locus-tag class description AM586_00005 PF11638 DnaA N-terminal domain AM586_00005 PF00308 Bacterial dnaA protein AM586_00005 PF08299 Bacterial dnaA protein helix-turn-helix AM586_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AM586_00010 PF02767 DNA polymerase III beta subunit, central domain AM586_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AM586_00015 PF01751 Toprim domain AM586_00015 PF18053 DNA gyrase B subunit insert domain AM586_00015 PF00986 DNA gyrase B subunit, carboxyl terminus AM586_00015 PF00204 DNA gyrase B AM586_00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_00040 PF13419 Haloacid dehalogenase-like hydrolase AM586_00055 PF07869 Protein of unknown function (DUF1656) AM586_00060 PF13533 Biotin-lipoyl like AM586_00070 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_00070 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_00075 PF00941 FAD binding domain in molybdopterin dehydrogenase AM586_00075 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM586_00085 PF01139 tRNA-splicing ligase RtcB AM586_00095 PF01569 PAP2 superfamily AM586_00100 PF00248 Aldo/keto reductase family AM586_00110 PF01227 GTP cyclohydrolase I AM586_00120 PF00293 NUDIX domain AM586_00120 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain AM586_00120 PF09297 NADH pyrophosphatase zinc ribbon domain AM586_00125 PF16861 Carbamoyltransferase C-terminus AM586_00125 PF02543 Carbamoyltransferase N-terminus AM586_00150 PF07690 Major Facilitator Superfamily AM586_00155 PF00232 Glycosyl hydrolase family 1 AM586_00160 PF00561 alpha/beta hydrolase fold AM586_00170 PF00436 Single-strand binding protein family AM586_00175 PF17755 UvrA DNA-binding domain AM586_00175 PF17760 UvrA interaction domain AM586_00180 PF03575 Peptidase family S51 AM586_00185 PF07715 TonB-dependent Receptor Plug Domain AM586_00185 PF00593 TonB dependent receptor AM586_00190 PF01418 Helix-turn-helix domain, rpiR family AM586_00190 PF01380 SIS domain AM586_00200 PF03606 C4-dicarboxylate anaerobic carrier AM586_00205 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain AM586_00205 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain AM586_00210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_00210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_00225 PF00199 Catalase AM586_00225 PF06628 Catalase-related immune-responsive AM586_00230 PF04381 Putative exonuclease, RdgC AM586_00235 PF11799 impB/mucB/samB family C-terminal domain AM586_00235 PF00817 impB/mucB/samB family AM586_00240 PF04151 Bacterial pre-peptidase C-terminal domain AM586_00240 PF00082 Subtilase family AM586_00245 PF04151 Bacterial pre-peptidase C-terminal domain AM586_00245 PF00082 Subtilase family AM586_00250 PF00593 TonB dependent receptor AM586_00250 PF07715 TonB-dependent Receptor Plug Domain AM586_00265 PF00072 Response regulator receiver domain AM586_00265 PF00990 Diguanylate cyclase, GGDEF domain AM586_00270 PF00027 Cyclic nucleotide-binding domain AM586_00270 PF07885 Ion channel AM586_00280 PF08497 Radical SAM N-terminal AM586_00280 PF04055 Radical SAM superfamily AM586_00280 PF11842 Domain of unknown function (DUF3362) AM586_00290 PF09905 DNA-binding protein VF530 AM586_00295 PF01432 Peptidase family M3 AM586_00300 PF01432 Peptidase family M3 AM586_00330 PF04102 SlyX AM586_00340 PF13361 UvrD-like helicase C-terminal domain AM586_00340 PF00580 UvrD/REP helicase N-terminal domain AM586_00350 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM586_00350 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_00360 PF18074 Primosomal protein N C-terminal domain AM586_00360 PF17764 3′ DNA-binding domain (3′BD) AM586_00360 PF00271 Helicase conserved C-terminal domain AM586_00360 PF00270 DEAD/DEAH box helicase AM586_00360 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM586_00365 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM586_00375 PF00176 SNF2 family N-terminal domain AM586_00375 PF12419 SNF2 Helicase protein AM586_00375 PF00271 Helicase conserved C-terminal domain AM586_00395 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_00400 PF00902 Sec-independent protein translocase protein (TatC) AM586_00405 PF02416 mttA/Hcf106 family AM586_00410 PF02416 mttA/Hcf106 family AM586_00420 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM586_00425 PF01502 Phosphoribosyl-AMP cyclohydrolase AM586_00430 PF00977 Histidine biosynthesis protein AM586_00435 PF00977 Histidine biosynthesis protein AM586_00440 PF00117 Glutamine amidotransferase class-I AM586_00445 PF00475 Imidazoleglycerol-phosphate dehydratase AM586_00455 PF01555 DNA methylase AM586_00460 PF00815 Histidinol dehydrogenase AM586_00465 PF01634 ATP phosphoribosyltransferase AM586_00470 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM586_00475 PF01722 BolA-like protein AM586_00480 PF01061 ABC-2 type transporter AM586_00485 PF00005 ABC transporter AM586_00510 PF02405 Permease MlaE AM586_00515 PF00005 ABC transporter AM586_00520 PF01738 Dienelactone hydrolase family AM586_00520 PF00156 Phosphoribosyl transferase domain AM586_00525 PF09587 Bacterial capsule synthesis protein PGA_cap AM586_00530 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_00530 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM586_00535 PF01493 GXGXG motif AM586_00535 PF01645 Conserved region in glutamate synthase AM586_00535 PF00310 Glutamine amidotransferases class-II AM586_00535 PF04898 Glutamate synthase central domain AM586_00555 PF00072 Response regulator receiver domain AM586_00555 PF00486 Transcriptional regulatory protein, C terminal AM586_00560 PF07689 KaiB domain AM586_00560 PF00512 His Kinase A (phospho-acceptor) domain AM586_00560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_00565 PF12419 SNF2 Helicase protein AM586_00565 PF00271 Helicase conserved C-terminal domain AM586_00565 PF00176 SNF2 family N-terminal domain AM586_00570 PF00575 S1 RNA binding domain AM586_00570 PF17674 HHH domain AM586_00570 PF09371 Tex-like protein N-terminal domain AM586_00570 PF16921 Tex protein YqgF-like domain AM586_00575 PF00462 Glutaredoxin AM586_00580 PF02441 Flavoprotein AM586_00590 PF00753 Metallo-beta-lactamase superfamily AM586_00595 PF13411 MerR HTH family regulatory protein AM586_00600 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_00600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_00600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_00605 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM586_00610 PF02803 Thiolase, C-terminal domain AM586_00610 PF00108 Thiolase, N-terminal domain AM586_00620 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_00620 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_00620 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_00630 PF08240 Alcohol dehydrogenase GroES-like domain AM586_00630 PF00107 Zinc-binding dehydrogenase AM586_00655 PF02016 LD-carboxypeptidase N-terminal domain AM586_00655 PF17676 LD-carboxypeptidase C-terminal domain AM586_00660 PF00593 TonB dependent receptor AM586_00660 PF07715 TonB-dependent Receptor Plug Domain AM586_00670 PF02954 Bacterial regulatory protein, Fis family AM586_00670 PF00072 Response regulator receiver domain AM586_00670 PF00158 Sigma-54 interaction domain AM586_00675 PF02743 Cache domain AM586_00675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_00675 PF00512 His Kinase A (phospho-acceptor) domain AM586_00680 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_00680 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_00680 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_00685 PF00005 ABC transporter AM586_00690 PF00528 Binding-protein-dependent transport system inner membrane component AM586_00700 PF07670 Nucleoside recognition AM586_00720 PF01427 D-ala-D-ala dipeptidase AM586_00725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_00725 PF03466 LysR substrate binding domain AM586_00730 PF01510 N-acetylmuramoyl-L-alanine amidase AM586_00740 PF02638 Glycosyl hydrolase-like 10 AM586_00755 PF13580 SIS domain AM586_00760 PF00144 Beta-lactamase AM586_00765 PF01266 FAD dependent oxidoreductase AM586_00775 PF01039 Carboxyl transferase domain AM586_00780 PF00378 Enoyl-CoA hydratase/isomerase AM586_00785 PF00202 Aminotransferase class-III AM586_00790 PF00155 Aminotransferase class I and II AM586_00800 PF06968 Biotin and Thiamin Synthesis associated domain AM586_00800 PF04055 Radical SAM superfamily AM586_00805 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM586_00805 PF00364 Biotin-requiring enzyme AM586_00805 PF00289 Biotin carboxylase, N-terminal domain AM586_00805 PF02785 Biotin carboxylase C-terminal domain AM586_00810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_00815 PF00682 HMGL-like AM586_00830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM586_00840 PF02021 Uncharacterised protein family UPF0102 AM586_00845 PF13580 SIS domain AM586_00855 PF00578 AhpC/TSA family AM586_00875 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM586_00875 PF04055 Radical SAM superfamily AM586_00880 PF03099 Biotin/lipoate A/B protein ligase family AM586_00885 PF04359 Protein of unknown function (DUF493) AM586_00895 PF01810 LysE type translocator AM586_00900 PF00216 Bacterial DNA-binding protein AM586_00910 PF05661 Protein of unknown function (DUF808) AM586_00915 PF07715 TonB-dependent Receptor Plug Domain AM586_00915 PF00593 TonB dependent receptor AM586_00925 PF08240 Alcohol dehydrogenase GroES-like domain AM586_00925 PF00107 Zinc-binding dehydrogenase AM586_00940 PF01323 DSBA-like thioredoxin domain AM586_00950 PF01810 LysE type translocator AM586_00955 PF03466 LysR substrate binding domain AM586_00955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_00980 PF00264 Common central domain of tyrosinase AM586_00985 PF03971 Monomeric isocitrate dehydrogenase AM586_01010 PF06745 KaiC AM586_01015 PF00072 Response regulator receiver domain AM586_01015 PF13188 PAS domain AM586_01015 PF08448 PAS fold AM586_01015 PF00512 His Kinase A (phospho-acceptor) domain AM586_01015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_01020 PF06745 KaiC AM586_01040 PF06772 Bacterial low temperature requirement A protein (LtrA) AM586_01050 PF12146 Serine aminopeptidase, S33 AM586_01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_01055 PF03466 LysR substrate binding domain AM586_01060 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_01075 PF00355 Rieske [2Fe-2S] domain AM586_01080 PF01810 LysE type translocator AM586_01085 PF01380 SIS domain AM586_01090 PF01037 Lrp/AsnC ligand binding domain AM586_01095 PF14602 Hexapeptide repeat of succinyl-transferase AM586_01095 PF12804 MobA-like NTP transferase domain AM586_01095 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_01110 PF01467 Cytidylyltransferase-like AM586_01115 PF00037 4Fe-4S binding domain AM586_01120 PF02203 Tar ligand binding domain homologue AM586_01120 PF00672 HAMP domain AM586_01120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_01135 PF03466 LysR substrate binding domain AM586_01135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_01140 PF01037 Lrp/AsnC ligand binding domain AM586_01145 PF00171 Aldehyde dehydrogenase family AM586_01145 PF01619 Proline dehydrogenase AM586_01145 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM586_01145 PF14850 DNA-binding domain of Proline dehydrogenase AM586_01150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM586_01150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM586_01155 PF01048 Phosphorylase superfamily AM586_01160 PF05199 GMC oxidoreductase AM586_01160 PF00732 GMC oxidoreductase AM586_01165 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_01165 PF00005 ABC transporter AM586_01170 PF00005 ABC transporter AM586_01180 PF02653 Branched-chain amino acid transport system / permease component AM586_01185 PF02653 Branched-chain amino acid transport system / permease component AM586_01190 PF00561 alpha/beta hydrolase fold AM586_01195 PF00465 Iron-containing alcohol dehydrogenase AM586_01200 PF01925 Sulfite exporter TauE/SafE AM586_01205 PF01134 Glucose inhibited division protein A AM586_01205 PF13932 GidA associated domain AM586_01210 PF02527 rRNA small subunit methyltransferase G AM586_01215 PF13614 AAA domain AM586_01220 PF17762 HTH domain found in ParB protein AM586_01220 PF02195 ParB-like nuclease domain AM586_01230 PF00119 ATP synthase A chain AM586_01235 PF00137 ATP synthase subunit C AM586_01240 PF00430 ATP synthase B/B' CF(0) AM586_01245 PF00213 ATP synthase delta (OSCP) subunit AM586_01250 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM586_01250 PF00306 ATP synthase alpha/beta chain, C terminal domain AM586_01250 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM586_01255 PF00231 ATP synthase AM586_01260 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM586_01260 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM586_01265 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM586_01265 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM586_01270 PF01625 Peptide methionine sulfoxide reductase AM586_01280 PF13380 CoA binding domain AM586_01285 PF03976 Polyphosphate kinase 2 (PPK2) AM586_01290 PF00255 Glutathione peroxidase AM586_01295 PF00117 Glutamine amidotransferase class-I AM586_01295 PF04715 Anthranilate synthase component I, N terminal region AM586_01295 PF00425 chorismate binding enzyme AM586_01300 PF00440 Bacterial regulatory proteins, tetR family AM586_01320 PF00696 Amino acid kinase family AM586_01325 PF10503 Esterase PHB depolymerase AM586_01345 PF03060 Nitronate monooxygenase AM586_01355 PF01321 Creatinase/Prolidase N-terminal domain AM586_01355 PF00557 Metallopeptidase family M24 AM586_01365 PF02308 MgtC family AM586_01410 PF13333 Integrase core domain AM586_01410 PF00665 Integrase core domain AM586_01410 PF13276 HTH-like domain AM586_01420 PF12848 ABC transporter AM586_01420 PF00005 ABC transporter AM586_01425 PF00892 EamA-like transporter family AM586_01430 PF02705 K+ potassium transporter AM586_01435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_01450 PF02687 FtsX-like permease family AM586_01450 PF12704 MacB-like periplasmic core domain AM586_01450 PF00005 ABC transporter AM586_01455 PF00529 HlyD membrane-fusion protein of T1SS AM586_01455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_01460 PF00158 Sigma-54 interaction domain AM586_01460 PF00072 Response regulator receiver domain AM586_01460 PF02954 Bacterial regulatory protein, Fis family AM586_01465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_01465 PF00512 His Kinase A (phospho-acceptor) domain AM586_01470 PF00083 Sugar (and other) transporter AM586_01475 PF13673 Acetyltransferase (GNAT) domain AM586_01480 PF00850 Histone deacetylase domain AM586_01485 PF04262 Glutamate-cysteine ligase AM586_01495 PF17827 PrmC N-terminal domain AM586_01495 PF05175 Methyltransferase small domain AM586_01500 PF02600 Disulfide bond formation protein DsbB AM586_01505 PF00472 RF-1 domain AM586_01505 PF03462 PCRF domain AM586_01510 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM586_01510 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM586_01510 PF01488 Shikimate / quinate 5-dehydrogenase AM586_01515 PF00486 Transcriptional regulatory protein, C terminal AM586_01515 PF00072 Response regulator receiver domain AM586_01525 PF03776 Septum formation topological specificity factor MinE AM586_01530 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM586_01535 PF03775 Septum formation inhibitor MinC, C-terminal domain AM586_01535 PF05209 Septum formation inhibitor MinC, N-terminal domain AM586_01540 PF00108 Thiolase, N-terminal domain AM586_01540 PF02803 Thiolase, C-terminal domain AM586_01545 PF00106 short chain dehydrogenase AM586_01560 PF00561 alpha/beta hydrolase fold AM586_01575 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_01575 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_01590 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM586_01590 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM586_01595 PF03572 Peptidase family S41 AM586_01595 PF13180 PDZ domain AM586_01600 PF01370 NAD dependent epimerase/dehydratase family AM586_01600 PF02911 Formyl transferase, C-terminal domain AM586_01600 PF00551 Formyl transferase AM586_01610 PF00593 TonB dependent receptor AM586_01610 PF07715 TonB-dependent Receptor Plug Domain AM586_01615 PF01431 Peptidase family M13 AM586_01615 PF05649 Peptidase family M13 AM586_01620 PF01431 Peptidase family M13 AM586_01620 PF05649 Peptidase family M13 AM586_01635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_01650 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM586_01650 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM586_01650 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM586_01655 PF01370 NAD dependent epimerase/dehydratase family AM586_01660 PF02397 Bacterial sugar transferase AM586_01665 PF00989 PAS fold AM586_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_01665 PF17203 Single cache domain 3 AM586_01665 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM586_01670 PF00072 Response regulator receiver domain AM586_01670 PF02954 Bacterial regulatory protein, Fis family AM586_01670 PF00158 Sigma-54 interaction domain AM586_01700 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM586_01705 PF00501 AMP-binding enzyme AM586_01705 PF13193 AMP-binding enzyme C-terminal domain AM586_01705 PF00668 Condensation domain AM586_01705 PF00550 Phosphopantetheine attachment site AM586_01710 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM586_01710 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM586_01720 PF14667 Polysaccharide biosynthesis C-terminal domain AM586_01740 PF13439 Glycosyltransferase Family 4 AM586_01740 PF00534 Glycosyl transferases group 1 AM586_01745 PF13439 Glycosyltransferase Family 4 AM586_01745 PF00534 Glycosyl transferases group 1 AM586_01750 PF13537 Glutamine amidotransferase domain AM586_01750 PF00733 Asparagine synthase AM586_01755 PF00534 Glycosyl transferases group 1 AM586_01755 PF13439 Glycosyltransferase Family 4 AM586_01775 PF01522 Polysaccharide deacetylase AM586_01780 PF01471 Putative peptidoglycan binding domain AM586_01780 PF13401 AAA domain AM586_01790 PF13614 AAA domain AM586_01805 PF02563 Polysaccharide biosynthesis/export protein AM586_01805 PF10531 SLBB domain AM586_01830 PF00158 Sigma-54 interaction domain AM586_01830 PF02954 Bacterial regulatory protein, Fis family AM586_01830 PF13185 GAF domain AM586_01835 PF01565 FAD binding domain AM586_01835 PF02913 FAD linked oxidases, C-terminal domain AM586_01865 PF01642 Methylmalonyl-CoA mutase AM586_01865 PF02310 B12 binding domain AM586_01875 PF03466 LysR substrate binding domain AM586_01875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_01880 PF01966 HD domain AM586_01880 PF11871 Domain of unknown function (DUF3391) AM586_01885 PF08448 PAS fold AM586_01885 PF00990 Diguanylate cyclase, GGDEF domain AM586_01910 PF13629 Pilus formation protein N terminal region AM586_01910 PF04972 BON domain AM586_01910 PF00263 Bacterial type II and III secretion system protein AM586_01925 PF00437 Type II/IV secretion system protein AM586_01945 PF04972 BON domain AM586_01965 PF04386 Stringent starvation protein B AM586_01970 PF02798 Glutathione S-transferase, N-terminal domain AM586_01970 PF00043 Glutathione S-transferase, C-terminal domain AM586_01975 PF02167 Cytochrome C1 family AM586_01980 PF00032 Cytochrome b(C-terminal)/b6/petD AM586_01980 PF00033 Cytochrome b/b6/petB AM586_01985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM586_01985 PF00355 Rieske [2Fe-2S] domain AM586_01990 PF01741 Large-conductance mechanosensitive channel, MscL AM586_01995 PF17820 PDZ domain AM586_01995 PF13180 PDZ domain AM586_02010 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM586_02010 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM586_02020 PF02556 Preprotein translocase subunit SecB AM586_02025 PF00462 Glutaredoxin AM586_02035 PF00300 Histidine phosphatase superfamily (branch 1) AM586_02040 PF01551 Peptidase family M23 AM586_02045 PF13180 PDZ domain AM586_02045 PF03572 Peptidase family S41 AM586_02050 PF00899 ThiF family AM586_02055 PF07963 Prokaryotic N-terminal methylation motif AM586_02055 PF08334 Type II secretion system (T2SS), protein G AM586_02060 PF07963 Prokaryotic N-terminal methylation motif AM586_02060 PF12019 Type II transport protein GspH AM586_02065 PF07963 Prokaryotic N-terminal methylation motif AM586_02065 PF02501 Type II secretion system (T2SS), protein I AM586_02070 PF07963 Prokaryotic N-terminal methylation motif AM586_02070 PF11612 Type II secretion system (T2SS), protein J AM586_02080 PF05134 Type II secretion system (T2SS), protein L AM586_02080 PF12693 GspL periplasmic domain AM586_02095 PF03958 Bacterial type II/III secretion system short domain AM586_02095 PF00263 Bacterial type II and III secretion system protein AM586_02100 PF00437 Type II/IV secretion system protein AM586_02105 PF00482 Type II secretion system (T2SS), protein F AM586_02125 PF00004 ATPase family associated with various cellular activities (AAA) AM586_02125 PF07724 AAA domain (Cdc48 subfamily) AM586_02130 PF00227 Proteasome subunit AM586_02140 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM586_02145 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM586_02145 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM586_02150 PF02899 Phage integrase, N-terminal SAM-like domain AM586_02150 PF00589 Phage integrase family AM586_02160 PF13609 Gram-negative porin AM586_02165 PF13609 Gram-negative porin AM586_02175 PF01678 Diaminopimelate epimerase AM586_02180 PF03279 Bacterial lipid A biosynthesis acyltransferase AM586_02190 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM586_02190 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM586_02190 PF02772 S-adenosylmethionine synthetase, central domain AM586_02195 PF05221 S-adenosyl-L-homocysteine hydrolase AM586_02195 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AM586_02200 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV AM586_02205 PF02219 Methylenetetrahydrofolate reductase AM586_02210 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM586_02215 PF01464 Transglycosylase SLT domain AM586_02215 PF14718 Soluble lytic murein transglycosylase L domain AM586_02225 PF13417 Glutathione S-transferase, N-terminal domain AM586_02225 PF00043 Glutathione S-transferase, C-terminal domain AM586_02230 PF12627 Probable RNA and SrmB- binding site of polymerase A AM586_02230 PF01743 Poly A polymerase head domain AM586_02230 PF01966 HD domain AM586_02240 PF13404 AsnC-type helix-turn-helix domain AM586_02240 PF01037 Lrp/AsnC ligand binding domain AM586_02270 PF07690 Major Facilitator Superfamily AM586_02280 PF07715 TonB-dependent Receptor Plug Domain AM586_02280 PF00593 TonB dependent receptor AM586_02285 PF00857 Isochorismatase family AM586_02290 PF07969 Amidohydrolase family AM586_02305 PF01171 PP-loop family AM586_02325 PF00684 DnaJ central domain AM586_02325 PF00226 DnaJ domain AM586_02325 PF01556 DnaJ C terminal domain AM586_02330 PF00072 Response regulator receiver domain AM586_02340 PF00990 Diguanylate cyclase, GGDEF domain AM586_02340 PF03707 Bacterial signalling protein N terminal repeat AM586_02340 PF00563 EAL domain AM586_02360 PF03144 Elongation factor Tu domain 2 AM586_02360 PF03143 Elongation factor Tu C-terminal domain AM586_02360 PF00009 Elongation factor Tu GTP binding domain AM586_02375 PF02357 Transcription termination factor nusG AM586_02375 PF00467 KOW motif AM586_02380 PF03946 Ribosomal protein L11, N-terminal domain AM586_02380 PF00298 Ribosomal protein L11, RNA binding domain AM586_02385 PF00687 Ribosomal protein L1p/L10e family AM586_02390 PF00466 Ribosomal protein L10 AM586_02400 PF10385 RNA polymerase beta subunit external 1 domain AM586_02400 PF00562 RNA polymerase Rpb2, domain 6 AM586_02400 PF04561 RNA polymerase Rpb2, domain 2 AM586_02400 PF04563 RNA polymerase beta subunit AM586_02400 PF04560 RNA polymerase Rpb2, domain 7 AM586_02400 PF04565 RNA polymerase Rpb2, domain 3 AM586_02405 PF04997 RNA polymerase Rpb1, domain 1 AM586_02405 PF00623 RNA polymerase Rpb1, domain 2 AM586_02405 PF04983 RNA polymerase Rpb1, domain 3 AM586_02405 PF05000 RNA polymerase Rpb1, domain 4 AM586_02405 PF04998 RNA polymerase Rpb1, domain 5 AM586_02410 PF00857 Isochorismatase family AM586_02435 PF00080 Copper/zinc superoxide dismutase (SODC) AM586_02455 PF00072 Response regulator receiver domain AM586_02455 PF00196 Bacterial regulatory proteins, luxR family AM586_02465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_02465 PF05231 MASE1 AM586_02465 PF07730 Histidine kinase AM586_02475 PF07995 Glucose / Sorbosone dehydrogenase AM586_02485 PF10458 Valyl tRNA synthetase tRNA binding arm AM586_02485 PF00133 tRNA synthetases class I (I, L, M and V) AM586_02485 PF08264 Anticodon-binding domain of tRNA AM586_02490 PF13458 Periplasmic binding protein AM586_02495 PF01037 Lrp/AsnC ligand binding domain AM586_02500 PF00266 Aminotransferase class-V AM586_02515 PF00144 Beta-lactamase AM586_02525 PF13180 PDZ domain AM586_02540 PF01523 Putative modulator of DNA gyrase AM586_02560 PF17863 AAA lid domain AM586_02560 PF07726 ATPase family associated with various cellular activities (AAA) AM586_02590 PF03466 LysR substrate binding domain AM586_02590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_02605 PF00989 PAS fold AM586_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_02605 PF00512 His Kinase A (phospho-acceptor) domain AM586_02610 PF02954 Bacterial regulatory protein, Fis family AM586_02610 PF00158 Sigma-54 interaction domain AM586_02610 PF00072 Response regulator receiver domain AM586_02615 PF02687 FtsX-like permease family AM586_02615 PF12704 MacB-like periplasmic core domain AM586_02620 PF02687 FtsX-like permease family AM586_02620 PF12704 MacB-like periplasmic core domain AM586_02625 PF00005 ABC transporter AM586_02640 PF00884 Sulfatase AM586_02645 PF00164 Ribosomal protein S12/S23 AM586_02650 PF00177 Ribosomal protein S7p/S5e AM586_02655 PF03144 Elongation factor Tu domain 2 AM586_02655 PF00009 Elongation factor Tu GTP binding domain AM586_02655 PF03764 Elongation factor G, domain IV AM586_02655 PF14492 Elongation Factor G, domain II AM586_02655 PF00679 Elongation factor G C-terminus AM586_02660 PF03143 Elongation factor Tu C-terminal domain AM586_02660 PF03144 Elongation factor Tu domain 2 AM586_02660 PF00009 Elongation factor Tu GTP binding domain AM586_02665 PF00338 Ribosomal protein S10p/S20e AM586_02675 PF00356 Bacterial regulatory proteins, lacI family AM586_02680 PF00924 Mechanosensitive ion channel AM586_02685 PF05116 Sucrose-6F-phosphate phosphohydrolase AM586_02685 PF00982 Glycosyltransferase family 20 AM586_02695 PF00297 Ribosomal protein L3 AM586_02700 PF00573 Ribosomal protein L4/L1 family AM586_02705 PF00276 Ribosomal protein L23 AM586_02710 PF00181 Ribosomal Proteins L2, RNA binding domain AM586_02710 PF03947 Ribosomal Proteins L2, C-terminal domain AM586_02715 PF00203 Ribosomal protein S19 AM586_02720 PF00237 Ribosomal protein L22p/L17e AM586_02725 PF07650 KH domain AM586_02725 PF00189 Ribosomal protein S3, C-terminal domain AM586_02730 PF00252 Ribosomal protein L16p/L10e AM586_02735 PF00831 Ribosomal L29 protein AM586_02740 PF00366 Ribosomal protein S17 AM586_02745 PF00238 Ribosomal protein L14p/L23e AM586_02750 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM586_02755 PF00281 Ribosomal protein L5 AM586_02755 PF00673 ribosomal L5P family C-terminus AM586_02760 PF00253 Ribosomal protein S14p/S29e AM586_02765 PF00410 Ribosomal protein S8 AM586_02770 PF00347 Ribosomal protein L6 AM586_02775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM586_02780 PF03719 Ribosomal protein S5, C-terminal domain AM586_02780 PF00333 Ribosomal protein S5, N-terminal domain AM586_02785 PF00327 Ribosomal protein L30p/L7e AM586_02790 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM586_02795 PF00344 SecY translocase AM586_02800 PF01176 Translation initiation factor 1A / IF-1 AM586_02805 PF00416 Ribosomal protein S13/S18 AM586_02810 PF00411 Ribosomal protein S11 AM586_02815 PF01479 S4 domain AM586_02815 PF00163 Ribosomal protein S4/S9 N-terminal domain AM586_02820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM586_02820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM586_02820 PF01000 RNA polymerase Rpb3/RpoA insert domain AM586_02825 PF01196 Ribosomal protein L17 AM586_02830 PF11412 Disulphide bond corrector protein DsbC AM586_02830 PF02683 Cytochrome C biogenesis protein transmembrane region AM586_02840 PF00072 Response regulator receiver domain AM586_02840 PF00486 Transcriptional regulatory protein, C terminal AM586_02845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_02845 PF00512 His Kinase A (phospho-acceptor) domain AM586_02845 PF00672 HAMP domain AM586_02850 PF13533 Biotin-lipoyl like AM586_02855 PF00873 AcrB/AcrD/AcrF family AM586_02865 PF00490 Delta-aminolevulinic acid dehydratase AM586_02870 PF01926 50S ribosome-binding GTPase AM586_02875 PF00034 Cytochrome c AM586_02885 PF01578 Cytochrome C assembly protein AM586_02890 PF00174 Oxidoreductase molybdopterin binding domain AM586_02895 PF01794 Ferric reductase like transmembrane component AM586_02910 PF01810 LysE type translocator AM586_02925 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM586_02925 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM586_02930 PF01491 Frataxin-like domain AM586_02935 PF01627 Hpt domain AM586_02935 PF00512 His Kinase A (phospho-acceptor) domain AM586_02935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_02935 PF00072 Response regulator receiver domain AM586_02935 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_02940 PF06745 KaiC AM586_02945 PF00905 Penicillin binding protein transpeptidase domain AM586_02945 PF17092 Penicillin-binding protein OB-like domain AM586_02945 PF00912 Transglycosylase AM586_02970 PF00263 Bacterial type II and III secretion system protein AM586_02970 PF07660 Secretin and TonB N terminus short domain AM586_02970 PF11741 AMIN domain AM586_02970 PF03958 Bacterial type II/III secretion system short domain AM586_02980 PF01761 3-dehydroquinate synthase AM586_02985 PF01966 HD domain AM586_02985 PF13286 Phosphohydrolase-associated domain AM586_02990 PF00633 Helix-hairpin-helix motif AM586_02990 PF14815 NUDIX domain AM586_02990 PF10576 Iron-sulfur binding domain of endonuclease III AM586_02990 PF00730 HhH-GPD superfamily base excision DNA repair protein AM586_03000 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM586_03000 PF06827 Zinc finger found in FPG and IleRS AM586_03000 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM586_03010 PF03550 Outer membrane lipoprotein LolB AM586_03015 PF08544 GHMP kinases C terminal AM586_03015 PF00288 GHMP kinases N terminal domain AM586_03025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM586_03025 PF14572 Phosphoribosyl synthetase-associated domain AM586_03030 PF14693 Ribosomal protein TL5, C-terminal domain AM586_03030 PF01386 Ribosomal L25p family AM586_03035 PF01195 Peptidyl-tRNA hydrolase AM586_03040 PF00072 Response regulator receiver domain AM586_03060 PF01926 50S ribosome-binding GTPase AM586_03060 PF06071 Protein of unknown function (DUF933) AM586_03065 PF03466 LysR substrate binding domain AM586_03065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_03070 PF07690 Major Facilitator Superfamily AM586_03090 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_03095 PF01494 FAD binding domain AM586_03100 PF13609 Gram-negative porin AM586_03105 PF10509 Galactokinase galactose-binding signature AM586_03105 PF08544 GHMP kinases C terminal AM586_03105 PF00288 GHMP kinases N terminal domain AM586_03110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM586_03110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM586_03115 PF00474 Sodium:solute symporter family AM586_03130 PF00593 TonB dependent receptor AM586_03130 PF07715 TonB-dependent Receptor Plug Domain AM586_03140 PF00232 Glycosyl hydrolase family 1 AM586_03155 PF03466 LysR substrate binding domain AM586_03155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_03160 PF16355 Domain of unknown function (DUF4982) AM586_03160 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 AM586_03160 PF00703 Glycosyl hydrolases family 2 AM586_03160 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM586_03160 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM586_03175 PF02653 Branched-chain amino acid transport system / permease component AM586_03180 PF02653 Branched-chain amino acid transport system / permease component AM586_03185 PF00005 ABC transporter AM586_03190 PF13407 Periplasmic binding protein domain AM586_03195 PF00455 DeoR C terminal sensor domain AM586_03195 PF08220 DeoR-like helix-turn-helix domain AM586_03200 PF00596 Class II Aldolase and Adducin N-terminal domain AM586_03205 PF01261 Xylose isomerase-like TIM barrel AM586_03210 PF00296 Luciferase-like monooxygenase AM586_03215 PF14310 Fibronectin type III-like domain AM586_03215 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM586_03215 PF07691 PA14 domain