locus-tag class description Mame_00001 PF11638 DnaA N-terminal domain Mame_00001 PF08299 Bacterial dnaA protein helix-turn-helix Mame_00001 PF00308 Bacterial dnaA protein Mame_00002 PF03960 ArsC family Mame_00003 PF04073 Aminoacyl-tRNA editing domain Mame_00006 PF02073 Thermophilic metalloprotease (M29) Mame_00007 PF02601 Exonuclease VII, large subunit Mame_00007 PF13742 OB-fold nucleic acid binding domain Mame_00011 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_00011 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00012 PF00248 Aldo/keto reductase family Mame_00015 PF00962 Adenosine/AMP deaminase Mame_00016 PF01676 Metalloenzyme superfamily Mame_00019 PF07687 Peptidase dimerisation domain Mame_00019 PF01546 Peptidase family M20/M25/M40 Mame_00021 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00022 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00023 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00023 PF00005 ABC transporter Mame_00024 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00024 PF00005 ABC transporter Mame_00026 PF03069 Acetamidase/Formamidase family Mame_00027 PF05343 M42 glutamyl aminopeptidase Mame_00028 PF01820 D-ala D-ala ligase N-terminus Mame_00028 PF07478 D-ala D-ala ligase C-terminus Mame_00029 PF00733 Asparagine synthase Mame_00029 PF13537 Glutamine amidotransferase domain Mame_00030 PF01047 MarR family Mame_00035 PF01244 Membrane dipeptidase (Peptidase family M19) Mame_00036 PF13454 FAD-NAD(P)-binding Mame_00037 PF03466 LysR substrate binding domain Mame_00037 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00038 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_00040 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_00043 PF01042 Endoribonuclease L-PSP Mame_00044 PF00291 Pyridoxal-phosphate dependent enzyme Mame_00046 PF03466 LysR substrate binding domain Mame_00046 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00048 PF08267 Cobalamin-independent synthase, N-terminal domain Mame_00048 PF01717 Cobalamin-independent synthase, Catalytic domain Mame_00051 PF00829 Ribosomal prokaryotic L21 protein Mame_00054 PF01625 Peptide methionine sulfoxide reductase Mame_00059 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Mame_00060 PF01048 Phosphorylase superfamily Mame_00061 PF01791 DeoC/LacD family aldolase Mame_00062 PF02885 Glycosyl transferase family, helical bundle domain Mame_00062 PF00591 Glycosyl transferase family, a/b domain Mame_00062 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Mame_00064 PF06233 Usg-like family Mame_00065 PF00248 Aldo/keto reductase family Mame_00069 PF00551 Formyl transferase Mame_00070 PF00150 Cellulase (glycosyl hydrolase family 5) Mame_00071 PF00152 tRNA synthetases class II (D, K and N) Mame_00072 PF09285 Elongation factor P, C-terminal Mame_00072 PF08207 Elongation factor P (EF-P) KOW-like domain Mame_00072 PF01132 Elongation factor P (EF-P) OB domain Mame_00073 PF01634 ATP phosphoribosyltransferase Mame_00074 PF13393 Histidyl-tRNA synthetase Mame_00076 PF00202 Aminotransferase class-III Mame_00077 PF00557 Metallopeptidase family M24 Mame_00077 PF01321 Creatinase/Prolidase N-terminal domain Mame_00078 PF01546 Peptidase family M20/M25/M40 Mame_00078 PF07687 Peptidase dimerisation domain Mame_00080 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_00080 PF07683 Cobalamin synthesis protein cobW C-terminal domain Mame_00081 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_00081 PF13378 Enolase C-terminal domain-like Mame_00083 PF01050 Mannose-6-phosphate isomerase Mame_00083 PF00483 Nucleotidyl transferase Mame_00084 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Mame_00084 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Mame_00084 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Mame_00084 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Mame_00085 PF13426 PAS domain Mame_00085 PF07536 HWE histidine kinase Mame_00085 PF08447 PAS fold Mame_00087 PF00156 Phosphoribosyl transferase domain Mame_00088 PF01544 CorA-like Mg2+ transporter protein Mame_00089 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter Mame_00090 PF00119 ATP synthase A chain Mame_00091 PF00137 ATP synthase subunit C Mame_00092 PF00430 ATP synthase B/B' CF(0) Mame_00093 PF00430 ATP synthase B/B' CF(0) Mame_00094 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Mame_00094 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain Mame_00096 PF00171 Aldehyde dehydrogenase family Mame_00097 PF02626 Carboxyltransferase domain, subdomain A and B Mame_00098 PF02682 Carboxyltransferase domain, subdomain C and D Mame_00100 PF08402 TOBE domain Mame_00100 PF00005 ABC transporter Mame_00101 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00103 PF00455 DeoR C terminal sensor domain Mame_00103 PF08220 DeoR-like helix-turn-helix domain Mame_00104 PF03797 Autotransporter beta-domain Mame_00104 PF00082 Subtilase family Mame_00104 PF12951 Passenger-associated-transport-repeat Mame_00105 PF01964 Radical SAM ThiC family Mame_00105 PF13667 ThiC-associated domain Mame_00108 PF02028 BCCT, betaine/carnitine/choline family transporter Mame_00110 PF00266 Aminotransferase class-V Mame_00111 PF00753 Metallo-beta-lactamase superfamily Mame_00118 PF05199 GMC oxidoreductase Mame_00118 PF00732 GMC oxidoreductase Mame_00120 PF00392 Bacterial regulatory proteins, gntR family Mame_00120 PF07729 FCD domain Mame_00121 PF12697 Alpha/beta hydrolase family Mame_00122 PF01494 FAD binding domain Mame_00125 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_00126 PF00732 GMC oxidoreductase Mame_00126 PF05199 GMC oxidoreductase Mame_00129 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_00129 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_00131 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_00132 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_00133 PF09084 NMT1/THI5 like Mame_00134 PF00005 ABC transporter Mame_00135 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00136 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00137 PF00682 HMGL-like Mame_00137 PF07836 DmpG-like communication domain Mame_00138 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation Mame_00138 PF01118 Semialdehyde dehydrogenase, NAD binding domain Mame_00139 PF00005 ABC transporter Mame_00140 PF00005 ABC transporter Mame_00140 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_00141 PF11862 Domain of unknown function (DUF3382) Mame_00141 PF02653 Branched-chain amino acid transport system / permease component Mame_00143 PF13458 Periplasmic binding protein Mame_00144 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_00145 PF01494 FAD binding domain Mame_00146 PF09339 IclR helix-turn-helix domain Mame_00146 PF01614 Bacterial transcriptional regulator Mame_00147 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_00148 PF12697 Alpha/beta hydrolase family Mame_00149 PF00005 ABC transporter Mame_00151 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment Mame_00152 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_00152 PF07683 Cobalamin synthesis protein cobW C-terminal domain Mame_00156 PF02630 SCO1/SenC Mame_00157 PF00005 ABC transporter Mame_00158 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00159 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00160 PF00497 Bacterial extracellular solute-binding proteins, family 3 Mame_00161 PF01053 Cys/Met metabolism PLP-dependent enzyme Mame_00162 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00162 PF03466 LysR substrate binding domain Mame_00163 PF03466 LysR substrate binding domain Mame_00163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00165 PF00356 Bacterial regulatory proteins, lacI family Mame_00166 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00167 PF08402 TOBE domain Mame_00167 PF00005 ABC transporter Mame_00168 PF13416 Bacterial extracellular solute-binding protein Mame_00169 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00170 PF07691 PA14 domain Mame_00170 PF14310 Fibronectin type III-like domain Mame_00170 PF00933 Glycosyl hydrolase family 3 N terminal domain Mame_00170 PF01915 Glycosyl hydrolase family 3 C-terminal domain Mame_00171 PF00557 Metallopeptidase family M24 Mame_00173 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00174 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00175 PF08402 TOBE domain Mame_00175 PF00005 ABC transporter Mame_00177 PF01177 Asp/Glu/Hydantoin racemase Mame_00179 PF01594 AI-2E family transporter Mame_00180 PF00378 Enoyl-CoA hydratase/isomerase Mame_00182 PF00501 AMP-binding enzyme Mame_00182 PF13193 AMP-binding enzyme C-terminal domain Mame_00183 PF00378 Enoyl-CoA hydratase/isomerase Mame_00184 PF02515 CoA-transferase family III Mame_00185 PF00378 Enoyl-CoA hydratase/isomerase Mame_00186 PF00682 HMGL-like Mame_00188 PF08402 TOBE domain Mame_00188 PF00005 ABC transporter Mame_00189 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00192 PF03737 Aldolase/RraA Mame_00193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00193 PF03466 LysR substrate binding domain Mame_00194 PF08450 SMP-30/Gluconolactonase/LRE-like region Mame_00195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_00195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_00196 PF00196 Bacterial regulatory proteins, luxR family Mame_00196 PF00072 Response regulator receiver domain Mame_00198 PF00144 Beta-lactamase Mame_00200 PF01042 Endoribonuclease L-PSP Mame_00203 PF01546 Peptidase family M20/M25/M40 Mame_00203 PF07687 Peptidase dimerisation domain Mame_00204 PF00355 Rieske [2Fe-2S] domain Mame_00204 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Mame_00205 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00209 PF03466 LysR substrate binding domain Mame_00210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00211 PF00884 Sulfatase Mame_00211 PF12411 Choline sulfatase enzyme C terminal Mame_00212 PF00884 Sulfatase Mame_00212 PF16347 Domain of unknown function (DUF4976) Mame_00213 PF00933 Glycosyl hydrolase family 3 N terminal domain Mame_00214 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00215 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00216 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00216 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_00217 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00217 PF00005 ABC transporter Mame_00218 PF00440 Bacterial regulatory proteins, tetR family Mame_00220 PF00933 Glycosyl hydrolase family 3 N terminal domain Mame_00220 PF14310 Fibronectin type III-like domain Mame_00220 PF07691 PA14 domain Mame_00220 PF01915 Glycosyl hydrolase family 3 C-terminal domain Mame_00222 PF01970 Tripartite tricarboxylate transporter TctA family Mame_00225 PF03401 Tripartite tricarboxylate transporter family receptor Mame_00227 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_00228 PF17336 Family of unknown function (DUF5368) Mame_00230 PF00478 IMP dehydrogenase / GMP reductase domain Mame_00230 PF00571 CBS domain Mame_00231 PF00231 ATP synthase Mame_00232 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Mame_00232 PF02874 ATP synthase alpha/beta family, beta-barrel domain Mame_00232 PF00306 ATP synthase alpha/beta chain, C terminal domain Mame_00233 PF00430 ATP synthase B/B' CF(0) Mame_00234 PF00137 ATP synthase subunit C Mame_00235 PF00119 ATP synthase A chain Mame_00238 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain Mame_00238 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Mame_00239 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Mame_00239 PF02874 ATP synthase alpha/beta family, beta-barrel domain Mame_00241 PF00696 Amino acid kinase family Mame_00242 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Mame_00242 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Mame_00244 PF03606 C4-dicarboxylate anaerobic carrier Mame_00245 PF01965 DJ-1/PfpI family Mame_00246 PF00483 Nucleotidyl transferase Mame_00247 PF04321 RmlD substrate binding domain Mame_00248 PF16363 GDP-mannose 4,6 dehydratase Mame_00249 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase Mame_00250 PF01501 Glycosyl transferase family 8 Mame_00252 PF00912 Transglycosylase Mame_00252 PF00905 Penicillin binding protein transpeptidase domain Mame_00253 PF01609 Transposase DDE domain Mame_00253 PF13808 DDE_Tnp_1-associated Mame_00254 PF01546 Peptidase family M20/M25/M40 Mame_00254 PF07687 Peptidase dimerisation domain Mame_00255 PF00893 Small Multidrug Resistance protein Mame_00256 PF01367 5'-3' exonuclease, C-terminal SAM fold Mame_00256 PF01612 3'-5' exonuclease Mame_00256 PF00476 DNA polymerase family A Mame_00256 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain Mame_00257 PF02653 Branched-chain amino acid transport system / permease component Mame_00258 PF00005 ABC transporter Mame_00261 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_00261 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_00264 PF04199 Putative cyclase Mame_00267 PF01261 Xylose isomerase-like TIM barrel Mame_00268 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_00268 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_00269 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Mame_00269 PF00356 Bacterial regulatory proteins, lacI family Mame_00272 PF00550 Phosphopantetheine attachment site Mame_00272 PF01370 NAD dependent epimerase/dehydratase family Mame_00272 PF00501 AMP-binding enzyme Mame_00273 PF00455 DeoR C terminal sensor domain Mame_00273 PF08220 DeoR-like helix-turn-helix domain Mame_00275 PF01979 Amidohydrolase family Mame_00278 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_00278 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00281 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00282 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00284 PF00005 ABC transporter Mame_00284 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00285 PF00005 ABC transporter Mame_00285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00286 PF03328 HpcH/HpaI aldolase/citrate lyase family Mame_00287 PF01022 Bacterial regulatory protein, arsR family Mame_00290 PF00266 Aminotransferase class-V Mame_00292 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00296 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00297 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00298 PF00005 ABC transporter Mame_00298 PF17912 MalK OB fold domain Mame_00299 PF03009 Glycerophosphoryl diester phosphodiesterase family Mame_00300 PF00356 Bacterial regulatory proteins, lacI family Mame_00301 PF00459 Inositol monophosphatase family Mame_00302 PF03459 TOBE domain Mame_00302 PF17912 MalK OB fold domain Mame_00302 PF00005 ABC transporter Mame_00303 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00304 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00305 PF01547 Bacterial extracellular solute-binding protein Mame_00306 PF00480 ROK family Mame_00309 PF00248 Aldo/keto reductase family Mame_00311 PF06964 Alpha-L-arabinofuranosidase C-terminal domain Mame_00313 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00315 PF00005 ABC transporter Mame_00315 PF03459 TOBE domain Mame_00315 PF17912 MalK OB fold domain Mame_00317 PF01968 Hydantoinase/oxoprolinase Mame_00317 PF05378 Hydantoinase/oxoprolinase N-terminal region Mame_00318 PF02653 Branched-chain amino acid transport system / permease component Mame_00319 PF00005 ABC transporter Mame_00323 PF00392 Bacterial regulatory proteins, gntR family Mame_00323 PF07729 FCD domain Mame_00324 PF00701 Dihydrodipicolinate synthetase family Mame_00325 PF05544 Proline racemase Mame_00326 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00328 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00330 PF00005 ABC transporter Mame_00330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00331 PF00005 ABC transporter Mame_00331 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00333 PF00356 Bacterial regulatory proteins, lacI family Mame_00334 PF01547 Bacterial extracellular solute-binding protein Mame_00335 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00336 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00338 PF00005 ABC transporter Mame_00338 PF03459 TOBE domain Mame_00338 PF17912 MalK OB fold domain Mame_00340 PF07690 Major Facilitator Superfamily Mame_00341 PF00583 Acetyltransferase (GNAT) family Mame_00342 PF00171 Aldehyde dehydrogenase family Mame_00343 PF02615 Malate/L-lactate dehydrogenase Mame_00344 PF01321 Creatinase/Prolidase N-terminal domain Mame_00344 PF00557 Metallopeptidase family M24 Mame_00345 PF01266 FAD dependent oxidoreductase Mame_00346 PF07729 FCD domain Mame_00346 PF00392 Bacterial regulatory proteins, gntR family Mame_00347 PF12951 Passenger-associated-transport-repeat Mame_00347 PF00082 Subtilase family Mame_00347 PF03797 Autotransporter beta-domain Mame_00349 PF05199 GMC oxidoreductase Mame_00349 PF00732 GMC oxidoreductase Mame_00354 PF00465 Iron-containing alcohol dehydrogenase Mame_00357 PF00775 Dioxygenase Mame_00357 PF04444 Catechol dioxygenase N terminus Mame_00358 PF11862 Domain of unknown function (DUF3382) Mame_00358 PF02653 Branched-chain amino acid transport system / permease component Mame_00359 PF02653 Branched-chain amino acid transport system / permease component Mame_00360 PF00005 ABC transporter Mame_00361 PF00005 ABC transporter Mame_00364 PF00561 alpha/beta hydrolase fold Mame_00365 PF00107 Zinc-binding dehydrogenase Mame_00365 PF08240 Alcohol dehydrogenase GroES-like domain Mame_00366 PF02653 Branched-chain amino acid transport system / permease component Mame_00368 PF00005 ABC transporter Mame_00369 PF00005 ABC transporter Mame_00373 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00374 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00375 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_00375 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00376 PF00005 ABC transporter Mame_00376 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00377 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Mame_00377 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Mame_00382 PF17863 AAA lid domain Mame_00382 PF07726 ATPase family associated with various cellular activities (AAA) Mame_00385 PF12146 Serine aminopeptidase, S33 Mame_00386 PF16347 Domain of unknown function (DUF4976) Mame_00386 PF00884 Sulfatase Mame_00388 PF01970 Tripartite tricarboxylate transporter TctA family Mame_00390 PF03401 Tripartite tricarboxylate transporter family receptor Mame_00391 PF03466 LysR substrate binding domain Mame_00391 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00393 PF00005 ABC transporter Mame_00393 PF17912 MalK OB fold domain Mame_00394 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00395 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00398 PF03466 LysR substrate binding domain Mame_00398 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00400 PF02653 Branched-chain amino acid transport system / permease component Mame_00401 PF00005 ABC transporter Mame_00402 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Mame_00404 PF01370 NAD dependent epimerase/dehydratase family Mame_00404 PF08338 Domain of unknown function (DUF1731) Mame_00405 PF00005 ABC transporter Mame_00406 PF02653 Branched-chain amino acid transport system / permease component Mame_00407 PF00356 Bacterial regulatory proteins, lacI family Mame_00408 PF03466 LysR substrate binding domain Mame_00408 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_00410 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_00411 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_00412 PF07883 Cupin domain Mame_00412 PF05899 Protein of unknown function (DUF861) Mame_00418 PF02515 CoA-transferase family III Mame_00419 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00419 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00420 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00423 PF12146 Serine aminopeptidase, S33 Mame_00424 PF02515 CoA-transferase family III Mame_00426 PF01613 Flavin reductase like domain Mame_00427 PF00378 Enoyl-CoA hydratase/isomerase Mame_00430 PF00378 Enoyl-CoA hydratase/isomerase Mame_00430 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_00430 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_00431 PF02515 CoA-transferase family III Mame_00437 PF12833 Helix-turn-helix domain Mame_00437 PF02311 AraC-like ligand binding domain Mame_00438 PF11975 Family 4 glycosyl hydrolase C-terminal domain Mame_00438 PF02056 Family 4 glycosyl hydrolase Mame_00439 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00440 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00441 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00441 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_00442 PF00005 ABC transporter Mame_00442 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00443 PF11975 Family 4 glycosyl hydrolase C-terminal domain Mame_00443 PF02056 Family 4 glycosyl hydrolase Mame_00445 PF00135 Carboxylesterase family Mame_00446 PF00005 ABC transporter Mame_00446 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00447 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00447 PF00005 ABC transporter Mame_00448 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00449 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00449 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_00450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00455 PF04198 Putative sugar-binding domain Mame_00456 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_00456 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_00457 PF02779 Transketolase, pyrimidine binding domain Mame_00457 PF02780 Transketolase, C-terminal domain Mame_00458 PF00456 Transketolase, thiamine diphosphate binding domain Mame_00459 PF02653 Branched-chain amino acid transport system / permease component Mame_00460 PF13407 Periplasmic binding protein domain Mame_00461 PF00005 ABC transporter Mame_00464 PF00196 Bacterial regulatory proteins, luxR family Mame_00464 PF00072 Response regulator receiver domain Mame_00465 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00467 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00467 PF00005 ABC transporter Mame_00471 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00472 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_00472 PF01571 Aminomethyltransferase folate-binding domain Mame_00472 PF17806 Sarcosine oxidase A3 domain Mame_00472 PF08669 Glycine cleavage T-protein C-terminal barrel domain Mame_00475 PF02653 Branched-chain amino acid transport system / permease component Mame_00476 PF00005 ABC transporter Mame_00477 PF00392 Bacterial regulatory proteins, gntR family Mame_00477 PF07702 UTRA domain Mame_00478 PF01370 NAD dependent epimerase/dehydratase family Mame_00479 PF07005 Sugar-binding N-terminal domain Mame_00479 PF17042 Nucleotide-binding C-terminal domain Mame_00480 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_00481 PF01261 Xylose isomerase-like TIM barrel Mame_00483 PF00486 Transcriptional regulatory protein, C terminal Mame_00483 PF00072 Response regulator receiver domain Mame_00484 PF00512 His Kinase A (phospho-acceptor) domain Mame_00484 PF00072 Response regulator receiver domain Mame_00484 PF00989 PAS fold Mame_00484 PF01627 Hpt domain Mame_00484 PF18415 Histidine kinase receptor ArcB trans-membrane domain Mame_00484 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00485 PF00158 Sigma-54 interaction domain Mame_00485 PF13188 PAS domain Mame_00485 PF02954 Bacterial regulatory protein, Fis family Mame_00488 PF00005 ABC transporter Mame_00488 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_00489 PF00005 ABC transporter Mame_00490 PF03069 Acetamidase/Formamidase family Mame_00492 PF05717 IS66 Orf2 like protein Mame_00494 PF00378 Enoyl-CoA hydratase/isomerase Mame_00495 PF00682 HMGL-like Mame_00496 PF00364 Biotin-requiring enzyme Mame_00496 PF02785 Biotin carboxylase C-terminal domain Mame_00496 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_00496 PF00289 Biotin carboxylase, N-terminal domain Mame_00497 PF01039 Carboxyl transferase domain Mame_00498 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_00502 PF00501 AMP-binding enzyme Mame_00502 PF13193 AMP-binding enzyme C-terminal domain Mame_00505 PF02515 CoA-transferase family III Mame_00506 PF02803 Thiolase, C-terminal domain Mame_00506 PF00108 Thiolase, N-terminal domain Mame_00507 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00507 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00507 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00508 PF02803 Thiolase, C-terminal domain Mame_00508 PF00108 Thiolase, N-terminal domain Mame_00509 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_00509 PF00378 Enoyl-CoA hydratase/isomerase Mame_00509 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_00510 PF00378 Enoyl-CoA hydratase/isomerase Mame_00513 PF00106 short chain dehydrogenase Mame_00514 PF01012 Electron transfer flavoprotein domain Mame_00514 PF00766 Electron transfer flavoprotein FAD-binding domain Mame_00515 PF01012 Electron transfer flavoprotein domain Mame_00517 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00517 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00517 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00518 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00518 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00518 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00520 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00521 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_00521 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_00521 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_00522 PF00378 Enoyl-CoA hydratase/isomerase Mame_00523 PF13193 AMP-binding enzyme C-terminal domain Mame_00523 PF00501 AMP-binding enzyme Mame_00524 PF01614 Bacterial transcriptional regulator Mame_00524 PF09339 IclR helix-turn-helix domain Mame_00525 PF13452 N-terminal half of MaoC dehydratase Mame_00527 PF00378 Enoyl-CoA hydratase/isomerase Mame_00530 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_00531 PF03328 HpcH/HpaI aldolase/citrate lyase family Mame_00533 PF02515 CoA-transferase family III Mame_00537 PF07729 FCD domain Mame_00537 PF00392 Bacterial regulatory proteins, gntR family Mame_00539 PF00005 ABC transporter Mame_00540 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_00540 PF00005 ABC transporter Mame_00542 PF02653 Branched-chain amino acid transport system / permease component Mame_00543 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_00543 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_00546 PF02515 CoA-transferase family III Mame_00547 PF00873 AcrB/AcrD/AcrF family Mame_00548 PF00529 HlyD membrane-fusion protein of T1SS Mame_00548 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_00550 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00551 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00552 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00553 PF00005 ABC transporter Mame_00553 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00554 PF13378 Enolase C-terminal domain-like Mame_00554 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_00555 PF01370 NAD dependent epimerase/dehydratase family Mame_00556 PF01263 Aldose 1-epimerase Mame_00557 PF07729 FCD domain Mame_00557 PF00392 Bacterial regulatory proteins, gntR family Mame_00558 PF03737 Aldolase/RraA Mame_00559 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_00559 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_00561 PF00171 Aldehyde dehydrogenase family Mame_00562 PF01515 Phosphate acetyl/butaryl transferase Mame_00562 PF03949 Malic enzyme, NAD binding domain Mame_00562 PF00390 Malic enzyme, N-terminal domain Mame_00563 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_00563 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_00564 PF08450 SMP-30/Gluconolactonase/LRE-like region Mame_00565 PF01370 NAD dependent epimerase/dehydratase family Mame_00567 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00568 PF02810 SEC-C motif Mame_00568 PF00557 Metallopeptidase family M24 Mame_00569 PF01037 Lrp/AsnC ligand binding domain Mame_00570 PF00266 Aminotransferase class-V Mame_00571 PF13454 FAD-NAD(P)-binding Mame_00574 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_00574 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_00575 PF01527 Transposase Mame_00576 PF13683 Integrase core domain Mame_00576 PF13276 HTH-like domain Mame_00584 PF03576 Peptidase family S58 Mame_00585 PF02321 Outer membrane efflux protein Mame_00586 PF00873 AcrB/AcrD/AcrF family Mame_00587 PF00529 HlyD membrane-fusion protein of T1SS Mame_00587 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_00589 PF01259 SAICAR synthetase Mame_00590 PF01810 LysE type translocator Mame_00591 PF04055 Radical SAM superfamily Mame_00592 PF04349 Periplasmic glucan biosynthesis protein, MdoG Mame_00593 PF00085 Thioredoxin Mame_00594 PF12705 PD-(D/E)XK nuclease superfamily Mame_00594 PF00580 UvrD/REP helicase N-terminal domain Mame_00594 PF13361 UvrD-like helicase C-terminal domain Mame_00596 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mame_00597 PF00512 His Kinase A (phospho-acceptor) domain Mame_00597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00599 PF01042 Endoribonuclease L-PSP Mame_00601 PF01168 Alanine racemase, N-terminal domain Mame_00601 PF14031 Putative serine dehydratase domain Mame_00602 PF03932 CutC family Mame_00605 PF00728 Glycosyl hydrolase family 20, catalytic domain Mame_00605 PF02838 Glycosyl hydrolase family 20, domain 2 Mame_00606 PF01380 SIS domain Mame_00606 PF02685 Glucokinase Mame_00606 PF01418 Helix-turn-helix domain, rpiR family Mame_00608 PF07171 MlrC C-terminus Mame_00608 PF07364 Metallopeptidase family M81 Mame_00609 PF00012 Hsp70 protein Mame_00610 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme Mame_00613 PF01227 GTP cyclohydrolase I Mame_00620 PF00589 Phage integrase family Mame_00625 PF00005 ABC transporter Mame_00626 PF13744 Helix-turn-helix domain Mame_00628 PF01614 Bacterial transcriptional regulator Mame_00628 PF09339 IclR helix-turn-helix domain Mame_00630 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_00631 PF00107 Zinc-binding dehydrogenase Mame_00631 PF08240 Alcohol dehydrogenase GroES-like domain Mame_00632 PF01575 MaoC like domain Mame_00633 PF00501 AMP-binding enzyme Mame_00633 PF13193 AMP-binding enzyme C-terminal domain Mame_00635 PF00005 ABC transporter Mame_00635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00636 PF00005 ABC transporter Mame_00636 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_00637 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00637 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_00638 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00639 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_00641 