LOCUS MH552512 5858 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctbc18, complete genome. ACCESSION MH552512 VERSION MH552512.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074562 Sequence Read Archive: SRR7122355 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 5858) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5858) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (28-JUN-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH552512.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 64.413110x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5858 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbc18" /isolation_source="macaque stool" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="closest relative: Viruses; ssDNA viruses; Microviridae; unclassified Microviridae gi|971765481|ref|YP_009218533.1|-major-capsid-protein-VP1- [Parabacteroides-phage-YZ-2015a]; genome binned from sequencing reads available in SRX4043891; metagenomic" CDS 1..2310 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXF52273.1" /translation="MANRNRNPFKVTPPPNRPKRNTFDLSYSNNLTAKIGKLIPVMCK EVVPGDTFHITPDFGLRFMPTIFPIQTRLRADLHFFYVRNRNLWDGWQKFIGDTGKSS SDFPVIADKPITSGFYDNGSLADYLGIPTQAVSDIQEQQTVTPNEFPIGRPWLDIAYQ SPNVHSSSLRPKMLRYLPFQRYANSNIGATSHVRFPISVSFNSDGTIMAPHVMFLLPV SDNSSLLDGSELYLTTANRYFTLSSSLLQSSQSCRVAYFSSKLMFQTDIDLKLLAVTD PLDITFKESRKLGVKFSAFSKLYRKEGGAEVKFDEIANDVQYIALCFDGDFSGLFEDG FTLSDITPMTADKPTSVVAPVTFDSLRLCYTLNFTQNVVDDDVYNTYKRANFPISALP FRAYRSIYNGHYRNNFVDPIIDVKGNPDYDTFVENKGDGVDKFPYELENRYWEDDYLT TCKPSPQQGAAPLVGVRTNDPTLNTQVLSTNSGDVTVKTNVQGKVVAVSHYDKNLPVG SIEALNEAISFGISISDFRNVDALQRWLEINQRRGFRYKEQIQSHYGVNVSYEELDMP EYIGGVSKDIQTSAILNTAKSSGNELGEFGGVASTFAQGKTINKYCDEHGFIMAILSI VPIPTYSQVMPKIFMKNSKLDFFFPEFGHIGYQPISQGELTPLQCTKKGLPYDKTFGY QRAFYEYLASLDESHGDFRGDLRNFLIHREFADVPILSKQFISIDYREVNNIFAVKSD TDKILGQMYFKISAERPIPFFGVPSLTQN" CDS 2318..2605 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52270.1" /translation="MYYRNKMKSTLPVVPNQVLTMAQMDALRKEGKPISSFQMSADNF FDGSDNPTPEVPLEMQRSVDINQVWEEELETRGKFDKMERRKKIQQQNSID" CDS 2605..3678 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52271.1" /translation="MFGEVVGAIAGVYNNERNVEAQRENNLLQIEEAEKNRQFQWDML RANQQYNSASAQRKRLEDAGLNADMMYSGQGASAAAGQSMGAGNPVQPQTAAALRDPL AAQHSALLAAQIFKMRSEKEGLDLDNQGKKVDVGIKQVFAWEKAAADLGLTKEQTNYF VSAGQNLDVQCDKLRKEMELFDQKIATMKEQLNQIVADTNLKNKQALTQEELAKLYSA QCAGIELDNEMKKIIKEKLPAKIQSEIAANWAAVNKANSEVALNKNLAEESTARKDLF GEQKNTEKERQGLFKSEAGKFDSETALNRIDERTRHVKNVFGIVESGTRSLENLTKSY ENVASGYEKTTRGTRHLVPLPGF" CDS 