locus-tag class description MsedC_0003 PF03061 Thioesterase superfamily MsedC_0004 PF00293 NUDIX domain MsedC_0004 PF01467 Cytidylyltransferase-like MsedC_0007 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF MsedC_0007 PF01189 16S rRNA methyltransferase RsmB/F MsedC_0007 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MsedC_0010 PF01230 HIT domain MsedC_0011 PF13291 ACT domain MsedC_0011 PF00291 Pyridoxal-phosphate dependent enzyme MsedC_0012 PF01817 Chorismate mutase type II MsedC_0012 PF01842 ACT domain MsedC_0012 PF00800 Prephenate dehydratase MsedC_0015 PF00709 Adenylosuccinate synthetase MsedC_0018 PF10397 Adenylosuccinate lyase C-terminus MsedC_0018 PF00206 Lyase MsedC_0021 PF06463 Molybdenum Cofactor Synthesis C MsedC_0021 PF04055 Radical SAM superfamily MsedC_0022 PF01872 RibD C-terminal domain MsedC_0022 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MsedC_0024 PF00156 Phosphoribosyl transferase domain MsedC_0025 PF02637 GatB domain MsedC_0025 PF02934 GatB/GatE catalytic domain MsedC_0026 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MsedC_0029 PF00334 Nucleoside diphosphate kinase MsedC_0030 PF11987 Translation-initiation factor 2 MsedC_0030 PF00009 Elongation factor Tu GTP binding domain MsedC_0030 PF04760 Translation initiation factor IF-2, N-terminal region MsedC_0031 PF03949 Malic enzyme, NAD binding domain MsedC_0031 PF00390 Malic enzyme, N-terminal domain MsedC_0033 PF04560 RNA polymerase Rpb2, domain 7 MsedC_0033 PF00562 RNA polymerase Rpb2, domain 6 MsedC_0033 PF10385 RNA polymerase beta subunit external 1 domain MsedC_0033 PF04565 RNA polymerase Rpb2, domain 3 MsedC_0033 PF04563 RNA polymerase beta subunit MsedC_0033 PF04561 RNA polymerase Rpb2, domain 2 MsedC_0034 PF04997 RNA polymerase Rpb1, domain 1 MsedC_0034 PF05000 RNA polymerase Rpb1, domain 4 MsedC_0034 PF04983 RNA polymerase Rpb1, domain 3 MsedC_0034 PF00623 RNA polymerase Rpb1, domain 2 MsedC_0034 PF04998 RNA polymerase Rpb1, domain 5 MsedC_0035 PF04983 RNA polymerase Rpb1, domain 3 MsedC_0035 PF05000 RNA polymerase Rpb1, domain 4 MsedC_0035 PF04997 RNA polymerase Rpb1, domain 1 MsedC_0035 PF00623 RNA polymerase Rpb1, domain 2 MsedC_0035 PF04998 RNA polymerase Rpb1, domain 5 MsedC_0036 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MsedC_0037 PF08529 NusA N-terminal domain MsedC_0037 PF00575 S1 RNA binding domain MsedC_0037 PF13184 NusA-like KH domain MsedC_0040 PF00177 Ribosomal protein S7p/S5e MsedC_0041 PF00009 Elongation factor Tu GTP binding domain MsedC_0042 PF00338 Ribosomal protein S10p/S20e MsedC_0044 PF07685 CobB/CobQ-like glutamine amidotransferase domain MsedC_0044 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MsedC_0047 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MsedC_0047 PF00925 GTP cyclohydrolase II MsedC_0049 PF00885 6,7-dimethyl-8-ribityllumazine synthase MsedC_0051 PF01979 Amidohydrolase family MsedC_0055 PF00271 Helicase conserved C-terminal domain MsedC_0055 PF08494 DEAD/H associated MsedC_0055 PF00270 DEAD/DEAH box helicase MsedC_0057 PF16198 tRNA pseudouridylate synthase B C-terminal domain MsedC_0057 PF01509 TruB family pseudouridylate synthase (N terminal domain) MsedC_0057 PF08068 DKCLD (NUC011) domain MsedC_0057 PF09142 tRNA Pseudouridine synthase II, C terminal MsedC_0058 PF09157 Pseudouridine synthase II TruB, C-terminal MsedC_0058 PF16198 tRNA pseudouridylate synthase B C-terminal domain MsedC_0058 PF01509 TruB family pseudouridylate synthase (N terminal domain) MsedC_0059 PF05175 Methyltransferase small domain MsedC_0069 PF00398 Ribosomal RNA adenine dimethylase MsedC_0071 PF00588 SpoU rRNA Methylase family MsedC_0073 PF00132 Bacterial transferase hexapeptide (six repeats) MsedC_0073 PF12804 MobA-like NTP transferase domain MsedC_0073 PF14602 Hexapeptide repeat of succinyl-transferase MsedC_0074 PF01926 50S ribosome-binding GTPase MsedC_0074 PF06071 Protein of unknown function (DUF933) MsedC_0082 PF03725 3' exoribonuclease family, domain 2 MsedC_0082 PF01138 3' exoribonuclease family, domain 1 MsedC_0083 PF03725 3' exoribonuclease family, domain 2 MsedC_0083 PF01138 3' exoribonuclease family, domain 1 MsedC_0088 PF14492 Elongation Factor G, domain II MsedC_0088 PF03144 Elongation factor Tu domain 2 MsedC_0088 PF00009 Elongation factor Tu GTP binding domain MsedC_0088 PF03764 Elongation factor G, domain IV MsedC_0088 PF00679 Elongation factor G C-terminus MsedC_0089 PF13419 Haloacid dehalogenase-like hydrolase MsedC_0092 PF00180 Isocitrate/isopropylmalate dehydrogenase MsedC_0093 PF08264 Anticodon-binding domain of tRNA MsedC_0093 PF00133 tRNA synthetases class I (I, L, M and V) MsedC_0095 PF00297 Ribosomal protein L3 MsedC_0097 PF00276 Ribosomal protein L23 MsedC_0098 PF00181 Ribosomal Proteins L2, RNA binding domain MsedC_0098 PF03947 Ribosomal Proteins L2, C-terminal domain MsedC_0099 PF00203 Ribosomal protein S19 MsedC_0100 PF00237 Ribosomal protein L22p/L17e MsedC_0101 PF00189 Ribosomal protein S3, C-terminal domain MsedC_0101 PF07650 KH domain MsedC_0102 PF00831 Ribosomal L29 protein MsedC_0104 PF00366 Ribosomal protein S17 MsedC_0105 PF00238 Ribosomal protein L14p/L23e MsedC_0106 PF00467 KOW motif MsedC_0106 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MsedC_0108 PF00673 ribosomal L5P family C-terminus MsedC_0108 PF00281 Ribosomal protein L5 MsedC_0109 PF00410 Ribosomal protein S8 MsedC_0110 PF00347 Ribosomal protein L6 MsedC_0114 PF03719 Ribosomal protein S5, C-terminal domain MsedC_0114 PF00333 Ribosomal protein S5, N-terminal domain MsedC_0116 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MsedC_0121 PF02224 Cytidylate kinase MsedC_0134 PF00534 Glycosyl transferases group 1 MsedC_0150 PF04127 DNA / pantothenate metabolism flavoprotein MsedC_0150 PF02441 Flavoprotein MsedC_0151 PF00583 Acetyltransferase (GNAT) family MsedC_0154 PF02785 Biotin carboxylase C-terminal domain MsedC_0154 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MsedC_0154 PF00289 Biotin carboxylase, N-terminal domain MsedC_0157 PF04675 DNA ligase N terminus MsedC_0157 PF04679 ATP dependent DNA ligase C terminal region MsedC_0157 PF01068 ATP dependent DNA ligase domain MsedC_0158 PF00692 dUTPase MsedC_0161 PF01871 AMMECR1 MsedC_0171 PF02774 Semialdehyde dehydrogenase, dimerisation domain MsedC_0171 PF01118 Semialdehyde dehydrogenase, NAD binding domain MsedC_0172 PF00696 Amino acid kinase family MsedC_0175 PF08443 RimK-like ATP-grasp domain MsedC_0176 PF00202 Aminotransferase class-III MsedC_0178 PF01255 Putative undecaprenyl diphosphate synthase MsedC_0181 PF01370 NAD dependent epimerase/dehydratase family MsedC_0189 PF00005 ABC transporter MsedC_0190 PF03458 UPF0126 domain MsedC_0195 PF02581 Thiamine monophosphate synthase MsedC_0195 PF08543 Phosphomethylpyrimidine kinase MsedC_0196 PF00294 pfkB family carbohydrate kinase MsedC_0197 PF12706 Beta-lactamase superfamily domain MsedC_0197 PF00753 Metallo-beta-lactamase superfamily MsedC_0200 PF00557 Metallopeptidase family M24 MsedC_0200 PF01321 Creatinase/Prolidase N-terminal domain MsedC_0201 PF00392 Bacterial regulatory proteins, gntR family MsedC_0201 PF00155 Aminotransferase class I and II MsedC_0202 PF02423 Ornithine cyclodeaminase/mu-crystallin family MsedC_0205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_0205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_0207 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_0207 PF00107 Zinc-binding dehydrogenase MsedC_0208 PF03186 CobD/Cbib protein MsedC_0210 PF07685 CobB/CobQ-like glutamine amidotransferase domain MsedC_0210 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain MsedC_0211 PF00117 Glutamine amidotransferase class-I MsedC_0211 PF02540 NAD synthase MsedC_0211 PF00958 GMP synthase C terminal domain MsedC_0212 PF00205 Thiamine pyrophosphate enzyme, central domain MsedC_0212 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_0212 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MsedC_0215 PF00152 tRNA synthetases class II (D, K and N) MsedC_0215 PF01336 OB-fold nucleic acid binding domain MsedC_0216 PF01142 tRNA pseudouridine synthase D (TruD) MsedC_0219 PF06480 FtsH Extracellular MsedC_0219 PF01434 Peptidase family M41 MsedC_0219 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_0219 PF17862 AAA+ lid domain MsedC_0221 PF01367 5'-3' exonuclease, C-terminal SAM fold MsedC_0221 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MsedC_0222 PF14824 Sirohaem biosynthesis protein central MsedC_0222 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_0222 PF10414 Sirohaem synthase dimerisation region MsedC_0223 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MsedC_0223 PF01488 Shikimate / quinate 5-dehydrogenase MsedC_0223 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MsedC_0224 