PF02445 Quinolinate synthetase A protein Mame_00642 PF00890 FAD binding domain Mame_00642 PF02910 Fumarate reductase flavoprotein C-term Mame_00643 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain Mame_00643 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain Mame_00647 PF03600 Citrate transporter Mame_00647 PF02080 TrkA-C domain Mame_00649 PF00268 Ribonucleotide reductase, small chain Mame_00650 PF08343 Ribonucleotide reductase N-terminal Mame_00650 PF00317 Ribonucleotide reductase, all-alpha domain Mame_00650 PF02867 Ribonucleotide reductase, barrel domain Mame_00651 PF07972 NrdI Flavodoxin like Mame_00652 PF00462 Glutaredoxin Mame_00654 PF03626 Prokaryotic Cytochrome C oxidase subunit IV Mame_00655 PF00510 Cytochrome c oxidase subunit III Mame_00656 PF00115 Cytochrome C and Quinol oxidase polypeptide I Mame_00657 PF06481 COX Aromatic Rich Motif Mame_00657 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Mame_00659 PF00342 Phosphoglucose isomerase Mame_00660 PF00005 ABC transporter Mame_00661 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_00661 PF00005 ABC transporter Mame_00663 PF02653 Branched-chain amino acid transport system / permease component Mame_00667 PF00501 AMP-binding enzyme Mame_00667 PF13193 AMP-binding enzyme C-terminal domain Mame_00669 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Mame_00670 PF00106 short chain dehydrogenase Mame_00671 PF01042 Endoribonuclease L-PSP Mame_00674 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_00676 PF01261 Xylose isomerase-like TIM barrel Mame_00677 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_00677 PF01266 FAD dependent oxidoreductase Mame_00678 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_00678 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_00679 PF04198 Putative sugar-binding domain Mame_00681 PF00005 ABC transporter Mame_00682 PF02653 Branched-chain amino acid transport system / permease component Mame_00683 PF13407 Periplasmic binding protein domain Mame_00684 PF08220 DeoR-like helix-turn-helix domain Mame_00684 PF00455 DeoR C terminal sensor domain Mame_00685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_00685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_00687 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_00687 PF01266 FAD dependent oxidoreductase Mame_00689 PF02371 Transposase IS116/IS110/IS902 family Mame_00689 PF01548 Transposase Mame_00690 PF02502 Ribose/Galactose Isomerase Mame_00691 PF00121 Triosephosphate isomerase Mame_00692 PF08220 DeoR-like helix-turn-helix domain Mame_00692 PF00455 DeoR C terminal sensor domain Mame_00693 PF05199 GMC oxidoreductase Mame_00693 PF00732 GMC oxidoreductase Mame_00694 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Mame_00694 PF00356 Bacterial regulatory proteins, lacI family Mame_00695 PF04551 GcpE protein Mame_00696 PF07690 Major Facilitator Superfamily Mame_00698 PF01047 MarR family Mame_00699 PF00892 EamA-like transporter family Mame_00700 PF00289 Biotin carboxylase, N-terminal domain Mame_00700 PF00364 Biotin-requiring enzyme Mame_00700 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_00700 PF02785 Biotin carboxylase C-terminal domain Mame_00700 PF00682 HMGL-like Mame_00700 PF02436 Conserved carboxylase domain Mame_00701 PF00083 Sugar (and other) transporter Mame_00701 PF07690 Major Facilitator Superfamily Mame_00703 PF00072 Response regulator receiver domain Mame_00707 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Mame_00708 PF00291 Pyridoxal-phosphate dependent enzyme Mame_00711 PF00290 Tryptophan synthase alpha chain Mame_00712 PF01039 Carboxyl transferase domain Mame_00713 PF02875 Mur ligase family, glutamate ligase domain Mame_00713 PF08245 Mur ligase middle domain Mame_00715 PF03734 L,D-transpeptidase catalytic domain Mame_00715 PF01476 LysM domain Mame_00715 PF17969 L,D-transpeptidase C-terminal domain Mame_00716 PF05221 S-adenosyl-L-homocysteine hydrolase Mame_00716 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Mame_00717 PF17484 N-Lobe handle Tf-binding protein B Mame_00717 PF01298 C-lobe and N-lobe beta barrels of Tf-binding protein B Mame_00717 PF17483 C-lobe handle domain of Tf-binding protein B Mame_00718 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_00718 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_00719 PF13419 Haloacid dehalogenase-like hydrolase Mame_00720 PF01232 Mannitol dehydrogenase Rossmann domain Mame_00720 PF08125 Mannitol dehydrogenase C-terminal domain Mame_00721 PF08402 TOBE domain Mame_00721 PF00005 ABC transporter Mame_00722 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00723 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00725 PF00204 DNA gyrase B Mame_00725 PF00986 DNA gyrase B subunit, carboxyl terminus Mame_00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00725 PF01751 Toprim domain Mame_00726 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Mame_00727 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00728 PF00005 ABC transporter Mame_00729 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00731 PF03358 NADPH-dependent FMN reductase Mame_00732 PF01638 HxlR-like helix-turn-helix Mame_00733 PF01609 Transposase DDE domain Mame_00733 PF13808 DDE_Tnp_1-associated Mame_00734 PF13193 AMP-binding enzyme C-terminal domain Mame_00734 PF00501 AMP-binding enzyme Mame_00734 PF16177 Acetyl-coenzyme A synthetase N-terminus Mame_00736 PF01638 HxlR-like helix-turn-helix Mame_00737 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_00737 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Mame_00739 PF01168 Alanine racemase, N-terminal domain Mame_00740 PF08264 Anticodon-binding domain of tRNA Mame_00740 PF00133 tRNA synthetases class I (I, L, M and V) Mame_00740 PF13603 Leucyl-tRNA synthetase, Domain 2 Mame_00743 PF17762 HTH domain found in ParB protein Mame_00743 PF02195 ParB-like nuclease domain Mame_00744 PF13614 AAA domain Mame_00745 PF02527 rRNA small subunit methyltransferase G Mame_00746 PF01134 Glucose inhibited division protein A Mame_00746 PF13932 GidA associated domain Mame_00747 PF12631 MnmE helical domain Mame_00747 PF01926 50S ribosome-binding GTPase Mame_00747 PF10396 GTP-binding protein TrmE N-terminus Mame_00748 PF07498 Rho termination factor, N-terminal domain Mame_00748 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Mame_00748 PF07497 Rho termination factor, RNA-binding domain Mame_00750 PF01208 Uroporphyrinogen decarboxylase (URO-D) Mame_00751 PF03618 Kinase/pyrophosphorylase Mame_00752 PF02545 Maf-like protein Mame_00753 PF01488 Shikimate / quinate 5-dehydrogenase Mame_00753 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Mame_00753 PF08501 Shikimate dehydrogenase substrate binding domain Mame_00754 PF01121 Dephospho-CoA kinase Mame_00755 PF00929 Exonuclease Mame_00757 PF04198 Putative sugar-binding domain Mame_00758 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Mame_00759 PF16653 Saccharopine dehydrogenase C-terminal domain Mame_00759 PF03435 Saccharopine dehydrogenase NADP binding domain Mame_00761 PF02441 Flavoprotein Mame_00761 PF04127 DNA / pantothenate metabolism flavoprotein Mame_00762 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00762 PF00512 His Kinase A (phospho-acceptor) domain Mame_00763 PF08482 ATP-dependent helicase C-terminal Mame_00763 PF00270 DEAD/DEAH box helicase Mame_00763 PF04408 Helicase associated domain (HA2) Mame_00763 PF00271 Helicase conserved C-terminal domain Mame_00765 PF00990 Diguanylate cyclase, GGDEF domain Mame_00765 PF10442 FIST C domain Mame_00765 PF08495 FIST N domain Mame_00765 PF00563 EAL domain Mame_00766 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00766 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_00767 PF00392 Bacterial regulatory proteins, gntR family Mame_00768 PF00296 Luciferase-like monooxygenase Mame_00769 PF00248 Aldo/keto reductase family Mame_00770 PF01613 Flavin reductase like domain Mame_00772 PF00677 Lumazine binding domain Mame_00775 PF00764 Arginosuccinate synthase Mame_00777 PF07690 Major Facilitator Superfamily Mame_00779 PF01432 Peptidase family M3 Mame_00780 PF00294 pfkB family carbohydrate kinase Mame_00781 PF00156 Phosphoribosyl transferase domain Mame_00782 PF00512 His Kinase A (phospho-acceptor) domain Mame_00782 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00782 PF00989 PAS fold Mame_00782 PF16736 Single Cache-like Mame_00784 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00785 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00786 PF00005 ABC transporter Mame_00787 PF01895 PhoU domain Mame_00788 PF00486 Transcriptional regulatory protein, C terminal Mame_00788 PF00072 Response regulator receiver domain Mame_00789 PF00743 Flavin-binding monooxygenase-like Mame_00790 PF00171 Aldehyde dehydrogenase family Mame_00791 PF00465 Iron-containing alcohol dehydrogenase Mame_00794 PF01063 Amino-transferase class IV Mame_00797 PF13532 2OG-Fe(II) oxygenase superfamily Mame_00798 PF00472 RF-1 domain Mame_00800 PF01293 Phosphoenolpyruvate carboxykinase Mame_00801 PF00072 Response regulator receiver domain Mame_00801 PF00486 Transcriptional regulatory protein, C terminal Mame_00802 PF00512 His Kinase A (phospho-acceptor) domain Mame_00802 PF13755 Sensor N-terminal transmembrane domain Mame_00802 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00802 PF13756 Stimulus-sensing domain Mame_00802 PF00672 HAMP domain Mame_00804 PF03830 PTS system sorbose subfamily IIB component Mame_00804 PF03610 PTS system fructose IIA component Mame_00805 PF00381 PTS HPr component phosphorylation site Mame_00807 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00810 PF00171 Aldehyde dehydrogenase family Mame_00812 PF02515 CoA-transferase family III Mame_00813 PF03401 Tripartite tricarboxylate transporter family receptor Mame_00814 PF01970 Tripartite tricarboxylate transporter TctA family Mame_00818 PF00512 His Kinase A (phospho-acceptor) domain Mame_00818 PF08446 PAS fold Mame_00818 PF01590 GAF domain Mame_00818 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_00818 PF00360 Phytochrome region Mame_00822 PF04186 FxsA cytoplasmic membrane protein Mame_00823 PF02556 Preprotein translocase subunit SecB Mame_00824 PF00171 Aldehyde dehydrogenase family Mame_00825 PF17912 MalK OB fold domain Mame_00825 PF00005 ABC transporter Mame_00825 PF03459 TOBE domain Mame_00826 PF00392 Bacterial regulatory proteins, gntR family Mame_00826 PF07729 FCD domain Mame_00827 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00830 PF05199 GMC oxidoreductase Mame_00830 PF00732 GMC oxidoreductase Mame_00831 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_00831 PF13378 Enolase C-terminal domain-like Mame_00832 PF01547 Bacterial extracellular solute-binding protein Mame_00833 PF05199 GMC oxidoreductase Mame_00833 PF00732 GMC oxidoreductase Mame_00834 PF00171 Aldehyde dehydrogenase family Mame_00835 PF00884 Sulfatase Mame_00835 PF12411 Choline sulfatase enzyme C terminal Mame_00836 PF00440 Bacterial regulatory proteins, tetR family Mame_00836 PF13977 BetI-type transcriptional repressor, C-terminal Mame_00837 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Mame_00838 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00839 PF00571 CBS domain Mame_00839 PF00005 ABC transporter Mame_00843 PF13419 Haloacid dehalogenase-like hydrolase Mame_00846 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_00846 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00847 PF01144 Coenzyme A transferase Mame_00848 PF00378 Enoyl-CoA hydratase/isomerase Mame_00850 PF01547 Bacterial extracellular solute-binding protein Mame_00851 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00853 PF00005 ABC transporter Mame_00853 PF17912 MalK OB fold domain Mame_00853 PF03459 TOBE domain Mame_00854 PF00732 GMC oxidoreductase Mame_00854 PF05199 GMC oxidoreductase Mame_00859 PF00149 Calcineurin-like phosphoesterase Mame_00859 PF02872 5'-nucleotidase, C-terminal domain Mame_00860 PF00762 Ferrochelatase Mame_00861 PF16200 C-terminal region of band_7 Mame_00861 PF01145 SPFH domain / Band 7 family Mame_00862 PF01957 NfeD-like C-terminal, partner-binding Mame_00866 PF00072 Response regulator receiver domain Mame_00866 PF00486 Transcriptional regulatory protein, C terminal Mame_00868 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_00868 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_00871 PF03484 tRNA synthetase B5 domain Mame_00871 PF01588 Putative tRNA binding domain Mame_00871 PF03147 Ferredoxin-fold anticodon binding domain Mame_00871 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain Mame_00871 PF03483 B3/4 domain Mame_00873 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain Mame_00873 PF01409 tRNA synthetases class II core domain (F) Mame_00874 PF00453 Ribosomal protein L20 Mame_00875 PF01632 Ribosomal protein L35 Mame_00876 PF05198 Translation initiation factor IF-3, N-terminal domain Mame_00876 PF00707 Translation initiation factor IF-3, C-terminal domain Mame_00877 PF12146 Serine aminopeptidase, S33 Mame_00879 PF02146 Sir2 family Mame_00881 PF00491 Arginase family Mame_00882 PF00990 Diguanylate cyclase, GGDEF domain Mame_00883 PF00348 Polyprenyl synthetase Mame_00884 PF00912 Transglycosylase Mame_00885 PF13417 Glutathione S-transferase, N-terminal domain Mame_00885 PF00043 Glutathione S-transferase, C-terminal domain Mame_00886 PF01783 Ribosomal L32p protein family Mame_00887 PF07879 PHB/PHA accumulation regulator DNA-binding domain Mame_00887 PF05233 PHB accumulation regulatory domain Mame_00888 PF00108 Thiolase, N-terminal domain Mame_00888 PF02803 Thiolase, C-terminal domain Mame_00895 PF11953 Domain of unknown function (DUF3470) Mame_00895 PF00037 4Fe-4S binding domain Mame_00896 PF02559 CarD-like/TRCF domain Mame_00897 PF04545 Sigma-70, region 4 Mame_00897 PF04542 Sigma-70 region 2 Mame_00897 PF00140 Sigma-70 factor, region 1.2 Mame_00899 PF00005 ABC transporter Mame_00900 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00902 PF01547 Bacterial extracellular solute-binding protein Mame_00904 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Mame_00905 PF04349 Periplasmic glucan biosynthesis protein, MdoG Mame_00907 PF13632 Glycosyl transferase family group 2 Mame_00909 PF07690 Major Facilitator Superfamily Mame_00914 PF01594 AI-2E family transporter Mame_00915 PF00005 ABC transporter Mame_00916 PF02653 Branched-chain amino acid transport system / permease component Mame_00917 PF13407 Periplasmic binding protein domain Mame_00919 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_00919 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_00920 PF00232 Glycosyl hydrolase family 1 Mame_00921 PF00005 ABC transporter Mame_00921 PF17912 MalK OB fold domain Mame_00922 PF01547 Bacterial extracellular solute-binding protein Mame_00923 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00924 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00930 PF00923 Transaldolase/Fructose-6-phosphate aldolase Mame_00931 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Mame_00931 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Mame_00933 PF10576 Iron-sulfur binding domain of endonuclease III Mame_00933 PF00633 Helix-hairpin-helix motif Mame_00933 PF00730 HhH-GPD superfamily base excision DNA repair protein Mame_00934 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Mame_00934 PF08240 Alcohol dehydrogenase GroES-like domain Mame_00936 PF00171 Aldehyde dehydrogenase family Mame_00937 PF01575 MaoC like domain Mame_00941 PF01970 Tripartite tricarboxylate transporter TctA family Mame_00942 PF00485 Phosphoribulokinase / Uridine kinase family Mame_00943 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase Mame_00944 PF00977 Histidine biosynthesis protein Mame_00945 PF00977 Histidine biosynthesis protein Mame_00946 PF00117 Glutamine amidotransferase class-I Mame_00947 PF00475 Imidazoleglycerol-phosphate dehydratase Mame_00950 PF00227 Proteasome subunit Mame_00952 PF07724 AAA domain (Cdc48 subfamily) Mame_00952 PF00004 ATPase family associated with various cellular activities (AAA) Mame_00952 PF10431 C-terminal, D2-small domain, of ClpB protein Mame_00953 PF00248 Aldo/keto reductase family Mame_00954 PF01274 Malate synthase Mame_00955 PF07729 FCD domain Mame_00955 PF00392 Bacterial regulatory proteins, gntR family Mame_00956 PF00753 Metallo-beta-lactamase superfamily Mame_00959 PF13382 Adenine deaminase C-terminal domain Mame_00959 PF01979 Amidohydrolase family Mame_00963 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00964 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00967 PF03459 TOBE domain Mame_00967 PF00005 ABC transporter Mame_00968 PF00528 Binding-protein-dependent transport system inner membrane component Mame_00970 PF00703 Glycosyl hydrolases family 2 Mame_00970 PF02837 Glycosyl hydrolases family 2, sugar binding domain Mame_00970 PF02929 Beta galactosidase small chain Mame_00970 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Mame_00971 PF00005 ABC transporter Mame_00971 PF00664 ABC transporter transmembrane region Mame_00973 PF02028 BCCT, betaine/carnitine/choline family transporter Mame_00974 PF10609 NUBPL iron-transfer P-loop NTPase Mame_00975 PF08450 SMP-30/Gluconolactonase/LRE-like region Mame_00976 PF01119 DNA mismatch repair protein, C-terminal domain Mame_00976 PF08676 MutL C terminal dimerisation domain Mame_00980 PF03552 Cellulose synthase Mame_00980 PF00535 Glycosyl transferase family 2 Mame_00980 PF07238 PilZ domain Mame_00982 PF00480 ROK family Mame_00984 PF00072 Response regulator receiver domain Mame_00987 PF00459 Inositol monophosphatase family Mame_00988 PF00011 Hsp20/alpha crystallin family Mame_00991 PF05114 Protein of unknown function (DUF692) Mame_00993 PF01212 Beta-eliminating lyase Mame_00994 PF01645 Conserved region in glutamate synthase Mame_00994 PF01493 GXGXG motif Mame_00994 PF00310 Glutamine amidotransferases class-II Mame_00994 PF04898 Glutamate synthase central domain Mame_00996 PF01850 PIN domain Mame_00997 PF01906 Putative heavy-metal-binding Mame_00998 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_00998 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Mame_00999 PF00483 Nucleotidyl transferase Mame_01000 PF00571 CBS domain Mame_01000 PF01380 SIS domain Mame_01002 PF09335 SNARE associated Golgi protein Mame_01005 PF05532 CsbD-like Mame_01007 PF00072 Response regulator receiver domain Mame_01009 PF04542 Sigma-70 region 2 Mame_01009 PF08281 Sigma-70, region 4 Mame_01010 PF01494 FAD binding domain Mame_01012 PF00543 Nitrogen regulatory protein P-II Mame_01013 PF00909 Ammonium Transporter Family Mame_01016 PF00749 tRNA synthetases class I (E and Q), catalytic domain Mame_01017 PF03631 Virulence factor BrkB Mame_01018 PF00106 short chain dehydrogenase Mame_01019 PF01661 Macro domain Mame_01021 PF01923 Cobalamin adenosyltransferase Mame_01022 PF01012 Electron transfer flavoprotein domain Mame_01023 PF00766 Electron transfer flavoprotein FAD-binding domain Mame_01023 PF01012 Electron transfer flavoprotein domain Mame_01024 PF01894 Uncharacterised protein family UPF0047 Mame_01027 PF00144 Beta-lactamase Mame_01028 PF17912 MalK OB fold domain Mame_01028 PF00005 ABC transporter Mame_01030 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01032 PF00248 Aldo/keto reductase family Mame_01033 PF00248 Aldo/keto reductase family Mame_01035 PF01699 Sodium/calcium exchanger protein Mame_01037 PF17243 POTRA domain TamA domain 1 Mame_01037 PF07244 Surface antigen variable number repeat Mame_01037 PF01103 Surface antigen Mame_01039 PF00155 Aminotransferase class I and II Mame_01040 PF00144 Beta-lactamase Mame_01041 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain Mame_01041 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase Mame_01041 PF13288 DXP reductoisomerase C-terminal domain Mame_01042 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_01042 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_01043 PF09278 MerR, DNA binding Mame_01043 PF00376 MerR family regulatory protein Mame_01046 PF00009 Elongation factor Tu GTP binding domain Mame_01046 PF16658 Class II release factor RF3, C-terminal domain Mame_01046 PF03144 Elongation factor Tu domain 2 Mame_01047 PF00692 dUTPase Mame_01048 PF13194 Domain of unknown function (DUF4010) Mame_01049 PF00291 Pyridoxal-phosphate dependent enzyme Mame_01050 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_01052 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_01053 PF00072 Response regulator receiver domain Mame_01054 PF00672 HAMP domain Mame_01054 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_01054 PF01627 Hpt domain Mame_01054 PF00512 His Kinase A (phospho-acceptor) domain Mame_01054 PF17149 Periplasmic sensor domain found in signal transduction proteins Mame_01054 PF00072 Response regulator receiver domain Mame_01056 PF01554 MatE Mame_01057 PF01565 FAD binding domain Mame_01057 PF02913 FAD linked oxidases, C-terminal domain Mame_01058 PF03481 Putative GTP-binding controlling metal-binding Mame_01058 PF01300 Telomere recombination Mame_01060 PF00355 Rieske [2Fe-2S] domain Mame_01060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) Mame_01061 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_01061 PF00970 Oxidoreductase FAD-binding domain Mame_01061 PF00175 Oxidoreductase NAD-binding domain Mame_01062 PF00625 Guanylate kinase Mame_01063 PF07969 Amidohydrolase family Mame_01064 PF06299 Protein of unknown function (DUF1045) Mame_01066 PF01027 Inhibitor of apoptosis-promoting Bax1 Mame_01069 PF00005 ABC transporter Mame_01070 PF13472 GDSL-like Lipase/Acylhydrolase family Mame_01071 PF02834 LigT like Phosphoesterase Mame_01072 PF01451 Low molecular weight phosphotyrosine protein phosphatase Mame_01073 PF01329 Pterin 4 alpha carbinolamine dehydratase Mame_01080 PF00149 Calcineurin-like phosphoesterase Mame_01081 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_01082 PF11762 L-arabinose isomerase C-terminal domain Mame_01082 PF02610 L-arabinose isomerase Mame_01083 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_01084 PF02653 Branched-chain amino acid transport system / permease component Mame_01085 PF02653 Branched-chain amino acid transport system / permease component Mame_01086 PF00005 ABC transporter Mame_01087 PF13407 Periplasmic binding protein domain Mame_01088 PF03466 LysR substrate binding domain Mame_01088 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01089 PF00582 Universal stress protein family Mame_01097 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_01097 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_01098 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_01098 PF01266 FAD dependent oxidoreductase Mame_01099 PF07690 Major Facilitator Superfamily Mame_01101 PF00571 CBS domain Mame_01101 PF00478 IMP dehydrogenase / GMP reductase domain Mame_01105 PF14403 Circularly permuted ATP-grasp type 2 Mame_01105 PF04168 A predicted alpha-helical domain with a conserved ER motif. Mame_01106 PF14403 Circularly permuted ATP-grasp type 2 Mame_01107 PF00271 Helicase conserved C-terminal domain Mame_01107 PF00270 DEAD/DEAH box helicase Mame_01108 PF01266 FAD dependent oxidoreductase Mame_01108 PF05430 S-adenosyl-L-methionine-dependent methyltransferase Mame_01110 PF00107 Zinc-binding dehydrogenase Mame_01110 PF08240 Alcohol dehydrogenase GroES-like domain Mame_01112 PF00561 alpha/beta hydrolase fold Mame_01115 PF03561 Allantoicase repeat Mame_01116 PF04115 Ureidoglycolate lyase Mame_01117 PF00576 HIUase/Transthyretin family Mame_01119 PF01070 FMN-dependent dehydrogenase Mame_01120 PF01979 Amidohydrolase family Mame_01123 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Mame_01123 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Mame_01124 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_01124 PF01799 [2Fe-2S] binding domain Mame_01127 PF00557 Metallopeptidase family M24 Mame_01128 PF05992 SbmA/BacA-like family Mame_01131 PF01926 50S ribosome-binding GTPase Mame_01131 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal Mame_01136 PF00534 Glycosyl transferases group 1 Mame_01136 PF13439 Glycosyltransferase Family 4 Mame_01137 PF00128 Alpha amylase, catalytic domain Mame_01138 PF00230 Major intrinsic protein Mame_01139 PF01263 Aldose 1-epimerase Mame_01140 PF00202 Aminotransferase class-III Mame_01141 PF01022 Bacterial regulatory protein, arsR family Mame_01143 PF00571 CBS domain Mame_01143 PF00005 ABC transporter Mame_01144 PF00265 Thymidine kinase Mame_01145 PF03472 Autoinducer binding domain Mame_01145 PF00196 Bacterial regulatory proteins, luxR family Mame_01146 PF00390 Malic enzyme, N-terminal domain Mame_01146 PF03949 Malic enzyme, NAD binding domain Mame_01146 PF01515 Phosphate acetyl/butaryl transferase Mame_01147 PF07681 DoxX Mame_01148 PF00561 alpha/beta hydrolase fold Mame_01149 PF00990 Diguanylate cyclase, GGDEF domain Mame_01150 PF01728 FtsJ-like methyltransferase Mame_01151 PF02541 Ppx/GppA phosphatase family Mame_01156 PF03354 Phage Terminase Mame_01184 PF12951 Passenger-associated-transport-repeat Mame_01184 PF12951 Passenger-associated-transport-repeat Mame_01187 PF01545 Cation efflux family Mame_01189 PF00106 short chain dehydrogenase Mame_01190 PF12833 Helix-turn-helix domain Mame_01190 PF12852 Cupin Mame_01191 PF00199 Catalase Mame_01191 PF06628 Catalase-related immune-responsive Mame_01192 PF03466 LysR substrate binding domain Mame_01192 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01195 PF03352 Methyladenine glycosylase Mame_01196 PF03601 Conserved hypothetical protein 698 Mame_01197 PF03466 LysR substrate binding domain Mame_01197 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01199 PF13393 Histidyl-tRNA synthetase Mame_01199 PF03129 Anticodon binding domain Mame_01200 PF08173 Membrane bound YbgT-like protein Mame_01201 PF02322 Cytochrome bd terminal oxidase subunit II Mame_01202 PF01654 Cytochrome bd terminal oxidase subunit I Mame_01203 PF00005 ABC transporter Mame_01203 PF00664 ABC transporter transmembrane region Mame_01204 PF00664 ABC transporter transmembrane region Mame_01204 PF00005 ABC transporter Mame_01208 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01208 PF03466 LysR substrate binding domain Mame_01211 PF03466 LysR substrate binding domain Mame_01211 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01212 PF03466 LysR substrate binding domain Mame_01212 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01214 PF01380 SIS domain Mame_01215 PF01979 Amidohydrolase family Mame_01216 PF00999 Sodium/hydrogen exchanger family Mame_01216 PF02254 TrkA-N domain Mame_01217 PF01523 Putative modulator of DNA gyrase Mame_01218 PF00459 Inositol monophosphatase family Mame_01220 PF00534 Glycosyl transferases group 1 Mame_01220 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) Mame_01221 PF02606 Tetraacyldisaccharide-1-P 4'-kinase Mame_01223 PF00719 Inorganic pyrophosphatase Mame_01224 PF03435 Saccharopine dehydrogenase NADP binding domain Mame_01224 PF16653 Saccharopine dehydrogenase C-terminal domain Mame_01227 PF00117 Glutamine amidotransferase class-I Mame_01227 PF00425 chorismate binding enzyme Mame_01227 PF04715 Anthranilate synthase component I, N terminal region Mame_01229 PF05951 Bacterial protein of unknown function (DUF882) Mame_01230 PF01022 Bacterial regulatory protein, arsR family Mame_01231 PF00356 Bacterial regulatory proteins, lacI family Mame_01232 PF01547 Bacterial extracellular solute-binding protein Mame_01233 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01234 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01235 PF00128 Alpha amylase, catalytic domain Mame_01236 PF03459 TOBE domain Mame_01236 PF17912 MalK OB fold domain Mame_01236 PF00005 ABC transporter Mame_01237 PF13505 Outer membrane protein beta-barrel domain Mame_01238 PF00920 Dehydratase family Mame_01239 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Mame_01240 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Mame_01240 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Mame_01241 PF01266 FAD dependent oxidoreductase Mame_01242 PF00120 Glutamine synthetase, catalytic domain Mame_01248 PF00313 'Cold-shock' DNA-binding domain Mame_01249 PF01165 Ribosomal protein S21 Mame_01251 PF00296 Luciferase-like monooxygenase Mame_01252 PF01235 Sodium:alanine symporter family Mame_01253 PF01175 Urocanase Rossmann-like domain Mame_01253 PF17391 Urocanase N-terminal domain Mame_01253 PF17392 Urocanase C-terminal domain Mame_01255 PF00221 Aromatic amino acid lyase Mame_01256 PF01979 Amidohydrolase family Mame_01257 PF01979 Amidohydrolase family Mame_01259 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01260 PF00005 ABC transporter Mame_01261 PF07702 UTRA domain Mame_01261 PF00392 Bacterial regulatory proteins, gntR family Mame_01262 PF00300 Histidine phosphatase superfamily (branch 1) Mame_01263 PF05173 Dihydrodipicolinate reductase, C-terminus Mame_01263 PF01113 Dihydrodipicolinate reductase, N-terminus Mame_01264 PF02685 Glucokinase Mame_01265 PF03411 Penicillin-insensitive murein endopeptidase Mame_01266 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_01267 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01268 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01268 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_01269 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01269 PF00005 ABC transporter Mame_01271 PF02653 Branched-chain amino acid transport system / permease component Mame_01273 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_01273 PF00005 ABC transporter Mame_01274 PF00005 ABC transporter Mame_01275 PF01774 UreD urease accessory protein Mame_01276 PF00547 Urease, gamma subunit Mame_01277 PF00699 Urease beta subunit Mame_01279 PF01979 Amidohydrolase family Mame_01279 PF00449 Urease alpha-subunit, N-terminal domain Mame_01280 PF08534 Redoxin Mame_01281 PF05194 UreE urease accessory protein, C-terminal domain Mame_01281 PF02814 UreE urease accessory protein, N-terminal domain Mame_01282 PF01730 UreF Mame_01283 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_01285 PF00873 AcrB/AcrD/AcrF family Mame_01286 PF13533 Biotin-lipoyl like Mame_01287 PF09084 NMT1/THI5 like Mame_01288 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01289 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01291 PF00005 ABC transporter Mame_01292 PF00293 NUDIX domain Mame_01294 PF01979 Amidohydrolase family Mame_01296 PF04480 Protein of unknown function (DUF559) Mame_01297 PF01546 Peptidase family M20/M25/M40 Mame_01297 PF07687 Peptidase dimerisation domain Mame_01298 PF08362 YcdC-like protein, C-terminal region Mame_01298 PF00440 Bacterial regulatory proteins, tetR family Mame_01299 PF00563 EAL domain Mame_01299 PF00990 Diguanylate cyclase, GGDEF domain Mame_01299 PF03707 Bacterial signalling protein N terminal repeat Mame_01300 PF01180 Dihydroorotate dehydrogenase Mame_01301 