4359..5720 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXF52272.1" /translation="MCLHIQYIQRLDAHDVFLRGFNSLYQGSNLVCFIGEKSFSSNGY IRLPWIKTWYVNHDDENDIVYTREQRDPQKKYYKEFSEDMTLFSLVNEETGESLPLYN AVPCGNCVVCQDTKRSKTSNRCILQSCVSGKPFFLTLTINDENLYHFRERTQKVQEMQ KFLKRLRKRLICTYGIDFKETPLKYVIVSEYGSKSGRFHFHALIWLDNNEMHSYRSFF DTDTQKAYTAPLFSEAVKSCWKFGYCKVENASDMTGKYCFKYMSKQRGNIKLQSKLLG WQKVEEFKEVIFENPQMLSFPVVDLDGQKHEIPITDYMTRKIYPTFARSIDKELRDEI VSLYNEIYPKQLFNKDFKYLQEYLDRHFQDLNFPLKSLGDAREREFAATPLSCLSSSY IERYLNLKDKMSKLDFKYCSLCDKKNKEHVRFVMSNMSLDDTVRAVRIIRKQQLLIEK EII" ORIGIN 1 atggcaaata gaaacagaaa tcctttcaaa gttactccgc cacctaacag accaaagcgg 61 aatacttttg acctttcgta ttcaaacaat ttgactgcga aaattggaaa acttattcct 121 gtgatgtgca aagaagttgt gccgggagat acttttcata ttacgcccga ttttggattg 181 cgttttatgc caactatatt ccctatccaa acaagattgc gtgccgattt gcatttcttc 241 tatgtgagaa atcgtaacct ttgggacggt tggcagaaat ttattggaga cacgggcaaa 301 agttcttctg acttcccagt aattgcggac aagcccataa catcaggatt ttatgacaac 361 ggaagtcttg ctgattattt aggaatacca acacaagcgg tttcggatat tcaggaacaa 421 cagacagtta ccccgaatga attccccata ggtcgtccat ggcttgatat tgcttaccaa 481 tctccgaatg tacattcgtc gtctttgcgt cctaaaatgt tgcgatattt gccatttcag 541 aggtacgcaa attcaaatat tggagcgact tcccatgttc gttttccaat tagtgtttcg 601 tttaattctg atggaacaat tatggccccg cacgttatgt ttttgttacc tgttagcgat 661 aattcctcat tgttggatgg ttctgaatta tatttgacaa cagcaaatag atattttact 721 ttgtcatcct ctttgttgca atcttcccaa tcatgccgag ttgcttattt ttcgtcaaaa 781 ttaatgtttc aaaccgatat tgatttgaag ttgcttgcag ttactgaccc cctcgatatt 841 acatttaaag agtctcgaaa gttaggtgta aagtttagtg ctttctctaa gttgtatcgt 901 aaggaaggag gtgcagaagt aaaatttgat gagatagcaa acgatgtaca atatattgca 961 ttgtgttttg atggtgattt ttcgggactg tttgaagatg gttttactct ttccgacatt 1021 acgccaatga cagcggacaa acccacatcg gttgttgccc ctgttacttt tgattctttg 1081 cgattgtgtt ataccttaaa ttttacgcaa aatgttgttg atgatgacgt ttataatact 1141 tataagcgtg ctaattttcc catttctgct ttgccattcc gtgcttaccg ctctatttat 1201 aacggtcatt accgtaacaa tttcgttgac ccgataattg atgtaaaagg aaatccagat 1261 tacgacacat tcgttgagaa taaaggcgat ggagtggata aattccctta tgaacttgaa 1321 aatcgttatt gggaagatga ttatttgacg acttgtaaac catcaccgca acaaggtgca 1381 gcccctttgg ttggagttcg tacaaatgac ccaacattga atacacaagt cctttccact 1441 aattctggag acgtaaccgt aaagactaac gtacaaggaa aagtagttgc ggtttctcac 1501 tatgacaaaa atttacccgt cggttctatt gaggcactta atgaggctat aagttttggt 1561 atatctatat cggatttccg aaatgttgat gctttgcaaa gatggttaga aataaatcaa 1621 cgtcgtggct ttcgttataa