LOCUS MH552492 6019 bp DNA circular ENV 28-JUL-2018 DEFINITION Microviridae sp. isolate ctbc205, complete genome. ACCESSION MH552492 VERSION MH552492.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074553 Sequence Read Archive: SRR7122376 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 6019) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 6019) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (28-JUN-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 15.301711x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..6019 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbc205" /isolation_source="mouse tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="closest relative: Viruses; ssDNA viruses; Microviridae; unclassified Microviridae gi|971765803|ref|YP_009218802.1|-major-capsid-protein-VP1- [Parabacteroides-phage-YZ-2015b]; genome binned from sequencing reads available in SRX4043870; metagenomic; derived from metagenome: animal metagenome" CDS 1..2235 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXF52041.1" /translation="MANPFKPSNSAVHKPNRNSFDLSHSNHLTFGFGQLIPCLCQECL PGDTFKIDSALGLRFMPLAFPVQTKVRAHVHFFYQRAKNLWPDFLDFIYGNDKLQGRT LVHPYIDFGPSGTKNLGLLETCGLGDYLGLPTVRYSSSISKTGGSFDYRAPVAANSVF AFDYNSSPGSAVQPVPSISNAANFTATAFSPLAPSTGSSPVQDVTYPNRSKYGLAMFY GNLTLSQLVYPGQARFTVDFPAGWQFDDSSVGFAVYARSSTGNKPLKIGSASVESVSR VGTSGTEFFTRVVFSFEFLSISDELIGIANGTSTAQPFYVGVWSRFQTVGTTPQLSVE FLPSASSSSDAVADVNGSPLTRPSDYHISALPFRCYESIYNAFYRDNRNNPFKTLVDG TVMPVYNKYVTTTDGGADSTNYGIFNRNWELDQFTSAVQSPQQGVAPLVGISSLGKIT VNYEGQDYSFDTETADDADTITKVNVTENVPDAVARSLVNIATSGISINDFRNVNAYQ RWLETNIRRGLKYKDQTLARWGVEPSDSSLDMPEFIGGYSVDVDINTVTNTNGDGSTP LGDYAAQATAFGGSKHKISHYCDQHGFIMAIVSVVPVPVYTQLLPKMFLRESALDYYS PEFGQIGMQAVPYRELCPLELFGSDGYVTKPTDVFGYQRPWYEYIYANDSAHGLFRTD FNQFLLSRTFGAPPTLGPDFLTIKESSLNDVFTVKNRNSILGMVRFNIEAKRPIPSVS VPSL" CDS 2268..2546 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52036.1" /translation="MWSLAPIVALTPCPNKTWRYLPERFRNLPPAVLLRPPPTSVSHS LMEFPTLSLPSRIPEVLTPPTCTTLLSMLLTSSSRLIVKIKIIMADLF" CDS 2644..3663 /inference="similar to AA sequence:INSD:ARQ16053.1" /codon_start=1 /transl_table=11 /product="putative VP2" /protein_id="AXF52040.1" /translation="MFGIDDAVAGIAGLFGNLIQANQANKWNEKQLASQVAENQKDRD FNHSEAEIARNFQADFAREMFDKTNKYNSMSNQVAQLREAGLNPALMYSGSSFAPGTM PSVSAGGASGSGSISPTQYATTDTAAPALSIARQQAEIDNIKASTDKIRNESSILASD ASFRDAWNSGQLVLQGLTIDLSGLDKDLKGNEISKTRAEFQLLQKEYDSFEKHLQLLD TQIESGKLDNLIKSIESTFKSREYEAMLDNLAANTALSKAQANSILQKLPHEIRSLGA DTAYKNALTALCDKQGLVYDAQEGLIKSHTASTDADAETKWRRERRMGGFLYNFLDVL SHLGK" CDS complement(3818..4087) /inference="similar to AA sequence:PDB:5LB7_B" /note="Katanin p80 WD40 repeat-containing subunit; katanin, ASPM, severing enzyme, HYDROLASE; 1.5A" /codon_start=1 /transl_table=11 /product="katanin" /protein_id="AXF52039.1" /translation="MATSDLKIKGKNLTGIIECVEVIDIFGIDTITFSGKCLIIECVK