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Mame_01301 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_01302 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_01305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Mame_01305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family Mame_01308 PF00593 TonB dependent receptor Mame_01308 PF07715 TonB-dependent Receptor Plug Domain Mame_01310 PF01032 FecCD transport family Mame_01311 PF00005 ABC transporter Mame_01312 PF00696 Amino acid kinase family Mame_01312 PF01842 ACT domain Mame_01312 PF13840 ACT domain Mame_01313 PF00391 PEP-utilising enzyme, mobile domain Mame_01313 PF05524 PEP-utilising enzyme, N-terminal Mame_01313 PF02896 PEP-utilising enzyme, TIM barrel domain Mame_01313 PF01590 GAF domain Mame_01314 PF03462 PCRF domain Mame_01314 PF00472 RF-1 domain Mame_01315 PF05175 Methyltransferase small domain Mame_01315 PF17827 PrmC N-terminal domain Mame_01317 PF02224 Cytidylate kinase Mame_01318 PF00575 S1 RNA binding domain Mame_01321 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Mame_01321 PF12838 4Fe-4S dicluster domain Mame_01321 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Mame_01321 PF00384 Molybdopterin oxidoreductase Mame_01321 PF01568 Molydopterin dinucleotide binding domain Mame_01322 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Mame_01322 PF00037 4Fe-4S binding domain Mame_01322 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Mame_01324 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01324 PF03466 LysR substrate binding domain Mame_01326 PF00535 Glycosyl transferase family 2 Mame_01329 PF01527 Transposase Mame_01330 PF13276 HTH-like domain Mame_01330 PF13683 Integrase core domain Mame_01331 PF05717 IS66 Orf2 like protein Mame_01332 PF13005 zinc-finger binding domain of transposase IS66 Mame_01332 PF13007 Transposase C of IS166 homeodomain Mame_01332 PF13817 IS66 C-terminal element Mame_01332 PF03050 Transposase IS66 family Mame_01337 PF01695 IstB-like ATP binding protein Mame_01344 PF00004 ATPase family associated with various cellular activities (AAA) Mame_01344 PF17862 AAA+ lid domain Mame_01344 PF01434 Peptidase family M41 Mame_01350 PF00589 Phage integrase family Mame_01353 PF00128 Alpha amylase, catalytic domain Mame_01354 PF00753 Metallo-beta-lactamase superfamily Mame_01355 PF00581 Rhodanese-like domain Mame_01355 PF00899 ThiF family Mame_01356 PF04102 SlyX Mame_01357 PF02463 RecF/RecN/SMC N terminal domain Mame_01358 PF00873 AcrB/AcrD/AcrF family Mame_01359 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_01361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01361 PF03466 LysR substrate binding domain Mame_01364 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Mame_01365 PF17912 MalK OB fold domain Mame_01365 PF00005 ABC transporter Mame_01366 PF07944 Beta-L-arabinofuranosidase, GH127 Mame_01367 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01368 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01369 PF01547 Bacterial extracellular solute-binding protein Mame_01370 PF00356 Bacterial regulatory proteins, lacI family Mame_01371 PF02777 Iron/manganese superoxide dismutases, C-terminal domain Mame_01371 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain Mame_01372 PF01011 PQQ enzyme repeat Mame_01373 PF10011 Predicted membrane protein (DUF2254) Mame_01374 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain Mame_01374 PF00326 Prolyl oligopeptidase family Mame_01377 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01379 PF03401 Tripartite tricarboxylate transporter family receptor Mame_01380 PF00005 ABC transporter Mame_01380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01381 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01381 PF00005 ABC transporter Mame_01383 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01384 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_01385 PF09856 Predicted transcriptional regulator (DUF2083) Mame_01385 PF06114 IrrE N-terminal-like domain Mame_01385 PF01381 Helix-turn-helix Mame_01386 PF00463 Isocitrate lyase family Mame_01389 PF03824 High-affinity nickel-transport protein Mame_01390 PF00005 ABC transporter Mame_01390 PF12857 TOBE-like domain Mame_01391 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01392 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01394 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_01394 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_01397 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_01397 PF00289 Biotin carboxylase, N-terminal domain Mame_01397 PF00364 Biotin-requiring enzyme Mame_01397 PF02785 Biotin carboxylase C-terminal domain Mame_01399 PF02798 Glutathione S-transferase, N-terminal domain Mame_01400 PF01039 Carboxyl transferase domain Mame_01401 PF01381 Helix-turn-helix Mame_01401 PF09856 Predicted transcriptional regulator (DUF2083) Mame_01401 PF06114 IrrE N-terminal-like domain Mame_01402 PF03466 LysR substrate binding domain Mame_01402 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01404 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Mame_01404 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Mame_01405 PF13508 Acetyltransferase (GNAT) domain Mame_01409 PF07670 Nucleoside recognition Mame_01409 PF02421 Ferrous iron transport protein B Mame_01409 PF07664 Ferrous iron transport protein B C terminus Mame_01411 PF00210 Ferritin-like domain Mame_01412 PF02614 Glucuronate isomerase Mame_01413 PF07729 FCD domain Mame_01413 PF00392 Bacterial regulatory proteins, gntR family Mame_01414 PF00294 pfkB family carbohydrate kinase Mame_01416 PF00171 Aldehyde dehydrogenase family Mame_01417 PF03167 Uracil DNA glycosylase superfamily Mame_01420 PF02653 Branched-chain amino acid transport system / permease component Mame_01421 PF09383 NIL domain Mame_01421 PF00005 ABC transporter Mame_01423 PF02525 Flavodoxin-like fold Mame_01425 PF07969 Amidohydrolase family Mame_01426 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01427 PF00005 ABC transporter Mame_01428 PF09084 NMT1/THI5 like Mame_01429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01429 PF03466 LysR substrate binding domain Mame_01430 PF02633 Creatinine amidohydrolase Mame_01432 PF00709 Adenylosuccinate synthetase Mame_01435 PF04542 Sigma-70 region 2 Mame_01435 PF00140 Sigma-70 factor, region 1.2 Mame_01435 PF04545 Sigma-70, region 4 Mame_01436 PF00849 RNA pseudouridylate synthase Mame_01438 PF00588 SpoU rRNA Methylase family Mame_01441 PF10090 Histidine phosphotransferase C-terminal domain Mame_01443 PF00486 Transcriptional regulatory protein, C terminal Mame_01443 PF00072 Response regulator receiver domain Mame_01448 PF00085 Thioredoxin Mame_01450 PF03966 Trm112p-like protein Mame_01456 PF13335 Magnesium chelatase, subunit ChlI C-terminal Mame_01456 PF01078 Magnesium chelatase, subunit ChlI Mame_01458 PF02951 Prokaryotic glutathione synthetase, N-terminal domain Mame_01458 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain Mame_01459 PF00005 ABC transporter Mame_01460 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01461 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01462 PF13416 Bacterial extracellular solute-binding protein Mame_01463 PF02021 Uncharacterised protein family UPF0102 Mame_01464 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Mame_01465 PF00712 DNA polymerase III beta subunit, N-terminal domain Mame_01465 PF02768 DNA polymerase III beta subunit, C-terminal domain Mame_01465 PF02767 DNA polymerase III beta subunit, central domain Mame_01466 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family Mame_01470 PF00210 Ferritin-like domain Mame_01471 PF00293 NUDIX domain Mame_01473 PF02600 Disulfide bond formation protein DsbB Mame_01474 PF01758 Sodium Bile acid symporter family Mame_01479 PF13662 Toprim domain Mame_01479 PF02132 RecR protein Mame_01481 PF02575 YbaB/EbfC DNA-binding family Mame_01482 PF12170 DNA polymerase III tau subunit V interacting with alpha Mame_01482 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding Mame_01482 PF12169 DNA polymerase III subunits gamma and tau domain III Mame_01483 PF04073 Aminoacyl-tRNA editing domain Mame_01485 PF01230 HIT domain Mame_01486 PF00293 NUDIX domain Mame_01486 PF09297 NADH pyrophosphatase zinc ribbon domain Mame_01488 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_01489 PF00800 Prephenate dehydratase Mame_01489 PF01817 Chorismate mutase type II Mame_01490 PF02348 Cytidylyltransferase Mame_01491 PF00034 Cytochrome c Mame_01494 PF00005 ABC transporter Mame_01496 PF00245 Alkaline phosphatase Mame_01499 PF00476 DNA polymerase family A Mame_01499 PF01612 3'-5' exonuclease Mame_01500 PF00004 ATPase family associated with various cellular activities (AAA) Mame_01500 PF07724 AAA domain (Cdc48 subfamily) Mame_01500 PF17871 AAA lid domain Mame_01500 PF10431 C-terminal, D2-small domain, of ClpB protein Mame_01500 PF02861 Clp amino terminal domain, pathogenicity island component Mame_01524 PF01548 Transposase Mame_01524 PF02371 Transposase IS116/IS110/IS902 family Mame_01528 PF13350 Tyrosine phosphatase family Mame_01529 PF01965 DJ-1/PfpI family Mame_01529 PF12833 Helix-turn-helix domain Mame_01534 PF01177 Asp/Glu/Hydantoin racemase Mame_01535 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_01536 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Mame_01537 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01540 PF03466 LysR substrate binding domain Mame_01541 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_01541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_01541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_01542 PF02780 Transketolase, C-terminal domain Mame_01542 PF02779 Transketolase, pyrimidine binding domain Mame_01543 PF00698 Acyl transferase domain Mame_01544 PF00392 Bacterial regulatory proteins, gntR family Mame_01544 PF07729 FCD domain Mame_01545 PF03401 Tripartite tricarboxylate transporter family receptor Mame_01547 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01549 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Mame_01549 PF08666 SAF domain Mame_01551 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01554 PF00486 Transcriptional regulatory protein, C terminal Mame_01554 PF00072 Response regulator receiver domain Mame_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_01555 PF00512 His Kinase A (phospho-acceptor) domain Mame_01555 PF08521 Two-component sensor kinase N-terminal Mame_01557 PF01070 FMN-dependent dehydrogenase Mame_01558 PF03737 Aldolase/RraA Mame_01559 PF01842 ACT domain Mame_01559 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_01559 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_01561 PF03401 Tripartite tricarboxylate transporter family receptor Mame_01563 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01564 PF07729 FCD domain Mame_01564 PF00392 Bacterial regulatory proteins, gntR family Mame_01566 PF02653 Branched-chain amino acid transport system / permease component Mame_01567 PF00005 ABC transporter Mame_01568 PF01636 Phosphotransferase enzyme family Mame_01569 PF01008 Initiation factor 2 subunit family Mame_01570 PF00456 Transketolase, thiamine diphosphate binding domain Mame_01571 PF02779 Transketolase, pyrimidine binding domain Mame_01571 PF02780 Transketolase, C-terminal domain Mame_01572 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Mame_01574 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_01575 PF00465 Iron-containing alcohol dehydrogenase Mame_01576 PF08361 MAATS-type transcriptional repressor, C-terminal region Mame_01576 PF00440 Bacterial regulatory proteins, tetR family Mame_01577 PF01575 MaoC like domain Mame_01578 PF00106 short chain dehydrogenase Mame_01580 PF00108 Thiolase, N-terminal domain Mame_01580 PF02803 Thiolase, C-terminal domain Mame_01583 PF02653 Branched-chain amino acid transport system / permease component Mame_01584 PF00005 ABC transporter Mame_01585 PF00005 ABC transporter Mame_01585 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_01587 PF00378 Enoyl-CoA hydratase/isomerase Mame_01588 PF13193 AMP-binding enzyme C-terminal domain Mame_01588 PF00501 AMP-binding enzyme Mame_01591 PF07730 Histidine kinase Mame_01591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_01592 PF00196 Bacterial regulatory proteins, luxR family Mame_01592 PF00072 Response regulator receiver domain Mame_01594 PF00005 ABC transporter Mame_01595 PF02653 Branched-chain amino acid transport system / permease component Mame_01597 PF00248 Aldo/keto reductase family Mame_01598 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_01598 PF01266 FAD dependent oxidoreductase Mame_01599 PF01791 DeoC/LacD family aldolase Mame_01600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_01600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_01601 PF00732 GMC oxidoreductase Mame_01601 PF05199 GMC oxidoreductase Mame_01605 PF08479 POTRA domain, ShlB-type Mame_01605 PF17287 POTRA domain Mame_01605 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB Mame_01606 PF05860 haemagglutination activity domain Mame_01606 PF13332 Hemagglutinin repeat Mame_01606 PF15526 Novel toxin 21 Mame_01606 PF04829 Pre-toxin domain with VENN motif Mame_01606 PF05594 Haemagluttinin repeat Mame_01608 PF01527 Transposase Mame_01609 PF02074 Carboxypeptidase Taq (M32) metallopeptidase Mame_01610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01610 PF00005 ABC transporter Mame_01611 PF00005 ABC transporter Mame_01611 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01612 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_01612 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01613 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01614 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_01620 PF01112 Asparaginase Mame_01626 PF01850 PIN domain Mame_01629 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_01633 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01633 PF03466 LysR substrate binding domain Mame_01634 PF01161 Phosphatidylethanolamine-binding protein Mame_01636 PF00392 Bacterial regulatory proteins, gntR family Mame_01636 PF00155 Aminotransferase class I and II Mame_01637 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Mame_01637 PF00117 Glutamine amidotransferase class-I Mame_01638 PF03475 3-alpha domain Mame_01638 PF03473 MOSC domain Mame_01639 PF08543 Phosphomethylpyrimidine kinase Mame_01640 PF08450 SMP-30/Gluconolactonase/LRE-like region Mame_01641 PF05853 beta-keto acid cleavage enzyme Mame_01642 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_01642 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_01644 PF02653 Branched-chain amino acid transport system / permease component Mame_01645 PF00005 ABC transporter Mame_01647 PF07729 FCD domain Mame_01647 PF00392 Bacterial regulatory proteins, gntR family Mame_01648 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01648 PF03466 LysR substrate binding domain Mame_01649 PF03060 Nitronate monooxygenase Mame_01654 PF00107 Zinc-binding dehydrogenase Mame_01654 PF08240 Alcohol dehydrogenase GroES-like domain Mame_01655 PF16925 Tetracyclin repressor-like, C-terminal domain Mame_01655 PF00440 Bacterial regulatory proteins, tetR family Mame_01656 PF00271 Helicase conserved C-terminal domain Mame_01656 PF00270 DEAD/DEAH box helicase Mame_01657 PF03841 L-seryl-tRNA selenium transferase Mame_01660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01660 PF00005 ABC transporter Mame_01661 PF00005 ABC transporter Mame_01661 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01662 PF01979 Amidohydrolase family Mame_01663 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01663 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_01664 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01667 PF00005 ABC transporter Mame_01668 PF01032 FecCD transport family Mame_01670 PF01209 ubiE/COQ5 methyltransferase family Mame_01678 PF01556 DnaJ C terminal domain Mame_01678 PF00226 DnaJ domain Mame_01681 PF00313 'Cold-shock' DNA-binding domain Mame_01682 PF00487 Fatty acid desaturase Mame_01683 PF00313 'Cold-shock' DNA-binding domain Mame_01688 PF00534 Glycosyl transferases group 1 Mame_01688 PF13579 Glycosyl transferase 4-like domain Mame_01692 PF00535 Glycosyl transferase family 2 Mame_01696 PF17912 MalK OB fold domain Mame_01696 PF00005 ABC transporter Mame_01697 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01698 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01702 PF07729 FCD domain Mame_01702 PF00392 Bacterial regulatory proteins, gntR family Mame_01703 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_01704 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_01704 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_01705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01705 PF03466 LysR substrate binding domain Mame_01714 PF01527 Transposase Mame_01715 PF13683 Integrase core domain Mame_01715 PF13276 HTH-like domain Mame_01716 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_01719 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01719 PF03466 LysR substrate binding domain Mame_01721 PF00106 short chain dehydrogenase Mame_01722 PF03746 LamB/YcsF family Mame_01724 PF02626 Carboxyltransferase domain, subdomain A and B Mame_01725 PF02682 Carboxyltransferase domain, subdomain C and D Mame_01726 PF02785 Biotin carboxylase C-terminal domain Mame_01726 PF00289 Biotin carboxylase, N-terminal domain Mame_01726 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_01727 PF00364 Biotin-requiring enzyme Mame_01728 PF03737 Aldolase/RraA Mame_01730 PF01202 Shikimate kinase Mame_01731 PF08240 Alcohol dehydrogenase GroES-like domain Mame_01731 PF00107 Zinc-binding dehydrogenase Mame_01732 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_01732 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_01734 PF04402 Protein of unknown function (DUF541) Mame_01735 PF13533 Biotin-lipoyl like Mame_01736 PF00005 ABC transporter Mame_01738 PF00684 DnaJ central domain Mame_01738 PF00226 DnaJ domain Mame_01738 PF01556 DnaJ C terminal domain Mame_01739 PF00012 Hsp70 protein Mame_01740 PF05221 S-adenosyl-L-homocysteine hydrolase Mame_01740 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain Mame_01743 PF01081 KDPG and KHG aldolase Mame_01752 PF13180 PDZ domain Mame_01752 PF03572 Peptidase family S41 Mame_01754 PF02590 Predicted SPOUT methyltransferase Mame_01757 PF01467 Cytidylyltransferase-like Mame_01758 PF00171 Aldehyde dehydrogenase family Mame_01759 PF01472 PUA domain Mame_01759 PF00696 Amino acid kinase family Mame_01760 PF01926 50S ribosome-binding GTPase Mame_01760 PF01018 GTP1/OBG Mame_01765 PF01016 Ribosomal L27 protein Mame_01766 PF00829 Ribosomal prokaryotic L21 protein Mame_01770 PF00589 Phage integrase family Mame_01771 PF00239 Resolvase, N terminal domain Mame_01771 PF02796 Helix-turn-helix domain of resolvase Mame_01773 PF04851 Type III restriction enzyme, res subunit Mame_01773 PF00271 Helicase conserved C-terminal domain Mame_01773 PF08463 EcoEI R protein C-terminal Mame_01773 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) Mame_01774 PF01420 Type I restriction modification DNA specificity domain Mame_01775 PF02384 N-6 DNA Methylase Mame_01775 PF12161 HsdM N-terminal domain Mame_01779 PF08402 TOBE domain Mame_01779 PF00005 ABC transporter Mame_01782 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01783 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase Mame_01787 PF08240 Alcohol dehydrogenase GroES-like domain Mame_01789 PF00690 Cation transporter/ATPase, N-terminus Mame_01789 PF00689 Cation transporting ATPase, C-terminus Mame_01795 PF02798 Glutathione S-transferase, N-terminal domain Mame_01795 PF00043 Glutathione S-transferase, C-terminal domain Mame_01796 PF01638 HxlR-like helix-turn-helix Mame_01797 PF12852 Cupin Mame_01797 PF12833 Helix-turn-helix domain Mame_01801 PF00202 Aminotransferase class-III Mame_01802 PF07883 Cupin domain Mame_01802 PF01381 Helix-turn-helix Mame_01803 PF03466 LysR substrate binding domain Mame_01803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01804 PF03737 Aldolase/RraA Mame_01806 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_01809 PF02682 Carboxyltransferase domain, subdomain C and D Mame_01810 PF02626 Carboxyltransferase domain, subdomain A and B Mame_01812 PF03746 LamB/YcsF family Mame_01813 PF00795 Carbon-nitrogen hydrolase Mame_01814 PF00392 Bacterial regulatory proteins, gntR family Mame_01814 PF00155 Aminotransferase class I and II Mame_01817 PF13276 HTH-like domain Mame_01817 PF13683 Integrase core domain Mame_01818 PF01527 Transposase Mame_01819 PF13276 HTH-like domain Mame_01819 PF13683 Integrase core domain Mame_01820 PF01527 Transposase Mame_01824 PF17912 MalK OB fold domain Mame_01824 PF00005 ABC transporter Mame_01825 PF07944 Beta-L-arabinofuranosidase, GH127 Mame_01826 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01827 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01828 PF13416 Bacterial extracellular solute-binding protein Mame_01829 PF00356 Bacterial regulatory proteins, lacI family Mame_01832 PF02615 Malate/L-lactate dehydrogenase Mame_01833 PF03401 Tripartite tricarboxylate transporter family receptor Mame_01834 PF02515 CoA-transferase family III Mame_01835 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01836 PF07331 Tripartite tricarboxylate transporter TctB family Mame_01837 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_01837 PF13378 Enolase C-terminal domain-like Mame_01838 PF13443 Cro/C1-type HTH DNA-binding domain Mame_01841 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_01841 PF00005 ABC transporter Mame_01843 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01844 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_01846 PF00465 Iron-containing alcohol dehydrogenase Mame_01847 PF00392 Bacterial regulatory proteins, gntR family Mame_01847 PF07729 FCD domain Mame_01848 PF17042 Nucleotide-binding C-terminal domain Mame_01848 PF07005 Sugar-binding N-terminal domain Mame_01849 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Mame_01850 PF00701 Dihydrodipicolinate synthetase family Mame_01851 PF00440 Bacterial regulatory proteins, tetR family Mame_01851 PF18665 Tetracyclin repressor-like, C-terminal domain Mame_01852 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_01852 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_01852 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_01853 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_01853 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_01853 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_01854 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_01854 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_01854 PF00378 Enoyl-CoA hydratase/isomerase Mame_01855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_01855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_01855 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_01856 PF02515 CoA-transferase family III Mame_01857 PF03401 Tripartite tricarboxylate transporter family receptor Mame_01858 PF01970 Tripartite tricarboxylate transporter TctA family Mame_01860 PF03466 LysR substrate binding domain Mame_01860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_01861 PF02690 Na+/Pi-cotransporter Mame_01862 PF00356 Bacterial regulatory proteins, lacI family Mame_01865 PF00459 Inositol monophosphatase family Mame_01866 PF00459 Inositol monophosphatase family Mame_01870 PF17912 MalK OB fold domain Mame_01870 PF00005 ABC transporter Mame_01871 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01872 PF05025 RbsD / FucU transport protein family Mame_01874 PF02656 Domain of unknown function (DUF202) Mame_01876 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Mame_01876 PF00384 Molybdopterin oxidoreductase Mame_01876 PF01568 Molydopterin dinucleotide binding domain Mame_01877 PF12800 4Fe-4S binding domain Mame_01877 PF13247 4Fe-4S dicluster domain Mame_01878 PF04976 DMSO reductase anchor subunit (DmsC) Mame_01879 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Mame_01881 PF00005 ABC transporter Mame_01882 PF01032 FecCD transport family Mame_01885 PF00005 ABC transporter Mame_01885 PF17912 MalK OB fold domain Mame_01886 PF00703 Glycosyl hydrolases family 2 Mame_01886 PF02836 Glycosyl hydrolases family 2, TIM barrel domain Mame_01886 PF02837 Glycosyl hydrolases family 2, sugar binding domain Mame_01886 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 Mame_01887 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01888 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01889 PF13416 Bacterial extracellular solute-binding protein Mame_01891 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01892 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01893 PF13416 Bacterial extracellular solute-binding protein Mame_01894 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase Mame_01894 PF00480 ROK family Mame_01898 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_01898 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_01899 PF00106 short chain dehydrogenase Mame_01900 PF02653 Branched-chain amino acid transport system / permease component Mame_01901 PF00005 ABC transporter Mame_01902 PF13407 Periplasmic binding protein domain Mame_01903 PF12833 Helix-turn-helix domain Mame_01904 PF00107 Zinc-binding dehydrogenase Mame_01904 PF08240 Alcohol dehydrogenase GroES-like domain Mame_01905 PF00356 Bacterial regulatory proteins, lacI family Mame_01906 PF07470 Glycosyl Hydrolase Family 88 Mame_01907 PF04962 KduI/IolB family Mame_01910 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01911 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01912 PF08402 TOBE domain Mame_01912 PF00005 ABC transporter Mame_01915 PF00356 Bacterial regulatory proteins, lacI family Mame_01916 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_01916 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_01918 PF13416 Bacterial extracellular solute-binding protein Mame_01920 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01921 PF17912 MalK OB fold domain Mame_01921 PF00005 ABC transporter Mame_01921 PF03459 TOBE domain Mame_01925 PF02899 Phage integrase, N-terminal SAM-like domain Mame_01925 PF00589 Phage integrase family Mame_01927 PF00270 DEAD/DEAH box helicase Mame_01927 PF17764 3′ DNA-binding domain (3′BD) Mame_01927 PF18074 Primosomal protein N C-terminal domain Mame_01927 PF18319 PriA DNA helicase Cys-rich region (CRR) domain Mame_01929 PF00213 ATP synthase delta (OSCP) subunit Mame_01930 PF02874 ATP synthase alpha/beta family, beta-barrel domain Mame_01930 PF00306 ATP synthase alpha/beta chain, C terminal domain Mame_01930 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Mame_01931 PF00231 ATP synthase Mame_01932 PF02874 ATP synthase alpha/beta family, beta-barrel domain Mame_01932 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain Mame_01933 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain Mame_01934 PF08447 PAS fold Mame_01934 PF00563 EAL domain Mame_01934 PF00990 Diguanylate cyclase, GGDEF domain Mame_01934 PF08448 PAS fold Mame_01936 PF07683 Cobalamin synthesis protein cobW C-terminal domain Mame_01936 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_01937 PF00356 Bacterial regulatory proteins, lacI family Mame_01938 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_01938 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_01939 PF18357 Diphteria toxin repressor SH3 domain Mame_01939 PF01325 Iron dependent repressor, N-terminal DNA binding domain Mame_01939 PF02742 Iron dependent repressor, metal binding and dimerisation domain Mame_01941 PF07722 Peptidase C26 Mame_01942 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_01943 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_01947 PF07690 Major Facilitator Superfamily Mame_01949 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Mame_01949 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Mame_01950 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch Mame_01951 PF02233 NAD(P) transhydrogenase beta subunit Mame_01958 PF01152 Bacterial-like globin Mame_01959 PF00455 DeoR C terminal sensor domain Mame_01959 PF08220 DeoR-like helix-turn-helix domain Mame_01960 PF01116 Fructose-bisphosphate aldolase class-II Mame_01961 PF00528 Binding-protein-dependent transport system inner membrane component Mame_01962 PF00989 PAS fold Mame_01962 PF00512 His Kinase A (phospho-acceptor) domain Mame_01962 PF13188 PAS domain Mame_01962 PF13426 PAS domain Mame_01962 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_01965 PF18412 Outer-membrane lipoprotein Wza C-terminal domain Mame_01965 PF10531 SLBB domain Mame_01965 PF02563 Polysaccharide biosynthesis/export protein Mame_01966 PF13416 Bacterial extracellular solute-binding protein Mame_01967 PF02082 Transcriptional regulator Mame_01968 PF00202 Aminotransferase class-III Mame_01969 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain Mame_01969 PF04616 Glycosyl hydrolases family 43 Mame_01970 PF01497 Periplasmic binding protein Mame_01971 PF00005 ABC transporter Mame_01972 PF01032 FecCD transport family Mame_01973 PF01032 FecCD transport family Mame_01974 PF01497 Periplasmic binding protein Mame_01975 PF02033 Ribosome-binding factor A Mame_01976 PF09157 Pseudouridine synthase II TruB, C-terminal Mame_01976 PF01509 TruB family pseudouridylate synthase (N terminal domain) Mame_01976 PF16198 tRNA pseudouridylate synthase B C-terminal domain Mame_01978 PF01645 Conserved region in glutamate synthase Mame_01979 PF13520 Amino acid permease Mame_01980 PF04379 ApaG domain Mame_01981 PF01053 Cys/Met metabolism PLP-dependent enzyme Mame_01983 PF00692 dUTPase Mame_01984 PF02325 YGGT family Mame_01986 PF00958 GMP synthase C terminal domain Mame_01986 PF00117 Glutamine amidotransferase class-I Mame_01991 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain Mame_01991 PF03900 Porphobilinogen deaminase, C-terminal domain Mame_01992 PF00814 Glycoprotease family Mame_01993 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Mame_01993 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus Mame_01997 PF03030 Inorganic H+ pyrophosphatase Mame_02002 PF02504 Fatty acid synthesis protein Mame_02003 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Mame_02003 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal Mame_02004 PF00216 Bacterial DNA-binding protein Mame_02005 PF13411 MerR HTH family regulatory protein Mame_02006 PF00689 Cation transporting ATPase, C-terminus Mame_02006 PF00690 Cation transporter/ATPase, N-terminus Mame_02007 PF03976 Polyphosphate kinase 2 (PPK2) Mame_02010 PF03781 Sulfatase-modifying factor enzyme 1 Mame_02011 PF00654 Voltage gated chloride channel Mame_02012 PF03061 Thioesterase superfamily Mame_02013 PF07886 BA14K-like protein Mame_02014 PF00850 Histone deacetylase domain Mame_02015 