PF00490 Delta-aminolevulinic acid dehydratase MsedC_0225 PF00202 Aminotransferase class-III MsedC_0226 PF03900 Porphobilinogen deaminase, C-terminal domain MsedC_0226 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MsedC_0231 PF01266 FAD dependent oxidoreductase MsedC_0232 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MsedC_0232 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MsedC_0232 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MsedC_0232 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MsedC_0236 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MsedC_0237 PF06418 CTP synthase N-terminus MsedC_0237 PF00117 Glutamine amidotransferase class-I MsedC_0240 PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) MsedC_0246 PF01380 SIS domain MsedC_0247 PF01791 DeoC/LacD family aldolase MsedC_0249 PF00478 IMP dehydrogenase / GMP reductase domain MsedC_0249 PF00571 CBS domain MsedC_0250 PF00483 Nucleotidyl transferase MsedC_0251 PF16363 GDP-mannose 4,6 dehydratase MsedC_0252 PF01435 Peptidase family M48 MsedC_0256 PF17176 tRNA-binding domain MsedC_0256 PF05127 Helicase MsedC_0256 PF13718 GNAT acetyltransferase 2 MsedC_0256 PF08351 Domain of unknown function (DUF1726) MsedC_0262 PF00005 ABC transporter MsedC_0263 PF00582 Universal stress protein family MsedC_0265 PF07690 Major Facilitator Superfamily MsedC_0266 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MsedC_0266 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MsedC_0267 PF05127 Helicase MsedC_0267 PF08351 Domain of unknown function (DUF1726) MsedC_0267 PF13718 GNAT acetyltransferase 2 MsedC_0267 PF17176 tRNA-binding domain MsedC_0282 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_0282 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_0282 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_0283 PF03061 Thioesterase superfamily MsedC_0284 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_0284 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_0284 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_0285 PF00202 Aminotransferase class-III MsedC_0286 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_0286 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_0286 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_0287 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_0287 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_0288 PF03972 MmgE/PrpD family MsedC_0290 PF00478 IMP dehydrogenase / GMP reductase domain MsedC_0290 PF00571 CBS domain MsedC_0291 PF00285 Citrate synthase, C-terminal domain MsedC_0300 PF00115 Cytochrome C and Quinol oxidase polypeptide I MsedC_0301 PF00033 Cytochrome b/b6/petB MsedC_0305 PF02754 Cysteine-rich domain MsedC_0305 PF13183 4Fe-4S dicluster domain MsedC_0306 PF02915 Rubrerythrin MsedC_0308 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_0308 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_0309 PF00111 2Fe-2S iron-sulfur cluster binding domain MsedC_0309 PF01799 [2Fe-2S] binding domain MsedC_0310 PF03450 CO dehydrogenase flavoprotein C-terminal domain MsedC_0310 PF00941 FAD binding domain in molybdopterin dehydrogenase MsedC_0311 PF01433 Peptidase family M1 domain MsedC_0311 PF11838 ERAP1-like C-terminal domain MsedC_0316 PF13247 4Fe-4S dicluster domain MsedC_0316 PF12800 4Fe-4S binding domain MsedC_0317 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MsedC_0319 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MsedC_0319 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MsedC_0320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_0323 PF07690 Major Facilitator Superfamily MsedC_0332 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MsedC_0332 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MsedC_0333 PF00032 Cytochrome b(C-terminal)/b6/petD MsedC_0333 PF00033 Cytochrome b/b6/petB MsedC_0336 PF00115 Cytochrome C and Quinol oxidase polypeptide I MsedC_0343 PF01012 Electron transfer flavoprotein domain MsedC_0344 PF01012 Electron transfer flavoprotein domain MsedC_0344 PF00766 Electron transfer flavoprotein FAD-binding domain MsedC_0345 PF01494 FAD binding domain MsedC_0348 PF00378 Enoyl-CoA hydratase/isomerase MsedC_0355 PF05167 Uncharacterised ACR (DUF711) MsedC_0356 PF02074 Carboxypeptidase Taq (M32) metallopeptidase MsedC_0362 PF00005 ABC transporter MsedC_0362 PF13732 Domain of unknown function (DUF4162) MsedC_0365 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0368 PF00581 Rhodanese-like domain MsedC_0371 PF00578 AhpC/TSA family MsedC_0374 PF00174 Oxidoreductase molybdopterin binding domain MsedC_0379 PF00171 Aldehyde dehydrogenase family MsedC_0381 PF16123 Hydroxyacylglutathione hydrolase C-terminus MsedC_0381 PF00753 Metallo-beta-lactamase superfamily MsedC_0385 PF01206 Sulfurtransferase TusA MsedC_0393 PF03328 HpcH/HpaI aldolase/citrate lyase family MsedC_0396 PF00378 Enoyl-CoA hydratase/isomerase MsedC_0397 PF00378 Enoyl-CoA hydratase/isomerase MsedC_0398 PF02803 Thiolase, C-terminal domain MsedC_0398 PF00108 Thiolase, N-terminal domain MsedC_0400 PF00501 AMP-binding enzyme MsedC_0400 PF14535 AMP-binding enzyme C-terminal domain MsedC_0401 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MsedC_0401 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MsedC_0406 PF13193 AMP-binding enzyme C-terminal domain MsedC_0406 PF00501 AMP-binding enzyme MsedC_0407 PF00326 Prolyl oligopeptidase family MsedC_0407 PF07676 WD40-like Beta Propeller Repeat MsedC_0408 PF00108 Thiolase, N-terminal domain MsedC_0408 PF02803 Thiolase, C-terminal domain MsedC_0410 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_0411 PF00378 Enoyl-CoA hydratase/isomerase MsedC_0412 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_0412 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_0412 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_0413 PF00501 AMP-binding enzyme MsedC_0413 PF13193 AMP-binding enzyme C-terminal domain MsedC_0418 PF13193 AMP-binding enzyme C-terminal domain MsedC_0418 PF00501 AMP-binding enzyme MsedC_0419 PF07690 Major Facilitator Superfamily MsedC_0420 PF13520 Amino acid permease MsedC_0427 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0427 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MsedC_0435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MsedC_0435 PF00384 Molybdopterin oxidoreductase MsedC_0435 PF01568 Molydopterin dinucleotide binding domain MsedC_0437 PF01569 PAP2 superfamily MsedC_0438 PF07690 Major Facilitator Superfamily MsedC_0440 PF03358 NADPH-dependent FMN reductase MsedC_0442 PF00857 Isochorismatase family MsedC_0443 PF00391 PEP-utilising enzyme, mobile domain MsedC_0443 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MsedC_0448 PF02913 FAD linked oxidases, C-terminal domain MsedC_0448 PF01565 FAD binding domain MsedC_0455 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_0456 PF12911 N-terminal TM domain of oligopeptide transport permease C MsedC_0456 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_0457 PF00005 ABC transporter MsedC_0457 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_0458 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_0458 PF00005 ABC transporter MsedC_0464 PF00248 Aldo/keto reductase family MsedC_0465 PF10609 NUBPL iron-transfer P-loop NTPase MsedC_0467 PF00056 lactate/malate dehydrogenase, NAD binding domain MsedC_0467 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MsedC_0469 PF07690 Major Facilitator Superfamily MsedC_0475 PF00083 Sugar (and other) transporter MsedC_0475 PF07690 Major Facilitator Superfamily MsedC_0476 PF00083 Sugar (and other) transporter MsedC_0477 PF00107 Zinc-binding dehydrogenase MsedC_0477 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_0478 PF03069 Acetamidase/Formamidase family MsedC_0480 PF00083 Sugar (and other) transporter MsedC_0483 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_0483 PF01434 Peptidase family M41 MsedC_0483 PF06480 FtsH Extracellular MsedC_0483 PF17862 AAA+ lid domain MsedC_0499 PF00571 CBS domain MsedC_0500 PF14759 Reductase C-terminal MsedC_0500 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0503 PF00403 Heavy-metal-associated domain MsedC_0505 PF07687 Peptidase dimerisation domain MsedC_0505 PF01546 Peptidase family M20/M25/M40 MsedC_0508 PF00491 Arginase family MsedC_0511 PF00033 Cytochrome b/b6/petB MsedC_0511 PF00032 Cytochrome b(C-terminal)/b6/petD MsedC_0516 PF00689 Cation transporting ATPase, C-terminus MsedC_0516 PF00690 Cation transporter/ATPase, N-terminus MsedC_0520 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MsedC_0520 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MsedC_0521 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_0522 PF13186 Iron-sulfur