AM586_03215 PF00933 Glycosyl hydrolase family 3 N terminal domain AM586_03230 PF07690 Major Facilitator Superfamily AM586_03260 PF00593 TonB dependent receptor AM586_03260 PF07715 TonB-dependent Receptor Plug Domain AM586_03265 PF00232 Glycosyl hydrolase family 1 AM586_03270 PF04616 Glycosyl hydrolases family 43 AM586_03270 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain AM586_03275 PF00355 Rieske [2Fe-2S] domain AM586_03290 PF01494 FAD binding domain AM586_03295 PF07690 Major Facilitator Superfamily AM586_03305 PF01156 Inosine-uridine preferring nucleoside hydrolase AM586_03310 PF07690 Major Facilitator Superfamily AM586_03315 PF00933 Glycosyl hydrolase family 3 N terminal domain AM586_03320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_03320 PF03466 LysR substrate binding domain AM586_03325 PF00356 Bacterial regulatory proteins, lacI family AM586_03355 PF05199 GMC oxidoreductase AM586_03355 PF00732 GMC oxidoreductase AM586_03360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM586_03360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_03380 PF01494 FAD binding domain AM586_03385 PF04199 Putative cyclase AM586_03405 PF00698 Acyl transferase domain AM586_03410 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM586_03425 PF01039 Carboxyl transferase domain AM586_03430 PF06857 Malonate decarboxylase delta subunit (MdcD) AM586_03435 PF16957 Malonate decarboxylase, alpha subunit, transporter AM586_03440 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM586_03450 PF03480 Bacterial extracellular solute-binding protein, family 7 AM586_03455 PF00392 Bacterial regulatory proteins, gntR family AM586_03455 PF07729 FCD domain AM586_03470 PF02581 Thiamine monophosphate synthase AM586_03475 PF02581 Thiamine monophosphate synthase AM586_03475 PF03070 TENA/THI-4/PQQC family AM586_03475 PF08543 Phosphomethylpyrimidine kinase AM586_03480 PF05690 Thiazole biosynthesis protein ThiG AM586_03490 PF13667 ThiC-associated domain AM586_03490 PF01964 Radical SAM ThiC family AM586_03505 PF00990 Diguanylate cyclase, GGDEF domain AM586_03505 PF00072 Response regulator receiver domain AM586_03510 PF00999 Sodium/hydrogen exchanger family AM586_03510 PF02254 TrkA-N domain AM586_03510 PF02080 TrkA-C domain AM586_03515 PF01380 SIS domain AM586_03515 PF00571 CBS domain AM586_03535 PF00005 ABC transporter AM586_03540 PF04552 Sigma-54, DNA binding domain AM586_03540 PF04963 Sigma-54 factor, core binding domain AM586_03540 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM586_03545 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM586_03550 PF00378 Enoyl-CoA hydratase/isomerase AM586_03555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_03555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_03565 PF03668 P-loop ATPase protein family AM586_03570 PF07475 HPr Serine kinase C-terminal domain AM586_03570 PF02603 HPr Serine kinase N terminus AM586_03575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM586_03580 PF14489 QueF-like protein AM586_03580 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM586_03585 PF00291 Pyridoxal-phosphate dependent enzyme AM586_03585 PF00585 C-terminal regulatory domain of Threonine dehydratase AM586_03590 PF09335 SNARE associated Golgi protein AM586_03595 PF13411 MerR HTH family regulatory protein AM586_03600 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_03600 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_03605 PF02754 Cysteine-rich domain AM586_03605 PF13183 4Fe-4S dicluster domain AM586_03625 PF00313 'Cold-shock' DNA-binding domain AM586_03630 PF01209 ubiE/COQ5 methyltransferase family AM586_03645 PF03109 ABC1 family AM586_03670 PF00152 tRNA synthetases class II (D, K and N) AM586_03670 PF01336 OB-fold nucleic acid binding domain AM586_03670 PF02938 GAD domain AM586_03675 PF00293 NUDIX domain AM586_03680 PF00990 Diguanylate cyclase, GGDEF domain AM586_03685 PF03372 Endonuclease/Exonuclease/phosphatase family AM586_03695 PF01479 S4 domain AM586_03705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_03705 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_03705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_03705 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM586_03710 PF00378 Enoyl-CoA hydratase/isomerase AM586_03710 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_03710 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_03715 PF02803 Thiolase, C-terminal domain AM586_03715 PF00108 Thiolase, N-terminal domain AM586_03720 PF00378 Enoyl-CoA hydratase/isomerase AM586_03730 PF03466 LysR substrate binding domain AM586_03730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_03735 PF02515 CoA-transferase family III AM586_03740 PF00682 HMGL-like AM586_03745 PF00593 TonB dependent receptor AM586_03745 PF07715 TonB-dependent Receptor Plug Domain AM586_03755 PF00528 Binding-protein-dependent transport system inner membrane component AM586_03760 PF00005 ABC transporter AM586_03760 PF03459 TOBE domain AM586_03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_03765 PF03459 TOBE domain AM586_03780 PF12704 MacB-like periplasmic core domain AM586_03780 PF02687 FtsX-like permease family AM586_03780 PF00005 ABC transporter AM586_03785 PF00005 ABC transporter AM586_03785 PF12704 MacB-like periplasmic core domain AM586_03785 PF02687 FtsX-like permease family AM586_03790 PF13533 Biotin-lipoyl like AM586_03795 PF04185 Phosphoesterase family AM586_03810 PF12697 Alpha/beta hydrolase family AM586_03825 PF00392 Bacterial regulatory proteins, gntR family AM586_03825 PF00155 Aminotransferase class I and II AM586_03830 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM586_03830 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM586_03830 PF00034 Cytochrome c AM586_03840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM586_03840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM586_03860 PF13673 Acetyltransferase (GNAT) domain AM586_03860 PF13302 Acetyltransferase (GNAT) domain AM586_03860 PF03352 Methyladenine glycosylase AM586_03860 PF00117 Glutamine amidotransferase class-I AM586_03860 PF00958 GMP synthase C terminal domain AM586_03865 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM586_03865 PF01266 FAD dependent oxidoreductase AM586_03940 PF06508 Queuosine biosynthesis protein QueC AM586_03965 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_03965 PF00512 His Kinase A (phospho-acceptor) domain AM586_03975 PF11849 Domain of unknown function (DUF3369) AM586_03980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM586_03980 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM586_03990 PF06628 Catalase-related immune-responsive AM586_03990 PF18011 C-terminal domain found in long catalases AM586_03990 PF00199 Catalase AM586_04010 PF04542 Sigma-70 region 2 AM586_04010 PF08281 Sigma-70, region 4 AM586_04020 PF07687 Peptidase dimerisation domain AM586_04020 PF01546 Peptidase family M20/M25/M40 AM586_04035 PF05951 Bacterial protein of unknown function (DUF882) AM586_04045 PF05193 Peptidase M16 inactive domain AM586_04045 PF00675 Insulinase (Peptidase family M16) AM586_04060 PF00857 Isochorismatase family AM586_04070 PF00296 Luciferase-like monooxygenase AM586_04075 PF00144 Beta-lactamase AM586_04085 PF00561 alpha/beta hydrolase fold AM586_04090 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM586_04090 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM586_04095 PF01062 Bestrophin, RFP-TM, chloride channel AM586_04100 PF03851 UV-endonuclease UvdE AM586_04115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_04115 PF02203 Tar ligand binding domain homologue AM586_04115 PF00672 HAMP domain AM586_04120 PF11146 Protein of unknown function (DUF2905) AM586_04135 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM586_04140 PF08212 Lipocalin-like domain AM586_04165 PF04820 Tryptophan halogenase AM586_04175 PF00356 Bacterial regulatory proteins, lacI family AM586_04185 PF00294 pfkB family carbohydrate kinase AM586_04190 PF17678 Glycosyl hydrolase family 92 N-terminal domain AM586_04190 PF07971 Glycosyl hydrolase family 92 AM586_04195 PF07690 Major Facilitator Superfamily AM586_04200 PF17137 Domain of unknown function (DUF5110) AM586_04200 PF13802 Galactose mutarotase-like AM586_04200 PF01055 Glycosyl hydrolases family 31 AM586_04200 PF16338 Domain of unknown function (DUF4968) AM586_04210 PF03390 2-hydroxycarboxylate transporter family AM586_04220 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM586_04240 PF06772 Bacterial low temperature requirement A protein (LtrA) AM586_04245 PF00578 AhpC/TSA family AM586_04250 PF13462 Thioredoxin AM586_04250 PF06965 Na+/H+ antiporter 1 AM586_04255 PF00296 Luciferase-like monooxygenase AM586_04265 PF03061 Thioesterase superfamily AM586_04270 PF07969 Amidohydrolase family AM586_04275 PF00561 alpha/beta hydrolase fold AM586_04290 PF00199 Catalase AM586_04290 PF06628 Catalase-related immune-responsive AM586_04300 PF02566 OsmC-like protein AM586_04310 PF01431 Peptidase family M13 AM586_04310 PF05649 Peptidase family M13 AM586_04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_04320 PF03466 LysR substrate binding domain AM586_04330 PF13458 Periplasmic binding protein AM586_04335 PF02028 BCCT, betaine/carnitine/choline family transporter AM586_04350 PF00005 ABC transporter AM586_04350 PF00571 CBS domain AM586_04355 PF00528 Binding-protein-dependent transport system inner membrane component AM586_04360 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM586_04365 PF03831 PhnA domain AM586_04365 PF08274 PhnA Zinc-Ribbon AM586_04375 PF01494 FAD binding domain AM586_04380 PF13098 Thioredoxin-like domain AM586_04380 PF10411 Disulfide bond isomerase protein N-terminus AM586_04385 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_04385 PF01799 [2Fe-2S] binding domain AM586_04390 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_04410 PF00218 Indole-3-glycerol phosphate synthase AM586_04415 PF01810 LysE type translocator AM586_04420 PF00591 Glycosyl transferase family, a/b domain AM586_04420 PF02885 Glycosyl transferase family, helical bundle domain AM586_04425 PF00117 Glutamine amidotransferase class-I AM586_04430 PF00425 chorismate binding enzyme AM586_04430 PF04715 Anthranilate synthase component I, N terminal region AM586_04435 PF13419 Haloacid dehalogenase-like hydrolase AM586_04440 PF00834 Ribulose-phosphate 3 epimerase family AM586_04445 PF04379 ApaG domain AM586_04460 PF00378 Enoyl-CoA hydratase/isomerase AM586_04490 PF04389 Peptidase family M28 AM586_04490 PF04151 Bacterial pre-peptidase C-terminal domain AM586_04500 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM586_04500 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM586_04505 PF01497 Periplasmic binding protein AM586_04510 PF00155 Aminotransferase class I and II AM586_04515 PF03186 CobD/Cbib protein AM586_04515 PF17113 Regulatory signalling modulator protein AmpE AM586_04520 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM586_04525 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM586_04525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM586_04530 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM586_04530 PF12557 Cob(I)alamin adenosyltransferase N terminal AM586_04535 PF00005 ABC transporter AM586_04540 PF01032 FecCD transport family AM586_04545 PF07715 TonB-dependent Receptor Plug Domain AM586_04545 PF00593 TonB dependent receptor AM586_04555 PF02654 Cobalamin-5-phosphate synthase AM586_04560 PF02277 Phosphoribosyltransferase AM586_04590 PF00593 TonB dependent receptor AM586_04590 PF07715 TonB-dependent Receptor Plug Domain AM586_04635 PF07715 TonB-dependent Receptor Plug Domain AM586_04635 PF00593 TonB dependent receptor AM586_04640 PF00171 Aldehyde dehydrogenase family AM586_04650 PF01590 GAF domain AM586_04650 PF02954 Bacterial regulatory protein, Fis family AM586_04650 PF00158 Sigma-54 interaction domain AM586_04680 PF03707 Bacterial signalling protein N terminal repeat AM586_04680 PF00990 Diguanylate cyclase, GGDEF domain AM586_04680 PF00563 EAL domain AM586_04695 PF00005 ABC transporter AM586_04705 PF01078 Magnesium chelatase, subunit ChlI AM586_04705 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM586_04715 PF04380 Membrane fusogenic activity AM586_04725 PF00543 Nitrogen regulatory protein P-II AM586_04730 PF00909 Ammonium Transporter Family AM586_04745 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM586_04745 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM586_04755 PF00381 PTS HPr component phosphorylation site AM586_04760 PF02896 PEP-utilising enzyme, TIM barrel domain AM586_04760 PF00391 PEP-utilising enzyme, mobile domain AM586_04760 PF05524 PEP-utilising enzyme, N-terminal AM586_04765 PF00561 alpha/beta hydrolase fold AM586_04770 PF07021 Methionine biosynthesis protein MetW AM586_04770 PF00561 alpha/beta hydrolase fold AM586_04775 PF01435 Peptidase family M48 AM586_04780 PF01479 S4 domain AM586_04780 PF00849 RNA pseudouridylate synthase AM586_04785 PF03372 Endonuclease/Exonuclease/phosphatase family AM586_04790 PF00156 Phosphoribosyl transferase domain AM586_04795 PF02637 GatB domain AM586_04795 PF02934 GatB/GatE catalytic domain AM586_04800 PF01425 Amidase AM586_04805 PF02686 Glu-tRNAGln amidotransferase C subunit AM586_04815 PF04085 rod shape-determining protein MreC AM586_04825 PF00905 Penicillin binding protein transpeptidase domain AM586_04825 PF03717 Penicillin-binding Protein dimerisation domain AM586_04830 PF01098 Cell cycle protein AM586_04835 PF05036 Sporulation related domain AM586_04835 PF03330 Lytic transglycolase AM586_04845 PF03309 Type III pantothenate kinase AM586_04850 PF02237 Biotin protein ligase C terminal domain AM586_04850 PF03099 Biotin/lipoate A/B protein ligase family AM586_04855 PF00106 short chain dehydrogenase AM586_04865 PF03485 Arginyl tRNA synthetase N terminal domain AM586_04865 PF05746 DALR anticodon binding domain AM586_04865 PF00750 tRNA synthetases class I (R) AM586_04870 PF01029 NusB family AM586_04870 PF01189 16S rRNA methyltransferase RsmB/F AM586_04880 PF00989 PAS fold AM586_04880 PF00512 His Kinase A (phospho-acceptor) domain AM586_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_04880 PF00672 HAMP domain AM586_04885 PF00072 Response regulator receiver domain AM586_04885 PF00158 Sigma-54 interaction domain AM586_04885 PF02954 Bacterial regulatory protein, Fis family AM586_04895 PF12091 Protein of unknown function (DUF3567) AM586_04900 PF13230 Glutamine amidotransferases class-II AM586_04905 PF08668 HDOD domain AM586_04905 PF00563 EAL domain AM586_04910 PF00005 ABC transporter AM586_04920 PF00665 Integrase core domain AM586_04920 PF13333 Integrase core domain AM586_04920 PF13276 HTH-like domain AM586_04930 PF02574 Homocysteine S-methyltransferase AM586_04930 PF02310 B12 binding domain AM586_04930 PF02607 B12 binding domain AM586_04930 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM586_04930 PF00809 Pterin binding enzyme AM586_04940 PF00551 Formyl transferase AM586_04940 PF02911 Formyl transferase, C-terminal domain AM586_04945 PF01327 Polypeptide deformylase AM586_04955 PF02481 DNA recombination-mediator protein A AM586_04955 PF17782 DprA winged helix domain AM586_04960 PF04361 Protein of unknown function (DUF494) AM586_04965 PF01131 DNA topoisomerase AM586_04965 PF01751 Toprim domain AM586_04970 PF02203 Tar ligand binding domain homologue AM586_04970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_04970 PF00672 HAMP domain AM586_04985 PF00005 ABC transporter AM586_04995 PF03232 Ubiquinone biosynthesis protein COQ7 AM586_05000 PF02566 OsmC-like protein AM586_05010 PF00005 ABC transporter AM586_05020 PF00572 Ribosomal protein L13 AM586_05025 PF00380 Ribosomal protein S9/S16 AM586_05030 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM586_05030 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM586_05040 PF01521 Iron-sulphur cluster biosynthesis AM586_05045 PF00881 Nitroreductase family AM586_05050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_05050 PF03466 LysR substrate binding domain AM586_05055 PF03702 Anhydro-N-acetylmuramic acid kinase AM586_05060 PF01551 Peptidase family M23 AM586_05060 PF01476 LysM domain AM586_05070 PF02580 D-Tyr-tRNA(Tyr) deacylase AM586_05075 PF01161 Phosphatidylethanolamine-binding protein AM586_05080 PF00300 Histidine phosphatase superfamily (branch 1) AM586_05085 PF01207 Dihydrouridine synthase (Dus) AM586_05090 PF02954 Bacterial regulatory protein, Fis family AM586_05095 PF01808 AICARFT/IMPCHase bienzyme AM586_05095 PF02142 MGS-like domain AM586_05100 PF02075 Crossover junction endodeoxyribonuclease RuvC AM586_05105 PF01330 RuvA N terminal domain AM586_05105 PF07499 RuvA, C-terminal domain AM586_05110 PF05491 RuvB C-terminal winged helix domain AM586_05110 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM586_05110 PF17864 RuvB AAA lid domain AM586_05115 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM586_05125 PF00563 EAL domain AM586_05125 PF00990 Diguanylate cyclase, GGDEF domain AM586_05125 PF03707 Bacterial signalling protein N terminal repeat AM586_05135 PF01979 Amidohydrolase family AM586_05140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_05140 PF07730 Histidine kinase AM586_05145 PF00072 Response regulator receiver domain AM586_05145 PF00196 Bacterial regulatory proteins, luxR family AM586_05155 PF08264 Anticodon-binding domain of tRNA AM586_05155 PF10458 Valyl tRNA synthetase tRNA binding arm AM586_05155 PF00133 tRNA synthetases class I (I, L, M and V) AM586_05165 PF00072 Response regulator receiver domain AM586_05165 PF00486 Transcriptional regulatory protein, C terminal AM586_05170 PF01965 DJ-1/PfpI family AM586_05175 PF08240 Alcohol dehydrogenase GroES-like domain AM586_05175 PF00107 Zinc-binding dehydrogenase AM586_05185 PF01431 Peptidase family M13 AM586_05185 PF05649 Peptidase family M13 AM586_05195 PF03364 Polyketide cyclase / dehydrase and lipid transport AM586_05200 PF13361 UvrD-like helicase C-terminal domain AM586_05200 PF00580 UvrD/REP helicase N-terminal domain AM586_05210 PF01636 Phosphotransferase enzyme family AM586_05220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM586_05220 PF01612 3'-5' exonuclease AM586_05220 PF00476 DNA polymerase family A AM586_05220 PF01367 5'-3' exonuclease, C-terminal SAM fold AM586_05235 PF01738 Dienelactone hydrolase family AM586_05245 PF00581 Rhodanese-like domain AM586_05260 PF02609 Exonuclease VII small subunit AM586_05265 PF00348 Polyprenyl synthetase AM586_05270 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM586_05270 PF02779 Transketolase, pyrimidine binding domain AM586_05270 PF02780 Transketolase, C-terminal domain AM586_05280 PF07702 UTRA domain AM586_05280 PF00392 Bacterial regulatory proteins, gntR family AM586_05285 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_05290 PF03401 Tripartite tricarboxylate transporter family receptor AM586_05300 PF01970 Tripartite tricarboxylate transporter TctA family AM586_05320 PF01923 Cobalamin adenosyltransferase AM586_05325 PF02913 FAD linked oxidases, C-terminal domain AM586_05325 PF01565 FAD binding domain AM586_05330 PF01565 FAD binding domain AM586_05335 PF13183 4Fe-4S dicluster domain AM586_05335 PF02754 Cysteine-rich domain AM586_05355 PF10566 Glycoside hydrolase 97 AM586_05355 PF14508 Glycosyl-hydrolase 97 N-terminal AM586_05355 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation AM586_05365 PF00255 Glutathione peroxidase AM586_05370 PF13183 4Fe-4S dicluster domain AM586_05370 PF02754 Cysteine-rich domain AM586_05375 PF01565 FAD binding domain AM586_05380 PF01565 FAD binding domain AM586_05380 PF02913 FAD linked oxidases, C-terminal domain AM586_05385 PF02652 L-lactate permease AM586_05390 PF07729 FCD domain AM586_05390 PF00392 Bacterial regulatory proteins, gntR family AM586_05395 PF00437 Type II/IV secretion system protein AM586_05400 PF00437 Type II/IV secretion system protein AM586_05405 PF01168 Alanine racemase, N-terminal domain AM586_05410 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM586_05410 PF03807 NADP oxidoreductase coenzyme F420-dependent AM586_05430 PF05957 Bacterial protein of unknown function (DUF883) AM586_05435 PF01040 UbiA prenyltransferase family AM586_05445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_05445 PF03466 LysR substrate binding domain AM586_05450 PF00437 Type II/IV secretion system protein AM586_05455 PF01467 Cytidylyltransferase-like AM586_05465 PF00588 SpoU rRNA Methylase family AM586_05475 PF00156 Phosphoribosyl transferase domain AM586_05480 PF08241 Methyltransferase domain AM586_05485 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM586_05485 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AM586_05490 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_05495 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 AM586_05505 PF00510 Cytochrome c oxidase subunit III AM586_05525 PF02628 Cytochrome oxidase assembly protein AM586_05530 PF01040 UbiA prenyltransferase family AM586_05535 PF02630 SCO1/SenC AM586_05540 PF01594 AI-2E family transporter AM586_05550 PF00571 CBS domain AM586_05550 PF01595 Cyclin M transmembrane N-terminal domain AM586_05550 PF03471 Transporter associated domain AM586_05555 PF03466 LysR substrate binding domain AM586_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_05565 PF02342 TerD domain AM586_05575 PF02342 TerD domain AM586_05590 PF08678 Rsbr N terminal AM586_05590 PF01740 STAS domain AM586_05595 PF00990 Diguanylate cyclase, GGDEF domain AM586_05595 PF00072 Response regulator receiver domain AM586_05615 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AM586_05645 PF03601 Conserved hypothetical protein 698 AM586_05650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_05650 PF03466 LysR substrate binding domain AM586_05655 PF02308 MgtC family AM586_05660 PF01738 Dienelactone hydrolase family AM586_05665 PF04542 Sigma-70 region 2 AM586_05665 PF04545 Sigma-70, region 4 AM586_05665 PF00140 Sigma-70 factor, region 1.2 AM586_05670 PF18075 FtsX extracellular domain AM586_05675 PF00005 ABC transporter AM586_05680 PF02881 SRP54-type protein, helical bundle domain AM586_05680 PF00448 SRP54-type protein, GTPase domain AM586_05690 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM586_05690 PF00205 Thiamine pyrophosphate enzyme, central domain AM586_05690 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM586_05695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM586_05695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM586_05710 PF00356 Bacterial regulatory proteins, lacI family AM586_05715 PF07690 Major Facilitator Superfamily AM586_05720 PF13378 Enolase C-terminal domain-like AM586_05720 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM586_05725 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM586_05725 PF00004 ATPase family associated with various cellular activities (AAA) AM586_05725 PF05362 Lon protease (S16) C-terminal proteolytic domain AM586_05730 PF02381 MraZ protein, putative antitoxin-like AM586_05735 PF01795 MraW methylase family AM586_05740 PF04999 Cell division protein FtsL AM586_05745 PF00905 Penicillin binding protein transpeptidase domain AM586_05745 PF03717 Penicillin-binding Protein dimerisation domain AM586_05750 PF02875 Mur ligase family, glutamate ligase domain AM586_05750 PF08245 Mur ligase middle domain AM586_05750 PF01225 Mur ligase family, catalytic domain AM586_05755 PF02875 Mur ligase family, glutamate ligase domain AM586_05755 PF01225 Mur ligase family, catalytic domain AM586_05755 PF08245 Mur ligase middle domain AM586_05760 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM586_05760 PF00953 Glycosyl transferase family 4 AM586_05765 PF02875 Mur ligase family, glutamate ligase domain AM586_05765 PF08245 Mur ligase middle domain AM586_05770 PF01098 Cell cycle protein AM586_05775 PF03033 Glycosyltransferase family 28 N-terminal domain AM586_05775 PF04101 Glycosyltransferase family 28 C-terminal domain AM586_05780 PF01225 Mur ligase family, catalytic domain AM586_05780 PF02875 Mur ligase family, glutamate ligase domain AM586_05780 PF08245 Mur ligase middle domain AM586_05785 PF01820 D-ala D-ala ligase N-terminus AM586_05785 PF07478 D-ala D-ala ligase C-terminus AM586_05790 PF08478 POTRA domain, FtsQ-type AM586_05790 PF03799 Cell division protein FtsQ AM586_05795 PF02491 SHS2 domain inserted in FTSA AM586_05800 PF00091 Tubulin/FtsZ family, GTPase domain AM586_05800 PF12327 FtsZ family, C-terminal domain AM586_05805 PF00462 Glutaredoxin AM586_05805 PF08534 Redoxin AM586_05810 PF00583 Acetyltransferase (GNAT) family AM586_05820 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM586_05830 PF07516 SecA Wing and Scaffold domain AM586_05830 PF07517 SecA DEAD-like domain AM586_05830 PF02810 SEC-C motif AM586_05830 PF01043 SecA preprotein cross-linking domain AM586_05835 PF13276 HTH-like domain AM586_05835 PF00665 Integrase core domain AM586_05835 PF13333 Integrase core domain AM586_05845 PF07739 TipAS antibiotic-recognition domain AM586_05845 PF13411 MerR HTH family regulatory protein AM586_05855 PF01594 AI-2E family transporter AM586_05860 PF01960 ArgJ family AM586_05875 PF00248 Aldo/keto reductase family AM586_05885 PF03884 DNA gyrase inhibitor YacG AM586_05890 PF07072 Cell division protein AM586_05895 PF01121 Dephospho-CoA kinase AM586_05900 PF06750 Bacterial Peptidase A24 N-terminal domain AM586_05900 PF01478 Type IV leader peptidase family AM586_05915 PF03466 LysR substrate binding domain AM586_05915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_05920 PF00482 Type II secretion system (T2SS), protein F AM586_05925 PF00437 Type II/IV secretion system protein AM586_05925 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM586_05930 PF01595 Cyclin M transmembrane N-terminal domain AM586_05930 PF03471 Transporter associated domain AM586_05930 PF00571 CBS domain AM586_05940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_05940 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_05940 PF01799 [2Fe-2S] binding domain AM586_05940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_05945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_05945 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_05955 PF01979 Amidohydrolase family AM586_05960 PF00962 Adenosine/AMP deaminase AM586_05965 PF07715 TonB-dependent Receptor Plug Domain AM586_05965 PF00593 TonB dependent receptor AM586_05970 PF02872 5'-nucleotidase, C-terminal domain AM586_05970 PF00746 LPXTG cell wall anchor motif AM586_05970 PF00149 Calcineurin-like phosphoesterase AM586_05970 PF00565 Staphylococcal nuclease homologue AM586_06035 PF01470 Pyroglutamyl peptidase AM586_06050 PF00578 AhpC/TSA family AM586_06050 PF02683 Cytochrome C biogenesis protein transmembrane region AM586_06050 PF17991 Thioredoxin like C-terminal domain AM586_06055 PF00561 alpha/beta hydrolase fold AM586_06060 PF01047 MarR family AM586_06065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_06065 PF03466 LysR substrate binding domain AM586_06075 PF00294 pfkB family carbohydrate kinase AM586_06080 PF01048 Phosphorylase superfamily AM586_06085 PF01676 Metalloenzyme superfamily AM586_06090 PF01791 DeoC/LacD family aldolase AM586_06095 PF00171 Aldehyde dehydrogenase family AM586_06100 PF02885 Glycosyl transferase family, helical bundle domain AM586_06100 PF00591 Glycosyl transferase family, a/b domain AM586_06100 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM586_06105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM586_06125 PF04397 LytTr DNA-binding domain AM586_06125 PF00072 Response regulator receiver domain AM586_06130 PF07694 5TMR of 5TMR-LYT AM586_06130 PF06580 Histidine kinase AM586_06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_06155 PF00043 Glutathione S-transferase, C-terminal domain AM586_06155 PF02798 Glutathione S-transferase, N-terminal domain AM586_06170 PF13302 Acetyltransferase (GNAT) domain AM586_06175 PF08362 YcdC-like protein, C-terminal region AM586_06175 PF00440 Bacterial regulatory proteins, tetR family AM586_06180 PF00392 Bacterial regulatory proteins, gntR family AM586_06180 PF00155 Aminotransferase class I and II AM586_06185 PF00202 Aminotransferase class-III AM586_06190 PF00171 Aldehyde dehydrogenase family AM586_06195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_06195 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM586_06200 PF01180 Dihydroorotate dehydrogenase AM586_06205 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM586_06210 PF01979 Amidohydrolase family AM586_06215 PF07687 Peptidase dimerisation domain AM586_06215 PF01546 Peptidase family M20/M25/M40 AM586_06235 PF00082 Subtilase family AM586_06245 PF04542 Sigma-70 region 2 AM586_06245 PF08281 Sigma-70, region 4 AM586_06250 PF01566 Natural resistance-associated macrophage protein AM586_06255 PF00909 Ammonium Transporter Family AM586_06260 PF03466 LysR substrate binding domain AM586_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_06280 PF00326 Prolyl oligopeptidase family AM586_06280 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM586_06290 PF00072 Response regulator receiver domain AM586_06290 PF03861 ANTAR domain AM586_06295 PF00005 ABC transporter AM586_06305 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM586_06305 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_06305 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM586_06305 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM586_06305 PF04324 BFD-like [2Fe-2S] binding domain AM586_06315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM586_06315 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_06315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM586_06315 PF04324 BFD-like [2Fe-2S] binding domain AM586_06315 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM586_06320 PF04324 BFD-like [2Fe-2S] binding domain AM586_06320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM586_06320 PF00384 Molybdopterin oxidoreductase AM586_06320 PF01568 Molydopterin dinucleotide binding domain AM586_06330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_06330 PF03466 LysR substrate binding domain AM586_06335 PF07690 Major Facilitator Superfamily AM586_06340 PF02798 Glutathione S-transferase, N-terminal domain AM586_06340 PF00043 Glutathione S-transferase, C-terminal domain AM586_06350 PF13847 Methyltransferase domain AM586_06360 PF03741 Integral membrane protein TerC family AM586_06380 PF00348 Polyprenyl synthetase AM586_06385 PF00829 Ribosomal prokaryotic L21 protein AM586_06390 PF01016 Ribosomal L27 protein AM586_06395 PF01926 50S ribosome-binding GTPase AM586_06395 PF01018 GTP1/OBG AM586_06405 PF01472 PUA domain AM586_06405 PF00696 Amino acid kinase family AM586_06420 PF01618 MotA/TolQ/ExbB proton channel family AM586_06445 PF00633 Helix-hairpin-helix motif AM586_06445 PF00730 HhH-GPD superfamily base excision DNA repair protein AM586_06445 PF10576 Iron-sulfur binding domain of endonuclease III AM586_06450 PF04060 Putative Fe-S cluster AM586_06475 PF00037 4Fe-4S binding domain AM586_06475 PF11953 Domain of unknown function (DUF3470) AM586_06495 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_06520 PF02464 Competence-damaged protein AM586_06520 PF18146 Damage-inducible protein CinA KH domain AM586_06520 PF00994 Probable molybdopterin binding domain AM586_06535 PF00581 Rhodanese-like domain AM586_06550 PF00512 His Kinase A (phospho-acceptor) domain AM586_06550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_06550 PF00989 PAS fold AM586_06555 PF02954 Bacterial regulatory protein, Fis family AM586_06555 PF00072 Response regulator receiver domain AM586_06555 PF00158 Sigma-54 interaction domain AM586_06560 PF01544 CorA-like Mg2+ transporter protein AM586_06565 PF00593 TonB dependent receptor AM586_06565 PF07715 TonB-dependent Receptor Plug Domain AM586_06570 PF03069 Acetamidase/Formamidase family AM586_06575 PF00892 EamA-like transporter family AM586_06585 PF00593 TonB dependent receptor AM586_06590 PF00593 TonB dependent receptor AM586_06595 PF04452 RNA methyltransferase AM586_06600 PF00456 Transketolase, thiamine diphosphate binding domain AM586_06600 PF02779 Transketolase, pyrimidine binding domain AM586_06600 PF02780 Transketolase, C-terminal domain AM586_06605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM586_06605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM586_06610 PF00557 Metallopeptidase family M24 AM586_06615 PF07715 TonB-dependent Receptor Plug Domain AM586_06615 PF00593 TonB dependent receptor AM586_06620 PF03710 Glutamate-ammonia ligase adenylyltransferase AM586_06620 PF08335 GlnD PII-uridylyltransferase AM586_06630 PF00795 Carbon-nitrogen hydrolase AM586_06635 PF01523 Putative modulator of DNA gyrase AM586_06640 PF07715 TonB-dependent Receptor Plug Domain AM586_06640 PF00593 TonB dependent receptor AM586_06645 PF00793 DAHP synthetase I family AM586_06650 PF07715 TonB-dependent Receptor Plug Domain AM586_06650 PF00593 TonB dependent receptor AM586_06660 PF00593 TonB dependent receptor AM586_06660 PF07715 TonB-dependent Receptor Plug Domain AM586_06665 PF00528 Binding-protein-dependent transport system inner membrane component