ggagcaaatc caatcgcatt atggcgttaa tgtttcatac 1681 gaagagttgg acatgcctga atacattgga ggagtttcta aagatattca aacttctgca 1741 attcttaata ctgcgaaatc ttcgggaaat gaattaggag aatttggcgg tgtcgcctcg 1801 actttcgcac aaggtaaaac tataaataag tattgcgacg aacacggctt tatcatggct 1861 attttgtcaa tagtgccgat acctacttac tcccaagtca tgccaaaaat ctttatgaaa 1921 aacagtaagt tggatttctt ctttcctgaa tttgggcata ttggatacca accaatttca 1981 caaggagaat taaccccgtt gcagtgtact aaaaaaggac ttccttacga taagactttc 2041 ggttatcaac gtgcatttta cgaatatctt gcgtcattgg acgaaagcca cggagatttt 2101 cgaggagatt tgcgtaattt cttaattcat agagagtttg ccgatgttcc gatactttca 2161 aagcaattta tttctatcga ttacagagaa gtgaacaata tttttgcagt gaaatcggat 2221 accgataaaa ttctcggaca aatgtatttc aaaatatcag ccgaacgccc tataccgttc 2281 tttggtgttc catcgttaac acaaaactaa ttgccttatg tattacagaa acaaaatgaa 2341 atctaccttg cctgttgtcc caaatcaagt tttgacaatg gcacaaatgg acgccctccg 2401 aaaggagggt aagcccattt cctcttttca aatgtctgcg gataatttct tcgatggttc 2461 ggataatcca accccagaag taccccttga aatgcaacgt tcagttgata ttaaccaagt 2521 atgggaagaa gaacttgaaa cccgtggcaa attcgataag atggagagaa gaaagaagat 2581 acaacaacaa aatagtattg actaatgttt ggtgaagtcg taggtgctat tgcgggagtt 2641 tataataatg aacgtaatgt agaagcacaa agggaaaata atctattgca aatagaagag 2701 gcagaaaaaa ataggcaatt tcaatgggat atgttgcgtg ccaatcaaca atataattca 2761 gcgtctgcac aacgtaagcg tttggaagat gctggattga acgccgacat gatgtatagc 2821 ggacaaggtg cttctgctgc tgctggtcaa tcaatggggg ctggaaatcc tgttcagcct 2881 caaaccgctg cggctttgcg tgacccctta gccgctcaac attctgcatt gcttgctgcc 2941 caaattttca aaatgcgttc tgaaaaagag ggcttagacc ttgataacca aggaaaaaaa 3001 gttgatgttg gaattaaaca agtttttgca tgggaaaagg ctgctgcaga tttaggattg 3061 acaaaagaac aaacgaatta ctttgtttct gctggtcaaa atttggatgt tcagtgtgat 3121 aagttgcgaa aagaaatgga actctttgac caaaaaattg ctactatgaa agaacaattg 3181 aaccagattg ttgcggatac taatttgaag aataaacagg ctttgacaca agaagaactt 3241 gcgaaacttt attctgctca atgtgctgga attgaacttg ataatgagat gaagaagata 3301 atcaaggaaa aattgccagc taaaattcag tctgaaattg ctgcaaattg ggctgctgta 3361 aacaaggcta attccgaagt tgcacttaat aagaaccttg cagaagagag tacagcccga 3421 aaggatttat tcggagaaca aaagaacact gaaaaggagc gacaaggttt gtttaagagt 3481 gaggcaggta aatttgatag tgaaaccgca cttaatagga ttgatgagag aacaaggcac 3541 gttaagaatg ttttcggaat tgtcgaaagc ggtacacgtt ctcttgaaaa tcttacgaag 3601 tcgtacgaaa atgttgcaag tggttacgag aaaacaaccc gtggcactcg tcatttggtt 3661 cctcttcccg gtttttaatc tgctcttcgc taaatggaac gttgtatttg tttttatatt 3721 tgagcgttat ttttatattt atattctttt