cluster-binding domain MsedC_0522 PF04055 Radical SAM superfamily MsedC_0523 PF04055 Radical SAM superfamily MsedC_0523 PF13186 Iron-sulfur cluster-binding domain MsedC_0524 PF00753 Metallo-beta-lactamase superfamily MsedC_0532 PF00005 ABC transporter MsedC_0535 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_0536 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MsedC_0536 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MsedC_0536 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MsedC_0538 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_0538 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_0542 PF00795 Carbon-nitrogen hydrolase MsedC_0544 PF00850 Histone deacetylase domain MsedC_0545 PF02222 ATP-grasp domain MsedC_0553 PF00994 Probable molybdopterin binding domain MsedC_0556 PF00270 DEAD/DEAH box helicase MsedC_0556 PF09369 Domain of unknown function (DUF1998) MsedC_0556 PF00271 Helicase conserved C-terminal domain MsedC_0557 PF06508 Queuosine biosynthesis protein QueC MsedC_0562 PF02913 FAD linked oxidases, C-terminal domain MsedC_0562 PF01565 FAD binding domain MsedC_0563 PF01565 FAD binding domain MsedC_0563 PF02913 FAD linked oxidases, C-terminal domain MsedC_0566 PF13614 AAA domain MsedC_0569 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0570 PF00483 Nucleotidyl transferase MsedC_0570 PF00132 Bacterial transferase hexapeptide (six repeats) MsedC_0579 PF00005 ABC transporter MsedC_0581 PF00115 Cytochrome C and Quinol oxidase polypeptide I MsedC_0584 PF08264 Anticodon-binding domain of tRNA MsedC_0584 PF00133 tRNA synthetases class I (I, L, M and V) MsedC_0584 PF13603 Leucyl-tRNA synthetase, Domain 2 MsedC_0584 PF09334 tRNA synthetases class I (M) MsedC_0586 PF01433 Peptidase family M1 domain MsedC_0586 PF11838 ERAP1-like C-terminal domain MsedC_0587 PF01189 16S rRNA methyltransferase RsmB/F MsedC_0587 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF MsedC_0587 PF01029 NusB family MsedC_0592 PF13419 Haloacid dehalogenase-like hydrolase MsedC_0594 PF00271 Helicase conserved C-terminal domain MsedC_0594 PF00270 DEAD/DEAH box helicase MsedC_0594 PF17191 RecG wedge domain MsedC_0607 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_0607 PF01434 Peptidase family M41 MsedC_0607 PF06480 FtsH Extracellular MsedC_0607 PF17862 AAA+ lid domain MsedC_0608 PF00294 pfkB family carbohydrate kinase MsedC_0609 PF11798 IMS family HHH motif MsedC_0609 PF00817 impB/mucB/samB family MsedC_0609 PF11799 impB/mucB/samB family C-terminal domain MsedC_0611 PF05189 RNA 3'-terminal phosphate cyclase (RTC), insert domain MsedC_0611 PF01137 RNA 3'-terminal phosphate cyclase MsedC_0612 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_0612 PF00107 Zinc-binding dehydrogenase MsedC_0613 PF00120 Glutamine synthetase, catalytic domain MsedC_0613 PF03951 Glutamine synthetase, beta-Grasp domain MsedC_0620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_0620 PF10414 Sirohaem synthase dimerisation region MsedC_0620 PF14824 Sirohaem biosynthesis protein central MsedC_0621 PF03450 CO dehydrogenase flavoprotein C-terminal domain MsedC_0621 PF00941 FAD binding domain in molybdopterin dehydrogenase MsedC_0622 PF00111 2Fe-2S iron-sulfur cluster binding domain MsedC_0622 PF01799 [2Fe-2S] binding domain MsedC_0623 PF12804 MobA-like NTP transferase domain MsedC_0623 PF00132 Bacterial transferase hexapeptide (six repeats) MsedC_0623 PF14602 Hexapeptide repeat of succinyl-transferase MsedC_0627 PF02548 Ketopantoate hydroxymethyltransferase MsedC_0629 PF00005 ABC transporter MsedC_0634 PF12706 Beta-lactamase superfamily domain MsedC_0635 PF00682 HMGL-like MsedC_0635 PF08502 LeuA allosteric (dimerisation) domain MsedC_0641 PF01242 6-pyruvoyl tetrahydropterin synthase MsedC_0644 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0645 PF00459 Inositol monophosphatase family MsedC_0646 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_0646 PF17862 AAA+ lid domain MsedC_0646 PF06480 FtsH Extracellular MsedC_0646 PF01434 Peptidase family M41 MsedC_0652 PF00011 Hsp20/alpha crystallin family MsedC_0654 PF09107 Elongation factor SelB, winged helix MsedC_0654 PF09105 Elongation factor SelB, winged helix MsedC_0654 PF03144 Elongation factor Tu domain 2 MsedC_0654 PF00009 Elongation factor Tu GTP binding domain MsedC_0654 PF09106 Elongation factor SelB, winged helix MsedC_0658 PF08543 Phosphomethylpyrimidine kinase MsedC_0660 PF00719 Inorganic pyrophosphatase MsedC_0662 PF00437 Type II/IV secretion system protein MsedC_0668 PF00108 Thiolase, N-terminal domain MsedC_0668 PF02803 Thiolase, C-terminal domain MsedC_0669 PF04055 Radical SAM superfamily MsedC_0669 PF01938 TRAM domain MsedC_0669 PF00919 Uncharacterized protein family UPF0004 MsedC_0673 PF01351 Ribonuclease HII MsedC_0679 PF00092 von Willebrand factor type A domain MsedC_0680 PF07728 AAA domain (dynein-related subfamily) MsedC_0680 PF17868 AAA lid domain MsedC_0680 PF12592 Protein of unknown function (DUF3763) MsedC_0683 PF03454 MoeA C-terminal region (domain IV) MsedC_0683 PF03453 MoeA N-terminal region (domain I and II) MsedC_0683 PF00994 Probable molybdopterin binding domain MsedC_0684 PF08544 GHMP kinases C terminal MsedC_0684 PF00288 GHMP kinases N terminal domain MsedC_0685 PF01053 Cys/Met metabolism PLP-dependent enzyme MsedC_0688 PF13085 2Fe-2S iron-sulfur cluster binding domain MsedC_0688 PF13183 4Fe-4S dicluster domain MsedC_0689 PF00890 FAD binding domain MsedC_0689 PF02910 Fumarate reductase flavoprotein C-term MsedC_0690 PF13344 Haloacid dehalogenase-like hydrolase MsedC_0697 PF01112 Asparaginase MsedC_0699 PF01494 FAD binding domain MsedC_0701 PF01048 Phosphorylase superfamily MsedC_0703 PF00348 Polyprenyl synthetase MsedC_0704 PF08443 RimK-like ATP-grasp domain MsedC_0704 PF18030 RimK PreATP-grasp domain MsedC_0705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_0706 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_0707 PF01145 SPFH domain / Band 7 family MsedC_0712 PF01329 Pterin 4 alpha carbinolamine dehydratase MsedC_0715 PF00180 Isocitrate/isopropylmalate dehydrogenase MsedC_0717 PF09286 Pro-kumamolisin, activation domain MsedC_0717 PF04151 Bacterial pre-peptidase C-terminal domain MsedC_0721 PF01118 Semialdehyde dehydrogenase, NAD binding domain MsedC_0721 PF02774 Semialdehyde dehydrogenase, dimerisation domain MsedC_0723 PF00920 Dehydratase family MsedC_0724 PF01625 Peptide methionine sulfoxide reductase MsedC_0728 PF02540 NAD synthase MsedC_0732 PF01209 ubiE/COQ5 methyltransferase family MsedC_0733 PF03167 Uracil DNA glycosylase superfamily MsedC_0734 PF03266 NTPase MsedC_0737 PF00293 NUDIX domain MsedC_0740 PF01230 HIT domain MsedC_0741 PF01565 FAD binding domain MsedC_0741 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MsedC_0746 PF13419 Haloacid dehalogenase-like hydrolase MsedC_0749 PF02277 Phosphoribosyltransferase MsedC_0751 PF00266 Aminotransferase class-V MsedC_0754 PF01513 ATP-NAD kinase MsedC_0757 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_0763 PF00156 Phosphoribosyl transferase domain MsedC_0769 PF01425 Amidase MsedC_0770 PF14010 Phosphoenolpyruvate carboxylase MsedC_0771 PF00578 AhpC/TSA family MsedC_0772 PF03853 YjeF-related protein N-terminus MsedC_0772 PF01256 Carbohydrate kinase MsedC_0776 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system MsedC_0781 PF00571 CBS domain MsedC_0781 PF00478 IMP dehydrogenase / GMP reductase domain MsedC_0782 PF01475 Ferric uptake regulator family MsedC_0783 PF01156 Inosine-uridine preferring nucleoside hydrolase MsedC_0786 PF00478 IMP dehydrogenase / GMP reductase domain MsedC_0786 PF00571 CBS domain MsedC_0791 PF00085 Thioredoxin MsedC_0797 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_0797 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_0802 PF03190 Protein of unknown function, DUF255 MsedC_0808 PF02416 mttA/Hcf106 family MsedC_0810 PF00902 Sec-independent protein translocase protein (TatC) MsedC_0812 PF01037 Lrp/AsnC ligand binding domain MsedC_0819 PF13360 PQQ-like domain MsedC_0819 PF13570 PQQ-like domain MsedC_0819 PF01011 PQQ enzyme repeat MsedC_0821 PF01032 FecCD transport family MsedC_0829 PF01568 Molydopterin dinucleotide binding domain MsedC_0829 PF00384 Molybdopterin oxidoreductase MsedC_0830 PF13247 4Fe-4S dicluster domain MsedC_0830 PF12800 4Fe-4S binding domain MsedC_0843 PF00266 Aminotransferase class-V MsedC_0845 PF00694 Aconitase C-terminal domain MsedC_0846 PF00330 Aconitase family (aconitate hydratase) MsedC_0848 PF03793 PASTA domain MsedC_0848 PF00069 Protein kinase domain MsedC_0852 PF01769 Divalent cation transporter MsedC_0852 PF03448 MgtE intracellular N domain MsedC_0852 PF00571 CBS domain MsedC_0853 PF01131 DNA topoisomerase MsedC_0853 PF01751 