AM586_06670 PF00528 Binding-protein-dependent transport system inner membrane component AM586_06675 PF00005 ABC transporter AM586_06675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM586_06685 PF01380 SIS domain AM586_06685 PF02685 Glucokinase AM586_06685 PF01418 Helix-turn-helix domain, rpiR family AM586_06690 PF04079 Segregation and condensation complex subunit ScpB AM586_06695 PF01479 S4 domain AM586_06695 PF00849 RNA pseudouridylate synthase AM586_06700 PF02576 RimP N-terminal domain AM586_06700 PF17384 RimP C-terminal SH3 domain AM586_06705 PF08529 NusA N-terminal domain AM586_06705 PF13184 NusA-like KH domain AM586_06710 PF04760 Translation initiation factor IF-2, N-terminal region AM586_06710 PF08364 Bacterial translation initiation factor IF-2 associated region AM586_06710 PF11987 Translation-initiation factor 2 AM586_06710 PF00009 Elongation factor Tu GTP binding domain AM586_06715 PF02033 Ribosome-binding factor A AM586_06720 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM586_06720 PF09157 Pseudouridine synthase II TruB, C-terminal AM586_06720 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM586_06750 PF12833 Helix-turn-helix domain AM586_06750 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term AM586_06755 PF12833 Helix-turn-helix domain AM586_06805 PF02119 Flagellar P-ring protein AM586_06810 PF02107 Flagellar L-ring protein AM586_06815 PF00460 Flagella basal body rod protein AM586_06815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_06820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_06820 PF00460 Flagella basal body rod protein AM586_06825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_06825 PF07559 Flagellar basal body protein FlaE AM586_06825 PF00460 Flagella basal body rod protein AM586_06830 PF03963 Flagellar hook capping protein - N-terminal region AM586_06835 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_06835 PF00460 Flagella basal body rod protein AM586_06840 PF00460 Flagella basal body rod protein AM586_06850 PF10135 Rod binding protein AM586_06850 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM586_06865 PF00691 OmpA family AM586_06865 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM586_06870 PF01618 MotA/TolQ/ExbB proton channel family AM586_06875 PF04542 Sigma-70 region 2 AM586_06875 PF04545 Sigma-70, region 4 AM586_06900 PF02465 Flagellar hook-associated protein 2 N-terminus AM586_06900 PF07196 Flagellin hook IN motif AM586_06900 PF07195 Flagellar hook-associated protein 2 C-terminus AM586_06910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM586_06910 PF18269 T3SS EscN ATPase C-terminal domain AM586_06920 PF01706 FliG C-terminal domain AM586_06920 PF14842 FliG N-terminal domain AM586_06920 PF14841 FliG middle domain AM586_06925 PF08345 Flagellar M-ring protein C-terminal AM586_06925 PF01514 Secretory protein of YscJ/FliF family AM586_06930 PF02049 Flagellar hook-basal body complex protein FliE AM586_06940 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM586_06945 PF00813 FliP family AM586_06955 PF01311 Bacterial export proteins, family 1 AM586_06960 PF01312 FlhB HrpN YscU SpaS Family AM586_06965 PF00771 FHIPEP family AM586_06975 PF00669 Bacterial flagellin N-terminal helical region AM586_06975 PF00700 Bacterial flagellin C-terminal helical region AM586_06985 PF01207 Dihydrouridine synthase (Dus) AM586_06990 PF00672 HAMP domain AM586_06990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_06990 PF02203 Tar ligand binding domain homologue AM586_07025 PF01177 Asp/Glu/Hydantoin racemase AM586_07035 PF03350 Uncharacterized protein family, UPF0114 AM586_07040 PF16177 Acetyl-coenzyme A synthetase N-terminus AM586_07040 PF13193 AMP-binding enzyme C-terminal domain AM586_07040 PF00501 AMP-binding enzyme AM586_07065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_07065 PF03466 LysR substrate binding domain AM586_07070 PF07690 Major Facilitator Superfamily AM586_07075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_07075 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_07080 PF03737 Aldolase/RraA AM586_07085 PF13609 Gram-negative porin AM586_07095 PF13411 MerR HTH family regulatory protein AM586_07110 PF12833 Helix-turn-helix domain AM586_07110 PF01965 DJ-1/PfpI family AM586_07115 PF02566 OsmC-like protein AM586_07135 PF03466 LysR substrate binding domain AM586_07135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_07150 PF03707 Bacterial signalling protein N terminal repeat AM586_07150 PF00990 Diguanylate cyclase, GGDEF domain AM586_07150 PF00563 EAL domain AM586_07160 PF03358 NADPH-dependent FMN reductase AM586_07170 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM586_07180 PF07690 Major Facilitator Superfamily AM586_07185 PF03173 Putative carbohydrate binding domain AM586_07185 PF02838 Glycosyl hydrolase family 20, domain 2 AM586_07185 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain AM586_07185 PF00728 Glycosyl hydrolase family 20, catalytic domain AM586_07195 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_07195 PF00072 Response regulator receiver domain AM586_07195 PF00989 PAS fold AM586_07195 PF01627 Hpt domain AM586_07195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_07195 PF00512 His Kinase A (phospho-acceptor) domain AM586_07205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_07205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_07210 PF00941 FAD binding domain in molybdopterin dehydrogenase AM586_07210 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM586_07215 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_07215 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM586_07215 PF01799 [2Fe-2S] binding domain AM586_07230 PF00563 EAL domain AM586_07230 PF01590 GAF domain AM586_07230 PF00990 Diguanylate cyclase, GGDEF domain AM586_07230 PF00360 Phytochrome region AM586_07235 PF01047 MarR family AM586_07245 PF00356 Bacterial regulatory proteins, lacI family AM586_07250 PF03636 Glycosyl hydrolase family 65, N-terminal domain AM586_07250 PF03632 Glycosyl hydrolase family 65 central catalytic domain AM586_07250 PF03633 Glycosyl hydrolase family 65, C-terminal domain AM586_07255 PF13419 Haloacid dehalogenase-like hydrolase AM586_07260 PF07690 Major Facilitator Superfamily AM586_07265 PF00990 Diguanylate cyclase, GGDEF domain AM586_07265 PF03707 Bacterial signalling protein N terminal repeat AM586_07265 PF13188 PAS domain AM586_07265 PF00563 EAL domain AM586_07275 PF01263 Aldose 1-epimerase AM586_07280 PF00672 HAMP domain AM586_07280 PF02203 Tar ligand binding domain homologue AM586_07280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_07285 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_07290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_07290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_07295 PF00529 HlyD membrane-fusion protein of T1SS AM586_07295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_07300 PF02321 Outer membrane efflux protein AM586_07305 PF07690 Major Facilitator Superfamily AM586_07320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_07320 PF03466 LysR substrate binding domain AM586_07325 PF08267 Cobalamin-independent synthase, N-terminal domain AM586_07325 PF01717 Cobalamin-independent synthase, Catalytic domain AM586_07330 PF02634 FdhD/NarQ family AM586_07335 PF00384 Molybdopterin oxidoreductase AM586_07340 PF00392 Bacterial regulatory proteins, gntR family AM586_07340 PF00155 Aminotransferase class I and II AM586_07345 PF01226 Formate/nitrite transporter AM586_07370 PF05726 Pirin C-terminal cupin domain AM586_07370 PF02678 Pirin AM586_07375 PF01546 Peptidase family M20/M25/M40 AM586_07380 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM586_07380 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM586_07390 PF00288 GHMP kinases N terminal domain AM586_07390 PF10509 Galactokinase galactose-binding signature AM586_07390 PF08544 GHMP kinases C terminal AM586_07395 PF00703 Glycosyl hydrolases family 2 AM586_07395 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM586_07395 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM586_07440 PF04011 LemA family AM586_07445 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM586_07450 PF08411 Exonuclease C-terminal AM586_07450 PF00929 Exonuclease AM586_07455 PF00990 Diguanylate cyclase, GGDEF domain AM586_07455 PF00072 Response regulator receiver domain AM586_07485 PF00970 Oxidoreductase FAD-binding domain AM586_07485 PF00175 Oxidoreductase NAD-binding domain AM586_07485 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_07490 PF01370 NAD dependent epimerase/dehydratase family AM586_07510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_07510 PF05231 MASE1 AM586_07510 PF07730 Histidine kinase AM586_07515 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM586_07515 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM586_07520 PF00684 DnaJ central domain AM586_07520 PF01556 DnaJ C terminal domain AM586_07520 PF00226 DnaJ domain AM586_07540 PF07690 Major Facilitator Superfamily AM586_07560 PF02515 CoA-transferase family III AM586_07565 PF02254 TrkA-N domain AM586_07565 PF00999 Sodium/hydrogen exchanger family AM586_07570 PF00155 Aminotransferase class I and II AM586_07570 PF00392 Bacterial regulatory proteins, gntR family AM586_07585 PF13520 Amino acid permease AM586_07630 PF04321 RmlD substrate binding domain AM586_07635 PF00579 tRNA synthetases class I (W and Y) AM586_07645 PF08448 PAS fold AM586_07645 PF13426 PAS domain AM586_07645 PF00072 Response regulator receiver domain AM586_07645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_07645 PF00512 His Kinase A (phospho-acceptor) domain AM586_07675 PF03009 Glycerophosphoryl diester phosphodiesterase family AM586_07685 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM586_07685 PF01411 tRNA synthetases class II (A) AM586_07685 PF02272 DHHA1 domain AM586_07690 PF01206 Sulfurtransferase TusA AM586_07695 PF01012 Electron transfer flavoprotein domain AM586_07700 PF01012 Electron transfer flavoprotein domain AM586_07700 PF00766 Electron transfer flavoprotein FAD-binding domain AM586_07705 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_07705 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_07705 PF12806 Acetyl-CoA dehydrogenase C-terminal like AM586_07705 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_07720 PF00886 Ribosomal protein S16 AM586_07725 PF05239 PRC-barrel domain AM586_07725 PF01782 RimM N-terminal domain AM586_07730 PF01746 tRNA (Guanine-1)-methyltransferase AM586_07735 PF01245 Ribosomal protein L19 AM586_07740 PF00293 NUDIX domain AM586_07745 PF17113 Regulatory signalling modulator protein AmpE AM586_07745 PF03186 CobD/Cbib protein AM586_07760 PF05193 Peptidase M16 inactive domain AM586_07760 PF00675 Insulinase (Peptidase family M16) AM586_07770 PF00392 Bacterial regulatory proteins, gntR family AM586_07770 PF07702 UTRA domain AM586_07785 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM586_07785 PF00933 Glycosyl hydrolase family 3 N terminal domain AM586_07790 PF01380 SIS domain AM586_07795 PF01979 Amidohydrolase family AM586_07800 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM586_07805 PF01594 AI-2E family transporter AM586_07810 PF01435 Peptidase family M48 AM586_07820 PF01757 Acyltransferase family AM586_07830 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AM586_07830 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM586_07855 PF13401 AAA domain AM586_07855 PF01471 Putative peptidoglycan binding domain AM586_07865 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM586_07880 PF05114 Protein of unknown function (DUF692) AM586_07895 PF10415 Fumarase C C-terminus AM586_07895 PF00206 Lyase AM586_07905 PF01638 HxlR-like helix-turn-helix AM586_07910 PF00893 Small Multidrug Resistance protein AM586_07925 PF01433 Peptidase family M1 domain AM586_07930 PF05649 Peptidase family M13 AM586_07930 PF01431 Peptidase family M13 AM586_07935 PF13847 Methyltransferase domain AM586_07935 PF03551 Transcriptional regulator PadR-like family AM586_07965 PF00326 Prolyl oligopeptidase family AM586_07965 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM586_07980 PF01554 MatE AM586_07995 PF01556 DnaJ C terminal domain AM586_07995 PF00226 DnaJ domain AM586_08005 PF01566 Natural resistance-associated macrophage protein AM586_08010 PF01965 DJ-1/PfpI family AM586_08015 PF01965 DJ-1/PfpI family AM586_08030 PF00326 Prolyl oligopeptidase family AM586_08050 PF07804 HipA-like C-terminal domain AM586_08050 PF13657 HipA N-terminal domain AM586_08060 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_08070 PF16736 Single Cache-like AM586_08070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_08070 PF00512 His Kinase A (phospho-acceptor) domain AM586_08070 PF00989 PAS fold AM586_08080 PF05717 IS66 Orf2 like protein AM586_08085 PF13005 zinc-finger binding domain of transposase IS66 AM586_08085 PF13007 Transposase C of IS166 homeodomain AM586_08085 PF13817 IS66 C-terminal element AM586_08085 PF03050 Transposase IS66 family AM586_08100 PF03707 Bacterial signalling protein N terminal repeat AM586_08100 PF00563 EAL domain AM586_08100 PF13188 PAS domain AM586_08100 PF00990 Diguanylate cyclase, GGDEF domain AM586_08110 PF00042 Globin AM586_08110 PF00970 Oxidoreductase FAD-binding domain AM586_08110 PF00175 Oxidoreductase NAD-binding domain AM586_08115 PF02082 Transcriptional regulator AM586_08130 PF00072 Response regulator receiver domain AM586_08130 PF01627 Hpt domain AM586_08130 PF00989 PAS fold AM586_08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_08130 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_08130 PF00512 His Kinase A (phospho-acceptor) domain AM586_08135 PF00072 Response regulator receiver domain AM586_08135 PF00990 Diguanylate cyclase, GGDEF domain AM586_08145 PF01566 Natural resistance-associated macrophage protein AM586_08150 PF01741 Large-conductance mechanosensitive channel, MscL AM586_08155 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_08160 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_08170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_08170 PF00034 Cytochrome c AM586_08170 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_08210 PF12419 SNF2 Helicase protein AM586_08210 PF00271 Helicase conserved C-terminal domain AM586_08210 PF00176 SNF2 family N-terminal domain AM586_08215 PF02646 RmuC family AM586_08245 PF13419 Haloacid dehalogenase-like hydrolase AM586_08255 PF00691 OmpA family AM586_08260 PF00521 DNA gyrase/topoisomerase IV, subunit A AM586_08260 PF03989 DNA gyrase C-terminal domain, beta-propeller AM586_08270 PF00266 Aminotransferase class-V AM586_08275 PF01842 ACT domain AM586_08275 PF01817 Chorismate mutase type II AM586_08275 PF00800 Prephenate dehydratase AM586_08285 PF02153 Prephenate dehydrogenase AM586_08285 PF01842 ACT domain AM586_08290 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM586_08295 PF02224 Cytidylate kinase AM586_08300 PF00575 S1 RNA binding domain AM586_08305 PF00216 Bacterial DNA-binding protein AM586_08315 PF18073 Rubredoxin metal binding domain AM586_08320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM586_08320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM586_08320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM586_08325 PF00294 pfkB family carbohydrate kinase AM586_08335 PF00291 Pyridoxal-phosphate dependent enzyme AM586_08345 PF13406 Transglycosylase SLT domain AM586_08350 PF13559 Domain of unknown function (DUF4129) AM586_08350 PF01841 Transglutaminase-like superfamily AM586_08350 PF11992 Domain of unknown function (DUF3488) AM586_08360 PF17863 AAA lid domain AM586_08360 PF07726 ATPase family associated with various cellular activities (AAA) AM586_08365 PF00850 Histone deacetylase domain AM586_08385 PF01926 50S ribosome-binding GTPase AM586_08390 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM586_08405 PF07715 TonB-dependent Receptor Plug Domain AM586_08405 PF00593 TonB dependent receptor AM586_08425 PF00512 His Kinase A (phospho-acceptor) domain AM586_08425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_08425 PF00672 HAMP domain AM586_08445 PF00486 Transcriptional regulatory protein, C terminal AM586_08445 PF00072 Response regulator receiver domain AM586_08450 PF00266 Aminotransferase class-V AM586_08455 PF01042 Endoribonuclease L-PSP AM586_08475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM586_08475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM586_08480 PF13742 OB-fold nucleic acid binding domain AM586_08480 PF02601 Exonuclease VII, large subunit AM586_08485 PF01618 MotA/TolQ/ExbB proton channel family AM586_08490 PF02472 Biopolymer transport protein ExbD/TolR AM586_08495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM586_08500 PF02348 Cytidylyltransferase AM586_08505 PF05191 Adenylate kinase, active site lid AM586_08510 PF03030 Inorganic H+ pyrophosphatase AM586_08520 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM586_08520 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM586_08530 PF00106 short chain dehydrogenase AM586_08540 PF00512 His Kinase A (phospho-acceptor) domain AM586_08540 PF01627 Hpt domain AM586_08540 PF00672 HAMP domain AM586_08540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_08540 PF00072 Response regulator receiver domain AM586_08540 PF17149 Periplasmic sensor domain found in signal transduction proteins AM586_08545 PF00072 Response regulator receiver domain AM586_08550 PF13426 PAS domain AM586_08550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_08550 PF00072 Response regulator receiver domain AM586_08585 PF02397 Bacterial sugar transferase AM586_08590 PF16363 GDP-mannose 4,6 dehydratase AM586_08595 PF01370 NAD dependent epimerase/dehydratase family AM586_08620 PF09721 Transmembrane exosortase (Exosortase_EpsH) AM586_08670 PF13439 Glycosyltransferase Family 4 AM586_08680 PF02350 UDP-N-acetylglucosamine 2-epimerase AM586_08685 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM586_08690 PF16363 GDP-mannose 4,6 dehydratase AM586_08695 PF00483 Nucleotidyl transferase AM586_08700 PF00483 Nucleotidyl transferase AM586_08700 PF01050 Mannose-6-phosphate isomerase AM586_08725 PF01228 Glycine radical AM586_08725 PF02901 Pyruvate formate lyase-like AM586_08730 PF04055 Radical SAM superfamily AM586_08735 PF06826 Predicted Permease Membrane Region AM586_08735 PF02080 TrkA-C domain AM586_08740 PF01226 Formate/nitrite transporter AM586_08745 PF00486 Transcriptional regulatory protein, C terminal AM586_08745 PF00072 Response regulator receiver domain AM586_08770 PF00082 Subtilase family AM586_08770 PF04151 Bacterial pre-peptidase C-terminal domain AM586_08780 PF08334 Type II secretion system (T2SS), protein G AM586_08780 PF07963 Prokaryotic N-terminal methylation motif AM586_08785 PF00482 Type II secretion system (T2SS), protein F AM586_08790 PF00437 Type II/IV secretion system protein AM586_08815 PF00263 Bacterial type II and III secretion system protein AM586_08815 PF03958 Bacterial type II/III secretion system short domain AM586_08825 PF08334 Type II secretion system (T2SS), protein G AM586_08825 PF07963 Prokaryotic N-terminal methylation motif AM586_08835 PF03023 Lipid II flippase MurJ AM586_08840 PF01649 Ribosomal protein S20 AM586_08850 PF00849 RNA pseudouridylate synthase AM586_08855 PF00180 Isocitrate/isopropylmalate dehydrogenase AM586_08860 PF00313 'Cold-shock' DNA-binding domain AM586_08865 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM586_08870 PF02861 Clp amino terminal domain, pathogenicity island component AM586_08870 PF17871 AAA lid domain AM586_08870 PF00004 ATPase family associated with various cellular activities (AAA) AM586_08870 PF07724 AAA domain (Cdc48 subfamily) AM586_08870 PF10431 C-terminal, D2-small domain, of ClpB protein AM586_08880 PF13533 Biotin-lipoyl like AM586_08900 PF00107 Zinc-binding dehydrogenase AM586_08900 PF16884 N-terminal domain of oxidoreductase AM586_08905 PF16925 Tetracyclin repressor-like, C-terminal domain AM586_08905 PF00440 Bacterial regulatory proteins, tetR family AM586_08910 PF00672 HAMP domain AM586_08910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_08910 PF02203 Tar ligand binding domain homologue AM586_08915 PF01053 Cys/Met metabolism PLP-dependent enzyme AM586_08925 PF00158 Sigma-54 interaction domain AM586_08925 PF02954 Bacterial regulatory protein, Fis family AM586_08925 PF06506 Propionate catabolism activator AM586_08930 PF04341 Protein of unknown function, DUF485 AM586_08935 PF00474 Sodium:solute symporter family AM586_08940 PF02225 PA domain AM586_08940 PF04389 Peptidase family M28 AM586_08950 PF00285 Citrate synthase, C-terminal domain AM586_08960 PF00694 Aconitase C-terminal domain AM586_08960 PF00330 Aconitase family (aconitate hydratase) AM586_08965 PF04303 PrpF protein AM586_08970 PF00563 EAL domain AM586_08970 PF00990 Diguanylate cyclase, GGDEF domain AM586_08970 PF03707 Bacterial signalling protein N terminal repeat AM586_08975 PF03372 Endonuclease/Exonuclease/phosphatase family AM586_08995 PF02789 Cytosol aminopeptidase family, N-terminal domain AM586_08995 PF00883 Cytosol aminopeptidase family, catalytic domain AM586_09005 PF03739 Lipopolysaccharide export system permease LptF/LptG AM586_09020 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM586_09020 PF14824 Sirohaem biosynthesis protein central AM586_09020 PF10414 Sirohaem synthase dimerisation region AM586_09025 PF00009 Elongation factor Tu GTP binding domain AM586_09030 PF01507 Phosphoadenosine phosphosulfate reductase family AM586_09035 PF01507 Phosphoadenosine phosphosulfate reductase family AM586_09045 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM586_09045 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM586_09050 PF03466 LysR substrate binding domain AM586_09050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_09075 PF13609 Gram-negative porin AM586_09085 PF04397 LytTr DNA-binding domain AM586_09085 PF00072 Response regulator receiver domain AM586_09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_09090 PF06580 Histidine kinase AM586_09100 PF00563 EAL domain AM586_09100 PF00990 Diguanylate cyclase, GGDEF domain AM586_09100 PF03707 Bacterial signalling protein N terminal repeat AM586_09105 PF03060 Nitronate monooxygenase AM586_09110 PF04461 Protein of unknown function (DUF520) AM586_09115 PF01565 FAD binding domain AM586_09115 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM586_09120 PF00485 Phosphoribulokinase / Uridine kinase family AM586_09125 PF00563 EAL domain AM586_09125 PF00360 Phytochrome region AM586_09125 PF01590 GAF domain AM586_09125 PF00990 Diguanylate cyclase, GGDEF domain AM586_09130 PF01339 CheB methylesterase AM586_09130 PF00072 Response regulator receiver domain AM586_09135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_09135 PF00072 Response regulator receiver domain AM586_09135 PF01627 Hpt domain AM586_09135 PF01584 CheW-like domain AM586_09145 PF01739 CheR methyltransferase, SAM binding domain AM586_09150 PF01584 CheW-like domain AM586_09155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_09155 PF00672 HAMP domain AM586_09155 PF12729 Four helix bundle sensory module for signal transduction AM586_09160 PF00764 Arginosuccinate synthase AM586_09165 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM586_09165 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM586_09170 PF03193 RsgA GTPase AM586_09175 PF01329 Pterin 4 alpha carbinolamine dehydratase AM586_09180 PF01435 Peptidase family M48 AM586_09180 PF16491 CAAX prenyl protease N-terminal, five membrane helices AM586_09185 PF00929 Exonuclease AM586_09190 PF00512 His Kinase A (phospho-acceptor) domain AM586_09190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_09210 PF00478 IMP dehydrogenase / GMP reductase domain AM586_09210 PF00571 CBS domain AM586_09215 PF08281 Sigma-70, region 4 AM586_09215 PF04542 Sigma-70 region 2 AM586_09225 PF00127 Copper binding proteins, plastocyanin/azurin family AM586_09230 PF02810 SEC-C motif AM586_09230 PF03695 Uncharacterised protein family (UPF0149) AM586_09235 PF07859 alpha/beta hydrolase fold AM586_09240 PF01636 Phosphotransferase enzyme family AM586_09260 PF02342 TerD domain AM586_09275 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_09280 PF00873 AcrB/AcrD/AcrF family AM586_09295 PF00300 Histidine phosphatase superfamily (branch 1) AM586_09295 PF13456 Reverse transcriptase-like AM586_09300 PF00375 Sodium:dicarboxylate symporter family AM586_09320 PF13525 Outer membrane lipoprotein AM586_09320 PF16331 TolA binding protein trimerisation AM586_09325 PF00691 OmpA family AM586_09330 PF04052 TolB amino-terminal domain AM586_09330 PF07676 WD40-like Beta Propeller Repeat AM586_09340 PF02472 Biopolymer transport protein ExbD/TolR AM586_09345 PF01618 MotA/TolQ/ExbB proton channel family AM586_09350 PF03061 Thioesterase superfamily AM586_09355 PF00106 short chain dehydrogenase AM586_09360 PF00464 Serine hydroxymethyltransferase AM586_09365 PF03477 ATP cone domain AM586_09395 PF01872 RibD C-terminal domain AM586_09395 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM586_09400 PF00677 Lumazine binding domain AM586_09405 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM586_09405 PF07676 WD40-like Beta Propeller Repeat AM586_09405 PF00326 Prolyl oligopeptidase family AM586_09410 PF05193 Peptidase M16 inactive domain AM586_09410 PF00675 Insulinase (Peptidase family M16) AM586_09415 PF00925 GTP cyclohydrolase II AM586_09415 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM586_09420 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM586_09425 PF01029 NusB family AM586_09430 PF01464 Transglycosylase SLT domain AM586_09435 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM586_09440 PF12169 DNA polymerase III subunits gamma and tau domain III AM586_09440 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM586_09440 PF12170 DNA polymerase III tau subunit V interacting with alpha AM586_09445 PF02575 YbaB/EbfC DNA-binding family AM586_09455 PF02132 RecR protein AM586_09455 PF13662 Toprim domain AM586_09460 PF13439 Glycosyltransferase Family 4 AM586_09460 PF00534 Glycosyl transferases group 1 AM586_09470 PF01804 Penicillin amidase AM586_09475 PF03707 Bacterial signalling protein N terminal repeat AM586_09475 PF00563 EAL domain AM586_09475 PF00990 Diguanylate cyclase, GGDEF domain AM586_09480 PF00672 HAMP domain AM586_09480 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_09480 PF00512 His Kinase A (phospho-acceptor) domain AM586_09480 PF01627 Hpt domain AM586_09480 PF00072 Response regulator receiver domain AM586_09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_09485 PF04328 Selenoprotein, putative AM586_09490 PF02554 Carbon starvation protein CstA AM586_09490 PF13722 5TM C-terminal transporter carbon starvation CstA AM586_09495 PF07730 Histidine kinase AM586_09495 PF17200 Single Cache domain 2 AM586_09500 PF00072 Response regulator receiver domain AM586_09500 PF00196 Bacterial regulatory proteins, luxR family AM586_09510 PF00563 EAL domain AM586_09510 PF03707 Bacterial signalling protein N terminal repeat AM586_09510 PF00990 Diguanylate cyclase, GGDEF domain AM586_09530 PF01425 Amidase AM586_09535 PF00593 TonB dependent receptor AM586_09535 PF07715 TonB-dependent Receptor Plug Domain AM586_09540 PF00128 Alpha amylase, catalytic domain AM586_09540 PF11941 Domain of unknown function (DUF3459) AM586_09555 PF00106 short chain dehydrogenase AM586_09560 PF00106 short chain dehydrogenase AM586_09575 PF01569 PAP2 superfamily AM586_09580 PF00781 Diacylglycerol kinase catalytic domain AM586_09585 PF00149 Calcineurin-like phosphoesterase AM586_09590 PF13396 Phospholipase_D-nuclease N-terminal AM586_09590 PF13091 PLD-like domain AM586_09600 PF01063 Amino-transferase class IV AM586_09610 PF00293 NUDIX domain AM586_09615 PF13505 Outer membrane protein beta-barrel domain AM586_09615 PF00691 OmpA family AM586_09645 PF05170 AsmA family AM586_09655 PF05736 OprF membrane domain AM586_09655 PF00691 OmpA family AM586_09660 PF00210 Ferritin-like domain AM586_09700 PF01594 AI-2E family transporter AM586_09710 PF00691 OmpA family AM586_09710 PF01389 OmpA-like transmembrane domain AM586_09720 PF08534 Redoxin AM586_09720 PF00462 Glutaredoxin AM586_09735 PF00106 short chain dehydrogenase AM586_09740 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM586_09755 PF01261 Xylose isomerase-like TIM barrel AM586_09770 PF00271 Helicase conserved C-terminal domain AM586_09770 PF00270 DEAD/DEAH box helicase AM586_09775 PF00459 Inositol monophosphatase family AM586_09780 PF00588 SpoU rRNA Methylase family AM586_09790 PF05199 GMC oxidoreductase AM586_09790 PF00732 GMC oxidoreductase AM586_09795 PF01674 Lipase (class 2) AM586_09800 PF00072 Response regulator receiver domain AM586_09805 PF08359 YsiA-like protein, C-terminal region AM586_09805 PF00440 Bacterial regulatory proteins, tetR family AM586_09810 PF03641 Possible lysine decarboxylase AM586_09815 PF00990 Diguanylate cyclase, GGDEF domain AM586_09815 PF00072 Response regulator receiver domain AM586_09820 PF00990 Diguanylate cyclase, GGDEF domain AM586_09820 PF03707 Bacterial signalling protein N terminal repeat AM586_09820 PF00563 EAL domain AM586_09845 PF11339 Protein of unknown function (DUF3141) AM586_09850 PF01515 Phosphate acetyl/butaryl transferase AM586_09855 PF00871 Acetokinase family AM586_09860 PF01144 Coenzyme A transferase AM586_09865 PF01144 Coenzyme A transferase AM586_09885 PF00231 ATP synthase AM586_09890 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM586_09890 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM586_09905 PF00873 AcrB/AcrD/AcrF family AM586_09910 PF02321 Outer membrane efflux protein AM586_09920 PF07690 Major Facilitator Superfamily AM586_09925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_09925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_09930 PF03466 LysR substrate binding domain AM586_09930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_09955 PF08447 PAS fold AM586_09955 PF13426 PAS domain AM586_09955 PF13493 Domain of unknown function (DUF4118) AM586_09955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_09955 PF00989 PAS fold AM586_09955 PF00512 His Kinase A (phospho-acceptor) domain AM586_09960 PF00196 Bacterial regulatory proteins, luxR family AM586_09960 PF00072 Response regulator receiver domain AM586_09970 PF16884 N-terminal domain of oxidoreductase AM586_09970 PF00107 Zinc-binding dehydrogenase AM586_09975 PF00551 Formyl transferase AM586_09975 PF01842 ACT domain AM586_09980 PF07152 YaeQ protein AM586_09995 PF00437 Type II/IV secretion system protein AM586_10005 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_10005 PF00034 Cytochrome c AM586_10005 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_10015 PF00034 Cytochrome c AM586_10030 PF04542 Sigma-70 region 2 AM586_10030 PF04539 Sigma-70 region 3 AM586_10030 PF03979 Sigma-70 factor, region 1.1 AM586_10030 PF04546 Sigma-70, non-essential region AM586_10030 PF00140 Sigma-70 factor, region 1.2 AM586_10030 PF04545 Sigma-70, region 4 AM586_10050 PF00311 Phosphoenolpyruvate carboxylase AM586_10055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM586_10055 PF03900 Porphobilinogen deaminase, C-terminal domain AM586_10060 PF02602 Uroporphyrinogen-III synthase HemD AM586_10065 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM586_10075 PF00719 Inorganic pyrophosphatase AM586_10080 PF00082 Subtilase family AM586_10080 PF06280 Fn3-like domain AM586_10080 PF02225 PA domain AM586_10095 PF02653 Branched-chain amino acid transport system / permease component AM586_10105 PF00005 ABC transporter AM586_10110 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_10110 PF00005 ABC transporter AM586_10125 PF07715 TonB-dependent Receptor Plug Domain AM586_10125 PF00593 TonB dependent receptor AM586_10130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_10130 PF03466 LysR substrate binding domain AM586_10150 PF00037 4Fe-4S binding domain AM586_10150 PF13247 4Fe-4S dicluster domain AM586_10190 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_10195 PF00510 Cytochrome c oxidase subunit III AM586_10210 PF01070 FMN-dependent dehydrogenase AM586_10215 PF00732 GMC oxidoreductase AM586_10215 PF05199 GMC oxidoreductase AM586_10230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM586_10230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM586_10230 PF00205 Thiamine pyrophosphate enzyme, central domain AM586_10235 PF00106 short chain dehydrogenase AM586_10245 PF00795 Carbon-nitrogen hydrolase AM586_10245 PF02540 NAD synthase AM586_10250 PF00543 Nitrogen regulatory protein P-II AM586_10255 PF00072 Response regulator receiver domain AM586_10260 PF03458 UPF0126 domain AM586_10265 PF08446 PAS fold AM586_10265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_10265 PF01590 GAF domain AM586_10265 PF00360 Phytochrome region AM586_10265 PF00512 His Kinase A (phospho-acceptor) domain AM586_10275 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_10280 PF01580 FtsK/SpoIIIE family AM586_10280 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM586_10280 PF17854 FtsK