LOCUS MH572351 4227 bp DNA circular PHG 14-AUG-2018 DEFINITION Microviridae sp. isolate SD_SC_117, complete genome. ACCESSION MH572351 VERSION MH572351.1 KEYWORDS . SOURCE Microviridae sp. ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4227) AUTHORS Creasy,A., Rosario,K., Leigh,B., Breitbart,M. and Dishaw,L.J. TITLE Unprecedented diversity of ssDNA phages from the family Microviridae detected within the gut of a protochordate model organism (Ciona robusta) JOURNAL Unpublished REFERENCE 2 (bases 1 to 4227) AUTHORS Creasy,A., Rosario,K., Leigh,B., Breitbart,M. and Dishaw,L.J. TITLE Direct Submission JOURNAL Submitted (03-JUL-2018) College of Marine Science, University of South Florida, 140 7th Ave S, St Petersburg, FL 33701, USA COMMENT ##Assembly-Data-START## Assembly Method :: SPAdes v. 3.6.0 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4227 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="SD_SC_117" /isolation_source="Ciona robusta intestinal tract" /host="Ciona robusta" /db_xref="taxon:2202644" /country="USA" /collection_date="2015" CDS join(3957..4227,1..65) /note="similar to PHA00198" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXL14824.1" /translation="MKVKIFAIHDSKINAHMAPFTMLNEHQAIRAFSDMVNSRDHVIG QNPGDYTLFELGEFDDNSGEIHPRASRHSHANGVDLRNLSKRQWIHNGQIGDVNSLEP NSEGGITSE" CDS 1..1581 /note="similar to PHA00363" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXL14828.1" /translation="MVKSVMSTAWNQIPKAELPRSSFNRSHGHKTTFDAGKLVPIYVD EALPGDTFNLKLTAFSRLATPIKPIMDNMFMETFFFSVPVRQIWANWTKFNGEQIQPG DSTDFQVPLINLDTAGSAEGSLADHFGLPINKTYSVNSLHFRAVQHIWNEWFRDQNLL PYSPVPIDDGPDPQGPFTNLPPRRKRPDYFTSCLPWAQKGDPVLIPVASTAPVVPSST DPIPTFKEAGLGSEPPKQLMMNDTSTAANWQSQPTLNLGAQWVYSGLEADLASATGVS INSLRRAFQVQKVLERDARSGTRYPETLRAHFGVTDPQMLVHQRPEFLGGGQSMVNIN PVQQTAATDPAATPQGNLAAEGTVTLNNHGFTKSFTEHCLLVGFVNVRADLNYQEGID RMWVRRTRFDYYWPALSHIGEQSVQNLEIHFVGTPATDNAVFGYQERYAEYRYKPSKI TGKFRSAASDTLDVWHLAEKFENTPVLNQDFILDNPPVDRVVAVPSEPHFLFDGYFNL QCARVMPTYGTPGMIDHF" CDS 1631..2329 /note="similar to PHA00327" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXL14827.1" /translation="MALKTYAPAPSKTMGIFSAIAPAAISAIGSLLGGKAADKGAARA NRQNIALAREQMAFQERMSSTAYQRAAKDLSAAGLNRILALGSPSSTPSGALATVQSE TAGKAEALKTGTASALQAKIAYSQYKQLQAEIRNKNASTAHIDEQTKKAAQETGITTA QRLMIERANDAMGVTDPAVDLINKHIPQLGEYGVKLSKAYQKWQPPKLGVSYEDYRRW QNSRGVKTRKKSEK" CDS 2236..2769 /note="similar to PHA00099" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXL14826.1" /translation="MATAKTRCVIRRLSPLAELPRRQNKEKVRKMTQPKIYTQYTRPE HEGVTYDPEDTTVQQNQAEACDINNIVNTFHRTGLLSHVVSEPPKYQDNDGKSFTEAM LQVKAVEGMFSELPSDVRQHFDNDPVKFLDAYEDDDQTDYLIENGLIEKPELGEPGEP ETTPPAPEAPALEPESA" CDS 3071..3985 /note="similar to