LOCUS MH616714 4615 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctbf712, complete genome. ACCESSION MH616714 VERSION MH616714.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4615) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4615) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH616714.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 31.374431x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4615 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbf712" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS 1..1647 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH73337.1" /translation="MFGIGSGKLPTVMKHDFSQVPKADIPRSSFDRSHGFKSTFNAGY LVPFFVDEALPGDTFSLRASLFARLATPVAPVMDNLHCDTFFFAVPIRLIWDNFKKMM GEQEPNTFTSYLVPIMTSPTGGYAVQSLQDYMGLPTAGTYGVDATKTVSHSALWTRAY NLIYNEWFRDQNLQASVTVDKGDGPDDPANYVLLRRGKRHDYFTSCLPWPQKGTAVSI PLGTSAPIRGVNGSGTVDDLVYLFGDSNGAFVRSDTTPQTNGNLRFGGAGSIAANATM KWQQASDNGGSVDGYNIADLSAATAATINSLRQAFQLQRLYERDARGGTRYTEIVRSH FGVTSPDARLQRPEYLGGGSTPITFTPIPQTSVTAATPQGNLAAMATMSGTGHGFSKS FTEHCVLIGLVSVRADLNYQQGLNRMWSRRSKYDFYWPALSHVGEQAVLNKEIYCRGD TNDALVFGYQEAYAEYRYKPSVITGQFRSTYSTPLDVWHLGQKFTALPTLGSTFIVEN PPVDRIIAVAGSHFLFDAYLQLKCARPMPTYSVPGMIDHF" CDS 1704..2426 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH73338.1" /translation="MGAMLGPLLGGAFGFAGSAVSSATNARNTEATNATNLDISRAQM DFQERMSSSAHQREVADLRAAGLNPILSAGGGASTPSGASAQMQAPRVENSIGAGVSS ALDAARYKREKEQSDSQINLMDAQEQDSIESAALKAQNAKTAAANTRVAEADATVAES RVATEKAKARLEKATAEKDTPYAESGGDALMKRAGTVGGWISGAKTLLDAVTPKRTPK VTPVDEDTILERARGRGMRVNY" CDS 2570..3076 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXH73339.1" /translation="MASGVKVVRVVRNIFDAYEDPGIDCSGDPGCTKQSFKEECDINS IVEKAQRTGQLPQMIAKDPMYGDFSGAMDYQSALNLVLKAESQFMGLEARVRDRFMND PSAFLAFMEDPNNGPEIVKLGLAAPRKPSGAPSGGVAQGGVGQPSASAGGQAKGPDQG SGQVAGNS" CDS 3301..3564 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73334.1" /translation="MLCRSVAIWAVSSLVSCSLRQRRRLTGRTAWPLCVVALDFNALF QTTKRLPVKGGEPGYRKAKYRLQCQAGGSGSACRSPLRTVYWV" CDS 3422..4315 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH73335.1" /translation="MPCFKPLKGYRSRVVNPDTGRRSIVFNVRQGDQAQPVDLPCGQC IGCRLERSRQWAVRCLHEASLHKSNCFITLTYSQDFLPRDGSLCLKHYQDFMKRLRKR FGSGIRFFHCGEYGEKFSRPHYHACLFNFDFDDKVLFKVVGDSRLYVSQALSELWPFG FSTIGDVTFESAAYVARYITKKITGDGAFAHYGDRVPEYTTMSRRPGIGKGWYEKFRS DVYPCDSVTLRGGREMKPPKAYDRYFEIDFPDVMKEVKFKRIEVAKARALLEPWYRLS VKEEAQELSFKRLKRSLENDL" CDS 4305..4613 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH73336.1" /translation="MIYKVFSLYDSAVEAYNVPMFLRTNGEAIRSLTAAVNDSESTIC KWPDQYVLFELGTYDDSDGSFCPLSAPKSLGSALQYKAEPKGELPLEAAISKIRQQGV " ORIGIN 1 atgtttggta tcgggagcgg caagttgcct acggtgatga agcacgattt ttcgcaggtt 61 cctaaagcgg acattccgcg