Toprim domain MsedC_0855 PF00753 Metallo-beta-lactamase superfamily MsedC_0864 PF00005 ABC transporter MsedC_0867 PF00082 Subtilase family MsedC_0867 PF09286 Pro-kumamolisin, activation domain MsedC_0868 PF07690 Major Facilitator Superfamily MsedC_0876 PF07690 Major Facilitator Superfamily MsedC_0882 PF00083 Sugar (and other) transporter MsedC_0884 PF03551 Transcriptional regulator PadR-like family MsedC_0885 PF00005 ABC transporter MsedC_0887 PF04343 Protein of unknown function, DUF488 MsedC_0894 PF08379 Bacterial transglutaminase-like N-terminal region MsedC_0894 PF01841 Transglutaminase-like superfamily MsedC_0895 PF14403 Circularly permuted ATP-grasp type 2 MsedC_0897 PF07690 Major Facilitator Superfamily MsedC_0898 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MsedC_0898 PF00384 Molybdopterin oxidoreductase MsedC_0898 PF01568 Molydopterin dinucleotide binding domain MsedC_0900 PF02492 CobW/HypB/UreG, nucleotide-binding domain MsedC_0903 PF01979 Amidohydrolase family MsedC_0903 PF00449 Urease alpha-subunit, N-terminal domain MsedC_0904 PF00699 Urease beta subunit MsedC_0904 PF00547 Urease, gamma subunit MsedC_0905 PF13520 Amino acid permease MsedC_0906 PF12706 Beta-lactamase superfamily domain MsedC_0908 PF00392 Bacterial regulatory proteins, gntR family MsedC_0908 PF00155 Aminotransferase class I and II MsedC_0919 PF01545 Cation efflux family MsedC_0921 PF00107 Zinc-binding dehydrogenase MsedC_0921 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_0922 PF01964 Radical SAM ThiC family MsedC_0923 PF07690 Major Facilitator Superfamily MsedC_0927 PF16338 Domain of unknown function (DUF4968) MsedC_0927 PF01055 Glycosyl hydrolases family 31 MsedC_0927 PF13802 Galactose mutarotase-like MsedC_0927 PF17137 Domain of unknown function (DUF5110) MsedC_0928 PF18390 Glycogen debranching enzyme C-terminal domain MsedC_0928 PF00128 Alpha amylase, catalytic domain MsedC_0928 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) MsedC_0930 PF10609 NUBPL iron-transfer P-loop NTPase MsedC_0931 PF01300 Telomere recombination MsedC_0931 PF00708 Acylphosphatase MsedC_0931 PF07503 HypF finger MsedC_0931 PF17788 HypF Kae1-like domain MsedC_0932 PF01750 Hydrogenase maturation protease MsedC_0935 PF04055 Radical SAM superfamily MsedC_0935 PF13186 Iron-sulfur cluster-binding domain MsedC_0939 PF00374 Nickel-dependent hydrogenase MsedC_0940 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MsedC_0940 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MsedC_0942 PF01638 HxlR-like helix-turn-helix MsedC_0945 PF00596 Class II Aldolase and Adducin N-terminal domain MsedC_0946 PF01924 Hydrogenase formation hypA family MsedC_0947 PF01455 HupF/HypC family MsedC_0949 PF00586 AIR synthase related protein, N-terminal domain MsedC_0949 PF02769 AIR synthase related protein, C-terminal domain MsedC_0954 PF03190 Protein of unknown function, DUF255 MsedC_0959 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal MsedC_0959 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MsedC_0959 PF10518 TAT (twin-arginine translocation) pathway signal sequence MsedC_0970 PF00586 AIR synthase related protein, N-terminal domain MsedC_0970 PF02769 AIR synthase related protein, C-terminal domain MsedC_0975 PF10414 Sirohaem synthase dimerisation region MsedC_0975 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_0976 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MsedC_0976 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MsedC_0977 PF01507 Phosphoadenosine phosphosulfate reductase family MsedC_0978 PF14306 PUA-like domain MsedC_0978 PF01747 ATP-sulfurylase MsedC_0981 PF00127 Copper binding proteins, plastocyanin/azurin family MsedC_0991 PF03807 NADP oxidoreductase coenzyme F420-dependent MsedC_0991 PF14748 Pyrroline-5-carboxylate reductase dimerisation MsedC_0994 PF02223 Thymidylate kinase MsedC_0995 PF02541 Ppx/GppA phosphatase family MsedC_0996 PF00300 Histidine phosphatase superfamily (branch 1) MsedC_1002 PF00723 Glycosyl hydrolases family 15 MsedC_1006 PF00083 Sugar (and other) transporter MsedC_1007 PF01613 Flavin reductase like domain MsedC_1008 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MsedC_1009 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MsedC_1009 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MsedC_1014 PF07690 Major Facilitator Superfamily MsedC_1016 PF01728 FtsJ-like methyltransferase MsedC_1018 PF01022 Bacterial regulatory protein, arsR family MsedC_1019 PF01156 Inosine-uridine preferring nucleoside hydrolase MsedC_1023 PF04185 Phosphoesterase family MsedC_1023 PF05506 Domain of unknown function (DUF756) MsedC_1024 PF02673 Bacitracin resistance protein BacA MsedC_1025 PF01435 Peptidase family M48 MsedC_1026 PF00083 Sugar (and other) transporter MsedC_1028 PF13193 AMP-binding enzyme C-terminal domain MsedC_1028 PF00501 AMP-binding enzyme MsedC_1029 PF13173 AAA domain MsedC_1029 PF13635 Domain of unknown function (DUF4143) MsedC_1030 PF00582 Universal stress protein family MsedC_1035 PF12102 Domain of unknown function (DUF3578) MsedC_1035 PF07728 AAA domain (dynein-related subfamily) MsedC_1041 PF00069 Protein kinase domain MsedC_1047 PF00005 ABC transporter MsedC_1051 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_1051 PF00205 Thiamine pyrophosphate enzyme, central domain MsedC_1051 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MsedC_1052 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1054 PF02652 L-lactate permease MsedC_1060 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_1062 PF00005 ABC transporter MsedC_1062 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_1063 PF00005 ABC transporter MsedC_1063 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_1067 PF03949 Malic enzyme, NAD binding domain MsedC_1067 PF00390 Malic enzyme, N-terminal domain MsedC_1068 PF07690 Major Facilitator Superfamily MsedC_1068 PF00083 Sugar (and other) transporter MsedC_1069 PF02585 GlcNAc-PI de-N-acetylase MsedC_1070 PF03737 Aldolase/RraA MsedC_1072 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MsedC_1072 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MsedC_1077 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase MsedC_1077 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MsedC_1081 PF00005 ABC transporter MsedC_1081 PF13732 Domain of unknown function (DUF4162) MsedC_1085 PF07859 alpha/beta hydrolase fold MsedC_1086 PF01593 Flavin containing amine oxidoreductase MsedC_1092 PF00578 AhpC/TSA family MsedC_1092 PF10417 C-terminal domain of 1-Cys peroxiredoxin MsedC_1101 PF13419 Haloacid dehalogenase-like hydrolase MsedC_1104 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_1104 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1105 PF05726 Pirin C-terminal cupin domain MsedC_1105 PF02678 Pirin MsedC_1107 PF00083 Sugar (and other) transporter MsedC_1108 PF07690 Major Facilitator Superfamily MsedC_1109 PF02146 Sir2 family MsedC_1110 PF01925 Sulfite exporter TauE/SafE MsedC_1115 PF05496 Holliday junction DNA helicase RuvB P-loop domain MsedC_1115 PF16193 AAA C-terminal domain MsedC_1115 PF01661 Macro domain MsedC_1115 PF12002 MgsA AAA+ ATPase C terminal MsedC_1116 PF13175 AAA ATPase domain MsedC_1122 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MsedC_1122 PF00205 Thiamine pyrophosphate enzyme, central domain MsedC_1122 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_1125 PF00239 Resolvase, N terminal domain MsedC_1126 PF13183 4Fe-4S dicluster domain MsedC_1126 PF13085 2Fe-2S iron-sulfur cluster binding domain MsedC_1129 PF02910 Fumarate reductase flavoprotein C-term MsedC_1129 PF00890 FAD binding domain MsedC_1130 PF05683 Fumarase C-terminus MsedC_1131 PF05681 Fumarate hydratase (Fumerase) MsedC_1132 PF00083 Sugar (and other) transporter MsedC_1133 PF01565 FAD binding domain MsedC_1133 PF02913 FAD linked oxidases, C-terminal domain MsedC_1134 PF00171 Aldehyde dehydrogenase family MsedC_1138 PF02615 Malate/L-lactate dehydrogenase MsedC_1139 PF08666 SAF domain MsedC_1140 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus MsedC_1141 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MsedC_1141 PF13378 Enolase C-terminal domain-like MsedC_1142 PF00392 Bacterial regulatory proteins, gntR family MsedC_1142 PF07729 FCD domain MsedC_1143 PF01968 Hydantoinase/oxoprolinase MsedC_1143 PF05378 Hydantoinase/oxoprolinase N-terminal region MsedC_1144 PF02538 Hydantoinase B/oxoprolinase MsedC_1152 PF03437 BtpA family MsedC_1157 PF18019 HD domain MsedC_1163 PF01867 CRISPR associated protein Cas1 MsedC_1177 PF03787 RAMP superfamily MsedC_1178 PF03787 RAMP superfamily MsedC_1185 PF01867 CRISPR associated protein Cas1 MsedC_1190 PF01804 Penicillin amidase MsedC_1191 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MsedC_1191 