PHA00330" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXL14825.1" /translation="MPCYHPLQAFRTPGGKIVFKPTGLPDYQDHLEIPCGRCVGCKLE RSREWAVRCIHEAQMHEENDYLTLTYRDSALPPGGTLIKKHMQDFIKRLRHHFPRKTI RYLMCGEYGEETQRPHYHMILFGIRFNDRKPFKMVRGNMIFTSDRLDEIWGHGYCQVG NVTFKSAAYVARYVLKKQTKNDKDTDRVDPETGEIFEPRLPEYIACSLKPAIGKSWIE KYENDVFPQDFVVIGNRQFPVPKYYRRLYADKNPEKAEEMRAKRIEKAKASPDNSSSR LATREDIQKRRLDKLKRNQNESENLRDT" ORIGIN 1 atggtcaaat cggtgatgtc aacagcttgg aaccaaattc cgaaggcgga attacctcgg 61 agtagcttca accgatctca cggacacaag accacattcg atgccgggaa gctcgtccca 121 atatacgtag acgaagctct ccccggcgac accttcaacc tcaaattaac ggcgttctcc 181 cggcttgcaa ctcccataaa gccgatcatg gacaacatgt tcatggaaac ctttttcttc 241 tcagtaccag tgcgccaaat atgggccaac tggactaaat tcaatggcga acaaatacaa 301 ccaggtgatt caacggactt tcaagtaccg cttatcaacc ttgatacagc aggcagtgca 361 gaaggctcgc ttgccgatca ctttggcctg cctatcaaca aaacttattc tgttaacagc 421 ctgcacttcc gcgcagtaca gcatatctgg aatgaatggt tcagagatca aaatctcctt 481 ccttacagtc cggtaccaat cgacgacggt ccagacccac aaggaccgtt cacaaacctg 541 ccgccacgta gaaagcgtcc cgattatttc acgtcgtgct taccatgggc gcaaaaaggg 601 gacccggtat taatccccgt cgcgtcaacc gcgccagttg tacccagttc aaccgacccg 661 atccctacat tcaaggaagc cggtctcgga agtgaacctc caaaacagct aatgatgaac 721 gacacatcga ccgccgcaaa ctggcagtca caaccgacac ttaacctcgg tgcccagtgg 781 gtatactccg gccttgaggc cgatctcgcc agcgcaaccg gagtcagcat caacagcctc 841 agacgggcat tccaagtcca aaaagtcctc gagagagacg cccgttccgg gacacgctac 901 ccggaaacgc tccgggctca tttcggggta acagaccctc aaatgctcgt tcatcaacgc 961 cccgaattcc tcggtggcgg acaatccatg gtcaacatca acccagtaca acaaaccgcc 1021 gctaccgatc ctgcagcgac tcctcaaggc aaccttgccg ccgagggtac agtcacactc 1081 aacaatcacg gattcacaaa atcatttacg gaacattgcc ttctcgtcgg tttcgttaac 1141 gtaagagccg acctgaatta tcaggaaggg atcgaccgaa tgtgggtgcg gcgaaccaga 1201 ttcgattact actggcccgc actgtcccac atcggagagc aatccgtaca aaatctggag 1261 atacacttcg tgggtactcc agcaaccgat aacgcagtat tcgggtatca agaacgatac 1321 gctgagtatc gttacaagcc ttcaaaaatc accggcaaat tccggtccgc tgcatcggat 1381 acgcttgacg tatggcacct cgcagagaaa ttcgagaaca ccccagtcct gaatcaggac 1441 ttcatactgg ataatccacc agtcgataga gttgtagccg taccatcaga accgcatttc 1501 ttgttcgatg gatacttcaa cctccaatgt gcacgcgtca tgccgaccta cggaacacca 1561 ggtatgatcg atcacttcta atcaaccgga gtgaatggcc gatttttaat cggcctgaaa 1621 gaacggttct atggcactca aaacttacgc accagctccg agtaaaacga tgggcatatt 1681 ttccgcaata gcaccagcag caatatcagc aattggctca ctattaggcg gtaaagccgc 1741 agacaaaggc gcggctcgcg ccaacagaca aaacatagca ctcgcccggg agcaaatggc 1801 attccaagaa cgaatgtcca gcacagccta tcaacgcgca gcaaaagacc tcagcgcagc 1861 aggactaaat agaatcttgg cacttggctc cccatcatca acaccatcag gcgcactcgc 1921 caccgtacag tctgagacgg ccggtaaggc cgaagcactc