atatttatat catttataac gctcttttcc 3781 ttatttctcc ccgaggttcc cgtgtgtctc cactgctttg ctgagcctca ttcaaaaggc 3841 tcagcaaaaa tagcagtgga agagtacgta gtactcgtgt gatgaaattc cgaggaataa 3901 catttgaggt actttgataa agtacctctt tatttacttg acaatataag agcaattgac 3961 acacgtttga taatgtgcaa cttgcgaaaa gaaacttatt agtgcctacg gcaagtgtaa 4021 atgctatacg atagtgcatt taacaatatt taacaccctt accccttgac aattcccgaa 4081 aatgttgtat ctttgcaacg taaacaataa aacaataaga caatgacagg tcaacaatta 4141 gaacaatttg aagtagcatt gaaaagcact tgcttttatt ctgaacatca caaagcaatg 4201 gaaaaaggat atattcgcaa atcttgtgga tatatagaac gttatgcagg acgttttgga 4261 tacggtttca aaattcatta tccgaattct taccgttcat tgagtaatgg atttcatacc 4321 gtcgtttatt tcattgaaaa ccgcaaaatc aaataattat gtgcctgcac attcagtata 4381 tacaaagact tgatgcccac gatgtttttc ttcgtggctt caactctctt tatcaaggtt 4441 caaatttagt ttgctttatt ggcgaaaaat ctttttcctc taatggatac attcgtttgc 4501 cgtggataaa aacgtggtac gttaaccacg acgacgaaaa cgatatagtt tatacgcgtg 4561 aacaacgaga cccacaaaag aaatattaca aggaattttc cgaggatatg actttatttt 4621 cgttggttaa cgaagaaaca ggagagagtt tgccacttta caatgcagta ccctgcggaa 4681 attgtgttgt ctgtcaggat acaaaacgtt caaaaacttc aaaccgctgt atattgcaat 4741 cttgtgtgag tggtaaaccc ttctttttaa ctctgacaat taacgacgaa aatttgtatc 4801 attttcgtga gcgtacgcaa aaggttcagg agatgcaaaa attcctcaaa cgcttgcgta 4861 agcgtcttat ttgtacttat ggaattgatt tcaaggaaac accattgaag tacgtaattg 4921 tatcggaata tggttcaaaa tcaggacggt ttcattttca cgctcttatt tggctcgata 4981 ataatgaaat gcactcttac cgctcttttt ttgatactga cactcaaaaa gcatataccg 5041 cacctttgtt ttccgaggct gtaaaatcat gctggaaatt tggatattgc aaagtcgaaa 5101 acgcttctga tatgacggga aaatattgct tcaaatatat gtcgaaacag cgtggaaata 5161 tcaaattgca atcgaaactt cttggctggc agaaagttga ggagttcaaa gaagttatat 5221 ttgaaaatcc ccaaatgctt tcctttcccg tcgttgacct cgacggacaa aaacacgaaa 5281 tccccataac ggattacatg acacgcaaaa tatatccaac ctttgcccgt tcaattgaca 5341 aagaattgcg tgatgaaatc gtttctttgt acaacgaaat atatccgaaa caattgttta 5401 acaaggactt caaatatttg caagaatatc ttgatagaca ttttcaggac ttaaattttc 5461 cccttaaatc ccttggagat gcacgagaaa gagaatttgc agcaactccc ctatcttgtt 5521 tatcttcctc atatattgaa cgatatttga acttgaaaga taaaatgtct aaacttgact 5581 tcaaatattg ctctttgtgc gataaaaaga acaaagaaca tgttcgtttt gttatgtcga 5641 atatgtcctt agacgataca gtaagagcgg tacgaattat acggaaacaa cagttactta 5701 ttgagaaaga aataatttaa tacaatacat tatgaagtta caaaaaatta tcaagctaat 5761 tattgcgtta cttaccgtaa ttggttcgtt tattggaggt caagcctctg caaaaaatgg 5821 tgtaatcgac ttatttaata agtctaatat tgaaaact //