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_1191 PF00205 Thiamine pyrophosphate enzyme, central domain MsedC_1193 PF01266 FAD dependent oxidoreductase MsedC_1193 PF04324 BFD-like [2Fe-2S] binding domain MsedC_1194 PF03009 Glycerophosphoryl diester phosphodiesterase family MsedC_1195 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_1196 PF08402 TOBE domain MsedC_1196 PF00005 ABC transporter MsedC_1202 PF00924 Mechanosensitive ion channel MsedC_1202 PF05552 Conserved TM helix MsedC_1215 PF00437 Type II/IV secretion system protein MsedC_1217 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_1218 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MsedC_1218 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MsedC_1228 PF01037 Lrp/AsnC ligand binding domain MsedC_1229 PF00581 Rhodanese-like domain MsedC_1231 PF02780 Transketolase, C-terminal domain MsedC_1231 PF02779 Transketolase, pyrimidine binding domain MsedC_1232 PF00676 Dehydrogenase E1 component MsedC_1236 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain MsedC_1236 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain MsedC_1237 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_1237 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_1237 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_1239 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MsedC_1239 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MsedC_1241 PF07690 Major Facilitator Superfamily MsedC_1243 PF00501 AMP-binding enzyme MsedC_1243 PF13193 AMP-binding enzyme C-terminal domain MsedC_1246 PF00881 Nitroreductase family MsedC_1253 PF00005 ABC transporter MsedC_1255 PF06470 SMC proteins Flexible Hinge Domain MsedC_1255 PF02463 RecF/RecN/SMC N terminal domain MsedC_1257 PF01209 ubiE/COQ5 methyltransferase family MsedC_1261 PF00403 Heavy-metal-associated domain MsedC_1261 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1261 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_1262 PF02310 B12 binding domain MsedC_1262 PF04055 Radical SAM superfamily MsedC_1267 PF01012 Electron transfer flavoprotein domain MsedC_1267 PF00766 Electron transfer flavoprotein FAD-binding domain MsedC_1268 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1270 PF00571 CBS domain MsedC_1270 PF01380 SIS domain MsedC_1272 PF07690 Major Facilitator Superfamily MsedC_1274 PF04321 RmlD substrate binding domain MsedC_1284 PF01566 Natural resistance-associated macrophage protein MsedC_1287 PF01513 ATP-NAD kinase MsedC_1292 PF04055 Radical SAM superfamily MsedC_1299 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MsedC_1299 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MsedC_1299 PF11890 Domain of unknown function (DUF3410) MsedC_1300 PF04055 Radical SAM superfamily MsedC_1300 PF00919 Uncharacterized protein family UPF0004 MsedC_1300 PF18693 TRAM domain MsedC_1301 PF01738 Dienelactone hydrolase family MsedC_1302 PF00005 ABC transporter MsedC_1302 PF08402 TOBE domain MsedC_1303 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_1304 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_1308 PF13193 AMP-binding enzyme C-terminal domain MsedC_1308 PF00501 AMP-binding enzyme MsedC_1308 PF16177 Acetyl-coenzyme A synthetase N-terminus MsedC_1309 PF08450 SMP-30/Gluconolactonase/LRE-like region MsedC_1313 PF03109 ABC1 family MsedC_1316 PF00171 Aldehyde dehydrogenase family MsedC_1318 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain MsedC_1318 PF00326 Prolyl oligopeptidase family MsedC_1320 PF04055 Radical SAM superfamily MsedC_1320 PF13186 Iron-sulfur cluster-binding domain MsedC_1321 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain MsedC_1321 PF13378 Enolase C-terminal domain-like MsedC_1322 PF02585 GlcNAc-PI de-N-acetylase MsedC_1323 PF03824 High-affinity nickel-transport protein MsedC_1327 PF00117 Glutamine amidotransferase class-I MsedC_1327 PF00958 GMP synthase C terminal domain MsedC_1327 PF02540 NAD synthase MsedC_1328 PF04199 Putative cyclase MsedC_1332 PF00578 AhpC/TSA family MsedC_1336 PF01568 Molydopterin dinucleotide binding domain MsedC_1336 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MsedC_1336 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MsedC_1336 PF00384 Molybdopterin oxidoreductase MsedC_1336 PF12838 4Fe-4S dicluster domain MsedC_1338 PF02634 FdhD/NarQ family MsedC_1339 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MsedC_1339 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MsedC_1340 PF00723 Glycosyl hydrolases family 15 MsedC_1343 PF00437 Type II/IV secretion system protein MsedC_1359 PF10609 NUBPL iron-transfer P-loop NTPase MsedC_1361 PF13614 AAA domain MsedC_1369 PF03070 TENA/THI-4/PQQC family MsedC_1370 PF01184 GPR1/FUN34/yaaH family MsedC_1371 PF13193 AMP-binding enzyme C-terminal domain MsedC_1371 PF00501 AMP-binding enzyme MsedC_1371 PF16177 Acetyl-coenzyme A synthetase N-terminus MsedC_1372 PF02151 UvrB/uvrC motif MsedC_1372 PF00271 Helicase conserved C-terminal domain MsedC_1372 PF04851 Type III restriction enzyme, res subunit MsedC_1372 PF17757 UvrB interaction domain MsedC_1372 PF12344 Ultra-violet resistance protein B MsedC_1376 PF01557 Fumarylacetoacetate (FAA) hydrolase family MsedC_1382 PF00958 GMP synthase C terminal domain MsedC_1382 PF00117 Glutamine amidotransferase class-I MsedC_1384 PF04493 Endonuclease V MsedC_1387 PF00082 Subtilase family MsedC_1387 PF09286 Pro-kumamolisin, activation domain MsedC_1392 PF00271 Helicase conserved C-terminal domain MsedC_1392 PF00270 DEAD/DEAH box helicase MsedC_1392 PF08148 DSHCT (NUC185) domain MsedC_1393 PF01039 Carboxyl transferase domain MsedC_1395 PF00005 ABC transporter MsedC_1396 PF00270 DEAD/DEAH box helicase MsedC_1396 PF00271 Helicase conserved C-terminal domain MsedC_1398 PF00005 ABC transporter MsedC_1398 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_1400 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_1405 PF13478 XdhC Rossmann domain MsedC_1405 PF02625 XdhC and CoxI family MsedC_1406 PF18389 TrmO C-terminal domain MsedC_1406 PF01980 tRNA-methyltransferase O MsedC_1418 PF02142 MGS-like domain MsedC_1418 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MsedC_1418 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MsedC_1419 PF00291 Pyridoxal-phosphate dependent enzyme MsedC_1420 PF10609 NUBPL iron-transfer P-loop NTPase MsedC_1422 PF01042 Endoribonuclease L-PSP MsedC_1425 PF02633 Creatinine amidohydrolase MsedC_1431 PF02887 Pyruvate kinase, alpha/beta domain MsedC_1431 PF00224 Pyruvate kinase, barrel domain MsedC_1433 PF01266 FAD dependent oxidoreductase MsedC_1436 PF00534 Glycosyl transferases group 1 MsedC_1436 PF08323 Starch synthase catalytic domain MsedC_1438 PF00483 Nucleotidyl transferase MsedC_1441 PF00501 AMP-binding enzyme MsedC_1441 PF14535 AMP-binding enzyme C-terminal domain MsedC_1442 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MsedC_1442 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MsedC_1443 PF00107 Zinc-binding dehydrogenase MsedC_1443 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_1445 PF00107 Zinc-binding dehydrogenase MsedC_1445 PF08240 Alcohol dehydrogenase GroES-like domain MsedC_1447 PF00361 Proton-conducting membrane transporter MsedC_1447 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MsedC_1448 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MsedC_1449 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MsedC_1450 PF00361 Proton-conducting membrane transporter MsedC_1453 PF03372 Endonuclease/Exonuclease/phosphatase family MsedC_1462 PF01209 ubiE/COQ5 methyltransferase family MsedC_1468 PF00731 AIR carboxylase MsedC_1469 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MsedC_1469 PF02222 ATP-grasp domain MsedC_1471 PF00121 Triosephosphate isomerase MsedC_1472 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain MsedC_1472 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain MsedC_1474 PF00753 Metallo-beta-lactamase superfamily MsedC_1475 PF13520 Amino acid permease MsedC_1476 PF00501 AMP-binding enzyme MsedC_1476 PF13193 AMP-binding enzyme C-terminal domain MsedC_1476 PF16177 Acetyl-coenzyme A synthetase N-terminus MsedC_1477 PF00384 Molybdopterin oxidoreductase MsedC_1477 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MsedC_1477 PF01568 Molydopterin dinucleotide binding domain MsedC_1482 PF10415 Fumarase C C-terminus MsedC_1482 PF00206 Lyase MsedC_1486 PF11870 Domain of unknown function (DUF3390) MsedC_1486 PF13183 4Fe-4S dicluster domain MsedC_1486 PF02589 LUD domain MsedC_1487 PF00330 Aconitase family (aconitate hydratase) MsedC_1487 PF00694 Aconitase C-terminal domain MsedC_1492 PF01144 Coenzyme A transferase MsedC_1494 PF00571 CBS domain MsedC_1494 PF00478 