aaaacaggta ctgcatcagc 1981 actacaagcg aaaatcgctt acagccaata taaacagcta caggcggaaa tcaggaataa 2041 aaacgccagc acagcgcaca tcgatgaaca aaccaaaaaa gccgcacagg aaaccggcat 2101 aactactgca cagcgactca tgattgagcg cgcaaatgac gctatgggcg tcaccgatcc 2161 ggcagtagac ttaatcaaca aacacattcc tcaactgggt gaatacggcg tcaaactctc 2221 aaaagcatat cagaaatggc aaccgccaaa actcggtgtg tcatacgaag attatcgccg 2281 ctggcagaac tcccgcggcg tcaaaacaag gaaaaagtca gaaaaatgac acaaccgaaa 2341 atctataccc agtacacaag gccagaacac gaaggcgtca cctatgatcc tgaggacacc 2401 acagtacaac agaatcaggc ggaagcatgt gacatcaata acatcgtcaa cacgttccac 2461 cgcactggcc tgctctcaca cgtggtatca gagccaccga aataccaaga caatgacggt 2521 aaatcgttca ctgaagcgat gcttcaggtt aaggctgtag agggtatgtt ctcagaactg 2581 ccttcagacg tccgacagca ctttgataac gatcccgtca aattcctcga tgcctacgag 2641 gacgacgatc aaacagatta tttgatcgaa aacgggctaa ttgaaaagcc cgaactgggc 2701 gaaccaggtg agcccgaaac cacgcccccg gcgccagagg cgcccgctct tgaaccggag 2761 agcgcttgac tcggggcgtg gggaccatta tattcttgtt ctataatggt ccaggtgaca 2821 gcgggtacat actttgagtc actcaatacg ctcttttctc ttaaattagg ccctcaaaat 2881 ggcatacaga aaaaaaattt cgcgtaaaaa gtcaaaaaaa atgttctcga aaggtgcagt 2941 caaaatgcac aagaaaaacc ggaaatctat cggaatgcag aggggcggga cagccctcta 3001 aaagttttgc cctacctgtt ggatcaagga cgattcttcg ggggctcaca cccgacaggt 3061 agggcaattt atgccttgtt atcatcctct acaagccttc agaacccccg gcggtaaaat 3121 tgtattcaaa ccgaccggat taccagacta tcaagatcac ttagaaatcc cttgcggacg 3181 atgcgtcggc tgtaagctcg aacgctcgcg agaatgggcc gtaagatgca tccacgaagc 3241 acagatgcac gaagaaaatg attatttaac gctaacctat cgtgactcag cactaccacc 3301 cggtggcacc ttaataaaaa aacacatgca ggattttatc aaaagactgc gtcatcactt 3361 cccaagaaaa accattcgct atctcatgtg tggcgaatat ggcgaagaaa cacaacgacc 3421 tcactaccac atgattctat tcgggatccg cttcaacgat cgcaaaccct tcaagatggt 3481 acgcggcaat atgatattca catcagacag actggacgaa atctggggtc acggatattg 3541 ccaggtaggc aatgtgacat tcaagagtgc ggcatacgtc gcacgttacg tcctaaaaaa 3601 acagacaaaa aatgacaaag acacggatcg agtagacccg gaaacaggtg agatattcga 3661 accaagactg ccagaataca tagcatgctc actcaaaccc gcaataggaa aatcatggat 3721 agaaaaatac gaaaacgatg ttttcccgca ggatttcgta gtcataggca accgccaatt 3781 tccagtccca aagtattaca ggcgtcttta cgccgacaaa aatccagaga aagcagaaga 3841 aatgcgcgca aagcgcattg aaaaagcgaa ggccagccca gataactcta gctcacgcct 3901 cgcaacacgc gaggatatcc agaaaagaag gctcgataag ctaaagagaa atcagaatga 3961 aagtgaaaat cttcgcgata catgactcaa aaataaacgc ccacatggcg cccttcacaa 4021 tgctaaacga acatcaggca atcagagcat tctctgatat ggtcaattca cgtgatcacg 4081 tgattggaca aaatccaggt gattataccc tgttcgaact tggcgaattc gacgacaaca 4141 gtggcgaaat tcaccctaga gcatctcgac attcacacgc aaacggcgta gatttacgaa 4201 atctctcaaa acgtcagtgg atacaca //