alpha domain AM586_10280 PF09397 Ftsk gamma domain AM586_10285 PF03548 Outer membrane lipoprotein carrier protein LolA AM586_10330 PF10544 T5orf172 domain AM586_10380 PF03389 MobA/MobL family AM586_10380 PF01443 Viral (Superfamily 1) RNA helicase AM586_10380 PF17841 BID domain of Bartonella effector protein (Bep) AM586_10415 PF02403 Seryl-tRNA synthetase N-terminal domain AM586_10415 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM586_10425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_10425 PF18698 Histidine kinase sensor domain AM586_10425 PF00512 His Kinase A (phospho-acceptor) domain AM586_10425 PF00672 HAMP domain AM586_10430 PF00072 Response regulator receiver domain AM586_10440 PF00672 HAMP domain AM586_10440 PF02203 Tar ligand binding domain homologue AM586_10440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_10445 PF17827 PrmC N-terminal domain AM586_10445 PF05175 Methyltransferase small domain AM586_10455 PF04228 Putative neutral zinc metallopeptidase AM586_10460 PF00107 Zinc-binding dehydrogenase AM586_10460 PF08240 Alcohol dehydrogenase GroES-like domain AM586_10460 PF13823 Alcohol dehydrogenase GroES-associated AM586_10470 PF01483 Proprotein convertase P-domain AM586_10470 PF02868 Thermolysin metallopeptidase, alpha-helical domain AM586_10470 PF01447 Thermolysin metallopeptidase, catalytic domain AM586_10470 PF07504 Fungalysin/Thermolysin Propeptide Motif AM586_10475 PF01464 Transglycosylase SLT domain AM586_10475 PF10145 Phage-related minor tail protein AM586_10475 PF01551 Peptidase family M23 AM586_10480 PF01476 LysM domain AM586_10480 PF03734 L,D-transpeptidase catalytic domain AM586_10485 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_10520 PF00563 EAL domain AM586_10520 PF03707 Bacterial signalling protein N terminal repeat AM586_10520 PF00990 Diguanylate cyclase, GGDEF domain AM586_10535 PF17158 Membrane-associated sensor, integral membrane domain AM586_10535 PF00990 Diguanylate cyclase, GGDEF domain AM586_10540 PF02541 Ppx/GppA phosphatase family AM586_10555 PF00005 ABC transporter AM586_10560 PF10017 Histidine-specific methyltransferase, SAM-dependent AM586_10565 PF12867 DinB superfamily AM586_10565 PF03781 Sulfatase-modifying factor enzyme 1 AM586_10570 PF03631 Virulence factor BrkB AM586_10580 PF08502 LeuA allosteric (dimerisation) domain AM586_10580 PF00682 HMGL-like AM586_10595 PF00586 AIR synthase related protein, N-terminal domain AM586_10595 PF02769 AIR synthase related protein, C-terminal domain AM586_10605 PF12867 DinB superfamily AM586_10605 PF03781 Sulfatase-modifying factor enzyme 1 AM586_10610 PF00271 Helicase conserved C-terminal domain AM586_10610 PF00270 DEAD/DEAH box helicase AM586_10615 PF01464 Transglycosylase SLT domain AM586_10615 PF01476 LysM domain AM586_10635 PF00563 EAL domain AM586_10635 PF00990 Diguanylate cyclase, GGDEF domain AM586_10635 PF03707 Bacterial signalling protein N terminal repeat AM586_10640 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_10650 PF00814 Glycoprotease family AM586_10660 PF03167 Uracil DNA glycosylase superfamily AM586_10670 PF07690 Major Facilitator Superfamily AM586_10675 PF01168 Alanine racemase, N-terminal domain AM586_10675 PF00842 Alanine racemase, C-terminal domain AM586_10680 PF18073 Rubredoxin metal binding domain AM586_10690 PF12849 PBP superfamily domain AM586_10695 PF00528 Binding-protein-dependent transport system inner membrane component AM586_10700 PF00528 Binding-protein-dependent transport system inner membrane component AM586_10705 PF00005 ABC transporter AM586_10710 PF01895 PhoU domain AM586_10715 PF00072 Response regulator receiver domain AM586_10715 PF00486 Transcriptional regulatory protein, C terminal AM586_10720 PF11808 Phosphate regulon sensor protein PhoR AM586_10720 PF00512 His Kinase A (phospho-acceptor) domain AM586_10720 PF00989 PAS fold AM586_10720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_10725 PF01734 Patatin-like phospholipase AM586_10730 PF03928 Haem-degrading AM586_10735 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM586_10735 PF00117 Glutamine amidotransferase class-I AM586_10740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM586_10740 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM586_10740 PF02142 MGS-like domain AM586_10745 PF01272 Transcription elongation factor, GreA/GreB, C-term AM586_10745 PF03449 Transcription elongation factor, N-terminal AM586_10760 PF01728 FtsJ-like methyltransferase AM586_10765 PF01434 Peptidase family M41 AM586_10765 PF06480 FtsH Extracellular AM586_10765 PF17862 AAA+ lid domain AM586_10765 PF00004 ATPase family associated with various cellular activities (AAA) AM586_10770 PF00809 Pterin binding enzyme AM586_10775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM586_10775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM586_10775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM586_10775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM586_10815 PF02563 Polysaccharide biosynthesis/export protein AM586_10815 PF10531 SLBB domain AM586_10820 PF02706 Chain length determinant protein AM586_10820 PF13807 G-rich domain on putative tyrosine kinase AM586_10820 PF13614 AAA domain AM586_10845 PF02397 Bacterial sugar transferase AM586_10850 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM586_10875 PF02350 UDP-N-acetylglucosamine 2-epimerase AM586_10895 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM586_10900 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_10905 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM586_10905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_10910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM586_10910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM586_10910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM586_10915 PF02719 Polysaccharide biosynthesis protein AM586_10940 PF07694 5TMR of 5TMR-LYT AM586_10940 PF06580 Histidine kinase AM586_10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_10945 PF04397 LytTr DNA-binding domain AM586_10945 PF00072 Response regulator receiver domain AM586_10955 PF08774 VRR-NUC domain AM586_10955 PF18081 Fanconi anemia-associated nuclease SAP domain AM586_10980 PF04972 BON domain AM586_10980 PF00691 OmpA family AM586_11015 PF05638 Type VI secretion system effector, Hcp AM586_11020 PF07724 AAA domain (Cdc48 subfamily) AM586_11020 PF17871 AAA lid domain AM586_11020 PF10431 C-terminal, D2-small domain, of ClpB protein AM586_11020 PF00004 ATPase family associated with various cellular activities (AAA) AM586_11040 PF09278 MerR, DNA binding AM586_11040 PF00376 MerR family regulatory protein AM586_11065 PF08461 Ribonuclease R winged-helix domain AM586_11065 PF00773 RNB domain AM586_11065 PF08206 Ribonuclease B OB domain AM586_11065 PF00575 S1 RNA binding domain AM586_11065 PF17876 Cold shock domain AM586_11070 PF00588 SpoU rRNA Methylase family AM586_11070 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM586_11075 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_11080 PF04337 Protein of unknown function, DUF480 AM586_11095 PF00005 ABC transporter AM586_11100 PF07702 UTRA domain AM586_11100 PF00392 Bacterial regulatory proteins, gntR family AM586_11105 PF00149 Calcineurin-like phosphoesterase AM586_11110 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM586_11115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM586_11120 PF09190 DALR domain AM586_11120 PF01406 tRNA synthetases class I (C) catalytic domain AM586_11130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM586_11135 PF01171 PP-loop family AM586_11135 PF09179 TilS substrate binding domain AM586_11135 PF11734 TilS substrate C-terminal domain AM586_11140 PF01842 ACT domain AM586_11140 PF13840 ACT domain AM586_11140 PF00696 Amino acid kinase family AM586_11155 PF00296 Luciferase-like monooxygenase AM586_11160 PF00171 Aldehyde dehydrogenase family AM586_11165 PF12833 Helix-turn-helix domain AM586_11165 PF06719 AraC-type transcriptional regulator N-terminus AM586_11195 PF00109 Beta-ketoacyl synthase, N-terminal domain AM586_11195 PF00698 Acyl transferase domain AM586_11195 PF16197 Ketoacyl-synthetase C-terminal extension AM586_11195 PF08659 KR domain AM586_11195 PF00550 Phosphopantetheine attachment site AM586_11195 PF02801 Beta-ketoacyl synthase, C-terminal domain AM586_11195 PF14765 Polyketide synthase dehydratase AM586_11195 PF08240 Alcohol dehydrogenase GroES-like domain AM586_11195 PF00107 Zinc-binding dehydrogenase AM586_11200 PF03466 LysR substrate binding domain AM586_11200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11215 PF12852 Cupin AM586_11215 PF12833 Helix-turn-helix domain AM586_11225 PF03466 LysR substrate binding domain AM586_11225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11250 PF01292 Prokaryotic cytochrome b561 AM586_11260 PF00753 Metallo-beta-lactamase superfamily AM586_11265 PF01925 Sulfite exporter TauE/SafE AM586_11275 PF04143 Sulphur transport AM586_11285 PF03848 Tellurite resistance protein TehB AM586_11300 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM586_11305 PF01042 Endoribonuclease L-PSP AM586_11310 PF14031 Putative serine dehydratase domain AM586_11310 PF01168 Alanine racemase, N-terminal domain AM586_11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11315 PF03466 LysR substrate binding domain AM586_11325 PF00171 Aldehyde dehydrogenase family AM586_11335 PF01266 FAD dependent oxidoreductase AM586_11340 PF04324 BFD-like [2Fe-2S] binding domain AM586_11340 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_11350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM586_11350 PF00005 ABC transporter AM586_11355 PF00528 Binding-protein-dependent transport system inner membrane component AM586_11355 PF12911 N-terminal TM domain of oligopeptide transport permease C AM586_11360 PF00528 Binding-protein-dependent transport system inner membrane component AM586_11365 PF01266 FAD dependent oxidoreductase AM586_11375 PF00593 TonB dependent receptor AM586_11375 PF07715 TonB-dependent Receptor Plug Domain AM586_11390 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_11405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM586_11405 PF12793 Sugar transport-related sRNA regulator N-term AM586_11420 PF10415 Fumarase C C-terminus AM586_11420 PF00206 Lyase AM586_11430 PF00171 Aldehyde dehydrogenase family AM586_11435 PF01037 Lrp/AsnC ligand binding domain AM586_11440 PF00202 Aminotransferase class-III AM586_11445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_11470 PF07732 Multicopper oxidase AM586_11470 PF07731 Multicopper oxidase AM586_11470 PF00394 Multicopper oxidase AM586_11485 PF00593 TonB dependent receptor AM586_11485 PF07715 TonB-dependent Receptor Plug Domain AM586_11510 PF07690 Major Facilitator Superfamily AM586_11515 PF03466 LysR substrate binding domain AM586_11515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11525 PF07519 Tannase and feruloyl esterase AM586_11530 PF13458 Periplasmic binding protein AM586_11535 PF00550 Phosphopantetheine attachment site AM586_11535 PF00501 AMP-binding enzyme AM586_11535 PF07993 Male sterility protein AM586_11540 PF00171 Aldehyde dehydrogenase family AM586_11545 PF00378 Enoyl-CoA hydratase/isomerase AM586_11555 PF13458 Periplasmic binding protein AM586_11560 PF13609 Gram-negative porin AM586_11565 PF01614 Bacterial transcriptional regulator AM586_11565 PF09339 IclR helix-turn-helix domain AM586_11570 PF01144 Coenzyme A transferase AM586_11575 PF01144 Coenzyme A transferase AM586_11580 PF02803 Thiolase, C-terminal domain AM586_11580 PF00108 Thiolase, N-terminal domain AM586_11590 PF02653 Branched-chain amino acid transport system / permease component AM586_11595 PF00005 ABC transporter AM586_11595 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_11600 PF00005 ABC transporter AM586_11605 PF13458 Periplasmic binding protein AM586_11615 PF00355 Rieske [2Fe-2S] domain AM586_11620 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_11620 PF00175 Oxidoreductase NAD-binding domain AM586_11625 PF00561 alpha/beta hydrolase fold AM586_11630 PF00206 Lyase AM586_11630 PF10397 Adenylosuccinate lyase C-terminus AM586_11635 PF00775 Dioxygenase AM586_11640 PF00775 Dioxygenase AM586_11640 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal AM586_11645 PF09339 IclR helix-turn-helix domain AM586_11645 PF01614 Bacterial transcriptional regulator AM586_11650 PF02311 AraC-like ligand binding domain AM586_11650 PF12833 Helix-turn-helix domain AM586_11655 PF01494 FAD binding domain AM586_11660 PF12802 MarR family AM586_11665 PF07690 Major Facilitator Superfamily AM586_11670 PF07690 Major Facilitator Superfamily AM586_11675 PF01037 Lrp/AsnC ligand binding domain AM586_11695 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11695 PF03466 LysR substrate binding domain AM586_11700 PF00375 Sodium:dicarboxylate symporter family AM586_11705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_11710 PF01145 SPFH domain / Band 7 family AM586_11710 PF16200 C-terminal region of band_7 AM586_11720 PF00672 HAMP domain AM586_11720 PF02203 Tar ligand binding domain homologue AM586_11720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_11725 PF00072 Response regulator receiver domain AM586_11725 PF04397 LytTr DNA-binding domain AM586_11730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_11730 PF07694 5TMR of 5TMR-LYT AM586_11730 PF06580 Histidine kinase AM586_11735 PF00753 Metallo-beta-lactamase superfamily AM586_11740 PF03737 Aldolase/RraA AM586_11745 PF04909 Amidohydrolase AM586_11750 PF04303 PrpF protein AM586_11755 PF03466 LysR substrate binding domain AM586_11755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11760 PF07690 Major Facilitator Superfamily AM586_11765 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit AM586_11765 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM586_11770 PF13609 Gram-negative porin AM586_11795 PF02541 Ppx/GppA phosphatase family AM586_11805 PF02503 Polyphosphate kinase middle domain AM586_11805 PF17941 Polyphosphate kinase C-terminal domain 1 AM586_11805 PF13090 Polyphosphate kinase C-terminal domain 2 AM586_11805 PF13089 Polyphosphate kinase N-terminal domain AM586_11810 PF03466 LysR substrate binding domain AM586_11810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11825 PF03466 LysR substrate binding domain AM586_11840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11840 PF03466 LysR substrate binding domain AM586_11845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_11845 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_11860 PF05726 Pirin C-terminal cupin domain AM586_11860 PF02678 Pirin AM586_11865 PF00563 EAL domain AM586_11865 PF03707 Bacterial signalling protein N terminal repeat AM586_11865 PF00990 Diguanylate cyclase, GGDEF domain AM586_11870 PF00106 short chain dehydrogenase AM586_11875 PF02798 Glutathione S-transferase, N-terminal domain AM586_11875 PF00043 Glutathione S-transferase, C-terminal domain AM586_11890 PF00403 Heavy-metal-associated domain AM586_11895 PF00816 H-NS histone family AM586_11905 PF00892 EamA-like transporter family AM586_11910 PF01925 Sulfite exporter TauE/SafE AM586_11915 PF01545 Cation efflux family AM586_11915 PF16916 Dimerisation domain of Zinc Transporter AM586_11920 PF00583 Acetyltransferase (GNAT) family AM586_11920 PF13380 CoA binding domain AM586_11920 PF13607 Succinyl-CoA ligase like flavodoxin domain AM586_11940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_11940 PF03466 LysR substrate binding domain AM586_11950 PF00072 Response regulator receiver domain AM586_11950 PF00196 Bacterial regulatory proteins, luxR family AM586_11955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_11955 PF00512 His Kinase A (phospho-acceptor) domain AM586_11955 PF00989 PAS fold AM586_11960 PF00083 Sugar (and other) transporter AM586_11965 PF00270 DEAD/DEAH box helicase AM586_11965 PF00271 Helicase conserved C-terminal domain AM586_11980 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_11985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_11985 PF07730 Histidine kinase AM586_11995 PF00989 PAS fold AM586_11995 PF00672 HAMP domain AM586_11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_11995 PF18698 Histidine kinase sensor domain AM586_11995 PF00512 His Kinase A (phospho-acceptor) domain AM586_12005 PF03707 Bacterial signalling protein N terminal repeat AM586_12005 PF00990 Diguanylate cyclase, GGDEF domain AM586_12005 PF00563 EAL domain AM586_12060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_12060 PF00512 His Kinase A (phospho-acceptor) domain AM586_12065 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM586_12075 PF01292 Prokaryotic cytochrome b561 AM586_12080 PF03466 LysR substrate binding domain AM586_12080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_12085 PF00180 Isocitrate/isopropylmalate dehydrogenase AM586_12090 PF00375 Sodium:dicarboxylate symporter family AM586_12095 PF05161 MOFRL family AM586_12095 PF13660 Domain of unknown function (DUF4147) AM586_12100 PF02887 Pyruvate kinase, alpha/beta domain AM586_12100 PF00224 Pyruvate kinase, barrel domain AM586_12110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_12110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_12120 PF04389 Peptidase family M28 AM586_12120 PF02225 PA domain AM586_12130 PF01068 ATP dependent DNA ligase domain AM586_12130 PF13298 DNA polymerase Ligase (LigD) AM586_12130 PF04679 ATP dependent DNA ligase C terminal region AM586_12140 PF02735 Ku70/Ku80 beta-barrel domain AM586_12150 PF00990 Diguanylate cyclase, GGDEF domain AM586_12155 PF00916 Sulfate permease family AM586_12155 PF01740 STAS domain AM586_12160 PF01774 UreD urease accessory protein AM586_12170 PF00699 Urease beta subunit AM586_12175 PF00449 Urease alpha-subunit, N-terminal domain AM586_12175 PF01979 Amidohydrolase family AM586_12180 PF05194 UreE urease accessory protein, C-terminal domain AM586_12180 PF02814 UreE urease accessory protein, N-terminal domain AM586_12185 PF01730 UreF AM586_12190 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM586_12195 PF04955 HupE / UreJ protein AM586_12205 PF03960 ArsC family AM586_12215 PF00248 Aldo/keto reductase family AM586_12220 PF03707 Bacterial signalling protein N terminal repeat AM586_12220 PF00990 Diguanylate cyclase, GGDEF domain AM586_12220 PF13188 PAS domain AM586_12220 PF00563 EAL domain AM586_12225 PF07694 5TMR of 5TMR-LYT AM586_12225 PF00990 Diguanylate cyclase, GGDEF domain AM586_12235 PF00501 AMP-binding enzyme AM586_12235 PF13193 AMP-binding enzyme C-terminal domain AM586_12260 PF11838 ERAP1-like C-terminal domain AM586_12260 PF01433 Peptidase family M1 domain AM586_12265 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_12270 PF00893 Small Multidrug Resistance protein AM586_12280 PF01370 NAD dependent epimerase/dehydratase family AM586_12285 PF00535 Glycosyl transferase family 2 AM586_12290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM586_12300 PF02684 Lipid-A-disaccharide synthetase AM586_12300 PF07578 Lipid A Biosynthesis N-terminal domain AM586_12320 PF02678 Pirin AM586_12320 PF05726 Pirin C-terminal cupin domain AM586_12325 PF02525 Flavodoxin-like fold AM586_12330 PF03466 LysR substrate binding domain AM586_12330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_12335 PF02666 Phosphatidylserine decarboxylase AM586_12340 PF00593 TonB dependent receptor AM586_12340 PF07715 TonB-dependent Receptor Plug Domain AM586_12350 PF00501 AMP-binding enzyme AM586_12350 PF13193 AMP-binding enzyme C-terminal domain AM586_12355 PF01494 FAD binding domain AM586_12360 PF00106 short chain dehydrogenase AM586_12370 PF00378 Enoyl-CoA hydratase/isomerase AM586_12375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_12375 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_12375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_12385 PF01230 HIT domain AM586_12400 PF00557 Metallopeptidase family M24 AM586_12405 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_12415 PF00291 Pyridoxal-phosphate dependent enzyme AM586_12425 PF07690 Major Facilitator Superfamily AM586_12430 PF01966 HD domain AM586_12480 PF00069 Protein kinase domain AM586_12515 PF03793 PASTA domain AM586_12515 PF00069 Protein kinase domain AM586_12525 PF00149 Calcineurin-like phosphoesterase AM586_12545 PF02586 SOS response associated peptidase (SRAP) AM586_13115 PF01804 Penicillin amidase AM586_13125 PF00265 Thymidine kinase AM586_13135 PF03572 Peptidase family S41 AM586_13135 PF00595 PDZ domain AM586_13135 PF11818 C-terminal domain of tail specific protease (DUF3340) AM586_13135 PF17804 Tail specific protease N-terminal domain AM586_13145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_13145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_13145 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_13150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_13150 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_13150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_13155 PF01575 MaoC like domain AM586_13155 PF00171 Aldehyde dehydrogenase family AM586_13160 PF00563 EAL domain AM586_13160 PF01590 GAF domain AM586_13160 PF00360 Phytochrome region AM586_13160 PF00990 Diguanylate cyclase, GGDEF domain AM586_13165 PF00512 His Kinase A (phospho-acceptor) domain AM586_13165 PF00072 Response regulator receiver domain AM586_13165 PF01627 Hpt domain AM586_13165 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_13165 PF00672 HAMP domain AM586_13165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_13170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_13170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_13170 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_13180 PF00300 Histidine phosphatase superfamily (branch 1) AM586_13185 PF00437 Type II/IV secretion system protein AM586_13190 PF00482 Type II secretion system (T2SS), protein F AM586_13200 PF00114 Pilin (bacterial filament) AM586_13200 PF07963 Prokaryotic N-terminal methylation motif AM586_13210 PF00114 Pilin (bacterial filament) AM586_13210 PF07963 Prokaryotic N-terminal methylation motif AM586_13250 PF00263 Bacterial type II and III secretion system protein AM586_13250 PF03958 Bacterial type II/III secretion system short domain AM586_13255 PF13401 AAA domain AM586_13255 PF01471 Putative peptidoglycan binding domain AM586_13265 PF00155 Aminotransferase class I and II AM586_13275 PF03883 Peroxide stress protein YaaA AM586_13280 PF13525 Outer membrane lipoprotein AM586_13285 PF00849 RNA pseudouridylate synthase AM586_13285 PF01479 S4 domain AM586_13300 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AM586_13305 PF07879 PHB/PHA accumulation regulator DNA-binding domain AM586_13305 PF05233 PHB accumulation regulatory domain AM586_13310 PF18693 TRAM domain AM586_13310 PF00919 Uncharacterized protein family UPF0004 AM586_13310 PF04055 Radical SAM superfamily AM586_13315 PF01053 Cys/Met metabolism PLP-dependent enzyme AM586_13325 PF01012 Electron transfer flavoprotein domain AM586_13325 PF00766 Electron transfer flavoprotein FAD-binding domain AM586_13330 PF01012 Electron transfer flavoprotein domain AM586_13335 PF02515 CoA-transferase family III AM586_13340 PF02803 Thiolase, C-terminal domain AM586_13340 PF00108 Thiolase, N-terminal domain AM586_13345 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_13345 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_13345 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM586_13350 PF00378 Enoyl-CoA hydratase/isomerase AM586_13365 PF07690 Major Facilitator Superfamily AM586_13370 PF01613 Flavin reductase like domain AM586_13380 PF00085 Thioredoxin AM586_13400 PF02595 Glycerate kinase family AM586_13405 PF16363 GDP-mannose 4,6 dehydratase AM586_13420 PF00535 Glycosyl transferase family 2 AM586_13425 PF01370 NAD dependent epimerase/dehydratase family AM586_13430 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM586_13430 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM586_13430 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM586_13440 PF00005 ABC transporter AM586_13445 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_13445 PF00005 ABC transporter AM586_13465 PF00892 EamA-like transporter family AM586_13470 PF13404 AsnC-type helix-turn-helix domain AM586_13470 PF01037 Lrp/AsnC ligand binding domain AM586_13490 PF00107 Zinc-binding dehydrogenase AM586_13490 PF16884 N-terminal domain of oxidoreductase AM586_13500 PF02559 CarD-like/TRCF domain AM586_13500 PF00271 Helicase conserved C-terminal domain AM586_13500 PF17757 UvrB interaction domain AM586_13500 PF00270 DEAD/DEAH box helicase AM586_13500 PF03461 TRCF domain AM586_13520 PF17092 Penicillin-binding protein OB-like domain AM586_13520 PF00912 Transglycosylase AM586_13520 PF00905 Penicillin binding protein transpeptidase domain AM586_13525 PF03169 OPT oligopeptide transporter protein AM586_13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_13535 PF03466 LysR substrate binding domain AM586_13540 PF02040 Arsenical pump membrane protein AM586_13555 PF00854 POT family AM586_13560 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM586_13560 PF03641 Possible lysine decarboxylase AM586_13560 PF11892 Domain of unknown function (DUF3412) AM586_13565 PF00152 tRNA synthetases class II (D, K and N) AM586_13565 PF01336 OB-fold nucleic acid binding domain AM586_13570 PF13419 Haloacid dehalogenase-like hydrolase AM586_13575 PF03462 PCRF domain AM586_13575 PF00472 RF-1 domain AM586_13580 PF02872 5'-nucleotidase, C-terminal domain AM586_13580 PF00149 Calcineurin-like phosphoesterase AM586_13610 PF00472 RF-1 domain AM586_13615 PF02272 DHHA1 domain AM586_13615 PF01368 DHH family AM586_13615 PF17768 RecJ OB domain AM586_13625 PF02687 FtsX-like permease family AM586_13625 PF12704 MacB-like periplasmic core domain AM586_13630 PF00005 ABC transporter AM586_13635 PF01026 TatD related DNase AM586_13640 PF16671 Actin cross-linking domain AM586_13640 PF04717 Type VI secretion system, phage-baseplate injector AM586_13655 PF03772 Competence protein AM586_13655 PF00753 Metallo-beta-lactamase superfamily AM586_13660 PF00672 HAMP domain AM586_13660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_13660 PF00512 His Kinase A (phospho-acceptor) domain AM586_13660 PF16527 Two-component sensor protein CpxA, periplasmic domain AM586_13665 PF00072 Response regulator receiver domain AM586_13665 PF00486 Transcriptional regulatory protein, C terminal AM586_13680 PF00692 dUTPase AM586_13685 PF01276 Orn/Lys/Arg decarboxylase, major domain AM586_13685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM586_13685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM586_13700 PF00186 Dihydrofolate reductase AM586_13705 PF00303 Thymidylate synthase AM586_13715 PF00672 HAMP domain AM586_13715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_13715 PF12729 Four helix bundle sensory module for signal transduction AM586_13720 PF00664 ABC transporter transmembrane region AM586_13720 PF00005 ABC transporter AM586_13740 PF02913 FAD linked oxidases, C-terminal domain AM586_13740 PF01565 FAD binding domain AM586_13750 PF03358 NADPH-dependent FMN reductase AM586_13755 PF03631 Virulence factor BrkB AM586_13775 PF01053 Cys/Met metabolism PLP-dependent enzyme AM586_13785 PF00990 Diguanylate cyclase, GGDEF domain AM586_13785 PF03707 Bacterial signalling protein N terminal repeat AM586_13785 PF00563 EAL domain AM586_13790 PF01264 Chorismate synthase AM586_13800 PF13188 PAS domain AM586_13800 PF03707 Bacterial signalling protein N terminal repeat AM586_13800 PF00990 Diguanylate cyclase, GGDEF domain AM586_13800 PF00563 EAL domain AM586_13805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_13805 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_13805 PF18158 Adaptive response protein AidB N-terminal domain AM586_13820 PF00313 'Cold-shock' DNA-binding domain AM586_13825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_13825 PF03466 LysR substrate binding domain AM586_13830 PF01274 Malate synthase AM586_13835 PF01323 DSBA-like thioredoxin domain AM586_13840 PF00753 Metallo-beta-lactamase superfamily AM586_13840 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM586_13845 PF01209 ubiE/COQ5 methyltransferase family AM586_13850 PF00075 RNase H AM586_13855 PF00929 Exonuclease AM586_13875 PF00689 Cation transporting ATPase, C-terminus AM586_13875 PF00690 Cation transporter/ATPase, N-terminus AM586_13880 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) AM586_13890 PF00072 Response regulator receiver domain AM586_13890 PF13188 PAS domain AM586_13890 PF08448 PAS fold AM586_13890 PF00512 His Kinase A (phospho-acceptor) domain AM586_13890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_13895 PF00072 Response regulator receiver domain AM586_13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_13895 PF13426 PAS domain AM586_13905 PF13091 PLD-like domain AM586_13910 PF00365 Phosphofructokinase AM586_13915 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM586_13915 PF02896 PEP-utilising enzyme, TIM barrel domain AM586_13915 PF00391 PEP-utilising enzyme, mobile domain AM586_13940 PF13533 Biotin-lipoyl like AM586_13945 PF00005 ABC transporter AM586_13955 PF08240 Alcohol dehydrogenase GroES-like domain AM586_13960 PF00690 Cation transporter/ATPase, N-terminus AM586_13960 PF00689 Cation transporting ATPase, C-terminus AM586_13975 PF13607 Succinyl-CoA ligase like flavodoxin domain AM586_13975 PF13380 CoA binding domain AM586_13975 PF00583 Acetyltransferase (GNAT) family AM586_13985 PF00107 Zinc-binding dehydrogenase AM586_13985 PF08240 Alcohol dehydrogenase GroES-like domain AM586_14000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_14000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_14005 PF00561 alpha/beta hydrolase fold AM586_14010 PF01758 Sodium Bile acid symporter family AM586_14015 PF17938 Tetracyclin repressor-like, C-terminal domain AM586_14015 PF00440 Bacterial regulatory proteins, tetR family AM586_14020 PF04966 Carbohydrate-selective porin, OprB family AM586_14025 PF01011 PQQ enzyme repeat AM586_14025 PF13360 PQQ-like domain AM586_14035 PF03466 LysR substrate binding domain AM586_14035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_14045 PF12849 PBP superfamily domain AM586_14055 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus AM586_14055 PF00561 alpha/beta hydrolase fold AM586_14060 PF00563 EAL domain AM586_14060 PF00990 Diguanylate cyclase, GGDEF domain AM586_14060 PF03707 Bacterial signalling protein N terminal repeat AM586_14065 PF00593 TonB dependent receptor AM586_14065 PF07715 TonB-dependent Receptor Plug Domain AM586_14075 PF13426 PAS domain AM586_14075 PF00072 Response regulator receiver domain AM586_14075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_14090 PF03466 LysR substrate binding domain AM586_14090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_14095 PF00205 Thiamine pyrophosphate enzyme, central domain AM586_14095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM586_14095 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM586_14100 PF01261 Xylose isomerase-like TIM barrel AM586_14105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM586_14105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM586_14110 PF05161 MOFRL family AM586_14110 PF13660 Domain of unknown function (DUF4147) AM586_14115 PF02887 Pyruvate kinase, alpha/beta domain AM586_14115 PF00224 Pyruvate kinase, barrel domain AM586_14120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_14120 PF00672 HAMP domain AM586_14120 PF02203 Tar ligand binding domain homologue AM586_14125 PF01546 Peptidase family M20/M25/M40 AM586_14125 PF07687 Peptidase dimerisation domain AM586_14130 PF01546 Peptidase family M20/M25/M40 AM586_14130 PF07687 Peptidase dimerisation domain AM586_14145 PF00576 HIUase/Transthyretin family AM586_14155 PF00860 Permease family AM586_14165 PF07690 Major Facilitator Superfamily AM586_14175 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM586_14180 PF00999 Sodium/hydrogen exchanger family AM586_14195 PF01594 AI-2E family transporter AM586_14200 PF00355 Rieske [2Fe-2S] domain AM586_14215 PF00149 Calcineurin-like phosphoesterase AM586_14220 PF13520 Amino acid permease AM586_14230 PF08443 RimK-like ATP-grasp domain AM586_14230 PF08245 Mur ligase middle domain AM586_14230 PF02875 Mur ligase family, glutamate ligase domain AM586_14235 PF08443 RimK-like ATP-grasp domain AM586_14235 PF08245 Mur ligase middle domain AM586_14235 PF02875 Mur ligase family, glutamate ligase domain AM586_14240 PF03575 Peptidase family S51 AM586_14260 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_14265 PF00012 Hsp70 protein AM586_14270 PF00929 Exonuclease AM586_14280 PF00326 Prolyl oligopeptidase family AM586_14280 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM586_14285 PF03707 Bacterial signalling protein N terminal repeat AM586_14285 PF00990 Diguanylate cyclase, GGDEF domain AM586_14285 PF00563 EAL domain AM586_14295 PF00155 Aminotransferase class I and II AM586_14300 PF01370 NAD dependent epimerase/dehydratase family AM586_14305 PF03315 Serine dehydratase beta chain