IMP dehydrogenase / GMP reductase domain MsedC_1500 PF03099 Biotin/lipoate A/B protein ligase family MsedC_1500 PF10437 Bacterial lipoate protein ligase C-terminus MsedC_1501 PF01597 Glycine cleavage H-protein MsedC_1503 PF17746 SfsA N-terminal OB domain MsedC_1503 PF03749 Sugar fermentation stimulation protein RE domain MsedC_1504 PF07687 Peptidase dimerisation domain MsedC_1504 PF01546 Peptidase family M20/M25/M40 MsedC_1508 PF01171 PP-loop family MsedC_1511 PF16697 Inner membrane component of T3SS, cytoplasmic domain MsedC_1515 PF00270 DEAD/DEAH box helicase MsedC_1515 PF00271 Helicase conserved C-terminal domain MsedC_1517 PF00474 Sodium:solute symporter family MsedC_1522 PF00999 Sodium/hydrogen exchanger family MsedC_1528 PF03099 Biotin/lipoate A/B protein ligase family MsedC_1530 PF04055 Radical SAM superfamily MsedC_1530 PF06968 Biotin and Thiamin Synthesis associated domain MsedC_1531 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1531 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_1534 PF00083 Sugar (and other) transporter MsedC_1535 PF07282 Putative transposase DNA-binding domain MsedC_1535 PF01385 Probable transposase MsedC_1535 PF12323 Helix-turn-helix domain MsedC_1544 PF00285 Citrate synthase, C-terminal domain MsedC_1547 PF00578 AhpC/TSA family MsedC_1547 PF10417 C-terminal domain of 1-Cys peroxiredoxin MsedC_1549 PF00857 Isochorismatase family MsedC_1550 PF00005 ABC transporter MsedC_1550 PF12704 MacB-like periplasmic core domain MsedC_1550 PF02687 FtsX-like permease family MsedC_1552 PF00005 ABC transporter MsedC_1561 PF00909 Ammonium Transporter Family MsedC_1564 PF02754 Cysteine-rich domain MsedC_1567 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1567 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_1570 PF01206 Sulfurtransferase TusA MsedC_1571 PF13686 DsrE/DsrF/DrsH-like family MsedC_1573 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_1573 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_1578 PF00850 Histone deacetylase domain MsedC_1582 PF03099 Biotin/lipoate A/B protein ligase family MsedC_1589 PF06508 Queuosine biosynthesis protein QueC MsedC_1591 PF01597 Glycine cleavage H-protein MsedC_1599 PF01966 HD domain MsedC_1600 PF01048 Phosphorylase superfamily MsedC_1603 PF02629 CoA binding domain MsedC_1603 PF00549 CoA-ligase MsedC_1604 PF00549 CoA-ligase MsedC_1604 PF08442 ATP-grasp domain MsedC_1607 PF03129 Anticodon binding domain MsedC_1607 PF02824 TGS domain MsedC_1607 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MsedC_1607 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MsedC_1608 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MsedC_1608 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MsedC_1612 PF00582 Universal stress protein family MsedC_1613 PF00534 Glycosyl transferases group 1 MsedC_1613 PF13439 Glycosyltransferase Family 4 MsedC_1619 PF01923 Cobalamin adenosyltransferase MsedC_1627 PF12706 Beta-lactamase superfamily domain MsedC_1627 PF17770 Ribonuclease J C-terminal domain MsedC_1627 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MsedC_1628 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MsedC_1628 PF02824 TGS domain MsedC_1628 PF03129 Anticodon binding domain MsedC_1628 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MsedC_1630 PF01380 SIS domain MsedC_1631 PF00483 Nucleotidyl transferase MsedC_1634 PF00291 Pyridoxal-phosphate dependent enzyme MsedC_1637 PF04055 Radical SAM superfamily MsedC_1637 PF06463 Molybdenum Cofactor Synthesis C MsedC_1638 PF00557 Metallopeptidase family M24 MsedC_1638 PF01321 Creatinase/Prolidase N-terminal domain MsedC_1639 PF01227 GTP cyclohydrolase I MsedC_1640 PF00120 Glutamine synthetase, catalytic domain MsedC_1640 PF03951 Glutamine synthetase, beta-Grasp domain MsedC_1641 PF08402 TOBE domain MsedC_1641 PF00005 ABC transporter MsedC_1642 PF00085 Thioredoxin MsedC_1643 PF00501 AMP-binding enzyme MsedC_1643 PF13193 AMP-binding enzyme C-terminal domain MsedC_1645 PF01029 NusB family MsedC_1645 PF01189 16S rRNA methyltransferase RsmB/F MsedC_1646 PF00132 Bacterial transferase hexapeptide (six repeats) MsedC_1647 PF02899 Phage integrase, N-terminal SAM-like domain MsedC_1647 PF00589 Phage integrase family MsedC_1659 PF00448 SRP54-type protein, GTPase domain MsedC_1659 PF02881 SRP54-type protein, helical bundle domain MsedC_1662 PF03946 Ribosomal protein L11, N-terminal domain MsedC_1662 PF00298 Ribosomal protein L11, RNA binding domain MsedC_1663 PF00687 Ribosomal protein L1p/L10e family MsedC_1666 PF02272 DHHA1 domain MsedC_1666 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MsedC_1666 PF01411 tRNA synthetases class II (A) MsedC_1674 PF02675 S-adenosylmethionine decarboxylase MsedC_1675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MsedC_1675 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MsedC_1679 PF00464 Serine hydroxymethyltransferase MsedC_1682 PF00162 Phosphoglycerate kinase MsedC_1690 PF01458 Uncharacterized protein family (UPF0051) MsedC_1691 PF00005 ABC transporter MsedC_1695 PF01597 Glycine cleavage H-protein MsedC_1696 PF08669 Glycine cleavage T-protein C-terminal barrel domain MsedC_1696 PF01571 Aminomethyltransferase folate-binding domain MsedC_1697 PF02347 Glycine cleavage system P-protein MsedC_1698 PF02347 Glycine cleavage system P-protein MsedC_1702 PF03952 Enolase, N-terminal domain MsedC_1702 PF00113 Enolase, C-terminal TIM barrel domain MsedC_1706 PF01434 Peptidase family M41 MsedC_1706 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_1706 PF17862 AAA+ lid domain MsedC_1708 PF00266 Aminotransferase class-V MsedC_1709 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MsedC_1709 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MsedC_1717 PF08264 Anticodon-binding domain of tRNA MsedC_1717 PF00133 tRNA synthetases class I (I, L, M and V) MsedC_1719 PF00218 Indole-3-glycerol phosphate synthase MsedC_1720 PF02885 Glycosyl transferase family, helical bundle domain MsedC_1720 PF00117 Glutamine amidotransferase class-I MsedC_1720 PF00591 Glycosyl transferase family, a/b domain MsedC_1721 PF00425 chorismate binding enzyme MsedC_1721 PF04715 Anthranilate synthase component I, N terminal region MsedC_1722 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MsedC_1723 PF02885 Glycosyl transferase family, helical bundle domain MsedC_1723 PF00591 Glycosyl transferase family, a/b domain MsedC_1724 PF00290 Tryptophan synthase alpha chain MsedC_1725 PF00291 Pyridoxal-phosphate dependent enzyme MsedC_1726 PF00708 Acylphosphatase MsedC_1727 PF01658 Myo-inositol-1-phosphate synthase MsedC_1728 PF02896 PEP-utilising enzyme, TIM barrel domain MsedC_1728 PF00391 PEP-utilising enzyme, mobile domain MsedC_1728 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain MsedC_1731 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase MsedC_1732 PF00291 Pyridoxal-phosphate dependent enzyme MsedC_1733 PF00696 Amino acid kinase family MsedC_1733 PF01842 ACT domain MsedC_1734 PF01118 Semialdehyde dehydrogenase, NAD binding domain MsedC_1734 PF02774 Semialdehyde dehydrogenase, dimerisation domain MsedC_1737 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MsedC_1737 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MsedC_1744 PF00118 TCP-1/cpn60 chaperonin family MsedC_1749 PF03485 Arginyl tRNA synthetase N terminal domain MsedC_1749 PF05746 DALR anticodon binding domain MsedC_1749 PF00750 tRNA synthetases class I (R) MsedC_1751 PF00317 Ribonucleotide reductase, all-alpha domain MsedC_1751 PF02867 Ribonucleotide reductase, barrel domain MsedC_1751 PF03477 ATP cone domain MsedC_1754 PF02934 GatB/GatE catalytic domain MsedC_1754 PF02637 GatB domain MsedC_1755 PF00710 Asparaginase, N-terminal MsedC_1755 PF17763 Glutaminase/Asparaginase C-terminal domain MsedC_1761 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase MsedC_1771 PF01467 Cytidylyltransferase-like MsedC_1771 PF00294 pfkB family carbohydrate kinase MsedC_1774 PF01425 Amidase MsedC_1775 PF02686 Glu-tRNAGln amidotransferase C subunit MsedC_1776 PF03091 CutA1 divalent ion tolerance protein MsedC_1778 PF00271 Helicase conserved C-terminal domain MsedC_1778 PF00270 DEAD/DEAH box helicase MsedC_1783 PF17915 Reverse gyrase zinc finger MsedC_1783 PF00270 DEAD/DEAH box helicase MsedC_1783 PF01751 Toprim domain MsedC_1783 PF01131 DNA topoisomerase MsedC_1785 PF00270 DEAD/DEAH box helicase MsedC_1785 PF08494 DEAD/H associated MsedC_1785 PF00271 Helicase conserved C-terminal domain MsedC_1787 PF01139 tRNA-splicing ligase RtcB MsedC_1791 PF01132 Elongation factor P (EF-P) OB domain MsedC_1791 PF09285 Elongation factor P, C-terminal MsedC_1791 PF08207 Elongation factor P (EF-P) KOW-like domain MsedC_1792 PF02978 Signal peptide binding domain