gtcgtcgttt gatcgtagtc atggttttaa atcgacgttt 121 aatgctgggt atcttgttcc gttttttgtc gatgaggcac taccgggtga tacgttttcg 181 cttcgtgcgt ctttgtttgc tcggcttgcc actcccgttg cccctgtgat ggataatttg 241 cattgtgata cttttttctt tgccgttcct attcggctta tttgggacaa ttttaagaag 301 atgatgggcg agcaggagcc caatacgttt acttcttatt tggtccctat tatgacttcg 361 ccgactggcg ggtatgctgt gcagtctttg caggactata tgggtctgcc tactgctggc 421 acttatggtg ttgatgctac caagacggtg tctcactcgg ctctttggac cagggcttac 481 aacctgattt acaatgagtg gttcagggat cagaatcttc aggcttcggt tacggttgat 541 aagggtgacg ggccggatga tccggctaat tatgttcttc ttcgtcgtgg gaagcgccac 601 gactatttta cttcctgcct gccctggcct cagaagggga ctgctgtttc tattcctctt 661 ggtacgtctg ctcctattcg tggtgtgaat ggttctggca ctgtggatga tttggtttat 721 ttgtttggtg attctaatgg tgcttttgtg cggtctgata ctaccccgca gactaatggt 781 aatttgaggt ttggtggtgc tggcagtatt gctgctaacg cgacgatgaa gtggcagcaa 841 gctagtgata acggtggttc tgttgatggt tataatattg ccgatctttc ggctgctact 901 gctgcgacga ttaattcttt gcggcaggct tttcaattgc agaggttgta tgagcgtgat 961 gcgagaggtg gtactcggta tacggagatt gttcgaagtc atttcggtgt cacttcgcct 1021 gatgctcggc ttcagcgccc tgagtatctt ggtggtggtt ctacgcctat tacttttacg 1081 cccattccgc aaacgtcggt tactgctgct accccgcagg gtaatttggc ggctatggct 1141 acgatgtcag gaacgggaca tggttttagt aaatcgttta cggagcattg tgtattgatt 1201 ggtcttgttt cggttcgggc tgatttgaat tatcagcaag gtttgaatcg gatgtggtcg 1261 cggcggtcga agtatgattt ttattggccg gcgttgtctc atgttggtga acaggctgta 1321 ttgaataagg agatttattg tcgaggtgat accaatgatg ctttggtgtt cggatatcaa 1381 gaggcctatg ctgagtatcg ttataagcct tctgttatta ctggccagtt taggagtact 1441 tacagtactc cccttgatgt gtggcacttg ggtcagaagt ttacggcgct gcctacgctt 1501 gggtcgacgt ttattgtgga gaatccgccg gttgaccgga ttatagctgt agcaggtagt 1561 catttcttgt ttgatgctta tttgcagttg aagtgcgctc gtcctatgcc gacgtattct 1621 gttccgggta tgattgatca tttctaacca cgtccacaca ggggaggggg tttgtggttt 1681 cccctcccca tttagaggtg tttatgggtg ctatgcttgg tccgcttctt ggcggtgctt 1741 ttgggtttgc tggttcagct gtctcgagcg ctactaatgc gcgaaatacc gaggctacta 1801 atgctacgaa tttggatatt tctcgtgctc aaatggattt tcaggaacgt atgtctagtt 1861 cggcgcatca gcgcgaggtt gctgatttgc gtgccgcagg gctgaatccg attttgtctg 1921 ctggcggcgg agccagcact ccttctggtg catcggctca gatgcaggcg ccgcgtgtag 1981 agaattctat cggcgctggt gtttcttctg cgctggatgc tgctcgttat aagcgtgaga 2041 aagagcagag cgactcgcag attaatttga tggatgccca agagcaggat tctatagagt 2101 ctgctgcgct gaaagcgcag aatgcgaaga ctgctgcggc taatactcgt gttgctgagg 2161 cggatgctac tgtagccgag tctcgggtag ctactgagaa ggctaaggct aggctggaga 2221 aggctacggc ggagaaggat actccgtatg cggagtccgg tggtgatgct cttatgaaga 2281 gagcgggtac cgttggcgga tggatatctg gcgctaagac actgcttgat gcggttaccc 2341 cgaagaggac