AM586_14305 PF03313 Serine dehydratase alpha chain AM586_14310 PF14821 Threonine synthase N terminus AM586_14310 PF00291 Pyridoxal-phosphate dependent enzyme AM586_14315 PF00994 Probable molybdopterin binding domain AM586_14315 PF03453 MoeA N-terminal region (domain I and II) AM586_14315 PF03454 MoeA C-terminal region (domain IV) AM586_14320 PF02597 ThiS family AM586_14325 PF03480 Bacterial extracellular solute-binding protein, family 7 AM586_14330 PF04151 Bacterial pre-peptidase C-terminal domain AM586_14330 PF04389 Peptidase family M28 AM586_14335 PF07715 TonB-dependent Receptor Plug Domain AM586_14335 PF00593 TonB dependent receptor AM586_14340 PF13404 AsnC-type helix-turn-helix domain AM586_14340 PF01037 Lrp/AsnC ligand binding domain AM586_14360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_14360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_14375 PF01593 Flavin containing amine oxidoreductase AM586_14390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_14405 PF05698 Bacterial trigger factor protein (TF) C-terminus AM586_14405 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_14405 PF05697 Bacterial trigger factor protein (TF) AM586_14410 PF00574 Clp protease AM586_14415 PF07724 AAA domain (Cdc48 subfamily) AM586_14415 PF10431 C-terminal, D2-small domain, of ClpB protein AM586_14415 PF06689 ClpX C4-type zinc finger AM586_14420 PF05362 Lon protease (S16) C-terminal proteolytic domain AM586_14420 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM586_14420 PF00004 ATPase family associated with various cellular activities (AAA) AM586_14425 PF00216 Bacterial DNA-binding protein AM586_14440 PF05698 Bacterial trigger factor protein (TF) C-terminus AM586_14445 PF00581 Rhodanese-like domain AM586_14450 PF13472 GDSL-like Lipase/Acylhydrolase family AM586_14455 PF00005 ABC transporter AM586_14460 PF01256 Carbohydrate kinase AM586_14460 PF03853 YjeF-related protein N-terminus AM586_14465 PF05378 Hydantoinase/oxoprolinase N-terminal region AM586_14465 PF01968 Hydantoinase/oxoprolinase AM586_14470 PF00072 Response regulator receiver domain AM586_14475 PF02769 AIR synthase related protein, C-terminal domain AM586_14475 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM586_14475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM586_14480 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM586_14480 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_14485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_14485 PF00512 His Kinase A (phospho-acceptor) domain AM586_14485 PF00672 HAMP domain AM586_14505 PF04279 Intracellular septation protein A AM586_14510 PF01641 SelR domain AM586_14515 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM586_14520 PF00501 AMP-binding enzyme AM586_14520 PF13193 AMP-binding enzyme C-terminal domain AM586_14540 PF05675 Protein of unknown function (DUF817) AM586_14545 PF13302 Acetyltransferase (GNAT) domain AM586_14550 PF00378 Enoyl-CoA hydratase/isomerase AM586_14550 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_14550 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_14555 PF07690 Major Facilitator Superfamily AM586_14560 PF00083 Sugar (and other) transporter AM586_14580 PF00106 short chain dehydrogenase AM586_14595 PF00106 short chain dehydrogenase AM586_14615 PF01571 Aminomethyltransferase folate-binding domain AM586_14620 PF02618 YceG-like family AM586_14625 PF02223 Thymidylate kinase AM586_14630 PF09115 DNA polymerase III, delta subunit, C terminal AM586_14640 PF00583 Acetyltransferase (GNAT) family AM586_14655 PF01026 TatD related DNase AM586_14710 PF00072 Response regulator receiver domain AM586_14710 PF00158 Sigma-54 interaction domain AM586_14710 PF02954 Bacterial regulatory protein, Fis family AM586_14725 PF01136 Peptidase family U32 AM586_14725 PF12392 Collagenase AM586_14740 PF00384 Molybdopterin oxidoreductase AM586_14775 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_14780 PF01112 Asparaginase AM586_14785 PF00005 ABC transporter AM586_14790 PF00528 Binding-protein-dependent transport system inner membrane component AM586_14795 PF00528 Binding-protein-dependent transport system inner membrane component AM586_14800 PF03932 CutC family AM586_14805 PF00480 ROK family AM586_14810 PF08240 Alcohol dehydrogenase GroES-like domain AM586_14810 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM586_14815 PF13823 Alcohol dehydrogenase GroES-associated AM586_14815 PF00107 Zinc-binding dehydrogenase AM586_14815 PF08240 Alcohol dehydrogenase GroES-like domain AM586_14825 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_14840 PF02899 Phage integrase, N-terminal SAM-like domain AM586_14840 PF00589 Phage integrase family AM586_14850 PF00106 short chain dehydrogenase AM586_14855 PF03007 Wax ester synthase-like Acyl-CoA acyltransferase domain AM586_14855 PF06974 Protein of unknown function (DUF1298) AM586_14865 PF00501 AMP-binding enzyme AM586_14865 PF13193 AMP-binding enzyme C-terminal domain AM586_14890 PF00011 Hsp20/alpha crystallin family AM586_14895 PF13545 Crp-like helix-turn-helix domain AM586_14895 PF00027 Cyclic nucleotide-binding domain AM586_14900 PF00072 Response regulator receiver domain AM586_14900 PF00196 Bacterial regulatory proteins, luxR family AM586_14905 PF07730 Histidine kinase AM586_14905 PF17200 Single Cache domain 2 AM586_14920 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM586_14920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM586_14940 PF01979 Amidohydrolase family AM586_14955 PF00534 Glycosyl transferases group 1 AM586_14965 PF02910 Fumarate reductase flavoprotein C-term AM586_14965 PF00890 FAD binding domain AM586_14975 PF02146 Sir2 family AM586_14980 PF00561 alpha/beta hydrolase fold AM586_14985 PF00293 NUDIX domain AM586_14990 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM586_14990 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM586_14995 PF02445 Quinolinate synthetase A protein AM586_15000 PF12848 ABC transporter AM586_15000 PF00005 ABC transporter AM586_15010 PF17676 LD-carboxypeptidase C-terminal domain AM586_15010 PF02016 LD-carboxypeptidase N-terminal domain AM586_15015 PF00561 alpha/beta hydrolase fold AM586_15020 PF14437 MafB19-like deaminase AM586_15025 PF01242 6-pyruvoyl tetrahydropterin synthase AM586_15040 PF00990 Diguanylate cyclase, GGDEF domain AM586_15040 PF00563 EAL domain AM586_15040 PF00360 Phytochrome region AM586_15040 PF01590 GAF domain AM586_15045 PF02954 Bacterial regulatory protein, Fis family AM586_15045 PF00989 PAS fold AM586_15045 PF00158 Sigma-54 interaction domain AM586_15050 PF02515 CoA-transferase family III AM586_15055 PF00682 HMGL-like AM586_15065 PF00005 ABC transporter AM586_15070 PF00528 Binding-protein-dependent transport system inner membrane component AM586_15075 PF00528 Binding-protein-dependent transport system inner membrane component AM586_15080 PF00330 Aconitase family (aconitate hydratase) AM586_15085 PF00694 Aconitase C-terminal domain AM586_15140 PF00672 HAMP domain AM586_15140 PF17149 Periplasmic sensor domain found in signal transduction proteins AM586_15140 PF00512 His Kinase A (phospho-acceptor) domain AM586_15140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_15140 PF00072 Response regulator receiver domain AM586_15140 PF01627 Hpt domain AM586_15145 PF00293 NUDIX domain AM586_15155 PF00924 Mechanosensitive ion channel AM586_15165 PF03275 UDP-galactopyranose mutase AM586_15180 PF00155 Aminotransferase class I and II AM586_15180 PF00392 Bacterial regulatory proteins, gntR family AM586_15185 PF12704 MacB-like periplasmic core domain AM586_15185 PF02687 FtsX-like permease family AM586_15200 PF00860 Permease family AM586_15205 PF03707 Bacterial signalling protein N terminal repeat AM586_15205 PF00990 Diguanylate cyclase, GGDEF domain AM586_15205 PF00563 EAL domain AM586_15210 PF00072 Response regulator receiver domain AM586_15210 PF00196 Bacterial regulatory proteins, luxR family AM586_15220 PF07690 Major Facilitator Superfamily AM586_15220 PF00083 Sugar (and other) transporter AM586_15225 PF00085 Thioredoxin AM586_15230 PF13382 Adenine deaminase C-terminal domain AM586_15230 PF01979 Amidohydrolase family AM586_15240 PF00924 Mechanosensitive ion channel AM586_15250 PF00912 Transglycosylase AM586_15250 PF17092 Penicillin-binding protein OB-like domain AM586_15250 PF00905 Penicillin binding protein transpeptidase domain AM586_15255 PF00563 EAL domain AM586_15255 PF00990 Diguanylate cyclase, GGDEF domain AM586_15255 PF03707 Bacterial signalling protein N terminal repeat AM586_15260 PF00654 Voltage gated chloride channel AM586_15275 PF07715 TonB-dependent Receptor Plug Domain AM586_15275 PF00593 TonB dependent receptor AM586_15280 PF00072 Response regulator receiver domain AM586_15285 PF00512 His Kinase A (phospho-acceptor) domain AM586_15285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_15295 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM586_15300 PF00510 Cytochrome c oxidase subunit III AM586_15305 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_15310 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM586_15310 PF06481 COX Aromatic Rich Motif AM586_15315 PF00083 Sugar (and other) transporter AM586_15315 PF07690 Major Facilitator Superfamily AM586_15320 PF12792 CSS motif domain associated with EAL AM586_15320 PF00563 EAL domain AM586_15330 PF05067 Manganese containing catalase AM586_15345 PF00563 EAL domain AM586_15345 PF00990 Diguanylate cyclase, GGDEF domain AM586_15345 PF03707 Bacterial signalling protein N terminal repeat AM586_15350 PF04172 LrgB-like family AM586_15355 PF03788 LrgA family AM586_15360 PF00672 HAMP domain AM586_15360 PF02203 Tar ligand binding domain homologue AM586_15360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_15370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_15375 PF03466 LysR substrate binding domain AM586_15380 PF04209 homogentisate 1,2-dioxygenase AM586_15390 PF00571 CBS domain AM586_15390 PF03471 Transporter associated domain AM586_15390 PF01595 Cyclin M transmembrane N-terminal domain AM586_15405 PF04143 Sulphur transport AM586_15415 PF01494 FAD binding domain AM586_15420 PF00753 Metallo-beta-lactamase superfamily AM586_15420 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM586_15430 PF00324 Amino acid permease AM586_15440 PF00360 Phytochrome region AM586_15440 PF00563 EAL domain AM586_15440 PF01590 GAF domain AM586_15440 PF00990 Diguanylate cyclase, GGDEF domain AM586_15445 PF07690 Major Facilitator Superfamily AM586_15455 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_15465 PF00392 Bacterial regulatory proteins, gntR family AM586_15465 PF07729 FCD domain AM586_15485 PF00571 CBS domain AM586_15485 PF00291 Pyridoxal-phosphate dependent enzyme AM586_15490 PF07883 Cupin domain AM586_15500 PF16338 Domain of unknown function (DUF4968) AM586_15500 PF17137 Domain of unknown function (DUF5110) AM586_15500 PF13802 Galactose mutarotase-like AM586_15500 PF01055 Glycosyl hydrolases family 31 AM586_15505 PF03372 Endonuclease/Exonuclease/phosphatase family AM586_15520 PF00743 Flavin-binding monooxygenase-like AM586_15525 PF00106 short chain dehydrogenase AM586_15530 PF00561 alpha/beta hydrolase fold AM586_15535 PF00072 Response regulator receiver domain AM586_15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_15535 PF13426 PAS domain AM586_15540 PF08450 SMP-30/Gluconolactonase/LRE-like region AM586_15545 PF00676 Dehydrogenase E1 component AM586_15545 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal AM586_15550 PF02779 Transketolase, pyrimidine binding domain AM586_15550 PF02780 Transketolase, C-terminal domain AM586_15555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM586_15555 PF02817 e3 binding domain AM586_15555 PF00364 Biotin-requiring enzyme AM586_15560 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_15560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM586_15575 PF02525 Flavodoxin-like fold AM586_15580 PF02254 TrkA-N domain AM586_15580 PF00999 Sodium/hydrogen exchanger family AM586_15585 PF00990 Diguanylate cyclase, GGDEF domain AM586_15585 PF00563 EAL domain AM586_15585 PF03707 Bacterial signalling protein N terminal repeat AM586_15610 PF00356 Bacterial regulatory proteins, lacI family AM586_15615 PF00005 ABC transporter AM586_15615 PF17912 MalK OB fold domain AM586_15620 PF00528 Binding-protein-dependent transport system inner membrane component AM586_15625 PF00528 Binding-protein-dependent transport system inner membrane component AM586_15640 PF04616 Glycosyl hydrolases family 43 AM586_15655 PF00578 AhpC/TSA family AM586_15660 PF01841 Transglutaminase-like superfamily AM586_15665 PF02411 MerT mercuric transport protein AM586_15670 PF00403 Heavy-metal-associated domain AM586_15685 PF00722 Glycosyl hydrolases family 16 AM586_15695 PF04820 Tryptophan halogenase AM586_15710 PF04820 Tryptophan halogenase AM586_15715 PF02659 Putative manganese efflux pump AM586_15720 PF07690 Major Facilitator Superfamily AM586_15725 PF01418 Helix-turn-helix domain, rpiR family AM586_15725 PF01380 SIS domain AM586_15725 PF02685 Glucokinase AM586_15730 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM586_15730 PF00933 Glycosyl hydrolase family 3 N terminal domain AM586_15735 PF00232 Glycosyl hydrolase family 1 AM586_15740 PF00356 Bacterial regulatory proteins, lacI family AM586_15745 PF00005 ABC transporter AM586_15745 PF17912 MalK OB fold domain AM586_15750 PF00528 Binding-protein-dependent transport system inner membrane component AM586_15760 PF01547 Bacterial extracellular solute-binding protein AM586_15765 PF03358 NADPH-dependent FMN reductase AM586_15780 PF00781 Diacylglycerol kinase catalytic domain AM586_15785 PF13458 Periplasmic binding protein AM586_15790 PF01575 MaoC like domain AM586_15795 PF00582 Universal stress protein family AM586_15800 PF00582 Universal stress protein family AM586_15805 PF08281 Sigma-70, region 4 AM586_15805 PF04542 Sigma-70 region 2 AM586_15860 PF05567 Neisseria PilC beta-propeller domain AM586_15885 PF07963 Prokaryotic N-terminal methylation motif AM586_15885 PF00114 Pilin (bacterial filament) AM586_15910 PF02627 Carboxymuconolactone decarboxylase family AM586_15920 PF00989 PAS fold AM586_15920 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_15920 PF01627 Hpt domain AM586_15920 PF00512 His Kinase A (phospho-acceptor) domain AM586_15920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_15920 PF00072 Response regulator receiver domain AM586_15935 PF01894 Uncharacterised protein family UPF0047 AM586_15945 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_15945 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_15950 PF00941 FAD binding domain in molybdopterin dehydrogenase AM586_15950 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM586_15955 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_15955 PF01799 [2Fe-2S] binding domain AM586_15960 PF13569 Domain of unknown function (DUF4132) AM586_15965 PF07728 AAA domain (dynein-related subfamily) AM586_15975 PF05762 VWA domain containing CoxE-like protein AM586_15995 PF13426 PAS domain AM586_15995 PF00072 Response regulator receiver domain AM586_15995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_16000 PF00528 Binding-protein-dependent transport system inner membrane component AM586_16005 PF00005 ABC transporter AM586_16015 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM586_16025 PF07995 Glucose / Sorbosone dehydrogenase AM586_16030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_16035 PF00873 AcrB/AcrD/AcrF family AM586_16040 PF00563 EAL domain AM586_16040 PF00360 Phytochrome region AM586_16040 PF00990 Diguanylate cyclase, GGDEF domain AM586_16040 PF01590 GAF domain AM586_16045 PF00072 Response regulator receiver domain AM586_16045 PF01584 CheW-like domain AM586_16050 PF01037 Lrp/AsnC ligand binding domain AM586_16055 PF01266 FAD dependent oxidoreductase AM586_16060 PF00842 Alanine racemase, C-terminal domain AM586_16060 PF01168 Alanine racemase, N-terminal domain AM586_16065 PF00136 DNA polymerase family B AM586_16065 PF03104 DNA polymerase family B, exonuclease domain AM586_16070 PF04305 Protein of unknown function (DUF455) AM586_16100 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_16105 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM586_16120 PF01464 Transglycosylase SLT domain AM586_16125 PF00072 Response regulator receiver domain AM586_16125 PF00196 Bacterial regulatory proteins, luxR family AM586_16135 PF07963 Prokaryotic N-terminal methylation motif AM586_16140 PF07963 Prokaryotic N-terminal methylation motif AM586_16140 PF00114 Pilin (bacterial filament) AM586_16145 PF00263 Bacterial type II and III secretion system protein AM586_16145 PF03958 Bacterial type II/III secretion system short domain AM586_16160 PF00437 Type II/IV secretion system protein AM586_16165 PF00482 Type II secretion system (T2SS), protein F AM586_16210 PF07730 Histidine kinase AM586_16210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_16230 PF00155 Aminotransferase class I and II AM586_16235 PF00512 His Kinase A (phospho-acceptor) domain AM586_16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_16240 PF00072 Response regulator receiver domain AM586_16245 PF00892 EamA-like transporter family AM586_16250 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM586_16250 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM586_16255 PF03949 Malic enzyme, NAD binding domain AM586_16255 PF01515 Phosphate acetyl/butaryl transferase AM586_16255 PF00390 Malic enzyme, N-terminal domain AM586_16260 PF03992 Antibiotic biosynthesis monooxygenase AM586_16265 PF01613 Flavin reductase like domain AM586_16300 PF01070 FMN-dependent dehydrogenase AM586_16305 PF03458 UPF0126 domain AM586_16310 PF00860 Permease family AM586_16315 PF02634 FdhD/NarQ family AM586_16325 PF00005 ABC transporter AM586_16330 PF03649 Uncharacterised protein family (UPF0014) AM586_16340 PF09335 SNARE associated Golgi protein AM586_16350 PF06906 Protein of unknown function (DUF1272) AM586_16365 PF07690 Major Facilitator Superfamily AM586_16380 PF13183 4Fe-4S dicluster domain AM586_16380 PF02913 FAD linked oxidases, C-terminal domain AM586_16380 PF01565 FAD binding domain AM586_16385 PF07729 FCD domain AM586_16385 PF00392 Bacterial regulatory proteins, gntR family AM586_16390 PF00266 Aminotransferase class-V AM586_16395 PF07690 Major Facilitator Superfamily AM586_16400 PF00378 Enoyl-CoA hydratase/isomerase AM586_16405 PF02515 CoA-transferase family III AM586_16410 PF07690 Major Facilitator Superfamily AM586_16415 PF00174 Oxidoreductase molybdopterin binding domain AM586_16420 PF01292 Prokaryotic cytochrome b561 AM586_16425 PF00501 AMP-binding enzyme AM586_16425 PF13193 AMP-binding enzyme C-terminal domain AM586_16435 PF02627 Carboxymuconolactone decarboxylase family AM586_16445 PF00561 alpha/beta hydrolase fold AM586_16455 PF01253 Translation initiation factor SUI1 AM586_16475 PF17042 Nucleotide-binding C-terminal domain AM586_16475 PF07005 Sugar-binding N-terminal domain AM586_16480 PF00596 Class II Aldolase and Adducin N-terminal domain AM586_16520 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM586_16525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_16525 PF03466 LysR substrate binding domain AM586_16535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_16535 PF03466 LysR substrate binding domain AM586_16540 PF13378 Enolase C-terminal domain-like AM586_16540 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM586_16545 PF02426 Muconolactone delta-isomerase AM586_16550 PF00775 Dioxygenase AM586_16550 PF04444 Catechol dioxygenase N terminus AM586_16555 PF00355 Rieske [2Fe-2S] domain AM586_16555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM586_16560 PF00866 Ring hydroxylating beta subunit AM586_16565 PF00970 Oxidoreductase FAD-binding domain AM586_16565 PF00175 Oxidoreductase NAD-binding domain AM586_16565 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_16570 PF00106 short chain dehydrogenase AM586_16575 PF12146 Serine aminopeptidase, S33 AM586_16580 PF13609 Gram-negative porin AM586_16585 PF07690 Major Facilitator Superfamily AM586_16590 PF03594 Benzoate membrane transport protein AM586_16595 PF00561 alpha/beta hydrolase fold AM586_16605 PF00701 Dihydrodipicolinate synthetase family AM586_16610 PF00171 Aldehyde dehydrogenase family AM586_16625 PF07690 Major Facilitator Superfamily AM586_16630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM586_16630 PF13378 Enolase C-terminal domain-like AM586_16635 PF00672 HAMP domain AM586_16635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_16635 PF02203 Tar ligand binding domain homologue AM586_16640 PF07690 Major Facilitator Superfamily AM586_16650 PF13609 Gram-negative porin AM586_16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_16655 PF03466 LysR substrate binding domain AM586_16670 PF18381 YcaO cyclodehydratase C-terminal domain AM586_16670 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM586_16675 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM586_16680 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM586_16685 PF03466 LysR substrate binding domain AM586_16685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_16695 PF02653 Branched-chain amino acid transport system / permease component AM586_16700 PF02653 Branched-chain amino acid transport system / permease component AM586_16705 PF00005 ABC transporter AM586_16710 PF13407 Periplasmic binding protein domain AM586_16725 PF04616 Glycosyl hydrolases family 43 AM586_16730 PF06964 Alpha-L-arabinofuranosidase C-terminal domain AM586_16740 PF00171 Aldehyde dehydrogenase family AM586_16750 PF00920 Dehydratase family AM586_16755 PF08450 SMP-30/Gluconolactonase/LRE-like region AM586_16760 PF01263 Aldose 1-epimerase AM586_16765 PF04616 Glycosyl hydrolases family 43 AM586_16765 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM586_16785 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM586_16785 PF04616 Glycosyl hydrolases family 43 AM586_16790 PF12802 MarR family AM586_16795 PF12327 FtsZ family, C-terminal domain AM586_16795 PF00091 Tubulin/FtsZ family, GTPase domain AM586_16800 PF12833 Helix-turn-helix domain AM586_16815 PF02233 NAD(P) transhydrogenase beta subunit AM586_16820 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM586_16825 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM586_16825 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM586_16830 PF00920 Dehydratase family AM586_16835 PF00171 Aldehyde dehydrogenase family AM586_16840 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM586_16840 PF00205 Thiamine pyrophosphate enzyme, central domain AM586_16840 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM586_16845 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_16850 PF01799 [2Fe-2S] binding domain AM586_16850 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_16850 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_16850 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_16860 PF00107 Zinc-binding dehydrogenase AM586_16860 PF08240 Alcohol dehydrogenase GroES-like domain AM586_16865 PF00939 Sodium:sulfate symporter transmembrane region AM586_16870 PF12833 Helix-turn-helix domain AM586_16875 PF10503 Esterase PHB depolymerase AM586_16880 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_16880 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_16885 PF00463 Isocitrate lyase family AM586_16900 PF02540 NAD synthase AM586_16900 PF00117 Glutamine amidotransferase class-I AM586_16900 PF00958 GMP synthase C terminal domain AM586_16905 PF00571 CBS domain AM586_16905 PF00478 IMP dehydrogenase / GMP reductase domain AM586_16915 PF03658 RnfH family Ubiquitin AM586_16925 PF01668 SmpB protein AM586_16930 PF01739 CheR methyltransferase, SAM binding domain AM586_16930 PF03705 CheR methyltransferase, all-alpha domain AM586_16930 PF08448 PAS fold AM586_16930 PF01339 CheB methylesterase AM586_16940 PF07690 Major Facilitator Superfamily AM586_16945 PF10502 Signal peptidase, peptidase S26 AM586_16960 PF07715 TonB-dependent Receptor Plug Domain AM586_16960 PF00593 TonB dependent receptor AM586_16965 PF00106 short chain dehydrogenase AM586_16970 PF01145 SPFH domain / Band 7 family AM586_16980 PF17158 Membrane-associated sensor, integral membrane domain AM586_16980 PF00990 Diguanylate cyclase, GGDEF domain AM586_16985 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM586_16990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM586_16990 PF00391 PEP-utilising enzyme, mobile domain AM586_16990 PF02896 PEP-utilising enzyme, TIM barrel domain AM586_16995 PF03618 Kinase/pyrophosphorylase AM586_17000 PF00990 Diguanylate cyclase, GGDEF domain AM586_17000 PF00563 EAL domain AM586_17000 PF03707 Bacterial signalling protein N terminal repeat AM586_17005 PF00588 SpoU rRNA Methylase family AM586_17005 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM586_17010 PF01351 Ribonuclease HII AM586_17015 PF02684 Lipid-A-disaccharide synthetase AM586_17020 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_17020 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM586_17025 PF07977 FabA-like domain AM586_17030 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_17030 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM586_17040 PF07244 Surface antigen variable number repeat AM586_17040 PF01103 Surface antigen AM586_17045 PF17820 PDZ domain AM586_17045 PF02163 Peptidase family M50 AM586_17050 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM586_17050 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM586_17050 PF13288 DXP reductoisomerase C-terminal domain AM586_17060 PF01255 Putative undecaprenyl diphosphate synthase AM586_17065 PF01765 Ribosome recycling factor AM586_17070 PF00696 Amino acid kinase family AM586_17075 PF00889 Elongation factor TS AM586_17080 PF00318 Ribosomal protein S2 AM586_17085 PF00557 Metallopeptidase family M24 AM586_17090 PF01842 ACT domain AM586_17090 PF08335 GlnD PII-uridylyltransferase AM586_17090 PF01966 HD domain AM586_17090 PF01909 Nucleotidyltransferase domain AM586_17095 PF00849 RNA pseudouridylate synthase AM586_17095 PF01479 S4 domain AM586_17115 PF00854 POT family AM586_17125 PF03707 Bacterial signalling protein N terminal repeat AM586_17125 PF00990 Diguanylate cyclase, GGDEF domain AM586_17125 PF00563 EAL domain AM586_17130 PF00155 Aminotransferase class I and II AM586_17135 PF00672 HAMP domain AM586_17135 PF00989 PAS fold AM586_17135 PF00512 His Kinase A (phospho-acceptor) domain AM586_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_17135 PF18698 Histidine kinase sensor domain AM586_17140 PF06745 KaiC AM586_17170 PF01327 Polypeptide deformylase AM586_17175 PF00483 Nucleotidyl transferase AM586_17205 PF01022 Bacterial regulatory protein, arsR family AM586_17215 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_17225 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM586_17230 PF02040 Arsenical pump membrane protein AM586_17235 PF03960 ArsC family AM586_17240 PF03358 NADPH-dependent FMN reductase AM586_17245 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM586_17250 PF00376 MerR family regulatory protein AM586_17250 PF09278 MerR, DNA binding AM586_17255 PF02411 MerT mercuric transport protein AM586_17260 PF00403 Heavy-metal-associated domain AM586_17265 PF13580 SIS domain AM586_17280 PF00873 AcrB/AcrD/AcrF family AM586_17285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_17285 PF00529 HlyD membrane-fusion protein of T1SS AM586_17290 PF02321 Outer membrane efflux protein AM586_17300 PF00403 Heavy-metal-associated domain AM586_17305 PF13411 MerR HTH family regulatory protein AM586_17315 PF03239 Iron permease FTR1 family AM586_17330 PF13276 HTH-like domain AM586_17330 PF00665 Integrase core domain AM586_17330 PF13333 Integrase core domain AM586_17340 PF00873 AcrB/AcrD/AcrF family AM586_17345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_17355 PF09278 MerR, DNA binding AM586_17355 PF00376 MerR family regulatory protein AM586_17360 PF00403 Heavy-metal-associated domain AM586_17395 PF00394 Multicopper oxidase AM586_17395 PF07732 Multicopper oxidase AM586_17395 PF07731 Multicopper oxidase AM586_17400 PF00672 HAMP domain AM586_17400 PF00512 His Kinase A (phospho-acceptor) domain AM586_17400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_17405 PF00486 Transcriptional regulatory protein, C terminal AM586_17405 PF00072 Response regulator receiver domain AM586_17410 PF11525 Copper resistance protein K AM586_17455 PF05275 Copper resistance protein B precursor (CopB) AM586_17460 PF00394 Multicopper oxidase AM586_17460 PF07731 Multicopper oxidase AM586_17460 PF07732 Multicopper oxidase AM586_17485 PF00460 Flagella basal body rod protein AM586_17510 PF00175 Oxidoreductase NAD-binding domain AM586_17510 PF00970 Oxidoreductase FAD-binding domain AM586_17510 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_17520 PF07715 TonB-dependent Receptor Plug Domain AM586_17520 PF00593 TonB dependent receptor AM586_17540 PF00072 Response regulator receiver domain AM586_17540 PF00486 Transcriptional regulatory protein, C terminal AM586_17545 PF11525 Copper resistance protein K AM586_17550 PF00376 MerR family regulatory protein AM586_17550 PF09278 MerR, DNA binding AM586_17555 PF07298 NnrU protein AM586_17570 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM586_17575 PF00146 NADH dehydrogenase AM586_17585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM586_17590 PF00361 Proton-conducting membrane transporter AM586_17590 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM586_17590 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus AM586_17595 PF00361 Proton-conducting membrane transporter AM586_17595 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AM586_17600 PF00361 Proton-conducting membrane transporter AM586_17615 PF00529 HlyD membrane-fusion protein of T1SS AM586_17615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_17620 PF00873 AcrB/AcrD/AcrF family AM586_17635 PF00004 ATPase family associated with various cellular activities (AAA) AM586_17670 PF06470 SMC proteins Flexible Hinge Domain AM586_17670 PF02463 RecF/RecN/SMC N terminal domain AM586_17680 PF01569 PAP2 superfamily AM586_17705 PF01597 Glycine cleavage H-protein AM586_17715 PF02203 Tar ligand binding domain homologue AM586_17715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_17715 PF00672 HAMP domain AM586_17725 PF00009 Elongation factor Tu GTP binding domain AM586_17725 PF03144 Elongation factor Tu domain 2 AM586_17725 PF16658 Class II release factor RF3, C-terminal domain AM586_17740 PF00196 Bacterial regulatory proteins, luxR family AM586_17740 PF00072 Response regulator receiver domain AM586_17750 PF00216 Bacterial DNA-binding protein AM586_17760 PF01409 tRNA synthetases class II core domain (F) AM586_17760 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM586_17765 PF00453 Ribosomal protein L20 AM586_17770 PF01632 Ribosomal protein L35 AM586_17775 PF00707 Translation initiation factor IF-3, C-terminal domain AM586_17775 PF05198 Translation initiation factor IF-3, N-terminal domain AM586_17780 PF03129 Anticodon binding domain AM586_17780 PF02824 TGS domain AM586_17780 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM586_17780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM586_17790 PF01545 Cation efflux family AM586_17795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_17815 PF02824 TGS domain AM586_17815 PF13291 ACT domain AM586_17815 PF04607 Region found in RelA / SpoT proteins AM586_17820 PF01042 Endoribonuclease L-PSP AM586_17830 PF00106 short chain dehydrogenase AM586_17840 PF01979 Amidohydrolase family AM586_17845 PF00375 Sodium:dicarboxylate symporter family AM586_17870 PF01144 Coenzyme A transferase AM586_17875 PF01144 Coenzyme A transferase AM586_17880 PF00072 Response regulator receiver domain AM586_17880 PF00196 Bacterial regulatory proteins, luxR family AM586_17910 PF00990 Diguanylate cyclase, GGDEF domain AM586_17910 PF03707 Bacterial signalling protein N terminal repeat AM586_17910 PF13188 PAS domain AM586_17910 PF00563 EAL domain AM586_17955 PF00768 D-alanyl-D-alanine carboxypeptidase AM586_17960 PF00180 Isocitrate/isopropylmalate dehydrogenase AM586_17965 PF03466 LysR substrate binding domain AM586_17965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_17970 PF01618 MotA/TolQ/ExbB proton channel family AM586_17975 PF13538 UvrD-like helicase C-terminal domain AM586_17980 PF13361 UvrD-like helicase C-terminal domain AM586_17980 PF00580 UvrD/REP helicase N-terminal domain AM586_17980 PF12705 PD-(D/E)XK nuclease superfamily AM586_17985 PF17946 RecC C-terminal domain AM586_17990 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_17990 PF00072 Response regulator receiver domain AM586_17990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_17990 PF00672 HAMP domain AM586_17990 PF00512 His Kinase A (phospho-acceptor) domain AM586_17990 PF01627 Hpt domain AM586_17995 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM586_17995 PF00326 Prolyl oligopeptidase family AM586_18005 PF00196 Bacterial regulatory proteins, luxR family AM586_18005 PF03472 