SVSSIEEVTGGHMDARECAIRGHFDETGVYYDSGLQTHRTKLFAT" CDS 3842..5194 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="AXF52042.1" /translation="MCLQPTIIINPRFVKMSSYGTFPCVHMPSRDFFYTRNAFDTFDY KTFSAKRNGVNSKNINDFYAFNDSGEVLPLYLEVACGHCAPCIMRKKNDYKNKLILEQ SCHDCPPLLLTLTYNDENLPDDGVSVVDVQLFLKRWRFHIQHNHVVNQRFRYVCHSEY TPTGTRRPHYHLLIFGYSISPRDILRLEDELLPIWGKGFVDVRLCDHGCFNYVSKYVC KGSNVPPGKNPNFRLSSRRGGGLGVPAFNDYTLYFKLLSSPHPLITVKALGRPFQVFV PKSIRERLCRSPRQFLPHRIINTFKLFCHKCCLLRALMDDIPEFSSHVVRACSLEGIK PPLDSLIPRPIFDKFAALEICPINVAVPYYYRSDAVIHTQSRRALLDEYVKLYKILDD FYLDFDKMYHFTYLRGTVFERWKLSLVRFAEANPDSDPLSVSKFNAILVELQRYNHLA " CDS 4914..5312 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52037.1" /translation="MSLSPIITAVMPSYIPNPVALSWMNMLNFIKFLMISILILIKCI ILLIFAAQSSSAGNCHWFVSQKPTPIVTPFPSLNLTQFLSNFNVITTLLDMSSFDVLS YVFFGLISLAFVSVIIMVIVLCWRTILGKK" CDS 5361..5741 /inference="protein motif:CDD:311960" /codon_start=1 /transl_table=11 /product="peptidase M15" /protein_id="AXF52043.1" /translation="MHNPLKLSEHFTLDEMQKSETARRANIENIAYPAAVENLRRLCE DVLEPIRCAYGSPIYVNSGFRCPRLNNLVGGSNTSYHLKGRAADIRGSDLIRLRSTVV GLINAGVIEPTEYIEYPTFIHLAL" CDS 5494..5754 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXF52038.1" /translation="MSLNPYAVLMVLPSMLTPDSAVPVLTILSEVLIPLTISRVVPLI SVALILFVSVPLSWALSMLVLLNPLNISNIQHLSILLYEKSY" ORIGIN 1 atggctaatc cattcaagcc gagtaactca gccgttcaca agcctaatcg caactcgttc 61 gacctgagtc actccaatca tctgaccttt ggatttggtc agttgattcc ttgtttgtgt 121 caggaatgtc tccccggtga cacattcaaa atcgactccg cccttggtct ccgctttatg 181 cccctggcgt tccctgttca aaccaaagtg cgtgctcacg tccacttctt ctaccagcgt 241 gccaaaaatc tgtggcccga cttcctggat ttcatctatg gcaatgataa gctccagggt 301 cgcaccctcg ttcatcccta cattgacttt ggtccctctg gtaccaaaaa tcttggtctc 361 cttgaaacct gtggtcttgg tgattatctc ggtttgccta ctgttcgtta tagttcctct 421 atctctaaaa ctggaggctc tttcgattat cgcgccccgg ttgctgctaa ctctgtcttc 481 gcttttgatt acaattcttc tcccggttca gccgttcagc ctgttcccag tatttctaac 541 gctgccaatt tcactgctac tgcttttagt ccccttgcgc cttctactgg ttcgtctcct 601 gttcaagatg tcacttaccc aaaccgtagc aaatatggtc ttgctatgtt ttacggtaat 661 ctcactcttt cccagcttgt ctaccctggc caggcccgtt ttactgtcga cttccccgcc 721 ggatggcaat tcgatgattc ttcagtcggc tttgctgtct acgcccgttc ttctactggc 781 aataaaccgc taaaaatcgg ttctgcctct gttgaatctg tttcccgtgt cggaacctcc 841 ggcactgaat tctttacccg tgtggtattc tcttttgagt tcctcagtat ctctgatgag 901 cttatcggta ttgcaaatgg cacttctacg gctcagccgt tttatgtagg tgtttggtct 961 cgcttccaaa ctgtaggcac tacccctcaa ctctctgtag agttcctccc atctgcttct 1021 tcttcttctg atgctgtcgc agatgtcaat ggctcccccc tgactcgtcc cagtgactac 1081 catatctctg cgctcccgtt ccgttgttat gagtccatct acaacgcttt ctaccgtgac 1141 aaccgtaaca acccgtttaa gactcttgtt gatggcacag tgatgcctgt ctacaacaag 1201 tatgttacta ccaccgatgg tggtgctgat tccacaaatt atggtatctt caaccgtaac 1261 tgggaacttg