tcctaaggtt acccccgtag atgaggatac gattttggag cgagctcgtg 2401 gtagggggat gcgtgttaat tactgatgat gttcgggcgc ggttttcggc gtatttggat 2461 cggattgagt atcgttgtct tgttgacgct ggcgatcgtg gtttggagtt tgttgaggtg 2521 gttgttgacg atgtaaaacc tcgtttttac gagaaggaag gtatgcaata tggcttctgg 2581 tgtgaaggta gttcgggttg tgcggaatat ttttgacgct tatgaggatc ccggtattga 2641 ttgttccggg gatccgggtt gtacgaagca gtcttttaaa gaagagtgcg atattaattc 2701 gatcgttgag aaggctcaac gtactgggca gttgccccag atgattgcta aggatcctat 2761 gtatggcgat ttttcaggtg ctatggatta ccaaagtgcg ttaaacttgg tgttgaaggc 2821 cgaatcccag tttatgggcc ttgaggctcg tgttcgggat cggtttatga atgacccgtc 2881 tgcctttttg gcgtttatgg aggatccaaa caatggtcca gagattgtta aacttggtct 2941 tgcagcccct cgtaagcctt ctggtgcccc gtctggtggc gtggctcaag gaggagttgg 3001 acagcctagc gcaagcgctg gagggcaagc taaaggacca gatcagggat caggtcaagt 3061 cgcaggtaat tcttaataat ggacctaaaa gttgactatg aagatcaacg ttggttcgat 3121 ttgtcgcttg acgcagcttg taaagagcta gtcgggtggc atcgccatct cggtcctatt 3181 cgagctggcg agagtaacag ttcactactt gatgtaactg ttacgactga caccaaagtt 3241 tggtggcagt ctttttttag gttccgtata atacgggacc tttttagtta gtttggaggg 3301 atgttatgtc gaagcgtcgc catatgggcg gtaagcagtc tcgtaagctg ttcactaaga 3361 cagcgaagaa ggttaaccgg aagaacggca tggccgttat gcgtggtggc attagacttt 3421 aatgccttgt ttcaaaccac taaaaggtta ccggtcaagg gtggtgaacc cggataccgg 3481 aaggcgaagt atcgtcttca atgtcaggca gggggatcag gctcagcctg tcgatctccc 3541 ttgcggacag tgtattgggt gtaggctcga acgctcgcgt cagtgggcgg tacgatgttt 3601 gcacgaggct agtttgcata agtccaattg ttttattact cttacttatt ctcaggactt 3661 tttgccccgt gatgggtctt tatgtcttaa gcattatcag gattttatga agcgtctacg 3721 taagcgcttt ggttctggta ttcgtttttt tcattgtggg gagtatgggg agaagttttc 3781 gcgtccccat tatcatgctt gcctttttaa ttttgatttc gatgacaagg ttttatttaa 3841 ggttgttggt gattctcgtt tgtatgtttc tcaggccctt agtgagttgt ggccgtttgg 3901 tttttctact attggtgatg ttacttttga atccgctgcc tatgtggcgc ggtatattac 3961 gaagaaaatt acaggggatg gcgcatttgc gcattatggg gacagagttc ccgagtatac 4021 gacgatgagt cgtaggcccg gtatcggtaa gggttggtat gagaagtttc gtagtgatgt 4081 ttacccctgc gattcggtta ccttacgggg tggtcgtgag atgaagcccc ctaaggcgta 4141 tgatcgttat tttgagattg actttcctga tgtgatgaag gaggtaaagt tcaaacgcat 4201 tgaagttgcc aaagctaggg cactcttgga accttggtac cgattatcgg tcaaggaaga 4261 agctcaagag ttatccttca agcgtcttaa gaggagtctc gaaaatgatt tataaggtgt 4321 tttcgttgta tgatagtgct gttgaggcct ataatgttcc gatgtttctt cgcactaatg 4381 gtgaggctat ccgttctttg acggcagccg tgaatgattc tgagtctact atttgtaagt 4441 ggcctgatca gtatgttttg tttgagttgg ggacgtatga tgattctgac ggttcgtttt 4501 gtccgttgag tgcccctaag agtttgggtt ctgctttgca gtataaggcg gagccaaagg 4561 gtgagcttcc ccttgaagcg gctatttcta aaattcgtca acagggagtt taatt //