PF12680 SnoaL-like domain Mame_02015 PF04542 Sigma-70 region 2 Mame_02015 PF08281 Sigma-70, region 4 Mame_02016 PF02627 Carboxymuconolactone decarboxylase family Mame_02018 PF01381 Helix-turn-helix Mame_02018 PF07883 Cupin domain Mame_02019 PF03144 Elongation factor Tu domain 2 Mame_02019 PF00009 Elongation factor Tu GTP binding domain Mame_02019 PF00679 Elongation factor G C-terminus Mame_02019 PF06421 GTP-binding protein LepA C-terminus Mame_02020 PF01595 Cyclin M transmembrane N-terminal domain Mame_02020 PF03471 Transporter associated domain Mame_02020 PF00571 CBS domain Mame_02021 PF01761 3-dehydroquinate synthase Mame_02022 PF01202 Shikimate kinase Mame_02023 PF02899 Phage integrase, N-terminal SAM-like domain Mame_02023 PF00589 Phage integrase family Mame_02024 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit Mame_02026 PF00581 Rhodanese-like domain Mame_02026 PF01206 Sulfurtransferase TusA Mame_02027 PF07683 Cobalamin synthesis protein cobW C-terminal domain Mame_02027 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_02028 PF00768 D-alanyl-D-alanine carboxypeptidase Mame_02028 PF07943 Penicillin-binding protein 5, C-terminal domain Mame_02029 PF01546 Peptidase family M20/M25/M40 Mame_02029 PF07687 Peptidase dimerisation domain Mame_02036 PF04945 YHS domain Mame_02037 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family Mame_02039 PF06826 Predicted Permease Membrane Region Mame_02039 PF02080 TrkA-C domain Mame_02040 PF01699 Sodium/calcium exchanger protein Mame_02042 PF04632 Fusaric acid resistance protein family Mame_02043 PF00529 HlyD membrane-fusion protein of T1SS Mame_02043 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_02046 PF00221 Aromatic amino acid lyase Mame_02046 PF01979 Amidohydrolase family Mame_02048 PF00571 CBS domain Mame_02048 PF03448 MgtE intracellular N domain Mame_02048 PF01769 Divalent cation transporter Mame_02049 PF00282 Pyridoxal-dependent decarboxylase conserved domain Mame_02050 PF00072 Response regulator receiver domain Mame_02050 PF00196 Bacterial regulatory proteins, luxR family Mame_02051 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_02052 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02053 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02053 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_02054 PF00005 ABC transporter Mame_02055 PF00005 ABC transporter Mame_02055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_02056 PF08753 NikR C terminal nickel binding domain Mame_02056 PF01402 Ribbon-helix-helix protein, copG family Mame_02058 PF00547 Urease, gamma subunit Mame_02059 PF00699 Urease beta subunit Mame_02060 PF00449 Urease alpha-subunit, N-terminal domain Mame_02060 PF01979 Amidohydrolase family Mame_02061 PF05194 UreE urease accessory protein, C-terminal domain Mame_02061 PF02814 UreE urease accessory protein, N-terminal domain Mame_02062 PF01730 UreF Mame_02063 PF02492 CobW/HypB/UreG, nucleotide-binding domain Mame_02064 PF01774 UreD urease accessory protein Mame_02066 PF00909 Ammonium Transporter Family Mame_02069 PF00654 Voltage gated chloride channel Mame_02070 PF06826 Predicted Permease Membrane Region Mame_02070 PF02080 TrkA-C domain Mame_02072 PF00732 GMC oxidoreductase Mame_02072 PF05199 GMC oxidoreductase Mame_02073 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Mame_02073 PF00034 Cytochrome c Mame_02074 PF00312 Ribosomal protein S15 Mame_02075 PF00575 S1 RNA binding domain Mame_02075 PF00013 KH domain Mame_02075 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain Mame_02075 PF01138 3' exoribonuclease family, domain 1 Mame_02075 PF03725 3' exoribonuclease family, domain 2 Mame_02076 PF05175 Methyltransferase small domain Mame_02076 PF08468 Methyltransferase small domain N-terminal Mame_02079 PF03328 HpcH/HpaI aldolase/citrate lyase family Mame_02081 PF00694 Aconitase C-terminal domain Mame_02083 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Mame_02084 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit Mame_02085 PF02910 Fumarate reductase flavoprotein C-term Mame_02085 PF00890 FAD binding domain Mame_02088 PF13237 4Fe-4S dicluster domain Mame_02088 PF13085 2Fe-2S iron-sulfur cluster binding domain Mame_02089 PF02974 Protease inhibitor Inh Mame_02090 PF03969 AFG1-like ATPase Mame_02091 PF00056 lactate/malate dehydrogenase, NAD binding domain Mame_02091 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain Mame_02092 PF00549 CoA-ligase Mame_02092 PF08442 ATP-grasp domain Mame_02093 PF02629 CoA binding domain Mame_02093 PF00549 CoA-ligase Mame_02094 PF00676 Dehydrogenase E1 component Mame_02094 PF16078 2-oxoglutarate dehydrogenase N-terminus Mame_02094 PF02779 Transketolase, pyrimidine binding domain Mame_02094 PF16870 2-oxoglutarate dehydrogenase C-terminal Mame_02095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Mame_02095 PF00364 Biotin-requiring enzyme Mame_02095 PF02817 e3 binding domain Mame_02098 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_02098 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_02099 PF01292 Prokaryotic cytochrome b561 Mame_02100 PF00005 ABC transporter Mame_02100 PF17912 MalK OB fold domain Mame_02101 PF03358 NADPH-dependent FMN reductase Mame_02101 PF04205 FMN-binding domain Mame_02101 PF00890 FAD binding domain Mame_02102 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02104 PF01547 Bacterial extracellular solute-binding protein Mame_02107 PF02733 Dak1 domain Mame_02108 PF02734 DAK2 domain Mame_02109 PF02734 DAK2 domain Mame_02109 PF02733 Dak1 domain Mame_02111 PF13407 Periplasmic binding protein domain Mame_02112 PF02653 Branched-chain amino acid transport system / permease component Mame_02113 PF00005 ABC transporter Mame_02114 PF17912 MalK OB fold domain Mame_02114 PF00005 ABC transporter Mame_02116 PF00478 IMP dehydrogenase / GMP reductase domain Mame_02116 PF00571 CBS domain Mame_02118 PF02424 ApbE family Mame_02119 PF00175 Oxidoreductase NAD-binding domain Mame_02119 PF00970 Oxidoreductase FAD-binding domain Mame_02119 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_02120 PF02508 Rnf-Nqr subunit, membrane protein Mame_02121 PF02508 Rnf-Nqr subunit, membrane protein Mame_02122 PF04205 FMN-binding domain Mame_02123 PF03116 NQR2, RnfD, RnfE family Mame_02124 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) Mame_02124 PF11973 NQRA C-terminal domain Mame_02128 PF00753 Metallo-beta-lactamase superfamily Mame_02131 PF01970 Tripartite tricarboxylate transporter TctA family Mame_02133 PF00106 short chain dehydrogenase Mame_02134 PF03328 HpcH/HpaI aldolase/citrate lyase family Mame_02139 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) Mame_02139 PF00890 FAD binding domain Mame_02145 PF01619 Proline dehydrogenase Mame_02145 PF14850 DNA-binding domain of Proline dehydrogenase Mame_02145 PF18327 Proline utilization A proline dehydrogenase N-terminal domain Mame_02145 PF00171 Aldehyde dehydrogenase family Mame_02146 PF01037 Lrp/AsnC ligand binding domain Mame_02147 PF00356 Bacterial regulatory proteins, lacI family Mame_02147 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family Mame_02148 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_02148 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_02149 PF01418 Helix-turn-helix domain, rpiR family Mame_02149 PF01380 SIS domain Mame_02150 PF00294 pfkB family carbohydrate kinase Mame_02151 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_02151 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_02151 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_02152 PF01261 Xylose isomerase-like TIM barrel Mame_02153 PF04962 KduI/IolB family Mame_02155 PF01351 Ribonuclease HII Mame_02156 PF04055 Radical SAM superfamily Mame_02158 PF00994 Probable molybdopterin binding domain Mame_02159 PF00288 GHMP kinases N terminal domain Mame_02159 PF08544 GHMP kinases C terminal Mame_02161 PF00348 Polyprenyl synthetase Mame_02164 PF01343 Peptidase family S49 Mame_02164 PF06965 Na+/H+ antiporter 1 Mame_02166 PF00474 Sodium:solute symporter family Mame_02167 PF02091 Glycyl-tRNA synthetase alpha subunit Mame_02168 PF04011 LemA family Mame_02169 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Mame_02172 PF05746 DALR anticodon binding domain Mame_02172 PF02092 Glycyl-tRNA synthetase beta subunit Mame_02173 PF01609 Transposase DDE domain Mame_02173 PF13808 DDE_Tnp_1-associated Mame_02175 PF01040 UbiA prenyltransferase family Mame_02177 PF16921 Tex protein YqgF-like domain Mame_02177 PF17674 HHH domain Mame_02177 PF09371 Tex-like protein N-terminal domain Mame_02177 PF00575 S1 RNA binding domain Mame_02178 PF02844 Phosphoribosylglycinamide synthetase, N domain Mame_02178 PF02843 Phosphoribosylglycinamide synthetase, C domain Mame_02178 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain Mame_02179 PF09397 Ftsk gamma domain Mame_02179 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Mame_02179 PF17854 FtsK alpha domain Mame_02179 PF01580 FtsK/SpoIIIE family Mame_02180 PF03548 Outer membrane lipoprotein carrier protein LolA Mame_02181 PF03372 Endonuclease/Exonuclease/phosphatase family Mame_02183 PF03884 DNA gyrase inhibitor YacG Mame_02184 PF02545 Maf-like protein Mame_02185 PF01176 Translation initiation factor 1A / IF-1 Mame_02186 PF06793 Uncharacterised protein family (UPF0262) Mame_02189 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Mame_02195 PF00313 'Cold-shock' DNA-binding domain Mame_02196 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family Mame_02197 PF00582 Universal stress protein family Mame_02198 PF01740 STAS domain Mame_02198 PF00916 Sulfate permease family Mame_02199 PF02735 Ku70/Ku80 beta-barrel domain Mame_02200 PF13298 DNA polymerase Ligase (LigD) Mame_02200 PF01068 ATP dependent DNA ligase domain Mame_02200 PF04679 ATP dependent DNA ligase C terminal region Mame_02201 PF00183 Hsp90 protein Mame_02202 PF08534 Redoxin Mame_02203 PF00206 Lyase Mame_02203 PF14698 Argininosuccinate lyase C-terminal Mame_02204 PF01548 Transposase Mame_02204 PF02371 Transposase IS116/IS110/IS902 family Mame_02206 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain Mame_02206 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Mame_02209 PF02954 Bacterial regulatory protein, Fis family Mame_02209 PF00158 Sigma-54 interaction domain Mame_02209 PF00072 Response regulator receiver domain Mame_02210 PF00156 Phosphoribosyl transferase domain Mame_02211 PF00005 ABC transporter Mame_02215 PF04752 ChaC-like protein Mame_02217 PF02153 Prephenate dehydrogenase Mame_02218 PF00155 Aminotransferase class I and II Mame_02219 PF01209 ubiE/COQ5 methyltransferase family Mame_02220 PF00753 Metallo-beta-lactamase superfamily Mame_02220 PF16123 Hydroxyacylglutathione hydrolase C-terminus Mame_02224 PF00830 Ribosomal L28 family Mame_02225 PF02592 Putative vitamin uptake transporter Mame_02226 PF01232 Mannitol dehydrogenase Rossmann domain Mame_02226 PF08125 Mannitol dehydrogenase C-terminal domain Mame_02227 PF02806 Alpha amylase, C-terminal all-beta domain Mame_02227 PF00128 Alpha amylase, catalytic domain Mame_02231 PF06213 Cobalamin biosynthesis protein CobT Mame_02231 PF11775 Cobalamin biosynthesis protein CobT VWA domain Mame_02232 PF12556 Cobaltochelatase CobS subunit N terminal Mame_02232 PF07728 AAA domain (dynein-related subfamily) Mame_02232 PF08406 CbbQ/NirQ/NorQ C-terminal Mame_02233 PF00226 DnaJ domain Mame_02234 PF01722 BolA-like protein Mame_02235 PF05116 Sucrose-6F-phosphate phosphohydrolase Mame_02236 PF13439 Glycosyltransferase Family 4 Mame_02236 PF00534 Glycosyl transferases group 1 Mame_02237 PF05161 MOFRL family Mame_02237 PF13660 Domain of unknown function (DUF4147) Mame_02238 PF01522 Polysaccharide deacetylase Mame_02239 PF00180 Isocitrate/isopropylmalate dehydrogenase Mame_02240 PF01569 PAP2 superfamily Mame_02241 PF01569 PAP2 superfamily Mame_02242 PF02774 Semialdehyde dehydrogenase, dimerisation domain Mame_02242 PF01118 Semialdehyde dehydrogenase, NAD binding domain Mame_02243 PF00484 Carbonic anhydrase Mame_02244 PF12833 Helix-turn-helix domain Mame_02244 PF14525 AraC-binding-like domain Mame_02245 PF02515 CoA-transferase family III Mame_02247 PF01144 Coenzyme A transferase Mame_02248 PF03466 LysR substrate binding domain Mame_02248 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02249 PF12146 Serine aminopeptidase, S33 Mame_02251 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Mame_02251 PF00775 Dioxygenase Mame_02252 PF00775 Dioxygenase Mame_02253 PF10397 Adenylosuccinate lyase C-terminus Mame_02253 PF00206 Lyase Mame_02254 PF07859 alpha/beta hydrolase fold Mame_02255 PF08501 Shikimate dehydrogenase substrate binding domain Mame_02255 PF18317 Shikimate 5'-dehydrogenase C-terminal domain Mame_02256 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_02258 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_02259 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_02260 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Mame_02261 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_02262 PF01220 Dehydroquinase class II Mame_02263 PF00106 short chain dehydrogenase Mame_02264 PF00873 AcrB/AcrD/AcrF family Mame_02265 PF00529 HlyD membrane-fusion protein of T1SS Mame_02265 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_02271 PF00892 EamA-like transporter family Mame_02272 PF12697 Alpha/beta hydrolase family Mame_02273 PF00440 Bacterial regulatory proteins, tetR family Mame_02274 PF08359 YsiA-like protein, C-terminal region Mame_02274 PF00440 Bacterial regulatory proteins, tetR family Mame_02276 PF00106 short chain dehydrogenase Mame_02278 PF00857 Isochorismatase family Mame_02281 PF06719 AraC-type transcriptional regulator N-terminus Mame_02281 PF12833 Helix-turn-helix domain Mame_02284 PF00484 Carbonic anhydrase Mame_02285 PF08543 Phosphomethylpyrimidine kinase Mame_02286 PF05088 Bacterial NAD-glutamate dehydrogenase Mame_02288 PF02142 MGS-like domain Mame_02288 PF01808 AICARFT/IMPCHase bienzyme Mame_02290 PF01029 NusB family Mame_02290 PF01189 16S rRNA methyltransferase RsmB/F Mame_02291 PF01435 Peptidase family M48 Mame_02295 PF00005 ABC transporter Mame_02295 PF08402 TOBE domain Mame_02297 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02298 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02303 PF00920 Dehydratase family Mame_02304 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Mame_02304 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain Mame_02304 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Mame_02307 PF01050 Mannose-6-phosphate isomerase Mame_02307 PF00483 Nucleotidyl transferase Mame_02308 PF05048 Periplasmic copper-binding protein (NosD) Mame_02316 PF03050 Transposase IS66 family Mame_02316 PF13817 IS66 C-terminal element Mame_02316 PF13007 Transposase C of IS166 homeodomain Mame_02316 PF13005 zinc-finger binding domain of transposase IS66 Mame_02319 PF00356 Bacterial regulatory proteins, lacI family Mame_02321 PF12706 Beta-lactamase superfamily domain Mame_02324 PF08402 TOBE domain Mame_02324 PF00005 ABC transporter Mame_02325 PF03466 LysR substrate binding domain Mame_02325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02328 PF01970 Tripartite tricarboxylate transporter TctA family Mame_02332 PF01370 NAD dependent epimerase/dehydratase family Mame_02333 PF00107 Zinc-binding dehydrogenase Mame_02333 PF08240 Alcohol dehydrogenase GroES-like domain Mame_02336 PF00034 Cytochrome c Mame_02337 PF01322 Cytochrome C' Mame_02338 PF08543 Phosphomethylpyrimidine kinase Mame_02339 PF02581 Thiamine monophosphate synthase Mame_02340 PF02110 Hydroxyethylthiazole kinase family Mame_02342 PF00171 Aldehyde dehydrogenase family Mame_02343 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02343 PF03466 LysR substrate binding domain Mame_02345 PF04886 PT repeat Mame_02345 PF00593 TonB dependent receptor Mame_02345 PF07715 TonB-dependent Receptor Plug Domain Mame_02346 PF00162 Phosphoglycerate kinase Mame_02347 PF00999 Sodium/hydrogen exchanger family Mame_02347 PF02080 TrkA-C domain Mame_02347 PF03471 Transporter associated domain Mame_02348 PF07690 Major Facilitator Superfamily Mame_02349 PF00696 Amino acid kinase family Mame_02352 PF02469 Fasciclin domain Mame_02353 PF01926 50S ribosome-binding GTPase Mame_02354 PF02096 60Kd inner membrane protein Mame_02354 PF14849 YidC periplasmic domain Mame_02356 PF00512 His Kinase A (phospho-acceptor) domain Mame_02356 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_02356 PF00672 HAMP domain Mame_02356 PF13426 PAS domain Mame_02359 PF00072 Response regulator receiver domain Mame_02359 PF00990 Diguanylate cyclase, GGDEF domain Mame_02362 PF08032 RNA 2'-O ribose methyltransferase substrate binding Mame_02362 PF00588 SpoU rRNA Methylase family Mame_02365 PF00990 Diguanylate cyclase, GGDEF domain Mame_02366 PF00009 Elongation factor Tu GTP binding domain Mame_02366 PF03144 Elongation factor Tu domain 2 Mame_02366 PF03143 Elongation factor Tu C-terminal domain Mame_02368 PF01381 Helix-turn-helix Mame_02372 PF03652 Holliday junction resolvase Mame_02374 PF02686 Glu-tRNAGln amidotransferase C subunit Mame_02375 PF01425 Amidase Mame_02376 PF01551 Peptidase family M23 Mame_02377 PF01614 Bacterial transcriptional regulator Mame_02377 PF09339 IclR helix-turn-helix domain Mame_02378 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_02381 PF05199 GMC oxidoreductase Mame_02381 PF00732 GMC oxidoreductase Mame_02382 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_02382 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_02382 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_02386 PF01272 Transcription elongation factor, GreA/GreB, C-term Mame_02386 PF03449 Transcription elongation factor, N-terminal Mame_02387 PF07690 Major Facilitator Superfamily Mame_02388 PF18029 Glyoxalase-like domain Mame_02388 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_02389 PF01321 Creatinase/Prolidase N-terminal domain Mame_02389 PF00557 Metallopeptidase family M24 Mame_02393 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_02393 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain Mame_02393 PF02142 MGS-like domain Mame_02396 PF01699 Sodium/calcium exchanger protein Mame_02397 PF00043 Glutathione S-transferase, C-terminal domain Mame_02397 PF02798 Glutathione S-transferase, N-terminal domain Mame_02398 PF01554 MatE Mame_02399 PF10415 Fumarase C C-terminus Mame_02399 PF00206 Lyase Mame_02401 PF13419 Haloacid dehalogenase-like hydrolase Mame_02402 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) Mame_02404 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_02404 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_02407 PF01474 Class-II DAHP synthetase family Mame_02408 PF00795 Carbon-nitrogen hydrolase Mame_02408 PF02540 NAD synthase Mame_02409 PF07676 WD40-like Beta Propeller Repeat Mame_02411 PF02405 Permease MlaE Mame_02412 PF00005 ABC transporter Mame_02415 PF13419 Haloacid dehalogenase-like hydrolase Mame_02416 PF01370 NAD dependent epimerase/dehydratase family Mame_02416 PF08338 Domain of unknown function (DUF1731) Mame_02419 PF03061 Thioesterase superfamily Mame_02420 PF01618 MotA/TolQ/ExbB proton channel family Mame_02421 PF02472 Biopolymer transport protein ExbD/TolR Mame_02423 PF04052 TolB amino-terminal domain Mame_02423 PF07676 WD40-like Beta Propeller Repeat Mame_02424 PF00691 OmpA family Mame_02426 PF01171 PP-loop family Mame_02427 PF17862 AAA+ lid domain Mame_02427 PF00004 ATPase family associated with various cellular activities (AAA) Mame_02427 PF01434 Peptidase family M41 Mame_02427 PF06480 FtsH Extracellular Mame_02428 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Mame_02428 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Mame_02428 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Mame_02428 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Mame_02432 PF06610 L-alanine exporter Mame_02433 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_02433 PF01842 ACT domain Mame_02433 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_02434 PF03707 Bacterial signalling protein N terminal repeat Mame_02434 PF00990 Diguanylate cyclase, GGDEF domain Mame_02434 PF00563 EAL domain Mame_02437 PF09857 Putative toxin of bacterial toxin-antitoxin pair Mame_02438 PF02934 GatB/GatE catalytic domain Mame_02438 PF02637 GatB domain Mame_02440 PF00583 Acetyltransferase (GNAT) family Mame_02443 PF03588 Leucyl/phenylalanyl-tRNA protein transferase Mame_02444 PF00289 Biotin carboxylase, N-terminal domain Mame_02444 PF02785 Biotin carboxylase C-terminal domain Mame_02444 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain Mame_02445 PF00364 Biotin-requiring enzyme Mame_02446 PF01220 Dehydroquinase class II Mame_02448 PF00155 Aminotransferase class I and II Mame_02449 PF00575 S1 RNA binding domain Mame_02449 PF12111 Polyribonucleotide phosphorylase C terminal Mame_02449 PF00575 S1 RNA binding domain Mame_02449 PF10150 Ribonuclease E/G family Mame_02449 PF10150 Ribonuclease E/G family Mame_02449 PF12111 Polyribonucleotide phosphorylase C terminal Mame_02450 PF01520 N-acetylmuramoyl-L-alanine amidase Mame_02450 PF11741 AMIN domain Mame_02451 PF17092 Penicillin-binding protein OB-like domain Mame_02451 PF00912 Transglycosylase Mame_02451 PF00905 Penicillin binding protein transpeptidase domain Mame_02452 PF03462 PCRF domain Mame_02452 PF00472 RF-1 domain Mame_02454 PF13649 Methyltransferase domain Mame_02457 PF00365 Phosphofructokinase Mame_02458 PF12951 Passenger-associated-transport-repeat Mame_02459 PF06480 FtsH Extracellular Mame_02459 PF00004 ATPase family associated with various cellular activities (AAA) Mame_02459 PF17862 AAA+ lid domain Mame_02459 PF01434 Peptidase family M41 Mame_02460 PF12951 Passenger-associated-transport-repeat Mame_02461 PF06480 FtsH Extracellular Mame_02461 PF17862 AAA+ lid domain Mame_02461 PF01434 Peptidase family M41 Mame_02461 PF00004 ATPase family associated with various cellular activities (AAA) Mame_02462 PF05099 Tellurite resistance protein TerB Mame_02462 PF00226 DnaJ domain Mame_02466 PF02381 MraZ protein, putative antitoxin-like Mame_02467 PF01795 MraW methylase family Mame_02469 PF00905 Penicillin binding protein transpeptidase domain Mame_02469 PF03717 Penicillin-binding Protein dimerisation domain Mame_02470 PF02875 Mur ligase family, glutamate ligase domain Mame_02470 PF01225 Mur ligase family, catalytic domain Mame_02470 PF08245 Mur ligase middle domain Mame_02471 PF08245 Mur ligase middle domain Mame_02471 PF02875 Mur ligase family, glutamate ligase domain Mame_02471 PF01225 Mur ligase family, catalytic domain Mame_02472 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 Mame_02472 PF00953 Glycosyl transferase family 4 Mame_02473 PF08245 Mur ligase middle domain Mame_02474 PF01098 Cell cycle protein Mame_02475 PF04101 Glycosyltransferase family 28 C-terminal domain Mame_02475 PF03033 Glycosyltransferase family 28 N-terminal domain Mame_02476 PF01225 Mur ligase family, catalytic domain Mame_02476 PF02875 Mur ligase family, glutamate ligase domain Mame_02476 PF08245 Mur ligase middle domain Mame_02477 PF13808 DDE_Tnp_1-associated Mame_02477 PF01609 Transposase DDE domain Mame_02478 PF07478 D-ala D-ala ligase C-terminus Mame_02478 PF01820 D-ala D-ala ligase N-terminus Mame_02479 PF03799 Cell division protein FtsQ Mame_02479 PF08478 POTRA domain, FtsQ-type Mame_02480 PF02491 SHS2 domain inserted in FTSA Mame_02481 PF00091 Tubulin/FtsZ family, GTPase domain Mame_02481 PF12327 FtsZ family, C-terminal domain Mame_02482 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase Mame_02483 PF13525 Outer membrane lipoprotein Mame_02484 PF02463 RecF/RecN/SMC N terminal domain Mame_02485 PF13396 Phospholipase_D-nuclease N-terminal Mame_02485 PF13091 PLD-like domain Mame_02487 PF03120 NAD-dependent DNA ligase OB-fold domain Mame_02487 PF12826 Helix-hairpin-helix motif Mame_02487 PF03119 NAD-dependent DNA ligase C4 zinc finger domain Mame_02487 PF01653 NAD-dependent DNA ligase adenylation domain Mame_02487 PF00533 BRCA1 C Terminus (BRCT) domain Mame_02489 PF04828 Glutathione-dependent formaldehyde-activating enzyme Mame_02490 PF02630 SCO1/SenC Mame_02492 PF12833 Helix-turn-helix domain Mame_02492 PF01965 DJ-1/PfpI family Mame_02494 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02494 PF03466 LysR substrate binding domain Mame_02497 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_02497 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_02499 PF01565 FAD binding domain Mame_02499 PF02913 FAD linked oxidases, C-terminal domain Mame_02501 PF04304 Protein of unknown function (DUF454) Mame_02503 PF01547 Bacterial extracellular solute-binding protein Mame_02505 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02506 PF17912 MalK OB fold domain Mame_02506 PF00005 ABC transporter Mame_02508 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_02510 PF00248 Aldo/keto reductase family Mame_02511 PF01297 Zinc-uptake complex component A periplasmic Mame_02512 PF00005 ABC transporter Mame_02513 PF00950 ABC 3 transport family Mame_02515 PF00990 Diguanylate cyclase, GGDEF domain Mame_02515 PF00360 Phytochrome region Mame_02515 PF01590 GAF domain Mame_02515 PF00563 EAL domain Mame_02516 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_02517 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_02518 PF00990 Diguanylate cyclase, GGDEF domain Mame_02518 PF07694 5TMR of 5TMR-LYT Mame_02519 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_02519 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Mame_02520 PF01171 PP-loop family Mame_02521 PF04960 Glutaminase Mame_02522 PF03551 Transcriptional regulator PadR-like family Mame_02524 PF00581 Rhodanese-like domain Mame_02525 PF02272 DHHA1 domain Mame_02525 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Mame_02525 PF01411 tRNA synthetases class II (A) Mame_02526 PF00571 CBS domain Mame_02526 PF00291 Pyridoxal-phosphate dependent enzyme Mame_02527 PF00875 DNA photolyase Mame_02527 PF03441 FAD binding domain of DNA photolyase Mame_02528 PF01476 LysM domain Mame_02528 PF03734 L,D-transpeptidase catalytic domain Mame_02531 PF01042 Endoribonuclease L-PSP Mame_02534 PF12848 ABC transporter Mame_02534 PF00005 ABC transporter Mame_02536 PF02699 Preprotein translocase subunit Mame_02537 PF02355 Protein export membrane protein Mame_02537 PF07549 SecD/SecF GG Motif Mame_02541 PF01134 Glucose inhibited division protein A Mame_02542 PF09364 XFP N-terminal domain Mame_02542 PF09363 XFP C-terminal domain Mame_02542 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase Mame_02543 PF00871 Acetokinase family Mame_02546 PF02628 Cytochrome oxidase assembly protein Mame_02548 PF01418 Helix-turn-helix domain, rpiR family Mame_02548 PF01380 SIS domain Mame_02551 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_02552 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_02553 PF03951 Glutamine synthetase, beta-Grasp domain Mame_02553 PF00120 Glutamine synthetase, catalytic domain Mame_02555 PF00465 Iron-containing alcohol dehydrogenase Mame_02559 PF03129 Anticodon binding domain Mame_02559 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Mame_02560 PF02687 FtsX-like permease family Mame_02560 PF12704 MacB-like periplasmic core domain Mame_02561 PF00005 ABC transporter Mame_02570 PF13005 zinc-finger binding domain of transposase IS66 Mame_02570 PF13817 IS66 C-terminal element Mame_02570 PF03050 Transposase IS66 family Mame_02570 PF13007 Transposase C of IS166 homeodomain Mame_02571 PF05717 IS66 Orf2 like protein Mame_02595 PF03237 Terminase-like family Mame_02597 PF08461 Ribonuclease R winged-helix domain Mame_02611 PF13401 AAA domain Mame_02611 PF09077 Mu B transposition protein, C terminal Mame_02612 PF09299 Mu transposase, C-terminal Mame_02612 PF09039 Mu DNA binding, I gamma subdomain Mame_02612 PF02316 Mu DNA-binding domain Mame_02612 PF02914 Bacteriophage Mu transposase Mame_02621 PF00145 C-5 cytosine-specific DNA methylase Mame_02622 PF00512 His Kinase A (phospho-acceptor) domain Mame_02622 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_02627 PF09335 SNARE associated Golgi protein Mame_02628 PF02350 UDP-N-acetylglucosamine 2-epimerase Mame_02630 PF13632 Glycosyl transferase family group 2 Mame_02630 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain Mame_02632 PF03473 MOSC domain Mame_02632 PF03476 MOSC N-terminal beta barrel domain Mame_02632 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_02633 PF00924 Mechanosensitive ion channel Mame_02633 PF05552 Conserved TM helix Mame_02635 PF01966 HD domain Mame_02636 PF01571 Aminomethyltransferase folate-binding domain Mame_02638 PF00293 NUDIX domain Mame_02640 PF01066 CDP-alcohol phosphatidyltransferase Mame_02641 PF02666 Phosphatidylserine decarboxylase Mame_02642 PF00664 ABC transporter transmembrane region Mame_02642 PF00005 ABC transporter Mame_02644 PF03641 Possible lysine decarboxylase Mame_02645 PF00892 EamA-like transporter family Mame_02646 PF00682 HMGL-like Mame_02646 PF08502 LeuA allosteric (dimerisation) domain Mame_02650 PF01406 tRNA synthetases class I (C) catalytic domain Mame_02650 PF09190 DALR domain Mame_02653 PF07690 Major Facilitator Superfamily Mame_02655 PF00106 short chain dehydrogenase Mame_02656 PF00156 Phosphoribosyl transferase domain Mame_02656 PF13537 Glutamine amidotransferase domain Mame_02658 PF06745 KaiC Mame_02658 PF18073 Rubredoxin metal binding domain Mame_02659 PF01168 Alanine racemase, N-terminal domain Mame_02659 PF00842 Alanine racemase, C-terminal domain Mame_02660 PF03796 DnaB-like helicase C terminal domain Mame_02660 PF00772 DnaB-like helicase N terminal domain Mame_02662 PF03948 Ribosomal protein L9, C-terminal domain Mame_02662 PF01281 Ribosomal protein L9, N-terminal domain Mame_02664 PF01084 Ribosomal protein S18 Mame_02665 PF01250 Ribosomal protein S6 Mame_02667 PF04954 Siderophore-interacting protein Mame_02667 PF08021 Siderophore-interacting FAD-binding domain Mame_02668 PF01699 Sodium/calcium exchanger protein Mame_02669 PF00248 Aldo/keto reductase family Mame_02670 PF00698 Acyl transferase domain Mame_02672 PF00550 Phosphopantetheine attachment site Mame_02673 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_02673 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_02674 PF02618 YceG-like family Mame_02675 PF08340 Domain of unknown function (DUF1732) Mame_02675 PF03755 YicC-like family, N-terminal region Mame_02676 PF00625 Guanylate kinase Mame_02677 PF12411 Choline sulfatase enzyme C terminal Mame_02677 PF00884 Sulfatase Mame_02678 PF00294 pfkB family carbohydrate kinase Mame_02679 PF08402 TOBE domain Mame_02679 PF00005 ABC transporter Mame_02680 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02681 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02684 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_02684 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_02686 PF07733 Bacterial DNA polymerase III alpha NTPase domain Mame_02686 