MsedC_1792 PF00448 SRP54-type protein, GTPase domain MsedC_1792 PF02881 SRP54-type protein, helical bundle domain MsedC_1794 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase MsedC_1794 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MsedC_1798 PF00696 Amino acid kinase family MsedC_1800 PF00682 HMGL-like MsedC_1811 PF07690 Major Facilitator Superfamily MsedC_1813 PF00171 Aldehyde dehydrogenase family MsedC_1814 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MsedC_1815 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal MsedC_1815 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal MsedC_1816 PF01557 Fumarylacetoacetate (FAA) hydrolase family MsedC_1817 PF00106 short chain dehydrogenase MsedC_1825 PF02834 LigT like Phosphoesterase MsedC_1828 PF12706 Beta-lactamase superfamily domain MsedC_1828 PF00753 Metallo-beta-lactamase superfamily MsedC_1830 PF14572 Phosphoribosyl synthetase-associated domain MsedC_1830 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MsedC_1838 PF00069 Protein kinase domain MsedC_1838 PF03793 PASTA domain MsedC_1844 PF01138 3' exoribonuclease family, domain 1 MsedC_1844 PF03725 3' exoribonuclease family, domain 2 MsedC_1844 PF00013 KH domain MsedC_1844 PF00575 S1 RNA binding domain MsedC_1844 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MsedC_1850 PF16363 GDP-mannose 4,6 dehydratase MsedC_1851 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MsedC_1851 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MsedC_1851 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MsedC_1852 PF00483 Nucleotidyl transferase MsedC_1859 PF02709 N-terminal domain of galactosyltransferase MsedC_1859 PF00535 Glycosyl transferase family 2 MsedC_1866 PF01546 Peptidase family M20/M25/M40 MsedC_1866 PF07687 Peptidase dimerisation domain MsedC_1886 PF00534 Glycosyl transferases group 1 MsedC_1886 PF09318 Glycosyl transferase 1 domain A MsedC_1887 PF00483 Nucleotidyl transferase MsedC_1893 PF16363 GDP-mannose 4,6 dehydratase MsedC_1894 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase MsedC_1899 PF01380 SIS domain MsedC_1899 PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain MsedC_1900 PF00483 Nucleotidyl transferase MsedC_1915 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MsedC_1917 PF01264 Chorismate synthase MsedC_1918 PF08501 Shikimate dehydrogenase substrate binding domain MsedC_1918 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MsedC_1918 PF01488 Shikimate / quinate 5-dehydrogenase MsedC_1919 PF01761 3-dehydroquinate synthase MsedC_1920 PF00793 DAHP synthetase I family MsedC_1920 PF18152 DAHP synthase ferredoxin-like domain MsedC_1922 PF02780 Transketolase, C-terminal domain MsedC_1922 PF02779 Transketolase, pyrimidine binding domain MsedC_1923 PF00456 Transketolase, thiamine diphosphate binding domain MsedC_1928 PF13187 4Fe-4S dicluster domain MsedC_1928 PF01645 Conserved region in glutamate synthase MsedC_1929 PF00310 Glutamine amidotransferases class-II MsedC_1937 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MsedC_1937 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MsedC_1938 PF00483 Nucleotidyl transferase MsedC_1942 PF02511 Thymidylate synthase complementing protein MsedC_1944 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit MsedC_1944 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MsedC_1945 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit MsedC_1947 PF12838 4Fe-4S dicluster domain MsedC_1949 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MsedC_1950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MsedC_1950 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus MsedC_1950 PF00361 Proton-conducting membrane transporter MsedC_1951 PF00361 Proton-conducting membrane transporter MsedC_1952 PF01658 Myo-inositol-1-phosphate synthase MsedC_1956 PF03104 DNA polymerase family B, exonuclease domain MsedC_1956 PF00136 DNA polymerase family B MsedC_1958 PF01938 TRAM domain MsedC_1958 PF05958 tRNA (Uracil-5-)-methyltransferase MsedC_1960 PF00483 Nucleotidyl transferase MsedC_1960 PF01066 CDP-alcohol phosphatidyltransferase MsedC_1962 PF09334 tRNA synthetases class I (M) MsedC_1962 PF08264 Anticodon-binding domain of tRNA MsedC_1966 PF16886 ATPsynthase alpha/beta subunit N-term extension MsedC_1966 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MsedC_1966 PF02874 ATP synthase alpha/beta family, beta-barrel domain MsedC_1967 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MsedC_1967 PF02874 ATP synthase alpha/beta family, beta-barrel domain MsedC_1968 PF01813 ATP synthase subunit D MsedC_1973 PF01680 SOR/SNZ family MsedC_1974 PF01174 SNO glutamine amidotransferase family MsedC_1977 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MsedC_1977 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MsedC_1979 PF00205 Thiamine pyrophosphate enzyme, central domain MsedC_1979 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MsedC_1979 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MsedC_1981 PF01926 50S ribosome-binding GTPase MsedC_1983 PF01040 UbiA prenyltransferase family MsedC_1986 PF02675 S-adenosylmethionine decarboxylase MsedC_1988 PF01171 PP-loop family MsedC_1990 PF09334 tRNA synthetases class I (M) MsedC_1990 PF08264 Anticodon-binding domain of tRNA MsedC_1990 PF13603 Leucyl-tRNA synthetase, Domain 2 MsedC_1990 PF00133 tRNA synthetases class I (I, L, M and V) MsedC_1992 PF00155 Aminotransferase class I and II MsedC_1993 PF01634 ATP phosphoribosyltransferase MsedC_1993 PF08029 HisG, C-terminal domain MsedC_1994 PF00977 Histidine biosynthesis protein MsedC_1995 PF00475 Imidazoleglycerol-phosphate dehydratase MsedC_1996 PF00977 Histidine biosynthesis protein MsedC_1997 PF00815 Histidinol dehydrogenase MsedC_1998 PF01502 Phosphoribosyl-AMP cyclohydrolase MsedC_1998 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase MsedC_1999 PF00117 Glutamine amidotransferase class-I MsedC_2000 PF01502 Phosphoribosyl-AMP cyclohydrolase MsedC_2001 PF01883 Iron-sulfur cluster assembly protein MsedC_2002 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MsedC_2002 PF02403 Seryl-tRNA synthetase N-terminal domain MsedC_2003 PF04055 Radical SAM superfamily MsedC_2003 PF00919 Uncharacterized protein family UPF0004 MsedC_2003 PF01938 TRAM domain MsedC_2006 PF01037 Lrp/AsnC ligand binding domain MsedC_2010 PF01180 Dihydroorotate dehydrogenase MsedC_2011 PF01979 Amidohydrolase family MsedC_2013 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain MsedC_2013 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain MsedC_2014 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MsedC_2014 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MsedC_2015 PF00156 Phosphoribosyl transferase domain MsedC_2018 PF01895 PhoU domain MsedC_2021 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_2021 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_2024 PF04055 Radical SAM superfamily MsedC_2025 PF01018 GTP1/OBG MsedC_2025 PF01926 50S ribosome-binding GTPase MsedC_2025 PF09269 Domain of unknown function (DUF1967) MsedC_2026 PF08264 Anticodon-binding domain of tRNA MsedC_2026 PF09334 tRNA synthetases class I (M) MsedC_2026 PF01588 Putative tRNA binding domain MsedC_2027 PF01259 SAICAR synthetase MsedC_2030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MsedC_2030 PF02769 AIR synthase related protein, C-terminal domain MsedC_2030 PF00586 AIR synthase related protein, N-terminal domain MsedC_2031 PF00156 Phosphoribosyl transferase domain MsedC_2032 PF13537 Glutamine amidotransferase domain MsedC_2032 PF00156 Phosphoribosyl transferase domain MsedC_2033 PF02844 Phosphoribosylglycinamide synthetase, N domain MsedC_2033 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MsedC_2033 PF02843 Phosphoribosylglycinamide synthetase, C domain MsedC_2034 PF00586 AIR synthase related protein, N-terminal domain MsedC_2034 PF02769 AIR synthase related protein, C-terminal domain MsedC_2037 PF00764 Arginosuccinate synthase MsedC_2038 PF14698 Argininosuccinate lyase C-terminal MsedC_2038 PF00206 Lyase MsedC_2039 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MsedC_2039 PF00117 Glutamine amidotransferase class-I MsedC_2040 PF02142 MGS-like domain MsedC_2040 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MsedC_2040 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MsedC_2041 PF08443 RimK-like ATP-grasp domain MsedC_2043 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MsedC_2043 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MsedC_2050 PF00378 Enoyl-CoA hydratase/isomerase MsedC_2051 PF01040 UbiA prenyltransferase family MsedC_2052 PF01842 ACT domain MsedC_2052 PF03447 Homoserine dehydrogenase, NAD binding domain MsedC_2052 PF00742 