta hydrolase family LG3211_5173 PF04381 Putative exonuclease, RdgC LG3211_5174 PF01171 PP-loop family LG3211_5181 PF01553 Acyltransferase LG3211_5184 PF05229 Spore Coat Protein U domain LG3211_5189 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) LG3211_5192 PF00561 alpha/beta hydrolase fold LG3211_5193 PF01042 Endoribonuclease L-PSP LG3211_5197 PF13361 UvrD-like helicase C-terminal domain LG3211_5197 PF00580 UvrD/REP helicase N-terminal domain LG3211_5200 PF00265 Thymidine kinase LG3211_5201 PF10127 RNA repair pathway DNA polymerase beta family LG3211_5203 PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family LG3211_5205 PF00012 Hsp70 protein LG3211_5206 PF09369 Domain of unknown function (DUF1998) LG3211_5206 PF00271 Helicase conserved C-terminal domain LG3211_5206 PF00270 DEAD/DEAH box helicase LG3211_5211 PF00545 ribonuclease LG3211_5215 PF07690 Major Facilitator Superfamily LG3211_5216 PF00310 Glutamine amidotransferases class-II LG3211_5216 PF01493 GXGXG motif LG3211_5216 PF01645 Conserved region in glutamate synthase LG3211_5216 PF04898 Glutamate synthase central domain LG3211_5218 PF07992 Pyridine nucleotide-disulphide oxidoreductase LG3211_5218 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LG3211_5219 PF01227 GTP cyclohydrolase I LG3211_5221 PF07694 5TMR of 5TMR-LYT LG3211_5221 PF00990 Diguanylate cyclase, GGDEF domain LG3211_5222 PF13536 Putative multidrug resistance efflux transporter LG3211_5223 PF13649 Methyltransferase domain LG3211_5224 PF12697 Alpha/beta hydrolase family LG3211_5226 PF00155 Aminotransferase class I and II LG3211_5227 PF06968 Biotin and Thiamin Synthesis associated domain LG3211_5227 PF04055 Radical SAM superfamily LG3211_5228 PF00156 Phosphoribosyl transferase domain LG3211_5232 PF02667 Short chain fatty acid transporter LG3211_5234 PF01040 UbiA prenyltransferase family LG3211_5238 PF01527 Transposase LG3211_5239 PF13333 Integrase core domain LG3211_5239 PF13276 HTH-like domain LG3211_5239 PF00665 Integrase core domain LG3211_5246 PF07995 Glucose / Sorbosone dehydrogenase LG3211_5248 PF00011 Hsp20/alpha crystallin family LG3211_5249 PF00067 Cytochrome P450 LG3211_5253 PF03466 LysR substrate binding domain LG3211_5253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_5257 PF00561 alpha/beta hydrolase fold LG3211_5260 PF00440 Bacterial regulatory proteins, tetR family LG3211_5260 PF16925 Tetracyclin repressor-like, C-terminal domain LG3211_5265 PF00293 NUDIX domain LG3211_5267 PF02567 Phenazine biosynthesis-like protein LG3211_5269 PF02525 Flavodoxin-like fold LG3211_5273 PF00753 Metallo-beta-lactamase superfamily LG3211_5273 PF16123 Hydroxyacylglutathione hydrolase C-terminus LG3211_5275 PF12706 Beta-lactamase superfamily domain LG3211_5288 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LG3211_5288 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LG3211_5288 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LG3211_5298 PF07694 5TMR of 5TMR-LYT LG3211_5298 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LG3211_5298 PF06580 Histidine kinase LG3211_5299 PF00072 Response regulator receiver domain LG3211_5299 PF04397 LytTr DNA-binding domain LG3211_5300 PF00425 chorismate binding enzyme LG3211_5300 PF00117 Glutamine amidotransferase class-I LG3211_5300 PF04715 Anthranilate synthase component I, N terminal region LG3211_5302 PF01483 Proprotein convertase P-domain LG3211_5302 PF01447 Thermolysin metallopeptidase, catalytic domain LG3211_5302 PF02868 Thermolysin metallopeptidase, alpha-helical domain LG3211_5302 PF07504 Fungalysin/Thermolysin Propeptide Motif LG3211_5303 PF00144 Beta-lactamase LG3211_5304 PF03738 Glutathionylspermidine synthase preATP-grasp LG3211_5306 PF03994 Domain of Unknown Function (DUF350) LG3211_5309 PF04012 PspA/IM30 family LG3211_5315 PF03969 AFG1-like ATPase LG3211_5319 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase LG3211_5320 PF02321 Outer membrane efflux protein LG3211_5321 PF13533 Biotin-lipoyl like LG3211_5325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_5325 PF03466 LysR substrate binding domain LG3211_5326 PF00248 Aldo/keto reductase family LG3211_5328 PF01546 Peptidase family M20/M25/M40 LG3211_5328 PF07687 Peptidase dimerisation domain LG3211_5331 PF07687 Peptidase dimerisation domain LG3211_5331 PF01546 Peptidase family M20/M25/M40 LG3211_5332 PF14489 QueF-like protein LG3211_5332 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term LG3211_5333 PF01476 LysM domain LG3211_5333 PF04972 BON domain LG3211_5336 PF02810 SEC-C motif LG3211_5336 PF03695 Uncharacterised protein family (UPF0149) LG3211_5338 PF03692 Putative zinc- or iron-chelating domain LG3211_5340 PF00180 Isocitrate/isopropylmalate dehydrogenase LG3211_5344 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) LG3211_5346 PF03466 LysR substrate binding domain LG3211_5346 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LG3211_5348 PF00849 RNA pseudouridylate synthase LG3211_5352 PF00248 Aldo/keto reductase family LG3211_5353 PF00990 Diguanylate cyclase, GGDEF domain LG3211_5353 PF00072 Response regulator receiver domain LG3211_5355 PF04408 Helicase associated domain (HA2) LG3211_5355 PF00270 DEAD/DEAH box helicase LG3211_5355 PF08482 ATP-dependent helicase C-terminal LG3211_5355 PF00271 Helicase conserved C-terminal domain LG3211_5357 PF01026 TatD related DNase LG3211_5361 PF01061 ABC-2 type transporter LG3211_5362 PF00005 ABC transporter LG3211_5365 PF00561 alpha/beta hydrolase fold LG3211_5366 PF00005 ABC transporter LG3211_5367 PF12679 ABC-2 family transporter protein LG3211_5369 PF13421 SPFH domain-Band 7 family LG3211_5372 PF07690 Major Facilitator Superfamily LG3211_5373 PF00248 Aldo/keto reductase family LG3211_5375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LG3211_5376 PF01926 50S ribosome-binding GTPase LG3211_5376 PF12631 MnmE helical domain LG3211_5376 PF10396 GTP-binding protein TrmE N-terminus LG3211_5378 PF02096 60Kd inner membrane protein LG3211_5378 PF14849 YidC periplasmic domain LG3211_5379 PF00825 Ribonuclease P LG3211_5380 PF00468 Ribosomal protein L34