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Mame_02686 PF14579 Helix-hairpin-helix motif Mame_02686 PF02811 PHP domain Mame_02687 PF02530 Porin subfamily Mame_02689 PF08238 Sel1 repeat Mame_02691 PF00860 Permease family Mame_02692 PF01521 Iron-sulphur cluster biosynthesis Mame_02693 PF01966 HD domain Mame_02693 PF13286 Phosphohydrolase-associated domain Mame_02694 PF03485 Arginyl tRNA synthetase N terminal domain Mame_02694 PF00750 tRNA synthetases class I (R) Mame_02694 PF05746 DALR anticodon binding domain Mame_02696 PF00933 Glycosyl hydrolase family 3 N terminal domain Mame_02697 PF02616 Segregation and condensation protein ScpA Mame_02698 PF04079 Segregation and condensation complex subunit ScpB Mame_02699 PF00005 ABC transporter Mame_02699 PF08402 TOBE domain Mame_02700 PF02416 mttA/Hcf106 family Mame_02701 PF02416 mttA/Hcf106 family Mame_02702 PF00902 Sec-independent protein translocase protein (TatC) Mame_02707 PF00664 ABC transporter transmembrane region Mame_02707 PF03412 Peptidase C39 family Mame_02707 PF00005 ABC transporter Mame_02708 PF00664 ABC transporter transmembrane region Mame_02708 PF03412 Peptidase C39 family Mame_02708 PF00005 ABC transporter Mame_02712 PF02608 ABC transporter substrate-binding protein PnrA-like Mame_02713 PF01979 Amidohydrolase family Mame_02714 PF02798 Glutathione S-transferase, N-terminal domain Mame_02714 PF14497 Glutathione S-transferase, C-terminal domain Mame_02716 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_02716 PF00355 Rieske [2Fe-2S] domain Mame_02718 PF00186 Dihydrofolate reductase Mame_02719 PF01145 SPFH domain / Band 7 family Mame_02722 PF13180 PDZ domain Mame_02723 PF13302 Acetyltransferase (GNAT) domain Mame_02726 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_02726 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_02726 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_02727 PF10369 Small subunit of acetolactate synthase Mame_02730 PF02151 UvrB/uvrC motif Mame_02730 PF17757 UvrB interaction domain Mame_02730 PF04851 Type III restriction enzyme, res subunit Mame_02730 PF00271 Helicase conserved C-terminal domain Mame_02730 PF12344 Ultra-violet resistance protein B Mame_02732 PF03061 Thioesterase superfamily Mame_02734 PF02617 ATP-dependent Clp protease adaptor protein ClpS Mame_02735 PF17871 AAA lid domain Mame_02735 PF00004 ATPase family associated with various cellular activities (AAA) Mame_02735 PF07724 AAA domain (Cdc48 subfamily) Mame_02735 PF10431 C-terminal, D2-small domain, of ClpB protein Mame_02735 PF02861 Clp amino terminal domain, pathogenicity island component Mame_02737 PF04542 Sigma-70 region 2 Mame_02737 PF08281 Sigma-70, region 4 Mame_02739 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain Mame_02739 PF14490 Helix-hairpin-helix containing domain Mame_02739 PF13538 UvrD-like helicase C-terminal domain Mame_02740 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ Mame_02741 PF05368 NmrA-like family Mame_02742 PF01638 HxlR-like helix-turn-helix Mame_02745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase Mame_02746 PF01259 SAICAR synthetase Mame_02748 PF00994 Probable molybdopterin binding domain Mame_02748 PF03454 MoeA C-terminal region (domain IV) Mame_02748 PF03453 MoeA N-terminal region (domain I and II) Mame_02749 PF01967 MoaC family Mame_02750 PF00218 Indole-3-glycerol phosphate synthase Mame_02751 PF00591 Glycosyl transferase family, a/b domain Mame_02751 PF02885 Glycosyl transferase family, helical bundle domain Mame_02755 PF00793 DAHP synthetase I family Mame_02756 PF00113 Enolase, C-terminal TIM barrel domain Mame_02756 PF03952 Enolase, N-terminal domain Mame_02758 PF00676 Dehydrogenase E1 component Mame_02759 PF02779 Transketolase, pyrimidine binding domain Mame_02759 PF02780 Transketolase, C-terminal domain Mame_02759 PF00364 Biotin-requiring enzyme Mame_02760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Mame_02760 PF00364 Biotin-requiring enzyme Mame_02760 PF02817 e3 binding domain Mame_02763 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_02763 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_02765 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family Mame_02765 PF04055 Radical SAM superfamily Mame_02766 PF02537 CrcB-like protein, Camphor Resistance (CrcB) Mame_02767 PF01479 S4 domain Mame_02767 PF00849 RNA pseudouridylate synthase Mame_02768 PF13419 Haloacid dehalogenase-like hydrolase Mame_02770 PF00756 Putative esterase Mame_02771 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 Mame_02772 PF13673 Acetyltransferase (GNAT) domain Mame_02773 PF08240 Alcohol dehydrogenase GroES-like domain Mame_02773 PF00107 Zinc-binding dehydrogenase Mame_02775 PF03099 Biotin/lipoate A/B protein ligase family Mame_02777 PF03458 UPF0126 domain Mame_02778 PF02653 Branched-chain amino acid transport system / permease component Mame_02780 PF02653 Branched-chain amino acid transport system / permease component Mame_02782 PF00005 ABC transporter Mame_02786 PF00005 ABC transporter Mame_02787 PF00005 ABC transporter Mame_02788 PF13458 Periplasmic binding protein Mame_02789 PF00753 Metallo-beta-lactamase superfamily Mame_02791 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_02791 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_02793 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_02793 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_02795 PF00392 Bacterial regulatory proteins, gntR family Mame_02795 PF07729 FCD domain Mame_02798 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase Mame_02799 PF01925 Sulfite exporter TauE/SafE Mame_02800 PF01156 Inosine-uridine preferring nucleoside hydrolase Mame_02802 PF13545 Crp-like helix-turn-helix domain Mame_02802 PF00027 Cyclic nucleotide-binding domain Mame_02803 PF04055 Radical SAM superfamily Mame_02804 PF00550 Phosphopantetheine attachment site Mame_02805 PF07977 FabA-like domain Mame_02806 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_02806 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_02807 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_02807 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_02808 PF08240 Alcohol dehydrogenase GroES-like domain Mame_02808 PF00107 Zinc-binding dehydrogenase Mame_02811 PF12804 MobA-like NTP transferase domain Mame_02811 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_02812 PF01380 SIS domain Mame_02818 PF00303 Thymidylate synthase Mame_02819 PF00202 Aminotransferase class-III Mame_02820 PF00171 Aldehyde dehydrogenase family Mame_02821 PF01037 Lrp/AsnC ligand binding domain Mame_02822 PF00392 Bacterial regulatory proteins, gntR family Mame_02822 PF00155 Aminotransferase class I and II Mame_02823 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_02824 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Mame_02825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_02826 PF00582 Universal stress protein family Mame_02828 PF00291 Pyridoxal-phosphate dependent enzyme Mame_02829 PF02423 Ornithine cyclodeaminase/mu-crystallin family Mame_02830 PF00557 Metallopeptidase family M24 Mame_02830 PF01321 Creatinase/Prolidase N-terminal domain Mame_02831 PF08240 Alcohol dehydrogenase GroES-like domain Mame_02831 PF00107 Zinc-binding dehydrogenase Mame_02832 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_02832 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_02833 PF03437 BtpA family Mame_02834 PF00455 DeoR C terminal sensor domain Mame_02834 PF08220 DeoR-like helix-turn-helix domain Mame_02835 PF00106 short chain dehydrogenase Mame_02836 PF00005 ABC transporter Mame_02836 PF17912 MalK OB fold domain Mame_02837 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02838 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02840 PF13454 FAD-NAD(P)-binding Mame_02842 PF01979 Amidohydrolase family Mame_02844 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02844 PF03466 LysR substrate binding domain Mame_02845 PF02633 Creatinine amidohydrolase Mame_02846 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain Mame_02846 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Mame_02847 PF00005 ABC transporter Mame_02847 PF08402 TOBE domain Mame_02848 PF13416 Bacterial extracellular solute-binding protein Mame_02849 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02850 PF03466 LysR substrate binding domain Mame_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02852 PF00857 Isochorismatase family Mame_02854 PF01425 Amidase Mame_02856 PF01370 NAD dependent epimerase/dehydratase family Mame_02857 PF01979 Amidohydrolase family Mame_02858 PF03466 LysR substrate binding domain Mame_02858 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02860 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02861 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02862 PF01048 Phosphorylase superfamily Mame_02863 PF17912 MalK OB fold domain Mame_02863 PF00005 ABC transporter Mame_02866 PF02633 Creatinine amidohydrolase Mame_02867 PF02082 Transcriptional regulator Mame_02873 PF00593 TonB dependent receptor Mame_02873 PF07715 TonB-dependent Receptor Plug Domain Mame_02875 PF00664 ABC transporter transmembrane region Mame_02875 PF00005 ABC transporter Mame_02876 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_02876 PF00529 HlyD membrane-fusion protein of T1SS Mame_02877 PF13018 Extended Signal Peptide of Type V secretion system Mame_02878 PF00440 Bacterial regulatory proteins, tetR family Mame_02879 PF00593 TonB dependent receptor Mame_02879 PF07715 TonB-dependent Receptor Plug Domain Mame_02883 PF00561 alpha/beta hydrolase fold Mame_02887 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_02889 PF07690 Major Facilitator Superfamily Mame_02892 PF02678 Pirin Mame_02892 PF17954 Quercetinase C-terminal cupin domain Mame_02893 PF01738 Dienelactone hydrolase family Mame_02894 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_02895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_02895 PF03466 LysR substrate binding domain Mame_02896 PF03358 NADPH-dependent FMN reductase Mame_02897 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Mame_02897 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Mame_02897 PF00034 Cytochrome c Mame_02898 PF01799 [2Fe-2S] binding domain Mame_02898 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_02899 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Mame_02899 PF00034 Cytochrome c Mame_02899 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase Mame_02900 PF01494 FAD binding domain Mame_02901 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_02901 PF12804 MobA-like NTP transferase domain Mame_02904 PF12833 Helix-turn-helix domain Mame_02904 PF02311 AraC-like ligand binding domain Mame_02905 PF13533 Biotin-lipoyl like Mame_02908 PF00384 Molybdopterin oxidoreductase Mame_02909 PF00072 Response regulator receiver domain Mame_02909 PF00196 Bacterial regulatory proteins, luxR family Mame_02910 PF00520 Ion transport protein Mame_02910 PF00027 Cyclic nucleotide-binding domain Mame_02912 PF00196 Bacterial regulatory proteins, luxR family Mame_02912 PF00072 Response regulator receiver domain Mame_02913 PF00072 Response regulator receiver domain Mame_02913 PF00196 Bacterial regulatory proteins, luxR family Mame_02914 PF13426 PAS domain Mame_02914 PF08448 PAS fold Mame_02914 PF00512 His Kinase A (phospho-acceptor) domain Mame_02914 PF00072 Response regulator receiver domain Mame_02914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_02916 PF07969 Amidohydrolase family Mame_02922 PF03330 Lytic transglycolase Mame_02922 PF05036 Sporulation related domain Mame_02923 PF02223 Thymidylate kinase Mame_02924 PF12169 DNA polymerase III subunits gamma and tau domain III Mame_02925 PF09334 tRNA synthetases class I (M) Mame_02925 PF08264 Anticodon-binding domain of tRNA Mame_02926 PF01026 TatD related DNase Mame_02927 PF12706 Beta-lactamase superfamily domain Mame_02927 PF03099 Biotin/lipoate A/B protein ligase family Mame_02928 PF00005 ABC transporter Mame_02928 PF08402 TOBE domain Mame_02930 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02931 PF00528 Binding-protein-dependent transport system inner membrane component Mame_02937 PF04542 Sigma-70 region 2 Mame_02937 PF04545 Sigma-70, region 4 Mame_02938 PF12973 ChrR Cupin-like domain Mame_02940 PF01205 Uncharacterized protein family UPF0029 Mame_02942 PF05145 Transition state regulatory protein AbrB Mame_02945 PF02347 Glycine cleavage system P-protein Mame_02946 PF01597 Glycine cleavage H-protein Mame_02947 PF01571 Aminomethyltransferase folate-binding domain Mame_02947 PF08669 Glycine cleavage T-protein C-terminal barrel domain Mame_02949 PF03364 Polyketide cyclase / dehydrase and lipid transport Mame_02950 PF02464 Competence-damaged protein Mame_02951 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Mame_02951 PF02542 YgbB family Mame_02952 PF01207 Dihydrouridine synthase (Dus) Mame_02953 PF00512 His Kinase A (phospho-acceptor) domain Mame_02953 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_02953 PF00989 PAS fold Mame_02954 PF00158 Sigma-54 interaction domain Mame_02954 PF00072 Response regulator receiver domain Mame_02954 PF02954 Bacterial regulatory protein, Fis family Mame_02955 PF00989 PAS fold Mame_02955 PF00512 His Kinase A (phospho-acceptor) domain Mame_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_02955 PF00672 HAMP domain Mame_02956 PF02954 Bacterial regulatory protein, Fis family Mame_02956 PF00072 Response regulator receiver domain Mame_02956 PF00158 Sigma-54 interaction domain Mame_02957 PF02080 TrkA-C domain Mame_02957 PF02254 TrkA-N domain Mame_02958 PF17209 Hfq protein Mame_02959 PF01926 50S ribosome-binding GTPase Mame_02959 PF16360 GTP-binding GTPase Middle Region Mame_02959 PF13167 GTP-binding GTPase N-terminal Mame_02960 PF02627 Carboxymuconolactone decarboxylase family Mame_02961 PF13411 MerR HTH family regulatory protein Mame_02962 PF03819 MazG nucleotide pyrophosphohydrolase domain Mame_02964 PF10414 Sirohaem synthase dimerisation region Mame_02964 PF14824 Sirohaem biosynthesis protein central Mame_02964 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Mame_02966 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Mame_02966 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Mame_02968 PF00970 Oxidoreductase FAD-binding domain Mame_02968 PF00175 Oxidoreductase NAD-binding domain Mame_02969 PF00005 ABC transporter Mame_02969 PF12704 MacB-like periplasmic core domain Mame_02969 PF02687 FtsX-like permease family Mame_02970 PF12704 MacB-like periplasmic core domain Mame_02970 PF02687 FtsX-like permease family Mame_02970 PF00005 ABC transporter Mame_02971 PF13533 Biotin-lipoyl like Mame_02972 PF06776 Invasion associated locus B (IalB) protein Mame_02974 PF01702 Queuine tRNA-ribosyltransferase Mame_02975 PF02547 Queuosine biosynthesis protein Mame_02976 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Mame_02977 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Mame_02978 PF01467 Cytidylyltransferase-like Mame_02979 PF00521 DNA gyrase/topoisomerase IV, subunit A Mame_02979 PF03989 DNA gyrase C-terminal domain, beta-propeller Mame_02980 PF01914 MarC family integral membrane protein Mame_02981 PF00436 Single-strand binding protein family Mame_02982 PF17755 UvrA DNA-binding domain Mame_02982 PF17760 UvrA interaction domain Mame_02984 PF03853 YjeF-related protein N-terminus Mame_02984 PF01256 Carbohydrate kinase Mame_02985 PF00543 Nitrogen regulatory protein P-II Mame_02986 PF03951 Glutamine synthetase, beta-Grasp domain Mame_02986 PF00120 Glutamine synthetase, catalytic domain Mame_02989 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_02990 PF01323 DSBA-like thioredoxin domain Mame_02992 PF03461 TRCF domain Mame_02992 PF02559 CarD-like/TRCF domain Mame_02992 PF00270 DEAD/DEAH box helicase Mame_02992 PF00271 Helicase conserved C-terminal domain Mame_02992 PF17757 UvrB interaction domain Mame_02993 PF03937 Flavinator of succinate dehydrogenase Mame_02994 PF17191 RecG wedge domain Mame_02994 PF00271 Helicase conserved C-terminal domain Mame_02994 PF00270 DEAD/DEAH box helicase Mame_02997 PF13808 DDE_Tnp_1-associated Mame_02997 PF01609 Transposase DDE domain Mame_02999 PF01325 Iron dependent repressor, N-terminal DNA binding domain Mame_02999 PF02742 Iron dependent repressor, metal binding and dimerisation domain Mame_03000 PF01566 Natural resistance-associated macrophage protein Mame_03001 PF00440 Bacterial regulatory proteins, tetR family Mame_03001 PF08360 QacR-like protein, C-terminal region Mame_03002 PF01177 Asp/Glu/Hydantoin racemase Mame_03003 PF00588 SpoU rRNA Methylase family Mame_03004 PF16124 RecQ zinc-binding Mame_03004 PF00570 HRDC domain Mame_03004 PF00271 Helicase conserved C-terminal domain Mame_03004 PF00270 DEAD/DEAH box helicase Mame_03004 PF09382 RQC domain Mame_03007 PF00572 Ribosomal protein L13 Mame_03008 PF00380 Ribosomal protein S9/S16 Mame_03010 PF07729 FCD domain Mame_03010 PF00392 Bacterial regulatory proteins, gntR family Mame_03013 PF10458 Valyl tRNA synthetase tRNA binding arm Mame_03013 PF00133 tRNA synthetases class I (I, L, M and V) Mame_03013 PF08264 Anticodon-binding domain of tRNA Mame_03018 PF00924 Mechanosensitive ion channel Mame_03021 PF01546 Peptidase family M20/M25/M40 Mame_03022 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_03024 PF00005 ABC transporter Mame_03024 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_03025 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03025 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_03026 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03028 PF00196 Bacterial regulatory proteins, luxR family Mame_03028 PF00072 Response regulator receiver domain Mame_03029 PF01144 Coenzyme A transferase Mame_03030 PF01144 Coenzyme A transferase Mame_03031 PF02803 Thiolase, C-terminal domain Mame_03031 PF00108 Thiolase, N-terminal domain Mame_03033 PF01966 HD domain Mame_03034 PF00226 DnaJ domain Mame_03034 PF01556 DnaJ C terminal domain Mame_03034 PF00684 DnaJ central domain Mame_03035 PF00571 CBS domain Mame_03035 PF00005 ABC transporter Mame_03036 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03037 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Mame_03038 PF00083 Sugar (and other) transporter Mame_03039 PF00155 Aminotransferase class I and II Mame_03040 PF01037 Lrp/AsnC ligand binding domain Mame_03041 PF00585 C-terminal regulatory domain of Threonine dehydratase Mame_03041 PF00291 Pyridoxal-phosphate dependent enzyme Mame_03042 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain Mame_03042 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain Mame_03044 PF08447 PAS fold Mame_03044 PF00990 Diguanylate cyclase, GGDEF domain Mame_03044 PF08448 PAS fold Mame_03044 PF00563 EAL domain Mame_03044 PF13426 PAS domain Mame_03044 PF05231 MASE1 Mame_03045 PF00216 Bacterial DNA-binding protein Mame_03046 PF00004 ATPase family associated with various cellular activities (AAA) Mame_03046 PF02190 ATP-dependent protease La (LON) substrate-binding domain Mame_03046 PF05362 Lon protease (S16) C-terminal proteolytic domain Mame_03047 PF10431 C-terminal, D2-small domain, of ClpB protein Mame_03047 PF06689 ClpX C4-type zinc finger Mame_03047 PF07724 AAA domain (Cdc48 subfamily) Mame_03048 PF00574 Clp protease Mame_03049 PF17158 Membrane-associated sensor, integral membrane domain Mame_03049 PF00990 Diguanylate cyclase, GGDEF domain Mame_03050 PF01053 Cys/Met metabolism PLP-dependent enzyme Mame_03052 PF13380 CoA binding domain Mame_03054 PF12951 Passenger-associated-transport-repeat Mame_03055 PF12849 PBP superfamily domain Mame_03056 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03057 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03058 PF00005 ABC transporter Mame_03061 PF00883 Cytosol aminopeptidase family, catalytic domain Mame_03061 PF02789 Cytosol aminopeptidase family, N-terminal domain Mame_03062 PF01569 PAP2 superfamily Mame_03067 PF04166 Pyridoxal phosphate biosynthetic protein PdxA Mame_03068 PF00398 Ribosomal RNA adenine dimethylase Mame_03069 PF02565 Recombination protein O C terminal Mame_03069 PF11967 Recombination protein O N terminal Mame_03070 PF07650 KH domain Mame_03070 PF01926 50S ribosome-binding GTPase Mame_03071 PF14622 Ribonuclease-III-like Mame_03071 PF00035 Double-stranded RNA binding motif Mame_03072 PF10502 Signal peptidase, peptidase S26 Mame_03073 PF01648 4'-phosphopantetheinyl transferase superfamily Mame_03076 PF02824 TGS domain Mame_03076 PF04607 Region found in RelA / SpoT proteins Mame_03076 PF13291 ACT domain Mame_03077 PF01192 RNA polymerase Rpb6 Mame_03079 PF01668 SmpB protein Mame_03080 PF00701 Dihydrodipicolinate synthetase family Mame_03081 PF14718 Soluble lytic murein transglycosylase L domain Mame_03081 PF01464 Transglycosylase SLT domain Mame_03082 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain Mame_03082 PF01565 FAD binding domain Mame_03085 PF00313 'Cold-shock' DNA-binding domain Mame_03086 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_03089 PF01368 DHH family Mame_03089 PF17768 RecJ OB domain Mame_03089 PF02272 DHHA1 domain Mame_03090 PF00742 Homoserine dehydrogenase Mame_03090 PF03447 Homoserine dehydrogenase, NAD binding domain Mame_03090 PF01842 ACT domain Mame_03091 PF00550 Phosphopantetheine attachment site Mame_03093 PF00550 Phosphopantetheine attachment site Mame_03094 PF00155 Aminotransferase class I and II Mame_03097 PF03749 Sugar fermentation stimulation protein RE domain Mame_03097 PF17746 SfsA N-terminal OB domain Mame_03098 PF00557 Metallopeptidase family M24 Mame_03099 PF04002 RadC-like JAB domain Mame_03100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_03100 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_03101 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase Mame_03103 PF05698 Bacterial trigger factor protein (TF) C-terminus Mame_03103 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase Mame_03103 PF05697 Bacterial trigger factor protein (TF) Mame_03105 PF01513 ATP-NAD kinase Mame_03111 PF13683 Integrase core domain Mame_03111 PF13276 HTH-like domain Mame_03112 PF01527 Transposase Mame_03113 PF01527 Transposase Mame_03114 PF13276 HTH-like domain Mame_03114 PF13683 Integrase core domain Mame_03115 PF02190 ATP-dependent protease La (LON) substrate-binding domain Mame_03115 PF05362 Lon protease (S16) C-terminal proteolytic domain Mame_03115 PF00004 ATPase family associated with various cellular activities (AAA) Mame_03119 PF01695 IstB-like ATP binding protein Mame_03120 PF00665 Integrase core domain Mame_03125 PF03707 Bacterial signalling protein N terminal repeat Mame_03125 PF00563 EAL domain Mame_03125 PF00990 Diguanylate cyclase, GGDEF domain Mame_03126 PF03547 Membrane transport protein Mame_03127 PF02683 Cytochrome C biogenesis protein transmembrane region Mame_03130 PF02080 TrkA-C domain Mame_03130 PF03600 Citrate transporter Mame_03132 PF02567 Phenazine biosynthesis-like protein Mame_03136 PF02608 ABC transporter substrate-binding protein PnrA-like Mame_03139 PF00005 ABC transporter Mame_03141 PF01494 FAD binding domain Mame_03142 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Mame_03142 PF01872 RibD C-terminal domain Mame_03144 PF13439 Glycosyltransferase Family 4 Mame_03144 PF00534 Glycosyl transferases group 1 Mame_03146 PF00107 Zinc-binding dehydrogenase Mame_03146 PF08240 Alcohol dehydrogenase GroES-like domain Mame_03147 PF00925 GTP cyclohydrolase II Mame_03151 PF00873 AcrB/AcrD/AcrF family Mame_03158 PF00440 Bacterial regulatory proteins, tetR family Mame_03158 PF13977 BetI-type transcriptional repressor, C-terminal Mame_03159 PF01970 Tripartite tricarboxylate transporter TctA family Mame_03161 PF03401 Tripartite tricarboxylate transporter family receptor Mame_03164 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_03164 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_03165 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain Mame_03165 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Mame_03166 PF00717 Peptidase S24-like Mame_03166 PF01726 LexA DNA binding domain Mame_03167 PF00753 Metallo-beta-lactamase superfamily Mame_03167 PF03772 Competence protein Mame_03168 PF00285 Citrate synthase, C-terminal domain Mame_03169 PF02684 Lipid-A-disaccharide synthetase Mame_03171 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_03171 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Mame_03172 PF07977 FabA-like domain Mame_03173 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD Mame_03173 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_03174 PF01103 Surface antigen Mame_03174 PF07244 Surface antigen variable number repeat Mame_03175 PF02163 Peptidase family M50 Mame_03175 PF17820 PDZ domain Mame_03177 PF01255 Putative undecaprenyl diphosphate synthase Mame_03178 PF01765 Ribosome recycling factor Mame_03179 PF00696 Amino acid kinase family Mame_03180 PF00889 Elongation factor TS Mame_03181 PF00318 Ribosomal protein S2 Mame_03186 PF01230 HIT domain Mame_03187 PF02308 MgtC family Mame_03188 PF13514 AAA domain Mame_03189 PF00149 Calcineurin-like phosphoesterase Mame_03190 PF00248 Aldo/keto reductase family Mame_03192 PF00892 EamA-like transporter family Mame_03193 PF03466 LysR substrate binding domain Mame_03193 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03194 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_03195 PF01738 Dienelactone hydrolase family Mame_03196 PF03702 Anhydro-N-acetylmuramic acid kinase Mame_03198 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_03198 PF00005 ABC transporter Mame_03200 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03201 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_03202 PF13580 SIS domain Mame_03203 PF01418 Helix-turn-helix domain, rpiR family Mame_03203 PF01380 SIS domain Mame_03205 PF00916 Sulfate permease family Mame_03205 PF01740 STAS domain Mame_03206 PF00154 recA bacterial DNA recombination protein Mame_03207 PF02272 DHHA1 domain Mame_03207 PF01411 tRNA synthetases class II (A) Mame_03207 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Mame_03208 PF01207 Dihydrouridine synthase (Dus) Mame_03212 PF01958 Domain of unknown function DUF108 Mame_03212 PF03447 Homoserine dehydrogenase, NAD binding domain Mame_03213 PF00171 Aldehyde dehydrogenase family Mame_03214 PF00005 ABC transporter Mame_03215 PF00005 ABC transporter Mame_03215 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_03217 PF02653 Branched-chain amino acid transport system / permease component Mame_03219 PF03466 LysR substrate binding domain Mame_03219 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03221 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_03221 PF00107 Zinc-binding dehydrogenase Mame_03221 PF08240 Alcohol dehydrogenase GroES-like domain Mame_03221 PF08659 KR domain Mame_03221 PF00550 Phosphopantetheine attachment site Mame_03221 PF14765 Polyketide synthase dehydratase Mame_03221 PF16197 Ketoacyl-synthetase C-terminal extension Mame_03221 PF00698 Acyl transferase domain Mame_03221 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_03223 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_03223 PF00005 ABC transporter Mame_03225 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03226 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_03227 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_03227 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_03228 PF05853 beta-keto acid cleavage enzyme Mame_03230 PF07859 alpha/beta hydrolase fold Mame_03231 PF00892 EamA-like transporter family Mame_03234 PF13276 HTH-like domain Mame_03234 PF13333 Integrase core domain Mame_03234 PF00665 Integrase core domain Mame_03236 PF00884 Sulfatase Mame_03236 PF16347 Domain of unknown function (DUF4976) Mame_03237 PF00005 ABC transporter Mame_03237 PF17912 MalK OB fold domain Mame_03237 PF03459 TOBE domain Mame_03238 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03239 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03241 PF03466 LysR substrate binding domain Mame_03243 PF03707 Bacterial signalling protein N terminal repeat Mame_03243 PF00990 Diguanylate cyclase, GGDEF domain Mame_03243 PF13188 PAS domain Mame_03243 PF00563 EAL domain Mame_03245 PF00873 AcrB/AcrD/AcrF family Mame_03246 PF00486 Transcriptional regulatory protein, C terminal Mame_03246 PF00072 Response regulator receiver domain Mame_03247 PF00512 His Kinase A (phospho-acceptor) domain Mame_03247 PF00672 HAMP domain Mame_03247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03250 PF01266 FAD dependent oxidoreductase Mame_03252 PF03466 LysR substrate binding domain Mame_03252 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03253 PF03466 LysR substrate binding domain Mame_03253 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03254 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_03254 PF01266 FAD dependent oxidoreductase Mame_03255 PF00497 Bacterial extracellular solute-binding proteins, family 3 Mame_03255 PF01464 Transglycosylase SLT domain Mame_03256 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03257 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03258 PF00005 ABC transporter Mame_03259 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Mame_03260 PF01513 ATP-NAD kinase Mame_03262 PF00293 NUDIX domain Mame_03263 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ Mame_03264 PF00043 Glutathione S-transferase, C-terminal domain Mame_03264 PF13417 Glutathione S-transferase, N-terminal domain Mame_03265 PF13505 Outer membrane protein beta-barrel domain Mame_03267 PF12826 Helix-hairpin-helix motif Mame_03267 PF01541 GIY-YIG catalytic domain Mame_03267 PF08459 UvrC Helix-hairpin-helix N-terminal Mame_03267 PF02151 UvrB/uvrC motif Mame_03268 PF01066 CDP-alcohol phosphatidyltransferase Mame_03269 PF02597 ThiS family Mame_03270 PF02391 MoaE protein Mame_03271 PF01965 DJ-1/PfpI family Mame_03272 PF00334 Nucleoside diphosphate kinase Mame_03273 PF13417 Glutathione S-transferase, N-terminal domain Mame_03276 PF02219 Methylenetetrahydrofolate reductase Mame_03277 PF03551 Transcriptional regulator PadR-like family Mame_03277 PF13847 Methyltransferase domain Mame_03278 PF01551 Peptidase family M23 Mame_03280 PF01975 Survival protein SurE Mame_03281 PF02403 Seryl-tRNA synthetase N-terminal domain Mame_03281 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Mame_03282 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_03283 PF03466 LysR substrate binding domain Mame_03283 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03284 PF01266 FAD dependent oxidoreductase Mame_03286 PF17806 Sarcosine oxidase A3 domain Mame_03286 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_03287 PF01266 FAD dependent oxidoreductase Mame_03288 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_03290 PF00005 ABC transporter Mame_03292 PF00005 ABC transporter Mame_03293 PF02653 Branched-chain amino acid transport system / permease component Mame_03294 PF02734 DAK2 domain Mame_03294 PF02733 Dak1 domain Mame_03297 PF00294 pfkB family carbohydrate kinase Mame_03298 PF08402 TOBE domain Mame_03298 PF00005 ABC transporter Mame_03299 PF14698 Argininosuccinate lyase C-terminal Mame_03299 PF00206 Lyase Mame_03300 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03301 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03302 PF13416 Bacterial extracellular solute-binding protein Mame_03303 PF00480 ROK family Mame_03308 PF00107 Zinc-binding dehydrogenase Mame_03308 PF08240 Alcohol dehydrogenase GroES-like domain Mame_03309 PF04227 Indigoidine synthase A like protein Mame_03310 PF00294 pfkB family carbohydrate kinase Mame_03310 PF01467 Cytidylyltransferase-like Mame_03311 PF00180 Isocitrate/isopropylmalate dehydrogenase Mame_03313 PF00171 Aldehyde dehydrogenase family Mame_03315 PF02798 Glutathione S-transferase, N-terminal domain Mame_03315 PF00043 Glutathione S-transferase, C-terminal domain Mame_03317 PF00809 Pterin binding enzyme Mame_03317 PF02310 B12 binding domain Mame_03317 PF02574 Homocysteine S-methyltransferase Mame_03317 PF02965 Vitamin B12 dependent methionine synthase, activation domain Mame_03317 PF02607 B12 binding domain Mame_03319 PF01118 Semialdehyde dehydrogenase, NAD binding domain Mame_03320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Mame_03320 PF17770 Ribonuclease J C-terminal domain Mame_03320 PF12706 Beta-lactamase superfamily domain Mame_03321 PF02237 Biotin protein ligase C terminal domain Mame_03321 PF03099 Biotin/lipoate A/B protein ligase family Mame_03322 PF00361 Proton-conducting membrane transporter Mame_03323 PF00361 Proton-conducting membrane transporter Mame_03324 PF00361 Proton-conducting membrane transporter Mame_03324 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Mame_03325 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Mame_03326 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Mame_03327 PF12838 4Fe-4S dicluster domain Mame_03328 PF00146 NADH dehydrogenase Mame_03329 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal Mame_03329 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Mame_03329 PF00384 Molybdopterin oxidoreductase Mame_03331 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region Mame_03331 PF10531 SLBB domain Mame_03331 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit Mame_03333 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit Mame_03334 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Mame_03335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit Mame_03336 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Mame_03341 PF00291 Pyridoxal-phosphate dependent enzyme Mame_03341 PF00585 C-terminal regulatory domain of Threonine dehydratase Mame_03342 PF02386 Cation transport protein Mame_03343 PF00586 AIR synthase related protein, N-terminal domain Mame_03343 PF02769 AIR synthase related protein, C-terminal domain Mame_03343 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain Mame_03344 PF01722 BolA-like protein Mame_03345 PF00462 Glutaredoxin Mame_03346 PF07690 Major Facilitator Superfamily Mame_03350 PF00459 Inositol monophosphatase family Mame_03351 PF01479 S4 domain Mame_03351 PF00163 Ribosomal protein S4/S9 N-terminal domain Mame_03353 PF01262 Alanine dehydrogenase/PNT, C-terminal domain Mame_03353 PF05222 Alanine dehydrogenase/PNT, N-terminal domain Mame_03354 PF01037 Lrp/AsnC ligand binding domain Mame_03356 PF02872 5'-nucleotidase, C-terminal domain Mame_03356 PF00149 Calcineurin-like phosphoesterase Mame_03358 PF00072 Response regulator receiver domain Mame_03358 PF08448 PAS fold Mame_03358 PF00512 His Kinase A (phospho-acceptor) domain Mame_03358 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03358 PF13188 PAS domain Mame_03360 PF01258 Prokaryotic dksA/traR C4-type zinc finger Mame_03362 PF04317 YcjX-like family, DUF463 Mame_03363 PF05128 Domain of unknown function (DUF697) Mame_03365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) Mame_03366 PF02152 Dihydroneopterin aldolase Mame_03367 PF00809 Pterin binding enzyme Mame_03368 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_03371 PF00291 Pyridoxal-phosphate dependent enzyme Mame_03371 PF14821 Threonine synthase N terminus Mame_03372 PF05193 Peptidase M16 inactive domain Mame_03372 PF00675 Insulinase (Peptidase family M16) Mame_03374 PF03707 Bacterial signalling protein N terminal repeat Mame_03374 PF00563 EAL domain Mame_03374 PF00990 Diguanylate cyclase, GGDEF domain Mame_03375 PF10005 zinc-ribbon domain Mame_03375 PF15887 Putative zinc-binding metallo-peptidase Mame_03376 PF02622 Uncharacterized ACR, COG1678 Mame_03378 PF08534 Redoxin Mame_03381 PF00075 RNase H Mame_03382 PF01636 Phosphotransferase enzyme family Mame_03383 PF02401 LytB protein Mame_03385 PF02104 SURF1 family Mame_03388 PF00510 Cytochrome c oxidase subunit III Mame_03389 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 Mame_03391 PF01040 UbiA prenyltransferase family Mame_03392 PF00115 Cytochrome C and Quinol oxidase polypeptide I Mame_03393 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Mame_03393 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Mame_03395 PF01523 Putative modulator of DNA gyrase Mame_03398 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_03398 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_03400 PF03928 Haem-degrading Mame_03401 PF01243 Pyridoxamine 5'-phosphate oxidase Mame_03401 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region Mame_03403 PF00300 Histidine phosphatase superfamily (branch 1) Mame_03404 PF01264 Chorismate synthase Mame_03406 PF17151 Periplasmic sensor domain Mame_03406 PF00990 Diguanylate cyclase, GGDEF domain Mame_03408 PF00471 Ribosomal protein L33 Mame_03409 PF00999 Sodium/hydrogen exchanger family Mame_03412 PF00534 Glycosyl transferases group 1 Mame_03412 PF13477 Glycosyl transferase 4-like Mame_03413 PF01037 Lrp/AsnC ligand binding domain Mame_03414 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_03415 PF03466 LysR substrate binding domain Mame_03415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03416 PF00724 NADH:flavin oxidoreductase / NADH oxidase family Mame_03417 PF01699 Sodium/calcium exchanger protein Mame_03418 PF00106 short chain dehydrogenase Mame_03419 PF03466 LysR substrate binding domain Mame_03419 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03423 PF07995 Glucose / Sorbosone dehydrogenase Mame_03425 PF00313 'Cold-shock' DNA-binding domain Mame_03426 PF04546 Sigma-70, non-essential region Mame_03426 PF03979 Sigma-70 factor, region 1.1 Mame_03426 PF00140 Sigma-70 factor, region 1.2 Mame_03426 PF04542 Sigma-70 region 2 Mame_03426 PF04545 Sigma-70, region 4 Mame_03426 PF04539 Sigma-70 region 3 Mame_03427 PF10410 DnaB-helicase binding domain of primase Mame_03427 PF08278 DNA primase DnaG DnaB-binding Mame_03427 PF08275 DNA primase catalytic core, N-terminal domain Mame_03427 PF01807 CHC2 zinc finger Mame_03429 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain Mame_03429 PF00117 Glutamine amidotransferase class-I Mame_03433 PF01699 Sodium/calcium exchanger protein Mame_03436 PF01883 Iron-sulfur cluster assembly protein Mame_03437 PF00266 Aminotransferase class-V Mame_03438 PF01458 Uncharacterized protein family (UPF0051) Mame_03439 PF00005 ABC transporter Mame_03441 PF01458 Uncharacterized protein family (UPF0051) Mame_03442 PF00266 Aminotransferase class-V Mame_03443 PF02129 X-Pro dipeptidyl-peptidase (S15 family) Mame_03446 PF00579 tRNA synthetases class I (W and Y) Mame_03448 PF00578 AhpC/TSA family Mame_03449 PF00271 Helicase conserved C-terminal domain Mame_03449 PF00270 DEAD/DEAH box helicase Mame_03450 PF01613 Flavin reductase like domain Mame_03451 PF13458 Periplasmic binding protein Mame_03452 PF00834 Ribulose-phosphate 3 epimerase family Mame_03454 PF00206 Lyase Mame_03454 PF10397 Adenylosuccinate lyase C-terminus Mame_03456 PF08447 PAS fold Mame_03456 PF08448 PAS fold Mame_03456 PF00990 Diguanylate cyclase, GGDEF domain Mame_03456 PF00563 EAL domain Mame_03457 PF06418 CTP synthase N-terminus Mame_03457 PF00117 Glutamine amidotransferase class-I Mame_03458 PF03840 Preprotein translocase SecG subunit Mame_03459 PF00121 Triosephosphate isomerase Mame_03460 PF00204 DNA gyrase B Mame_03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03460 PF00986 DNA gyrase B subunit, carboxyl terminus Mame_03460 PF01751 Toprim domain Mame_03462 PF01734 Patatin-like phospholipase Mame_03464 PF17969 L,D-transpeptidase C-terminal domain Mame_03464 PF03734 L,D-transpeptidase catalytic domain Mame_03468 PF01613 Flavin reductase like domain Mame_03471 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) Mame_03472 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) Mame_03473 PF03129 Anticodon binding domain Mame_03473 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain Mame_03473 PF02824 TGS domain Mame_03473 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) Mame_03475 PF13404 AsnC-type helix-turn-helix domain Mame_03475 PF01037 Lrp/AsnC ligand binding domain Mame_03476 PF03167 Uracil DNA glycosylase superfamily Mame_03477 PF00512 His Kinase A (phospho-acceptor) domain Mame_03477 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03479 PF01219 Prokaryotic diacylglycerol kinase Mame_03480 PF02277 Phosphoribosyltransferase Mame_03481 PF02654 Cobalamin-5-phosphate synthase Mame_03483 PF01925 Sulfite exporter TauE/SafE Mame_03485 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_03485 PF06426 Serine acetyltransferase, N-terminal Mame_03486 PF00561 alpha/beta hydrolase fold Mame_03488 PF01494 FAD binding domain Mame_03490 PF01053 Cys/Met metabolism PLP-dependent enzyme Mame_03491 PF00497 Bacterial extracellular solute-binding proteins, family 3 Mame_03492 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03493 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03494 PF00005 ABC transporter Mame_03499 PF01197 Ribosomal protein L31 Mame_03500 PF00005 ABC transporter Mame_03500 PF00664 ABC transporter transmembrane region Mame_03501 PF00892 EamA-like transporter family Mame_03503 PF00691 OmpA family Mame_03503 PF01389 OmpA-like transmembrane domain Mame_03505 PF00459 Inositol monophosphatase family Mame_03506 PF00990 Diguanylate cyclase, GGDEF domain Mame_03510 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) Mame_03514 PF00224 Pyruvate kinase, barrel domain Mame_03514 PF02887 Pyruvate kinase, alpha/beta domain Mame_03515 PF02371 Transposase IS116/IS110/IS902 family Mame_03515 PF01548 Transposase Mame_03517 PF03315 Serine dehydratase beta chain Mame_03517 PF03313 Serine dehydratase alpha chain Mame_03521 PF00376 MerR family regulatory protein Mame_03521 PF09278 MerR, DNA binding Mame_03522 PF00571 CBS domain Mame_03522 PF03448 MgtE intracellular N domain Mame_03522 PF01769 Divalent cation transporter Mame_03523 PF00563 EAL domain Mame_03523 PF03707 Bacterial signalling protein N terminal repeat Mame_03523 PF00990 Diguanylate cyclase, GGDEF domain Mame_03525 PF00155 Aminotransferase class I and II Mame_03526 PF02798 Glutathione S-transferase, N-terminal domain Mame_03526 PF00043 Glutathione S-transferase, C-terminal domain Mame_03527 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus Mame_03527 PF01048 Phosphorylase superfamily Mame_03528 PF00781 Diacylglycerol kinase catalytic domain Mame_03537 PF01433 Peptidase family M1 domain Mame_03537 PF17432 Domain of unknown function (DUF3458_C) ARM repeats Mame_03537 PF11940 Domain of unknown function (DUF3458) Ig-like fold Mame_03539 PF08335 GlnD PII-uridylyltransferase Mame_03539 PF03710 Glutamate-ammonia ligase adenylyltransferase Mame_03540 PF00512 His Kinase A (phospho-acceptor) domain Mame_03540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03540 PF00672 HAMP domain Mame_03541 PF00486 Transcriptional regulatory protein, C terminal Mame_03541 PF00072 Response regulator receiver domain Mame_03542 PF13180 PDZ domain Mame_03543 PF03918 Cytochrome C biogenesis protein Mame_03544 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Mame_03544 PF01578 Cytochrome C assembly protein Mame_03545 PF03100 CcmE Mame_03548 PF00512 His Kinase A (phospho-acceptor) domain Mame_03548 PF08521 Two-component sensor kinase N-terminal Mame_03548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03549 PF00072 Response regulator receiver domain Mame_03549 PF00486 Transcriptional regulatory protein, C terminal Mame_03564 PF04860 Phage portal protein Mame_03568 PF03692 Putative zinc- or iron-chelating domain Mame_03570 PF02653 Branched-chain amino acid transport system / permease component Mame_03572 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_03572 PF00005 ABC transporter Mame_03573 PF00005 ABC transporter Mame_03579 PF02657 Fe-S metabolism associated domain Mame_03581 PF00308 Bacterial dnaA protein Mame_03581 PF08299 Bacterial dnaA protein helix-turn-helix Mame_03581 PF11638 DnaA N-terminal domain Mame_03582 PF05443 ROS/MUCR transcriptional regulator protein Mame_03583 PF03334 Na+/H+ antiporter subunit Mame_03584 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) Mame_03585 PF01899 Na+/H+ ion antiporter subunit Mame_03587 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L Mame_03588 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter Mame_03589 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Mame_03589 PF13244 Domain of unknown function (DUF4040) Mame_03589 PF00361 Proton-conducting membrane transporter Mame_03590 PF01641 SelR domain Mame_03592 PF00072 Response regulator receiver domain Mame_03595 PF11799 impB/mucB/samB family C-terminal domain Mame_03595 PF00817 impB/mucB/samB family Mame_03597 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_03597 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_03597 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_03598 PF01266 FAD dependent oxidoreductase Mame_03600 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_03602 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_03603 PF00155 Aminotransferase class I and II Mame_03603 PF00392 Bacterial regulatory proteins, gntR family Mame_03605 PF13454 FAD-NAD(P)-binding Mame_03607 PF01029 NusB family Mame_03608 PF03477 ATP cone domain Mame_03609 PF00464 Serine hydroxymethyltransferase Mame_03610 PF03734 L,D-transpeptidase catalytic domain Mame_03612 PF00490 Delta-aminolevulinic acid dehydratase Mame_03614 PF04376 Arginine-tRNA-protein transferase, N terminus Mame_03614 PF04377 Arginine-tRNA-protein transferase, C terminus Mame_03615 PF01741 Large-conductance mechanosensitive channel, MscL Mame_03621 PF00521 DNA gyrase/topoisomerase IV, subunit A Mame_03621 PF03989 DNA gyrase C-terminal domain, beta-propeller Mame_03623 PF12833 Helix-turn-helix domain Mame_03624 PF02056 Family 4 glycosyl hydrolase Mame_03624 PF11975 Family 4 glycosyl hydrolase C-terminal domain Mame_03625 PF08220 DeoR-like helix-turn-helix domain Mame_03625 PF00455 DeoR C terminal sensor domain Mame_03626 PF01869 BadF/BadG/BcrA/BcrD ATPase family Mame_03628 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03629 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03630 PF01380 SIS domain Mame_03631 PF08013 Tagatose 6 phosphate kinase Mame_03632 PF00005 ABC transporter Mame_03632 PF17912 MalK OB fold domain Mame_03632 PF03459 TOBE domain Mame_03633 PF00005 ABC transporter Mame_03634 PF02653 Branched-chain amino acid transport system / permease component Mame_03636 PF00152 tRNA synthetases class II (D, K and N) Mame_03636 PF02938 GAD domain Mame_03636 PF01336 OB-fold nucleic acid binding domain Mame_03637 PF00570 HRDC domain Mame_03637 PF01612 3'-5' exonuclease Mame_03640 PF12833 Helix-turn-helix domain Mame_03641 PF13090 Polyphosphate kinase C-terminal domain 2 Mame_03641 PF13089 Polyphosphate kinase N-terminal domain Mame_03641 PF17941 Polyphosphate kinase C-terminal domain 1 Mame_03641 PF02503 Polyphosphate kinase middle domain Mame_03647 PF01709 Transcriptional regulator Mame_03649 PF00296 Luciferase-like monooxygenase Mame_03650 PF03466 LysR substrate binding domain Mame_03650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03651 PF00248 Aldo/keto reductase family Mame_03652 PF02075 Crossover junction endodeoxyribonuclease RuvC Mame_03653 PF01330 RuvA N terminal domain Mame_03653 PF07499 RuvA, C-terminal domain Mame_03654 PF15937 prlF antitoxin for toxin YhaV_toxin Mame_03656 PF17864 RuvB AAA lid domain Mame_03656 PF05496 Holliday junction DNA helicase RuvB P-loop domain Mame_03656 PF05491 RuvB C-terminal winged helix domain Mame_03658 PF01594 AI-2E family transporter Mame_03659 PF02769 AIR synthase related protein, C-terminal domain Mame_03659 PF00586 AIR synthase related protein, N-terminal domain Mame_03660 PF00551 Formyl transferase Mame_03662 PF00753 Metallo-beta-lactamase superfamily Mame_03663 PF12802 MarR family Mame_03664 PF00072 Response regulator receiver domain Mame_03664 PF00486 Transcriptional regulatory protein, C terminal Mame_03665 PF00512 His Kinase A (phospho-acceptor) domain Mame_03665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03665 PF00672 HAMP domain Mame_03665 PF16527 Two-component sensor protein CpxA, periplasmic domain Mame_03666 PF00196 Bacterial regulatory proteins, luxR family Mame_03666 PF00072 Response regulator receiver domain Mame_03667 PF07730 Histidine kinase Mame_03669 PF13378 Enolase C-terminal domain-like Mame_03669 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_03670 PF00732 GMC oxidoreductase Mame_03670 PF05199 GMC oxidoreductase Mame_03671 PF01263 Aldose 1-epimerase Mame_03672 PF02653 Branched-chain amino acid transport system / permease component Mame_03673 PF00005 ABC transporter Mame_03674 PF13407 Periplasmic binding protein domain Mame_03675 PF07729 FCD domain Mame_03675 PF00392 Bacterial regulatory proteins, gntR family Mame_03676 PF05035 2-keto-3-deoxy-galactonokinase Mame_03677 PF01081 KDPG and KHG aldolase Mame_03678 PF00710 Asparaginase, N-terminal Mame_03678 PF17763 Glutaminase/Asparaginase C-terminal domain Mame_03680 PF16363 GDP-mannose 4,6 dehydratase Mame_03681 PF01370 NAD dependent epimerase/dehydratase family Mame_03682 PF03466 LysR substrate binding domain Mame_03682 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03685 PF01872 RibD C-terminal domain Mame_03690 PF12951 Passenger-associated-transport-repeat Mame_03690 PF00082 Subtilase family Mame_03690 PF03797 Autotransporter beta-domain Mame_03693 PF07690 Major Facilitator Superfamily Mame_03698 PF01638 HxlR-like helix-turn-helix Mame_03704 PF00732 GMC oxidoreductase Mame_03704 PF05199 GMC oxidoreductase Mame_03705 PF00005 ABC transporter Mame_03705 PF17912 MalK OB fold domain Mame_03706 PF00528 Binding-protein-dependent transport system inner membrane component Mame_03708 PF01547 Bacterial extracellular solute-binding protein Mame_03710 PF00356 Bacterial regulatory proteins, lacI family Mame_03713 PF00005 ABC transporter Mame_03714 PF01032 FecCD transport family Mame_03715 PF01032 FecCD transport family Mame_03716 PF01497 Periplasmic binding protein Mame_03717 PF07715 TonB-dependent Receptor Plug Domain Mame_03717 PF00593 TonB dependent receptor Mame_03718 PF12833 Helix-turn-helix domain Mame_03719 PF13577 SnoaL-like domain Mame_03720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_03720 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_03720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_03721 PF00378 Enoyl-CoA hydratase/isomerase Mame_03722 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_03722 PF00378 Enoyl-CoA hydratase/isomerase Mame_03722 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_03723 PF02515 CoA-transferase family III Mame_03725 PF01970 Tripartite tricarboxylate transporter TctA family Mame_03726 PF07331 Tripartite tricarboxylate transporter TctB family Mame_03730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_03730 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_03730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_03731 PF00583 Acetyltransferase (GNAT) family Mame_03731 PF13380 CoA binding domain Mame_03731 PF13607 Succinyl-CoA ligase like flavodoxin domain Mame_03732 PF00378 Enoyl-CoA hydratase/isomerase Mame_03733 PF03401 Tripartite tricarboxylate transporter family receptor Mame_03734 PF00440 Bacterial regulatory proteins, tetR family Mame_03734 PF18665 Tetracyclin repressor-like, C-terminal domain Mame_03735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03735 PF03466 LysR substrate binding domain Mame_03736 PF00296 Luciferase-like monooxygenase Mame_03737 PF01613 Flavin reductase like domain Mame_03739 PF00753 Metallo-beta-lactamase superfamily Mame_03739 PF00258 Flavodoxin Mame_03740 PF00391 PEP-utilising enzyme, mobile domain Mame_03740 PF02896 PEP-utilising enzyme, TIM barrel domain Mame_03740 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain Mame_03741 PF02463 RecF/RecN/SMC N terminal domain Mame_03744 PF14815 NUDIX domain Mame_03744 PF00633 Helix-hairpin-helix motif Mame_03744 PF00730 HhH-GPD superfamily base excision DNA repair protein Mame_03746 PF18755 Restriction Enzyme Adenine Methylase Associated Mame_03746 PF01555 DNA methylase Mame_03750 PF13277 YmdB-like protein Mame_03755 PF02779 Transketolase, pyrimidine binding domain Mame_03755 PF00456 Transketolase, thiamine diphosphate binding domain Mame_03755 PF02780 Transketolase, C-terminal domain Mame_03756 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain Mame_03756 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Mame_03761 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_03761 PF14602 Hexapeptide repeat of succinyl-transferase Mame_03761 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal Mame_03762 PF07687 Peptidase dimerisation domain Mame_03762 PF01546 Peptidase family M20/M25/M40 Mame_03765 PF03358 NADPH-dependent FMN reductase Mame_03766 PF03960 ArsC family Mame_03767 PF01416 tRNA pseudouridine synthase Mame_03768 PF00551 Formyl transferase Mame_03768 PF02911 Formyl transferase, C-terminal domain Mame_03769 PF01327 Polypeptide deformylase Mame_03771 PF00294 pfkB family carbohydrate kinase Mame_03772 PF02653 Branched-chain amino acid transport system / permease component Mame_03773 PF00005 ABC transporter Mame_03774 PF13407 Periplasmic binding protein domain Mame_03775 PF13407 Periplasmic binding protein domain Mame_03778 PF14765 Polyketide synthase dehydratase Mame_03778 PF00550 Phosphopantetheine attachment site Mame_03778 PF08659 KR domain Mame_03778 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_03778 PF16197 Ketoacyl-synthetase C-terminal extension Mame_03778 PF09277 Erythronolide synthase, docking Mame_03778 PF08990 Erythronolide synthase docking Mame_03778 PF08240 Alcohol dehydrogenase GroES-like domain Mame_03778 PF00698 Acyl transferase domain Mame_03778 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_03781 PF00501 AMP-binding enzyme Mame_03781 PF13193 AMP-binding enzyme C-terminal domain Mame_03782 PF00749 tRNA synthetases class I (E and Q), catalytic domain Mame_03783 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_03787 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_03789 PF00043 Glutathione S-transferase, C-terminal domain Mame_03789 PF02798 Glutathione S-transferase, N-terminal domain Mame_03790 PF00512 His Kinase A (phospho-acceptor) domain Mame_03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_03790 PF00672 HAMP domain Mame_03792 PF00072 Response regulator receiver domain Mame_03792 PF00486 Transcriptional regulatory protein, C terminal Mame_03793 PF06224 Winged helix DNA-binding domain Mame_03794 PF00005 ABC transporter Mame_03795 PF02361 Cobalt transport protein Mame_03796 PF02632 BioY family Mame_03798 PF02609 Exonuclease VII small subunit Mame_03799 PF05726 Pirin C-terminal cupin domain Mame_03799 PF02678 Pirin Mame_03800 PF13292 1-deoxy-D-xylulose-5-phosphate synthase Mame_03800 PF02780 Transketolase, C-terminal domain Mame_03800 PF02779 Transketolase, pyrimidine binding domain Mame_03801 PF01728 FtsJ-like methyltransferase Mame_03801 PF01479 S4 domain Mame_03802 PF05958 tRNA (Uracil-5-)-methyltransferase Mame_03803 PF07886 BA14K-like protein Mame_03804 PF00106 short chain dehydrogenase Mame_03806 PF01638 HxlR-like helix-turn-helix Mame_03807 PF00574 Clp protease Mame_03808 PF00248 Aldo/keto reductase family Mame_03809 PF16916 Dimerisation domain of Zinc Transporter Mame_03809 PF01545 Cation efflux family Mame_03810 PF00425 chorismate binding enzyme Mame_03810 PF00117 Glutamine amidotransferase class-I Mame_03810 PF04715 Anthranilate synthase component I, N terminal region Mame_03811 PF01043 SecA preprotein cross-linking domain Mame_03811 PF07517 SecA DEAD-like domain Mame_03811 PF02810 SEC-C motif Mame_03811 PF07516 SecA Wing and Scaffold domain Mame_03812 PF00639 PPIC-type PPIASE domain Mame_03813 PF01960 ArgJ family Mame_03814 PF00583 Acetyltransferase (GNAT) family Mame_03815 PF00293 NUDIX domain Mame_03816 PF08241 Methyltransferase domain Mame_03818 PF00462 Glutaredoxin Mame_03819 PF00795 Carbon-nitrogen hydrolase Mame_03822 PF02530 Porin subfamily Mame_03823 PF02566 OsmC-like protein Mame_03824 PF01047 MarR family Mame_03826 PF08240 Alcohol dehydrogenase GroES-like domain Mame_03826 PF00107 Zinc-binding dehydrogenase Mame_03828 PF00654 Voltage gated chloride channel Mame_03829 PF01507 Phosphoadenosine phosphosulfate reductase family Mame_03830 PF00356 Bacterial regulatory proteins, lacI family Mame_03831 PF14759 Reductase C-terminal Mame_03831 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_03832 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_03833 PF13382 Adenine deaminase C-terminal domain Mame_03833 PF01979 Amidohydrolase family Mame_03834 PF00440 Bacterial regulatory proteins, tetR family Mame_03834 PF17754 MftR C-terminal domain Mame_03836 PF00005 ABC transporter Mame_03839 PF14403 Circularly permuted ATP-grasp type 2 Mame_03839 PF04168 A predicted alpha-helical domain with a conserved ER motif. Mame_03840 PF08379 Bacterial transglutaminase-like N-terminal region Mame_03840 PF01841 Transglutaminase-like superfamily Mame_03841 PF00343 Carbohydrate phosphorylase Mame_03842 PF00128 Alpha amylase, catalytic domain Mame_03842 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Mame_03842 PF02806 Alpha amylase, C-terminal all-beta domain Mame_03843 PF00483 Nucleotidyl transferase Mame_03844 PF00534 Glycosyl transferases group 1 Mame_03844 PF08323 Starch synthase catalytic domain Mame_03845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Mame_03845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III Mame_03845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I Mame_03845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain Mame_03846 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Mame_03846 PF18390 Glycogen debranching enzyme C-terminal domain Mame_03846 PF00128 Alpha amylase, catalytic domain Mame_03847 PF01575 MaoC like domain Mame_03850 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_03850 PF01571 Aminomethyltransferase folate-binding domain Mame_03850 PF17806 Sarcosine oxidase A3 domain Mame_03850 PF08669 Glycine cleavage T-protein C-terminal barrel domain Mame_03851 PF04267 Sarcosine oxidase, delta subunit family Mame_03852 PF12697 Alpha/beta hydrolase family Mame_03853 PF01266 FAD dependent oxidoreductase Mame_03859 PF05171 Haemin-degrading HemS.ChuX domain Mame_03860 PF01497 Periplasmic binding protein Mame_03861 PF01032 FecCD transport family Mame_03862 PF00005 ABC transporter Mame_03864 PF00849 RNA pseudouridylate synthase Mame_03864 PF01479 S4 domain Mame_03865 PF14437 MafB19-like deaminase Mame_03866 PF00583 Acetyltransferase (GNAT) family Mame_03868 PF08264 Anticodon-binding domain of tRNA Mame_03868 PF00133 tRNA synthetases class I (I, L, M and V) Mame_03869 PF01687 Riboflavin kinase Mame_03869 PF06574 FAD synthetase Mame_03871 PF02417 Chromate transporter Mame_03872 PF00166 Chaperonin 10 Kd subunit Mame_03873 PF00118 TCP-1/cpn60 chaperonin family Mame_03877 PF05974 Domain of unknown function (DUF892) Mame_03878 PF00043 Glutathione S-transferase, C-terminal domain Mame_03878 PF02798 Glutathione S-transferase, N-terminal domain Mame_03879 PF01144 Coenzyme A transferase Mame_03880 PF01144 Coenzyme A transferase Mame_03881 PF00108 Thiolase, N-terminal domain Mame_03881 PF02803 Thiolase, C-terminal domain Mame_03882 PF09339 IclR helix-turn-helix domain Mame_03882 PF01614 Bacterial transcriptional regulator Mame_03883 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03883 PF03466 LysR substrate binding domain Mame_03885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_03885 PF18029 Glyoxalase-like domain Mame_03886 PF04107 Glutamate-cysteine ligase family 2(GCS2) Mame_03887 PF04452 RNA methyltransferase Mame_03890 PF03466 LysR substrate binding domain Mame_03890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_03891 PF01565 FAD binding domain Mame_03891 PF02913 FAD linked oxidases, C-terminal domain Mame_03892 PF01565 FAD binding domain Mame_03894 PF13183 4Fe-4S dicluster domain Mame_03894 PF02754 Cysteine-rich domain Mame_03895 PF01156 Inosine-uridine preferring nucleoside hydrolase Mame_03896 PF00011 Hsp20/alpha crystallin family Mame_03898 PF02390 Putative methyltransferase Mame_03899 PF02773 S-adenosylmethionine synthetase, C-terminal domain Mame_03899 PF02772 S-adenosylmethionine synthetase, central domain Mame_03899 PF00438 S-adenosylmethionine synthetase, N-terminal domain Mame_03900 PF01381 Helix-turn-helix Mame_03901 PF00795 Carbon-nitrogen hydrolase Mame_03902 PF03471 Transporter associated domain Mame_03902 PF00571 CBS domain Mame_03903 PF02130 Uncharacterized protein family UPF0054 Mame_03904 PF02562 PhoH-like protein Mame_03905 PF01938 TRAM domain Mame_03905 PF00919 Uncharacterized protein family UPF0004 Mame_03905 PF04055 Radical SAM superfamily Mame_03906 PF01553 Acyltransferase Mame_03907 PF01475 Ferric uptake regulator family Mame_03909 PF00814 Glycoprotease family Mame_03910 PF01106 NifU-like domain Mame_03912 PF00579 tRNA synthetases class I (W and Y) Mame_03913 PF03023 Lipid II flippase MurJ Mame_03914 PF01842 ACT domain Mame_03914 PF01909 Nucleotidyltransferase domain Mame_03914 PF08335 GlnD PII-uridylyltransferase Mame_03914 PF01966 HD domain Mame_03915 PF05188 MutS domain II Mame_03915 PF05192 MutS domain III Mame_03915 PF00488 MutS domain V Mame_03915 PF01624 MutS domain I Mame_03915 PF05190 MutS family domain IV Mame_03917 PF01252 Signal peptidase (SPase) II Mame_03918 PF00588 SpoU rRNA Methylase family Mame_03918 PF08032 RNA 2'-O ribose methyltransferase substrate binding Mame_03919 PF02926 THUMP domain Mame_03919 PF01170 Putative RNA methylase family UPF0020 Mame_03919 PF10672 S-adenosylmethionine-dependent methyltransferase Mame_03921 PF00216 Bacterial DNA-binding protein Mame_03923 PF03968 OstA-like protein Mame_03924 PF00005 ABC transporter Mame_03925 PF00309 Sigma-54 factor, Activator interacting domain (AID) Mame_03925 PF04552 Sigma-54, DNA binding domain Mame_03925 PF04963 Sigma-54 factor, core binding domain Mame_03926 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein Mame_03926 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus Mame_03927 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 Mame_03929 PF01025 GrpE Mame_03930 PF01628 HrcA protein C terminal domain Mame_03931 PF01138 3' exoribonuclease family, domain 1 Mame_03931 PF03725 3' exoribonuclease family, domain 2 Mame_03933 PF01725 Ham1 family Mame_03934 PF06969 HemN C-terminal domain Mame_03934 PF04055 Radical SAM superfamily Mame_03938 PF03358 NADPH-dependent FMN reductase Mame_03939 PF00994 Probable molybdopterin binding domain Mame_03939 PF18146 Damage-inducible protein CinA KH domain Mame_03939 PF02464 Competence-damaged protein Mame_03941 PF00156 Phosphoribosyl transferase domain Mame_03943 PF16193 AAA C-terminal domain Mame_03943 PF12002 MgsA AAA+ ATPase C terminal Mame_03943 PF00004 ATPase family associated with various cellular activities (AAA) Mame_03944 PF00595 PDZ domain Mame_03946 PF00905 Penicillin binding protein transpeptidase domain Mame_03947 PF00920 Dehydratase family Mame_03951 PF00174 Oxidoreductase molybdopterin binding domain Mame_03952 PF01794 Ferric reductase like transmembrane component Mame_03953 PF05675 Protein of unknown function (DUF817) Mame_03955 PF01196 Ribosomal protein L17 Mame_03956 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain Mame_03956 PF01000 RNA polymerase Rpb3/RpoA insert domain Mame_03956 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain Mame_03957 PF00411 Ribosomal protein S11 Mame_03958 PF00416 Ribosomal protein S13/S18 Mame_03960 PF00344 SecY translocase Mame_03961 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Mame_03962 PF00327 Ribosomal protein L30p/L7e Mame_03963 PF03719 Ribosomal protein S5, C-terminal domain Mame_03963 PF00333 Ribosomal protein S5, N-terminal domain Mame_03964 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Mame_03965 PF00347 Ribosomal protein L6 Mame_03966 PF00410 Ribosomal protein S8 Mame_03967 PF00253 Ribosomal protein S14p/S29e Mame_03968 PF00281 Ribosomal protein L5 Mame_03968 PF00673 ribosomal L5P family C-terminus Mame_03969 PF00467 KOW motif Mame_03969 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 Mame_03970 PF00238 Ribosomal protein L14p/L23e Mame_03971 PF00366 Ribosomal protein S17 Mame_03972 PF00831 Ribosomal L29 protein Mame_03973 PF00252 Ribosomal protein L16p/L10e Mame_03974 PF07650 KH domain Mame_03974 PF00189 Ribosomal protein S3, C-terminal domain Mame_03975 PF00237 Ribosomal protein L22p/L17e Mame_03976 PF00203 Ribosomal protein S19 Mame_03977 PF00181 Ribosomal Proteins L2, RNA binding domain Mame_03977 PF03947 Ribosomal Proteins L2, C-terminal domain Mame_03978 PF00276 Ribosomal protein L23 Mame_03979 PF00573 Ribosomal protein L4/L1 family Mame_03980 PF00297 Ribosomal protein L3 Mame_03981 PF00338 Ribosomal protein S10p/S20e Mame_03982 PF03144 Elongation factor Tu domain 2 Mame_03982 PF03143 Elongation factor Tu C-terminal domain Mame_03982 PF00009 Elongation factor Tu GTP binding domain Mame_03983 PF00679 Elongation factor G C-terminus Mame_03983 PF03144 Elongation factor Tu domain 2 Mame_03983 PF00009 Elongation factor Tu GTP binding domain Mame_03983 PF03764 Elongation factor G, domain IV Mame_03983 PF14492 Elongation Factor G, domain II Mame_03984 PF00177 Ribosomal protein S7p/S5e Mame_03985 PF00164 Ribosomal protein S12/S23 Mame_03989 PF00563 EAL domain Mame_03989 PF12792 CSS motif domain associated with EAL Mame_03991 PF01810 LysE type translocator Mame_03992 PF05000 RNA polymerase Rpb1, domain 4 Mame_03992 PF04983 RNA polymerase Rpb1, domain 3 Mame_03992 PF00623 RNA polymerase Rpb1, domain 2 Mame_03992 PF04998 RNA polymerase Rpb1, domain 5 Mame_03992 PF04997 RNA polymerase Rpb1, domain 1 Mame_03993 PF04560 RNA polymerase Rpb2, domain 7 Mame_03993 PF04563 RNA polymerase beta subunit Mame_03993 PF04561 RNA polymerase Rpb2, domain 2 Mame_03993 PF10385 RNA polymerase beta subunit external 1 domain Mame_03993 PF00562 RNA polymerase Rpb2, domain 6 Mame_03993 PF04565 RNA polymerase Rpb2, domain 3 Mame_03994 PF00542 Ribosomal protein L7/L12 C-terminal domain Mame_03994 PF16320 Ribosomal protein L7/L12 dimerisation domain Mame_03995 PF00466 Ribosomal protein L10 Mame_03996 PF00687 Ribosomal protein L1p/L10e family Mame_03997 PF00298 Ribosomal protein L11, RNA binding domain Mame_03997 PF03946 Ribosomal protein L11, N-terminal domain Mame_03998 PF00467 KOW motif Mame_03998 PF02357 Transcription termination factor nusG Mame_04001 PF01266 FAD dependent oxidoreductase Mame_04001 PF01571 Aminomethyltransferase folate-binding domain Mame_04001 PF08669 Glycine cleavage T-protein C-terminal barrel domain Mame_04001 PF16350 FAD dependent oxidoreductase central domain Mame_04002 PF00924 Mechanosensitive ion channel Mame_04002 PF12795 Mechanosensitive ion channel porin domain Mame_04002 PF12794 Mechanosensitive ion channel inner membrane domain 1 Mame_04004 PF01594 AI-2E family transporter Mame_04006 PF04055 Radical SAM superfamily Mame_04006 PF06463 Molybdenum Cofactor Synthesis C Mame_04008 PF12804 MobA-like NTP transferase domain Mame_04010 PF01809 Putative membrane protein insertion efficiency factor Mame_04012 PF01502 Phosphoribosyl-AMP cyclohydrolase Mame_04013 PF01609 Transposase DDE domain Mame_04013 PF13808 DDE_Tnp_1-associated Mame_04016 PF07943 Penicillin-binding protein 5, C-terminal domain Mame_04016 PF00768 D-alanyl-D-alanine carboxypeptidase Mame_04018 PF00691 OmpA family Mame_04018 PF13488 Glycine zipper Mame_04019 PF13488 Glycine zipper Mame_04019 PF00691 OmpA family Mame_04020 PF00873 AcrB/AcrD/AcrF family Mame_04021 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_04022 PF13361 UvrD-like helicase C-terminal domain Mame_04022 PF00580 UvrD/REP helicase N-terminal domain Mame_04023 PF01588 Putative tRNA binding domain Mame_04024 PF03807 NADP oxidoreductase coenzyme F420-dependent Mame_04024 PF14748 Pyrroline-5-carboxylate reductase dimerisation Mame_04028 PF01790 Prolipoprotein diacylglyceryl transferase Mame_04033 PF14572 Phosphoribosyl synthetase-associated domain Mame_04033 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Mame_04034 PF03707 Bacterial signalling protein N terminal repeat Mame_04034 PF00990 Diguanylate cyclase, GGDEF domain Mame_04034 PF00563 EAL domain Mame_04035 PF00857 Isochorismatase family Mame_04038 PF00557 Metallopeptidase family M24 Mame_04038 PF01321 Creatinase/Prolidase N-terminal domain Mame_04040 PF18158 Adaptive response protein AidB N-terminal domain Mame_04040 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_04040 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_04041 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Mame_04041 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Mame_04042 PF01979 Amidohydrolase family Mame_04043 PF02660 Glycerol-3-phosphate acyltransferase Mame_04044 PF17782 DprA winged helix domain Mame_04044 PF02481 DNA recombination-mediator protein A Mame_04046 PF13368 Topoisomerase C-terminal repeat Mame_04046 PF01396 Topoisomerase DNA binding C4 zinc finger Mame_04046 PF01131 DNA topoisomerase Mame_04046 PF01751 Toprim domain Mame_04047 PF00773 RNB domain Mame_04047 PF17876 Cold shock domain Mame_04047 PF00575 S1 RNA binding domain Mame_04047 PF08206 Ribonuclease B OB domain Mame_04047 PF08461 Ribonuclease R winged-helix domain Mame_04048 PF01386 Ribosomal L25p family Mame_04048 PF14693 Ribosomal protein TL5, C-terminal domain Mame_04049 PF03707 Bacterial signalling protein N terminal repeat Mame_04049 PF00563 EAL domain Mame_04049 PF00990 Diguanylate cyclase, GGDEF domain Mame_04049 PF13188 PAS domain Mame_04050 PF01195 Peptidyl-tRNA hydrolase Mame_04051 PF02617 ATP-dependent Clp protease adaptor protein ClpS Mame_04052 PF01926 50S ribosome-binding GTPase Mame_04052 PF06071 Protein of unknown function (DUF933) Mame_04053 PF00255 Glutathione peroxidase Mame_04054 PF00156 Phosphoribosyl transferase domain Mame_04055 PF00032 Cytochrome b(C-terminal)/b6/petD Mame_04055 PF02167 Cytochrome C1 family Mame_04055 PF00033 Cytochrome b/b6/petB Mame_04056 PF00032 Cytochrome b(C-terminal)/b6/petD Mame_04056 PF00033 Cytochrome b/b6/petB Mame_04057 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal Mame_04057 PF00355 Rieske [2Fe-2S] domain Mame_04058 PF00005 ABC transporter Mame_04058 PF00664 ABC transporter transmembrane region Mame_04059 PF00005 ABC transporter Mame_04059 PF00664 ABC transporter transmembrane region Mame_04063 PF00588 SpoU rRNA Methylase family Mame_04065 PF01218 Coproporphyrinogen III oxidase Mame_04068 PF12627 Probable RNA and SrmB- binding site of polymerase A Mame_04068 PF13735 tRNA nucleotidyltransferase domain 2 putative Mame_04068 PF01743 Poly A polymerase head domain Mame_04069 PF00293 NUDIX domain Mame_04071 PF07726 ATPase family associated with various cellular activities (AAA) Mame_04071 PF17863 AAA lid domain Mame_04076 PF13409 Glutathione S-transferase, N-terminal domain Mame_04080 PF08502 LeuA allosteric (dimerisation) domain Mame_04080 PF00682 HMGL-like Mame_04082 PF03594 Benzoate membrane transport protein Mame_04083 PF11987 Translation-initiation factor 2 Mame_04083 PF04760 Translation initiation factor IF-2, N-terminal region Mame_04083 PF00009 Elongation factor Tu GTP binding domain Mame_04083 PF08364 Bacterial translation initiation factor IF-2 associated region Mame_04085 PF13184 NusA-like KH domain Mame_04085 PF00575 S1 RNA binding domain Mame_04085 PF08529 NusA N-terminal domain Mame_04086 PF02576 RimP N-terminal domain Mame_04086 PF17384 RimP C-terminal SH3 domain Mame_04087 PF05977 Transmembrane secretion effector Mame_04088 PF13406 Transglycosylase SLT domain Mame_04090 PF02673 Bacitracin resistance protein BacA Mame_04091 PF00043 Glutathione S-transferase, C-terminal domain Mame_04091 PF13417 Glutathione S-transferase, N-terminal domain Mame_04092 PF08331 Domain of unknown function (DUF1730) Mame_04097 PF02789 Cytosol aminopeptidase family, N-terminal domain Mame_04097 PF00883 Cytosol aminopeptidase family, catalytic domain Mame_04098 PF00877 NlpC/P60 family Mame_04099 PF01548 Transposase Mame_04099 PF02371 Transposase IS116/IS110/IS902 family Mame_04100 PF00403 Heavy-metal-associated domain Mame_04102 PF01810 LysE type translocator Mame_04104 PF04204 Homoserine O-succinyltransferase Mame_04105 PF01263 Aldose 1-epimerase Mame_04108 PF07977 FabA-like domain Mame_04109 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_04109 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_04112 PF02530 Porin subfamily Mame_04115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain Mame_04115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain Mame_04117 PF07690 Major Facilitator Superfamily Mame_04118 PF12833 Helix-turn-helix domain Mame_04118 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term Mame_04119 PF00106 short chain dehydrogenase Mame_04122 PF07733 Bacterial DNA polymerase III alpha NTPase domain Mame_04122 PF02811 PHP domain Mame_04122 PF14579 Helix-hairpin-helix motif Mame_04122 PF01336 OB-fold nucleic acid binding domain Mame_04122 PF17657 Bacterial DNA polymerase III alpha subunit finger domain Mame_04125 PF00885 6,7-dimethyl-8-ribityllumazine synthase Mame_04126 PF00925 GTP cyclohydrolase II Mame_04126 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase Mame_04127 PF01872 RibD C-terminal domain Mame_04127 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region Mame_04129 PF07237 Protein of unknown function (DUF1428) Mame_04131 PF03786 D-mannonate dehydratase (UxuA) Mame_04132 PF07729 FCD domain Mame_04132 PF00392 Bacterial regulatory proteins, gntR family Mame_04133 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_04134 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Mame_04134 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04135 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04136 PF00990 Diguanylate cyclase, GGDEF domain Mame_04137 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_04138 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04140 PF13406 Transglycosylase SLT domain Mame_04141 PF02706 Chain length determinant protein Mame_04141 PF13614 AAA domain Mame_04141 PF13807 G-rich domain on putative tyrosine kinase Mame_04142 PF00953 Glycosyl transferase family 4 Mame_04143 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Mame_04143 PF03033 Glycosyltransferase family 28 N-terminal domain Mame_04144 PF00459 Inositol monophosphatase family Mame_04145 PF00009 Elongation factor Tu GTP binding domain Mame_04146 PF01507 Phosphoadenosine phosphosulfate reductase family Mame_04149 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04150 PF13545 Crp-like helix-turn-helix domain Mame_04150 PF00027 Cyclic nucleotide-binding domain Mame_04151 PF00290 Tryptophan synthase alpha chain Mame_04152 PF00291 Pyridoxal-phosphate dependent enzyme Mame_04153 PF02653 Branched-chain amino acid transport system / permease component Mame_04154 PF00005 ABC transporter Mame_04155 PF13407 Periplasmic binding protein domain Mame_04156 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_04156 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_04157 PF00290 Tryptophan synthase alpha chain Mame_04159 PF17885 Styrene monooxygenase A putative substrate binding domain Mame_04161 PF01613 Flavin reductase like domain Mame_04162 PF12833 Helix-turn-helix domain Mame_04162 PF14525 AraC-binding-like domain Mame_04163 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04163 PF03466 LysR substrate binding domain Mame_04164 PF00795 Carbon-nitrogen hydrolase Mame_04166 PF00005 ABC transporter Mame_04166 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04167 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04168 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04168 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_04172 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases Mame_04172 PF10414 Sirohaem synthase dimerisation region Mame_04172 PF14824 Sirohaem biosynthesis protein central Mame_04174 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain Mame_04174 PF01077 Nitrite and sulphite reductase 4Fe-4S domain Mame_04174 PF04324 BFD-like [2Fe-2S] binding domain Mame_04174 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04174 PF18267 Rubredoxin NAD+ reductase C-terminal domain Mame_04175 PF00005 ABC transporter Mame_04176 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04177 PF00005 ABC transporter Mame_04179 PF03861 ANTAR domain Mame_04179 PF08376 Nitrate and nitrite sensing Mame_04180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain Mame_04180 PF00384 Molybdopterin oxidoreductase Mame_04180 PF01568 Molydopterin dinucleotide binding domain Mame_04181 PF04343 Protein of unknown function, DUF488 Mame_04183 PF01152 Bacterial-like globin Mame_04184 PF00994 Probable molybdopterin binding domain Mame_04185 PF06463 Molybdenum Cofactor Synthesis C Mame_04185 PF04055 Radical SAM superfamily Mame_04187 PF09312 SurA N-terminal domain Mame_04188 PF02665 Nitrate reductase gamma subunit Mame_04189 PF02613 Nitrate reductase delta subunit Mame_04190 PF13247 4Fe-4S dicluster domain Mame_04190 PF14711 Respiratory nitrate reductase beta C-terminal Mame_04191 PF01568 Molydopterin dinucleotide binding domain Mame_04191 PF14710 Respiratory nitrate reductase alpha N-terminal Mame_04191 PF00384 Molybdopterin oxidoreductase Mame_04192 PF07690 Major Facilitator Superfamily Mame_04194 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04194 PF03466 LysR substrate binding domain Mame_04195 PF09084 NMT1/THI5 like Mame_04196 PF00005 ABC transporter Mame_04197 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04198 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_04198 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04199 PF02515 CoA-transferase family III Mame_04200 PF00378 Enoyl-CoA hydratase/isomerase Mame_04201 PF00037 4Fe-4S binding domain Mame_04202 PF00701 Dihydrodipicolinate synthetase family Mame_04204 PF00248 Aldo/keto reductase family Mame_04205 PF08125 Mannitol dehydrogenase C-terminal domain Mame_04205 PF01232 Mannitol dehydrogenase Rossmann domain Mame_04206 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Mame_04206 PF08666 SAF domain Mame_04207 PF00107 Zinc-binding dehydrogenase Mame_04207 PF08240 Alcohol dehydrogenase GroES-like domain Mame_04208 PF00005 ABC transporter Mame_04210 PF02653 Branched-chain amino acid transport system / permease component Mame_04211 PF07729 FCD domain Mame_04211 PF00392 Bacterial regulatory proteins, gntR family Mame_04212 PF00884 Sulfatase Mame_04212 PF16347 Domain of unknown function (DUF4976) Mame_04214 PF00330 Aconitase family (aconitate hydratase) Mame_04215 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04216 PF00497 Bacterial extracellular solute-binding proteins, family 3 Mame_04218 PF01245 Ribosomal protein L19 Mame_04219 PF00583 Acetyltransferase (GNAT) family Mame_04220 PF01746 tRNA (Guanine-1)-methyltransferase Mame_04221 PF05239 PRC-barrel domain Mame_04221 PF01782 RimM N-terminal domain Mame_04222 PF00886 Ribosomal protein S16 Mame_04223 PF02153 Prephenate dehydrogenase Mame_04223 PF01817 Chorismate mutase type II Mame_04224 PF02978 Signal peptide binding domain Mame_04224 PF02881 SRP54-type protein, helical bundle domain Mame_04224 PF00448 SRP54-type protein, GTPase domain Mame_04229 PF01678 Diaminopimelate epimerase Mame_04232 PF04055 Radical SAM superfamily Mame_04232 PF00919 Uncharacterized protein family UPF0004 Mame_04233 PF02881 SRP54-type protein, helical bundle domain Mame_04233 PF00448 SRP54-type protein, GTPase domain Mame_04234 PF04279 Intracellular septation protein A Mame_04235 PF08534 Redoxin Mame_04237 PF01578 Cytochrome C assembly protein Mame_04238 PF03379 CcmB protein Mame_04239 PF00005 ABC transporter Mame_04240 PF00330 Aconitase family (aconitate hydratase) Mame_04240 PF00694 Aconitase C-terminal domain Mame_04245 PF01925 Sulfite exporter TauE/SafE Mame_04249 PF00270 DEAD/DEAH box helicase Mame_04249 PF08494 DEAD/H associated Mame_04249 PF00271 Helicase conserved C-terminal domain Mame_04255 PF01180 Dihydroorotate dehydrogenase Mame_04257 PF00196 Bacterial regulatory proteins, luxR family Mame_04257 PF00072 Response regulator receiver domain Mame_04262 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04262 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_04262 PF00403 Heavy-metal-associated domain Mame_04265 PF09308 LuxQ, periplasmic Mame_04265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04265 PF00072 Response regulator receiver domain Mame_04265 PF00512 His Kinase A (phospho-acceptor) domain Mame_04267 PF01370 NAD dependent epimerase/dehydratase family Mame_04268 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain Mame_04268 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain Mame_04269 PF08544 GHMP kinases C terminal Mame_04269 PF10509 Galactokinase galactose-binding signature Mame_04269 PF00288 GHMP kinases N terminal domain Mame_04270 PF01297 Zinc-uptake complex component A periplasmic Mame_04271 PF00005 ABC transporter Mame_04272 PF00950 ABC 3 transport family Mame_04273 PF00950 ABC 3 transport family Mame_04274 PF01979 Amidohydrolase family Mame_04275 PF01757 Acyltransferase family Mame_04276 PF03746 LamB/YcsF family Mame_04277 PF07690 Major Facilitator Superfamily Mame_04279 PF01336 OB-fold nucleic acid binding domain Mame_04279 PF00152 tRNA synthetases class II (D, K and N) Mame_04280 PF00749 tRNA synthetases class I (E and Q), catalytic domain Mame_04281 PF03741 Integral membrane protein TerC family Mame_04281 PF03471 Transporter associated domain Mame_04282 PF13533 Biotin-lipoyl like Mame_04283 PF07690 Major Facilitator Superfamily Mame_04284 PF08361 MAATS-type transcriptional repressor, C-terminal region Mame_04284 PF00440 Bacterial regulatory proteins, tetR family Mame_04285 PF01430 Hsp33 protein Mame_04286 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain Mame_04286 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Mame_04287 PF00202 Aminotransferase class-III Mame_04290 PF02634 FdhD/NarQ family Mame_04291 PF00392 Bacterial regulatory proteins, gntR family Mame_04292 PF04055 Radical SAM superfamily Mame_04292 PF12544 Lysine-2,3-aminomutase Mame_04293 PF00083 Sugar (and other) transporter Mame_04295 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04296 PF09084 NMT1/THI5 like Mame_04299 PF00444 Ribosomal protein L36 Mame_04300 PF02222 ATP-grasp domain Mame_04300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain Mame_04301 PF00731 AIR carboxylase Mame_04304 PF09722 Protein of unknown function (DUF2384) Mame_04306 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04306 PF03466 LysR substrate binding domain Mame_04307 PF00291 Pyridoxal-phosphate dependent enzyme Mame_04308 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family Mame_04309 PF01177 Asp/Glu/Hydantoin racemase Mame_04310 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Mame_04311 PF00005 ABC transporter Mame_04312 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04314 PF00561 alpha/beta hydrolase fold Mame_04317 PF00529 HlyD membrane-fusion protein of T1SS Mame_04318 PF00005 ABC transporter Mame_04318 PF00664 ABC transporter transmembrane region Mame_04320 PF13181 Tetratricopeptide repeat Mame_04320 PF01435 Peptidase family M48 Mame_04324 PF00378 Enoyl-CoA hydratase/isomerase Mame_04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04325 PF00672 HAMP domain Mame_04325 PF00512 His Kinase A (phospho-acceptor) domain Mame_04326 PF00072 Response regulator receiver domain Mame_04326 PF00486 Transcriptional regulatory protein, C terminal Mame_04329 PF00440 Bacterial regulatory proteins, tetR family Mame_04331 PF08240 Alcohol dehydrogenase GroES-like domain Mame_04331 PF00107 Zinc-binding dehydrogenase Mame_04333 PF12833 Helix-turn-helix domain Mame_04333 PF12852 Cupin Mame_04336 PF00958 GMP synthase C terminal domain Mame_04336 PF00117 Glutamine amidotransferase class-I Mame_04337 PF01048 Phosphorylase superfamily Mame_04338 PF03061 Thioesterase superfamily Mame_04339 PF03073 TspO/MBR family Mame_04344 PF01189 16S rRNA methyltransferase RsmB/F Mame_04344 PF01029 NusB family Mame_04345 PF03109 ABC1 family Mame_04346 PF01209 ubiE/COQ5 methyltransferase family Mame_04347 PF06827 Zinc finger found in FPG and IleRS Mame_04347 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain Mame_04347 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain Mame_04348 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_04348 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_04348 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_04349 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_04349 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_04350 PF01649 Ribosomal protein S20 Mame_04351 PF13614 AAA domain Mame_04351 PF00376 MerR family regulatory protein Mame_04352 PF02195 ParB-like nuclease domain Mame_04352 PF07506 RepB plasmid partitioning protein Mame_04353 PF11800 Replication protein C C-terminal region Mame_04353 PF03428 Replication protein C N-terminal domain Mame_04355 PF01850 PIN domain Mame_04356 PF00589 Phage integrase family Mame_04358 PF04079 Segregation and condensation complex subunit ScpB Mame_04359 PF01037 Lrp/AsnC ligand binding domain Mame_04360 PF01177 Asp/Glu/Hydantoin racemase Mame_04362 PF02653 Branched-chain amino acid transport system / permease component Mame_04363 PF02653 Branched-chain amino acid transport system / permease component Mame_04363 PF11862 Domain of unknown function (DUF3382) Mame_04364 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_04364 PF00005 ABC transporter Mame_04365 PF00005 ABC transporter Mame_04367 PF13454 FAD-NAD(P)-binding Mame_04368 PF03060 Nitronate monooxygenase Mame_04368 PF00698 Acyl transferase domain Mame_04369 PF01648 4'-phosphopantetheinyl transferase superfamily Mame_04370 PF00550 Phosphopantetheine attachment site Mame_04370 PF00501 AMP-binding enzyme Mame_04370 PF13193 AMP-binding enzyme C-terminal domain Mame_04370 PF00668 Condensation domain Mame_04373 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_04375 PF00248 Aldo/keto reductase family Mame_04376 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus Mame_04376 PF08666 SAF domain Mame_04377 PF05336 L-rhamnose mutarotase Mame_04378 PF07729 FCD domain Mame_04378 PF00392 Bacterial regulatory proteins, gntR family Mame_04379 PF00005 ABC transporter Mame_04380 PF02653 Branched-chain amino acid transport system / permease component Mame_04381 PF02653 Branched-chain amino acid transport system / permease component Mame_04382 PF13407 Periplasmic binding protein domain Mame_04384 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_04384 PF14765 Polyketide synthase dehydratase Mame_04384 PF00550 Phosphopantetheine attachment site Mame_04384 PF08659 KR domain Mame_04384 PF00501 AMP-binding enzyme Mame_04384 PF13193 AMP-binding enzyme C-terminal domain Mame_04384 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_04384 PF16197 Ketoacyl-synthetase C-terminal extension Mame_04384 PF00668 Condensation domain Mame_04385 PF08659 KR domain Mame_04385 PF00501 AMP-binding enzyme Mame_04385 PF13193 AMP-binding enzyme C-terminal domain Mame_04385 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_04385 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_04385 PF00550 Phosphopantetheine attachment site Mame_04385 PF00668 Condensation domain Mame_04385 PF14765 Polyketide synthase dehydratase Mame_04385 PF16197 Ketoacyl-synthetase C-terminal extension Mame_04386 PF00550 Phosphopantetheine attachment site Mame_04386 PF13193 AMP-binding enzyme C-terminal domain Mame_04386 PF00668 Condensation domain Mame_04386 PF16197 Ketoacyl-synthetase C-terminal extension Mame_04386 PF00109 Beta-ketoacyl synthase, N-terminal domain Mame_04386 PF02801 Beta-ketoacyl synthase, C-terminal domain Mame_04386 PF08659 KR domain Mame_04386 PF00501 AMP-binding enzyme Mame_04386 PF14765 Polyketide synthase dehydratase Mame_04387 PF00501 AMP-binding enzyme Mame_04389 PF00535 Glycosyl transferase family 2 Mame_04389 PF02709 N-terminal domain of galactosyltransferase Mame_04391 PF13593 SBF-like CPA transporter family (DUF4137) Mame_04393 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04394 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04394 PF00005 ABC transporter Mame_04395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04395 PF00005 ABC transporter Mame_04398 PF00392 Bacterial regulatory proteins, gntR family Mame_04398 PF07729 FCD domain Mame_04401 PF01384 Phosphate transporter family Mame_04407 PF00356 Bacterial regulatory proteins, lacI family Mame_04408 PF08013 Tagatose 6 phosphate kinase Mame_04409 PF00294 pfkB family carbohydrate kinase Mame_04410 PF02653 Branched-chain amino acid transport system / permease component Mame_04411 PF00005 ABC transporter Mame_04414 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04415 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04416 PF00005 ABC transporter Mame_04416 PF08402 TOBE domain Mame_04417 PF00795 Carbon-nitrogen hydrolase Mame_04419 PF01979 Amidohydrolase family Mame_04419 PF13382 Adenine deaminase C-terminal domain Mame_04425 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Mame_04426 PF00440 Bacterial regulatory proteins, tetR family Mame_04429 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04430 PF05067 Manganese containing catalase Mame_04432 PF13247 4Fe-4S dicluster domain Mame_04432 PF00037 4Fe-4S binding domain Mame_04439 PF00116 Cytochrome C oxidase subunit II, periplasmic domain Mame_04439 PF02790 Cytochrome C oxidase subunit II, transmembrane domain Mame_04440 PF00115 Cytochrome C and Quinol oxidase polypeptide I Mame_04441 PF00510 Cytochrome c oxidase subunit III Mame_04444 PF01339 CheB methylesterase Mame_04444 PF01739 CheR methyltransferase, SAM binding domain Mame_04444 PF03705 CheR methyltransferase, all-alpha domain Mame_04444 PF08448 PAS fold Mame_04447 PF05974 Domain of unknown function (DUF892) Mame_04448 PF08281 Sigma-70, region 4 Mame_04448 PF04542 Sigma-70 region 2 Mame_04450 PF00067 Cytochrome P450 Mame_04459 PF00107 Zinc-binding dehydrogenase Mame_04459 PF08240 Alcohol dehydrogenase GroES-like domain Mame_04467 PF00080 Copper/zinc superoxide dismutase (SODC) Mame_04473 PF00440 Bacterial regulatory proteins, tetR family Mame_04474 PF00563 EAL domain Mame_04474 PF00990 Diguanylate cyclase, GGDEF domain Mame_04474 PF13188 PAS domain Mame_04474 PF03707 Bacterial signalling protein N terminal repeat Mame_04477 PF02082 Transcriptional regulator Mame_04480 PF07731 Multicopper oxidase Mame_04480 PF07732 Multicopper oxidase Mame_04480 PF00394 Multicopper oxidase Mame_04482 PF04945 YHS domain Mame_04486 PF13276 HTH-like domain Mame_04486 PF13683 Integrase core domain Mame_04488 PF01979 Amidohydrolase family Mame_04490 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04491 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04492 PF00480 ROK family Mame_04493 PF07702 UTRA domain Mame_04493 PF00392 Bacterial regulatory proteins, gntR family Mame_04494 PF13580 SIS domain Mame_04495 PF17912 MalK OB fold domain Mame_04495 PF00005 ABC transporter Mame_04496 PF00857 Isochorismatase family Mame_04498 PF00005 ABC transporter Mame_04499 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04501 PF00392 Bacterial regulatory proteins, gntR family Mame_04501 PF07729 FCD domain Mame_04503 PF02954 Bacterial regulatory protein, Fis family Mame_04503 PF01590 GAF domain Mame_04504 PF01968 Hydantoinase/oxoprolinase Mame_04504 PF05378 Hydantoinase/oxoprolinase N-terminal region Mame_04505 PF02538 Hydantoinase B/oxoprolinase Mame_04506 PF08882 Acetone carboxylase gamma subunit Mame_04507 PF08240 Alcohol dehydrogenase GroES-like domain Mame_04507 PF13823 Alcohol dehydrogenase GroES-associated Mame_04507 PF00107 Zinc-binding dehydrogenase Mame_04509 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_04510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04510 PF00005 ABC transporter Mame_04511 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_04511 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04512 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04513 PF01321 Creatinase/Prolidase N-terminal domain Mame_04513 PF00557 Metallopeptidase family M24 Mame_04514 PF02082 Transcriptional regulator Mame_04516 PF16901 C-terminal domain of alpha-glycerophosphate oxidase Mame_04516 PF01266 FAD dependent oxidoreductase Mame_04517 PF00370 FGGY family of carbohydrate kinases, N-terminal domain Mame_04517 PF02782 FGGY family of carbohydrate kinases, C-terminal domain Mame_04519 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04520 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04521 PF08402 TOBE domain Mame_04521 PF00005 ABC transporter Mame_04524 PF07885 