accagttcac ttctgctgtt cagtctcctc agcaaggagt tgcccccctt 1321 gtcggtatct cctcattagg aaaaatcaca gtcaactatg agggccagga ttattccttt 1381 gatactgaaa ctgcagatga tgcagatacc atcacaaagg tcaatgttac tgaaaacgtc 1441 cctgatgctg ttgcccgttc ccttgtgaat atcgccactt ccggtatctc catcaatgac 1501 ttccgcaacg tcaacgccta ccaacgttgg ttggaaacca acatccgtcg tggtctcaaa 1561 tacaaagatc agacccttgc ccgttggggt gttgaaccct ctgattcctc tcttgatatg 1621 cccgagttta ttggaggtta ttctgtagat gtcgacatca acaccgttac caatactaat 1681 ggtgatggtt ctacccccct tggtgattat gccgcccagg ctaccgcctt tggtggttcc 1741 aagcataaga tttcccacta ctgtgaccag cacggattca ttatggccat tgtctctgtc 1801 gtgcctgttc ccgtgtacac ccagttgctt cctaaaatgt tcctccgtga gtcggctctc 1861 gactactatt cacctgagtt cggtcaaatc ggtatgcagg ccgttcctta ccgtgaattg 1921 tgtcccctgg agttgtttgg ttctgatggc tatgtcacca agcctacaga tgtcttcggt 1981 tatcagcgtc cctggtatga gtatatctac gcgaatgatt ccgcccacgg tctcttccgt 2041 actgacttta accagttcct gttgtcccgc acattcggtg cgcctcccac cctcggccct 2101 gacttcctca ccatcaaaga gtcctctttg aatgatgtgt ttacagtcaa aaaccgtaat 2161 tccatccttg gtatggtgcg tttcaacatt gaggccaaac gtcccatccc atctgtctct 2221 gttccatccc tctaagtcta ttcctatgtt ctctaaaatc cgtaaatatg tggtcacttg 2281 caccgattgt tgctctgacc ccttgcccga acaaaacctg gcgatatctc cccgagagat 2341 tcaggaactt accgcccgcg gtgttgctgc gtcctcctcc aacctcggtc tctcattctc 2401 tgatggagtt cccgaccctg tccttgccct cgagaatacc cgaggtattg accccgccga 2461 cctgtacaac tcttctctcg atgctgctga caagctcgtc aaggctcatc gtaaagataa 2521 agattattat ggctgatttg ttttgatttg taaggccctt ggtgtgctgc tctcttcggt 2581 catcccgcca tcggccttac atttcctttt attcacttaa aaaactgtaa cttctcaatt 2641 attatgtttg gtattgatga tgctgtagct ggcattgctg gcttatttgg caatctcatc 2701 caggcaaacc aggctaacaa atggaatgaa aagcaattgg cctctcaggt tgccgaaaat 2761 cagaaagacc gtgatttcaa tcactctgag gctgagattg ctcgtaactt ccaggctgat 2821 tttgcccgtg agatgttcga taaaacgaac aaatacaact ctatgtctaa ccaggtagcc 2881 caacttcgtg aagctggtct taaccctgcc cttatgtact ccggtagttc atttgctccc 2941 ggtactatgc catctgtttc cgctggtggt gcctccggct ccggttccat ctcccccact 3001 cagtatgcca ctactgatac cgctgcccct gccctgtcta ttgctcgtca gcaagccgag 3061 attgataaca ttaaggcttc tactgataaa attcgtaatg aatcctctat tcttgcgtct 3121 gatgcttcct ttcgtgatgc ttggaattct ggtcagcttg ttctacaggg tcttaccatt 3181 gacttgtctg gccttgataa agatttaaaa ggtaacgaaa tctctaagac tcgtgctgag 3241 tttcaattgc ttcaaaagga atatgattct tttgagaaac atcttcagtt gcttgatact 3301 caaattgagt ccggtaagct tgataatctc attaagagta ttgagtctac ttttaaaagt 3361 cgtgagtatg aagctatgct tgacaatctt gctgcaaata ctgctctttc taaggctcag 3421 gccaattcta ttcttcaaaa gcttccgcac gaaatccgtt ctttaggtgc tgatactgct 3481 tataagaatg ctttgactgc tttgtgcgat aaacagggtc ttgtttatga tgctcaggaa 3541 ggtttaatta agtctcatac tgcttctact gatgctgatg ctgaaacaaa gtggcgtcgt 3601 gagcgtcgta tgggtggttt cctttataat tttcttgatg ttcttagtca