Homoserine dehydrogenase MsedC_2054 PF01402 Ribbon-helix-helix protein, copG family MsedC_2054 PF08753 NikR C terminal nickel binding domain MsedC_2057 PF00582 Universal stress protein family MsedC_2058 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_2058 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_2060 PF03481 Putative GTP-binding controlling metal-binding MsedC_2060 PF01300 Telomere recombination MsedC_2061 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit MsedC_2062 PF05161 MOFRL family MsedC_2062 PF13660 Domain of unknown function (DUF4147) MsedC_2065 PF01325 Iron dependent repressor, N-terminal DNA binding domain MsedC_2065 PF02742 Iron dependent repressor, metal binding and dimerisation domain MsedC_2065 PF18357 Diphteria toxin repressor SH3 domain MsedC_2072 PF03453 MoeA N-terminal region (domain I and II) MsedC_2072 PF03454 MoeA C-terminal region (domain IV) MsedC_2072 PF00994 Probable molybdopterin binding domain MsedC_2073 PF12804 MobA-like NTP transferase domain MsedC_2080 PF00115 Cytochrome C and Quinol oxidase polypeptide I MsedC_2086 PF02223 Thymidylate kinase MsedC_2098 PF01967 MoaC family MsedC_2099 PF05496 Holliday junction DNA helicase RuvB P-loop domain MsedC_2099 PF12002 MgsA AAA+ ATPase C terminal MsedC_2099 PF16193 AAA C-terminal domain MsedC_2100 PF17864 RuvB AAA lid domain MsedC_2100 PF05491 RuvB C-terminal winged helix domain MsedC_2100 PF05496 Holliday junction DNA helicase RuvB P-loop domain MsedC_2101 PF01161 Phosphatidylethanolamine-binding protein MsedC_2102 PF00227 Proteasome subunit MsedC_2105 PF02310 B12 binding domain MsedC_2113 PF00701 Dihydrodipicolinate synthetase family MsedC_2114 PF00999 Sodium/hydrogen exchanger family MsedC_2116 PF09335 SNARE associated Golgi protein MsedC_2117 PF01925 Sulfite exporter TauE/SafE MsedC_2120 PF07690 Major Facilitator Superfamily MsedC_2121 PF03167 Uracil DNA glycosylase superfamily MsedC_2125 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MsedC_2125 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MsedC_2127 PF00293 NUDIX domain MsedC_2128 PF09190 DALR domain MsedC_2128 PF01406 tRNA synthetases class I (C) catalytic domain MsedC_2131 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MsedC_2131 PF07992 Pyridine nucleotide-disulphide oxidoreductase MsedC_2137 PF03600 Citrate transporter MsedC_2138 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MsedC_2138 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MsedC_2138 PF02770 Acyl-CoA dehydrogenase, middle domain MsedC_2139 PF17863 AAA lid domain MsedC_2139 PF01078 Magnesium chelatase, subunit ChlI MsedC_2140 PF02514 CobN/Magnesium Chelatase MsedC_2143 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_2146 PF00682 HMGL-like MsedC_2146 PF08502 LeuA allosteric (dimerisation) domain MsedC_2147 PF01040 UbiA prenyltransferase family MsedC_2150 PF02570 Precorrin-8X methylmutase MsedC_2151 PF01029 NusB family MsedC_2151 PF01189 16S rRNA methyltransferase RsmB/F MsedC_2152 PF01888 CbiD MsedC_2155 PF00437 Type II/IV secretion system protein MsedC_2158 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MsedC_2160 PF00730 HhH-GPD superfamily base excision DNA repair protein MsedC_2160 PF10576 Iron-sulfur binding domain of endonuclease III MsedC_2160 PF00633 Helix-hairpin-helix motif MsedC_2163 PF08494 DEAD/H associated MsedC_2163 PF00270 DEAD/DEAH box helicase MsedC_2163 PF00271 Helicase conserved C-terminal domain MsedC_2169 PF00392 Bacterial regulatory proteins, gntR family MsedC_2169 PF00155 Aminotransferase class I and II MsedC_2170 PF00994 Probable molybdopterin binding domain MsedC_2170 PF18146 Damage-inducible protein CinA KH domain MsedC_2170 PF02464 Competence-damaged protein MsedC_2171 PF00561 alpha/beta hydrolase fold MsedC_2172 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MsedC_2172 PF03484 tRNA synthetase B5 domain MsedC_2173 PF01409 tRNA synthetases class II core domain (F) MsedC_2175 PF00557 Metallopeptidase family M24 MsedC_2179 PF01966 HD domain MsedC_2181 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain MsedC_2181 PF00749 tRNA synthetases class I (E and Q), catalytic domain MsedC_2182 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MsedC_2186 PF00953 Glycosyl transferase family 4 MsedC_2189 PF00696 Amino acid kinase family MsedC_2191 PF01875 Memo-like protein MsedC_2192 PF00318 Ribosomal protein S2 MsedC_2193 PF00380 Ribosomal protein S9/S16 MsedC_2194 PF00572 Ribosomal protein L13 MsedC_2195 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MsedC_2197 PF00411 Ribosomal protein S11 MsedC_2198 PF01479 S4 domain MsedC_2198 PF00163 Ribosomal protein S4/S9 N-terminal domain MsedC_2199 PF00416 Ribosomal protein S13/S18 MsedC_2201 PF01894 Uncharacterised protein family UPF0047 MsedC_2203 PF00579 tRNA synthetases class I (W and Y) MsedC_2205 PF00136 DNA polymerase family B MsedC_2205 PF03104 DNA polymerase family B, exonuclease domain MsedC_2212 PF01336 OB-fold nucleic acid binding domain MsedC_2212 PF00152 tRNA synthetases class II (D, K and N) MsedC_2220 PF03176 MMPL family MsedC_2225 PF10609 NUBPL iron-transfer P-loop NTPase MsedC_2233 PF02272 DHHA1 domain MsedC_2233 PF01411 tRNA synthetases class II (A) MsedC_2233 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MsedC_2234 PF00155 Aminotransferase class I and II MsedC_2255 PF00872 Transposase, Mutator family MsedC_2258 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MsedC_2259 PF00528 Binding-protein-dependent transport system inner membrane component MsedC_2261 PF00005 ABC transporter MsedC_2261 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_2262 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MsedC_2262 PF00005 ABC transporter MsedC_2263 PF03144 Elongation factor Tu domain 2 MsedC_2263 PF09107 Elongation factor SelB, winged helix MsedC_2263 PF09106 Elongation factor SelB, winged helix MsedC_2263 PF00009 Elongation factor Tu GTP binding domain MsedC_2266 PF01253 Translation initiation factor SUI1 MsedC_2267 PF00491 Arginase family MsedC_2268 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MsedC_2268 PF03129 Anticodon binding domain MsedC_2274 PF02441 Flavoprotein MsedC_2278 PF00814 Glycoprotease family MsedC_2280 PF01725 Ham1 family MsedC_2281 PF00248 Aldo/keto reductase family MsedC_2285 PF08704 tRNA methyltransferase complex GCD14 subunit MsedC_2289 PF00795 Carbon-nitrogen hydrolase MsedC_2290 PF17915 Reverse gyrase zinc finger MsedC_2290 PF00270 DEAD/DEAH box helicase MsedC_2290 PF01131 DNA topoisomerase MsedC_2290 PF01751 Toprim domain MsedC_2291 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_2291 PF01434 Peptidase family M41 MsedC_2291 PF06480 FtsH Extracellular MsedC_2291 PF17862 AAA+ lid domain MsedC_2292 PF10143 2,3-bisphosphoglycerate-independent phosphoglycerate mutase MsedC_2292 PF01676 Metalloenzyme superfamily MsedC_2294 PF08461 Ribonuclease R winged-helix domain MsedC_2294 PF00773 RNB domain MsedC_2294 PF00575 S1 RNA binding domain MsedC_2294 PF17876 Cold shock domain MsedC_2294 PF08206 Ribonuclease B OB domain MsedC_2296 PF09107 Elongation factor SelB, winged helix MsedC_2296 PF09106 Elongation factor SelB, winged helix MsedC_2296 PF09105 Elongation factor SelB, winged helix MsedC_2296 PF03144 Elongation factor Tu domain 2 MsedC_2296 PF00009 Elongation factor Tu GTP binding domain MsedC_2301 PF08267 Cobalamin-independent synthase, N-terminal domain MsedC_2301 PF01717 Cobalamin-independent synthase, Catalytic domain MsedC_2306 PF17284 Spermidine synthase tetramerisation domain MsedC_2309 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MsedC_2309 PF10996 Beta-Casp domain MsedC_2309 PF00753 Metallo-beta-lactamase superfamily MsedC_2310 PF00465 Iron-containing alcohol dehydrogenase MsedC_2311 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MsedC_2313 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain MsedC_2313 PF05221 S-adenosyl-L-homocysteine hydrolase MsedC_2314 PF00005 ABC transporter MsedC_2315 PF01950 Fructose-1,6-bisphosphatase MsedC_2320 PF00118 TCP-1/cpn60 chaperonin family MsedC_2323 PF03129 Anticodon binding domain MsedC_2323 PF13393 Histidyl-tRNA synthetase MsedC_2325 PF01008 Initiation factor 2 subunit family MsedC_2328 PF01702 Queuine tRNA-ribosyltransferase MsedC_2331 PF06480 FtsH Extracellular MsedC_2331 PF01434 Peptidase family M41 MsedC_2331 PF00004 ATPase family associated with various cellular activities (AAA) MsedC_2331 PF17862 AAA+ lid domain MsedC_2333 PF13167 GTP-binding GTPase N-terminal MsedC_2333 PF01926 50S ribosome-binding GTPase MsedC_2333 PF16360 GTP-binding GTPase Middle Region MsedC_2336 PF00145 C-5 cytosine-specific DNA methylase MsedC_2344 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MsedC_2347 PF01884 PcrB family