Autoinducer binding domain AM586_18010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_18010 PF00072 Response regulator receiver domain AM586_18010 PF01627 Hpt domain AM586_18010 PF00512 His Kinase A (phospho-acceptor) domain AM586_18025 PF01042 Endoribonuclease L-PSP AM586_18035 PF01433 Peptidase family M1 domain AM586_18040 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM586_18040 PF01266 FAD dependent oxidoreductase AM586_18045 PF01966 HD domain AM586_18055 PF00580 UvrD/REP helicase N-terminal domain AM586_18055 PF13361 UvrD-like helicase C-terminal domain AM586_18065 PF02417 Chromate transporter AM586_18075 PF00756 Putative esterase AM586_18080 PF00011 Hsp20/alpha crystallin family AM586_18085 PF05139 Erythromycin esterase AM586_18085 PF00156 Phosphoribosyl transferase domain AM586_18095 PF00156 Phosphoribosyl transferase domain AM586_18095 PF05139 Erythromycin esterase AM586_18100 PF01799 [2Fe-2S] binding domain AM586_18100 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_18105 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_18110 PF08241 Methyltransferase domain AM586_18115 PF00857 Isochorismatase family AM586_18125 PF00155 Aminotransferase class I and II AM586_18130 PF00512 His Kinase A (phospho-acceptor) domain AM586_18130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_18130 PF16736 Single Cache-like AM586_18130 PF00989 PAS fold AM586_18135 PF00999 Sodium/hydrogen exchanger family AM586_18145 PF00072 Response regulator receiver domain AM586_18145 PF01966 HD domain AM586_18160 PF00398 Ribosomal RNA adenine dimethylase AM586_18195 PF01565 FAD binding domain AM586_18195 PF08031 Berberine and berberine like AM586_18220 PF04972 BON domain AM586_18220 PF00263 Bacterial type II and III secretion system protein AM586_18220 PF13629 Pilus formation protein N terminal region AM586_18250 PF00437 Type II/IV secretion system protein AM586_18280 PF00072 Response regulator receiver domain AM586_18280 PF00196 Bacterial regulatory proteins, luxR family AM586_18285 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM586_18285 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM586_18300 PF13193 AMP-binding enzyme C-terminal domain AM586_18300 PF00501 AMP-binding enzyme AM586_18340 PF13247 4Fe-4S dicluster domain AM586_18345 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM586_18345 PF01568 Molydopterin dinucleotide binding domain AM586_18345 PF00384 Molybdopterin oxidoreductase AM586_18345 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM586_18345 PF12838 4Fe-4S dicluster domain AM586_18360 PF02322 Cytochrome bd terminal oxidase subunit II AM586_18365 PF01654 Cytochrome bd terminal oxidase subunit I AM586_18370 PF13545 Crp-like helix-turn-helix domain AM586_18370 PF00027 Cyclic nucleotide-binding domain AM586_18390 PF00512 His Kinase A (phospho-acceptor) domain AM586_18390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_18390 PF00672 HAMP domain AM586_18395 PF00072 Response regulator receiver domain AM586_18395 PF00486 Transcriptional regulatory protein, C terminal AM586_18400 PF00576 HIUase/Transthyretin family AM586_18410 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AM586_18410 PF12801 4Fe-4S binding domain AM586_18410 PF13746 4Fe-4S dicluster domain AM586_18415 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AM586_18415 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_18430 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM586_18445 PF00403 Heavy-metal-associated domain AM586_18455 PF04055 Radical SAM superfamily AM586_18455 PF06969 HemN C-terminal domain AM586_18460 PF08447 PAS fold AM586_18460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_18465 PF00501 AMP-binding enzyme AM586_18465 PF00668 Condensation domain AM586_18465 PF00550 Phosphopantetheine attachment site AM586_18465 PF00975 Thioesterase domain AM586_18465 PF13193 AMP-binding enzyme C-terminal domain AM586_18480 PF00356 Bacterial regulatory proteins, lacI family AM586_18515 PF00990 Diguanylate cyclase, GGDEF domain AM586_18515 PF00563 EAL domain AM586_18515 PF03707 Bacterial signalling protein N terminal repeat AM586_18520 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM586_18520 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AM586_18525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_18525 PF00512 His Kinase A (phospho-acceptor) domain AM586_18525 PF00672 HAMP domain AM586_18530 PF02321 Outer membrane efflux protein AM586_18535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_18540 PF03707 Bacterial signalling protein N terminal repeat AM586_18540 PF00990 Diguanylate cyclase, GGDEF domain AM586_18540 PF00563 EAL domain AM586_18545 PF00929 Exonuclease AM586_18545 PF08411 Exonuclease C-terminal AM586_18555 PF10011 Predicted membrane protein (DUF2254) AM586_18560 PF04191 Phospholipid methyltransferase AM586_18565 PF13649 Methyltransferase domain AM586_18575 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_18575 PF00529 HlyD membrane-fusion protein of T1SS AM586_18580 PF03458 UPF0126 domain AM586_18585 PF03466 LysR substrate binding domain AM586_18585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_18595 PF07729 FCD domain AM586_18595 PF00392 Bacterial regulatory proteins, gntR family AM586_18600 PF00158 Sigma-54 interaction domain AM586_18600 PF02830 V4R domain AM586_18600 PF02954 Bacterial regulatory protein, Fis family AM586_18600 PF06505 Activator of aromatic catabolism AM586_18610 PF02332 Methane/Phenol/Toluene Hydroxylase AM586_18615 PF02406 MmoB/DmpM family AM586_18620 PF02332 Methane/Phenol/Toluene Hydroxylase AM586_18620 PF04945 YHS domain AM586_18625 PF04663 Phenol hydroxylase conserved region AM586_18630 PF00970 Oxidoreductase FAD-binding domain AM586_18630 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_18630 PF00175 Oxidoreductase NAD-binding domain AM586_18635 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_18640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_18645 PF00561 alpha/beta hydrolase fold AM586_18650 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_18655 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM586_18655 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM586_18670 PF07687 Peptidase dimerisation domain AM586_18670 PF01546 Peptidase family M20/M25/M40 AM586_18680 PF03707 Bacterial signalling protein N terminal repeat AM586_18680 PF00990 Diguanylate cyclase, GGDEF domain AM586_18680 PF00563 EAL domain AM586_18685 PF08447 PAS fold AM586_18685 PF00512 His Kinase A (phospho-acceptor) domain AM586_18685 PF13426 PAS domain AM586_18685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_18685 PF13493 Domain of unknown function (DUF4118) AM586_18685 PF00989 PAS fold AM586_18690 PF00072 Response regulator receiver domain AM586_18690 PF00196 Bacterial regulatory proteins, luxR family AM586_18695 PF12706 Beta-lactamase superfamily domain AM586_18700 PF12706 Beta-lactamase superfamily domain AM586_18710 PF03466 LysR substrate binding domain AM586_18710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_18715 PF00155 Aminotransferase class I and II AM586_18715 PF00392 Bacterial regulatory proteins, gntR family AM586_18720 PF00563 EAL domain AM586_18720 PF00990 Diguanylate cyclase, GGDEF domain AM586_18720 PF08447 PAS fold AM586_18720 PF08448 PAS fold AM586_18730 PF13533 Biotin-lipoyl like AM586_18735 PF02321 Outer membrane efflux protein AM586_18750 PF03466 LysR substrate binding domain AM586_18750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_18755 PF01047 MarR family AM586_18770 PF03707 Bacterial signalling protein N terminal repeat AM586_18770 PF00563 EAL domain AM586_18770 PF00990 Diguanylate cyclase, GGDEF domain AM586_18775 PF02627 Carboxymuconolactone decarboxylase family AM586_18795 PF00313 'Cold-shock' DNA-binding domain AM586_18810 PF04717 Type VI secretion system, phage-baseplate injector AM586_18855 PF01066 CDP-alcohol phosphatidyltransferase AM586_18860 PF08459 UvrC Helix-hairpin-helix N-terminal AM586_18860 PF02151 UvrB/uvrC motif AM586_18860 PF01541 GIY-YIG catalytic domain AM586_18865 PF01648 4'-phosphopantetheinyl transferase superfamily AM586_18870 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM586_18875 PF02565 Recombination protein O C terminal AM586_18875 PF11967 Recombination protein O N terminal AM586_18880 PF07650 KH domain AM586_18880 PF01926 50S ribosome-binding GTPase AM586_18895 PF10502 Signal peptidase, peptidase S26 AM586_18900 PF06421 GTP-binding protein LepA C-terminus AM586_18900 PF00009 Elongation factor Tu GTP binding domain AM586_18900 PF03144 Elongation factor Tu domain 2 AM586_18900 PF00679 Elongation factor G C-terminus AM586_18915 PF17820 PDZ domain AM586_18915 PF13180 PDZ domain AM586_18920 PF03872 Anti sigma-E protein RseA, N-terminal domain AM586_18920 PF03873 Anti sigma-E protein RseA, C-terminal domain AM586_18925 PF04542 Sigma-70 region 2 AM586_18925 PF08281 Sigma-70, region 4 AM586_18935 PF02801 Beta-ketoacyl synthase, C-terminal domain AM586_18935 PF00109 Beta-ketoacyl synthase, N-terminal domain AM586_18940 PF00550 Phosphopantetheine attachment site AM586_18950 PF00698 Acyl transferase domain AM586_18955 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM586_18955 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM586_18960 PF02504 Fatty acid synthesis protein AM586_18965 PF01783 Ribosomal L32p protein family AM586_18975 PF02545 Maf-like protein AM586_18980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM586_18985 PF08668 HDOD domain AM586_18985 PF00563 EAL domain AM586_18995 PF00463 Isocitrate lyase family AM586_19015 PF07724 AAA domain (Cdc48 subfamily) AM586_19015 PF00004 ATPase family associated with various cellular activities (AAA) AM586_19015 PF02861 Clp amino terminal domain, pathogenicity island component AM586_19015 PF10431 C-terminal, D2-small domain, of ClpB protein AM586_19015 PF17871 AAA lid domain AM586_19020 PF00654 Voltage gated chloride channel AM586_19030 PF02391 MoaE protein AM586_19045 PF06224 Winged helix DNA-binding domain AM586_19050 PF00149 Calcineurin-like phosphoesterase AM586_19050 PF12320 Type 5 capsule protein repressor C-terminal domain AM586_19065 PF05175 Methyltransferase small domain AM586_19080 PF03880 DbpA RNA binding domain AM586_19080 PF00270 DEAD/DEAH box helicase AM586_19080 PF00271 Helicase conserved C-terminal domain AM586_19100 PF05199 GMC oxidoreductase AM586_19100 PF00732 GMC oxidoreductase AM586_19115 PF01425 Amidase AM586_19125 PF09285 Elongation factor P, C-terminal AM586_19125 PF08207 Elongation factor P (EF-P) KOW-like domain AM586_19125 PF01132 Elongation factor P (EF-P) OB domain AM586_19170 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM586_19175 PF00072 Response regulator receiver domain AM586_19175 PF00990 Diguanylate cyclase, GGDEF domain AM586_19180 PF04055 Radical SAM superfamily AM586_19185 PF10609 NUBPL iron-transfer P-loop NTPase AM586_19190 PF08264 Anticodon-binding domain of tRNA AM586_19190 PF09334 tRNA synthetases class I (M) AM586_19190 PF01588 Putative tRNA binding domain AM586_19210 PF02616 Segregation and condensation protein ScpA AM586_19215 PF02569 Pantoate-beta-alanine ligase AM586_19225 PF08668 HDOD domain AM586_19225 PF00563 EAL domain AM586_19230 PF04344 Chemotaxis phosphatase, CheZ AM586_19235 PF00072 Response regulator receiver domain AM586_19240 PF00072 Response regulator receiver domain AM586_19240 PF01339 CheB methylesterase AM586_19245 PF03975 CheD chemotactic sensory transduction AM586_19250 PF01739 CheR methyltransferase, SAM binding domain AM586_19250 PF03705 CheR methyltransferase, all-alpha domain AM586_19255 PF01584 CheW-like domain AM586_19260 PF01584 CheW-like domain AM586_19260 PF01627 Hpt domain AM586_19260 PF09078 CheY binding AM586_19260 PF02895 Signal transducing histidine kinase, homodimeric domain AM586_19260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19265 PF00072 Response regulator receiver domain AM586_19275 PF00691 OmpA family AM586_19275 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM586_19280 PF01618 MotA/TolQ/ExbB proton channel family AM586_19285 PF13847 Methyltransferase domain AM586_19290 PF05280 Flagellar transcriptional activator (FlhC) AM586_19295 PF05247 Flagellar transcriptional activator (FlhD) AM586_19300 PF04199 Putative cyclase AM586_19305 PF00266 Aminotransferase class-V AM586_19310 PF03301 Tryptophan 2,3-dioxygenase AM586_19320 PF01757 Acyltransferase family AM586_19325 PF00183 Hsp90 protein AM586_19325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19330 PF18029 Glyoxalase-like domain AM586_19335 PF03795 YCII-related domain AM586_19340 PF03795 YCII-related domain AM586_19345 PF08281 Sigma-70, region 4 AM586_19345 PF04542 Sigma-70 region 2 AM586_19350 PF00072 Response regulator receiver domain AM586_19350 PF00486 Transcriptional regulatory protein, C terminal AM586_19355 PF00512 His Kinase A (phospho-acceptor) domain AM586_19355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19355 PF08521 Two-component sensor kinase N-terminal AM586_19360 PF02911 Formyl transferase, C-terminal domain AM586_19360 PF01370 NAD dependent epimerase/dehydratase family AM586_19360 PF00551 Formyl transferase AM586_19375 PF00155 Aminotransferase class I and II AM586_19380 PF00990 Diguanylate cyclase, GGDEF domain AM586_19380 PF00072 Response regulator receiver domain AM586_19385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM586_19385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM586_19390 PF01266 FAD dependent oxidoreductase AM586_19390 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM586_19395 PF02913 FAD linked oxidases, C-terminal domain AM586_19395 PF01565 FAD binding domain AM586_19415 PF14602 Hexapeptide repeat of succinyl-transferase AM586_19415 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM586_19415 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_19420 PF00437 Type II/IV secretion system protein AM586_19425 PF03960 ArsC family AM586_19430 PF07687 Peptidase dimerisation domain AM586_19430 PF01546 Peptidase family M20/M25/M40 AM586_19435 PF05175 Methyltransferase small domain AM586_19445 PF01584 CheW-like domain AM586_19470 PF00486 Transcriptional regulatory protein, C terminal AM586_19470 PF00072 Response regulator receiver domain AM586_19475 PF00672 HAMP domain AM586_19475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19475 PF00512 His Kinase A (phospho-acceptor) domain AM586_19490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19490 PF00512 His Kinase A (phospho-acceptor) domain AM586_19500 PF08448 PAS fold AM586_19500 PF00990 Diguanylate cyclase, GGDEF domain AM586_19500 PF00563 EAL domain AM586_19510 PF02567 Phenazine biosynthesis-like protein AM586_19515 PF01022 Bacterial regulatory protein, arsR family AM586_19525 PF01425 Amidase AM586_19530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_19530 PF03466 LysR substrate binding domain AM586_19535 PF07690 Major Facilitator Superfamily AM586_19540 PF00248 Aldo/keto reductase family AM586_19565 PF03600 Citrate transporter AM586_19570 PF03466 LysR substrate binding domain AM586_19570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_19575 PF00465 Iron-containing alcohol dehydrogenase AM586_19585 PF07660 Secretin and TonB N terminus short domain AM586_19585 PF00593 TonB dependent receptor AM586_19585 PF07715 TonB-dependent Receptor Plug Domain AM586_19590 PF01381 Helix-turn-helix AM586_19590 PF13521 AAA domain AM586_19595 PF04973 Nicotinamide mononucleotide transporter AM586_19600 PF00326 Prolyl oligopeptidase family AM586_19605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_19610 PF00005 ABC transporter AM586_19620 PF02687 FtsX-like permease family AM586_19620 PF12704 MacB-like periplasmic core domain AM586_19620 PF00005 ABC transporter AM586_19625 PF02954 Bacterial regulatory protein, Fis family AM586_19625 PF00072 Response regulator receiver domain AM586_19625 PF00158 Sigma-54 interaction domain AM586_19630 PF00512 His Kinase A (phospho-acceptor) domain AM586_19630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19635 PF10459 Peptidase S46 AM586_19640 PF13593 SBF-like CPA transporter family (DUF4137) AM586_19650 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM586_19650 PF02321 Outer membrane efflux protein AM586_19655 PF00873 AcrB/AcrD/AcrF family AM586_19665 PF13533 Biotin-lipoyl like AM586_19670 PF01343 Peptidase family S49 AM586_19675 PF00474 Sodium:solute symporter family AM586_19690 PF05995 Cysteine dioxygenase type I AM586_19700 PF12843 Putative quorum-sensing-regulated virulence factor AM586_19710 PF02678 Pirin AM586_19710 PF17954 Quercetinase C-terminal cupin domain AM586_19715 PF00486 Transcriptional regulatory protein, C terminal AM586_19715 PF00072 Response regulator receiver domain AM586_19725 PF00535 Glycosyl transferase family 2 AM586_19745 PF00990 Diguanylate cyclase, GGDEF domain AM586_19745 PF00563 EAL domain AM586_19745 PF03707 Bacterial signalling protein N terminal repeat AM586_19760 PF00512 His Kinase A (phospho-acceptor) domain AM586_19760 PF18698 Histidine kinase sensor domain AM586_19760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19760 PF00672 HAMP domain AM586_19765 PF00925 GTP cyclohydrolase II AM586_19785 PF00027 Cyclic nucleotide-binding domain AM586_19785 PF00520 Ion transport protein AM586_19790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_19795 PF03358 NADPH-dependent FMN reductase AM586_19820 PF02542 YgbB family AM586_19825 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM586_19835 PF00293 NUDIX domain AM586_19845 PF00361 Proton-conducting membrane transporter AM586_19850 PF00361 Proton-conducting membrane transporter AM586_19850 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus AM586_19855 PF00361 Proton-conducting membrane transporter AM586_19855 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM586_19860 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM586_19865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM586_19870 PF12838 4Fe-4S dicluster domain AM586_19875 PF00146 NADH dehydrogenase AM586_19880 PF00384 Molybdopterin oxidoreductase AM586_19880 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal AM586_19880 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM586_19885 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM586_19885 PF10531 SLBB domain AM586_19885 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM586_19895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM586_19900 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM586_19910 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM586_19920 PF03840 Preprotein translocase SecG subunit AM586_19925 PF00121 Triosephosphate isomerase AM586_19930 PF08240 Alcohol dehydrogenase GroES-like domain AM586_19930 PF00107 Zinc-binding dehydrogenase AM586_19955 PF05193 Peptidase M16 inactive domain AM586_19955 PF00675 Insulinase (Peptidase family M16) AM586_19970 PF00512 His Kinase A (phospho-acceptor) domain AM586_19970 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_19970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19970 PF00072 Response regulator receiver domain AM586_19975 PF00672 HAMP domain AM586_19975 PF01627 Hpt domain AM586_19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_19975 PF00512 His Kinase A (phospho-acceptor) domain AM586_19975 PF00072 Response regulator receiver domain AM586_19975 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_19985 PF13581 Histidine kinase-like ATPase domain AM586_19990 PF01740 STAS domain AM586_19995 PF08678 Rsbr N terminal AM586_19995 PF01740 STAS domain AM586_20015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM586_20015 PF03725 3' exoribonuclease family, domain 2 AM586_20015 PF00575 S1 RNA binding domain AM586_20015 PF01138 3' exoribonuclease family, domain 1 AM586_20015 PF00013 KH domain AM586_20020 PF00312 Ribosomal protein S15 AM586_20055 PF00550 Phosphopantetheine attachment site AM586_20060 PF02817 e3 binding domain AM586_20060 PF00364 Biotin-requiring enzyme AM586_20060 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM586_20065 PF02779 Transketolase, pyrimidine binding domain AM586_20065 PF00364 Biotin-requiring enzyme AM586_20065 PF02780 Transketolase, C-terminal domain AM586_20070 PF00676 Dehydrogenase E1 component AM586_20075 PF13193 AMP-binding enzyme C-terminal domain AM586_20075 PF00501 AMP-binding enzyme AM586_20085 PF01066 CDP-alcohol phosphatidyltransferase AM586_20100 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM586_20100 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM586_20105 PF10369 Small subunit of acetolactate synthase AM586_20110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM586_20110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM586_20110 PF00205 Thiamine pyrophosphate enzyme, central domain AM586_20115 PF00043 Glutathione S-transferase, C-terminal domain AM586_20115 PF13417 Glutathione S-transferase, N-terminal domain AM586_20145 PF01212 Beta-eliminating lyase AM586_20155 PF04384 Iron-sulphur cluster assembly AM586_20160 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_20165 PF00012 Hsp70 protein AM586_20170 PF07743 HSCB C-terminal oligomerisation domain AM586_20175 PF01521 Iron-sulphur cluster biosynthesis AM586_20180 PF01592 NifU-like N terminal domain AM586_20185 PF00266 Aminotransferase class-V AM586_20190 PF02082 Transcriptional regulator AM586_20195 PF03167 Uracil DNA glycosylase superfamily AM586_20200 PF00571 CBS domain AM586_20210 PF14497 Glutathione S-transferase, C-terminal domain AM586_20210 PF02798 Glutathione S-transferase, N-terminal domain AM586_20220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_20220 PF03466 LysR substrate binding domain AM586_20230 PF00023 Ankyrin repeat AM586_20230 PF12796 Ankyrin repeats (3 copies) AM586_20235 PF00990 Diguanylate cyclase, GGDEF domain AM586_20240 PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family AM586_20260 PF03358 NADPH-dependent FMN reductase AM586_20265 PF02321 Outer membrane efflux protein AM586_20270 PF13533 Biotin-lipoyl like AM586_20290 PF04650 YSIRK type signal peptide AM586_20295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_20295 PF13426 PAS domain AM586_20295 PF00072 Response regulator receiver domain AM586_20300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_20300 PF08446 PAS fold AM586_20300 PF01590 GAF domain AM586_20300 PF00360 Phytochrome region AM586_20300 PF00512 His Kinase A (phospho-acceptor) domain AM586_20305 PF00072 Response regulator receiver domain AM586_20310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_20310 PF13426 PAS domain AM586_20310 PF00072 Response regulator receiver domain AM586_20320 PF07690 Major Facilitator Superfamily AM586_20325 PF04235 Protein of unknown function (DUF418) AM586_20345 PF01370 NAD dependent epimerase/dehydratase family AM586_20345 PF02222 ATP-grasp domain AM586_20370 PF00155 Aminotransferase class I and II AM586_20385 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_20390 PF01914 MarC family integral membrane protein AM586_20395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_20395 PF03466 LysR substrate binding domain AM586_20400 PF01266 FAD dependent oxidoreductase AM586_20405 PF00083 Sugar (and other) transporter AM586_20410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_20410 PF02203 Tar ligand binding domain homologue AM586_20410 PF00672 HAMP domain AM586_20420 PF05199 GMC oxidoreductase AM586_20420 PF00732 GMC oxidoreductase AM586_20425 PF00034 Cytochrome c AM586_20430 PF00156 Phosphoribosyl transferase domain AM586_20435 PF00709 Adenylosuccinate synthetase AM586_20440 PF13393 Histidyl-tRNA synthetase AM586_20445 PF01145 SPFH domain / Band 7 family AM586_20450 PF12221 Bacterial membrane protein N terminal AM586_20450 PF01145 SPFH domain / Band 7 family AM586_20460 PF17209 Hfq protein AM586_20465 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM586_20465 PF01926 50S ribosome-binding GTPase AM586_20470 PF13360 PQQ-like domain AM586_20480 PF13393 Histidyl-tRNA synthetase AM586_20480 PF03129 Anticodon binding domain AM586_20485 PF04551 GcpE protein AM586_20490 PF13464 Domain of unknown function (DUF4115) AM586_20500 PF04055 Radical SAM superfamily AM586_20505 PF00334 Nucleoside diphosphate kinase AM586_20510 PF01027 Inhibitor of apoptosis-promoting Bax1 AM586_20520 PF07715 TonB-dependent Receptor Plug Domain AM586_20520 PF00593 TonB dependent receptor AM586_20530 PF05958 tRNA (Uracil-5-)-methyltransferase AM586_20535 PF04539 Sigma-70 region 3 AM586_20535 PF04542 Sigma-70 region 2 AM586_20535 PF00140 Sigma-70 factor, region 1.2 AM586_20535 PF04545 Sigma-70, region 4 AM586_20540 PF01551 Peptidase family M23 AM586_20540 PF01476 LysM domain AM586_20550 PF01975 Survival protein SurE AM586_20565 PF08240 Alcohol dehydrogenase GroES-like domain AM586_20565 PF00550 Phosphopantetheine attachment site AM586_20565 PF00107 Zinc-binding dehydrogenase AM586_20565 PF02801 Beta-ketoacyl synthase, C-terminal domain AM586_20565 PF00109 Beta-ketoacyl synthase, N-terminal domain AM586_20565 PF16197 Ketoacyl-synthetase C-terminal extension AM586_20565 PF00698 Acyl transferase domain AM586_20565 PF14765 Polyketide synthase dehydratase AM586_20565 PF08659 KR domain AM586_20575 PF01235 Sodium:alanine symporter family AM586_20585 PF13307 Helicase C-terminal domain AM586_20585 PF04851 Type III restriction enzyme, res subunit AM586_20605 PF03969 AFG1-like ATPase AM586_20610 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_20610 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM586_20620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM586_20620 PF00364 Biotin-requiring enzyme AM586_20620 PF02817 e3 binding domain AM586_20625 PF16870 2-oxoglutarate dehydrogenase C-terminal AM586_20625 PF00676 Dehydrogenase E1 component AM586_20625 PF02779 Transketolase, pyrimidine binding domain AM586_20625 PF16078 2-oxoglutarate dehydrogenase N-terminus AM586_20650 PF00667 FAD binding domain AM586_20650 PF00175 Oxidoreductase NAD-binding domain AM586_20650 PF00258 Flavodoxin AM586_20655 PF03707 Bacterial signalling protein N terminal repeat AM586_20655 PF00990 Diguanylate cyclase, GGDEF domain AM586_20655 PF00563 EAL domain AM586_20675 PF00135 Carboxylesterase family AM586_20685 PF00072 Response regulator receiver domain AM586_20685 PF00486 Transcriptional regulatory protein, C terminal AM586_20705 PF00654 Voltage gated chloride channel AM586_20725 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM586_20730 PF00989 PAS fold AM586_20735 PF00501 AMP-binding enzyme AM586_20735 PF13193 AMP-binding enzyme C-terminal domain AM586_20740 PF13411 MerR HTH family regulatory protein AM586_20740 PF02607 B12 binding domain AM586_20745 PF00990 Diguanylate cyclase, GGDEF domain AM586_20745 PF03707 Bacterial signalling protein N terminal repeat AM586_20745 PF00563 EAL domain AM586_20755 PF00561 alpha/beta hydrolase fold AM586_20770 PF01272 Transcription elongation factor, GreA/GreB, C-term AM586_20770 PF14760 Rnk N-terminus AM586_20775 PF00285 Citrate synthase, C-terminal domain AM586_20780 PF03937 Flavinator of succinate dehydrogenase AM586_20785 PF13085 2Fe-2S iron-sulfur cluster binding domain AM586_20790 PF02910 Fumarate reductase flavoprotein C-term AM586_20790 PF00890 FAD binding domain AM586_20795 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM586_20805 PF07702 UTRA domain AM586_20805 PF00392 Bacterial regulatory proteins, gntR family AM586_20810 PF00056 lactate/malate dehydrogenase, NAD binding domain AM586_20810 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM586_20825 PF00694 Aconitase C-terminal domain AM586_20825 PF00330 Aconitase family (aconitate hydratase) AM586_20830 PF00072 Response regulator receiver domain AM586_20830 PF00512 His Kinase A (phospho-acceptor) domain AM586_20830 PF01627 Hpt domain AM586_20830 PF00989 PAS fold AM586_20830 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_20830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_20835 PF18331 PKHD-type hydroxylase C-terminal domain AM586_20835 PF13640 2OG-Fe(II) oxygenase superfamily AM586_20840 PF00593 TonB dependent receptor AM586_20840 PF07715 TonB-dependent Receptor Plug Domain AM586_20850 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_20865 PF00246 Zinc carboxypeptidase AM586_20865 PF18027 Cytosolic carboxypeptidase N-terminal domain AM586_20900 PF00004 ATPase family associated with various cellular activities (AAA) AM586_20900 PF17862 AAA+ lid domain AM586_20900 PF01434 Peptidase family M41 AM586_20930 PF03466 LysR substrate binding domain AM586_20930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_20935 PF00456 Transketolase, thiamine diphosphate binding domain AM586_20940 PF02779 Transketolase, pyrimidine binding domain AM586_20940 PF02780 Transketolase, C-terminal domain AM586_20960 PF07690 Major Facilitator Superfamily AM586_20970 PF08402 TOBE domain AM586_20970 PF00005 ABC transporter AM586_20975 PF00528 Binding-protein-dependent transport system inner membrane component AM586_20990 PF13609 Gram-negative porin AM586_20995 PF00072 Response regulator receiver domain AM586_20995 PF00486 Transcriptional regulatory protein, C terminal AM586_21000 PF08521 Two-component sensor kinase N-terminal AM586_21000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21000 PF00512 His Kinase A (phospho-acceptor) domain AM586_21010 PF01842 ACT domain AM586_21010 PF03447 Homoserine dehydrogenase, NAD binding domain AM586_21010 PF00742 Homoserine dehydrogenase AM586_21015 PF00155 Aminotransferase class I and II AM586_21020 PF04430 Protein of unknown function (DUF498/DUF598) AM586_21025 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM586_21035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM586_21040 PF00535 Glycosyl transferase family 2 AM586_21045 PF01370 NAD dependent epimerase/dehydratase family AM586_21045 PF02911 Formyl transferase, C-terminal domain AM586_21045 PF00551 Formyl transferase AM586_21050 PF01370 NAD dependent epimerase/dehydratase family AM586_21050 PF02911 Formyl transferase, C-terminal domain AM586_21050 PF00551 Formyl transferase AM586_21055 PF01522 Polysaccharide deacetylase AM586_21060 PF00578 AhpC/TSA family AM586_21065 PF13638 PIN domain AM586_21065 PF02562 PhoH-like protein AM586_21070 PF00710 Asparaginase, N-terminal AM586_21070 PF17763 Glutaminase/Asparaginase C-terminal domain AM586_21075 PF03714 Bacterial pullanase-associated domain AM586_21075 PF11852 Domain of unknown function (DUF3372) AM586_21075 PF18494 Pullulanase Ins domain AM586_21075 PF17967 Pullulanase N2 domain AM586_21075 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM586_21080 PF01384 Phosphate transporter family AM586_21090 PF03796 DnaB-like helicase C terminal domain AM586_21090 PF00772 DnaB-like helicase N terminal domain AM586_21095 PF01281 Ribosomal protein L9, N-terminal domain AM586_21095 PF03948 Ribosomal protein L9, C-terminal domain AM586_21100 PF01084 Ribosomal protein S18 AM586_21110 PF01250 Ribosomal protein S6 AM586_21115 PF00717 Peptidase S24-like AM586_21115 PF01726 LexA DNA binding domain AM586_21130 PF01053 Cys/Met metabolism PLP-dependent enzyme AM586_21135 PF00156 Phosphoribosyl transferase domain AM586_21140 PF02674 Colicin V production protein AM586_21150 PF02875 Mur ligase family, glutamate ligase domain AM586_21150 PF08245 Mur ligase middle domain AM586_21155 PF01039 Carboxyl transferase domain AM586_21155 PF17848 Acetyl-coA carboxylase zinc finger domain AM586_21160 PF00290 Tryptophan synthase alpha chain AM586_21165 PF00291 Pyridoxal-phosphate dependent enzyme AM586_21170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM586_21175 PF01416 tRNA pseudouridine synthase AM586_21185 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM586_21185 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM586_21195 PF00694 Aconitase C-terminal domain AM586_21200 PF00330 Aconitase family (aconitate hydratase) AM586_21205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21205 PF01627 Hpt domain AM586_21205 PF02895 Signal transducing histidine kinase, homodimeric domain AM586_21205 PF07194 P2 response regulator binding domain AM586_21205 PF01584 CheW-like domain AM586_21210 PF04344 Chemotaxis phosphatase, CheZ AM586_21220 PF00196 Bacterial regulatory proteins, luxR family AM586_21220 PF00072 Response regulator receiver domain AM586_21225 PF13545 Crp-like helix-turn-helix domain AM586_21225 PF00027 Cyclic nucleotide-binding domain AM586_21240 PF00271 Helicase conserved C-terminal domain AM586_21240 PF08494 DEAD/H associated AM586_21240 PF00270 DEAD/DEAH box helicase AM586_21245 PF04675 DNA ligase N terminus AM586_21245 PF01068 ATP dependent DNA ligase domain AM586_21245 PF04679 ATP dependent DNA ligase C terminal region AM586_21250 PF04675 DNA ligase N terminus AM586_21250 PF01068 ATP dependent DNA ligase domain AM586_21250 PF04679 ATP dependent DNA ligase C terminal region AM586_21255 PF00271 Helicase conserved C-terminal domain AM586_21255 PF09382 RQC domain AM586_21255 PF16124 RecQ zinc-binding AM586_21255 PF00570 HRDC domain AM586_21255 PF00270 DEAD/DEAH box helicase AM586_21260 PF05656 Protein of unknown function (DUF805) AM586_21265 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_21265 PF13192 Thioredoxin domain AM586_21270 PF00578 AhpC/TSA family AM586_21270 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM586_21275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_21275 PF00072 Response regulator receiver domain AM586_21275 PF01627 Hpt domain AM586_21275 PF00672 HAMP domain AM586_21275 PF00512 His Kinase A (phospho-acceptor) domain AM586_21275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21280 PF01339 CheB methylesterase AM586_21285 PF03705 CheR methyltransferase, all-alpha domain AM586_21285 PF01739 CheR methyltransferase, SAM binding domain AM586_21290 PF01627 Hpt domain AM586_21290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21290 PF00672 HAMP domain AM586_21290 PF00072 Response regulator receiver domain AM586_21290 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_21290 PF00512 His Kinase A (phospho-acceptor) domain AM586_21295 PF17755 UvrA DNA-binding domain AM586_21305 PF03033 Glycosyltransferase family 28 N-terminal domain AM586_21305 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase AM586_21310 PF00005 ABC transporter AM586_21310 PF12848 ABC transporter AM586_21345 PF02608 ABC transporter substrate-binding protein PnrA-like AM586_21350 PF14437 MafB19-like deaminase AM586_21350 PF01171 PP-loop family AM586_21350 PF11734 TilS substrate C-terminal domain AM586_21365 PF00005 ABC transporter AM586_21365 PF00664 ABC transporter transmembrane region AM586_21370 PF08443 RimK-like ATP-grasp domain AM586_21370 PF02875 Mur ligase family, glutamate ligase domain AM586_21370 PF08245 Mur ligase middle domain AM586_21405 PF05192 MutS domain III AM586_21405 PF05188 MutS domain II AM586_21405 PF01624 MutS domain I AM586_21405 PF05190 MutS family domain IV AM586_21405 PF00488 MutS domain V AM586_21415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_21420 PF08007 Cupin superfamily protein AM586_21430 PF06804 NlpB/DapX lipoprotein AM586_21435 PF00701 Dihydrodipicolinate synthetase family AM586_21445 PF00579 tRNA synthetases class I (W and Y) AM586_21450 PF02163 Peptidase family M50 AM586_21455 PF01300 Telomere recombination AM586_21460 PF01435 Peptidase family M48 AM586_21465 PF02811 PHP domain AM586_21470 PF00561 alpha/beta hydrolase fold AM586_21475 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_21480 PF01430 Hsp33 protein AM586_21485 PF03061 Thioesterase superfamily AM586_21510 PF04977 Septum formation initiator AM586_21515 PF00113 Enolase, C-terminal TIM barrel domain AM586_21515 PF03952 Enolase, N-terminal domain AM586_21520 PF00793 DAHP synthetase I family AM586_21525 PF06418 CTP synthase N-terminus AM586_21525 PF00117 Glutamine amidotransferase class-I AM586_21530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_21530 PF00672 HAMP domain AM586_21530 PF02203 Tar ligand binding domain homologue AM586_21545 PF01546 Peptidase family M20/M25/M40 AM586_21545 PF07687 Peptidase dimerisation domain AM586_21550 PF00672 HAMP domain AM586_21550 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_21550 PF02203 Tar ligand binding domain homologue AM586_21555 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM586_21555 PF02811 PHP domain AM586_21555 PF14579 Helix-hairpin-helix motif AM586_21555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM586_21565 PF00392 Bacterial regulatory proteins, gntR family AM586_21565 PF07729 FCD domain AM586_21570 PF02652 L-lactate permease AM586_21575 PF01070 FMN-dependent dehydrogenase AM586_21600 PF01594 AI-2E family transporter AM586_21610 PF00593 TonB dependent receptor AM586_21610 PF07715 TonB-dependent Receptor Plug Domain AM586_21615 PF00535 Glycosyl transferase family 2 AM586_21635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21635 PF08521 Two-component sensor kinase N-terminal AM586_21635 PF00512 His Kinase A (phospho-acceptor) domain AM586_21640 PF00072 Response regulator receiver domain AM586_21640 PF00486 Transcriptional regulatory protein, C terminal AM586_21645 PF13180 PDZ domain AM586_21650 PF00011 Hsp20/alpha crystallin family AM586_21680 PF13609 Gram-negative porin AM586_21690 PF00528 Binding-protein-dependent transport system inner membrane component AM586_21695 PF00005 ABC transporter AM586_21700 PF00072 Response regulator receiver domain AM586_21700 PF00486 Transcriptional regulatory protein, C terminal AM586_21705 PF08521 Two-component sensor kinase N-terminal AM586_21705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_21705 PF00512 His Kinase A (phospho-acceptor) domain AM586_21710 PF07702 UTRA domain AM586_21710 PF00392 Bacterial regulatory proteins, gntR family AM586_21715 PF07690 Major Facilitator Superfamily AM586_21725 PF04909 Amidohydrolase AM586_21740 PF00155 Aminotransferase class I and II AM586_21740 PF00392 Bacterial regulatory proteins, gntR family AM586_21765 PF00593 TonB dependent receptor AM586_21765 PF07715 TonB-dependent Receptor Plug Domain AM586_21785 PF00012 Hsp70 protein AM586_21790 PF00012 Hsp70 protein AM586_21800 PF00248 Aldo/keto reductase family AM586_21805 PF04993 TfoX N-terminal domain AM586_21810 PF02798 Glutathione S-transferase, N-terminal domain AM586_21830 PF13439 Glycosyltransferase Family 4 AM586_21830 PF00534 Glycosyl transferases group 1 AM586_21885 PF00271 Helicase conserved C-terminal domain AM586_21885 PF00270 DEAD/DEAH box helicase AM586_21885 PF11898 Domain of unknown function (DUF3418) AM586_21885 PF04408 Helicase associated domain (HA2) AM586_21885 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM586_21890 PF00696 Amino acid kinase family AM586_21890 PF00583 Acetyltransferase (GNAT) family AM586_21895 PF04362 Bacterial Fe(2+) trafficking AM586_21920 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM586_21930 PF00082 Subtilase family AM586_21950 PF01081 KDPG and KHG aldolase AM586_21955 PF00920 Dehydratase family AM586_21960 PF00342 Phosphoglucose isomerase AM586_21965 PF08450 SMP-30/Gluconolactonase/LRE-like region AM586_21975 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM586_21975 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM586_21980 PF01418 Helix-turn-helix domain, rpiR family AM586_21980 PF01380 SIS domain AM586_21995 PF06965 Na+/H+ antiporter 1 AM586_22000 PF13185 GAF domain AM586_22005 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM586_22010 PF03060 Nitronate monooxygenase AM586_22015 PF06779 Uncharacterised MFS-type transporter YbfB AM586_22020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_22020 PF03466 LysR substrate binding domain AM586_22030 PF00440 Bacterial regulatory proteins, tetR family AM586_22030 PF08361 MAATS-type transcriptional repressor, C-terminal region AM586_22035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_22035 PF00529 HlyD membrane-fusion protein of T1SS AM586_22040 PF00873 AcrB/AcrD/AcrF family AM586_22045 PF02321 Outer membrane efflux protein AM586_22050 PF04389 Peptidase family M28 AM586_22085 PF00672 HAMP domain AM586_22085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_22085 PF00512 His Kinase A (phospho-acceptor) domain AM586_22090 PF00486 Transcriptional regulatory protein, C terminal AM586_22090 PF00072 Response regulator receiver domain AM586_22095 PF00155 Aminotransferase class I and II AM586_22105 PF06969 HemN C-terminal domain AM586_22105 PF04055 Radical SAM superfamily AM586_22110 PF01725 Ham1 family AM586_22115 PF01627 Hpt domain AM586_22115 PF00072 Response regulator receiver domain AM586_22115 PF00512 His Kinase A (phospho-acceptor) domain AM586_22115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_22115 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_22115 PF00989 PAS fold AM586_22120 PF12697 Alpha/beta hydrolase family AM586_22130 PF04616 Glycosyl hydrolases family 43 AM586_22135 PF01138 3' exoribonuclease family, domain 1 AM586_22135 PF03725 3' exoribonuclease family, domain 2 AM586_22145 PF00805 Pentapeptide repeats (8 copies) AM586_22145 PF00069 Protein kinase domain AM586_22150 PF03755 YicC-like family, N-terminal region AM586_22150 PF08340 Domain of unknown function (DUF1732) AM586_22155 PF00625 Guanylate kinase AM586_22160 PF01192 RNA polymerase Rpb6 AM586_22165 PF13291 ACT domain AM586_22165 PF02824 TGS domain AM586_22165 PF04607 Region found in RelA / SpoT proteins AM586_22180 PF02698 DUF218 domain AM586_22185 PF03707 Bacterial signalling protein N terminal repeat AM586_22185 PF00990 Diguanylate cyclase, GGDEF domain AM586_22185 PF00563 EAL domain AM586_22195 PF01126 Heme oxygenase AM586_22200 PF01272 Transcription elongation factor, GreA/GreB, C-term AM586_22200 PF03449 Transcription elongation factor, N-terminal AM586_22210 PF05231 MASE1 AM586_22210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_22210 PF07730 Histidine kinase AM586_22215 PF00196 Bacterial regulatory proteins, luxR family AM586_22215 PF00072 Response regulator receiver domain AM586_22230 PF00990 Diguanylate cyclase, GGDEF domain AM586_22230 PF00072 Response regulator receiver domain AM586_22235 PF00535 Glycosyl transferase family 2 AM586_22240 PF00700 Bacterial flagellin C-terminal helical region AM586_22240 PF00669 Bacterial flagellin N-terminal helical region AM586_22250 PF02465 Flagellar hook-associated protein 2 N-terminus AM586_22250 PF07195 Flagellar hook-associated protein 2 C-terminus AM586_22255 PF02561 Flagellar protein FliS AM586_22260 PF05400 Flagellar protein FliT AM586_22270 PF01312 FlhB HrpN YscU SpaS Family AM586_22275 PF07238 PilZ domain AM586_22275 PF07317 Flagellar regulator YcgR AM586_22280 PF04616 Glycosyl hydrolases family 43 AM586_22280 PF16369 C-terminal lipocalin-like domain AM586_22285 PF02049 Flagellar hook-basal body complex protein FliE AM586_22290 PF08345 Flagellar M-ring protein C-terminal AM586_22290 PF01514 Secretory protein of YscJ/FliF family AM586_22295 PF01706 FliG C-terminal domain AM586_22295 PF14842 FliG N-terminal domain AM586_22295 PF14841 FliG middle domain AM586_22300 PF02108 Flagellar assembly protein FliH AM586_22305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM586_22305 PF18269 T3SS EscN ATPase C-terminal domain AM586_22315 PF02120 Flagellar hook-length control protein FliK AM586_22320 PF03748 Flagellar basal body-associated protein FliL AM586_22325 PF02154 Flagellar motor switch protein FliM AM586_22325 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM586_22330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM586_22335 PF04347 Flagellar biosynthesis protein, FliO AM586_22340 PF00813 FliP family AM586_22345 PF01313 Bacterial export proteins, family 3 AM586_22350 PF01311 Bacterial export proteins, family 1 AM586_22355 PF03703 Bacterial PH domain AM586_22370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_22370 PF00460 Flagella basal body rod protein AM586_22375 PF10135 Rod binding protein AM586_22375 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM586_22380 PF02119 Flagellar P-ring protein AM586_22385 PF02107 Flagellar L-ring protein AM586_22390 PF00460 Flagella basal body rod protein AM586_22390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_22395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_22395 PF00460 Flagella basal body rod protein AM586_22400 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_22400 PF00460 Flagella basal body rod protein AM586_22400 PF07559 Flagellar basal body protein FlaE AM586_22405 PF13860 FlgD Ig-like domain AM586_22405 PF03963 Flagellar hook capping protein - N-terminal region AM586_22405 PF13861 FlgD Tudor-like domain AM586_22410 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM586_22410 PF00460 Flagella basal body rod protein AM586_22415 PF00460 Flagella basal body rod protein AM586_22435 PF03707 Bacterial signalling protein N terminal repeat AM586_22435 PF00563 EAL domain AM586_22435 PF00990 Diguanylate cyclase, GGDEF domain AM586_22440 PF14521 Lysine-specific metallo-endopeptidase AM586_22445 PF14521 Lysine-specific metallo-endopeptidase AM586_22455 PF01339 CheB methylesterase AM586_22455 PF01739 CheR methyltransferase, SAM binding domain AM586_22455 PF03705 CheR methyltransferase, all-alpha domain AM586_22455 PF08448 PAS fold AM586_22460 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM586_22460 PF00691 OmpA family AM586_22465 PF01618 MotA/TolQ/ExbB proton channel family AM586_22470 PF04539 Sigma-70 region 3 AM586_22470 PF04545 Sigma-70, region 4 AM586_22470 PF04542 Sigma-70 region 2 AM586_22480 PF00448 SRP54-type protein, GTPase domain AM586_22490 PF00953 Glycosyl transferase family 4 AM586_22495 PF00771 FHIPEP family AM586_22500 PF01312 FlhB HrpN YscU SpaS Family AM586_22505 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM586_22510 PF00483 Nucleotidyl transferase AM586_22515 PF04321 RmlD substrate binding domain AM586_22520 PF16363 GDP-mannose 4,6 dehydratase AM586_22535 PF02253 Phospholipase A1 AM586_22540 PF00849 RNA pseudouridylate synthase AM586_22540 PF01479 S4 domain AM586_22550 PF06965 Na+/H+ antiporter 1 AM586_22550 PF01343 Peptidase family S49 AM586_22560 PF13419 Haloacid dehalogenase-like hydrolase AM586_22565 PF01479 S4 domain AM586_22565 PF00849 RNA pseudouridylate synthase AM586_22570 PF10150 Ribonuclease E/G family AM586_22570 PF12111 Polyribonucleotide phosphorylase C terminal AM586_22570 PF00575 S1 RNA binding domain AM586_22580 PF04055 Radical SAM superfamily AM586_22580 PF06463 Molybdenum Cofactor Synthesis C AM586_22585 PF03453 MoeA N-terminal region (domain I and II) AM586_22585 PF00994 Probable molybdopterin binding domain AM586_22585 PF03454 MoeA C-terminal region (domain IV) AM586_22590 PF02646 RmuC family AM586_22595 PF01152 Bacterial-like globin AM586_22610 PF06798 PrkA serine protein kinase C-terminal domain AM586_22610 PF08298 PrkA AAA domain AM586_22615 PF04285 Protein of unknown function (DUF444) AM586_22620 PF04293 SpoVR like protein AM586_22625 PF01618 MotA/TolQ/ExbB proton channel family AM586_22630 PF02472 Biopolymer transport protein ExbD/TolR AM586_22645 PF06574 FAD synthetase AM586_22645 PF01687 Riboflavin kinase AM586_22650 PF08264 Anticodon-binding domain of tRNA AM586_22650 PF00133 tRNA synthetases class I (I, L, M and V) AM586_22650 PF06827 Zinc finger found in FPG and IleRS AM586_22655 PF01252 Signal peptidase (SPase) II AM586_22660 PF02441 Flavoprotein AM586_22660 PF04127 DNA / pantothenate metabolism flavoprotein AM586_22665 PF00692 dUTPase AM586_22680 PF00730 HhH-GPD superfamily base excision DNA repair protein AM586_22680 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain AM586_22705 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM586_22710 PF04377 Arginine-tRNA-protein transferase, C terminus AM586_22710 PF04376 Arginine-tRNA-protein transferase, N terminus AM586_22715 PF01180 Dihydroorotate dehydrogenase AM586_22720 PF00248 Aldo/keto reductase family AM586_22725 PF03466 LysR substrate binding domain AM586_22725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_22730 PF00005 ABC transporter AM586_22730 PF12857 TOBE-like domain AM586_22730 PF17850 CysA C-terminal regulatory domain AM586_22735 PF00528 Binding-protein-dependent transport system inner membrane component AM586_22740 PF00528 Binding-protein-dependent transport system inner membrane component AM586_22745 PF01925 Sulfite exporter TauE/SafE AM586_22750 PF00578 AhpC/TSA family AM586_22750 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM586_22755 PF01219 Prokaryotic diacylglycerol kinase AM586_22765 PF00768 D-alanyl-D-alanine carboxypeptidase AM586_22770 PF00881 Nitroreductase family AM586_22780 PF09361 Phasin protein AM586_22785 PF00005 ABC transporter AM586_22790 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_22790 PF00005 ABC transporter AM586_22795 PF02653 Branched-chain amino acid transport system / permease component AM586_22795 PF11862 Domain of unknown function (DUF3382) AM586_22800 PF02653 Branched-chain amino acid transport system / permease component AM586_22805 PF00156 Phosphoribosyl transferase domain AM586_22810 PF02401 LytB protein AM586_22815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_22820 PF04002 RadC-like JAB domain AM586_22830 PF00830 Ribosomal L28 family AM586_22835 PF00471 Ribosomal protein L33 AM586_22860 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM586_22860 PF12795 Mechanosensitive ion channel porin domain AM586_22860 PF00924 Mechanosensitive ion channel AM586_22865 PF01029 NusB family AM586_22865 PF01189 16S rRNA methyltransferase RsmB/F AM586_22870 PF00551 Formyl transferase AM586_22890 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM586_22890 PF00437 Type II/IV secretion system protein AM586_22915 PF04717 Type VI secretion system, phage-baseplate injector AM586_22925 PF02203 Tar ligand binding domain homologue AM586_22925 PF00672 HAMP domain AM586_22925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_22935 PF00920 Dehydratase family AM586_22950 PF09186 Domain of unknown function (DUF1949) AM586_22950 PF01205 Uncharacterized protein family UPF0029 AM586_22960 PF07690 Major Facilitator Superfamily AM586_22985 PF00672 HAMP domain AM586_22985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_22985 PF02203 Tar ligand binding domain homologue AM586_22995 PF00005 ABC transporter AM586_23000 PF00528 Binding-protein-dependent transport system inner membrane component AM586_23020 PF02321 Outer membrane efflux protein AM586_23025 PF07690 Major Facilitator Superfamily AM586_23030 PF13533 Biotin-lipoyl like AM586_23045 PF00230 Major intrinsic protein AM586_23060 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM586_23060 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM586_23075 PF00072 Response regulator receiver domain AM586_23075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_23075 PF13426 PAS domain AM586_23085 PF13276 HTH-like domain AM586_23085 PF00665 Integrase core domain AM586_23085 PF13333 Integrase core domain AM586_23090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM586_23090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM586_23095 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM586_23095 PF00364 Biotin-requiring enzyme AM586_23095 PF02817 e3 binding domain AM586_23100 PF17831 Pyruvate dehydrogenase E1 component middle domain AM586_23100 PF00456 Transketolase, thiamine diphosphate binding domain AM586_23105 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM586_23105 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM586_23110 PF01432 Peptidase family M3 AM586_23125 PF13458 Periplasmic binding protein AM586_23130 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM586_23140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_23140 PF03466 LysR substrate binding domain AM586_23145 PF01790 Prolipoprotein diacylglyceryl transferase AM586_23170 PF00166 Chaperonin 10 Kd subunit AM586_23175 PF00118 TCP-1/cpn60 chaperonin family AM586_23185 PF00144 Beta-lactamase AM586_23190 PF00672 HAMP domain AM586_23190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_23190 PF02203 Tar ligand binding domain homologue AM586_23205 PF07690 Major Facilitator Superfamily AM586_23215 PF08666 SAF domain AM586_23215 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM586_23220 PF13609 Gram-negative porin AM586_23225 PF03466 LysR substrate binding domain AM586_23225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_23230 PF07690 Major Facilitator Superfamily AM586_23235 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM586_23235 PF13378 Enolase C-terminal domain-like AM586_23240 PF03328 HpcH/HpaI aldolase/citrate lyase family AM586_23245 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM586_23245 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM586_23250 PF05161 MOFRL family AM586_23250 PF13660 Domain of unknown function (DUF4147) AM586_23255 PF01380 SIS domain AM586_23255 PF01418 Helix-turn-helix domain, rpiR family AM586_23255 PF02685 Glucokinase AM586_23260 PF00128 Alpha amylase, catalytic domain AM586_23265 PF11852 Domain of unknown function (DUF3372) AM586_23265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM586_23265 PF18494 Pullulanase Ins domain AM586_23265 PF17967 Pullulanase N2 domain AM586_23265 PF03714 Bacterial pullanase-associated domain AM586_23270 PF08031 Berberine and berberine like AM586_23270 PF01565 FAD binding domain AM586_23275 PF01418 Helix-turn-helix domain, rpiR family AM586_23275 PF01380 SIS domain AM586_23275 PF02685 Glucokinase AM586_23280 PF07690 Major Facilitator Superfamily AM586_23295 PF07690 Major Facilitator Superfamily AM586_23300 PF00107 Zinc-binding dehydrogenase AM586_23300 PF08240 Alcohol dehydrogenase GroES-like domain AM586_23305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_23305 PF03466 LysR substrate binding domain AM586_23315 PF04143 Sulphur transport AM586_23330 PF00128 Alpha amylase, catalytic domain AM586_23335 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM586_23335 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM586_23335 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM586_23335 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM586_23345 PF03880 DbpA RNA binding domain AM586_23345 PF00271 Helicase conserved C-terminal domain AM586_23345 PF00270 DEAD/DEAH box helicase AM586_23350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_23350 PF03466 LysR substrate binding domain AM586_23370 PF04820 Tryptophan halogenase AM586_23380 PF00128 Alpha amylase, catalytic domain AM586_23380 PF10438 Cyclo-malto-dextrinase C-terminal domain AM586_23380 PF09087 Cyclomaltodextrinase, N-terminal AM586_23400 PF00583 Acetyltransferase (GNAT) family AM586_23405 PF07969 Amidohydrolase family AM586_23415 PF00005 ABC transporter AM586_23415 PF00664 ABC transporter transmembrane region AM586_23420 PF00664 ABC transporter transmembrane region AM586_23420 PF00005 ABC transporter AM586_23425 PF07694 5TMR of 5TMR-LYT AM586_23425 PF00990 Diguanylate cyclase, GGDEF domain AM586_23475 PF02203 Tar ligand binding domain homologue AM586_23475 PF00672 HAMP domain AM586_23475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_23480 PF07690 Major Facilitator Superfamily AM586_23530 PF00873 AcrB/AcrD/AcrF family AM586_23545 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM586_23550 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM586_23550 PF01433 Peptidase family M1 domain AM586_23550 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM586_23560 PF00107 Zinc-binding dehydrogenase AM586_23560 PF08240 Alcohol dehydrogenase GroES-like domain AM586_23565 PF02142 MGS-like domain AM586_23580 PF01709 Transcriptional regulator AM586_23585 PF02844 Phosphoribosylglycinamide synthetase, N domain AM586_23585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM586_23585 PF02843 Phosphoribosylglycinamide synthetase, C domain AM586_23595 PF01218 Coproporphyrinogen III oxidase AM586_23600 PF01467 Cytidylyltransferase-like AM586_23610 PF02590 Predicted SPOUT methyltransferase AM586_23615 PF02545 Maf-like protein AM586_23620 PF00575 S1 RNA binding domain AM586_23620 PF10150 Ribonuclease E/G family AM586_23630 PF12849 PBP superfamily domain AM586_23635 PF00005 ABC transporter AM586_23640 PF00528 Binding-protein-dependent transport system inner membrane component AM586_23645 PF02634 FdhD/NarQ family AM586_23650 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM586_23650 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM586_23650 PF01568 Molydopterin dinucleotide binding domain AM586_23650 PF00384 Molybdopterin oxidoreductase AM586_23650 PF12838 4Fe-4S dicluster domain AM586_23655 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM586_23655 PF10531 SLBB domain AM586_23655 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM586_23660 PF07690 Major Facilitator Superfamily AM586_23665 PF12728 Helix-turn-helix domain AM586_23665 PF12727 PBP superfamily domain AM586_23670 PF00501 AMP-binding enzyme AM586_23670 PF13193 AMP-binding enzyme C-terminal domain AM586_23690 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM586_23695 PF00664 ABC transporter transmembrane region AM586_23695 PF00005 ABC transporter AM586_23710 PF00082 Subtilase family AM586_23710 PF05922 Peptidase inhibitor I9 AM586_23715 PF00672 HAMP domain AM586_23715 PF02203 Tar ligand binding domain homologue AM586_23715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_23725 PF02811 PHP domain AM586_23725 PF01336 OB-fold nucleic acid binding domain AM586_23725 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM586_23725 PF14579 Helix-hairpin-helix motif AM586_23725 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM586_23740 PF02321 Outer membrane efflux protein AM586_23745 PF00529 HlyD membrane-fusion protein of T1SS AM586_23750 PF00005 ABC transporter AM586_23750 PF00664 ABC transporter transmembrane region AM586_23755 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) AM586_23765 PF02743 Cache domain AM586_23765 PF00211 Adenylate and Guanylate cyclase catalytic domain AM586_23765 PF00672 HAMP domain AM586_23780 PF00027 Cyclic nucleotide-binding domain AM586_23780 PF13545 Crp-like helix-turn-helix domain AM586_23790 PF00005 ABC transporter AM586_23800 PF00534 Glycosyl transferases group 1 AM586_23800 PF13439 Glycosyltransferase Family 4 AM586_23810 PF00535 Glycosyl transferase family 2 AM586_23820 PF01757 Acyltransferase family AM586_23825 PF13426 PAS domain AM586_23825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_23825 PF00072 Response regulator receiver domain AM586_23830 PF00271 Helicase conserved C-terminal domain AM586_23830 PF00270 DEAD/DEAH box helicase AM586_23845 PF08281 Sigma-70, region 4 AM586_23845 PF04542 Sigma-70 region 2 AM586_23850 PF00082 Subtilase family AM586_23870 PF08448 PAS fold AM586_23870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_23870 PF00512 His Kinase A (phospho-acceptor) domain AM586_23870 PF13188 PAS domain AM586_23870 PF00072 Response regulator receiver domain AM586_23875 PF00067 Cytochrome P450 AM586_23900 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM586_23900 PF01348 Type II intron maturase AM586_23910 PF04546 Sigma-70, non-essential region AM586_23910 PF03979 Sigma-70 factor, region 1.1 AM586_23910 PF04539 Sigma-70 region 3 AM586_23910 PF04545 Sigma-70, region 4 AM586_23910 PF00140 Sigma-70 factor, region 1.2 AM586_23910 PF04542 Sigma-70 region 2 AM586_23915 PF08275 DNA primase catalytic core, N-terminal domain AM586_23915 PF01807 CHC2 zinc finger AM586_23915 PF08278 DNA primase DnaG DnaB-binding AM586_23915 PF10410 DnaB-helicase binding domain of primase AM586_23925 PF01165 Ribosomal protein S21 AM586_23935 PF02885 Glycosyl transferase family, helical bundle domain AM586_23940 PF00793 DAHP synthetase I family AM586_23945 PF00814 Glycoprotease family AM586_23960 PF02660 Glycerol-3-phosphate acyltransferase AM586_23965 PF04073 Aminoacyl-tRNA editing domain AM586_23975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_23980 PF00873 AcrB/AcrD/AcrF family AM586_23985 PF00589 Phage integrase family AM586_23985 PF02899 Phage integrase, N-terminal SAM-like domain AM586_23995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM586_24000 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component AM586_24005 PF03480 Bacterial extracellular solute-binding protein, family 7 AM586_24010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_24010 PF00512 His Kinase A (phospho-acceptor) domain AM586_24010 PF00989 PAS fold AM586_24015 PF00072 Response regulator receiver domain AM586_24015 PF00196 Bacterial regulatory proteins, luxR family AM586_24025 PF08331 Domain of unknown function (DUF1730) AM586_24030 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM586_24035 PF11741 AMIN domain AM586_24035 PF01520 N-acetylmuramoyl-L-alanine amidase AM586_24045 PF00194 Eukaryotic-type carbonic anhydrase AM586_24050 PF09335 SNARE associated Golgi protein AM586_24060 PF08676 MutL C terminal dimerisation domain AM586_24060 PF01119 DNA mismatch repair protein, C-terminal domain AM586_24090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_24090 PF03466 LysR substrate binding domain AM586_24095 PF13378 Enolase C-terminal domain-like AM586_24105 PF04286 Protein of unknown function (DUF445) AM586_24110 PF02515 CoA-transferase family III AM586_24115 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_24115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_24115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_24125 PF00440 Bacterial regulatory proteins, tetR family AM586_24130 PF02254 TrkA-N domain AM586_24130 PF00999 Sodium/hydrogen exchanger family AM586_24155 PF00043 Glutathione S-transferase, C-terminal domain AM586_24155 PF02798 Glutathione S-transferase, N-terminal domain AM586_24165 PF01966 HD domain AM586_24165 PF13286 Phosphohydrolase-associated domain AM586_24175 PF00919 Uncharacterized protein family UPF0004 AM586_24175 PF01938 TRAM domain AM586_24175 PF04055 Radical SAM superfamily AM586_24180 PF02562 PhoH-like protein AM586_24185 PF02130 Uncharacterized protein family UPF0054 AM586_24190 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_24195 PF01799 [2Fe-2S] binding domain AM586_24195 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_24200 PF00571 CBS domain AM586_24200 PF03471 Transporter associated domain AM586_24205 PF00795 Carbon-nitrogen hydrolase AM586_24210 PF02091 Glycyl-tRNA synthetase alpha subunit AM586_24215 PF02092 Glycyl-tRNA synthetase beta subunit AM586_24215 PF05746 DALR anticodon binding domain AM586_24240 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM586_24240 PF00534 Glycosyl transferases group 1 AM586_24245 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM586_24250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM586_24250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM586_24250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM586_24250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM586_24260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM586_24260 PF00953 Glycosyl transferase family 4 AM586_24265 PF00149 Calcineurin-like phosphoesterase AM586_24270 PF01553 Acyltransferase AM586_24275 PF01979 Amidohydrolase family AM586_24280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM586_24280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM586_24285 PF00156 Phosphoribosyl transferase domain AM586_24290 PF03652 Holliday junction resolvase AM586_24295 PF02622 Uncharacterized ACR, COG1678 AM586_24300 PF03441 FAD binding domain of DNA photolyase AM586_24300 PF00875 DNA photolyase AM586_24305 PF01627 Hpt domain AM586_24305 PF00072 Response regulator receiver domain AM586_24305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_24305 PF01584 CheW-like domain AM586_24310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_24310 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM586_24315 PF01584 CheW-like domain AM586_24320 PF00072 Response regulator receiver domain AM586_24325 PF00072 Response regulator receiver domain AM586_24330 PF00301 Rubredoxin AM586_24340 PF00202 Aminotransferase class-III AM586_24345 PF01566 Natural resistance-associated macrophage protein AM586_24355 PF01544 CorA-like Mg2+ transporter protein AM586_24360 PF00912 Transglycosylase AM586_24365 PF01488 Shikimate / quinate 5-dehydrogenase AM586_24365 PF08501 Shikimate dehydrogenase substrate binding domain AM586_24365 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM586_24375 PF00773 RNB domain AM586_24380 PF04345 Chorismate lyase AM586_24385 PF05728 Uncharacterised protein family (UPF0227) AM586_24390 PF08245 Mur ligase middle domain AM586_24390 PF01225 Mur ligase family, catalytic domain AM586_24390 PF02875 Mur ligase family, glutamate ligase domain AM586_24400 PF08534 Redoxin AM586_24405 PF01220 Dehydroquinase class II AM586_24410 PF00364 Biotin-requiring enzyme AM586_24415 PF00289 Biotin carboxylase, N-terminal domain AM586_24415 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM586_24415 PF02785 Biotin carboxylase C-terminal domain AM586_24430 PF00294 pfkB family carbohydrate kinase AM586_24435 PF02325 YGGT family AM586_24450 PF00534 Glycosyl transferases group 1 AM586_24455 PF13439 Glycosyltransferase Family 4 AM586_24455 PF00534 Glycosyl transferases group 1 AM586_24465 PF00268 Ribonucleotide reductase, small chain AM586_24470 PF03477 ATP cone domain AM586_24470 PF02867 Ribonucleotide reductase, barrel domain AM586_24470 PF00317 Ribonucleotide reductase, all-alpha domain AM586_24475 PF00072 Response regulator receiver domain AM586_24475 PF00158 Sigma-54 interaction domain AM586_24475 PF02954 Bacterial regulatory protein, Fis family AM586_24480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_24480 PF00512 His Kinase A (phospho-acceptor) domain AM586_24490 PF01578 Cytochrome C assembly protein AM586_24495 PF00005 ABC transporter AM586_24500 PF00528 Binding-protein-dependent transport system inner membrane component AM586_24505 PF09084 NMT1/THI5 like AM586_24520 PF02978 Signal peptide binding domain AM586_24520 PF02881 SRP54-type protein, helical bundle domain AM586_24520 PF00448 SRP54-type protein, GTPase domain AM586_24530 PF00245 Alkaline phosphatase AM586_24535 PF00245 Alkaline phosphatase