tcttggaaaa 3661 taatcccgcc cccgcaacaa aaagatggag aatgtaggta acctaacacc tactccttct 3721 cctctctctc catcaccctc caaggatagc taaggcagaa tgtttcctta gccatatctt 3781 catcttgtta ttatatggcg aactgacaga acccctgtca cgtcgcgaaa agtttagtcc 3841 tatgtgtctg caacccacta tcataataaa cccccgtttc gtcaaaatgt cctcttatgg 3901 cacattcccg tgcgtccata tgccctcccg tgacttcttc tatactcgaa acgcttttga 3961 cacattcgat tataagacat tttccgctaa acgtaatggt gtcaattcca aaaatatcaa 4021 tgacttctac gcattcaatg attccggtga ggttcttccc ctttatcttg aggtcgcttg 4081 tggccattgc gccccctgta ttatgcgtaa aaagaatgat tacaaaaaca aattgatcct 4141 ggagcaatct tgccacgatt gtcctcccct cttgcttacc cttacttaca atgatgaaaa 4201 cctccctgat gatggtgtct cagttgtcga tgttcaattg ttcctcaaaa gatggcgatt 4261 ccatatccag cataaccacg tcgtaaacca acgcttccgt tatgtctgtc attccgagta 4321 cacacccact ggtacccgtc gcccccatta ccatctcctt atcttcggtt attctatcag 4381 tccccgcgat atcctccgtt tggaagatga gttactcccc atttggggta aaggtttcgt 4441 agatgtccgt ctctgtgatc acggttgttt taactacgtc tccaaatatg tctgcaaagg 4501 ttccaatgtc cctcctggca aaaatcctaa tttccgtctg tcctcccgcc gtggaggcgg 4561 tctcggtgtc cccgcattca atgattatac cctttacttc aaactactca gttctccgca 4621 tcctcttata actgttaagg ctcttggccg tcctttccag gtctttgtcc ccaagtctat 4681 ccgtgagcgt ctctgtcgct ctcctcgcca gttcctcccc catcgcatca tcaatacgtt 4741 caaattgttt tgtcataaat gttgtctctt gcgagctttg atggatgata tccccgagtt 4801 ctcctcccac gttgtccgcg cttgttccct cgagggaata aagccccctt tggattctct 4861 cattccccgc cctatcttcg acaagtttgc tgctcttgaa atctgtccta tcaatgtcgc 4921 tgtcccctat tattaccgca gtgatgccgt catacatacc caatcccgtc gcgctctcct 4981 ggatgaatat gttaaacttt ataaaattct tgatgatttc tatcttgatt ttgataaaat 5041 gtatcatttt acttatcttc gcggcacagt cttcgagcgc tggaaactgt cactggttcg 5101 tttcgcagaa gccaaccccg atagtgaccc cctttccgtc tctaaattta acgcaattct 5161 tgtcgaactt caacgttata accaccttgc ttgatatgtc ttcttttgat gtattatctt 5221 atgttttttt tggccttatt tcgctggctt ttgtctcagt cattattatg gtgattgtcc 5281 tctgttggcg tacaattctt ggtaaaaaat agttttacca taatccccat tatgtaacaa 5341 atgtaaaaat atcaaaaatt atgcacaacc ccctcaaact ctcagagcat tttacgcttg 5401 atgagatgca aaaatcagag actgcccgtc gtgccaatat agaaaacatt gcatacccgg 5461 cggcagttga aaatcttcgc cgtctctgtg aagatgtcct tgaacccata cgctgtgctt 5521 atggttctcc catctatgtt aactccggat tccgctgtcc ccgtcttaac aatcttgtcg 5581 gaggttctaa tacctcttac catctcaagg gtcgtgccgc tgatatccgt ggctctgatc 5641 ttattcgtct ccgttccact gtcgtgggcc ttatcaatgc tggtgttatt gaacccactg 5701 aatatatcga atatccaaca tttatccatc ttgctttatg aaaaaagtta ttgacttcct 5761 ccgcgccatt gtgtggattc tctgtggtct cttcaaccgt cacaaagatc cccgctgtta 5821 acggttcgtt cgttgttcgg acggggacca cgggggggat tccggctttg ccggaaaacg 5881 gaggcggcgc gtagcatagc cgaagtggtc atctctcctc cccccccgtg gtcagggtcc 5941 cgtccggact cgcttaggta tcttaaccac ccacggtaca aattacgtac taaagttatc 6001 aataaattaa attgttatt //