Ion channel Mame_04524 PF02254 TrkA-N domain Mame_04526 PF05717 IS66 Orf2 like protein Mame_04527 PF13817 IS66 C-terminal element Mame_04527 PF03050 Transposase IS66 family Mame_04527 PF13005 zinc-finger binding domain of transposase IS66 Mame_04527 PF13007 Transposase C of IS166 homeodomain Mame_04529 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) Mame_04529 PF06594 Haemolysin-type calcium binding protein related domain Mame_04530 PF00664 ABC transporter transmembrane region Mame_04530 PF00005 ABC transporter Mame_04537 PF06165 Glycosyltransferase family 36 Mame_04537 PF10091 Putative glucoamylase Mame_04537 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain Mame_04540 PF03466 LysR substrate binding domain Mame_04540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04541 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion Mame_04541 PF00529 HlyD membrane-fusion protein of T1SS Mame_04542 PF00873 AcrB/AcrD/AcrF family Mame_04543 PF00072 Response regulator receiver domain Mame_04543 PF00486 Transcriptional regulatory protein, C terminal Mame_04544 PF00672 HAMP domain Mame_04544 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04544 PF00512 His Kinase A (phospho-acceptor) domain Mame_04546 PF00378 Enoyl-CoA hydratase/isomerase Mame_04549 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04549 PF03466 LysR substrate binding domain Mame_04551 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_04551 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_04551 PF01842 ACT domain Mame_04552 PF03401 Tripartite tricarboxylate transporter family receptor Mame_04553 PF01970 Tripartite tricarboxylate transporter TctA family Mame_04557 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_04557 PF00378 Enoyl-CoA hydratase/isomerase Mame_04557 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_04561 PF04909 Amidohydrolase Mame_04564 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04566 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_04567 PF03466 LysR substrate binding domain Mame_04567 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04569 PF00795 Carbon-nitrogen hydrolase Mame_04570 PF00795 Carbon-nitrogen hydrolase Mame_04572 PF00440 Bacterial regulatory proteins, tetR family Mame_04572 PF08360 QacR-like protein, C-terminal region Mame_04575 PF01970 Tripartite tricarboxylate transporter TctA family Mame_04577 PF03401 Tripartite tricarboxylate transporter family receptor Mame_04578 PF00392 Bacterial regulatory proteins, gntR family Mame_04578 PF07702 UTRA domain Mame_04579 PF00221 Aromatic amino acid lyase Mame_04580 PF04069 Substrate binding domain of ABC-type glycine betaine transport system Mame_04581 PF02423 Ornithine cyclodeaminase/mu-crystallin family Mame_04583 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04584 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04585 PF00571 CBS domain Mame_04585 PF00005 ABC transporter Mame_04586 PF02522 Aminoglycoside 3-N-acetyltransferase Mame_04590 PF01872 RibD C-terminal domain Mame_04591 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_04591 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_04593 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit Mame_04593 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase Mame_04594 PF01979 Amidohydrolase family Mame_04595 PF01614 Bacterial transcriptional regulator Mame_04595 PF09339 IclR helix-turn-helix domain Mame_04597 PF02515 CoA-transferase family III Mame_04601 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04602 PF00583 Acetyltransferase (GNAT) family Mame_04602 PF13380 CoA binding domain Mame_04602 PF13607 Succinyl-CoA ligase like flavodoxin domain Mame_04607 PF00890 FAD binding domain Mame_04607 PF14537 Cytochrome c3 Mame_04608 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_04608 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_04613 PF02653 Branched-chain amino acid transport system / permease component Mame_04614 PF11862 Domain of unknown function (DUF3382) Mame_04614 PF02653 Branched-chain amino acid transport system / permease component Mame_04615 PF12399 Branched-chain amino acid ATP-binding cassette transporter Mame_04615 PF00005 ABC transporter Mame_04616 PF00005 ABC transporter Mame_04617 PF00171 Aldehyde dehydrogenase family Mame_04618 PF01614 Bacterial transcriptional regulator Mame_04618 PF09339 IclR helix-turn-helix domain Mame_04620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_04621 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_04622 PF00155 Aminotransferase class I and II Mame_04623 PF13977 BetI-type transcriptional repressor, C-terminal Mame_04623 PF00440 Bacterial regulatory proteins, tetR family Mame_04627 PF00441 Acyl-CoA dehydrogenase, C-terminal domain Mame_04627 PF12806 Acetyl-CoA dehydrogenase C-terminal like Mame_04627 PF02770 Acyl-CoA dehydrogenase, middle domain Mame_04627 PF02771 Acyl-CoA dehydrogenase, N-terminal domain Mame_04628 PF00378 Enoyl-CoA hydratase/isomerase Mame_04628 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_04628 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_04629 PF00108 Thiolase, N-terminal domain Mame_04629 PF02803 Thiolase, C-terminal domain Mame_04630 PF13411 MerR HTH family regulatory protein Mame_04631 PF00501 AMP-binding enzyme Mame_04631 PF13193 AMP-binding enzyme C-terminal domain Mame_04633 PF00766 Electron transfer flavoprotein FAD-binding domain Mame_04633 PF01012 Electron transfer flavoprotein domain Mame_04634 PF01012 Electron transfer flavoprotein domain Mame_04635 PF01370 NAD dependent epimerase/dehydratase family Mame_04636 PF00106 short chain dehydrogenase Mame_04639 PF01970 Tripartite tricarboxylate transporter TctA family Mame_04640 PF09339 IclR helix-turn-helix domain Mame_04640 PF01614 Bacterial transcriptional regulator Mame_04641 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_04641 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_04641 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_04647 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04648 PF01037 Lrp/AsnC ligand binding domain Mame_04649 PF00456 Transketolase, thiamine diphosphate binding domain Mame_04649 PF17831 Pyruvate dehydrogenase E1 component middle domain Mame_04650 PF00364 Biotin-requiring enzyme Mame_04650 PF02817 e3 binding domain Mame_04650 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Mame_04651 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Mame_04651 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04653 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_04654 PF01494 FAD binding domain Mame_04655 PF00107 Zinc-binding dehydrogenase Mame_04655 PF08240 Alcohol dehydrogenase GroES-like domain Mame_04658 PF03737 Aldolase/RraA Mame_04659 PF01494 FAD binding domain Mame_04660 PF09339 IclR helix-turn-helix domain Mame_04660 PF01614 Bacterial transcriptional regulator Mame_04662 PF00392 Bacterial regulatory proteins, gntR family Mame_04662 PF07729 FCD domain Mame_04663 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_04665 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04667 PF00356 Bacterial regulatory proteins, lacI family Mame_04668 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_04669 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04670 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04670 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_04671 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04671 PF00005 ABC transporter Mame_04672 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04672 PF00005 ABC transporter Mame_04674 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_04674 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_04675 PF00132 Bacterial transferase hexapeptide (six repeats) Mame_04675 PF14602 Hexapeptide repeat of succinyl-transferase Mame_04675 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal Mame_04679 PF01527 Transposase Mame_04681 PF01047 MarR family Mame_04681 PF00480 ROK family Mame_04683 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04684 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04685 PF00005 ABC transporter Mame_04685 PF17912 MalK OB fold domain Mame_04686 PF03009 Glycerophosphoryl diester phosphodiesterase family Mame_04688 PF02696 Uncharacterized ACR, YdiU/UPF0061 family Mame_04690 PF02743 Cache domain Mame_04690 PF00512 His Kinase A (phospho-acceptor) domain Mame_04690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04691 PF00158 Sigma-54 interaction domain Mame_04691 PF02954 Bacterial regulatory protein, Fis family Mame_04691 PF00072 Response regulator receiver domain Mame_04692 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_04693 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component Mame_04694 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04695 PF09137 Glucodextranase, domain N Mame_04695 PF00723 Glycosyl hydrolases family 15 Mame_04696 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain Mame_04696 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_04697 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain Mame_04697 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain Mame_04700 PF03706 Lysylphosphatidylglycerol synthase TM region Mame_04701 PF02705 K+ potassium transporter Mame_04702 PF05336 L-rhamnose mutarotase Mame_04703 PF01261 Xylose isomerase-like TIM barrel Mame_04704 PF00596 Class II Aldolase and Adducin N-terminal domain Mame_04705 PF08220 DeoR-like helix-turn-helix domain Mame_04705 PF00455 DeoR C terminal sensor domain Mame_04706 PF13407 Periplasmic binding protein domain Mame_04707 PF00005 ABC transporter Mame_04708 PF02653 Branched-chain amino acid transport system / permease component Mame_04709 PF02653 Branched-chain amino acid transport system / permease component Mame_04711 PF00248 Aldo/keto reductase family Mame_04712 PF00392 Bacterial regulatory proteins, gntR family Mame_04712 PF07729 FCD domain Mame_04713 PF13378 Enolase C-terminal domain-like Mame_04713 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_04714 PF13416 Bacterial extracellular solute-binding protein Mame_04715 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04716 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04717 PF17912 MalK OB fold domain Mame_04717 PF00005 ABC transporter Mame_04720 PF02515 CoA-transferase family III Mame_04721 PF00378 Enoyl-CoA hydratase/isomerase Mame_04722 PF02653 Branched-chain amino acid transport system / permease component Mame_04724 PF00005 ABC transporter Mame_04726 PF00356 Bacterial regulatory proteins, lacI family Mame_04729 PF02515 CoA-transferase family III Mame_04731 PF03831 PhnA domain Mame_04731 PF08274 PhnA Zinc-Ribbon Mame_04732 PF05336 L-rhamnose mutarotase Mame_04736 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04737 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04739 PF13378 Enolase C-terminal domain-like Mame_04739 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_04741 PF13378 Enolase C-terminal domain-like Mame_04741 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_04742 PF01557 Fumarylacetoacetate (FAA) hydrolase family Mame_04744 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term Mame_04744 PF10727 Rossmann-like domain Mame_04745 PF07005 Sugar-binding N-terminal domain Mame_04745 PF17042 Nucleotide-binding C-terminal domain Mame_04746 PF00392 Bacterial regulatory proteins, gntR family Mame_04746 PF07729 FCD domain Mame_04748 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_04748 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_04749 PF02653 Branched-chain amino acid transport system / permease component Mame_04750 PF00005 ABC transporter Mame_04752 PF13407 Periplasmic binding protein domain Mame_04753 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain Mame_04753 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain Mame_04755 PF03466 LysR substrate binding domain Mame_04755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04756 PF05368 NmrA-like family Mame_04759 PF08220 DeoR-like helix-turn-helix domain Mame_04759 PF00455 DeoR C terminal sensor domain Mame_04760 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_04763 PF00106 short chain dehydrogenase Mame_04763 PF00300 Histidine phosphatase superfamily (branch 1) Mame_04764 PF01266 FAD dependent oxidoreductase Mame_04765 PF01968 Hydantoinase/oxoprolinase Mame_04765 PF05378 Hydantoinase/oxoprolinase N-terminal region Mame_04768 PF00356 Bacterial regulatory proteins, lacI family Mame_04769 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Mame_04770 PF00248 Aldo/keto reductase family Mame_04771 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04772 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04773 PF08402 TOBE domain Mame_04773 PF00005 ABC transporter Mame_04774 PF01547 Bacterial extracellular solute-binding protein Mame_04778 PF03737 Aldolase/RraA Mame_04779 PF03459 TOBE domain Mame_04779 PF00005 ABC transporter Mame_04779 PF17912 MalK OB fold domain Mame_04780 PF00248 Aldo/keto reductase family Mame_04781 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04782 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04783 PF13416 Bacterial extracellular solute-binding protein Mame_04784 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_04784 PF13378 Enolase C-terminal domain-like Mame_04785 PF01614 Bacterial transcriptional regulator Mame_04785 PF09339 IclR helix-turn-helix domain Mame_04786 PF13378 Enolase C-terminal domain-like Mame_04786 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_04788 PF00535 Glycosyl transferase family 2 Mame_04790 PF00072 Response regulator receiver domain Mame_04790 PF00486 Transcriptional regulatory protein, C terminal Mame_04791 PF00512 His Kinase A (phospho-acceptor) domain Mame_04791 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04791 PF00672 HAMP domain Mame_04795 PF00291 Pyridoxal-phosphate dependent enzyme Mame_04798 PF05368 NmrA-like family Mame_04799 PF01638 HxlR-like helix-turn-helix Mame_04801 PF03466 LysR substrate binding domain Mame_04801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04805 PF01970 Tripartite tricarboxylate transporter TctA family Mame_04806 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_04806 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_04807 PF01381 Helix-turn-helix Mame_04809 PF03466 LysR substrate binding domain Mame_04809 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04811 PF01638 HxlR-like helix-turn-helix Mame_04816 PF00480 ROK family Mame_04817 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04818 PF00005 ABC transporter Mame_04819 PF09084 NMT1/THI5 like Mame_04820 PF16347 Domain of unknown function (DUF4976) Mame_04820 PF00884 Sulfatase Mame_04822 PF08402 TOBE domain Mame_04822 PF00005 ABC transporter Mame_04823 PF12411 Choline sulfatase enzyme C terminal Mame_04823 PF00884 Sulfatase Mame_04824 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04825 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04828 PF12802 MarR family Mame_04830 PF13533 Biotin-lipoyl like Mame_04834 PF00005 ABC transporter Mame_04836 PF00701 Dihydrodipicolinate synthetase family Mame_04837 PF01113 Dihydrodipicolinate reductase, N-terminus Mame_04837 PF05173 Dihydrodipicolinate reductase, C-terminus Mame_04838 PF00171 Aldehyde dehydrogenase family Mame_04839 PF17806 Sarcosine oxidase A3 domain Mame_04839 PF07992 Pyridine nucleotide-disulphide oxidoreductase Mame_04841 PF01266 FAD dependent oxidoreductase Mame_04842 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_04842 PF03466 LysR substrate binding domain Mame_04847 PF12852 Cupin Mame_04847 PF12833 Helix-turn-helix domain Mame_04848 PF00106 short chain dehydrogenase Mame_04850 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family Mame_04851 PF02082 Transcriptional regulator Mame_04853 PF01042 Endoribonuclease L-PSP Mame_04856 PF13407 Periplasmic binding protein domain Mame_04857 PF02653 Branched-chain amino acid transport system / permease component Mame_04858 PF00005 ABC transporter Mame_04859 PF07729 FCD domain Mame_04859 PF00392 Bacterial regulatory proteins, gntR family Mame_04860 PF02615 Malate/L-lactate dehydrogenase Mame_04861 PF00465 Iron-containing alcohol dehydrogenase Mame_04862 PF00171 Aldehyde dehydrogenase family Mame_04864 PF00392 Bacterial regulatory proteins, gntR family Mame_04865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_04867 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04868 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_04868 PF00528 Binding-protein-dependent transport system inner membrane component Mame_04869 PF00005 ABC transporter Mame_04869 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_04870 PF01261 Xylose isomerase-like TIM barrel Mame_04871 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase Mame_04871 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase Mame_04872 PF02371 Transposase IS116/IS110/IS902 family Mame_04872 PF01548 Transposase Mame_04873 PF02449 Beta-galactosidase Mame_04873 PF08533 Beta-galactosidase C-terminal domain Mame_04873 PF08532 Beta-galactosidase trimerisation domain Mame_04875 PF13491 4TM region of DNA translocase FtsK/SpoIIIE Mame_04875 PF17854 FtsK alpha domain Mame_04875 PF09397 Ftsk gamma domain Mame_04875 PF01580 FtsK/SpoIIIE family Mame_04876 PF04397 LytTr DNA-binding domain Mame_04876 PF00072 Response regulator receiver domain Mame_04877 PF06580 Histidine kinase Mame_04877 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_04880 PF13614 AAA domain Mame_04882 PF11800 Replication protein C C-terminal region Mame_04882 PF03428 Replication protein C N-terminal domain Mame_04887 PF00436 Single-strand binding protein family Mame_04888 PF01545 Cation efflux family Mame_04890 PF04002 RadC-like JAB domain Mame_04896 PF02371 Transposase IS116/IS110/IS902 family Mame_04896 PF01548 Transposase Mame_04906 PF05406 WGR domain Mame_04908 PF00271 Helicase conserved C-terminal domain Mame_04908 PF00176 SNF2 family N-terminal domain Mame_04910 PF00271 Helicase conserved C-terminal domain Mame_04910 PF09369 Domain of unknown function (DUF1998) Mame_04910 PF00270 DEAD/DEAH box helicase Mame_04912 PF12728 Helix-turn-helix domain Mame_04912 PF02661 Fic/DOC family Mame_04918 PF02534 Type IV secretory system Conjugative DNA transfer Mame_04924 PF00437 Type II/IV secretion system protein Mame_04925 PF03743 Bacterial conjugation TrbI-like protein Mame_04929 PF01464 Transglycosylase SLT domain Mame_04929 PF10145 Phage-related minor tail protein Mame_04929 PF01551 Peptidase family M23 Mame_04931 PF03135 CagE, TrbE, VirB family, component of type IV transporter system Mame_04934 PF10145 Phage-related minor tail protein Mame_04934 PF01551 Peptidase family M23 Mame_04934 PF01464 Transglycosylase SLT domain Mame_04939 PF00665 Integrase core domain Mame_04940 PF01695 IstB-like ATP binding protein Mame_04941 PF00589 Phage integrase family Mame_04943 PF05973 Phage derived protein Gp49-like (DUF891) Mame_04944 PF11800 Replication protein C C-terminal region Mame_04944 PF03428 Replication protein C N-terminal domain Mame_04945 PF07506 RepB plasmid partitioning protein Mame_04945 PF02195 ParB-like nuclease domain Mame_04946 PF13614 AAA domain Mame_04947 PF01476 LysM domain Mame_04947 PF03734 L,D-transpeptidase catalytic domain Mame_04952 PF01850 PIN domain Mame_04956 PF18818 Metallopeptidase superfamily domain Mame_04956 PF13362 Toprim domain Mame_04956 PF08401 Domain of unknown function (DUF1738) Mame_04979 PF02630 SCO1/SenC Mame_04981 PF00403 Heavy-metal-associated domain Mame_04982 PF00376 MerR family regulatory protein Mame_04982 PF09278 MerR, DNA binding Mame_04983 PF02694 Uncharacterised BCR, YnfA/UPF0060 family Mame_04985 PF00437 Type II/IV secretion system protein Mame_04988 PF17841 BID domain of Bartonella effector protein (Bep) Mame_04988 PF03389 MobA/MobL family Mame_04988 PF01443 Viral (Superfamily 1) RNA helicase Mame_04989 PF07820 TraC-like protein Mame_04990 PF06412 Conjugal transfer protein TraD Mame_04992 PF05406 WGR domain Mame_04993 PF01381 Helix-turn-helix Mame_04994 PF05973 Phage derived protein Gp49-like (DUF891) Mame_04996 PF02661 Fic/DOC family Mame_04996 PF18543 Intracellular delivery domain Mame_05000 PF03960 ArsC family Mame_05001 PF03358 NADPH-dependent FMN reductase Mame_05002 PF02040 Arsenical pump membrane protein Mame_05004 PF00486 Transcriptional regulatory protein, C terminal Mame_05004 PF00072 Response regulator receiver domain Mame_05005 PF01895 PhoU domain Mame_05006 PF00005 ABC transporter Mame_05009 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Mame_05012 PF09278 MerR, DNA binding Mame_05012 PF00376 MerR family regulatory protein Mame_05013 PF00403 Heavy-metal-associated domain Mame_05015 PF13462 Thioredoxin Mame_05015 PF06965 Na+/H+ antiporter 1 Mame_05017 PF10518 TAT (twin-arginine translocation) pathway signal sequence Mame_05017 PF00394 Multicopper oxidase Mame_05017 PF07732 Multicopper oxidase Mame_05017 PF07731 Multicopper oxidase Mame_05018 PF13442 Cytochrome C oxidase, cbb3-type, subunit III Mame_05018 PF00034 Cytochrome c Mame_05022 PF03734 L,D-transpeptidase catalytic domain Mame_05026 PF01545 Cation efflux family Mame_05030 PF03918 Cytochrome C biogenesis protein Mame_05031 PF08534 Redoxin Mame_05032 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal Mame_05032 PF01578 Cytochrome C assembly protein Mame_05035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Mame_05035 PF00512 His Kinase A (phospho-acceptor) domain Mame_05035 PF00672 HAMP domain Mame_05036 PF00072 Response regulator receiver domain Mame_05036 PF00486 Transcriptional regulatory protein, C terminal Mame_05041 PF09335 SNARE associated Golgi protein Mame_05042 PF01790 Prolipoprotein diacylglyceryl transferase Mame_05043 PF07298 NnrU protein Mame_05044 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Mame_05044 PF00753 Metallo-beta-lactamase superfamily Mame_05044 PF10996 Beta-Casp domain Mame_05045 PF02885 Glycosyl transferase family, helical bundle domain Mame_05045 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain Mame_05045 PF00591 Glycosyl transferase family, a/b domain Mame_05046 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase Mame_05046 PF14572 Phosphoribosyl synthetase-associated domain Mame_05047 PF04945 YHS domain Mame_05051 PF00665 Integrase core domain Mame_05053 PF01695 IstB-like ATP binding protein Mame_05058 PF01252 Signal peptidase (SPase) II Mame_05059 PF02683 Cytochrome C biogenesis protein transmembrane region Mame_05060 PF02630 SCO1/SenC Mame_05061 PF01545 Cation efflux family Mame_05062 PF00403 Heavy-metal-associated domain Mame_05063 PF02600 Disulfide bond formation protein DsbB Mame_05064 PF01548 Transposase Mame_05064 PF02371 Transposase IS116/IS110/IS902 family Mame_05065 PF00665 Integrase core domain Mame_05067 PF00665 Integrase core domain Mame_05070 PF00005 ABC transporter Mame_05071 PF13533 Biotin-lipoyl like Mame_05074 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Mame_05074 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Mame_05075 PF00872 Transposase, Mutator family Mame_05082 PF13005 zinc-finger binding domain of transposase IS66 Mame_05082 PF03050 Transposase IS66 family Mame_05082 PF13817 IS66 C-terminal element Mame_05082 PF13007 Transposase C of IS166 homeodomain Mame_05083 PF00480 ROK family Mame_05086 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_05088 PF00857 Isochorismatase family Mame_05093 PF09084 NMT1/THI5 like Mame_05094 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_05094 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_05095 PF00970 Oxidoreductase FAD-binding domain Mame_05095 PF00111 2Fe-2S iron-sulfur cluster binding domain Mame_05095 PF00175 Oxidoreductase NAD-binding domain Mame_05096 PF00355 Rieske [2Fe-2S] domain Mame_05098 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Mame_05098 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Mame_05099 PF00171 Aldehyde dehydrogenase family Mame_05100 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_05102 PF03480 Bacterial extracellular solute-binding protein, family 7 Mame_05104 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component Mame_05107 PF02371 Transposase IS116/IS110/IS902 family Mame_05107 PF01548 Transposase Mame_05110 PF13737 Transposase DDE domain Mame_05114 PF12728 Helix-turn-helix domain Mame_05116 PF00239 Resolvase, N terminal domain Mame_05119 PF00376 MerR family regulatory protein Mame_05119 PF13614 AAA domain Mame_05120 PF07506 RepB plasmid partitioning protein Mame_05120 PF02195 ParB-like nuclease domain Mame_05121 PF11800 Replication protein C C-terminal region Mame_05121 PF03428 Replication protein C N-terminal domain Mame_05124 PF01850 PIN domain Mame_05126 PF00589 Phage integrase family Mame_05128 PF04079 Segregation and condensation complex subunit ScpB Mame_05133 PF07756 Protein of unknown function (DUF1612) Mame_05133 PF11972 HTH DNA binding domain Mame_05134 PF07756 Protein of unknown function (DUF1612) Mame_05134 PF11972 HTH DNA binding domain Mame_05136 PF13808 DDE_Tnp_1-associated Mame_05136 PF01609 Transposase DDE domain Mame_05137 PF18370 Rhamnogalacturonan I lyases beta-sheet domain Mame_05137 PF01839 FG-GAP repeat Mame_05138 PF00005 ABC transporter Mame_05138 PF00664 ABC transporter transmembrane region Mame_05140 PF01261 Xylose isomerase-like TIM barrel Mame_05143 PF01547 Bacterial extracellular solute-binding protein Mame_05144 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05145 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05146 PF08240 Alcohol dehydrogenase GroES-like domain Mame_05146 PF00107 Zinc-binding dehydrogenase Mame_05148 PF01565 FAD binding domain Mame_05148 PF09330 D-lactate dehydrogenase, membrane binding Mame_05149 PF17912 MalK OB fold domain Mame_05149 PF00005 ABC transporter Mame_05149 PF03459 TOBE domain Mame_05150 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_05150 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_05151 PF13378 Enolase C-terminal domain-like Mame_05151 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_05152 PF13378 Enolase C-terminal domain-like Mame_05152 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_05153 PF08352 Oligopeptide/dipeptide transporter, C-terminal region Mame_05153 PF00005 ABC transporter Mame_05154 PF12911 N-terminal TM domain of oligopeptide transport permease C Mame_05154 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05155 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05156 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle Mame_05157 PF00392 Bacterial regulatory proteins, gntR family Mame_05157 PF07729 FCD domain Mame_05162 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05163 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05164 PF00005 ABC transporter Mame_05165 PF00291 Pyridoxal-phosphate dependent enzyme Mame_05166 PF00155 Aminotransferase class I and II Mame_05174 PF01425 Amidase Mame_05178 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05179 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05180 PF00005 ABC transporter Mame_05180 PF17912 MalK OB fold domain Mame_05181 PF13407 Periplasmic binding protein domain Mame_05181 PF00356 Bacterial regulatory proteins, lacI family Mame_05183 PF08241 Methyltransferase domain Mame_05183 PF12697 Alpha/beta hydrolase family Mame_05188 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05189 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05190 PF03459 TOBE domain Mame_05190 PF17912 MalK OB fold domain Mame_05190 PF00005 ABC transporter Mame_05191 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_05191 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_05193 PF00884 Sulfatase Mame_05193 PF16347 Domain of unknown function (DUF4976) Mame_05194 PF00884 Sulfatase Mame_05194 PF16347 Domain of unknown function (DUF4976) Mame_05195 PF16347 Domain of unknown function (DUF4976) Mame_05195 PF00884 Sulfatase Mame_05200 PF01370 NAD dependent epimerase/dehydratase family Mame_05202 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_05202 PF03466 LysR substrate binding domain Mame_05205 PF03466 LysR substrate binding domain Mame_05205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_05207 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family Mame_05207 PF03466 LysR substrate binding domain Mame_05208 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain Mame_05208 PF00753 Metallo-beta-lactamase superfamily Mame_05208 PF10996 Beta-Casp domain Mame_05209 PF00775 Dioxygenase Mame_05209 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal Mame_05212 PF00398 Ribosomal RNA adenine dimethylase Mame_05215 PF07690 Major Facilitator Superfamily Mame_05216 PF06719 AraC-type transcriptional regulator N-terminus Mame_05216 PF12833 Helix-turn-helix domain Mame_05220 PF08240 Alcohol dehydrogenase GroES-like domain Mame_05220 PF00107 Zinc-binding dehydrogenase Mame_05221 PF01638 HxlR-like helix-turn-helix Mame_05225 PF00356 Bacterial regulatory proteins, lacI family Mame_05226 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase Mame_05227 PF13580 SIS domain Mame_05231 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05232 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05234 PF00005 ABC transporter Mame_05234 PF17912 MalK OB fold domain Mame_05234 PF03459 TOBE domain Mame_05236 PF13276 HTH-like domain Mame_05236 PF13683 Integrase core domain Mame_05241 PF13378 Enolase C-terminal domain-like Mame_05241 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Mame_05245 PF00920 Dehydratase family Mame_05247 PF01970 Tripartite tricarboxylate transporter TctA family Mame_05249 PF03401 Tripartite tricarboxylate transporter family receptor Mame_05253 PF00171 Aldehyde dehydrogenase family Mame_05254 PF00701 Dihydrodipicolinate synthetase family Mame_05255 PF01842 ACT domain Mame_05255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Mame_05255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain Mame_05256 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Mame_05256 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain Mame_05256 PF00205 Thiamine pyrophosphate enzyme, central domain Mame_05257 PF00920 Dehydratase family Mame_05260 PF00356 Bacterial regulatory proteins, lacI family Mame_05262 PF02894 Oxidoreductase family, C-terminal alpha/beta domain Mame_05262 PF01408 Oxidoreductase family, NAD-binding Rossmann fold Mame_05264 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05265 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05266 PF00005 ABC transporter Mame_05266 PF17912 MalK OB fold domain Mame_05266 PF03459 TOBE domain Mame_05269 PF00005 ABC transporter Mame_05269 PF17912 MalK OB fold domain Mame_05270 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05271 PF00528 Binding-protein-dependent transport system inner membrane component Mame_05273 PF00356 Bacterial regulatory proteins, lacI family