AM586_24545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_24545 PF03466 LysR substrate binding domain AM586_24550 PF01464 Transglycosylase SLT domain AM586_24550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM586_24555 PF04073 Aminoacyl-tRNA editing domain AM586_24555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM586_24555 PF03129 Anticodon binding domain AM586_24580 PF00916 Sulfate permease family AM586_24580 PF01740 STAS domain AM586_24585 PF00034 Cytochrome c AM586_24590 PF00034 Cytochrome c AM586_24595 PF01434 Peptidase family M41 AM586_24595 PF17862 AAA+ lid domain AM586_24595 PF00004 ATPase family associated with various cellular activities (AAA) AM586_24615 PF01553 Acyltransferase AM586_24620 PF05175 Methyltransferase small domain AM586_24625 PF07690 Major Facilitator Superfamily AM586_24655 PF07722 Peptidase C26 AM586_24660 PF01751 Toprim domain AM586_24660 PF00204 DNA gyrase B AM586_24660 PF00986 DNA gyrase B subunit, carboxyl terminus AM586_24660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_24665 PF00521 DNA gyrase/topoisomerase IV, subunit A AM586_24670 PF10411 Disulfide bond isomerase protein N-terminus AM586_24670 PF13098 Thioredoxin-like domain AM586_24710 PF03575 Peptidase family S51 AM586_24725 PF14698 Argininosuccinate lyase C-terminal AM586_24725 PF00206 Lyase AM586_24735 PF13419 Haloacid dehalogenase-like hydrolase AM586_24745 PF12705 PD-(D/E)XK nuclease superfamily AM586_24745 PF00580 UvrD/REP helicase N-terminal domain AM586_24745 PF13361 UvrD-like helicase C-terminal domain AM586_24750 PF01575 MaoC like domain AM586_24750 PF00171 Aldehyde dehydrogenase family AM586_24755 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_24760 PF02803 Thiolase, C-terminal domain AM586_24760 PF00108 Thiolase, N-terminal domain AM586_24770 PF03061 Thioesterase superfamily AM586_24775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM586_24775 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM586_24775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM586_24780 PF00378 Enoyl-CoA hydratase/isomerase AM586_24785 PF00970 Oxidoreductase FAD-binding domain AM586_24785 PF00175 Oxidoreductase NAD-binding domain AM586_24785 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_24790 PF01883 Iron-sulfur cluster assembly protein AM586_24795 PF05138 Phenylacetic acid catabolic protein AM586_24800 PF06243 Phenylacetic acid degradation B AM586_24805 PF05138 Phenylacetic acid catabolic protein AM586_24820 PF18027 Cytosolic carboxypeptidase N-terminal domain AM586_24820 PF00246 Zinc carboxypeptidase AM586_24830 PF00881 Nitroreductase family AM586_24835 PF13609 Gram-negative porin AM586_24840 PF01523 Putative modulator of DNA gyrase AM586_24845 PF04751 Protein of unknown function (DUF615) AM586_24850 PF00994 Probable molybdopterin binding domain AM586_24855 PF02230 Phospholipase/Carboxylesterase AM586_24870 PF00202 Aminotransferase class-III AM586_24875 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM586_24885 PF00672 HAMP domain AM586_24885 PF02203 Tar ligand binding domain homologue AM586_24885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_24890 PF06779 Uncharacterised MFS-type transporter YbfB AM586_24905 PF02245 Methylpurine-DNA glycosylase (MPG) AM586_24920 PF01176 Translation initiation factor 1A / IF-1 AM586_24925 PF01176 Translation initiation factor 1A / IF-1 AM586_24935 PF02321 Outer membrane efflux protein AM586_24940 PF00873 AcrB/AcrD/AcrF family AM586_24945 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM586_24955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_24955 PF03466 LysR substrate binding domain AM586_24985 PF00528 Binding-protein-dependent transport system inner membrane component AM586_24990 PF01979 Amidohydrolase family AM586_24995 PF05962 HutD AM586_25000 PF01979 Amidohydrolase family AM586_25010 PF00221 Aromatic amino acid lyase AM586_25015 PF17392 Urocanase C-terminal domain AM586_25015 PF01175 Urocanase Rossmann-like domain AM586_25015 PF17391 Urocanase N-terminal domain AM586_25020 PF07969 Amidohydrolase family AM586_25030 PF02805 Metal binding domain of Ada AM586_25030 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM586_25030 PF12833 Helix-turn-helix domain AM586_25030 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM586_25035 PF07702 UTRA domain AM586_25035 PF00392 Bacterial regulatory proteins, gntR family AM586_25040 PF00085 Thioredoxin AM586_25045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM586_25045 PF07498 Rho termination factor, N-terminal domain AM586_25045 PF07497 Rho termination factor, RNA-binding domain AM586_25055 PF01197 Ribosomal protein L31 AM586_25075 PF13520 Amino acid permease AM586_25085 PF13356 Arm DNA-binding domain AM586_25085 PF00589 Phage integrase family AM586_25135 PF00072 Response regulator receiver domain AM586_25135 PF01627 Hpt domain AM586_25135 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_25135 PF00512 His Kinase A (phospho-acceptor) domain AM586_25135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_25135 PF00672 HAMP domain AM586_25140 PF00072 Response regulator receiver domain AM586_25145 PF13439 Glycosyltransferase Family 4 AM586_25145 PF00534 Glycosyl transferases group 1 AM586_25155 PF16363 GDP-mannose 4,6 dehydratase AM586_25160 PF16363 GDP-mannose 4,6 dehydratase AM586_25165 PF00390 Malic enzyme, N-terminal domain AM586_25165 PF01515 Phosphate acetyl/butaryl transferase AM586_25165 PF03949 Malic enzyme, NAD binding domain AM586_25170 PF00586 AIR synthase related protein, N-terminal domain AM586_25170 PF02769 AIR synthase related protein, C-terminal domain AM586_25175 PF03707 Bacterial signalling protein N terminal repeat AM586_25175 PF00990 Diguanylate cyclase, GGDEF domain AM586_25175 PF00563 EAL domain AM586_25180 PF01627 Hpt domain AM586_25180 PF00512 His Kinase A (phospho-acceptor) domain AM586_25180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_25180 PF00672 HAMP domain AM586_25180 PF00072 Response regulator receiver domain AM586_25180 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM586_25185 PF02464 Competence-damaged protein AM586_25190 PF00149 Calcineurin-like phosphoesterase AM586_25195 PF05193 Peptidase M16 inactive domain AM586_25195 PF00675 Insulinase (Peptidase family M16) AM586_25210 PF16916 Dimerisation domain of Zinc Transporter AM586_25210 PF01545 Cation efflux family AM586_25215 PF00291 Pyridoxal-phosphate dependent enzyme AM586_25220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM586_25225 PF00899 ThiF family AM586_25230 PF01243 Pyridoxamine 5'-phosphate oxidase AM586_25230 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM586_25240 PF01625 Peptide methionine sulfoxide reductase AM586_25245 PF01613 Flavin reductase like domain AM586_25250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_25250 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_25250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_25255 PF03922 OmpW family AM586_25270 PF03481 Putative GTP-binding controlling metal-binding AM586_25270 PF01300 Telomere recombination AM586_25275 PF02222 ATP-grasp domain AM586_25275 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM586_25280 PF00731 AIR carboxylase AM586_25285 PF01259 SAICAR synthetase AM586_25290 PF01116 Fructose-bisphosphate aldolase class-II AM586_25295 PF02887 Pyruvate kinase, alpha/beta domain AM586_25295 PF00224 Pyruvate kinase, barrel domain AM586_25300 PF00162 Phosphoglycerate kinase AM586_25320 PF00561 alpha/beta hydrolase fold AM586_25335 PF01967 MoaC family AM586_25365 PF07676 WD40-like Beta Propeller Repeat AM586_25365 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region AM586_25365 PF00326 Prolyl oligopeptidase family AM586_25375 PF07963 Prokaryotic N-terminal methylation motif AM586_25375 PF00114 Pilin (bacterial filament) AM586_25385 PF02629 CoA binding domain AM586_25385 PF00549 CoA-ligase AM586_25390 PF00549 CoA-ligase AM586_25390 PF08442 ATP-grasp domain AM586_25400 PF02631 RecX family AM586_25405 PF00154 recA bacterial DNA recombination protein AM586_25410 PF00072 Response regulator receiver domain AM586_25410 PF00486 Transcriptional regulatory protein, C terminal AM586_25415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_25415 PF00512 His Kinase A (phospho-acceptor) domain AM586_25415 PF08521 Two-component sensor kinase N-terminal AM586_25425 PF00474 Sodium:solute symporter family AM586_25430 PF02769 AIR synthase related protein, C-terminal domain AM586_25430 PF00586 AIR synthase related protein, N-terminal domain AM586_25435 PF11638 DnaA N-terminal domain AM586_25435 PF08299 Bacterial dnaA protein helix-turn-helix AM586_25435 PF00308 Bacterial dnaA protein AM586_25445 PF12626 Polymerase A arginine-rich C-terminus AM586_25445 PF01743 Poly A polymerase head domain AM586_25445 PF12627 Probable RNA and SrmB- binding site of polymerase A AM586_25450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM586_25460 PF16697 Inner membrane component of T3SS, cytoplasmic domain AM586_25465 PF02321 Outer membrane efflux protein AM586_25485 PF03781 Sulfatase-modifying factor enzyme 1 AM586_25490 PF03793 PASTA domain AM586_25490 PF00069 Protein kinase domain AM586_25550 PF00158 Sigma-54 interaction domain AM586_25550 PF00072 Response regulator receiver domain AM586_25550 PF02954 Bacterial regulatory protein, Fis family AM586_25555 PF00664 ABC transporter transmembrane region AM586_25555 PF03412 Peptidase C39 family AM586_25555 PF00005 ABC transporter AM586_25565 PF02548 Ketopantoate hydroxymethyltransferase AM586_25575 PF07690 Major Facilitator Superfamily AM586_25580 PF00120 Glutamine synthetase, catalytic domain AM586_25585 PF06580 Histidine kinase AM586_25585 PF07694 5TMR of 5TMR-LYT AM586_25590 PF04397 LytTr DNA-binding domain AM586_25590 PF00072 Response regulator receiver domain AM586_25595 PF00171 Aldehyde dehydrogenase family AM586_25600 PF00474 Sodium:solute symporter family AM586_25605 PF00202 Aminotransferase class-III AM586_25610 PF00120 Glutamine synthetase, catalytic domain AM586_25615 PF07722 Peptidase C26 AM586_25625 PF17137 Domain of unknown function (DUF5110) AM586_25625 PF01055 Glycosyl hydrolases family 31 AM586_25625 PF13802 Galactose mutarotase-like AM586_25625 PF16338 Domain of unknown function (DUF4968) AM586_25630 PF00171 Aldehyde dehydrogenase family AM586_25645 PF00356 Bacterial regulatory proteins, lacI family AM586_25645 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM586_25655 PF07690 Major Facilitator Superfamily AM586_25660 PF13609 Gram-negative porin AM586_25665 PF00484 Carbonic anhydrase AM586_25670 PF00684 DnaJ central domain AM586_25670 PF01556 DnaJ C terminal domain AM586_25670 PF00226 DnaJ domain AM586_25675 PF00012 Hsp70 protein AM586_25680 PF01025 GrpE AM586_25685 PF00762 Ferrochelatase AM586_25690 PF02463 RecF/RecN/SMC N terminal domain AM586_25695 PF01513 ATP-NAD kinase AM586_25710 PF07995 Glucose / Sorbosone dehydrogenase AM586_25715 PF02566 OsmC-like protein AM586_25720 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_25725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM586_25730 PF02321 Outer membrane efflux protein AM586_25745 PF00440 Bacterial regulatory proteins, tetR family AM586_25750 PF03692 Putative zinc- or iron-chelating domain AM586_25755 PF02673 Bacitracin resistance protein BacA AM586_25760 PF00270 DEAD/DEAH box helicase AM586_25760 PF09382 RQC domain AM586_25760 PF00271 Helicase conserved C-terminal domain AM586_25760 PF16124 RecQ zinc-binding AM586_25760 PF00570 HRDC domain AM586_25765 PF00072 Response regulator receiver domain AM586_25765 PF04397 LytTr DNA-binding domain AM586_25775 PF02390 Putative methyltransferase AM586_25785 PF03707 Bacterial signalling protein N terminal repeat AM586_25785 PF00990 Diguanylate cyclase, GGDEF domain AM586_25785 PF00563 EAL domain AM586_25790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_25790 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM586_25790 PF00512 His Kinase A (phospho-acceptor) domain AM586_25790 PF00072 Response regulator receiver domain AM586_25810 PF00132 Bacterial transferase hexapeptide (six repeats) AM586_25820 PF03167 Uracil DNA glycosylase superfamily AM586_25830 PF12697 Alpha/beta hydrolase family AM586_25840 PF03707 Bacterial signalling protein N terminal repeat AM586_25840 PF00990 Diguanylate cyclase, GGDEF domain AM586_25840 PF00563 EAL domain AM586_25845 PF00989 PAS fold AM586_25845 PF00512 His Kinase A (phospho-acceptor) domain AM586_25845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_25850 PF07690 Major Facilitator Superfamily AM586_25855 PF02926 THUMP domain AM586_25855 PF01170 Putative RNA methylase family UPF0020 AM586_25870 PF00171 Aldehyde dehydrogenase family AM586_25885 PF09334 tRNA synthetases class I (M) AM586_25885 PF13603 Leucyl-tRNA synthetase, Domain 2 AM586_25885 PF00133 tRNA synthetases class I (I, L, M and V) AM586_25885 PF08264 Anticodon-binding domain of tRNA AM586_25895 PF05173 Dihydrodipicolinate reductase, C-terminus AM586_25895 PF01113 Dihydrodipicolinate reductase, N-terminus AM586_25900 PF04355 SmpA / OmlA family AM586_25905 PF01475 Ferric uptake regulator family AM586_25910 PF01628 HrcA protein C terminal domain AM586_25910 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding AM586_25940 PF00398 Ribosomal RNA adenine dimethylase AM586_25945 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM586_25950 PF00639 PPIC-type PPIASE domain AM586_25950 PF09312 SurA N-terminal domain AM586_25955 PF04453 LPS transport system D AM586_25960 PF01636 Phosphotransferase enzyme family AM586_25965 PF00483 Nucleotidyl transferase AM586_25970 PF00557 Metallopeptidase family M24 AM586_25970 PF05195 Aminopeptidase P, N-terminal domain AM586_25975 PF01494 FAD binding domain AM586_25980 PF03466 LysR substrate binding domain AM586_25980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_26000 PF02770 Acyl-CoA dehydrogenase, middle domain AM586_26000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM586_26000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM586_26015 PF03328 HpcH/HpaI aldolase/citrate lyase family AM586_26020 PF03480 Bacterial extracellular solute-binding protein, family 7 AM586_26030 PF02233 NAD(P) transhydrogenase beta subunit AM586_26035 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM586_26040 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM586_26040 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM586_26055 PF01584 CheW-like domain AM586_26060 PF02203 Tar ligand binding domain homologue AM586_26060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM586_26060 PF00672 HAMP domain AM586_26070 PF01367 5'-3' exonuclease, C-terminal SAM fold AM586_26070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM586_26080 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AM586_26080 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM586_26100 PF07664 Ferrous iron transport protein B C terminus AM586_26100 PF02421 Ferrous iron transport protein B AM586_26100 PF07670 Nucleoside recognition AM586_26120 PF00210 Ferritin-like domain AM586_26125 PF01467 Cytidylyltransferase-like AM586_26125 PF00294 pfkB family carbohydrate kinase AM586_26130 PF13417 Glutathione S-transferase, N-terminal domain AM586_26130 PF00043 Glutathione S-transferase, C-terminal domain AM586_26135 PF08328 Adenylosuccinate lyase C-terminal AM586_26135 PF00206 Lyase AM586_26140 PF07715 TonB-dependent Receptor Plug Domain AM586_26140 PF00593 TonB dependent receptor AM586_26145 PF01292 Prokaryotic cytochrome b561 AM586_26150 PF04264 YceI-like domain AM586_26155 PF04264 YceI-like domain AM586_26165 PF04226 Transglycosylase associated protein AM586_26170 PF13396 Phospholipase_D-nuclease N-terminal AM586_26170 PF13091 PLD-like domain AM586_26175 PF10459 Peptidase S46 AM586_26200 PF12146 Serine aminopeptidase, S33 AM586_26205 PF03466 LysR substrate binding domain AM586_26205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_26210 PF07690 Major Facilitator Superfamily AM586_26215 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_26220 PF13520 Amino acid permease AM586_26225 PF02082 Transcriptional regulator AM586_26230 PF00970 Oxidoreductase FAD-binding domain AM586_26230 PF00042 Globin AM586_26230 PF00175 Oxidoreductase NAD-binding domain AM586_26240 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM586_26245 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM586_26250 PF05088 Bacterial NAD-glutamate dehydrogenase AM586_26255 PF04996 Succinylarginine dihydrolase AM586_26260 PF00171 Aldehyde dehydrogenase family AM586_26265 PF04958 Arginine N-succinyltransferase beta subunit AM586_26270 PF04958 Arginine N-succinyltransferase beta subunit AM586_26275 PF00202 Aminotransferase class-III AM586_26280 PF12833 Helix-turn-helix domain AM586_26300 PF02469 Fasciclin domain AM586_26305 PF02469 Fasciclin domain AM586_26310 PF02310 B12 binding domain AM586_26310 PF02607 B12 binding domain AM586_26310 PF13411 MerR HTH family regulatory protein AM586_26315 PF01227 GTP cyclohydrolase I AM586_26320 PF07549 SecD/SecF GG Motif AM586_26320 PF02355 Protein export membrane protein AM586_26325 PF13721 SecD export protein N-terminal TM region AM586_26325 PF02355 Protein export membrane protein AM586_26325 PF07549 SecD/SecF GG Motif AM586_26330 PF02699 Preprotein translocase subunit AM586_26335 PF01702 Queuine tRNA-ribosyltransferase AM586_26340 PF02547 Queuosine biosynthesis protein AM586_26345 PF00270 DEAD/DEAH box helicase AM586_26345 PF17191 RecG wedge domain AM586_26345 PF00271 Helicase conserved C-terminal domain AM586_26370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_26380 PF01979 Amidohydrolase family AM586_26395 PF00440 Bacterial regulatory proteins, tetR family AM586_26400 PF00005 ABC transporter AM586_26405 PF00375 Sodium:dicarboxylate symporter family AM586_26410 PF17763 Glutaminase/Asparaginase C-terminal domain AM586_26410 PF00710 Asparaginase, N-terminal AM586_26420 PF13609 Gram-negative porin AM586_26425 PF07690 Major Facilitator Superfamily AM586_26430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM586_26430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM586_26430 PF01842 ACT domain AM586_26435 PF03737 Aldolase/RraA AM586_26440 PF03466 LysR substrate binding domain AM586_26440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_26450 PF00005 ABC transporter AM586_26450 PF00664 ABC transporter transmembrane region AM586_26455 PF03061 Thioesterase superfamily AM586_26460 PF16655 PhoD-like phosphatase, N-terminal domain AM586_26460 PF09423 PhoD-like phosphatase AM586_26465 PF13193 AMP-binding enzyme C-terminal domain AM586_26465 PF00501 AMP-binding enzyme AM586_26470 PF13193 AMP-binding enzyme C-terminal domain AM586_26470 PF00501 AMP-binding enzyme AM586_26480 PF00384 Molybdopterin oxidoreductase AM586_26480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM586_26480 PF01568 Molydopterin dinucleotide binding domain AM586_26485 PF01546 Peptidase family M20/M25/M40 AM586_26485 PF07687 Peptidase dimerisation domain AM586_26490 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM586_26490 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM586_26495 PF09411 Lipid A 3-O-deacylase (PagL) AM586_26500 PF07690 Major Facilitator Superfamily AM586_26505 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM586_26505 PF00128 Alpha amylase, catalytic domain AM586_26510 PF01161 Phosphatidylethanolamine-binding protein AM586_26515 PF07690 Major Facilitator Superfamily AM586_26525 PF04205 FMN-binding domain AM586_26525 PF00890 FAD binding domain AM586_26530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_26530 PF03466 LysR substrate binding domain AM586_26560 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_26560 PF01799 [2Fe-2S] binding domain AM586_26560 PF10518 TAT (twin-arginine translocation) pathway signal sequence AM586_26565 PF00941 FAD binding domain in molybdopterin dehydrogenase AM586_26565 PF03450 CO dehydrogenase flavoprotein C-terminal domain AM586_26570 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain AM586_26570 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase AM586_26575 PF00144 Beta-lactamase AM586_26580 PF00072 Response regulator receiver domain AM586_26580 PF04397 LytTr DNA-binding domain AM586_26585 PF13492 GAF domain AM586_26585 PF07694 5TMR of 5TMR-LYT AM586_26585 PF06580 Histidine kinase AM586_26585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_26590 PF00753 Metallo-beta-lactamase superfamily AM586_26600 PF00691 OmpA family AM586_26600 PF04972 BON domain AM586_26660 PF06969 HemN C-terminal domain AM586_26660 PF04055 Radical SAM superfamily AM586_26665 PF02405 Permease MlaE AM586_26670 PF00005 ABC transporter AM586_26695 PF02129 X-Pro dipeptidyl-peptidase (S15 family) AM586_26700 PF00768 D-alanyl-D-alanine carboxypeptidase AM586_26700 PF07943 Penicillin-binding protein 5, C-terminal domain AM586_26705 PF00248 Aldo/keto reductase family AM586_26715 PF01066 CDP-alcohol phosphatidyltransferase AM586_26745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM586_26745 PF03466 LysR substrate binding domain AM586_26750 PF10396 GTP-binding protein TrmE N-terminus AM586_26750 PF12631 MnmE helical domain AM586_26750 PF01926 50S ribosome-binding GTPase AM586_26755 PF02096 60Kd inner membrane protein AM586_26755 PF14849 YidC periplasmic domain AM586_26760 PF01809 Putative membrane protein insertion efficiency factor AM586_26765 PF00825 Ribonuclease P AM586_26855 PF00437 Type II/IV secretion system protein AM586_26900 PF08751 TrwC relaxase AM586_26900 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM586_26900 PF18340 DNA relaxase TraI 2B/2B-like domain AM586_26900 PF07057 DNA helicase TraI AM586_26990 PF01555 DNA methylase AM586_27065 PF02195 ParB-like nuclease domain AM586_27065 PF17762 HTH domain found in ParB protein AM586_27070 PF13614 AAA domain AM586_27080 PF00196 Bacterial regulatory proteins, luxR family AM586_27080 PF00072 Response regulator receiver domain AM586_27090 PF07715 TonB-dependent Receptor Plug Domain AM586_27090 PF07660 Secretin and TonB N terminus short domain AM586_27090 PF00593 TonB dependent receptor AM586_27100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27100 PF07730 Histidine kinase AM586_27115 PF13098 Thioredoxin-like domain AM586_27115 PF10411 Disulfide bond isomerase protein N-terminus AM586_27130 PF01464 Transglycosylase SLT domain AM586_27140 PF06834 TraU protein AM586_27195 PF10502 Signal peptidase, peptidase S26 AM586_27205 PF06122 Conjugative relaxosome accessory transposon protein AM586_27255 PF02899 Phage integrase, N-terminal SAM-like domain AM586_27255 PF00589 Phage integrase family AM586_27340 PF00589 Phage integrase family AM586_27340 PF02899 Phage integrase, N-terminal SAM-like domain AM586_27365 PF02371 Transposase IS116/IS110/IS902 family AM586_27365 PF01548 Transposase AM586_27370 PF13737 Transposase DDE domain AM586_27385 PF00175 Oxidoreductase NAD-binding domain AM586_27385 PF00970 Oxidoreductase FAD-binding domain AM586_27385 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_27395 PF00285 Citrate synthase, C-terminal domain AM586_27400 PF00355 Rieske [2Fe-2S] domain AM586_27410 PF00355 Rieske [2Fe-2S] domain AM586_27415 PF09084 NMT1/THI5 like AM586_27425 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM586_27425 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM586_27430 PF00970 Oxidoreductase FAD-binding domain AM586_27430 PF00175 Oxidoreductase NAD-binding domain AM586_27430 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_27435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM586_27435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_27440 PF02371 Transposase IS116/IS110/IS902 family AM586_27440 PF01548 Transposase AM586_27480 PF00701 Dihydrodipicolinate synthetase family AM586_27495 PF07044 Protein of unknown function (DUF1329) AM586_27505 PF00171 Aldehyde dehydrogenase family AM586_27510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM586_27520 PF00171 Aldehyde dehydrogenase family AM586_27535 PF02798 Glutathione S-transferase, N-terminal domain AM586_27535 PF00043 Glutathione S-transferase, C-terminal domain AM586_27545 PF01323 DSBA-like thioredoxin domain AM586_27550 PF00866 Ring hydroxylating beta subunit AM586_27555 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM586_27555 PF00355 Rieske [2Fe-2S] domain AM586_27560 PF00106 short chain dehydrogenase AM586_27565 PF00175 Oxidoreductase NAD-binding domain AM586_27565 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_27565 PF00970 Oxidoreductase FAD-binding domain AM586_27570 PF00355 Rieske [2Fe-2S] domain AM586_27585 PF05717 IS66 Orf2 like protein AM586_27590 PF13007 Transposase C of IS166 homeodomain AM586_27590 PF13005 zinc-finger binding domain of transposase IS66 AM586_27590 PF03050 Transposase IS66 family AM586_27590 PF13817 IS66 C-terminal element AM586_27595 PF13610 DDE domain AM586_27600 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM586_27600 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_27605 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_27605 PF00970 Oxidoreductase FAD-binding domain AM586_27605 PF00175 Oxidoreductase NAD-binding domain AM586_27610 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM586_27610 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM586_27620 PF09084 NMT1/THI5 like AM586_27625 PF00355 Rieske [2Fe-2S] domain AM586_27630 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM586_27630 PF00355 Rieske [2Fe-2S] domain AM586_27640 PF07883 Cupin domain AM586_27645 PF00701 Dihydrodipicolinate synthetase family AM586_27650 PF00005 ABC transporter AM586_27655 PF00005 ABC transporter AM586_27655 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_27660 PF13610 DDE domain AM586_27665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM586_27665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM586_27670 PF00111 2Fe-2S iron-sulfur cluster binding domain AM586_27670 PF00175 Oxidoreductase NAD-binding domain AM586_27670 PF00970 Oxidoreductase FAD-binding domain AM586_27675 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM586_27675 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM586_27685 PF09084 NMT1/THI5 like AM586_27690 PF00355 Rieske [2Fe-2S] domain AM586_27695 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM586_27695 PF00355 Rieske [2Fe-2S] domain AM586_27705 PF07883 Cupin domain AM586_27710 PF00701 Dihydrodipicolinate synthetase family AM586_27715 PF00005 ABC transporter AM586_27720 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM586_27720 PF00005 ABC transporter AM586_27725 PF13610 DDE domain AM586_27785 PF07883 Cupin domain AM586_27795 PF00355 Rieske [2Fe-2S] domain AM586_27795 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM586_27830 PF00512 His Kinase A (phospho-acceptor) domain AM586_27830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27835 PF17151 Periplasmic sensor domain AM586_27835 PF00990 Diguanylate cyclase, GGDEF domain AM586_27840 PF00990 Diguanylate cyclase, GGDEF domain AM586_27845 PF03707 Bacterial signalling protein N terminal repeat AM586_27845 PF00563 EAL domain AM586_27845 PF00990 Diguanylate cyclase, GGDEF domain AM586_27850 PF13439 Glycosyltransferase Family 4 AM586_27860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27860 PF07689 KaiB domain AM586_27860 PF00512 His Kinase A (phospho-acceptor) domain AM586_27865 PF00990 Diguanylate cyclase, GGDEF domain AM586_27865 PF03707 Bacterial signalling protein N terminal repeat AM586_27865 PF00563 EAL domain AM586_27875 PF00512 His Kinase A (phospho-acceptor) domain AM586_27875 PF13493 Domain of unknown function (DUF4118) AM586_27875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27875 PF02702 Osmosensitive K+ channel His kinase sensor domain AM586_27900 PF00082 Subtilase family AM586_27900 PF05922 Peptidase inhibitor I9 AM586_27915 PF08447 PAS fold AM586_27915 PF00563 EAL domain AM586_27915 PF08448 PAS fold AM586_27915 PF00990 Diguanylate cyclase, GGDEF domain AM586_27920 PF17149 Periplasmic sensor domain found in signal transduction proteins AM586_27920 PF00672 HAMP domain AM586_27920 PF00512 His Kinase A (phospho-acceptor) domain AM586_27920 PF01627 Hpt domain AM586_27920 PF00072 Response regulator receiver domain AM586_27920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27955 PF13609 Gram-negative porin AM586_27990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27990 PF00512 His Kinase A (phospho-acceptor) domain AM586_27990 PF00989 PAS fold AM586_27995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_27995 PF00512 His Kinase A (phospho-acceptor) domain AM586_27995 PF00672 HAMP domain AM586_28005 PF00563 EAL domain AM586_28005 PF00990 Diguanylate cyclase, GGDEF domain AM586_28005 PF03707 Bacterial signalling protein N terminal repeat AM586_28005 PF13188 PAS domain AM586_28010 PF00072 Response regulator receiver domain AM586_28010 PF00990 Diguanylate cyclase, GGDEF domain AM586_28020 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase AM586_28025 PF00722 Glycosyl hydrolases family 16 AM586_28040 PF04972 BON domain AM586_28055 PF00196 Bacterial regulatory proteins, luxR family AM586_28055 PF03472 Autoinducer binding domain AM586_28060 PF03707 Bacterial signalling protein N terminal repeat AM586_28060 PF00563 EAL domain AM586_28060 PF00990 Diguanylate cyclase, GGDEF domain AM586_28065 PF00990 Diguanylate cyclase, GGDEF domain AM586_28065 PF03707 Bacterial signalling protein N terminal repeat AM586_28065 PF00563 EAL domain AM586_28070 PF00672 HAMP domain AM586_28070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28070 PF06580 Histidine kinase AM586_28070 PF02743 Cache domain AM586_28095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28095 PF08448 PAS fold AM586_28095 PF13426 PAS domain AM586_28095 PF00072 Response regulator receiver domain AM586_28095 PF00512 His Kinase A (phospho-acceptor) domain AM586_28105 PF02702 Osmosensitive K+ channel His kinase sensor domain AM586_28105 PF00512 His Kinase A (phospho-acceptor) domain AM586_28105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28105 PF13493 Domain of unknown function (DUF4118) AM586_28130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28130 PF13188 PAS domain AM586_28130 PF00512 His Kinase A (phospho-acceptor) domain AM586_28130 PF00072 Response regulator receiver domain AM586_28130 PF08448 PAS fold AM586_28135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28135 PF13188 PAS domain AM586_28135 PF00072 Response regulator receiver domain AM586_28135 PF00512 His Kinase A (phospho-acceptor) domain AM586_28135 PF08448 PAS fold AM586_28145 PF00990 Diguanylate cyclase, GGDEF domain AM586_28145 PF01590 GAF domain AM586_28145 PF00563 EAL domain AM586_28145 PF00360 Phytochrome region AM586_28160 PF03707 Bacterial signalling protein N terminal repeat AM586_28160 PF00563 EAL domain AM586_28160 PF00990 Diguanylate cyclase, GGDEF domain AM586_28170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28170 PF00512 His Kinase A (phospho-acceptor) domain AM586_28170 PF02702 Osmosensitive K+ channel His kinase sensor domain AM586_28170 PF13493 Domain of unknown function (DUF4118) AM586_28180 PF00990 Diguanylate cyclase, GGDEF domain AM586_28180 PF03707 Bacterial signalling protein N terminal repeat AM586_28180 PF00563 EAL domain AM586_28195 PF00990 Diguanylate cyclase, GGDEF domain AM586_28195 PF13188 PAS domain AM586_28195 PF03707 Bacterial signalling protein N terminal repeat AM586_28195 PF00563 EAL domain AM586_28200 PF00561 alpha/beta hydrolase fold AM586_28220 PF03707 Bacterial signalling protein N terminal repeat AM586_28220 PF00563 EAL domain AM586_28220 PF00990 Diguanylate cyclase, GGDEF domain AM586_28230 PF03707 Bacterial signalling protein N terminal repeat AM586_28230 PF00990 Diguanylate cyclase, GGDEF domain AM586_28230 PF00563 EAL domain AM586_28250 PF00672 HAMP domain AM586_28250 PF00072 Response regulator receiver domain AM586_28250 PF01627 Hpt domain AM586_28250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28250 PF17149 Periplasmic sensor domain found in signal transduction proteins AM586_28250 PF00512 His Kinase A (phospho-acceptor) domain AM586_28255 PF00563 EAL domain AM586_28255 PF00990 Diguanylate cyclase, GGDEF domain AM586_28255 PF03707 Bacterial signalling protein N terminal repeat AM586_28260 PF00563 EAL domain AM586_28260 PF03707 Bacterial signalling protein N terminal repeat AM586_28260 PF00990 Diguanylate cyclase, GGDEF domain AM586_28290 PF03707 Bacterial signalling protein N terminal repeat AM586_28290 PF00990 Diguanylate cyclase, GGDEF domain AM586_28290 PF00563 EAL domain AM586_28295 PF03707 Bacterial signalling protein N terminal repeat AM586_28295 PF00990 Diguanylate cyclase, GGDEF domain AM586_28295 PF00563 EAL domain AM586_28305 PF00072 Response regulator receiver domain AM586_28310 PF00072 Response regulator receiver domain AM586_28310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM586_28310 PF00512 His Kinase A (phospho-acceptor) domain AM586_28310 PF00989 PAS fold AM586_28310 PF01627 Hpt domain AM586_28310 PF00497 Bacterial extracellular solute-binding proteins, family 3