LOCUS MH617601 4536 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctbg758, complete genome. ACCESSION MH617601 VERSION MH617601.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4536) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4536) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH617601.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 27.572972x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4536 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbg758" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS 1..1587 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH77431.1" /translation="MSNGKRSVMVHTFSQIPDARIPRSQFNRSHGYKTAFDSGYLIPV FVDEALPGDTFNLRMHAFTRMSTPIVPVMDNMYLETFFFAVPIRLIWANFKKFMGEQA NPGDSISYLVPTITSPASGWTVGSLSDYLGLPTVGQVAGANTTTSVSLWHRAYNLIWN EWFRSEALQNSVTVDTGDGPDTAANYVLLRRGKRHDYFTSALPWPQKGSTAVSLPLGT SAPVVTSSLDIKMKVVADGNVDRTLTGNVAGVKTFLNGLGADGAVRFGSESGLTADLS TATAATINQLRQSIATQQLLERDALGGTRYTEIVRSHFGVVSPDARLQRPEYLGGGSS PINFHPVAQTSPTSGSAAQGDLAAFATGSISGHGFVKSFTEHCVLLGLANIRCDLTYQ QGQNRMFNRSTRYDFYWPAFANIGEQTVLNREIYMDGSANDTSVFGYQERYAEYRYKP SVITGIMRSTAASTVDVWHLAQKFTALPTLNSTFIQDTPPLTRVMAVNTEPQFTFDAY YDLKCARPMPVYSVPGLDRL" CDS 1584..2345 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH77432.1" /translation="MSIWGALGALGGFALGGPLGAVIGGGVGGGIDSSGAQADANATN LQSVREQMAFQERMSNSAYQRSMADMGKAGLNPMLAFSQGGASTPVGSAAKVDAVPPP VTGDTVAKAISAVQGVKGVENISADTELKGSQVDVADSQVAVNEAQAEKVTANAIEAK KNAELIDEQKKQVREHTARAKRDNAIQGSREAIDKKLSGVDAVLDRIEQGVGVAGTAV RSMFRGKQGTSKGSGYNSGFEKGYEKGTRAGTPVD" CDS 2363..2833 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXH77433.1" /translation="MADRKVVARNRFSARDASGDILCSEPTLAVQASKDECDINVIVR KYLRTGELPGLRQGVYADLSGMVGLQDALHMVNEAEQAFMELPAEVRRYFDNDPVKLV EFASDSKNLEKAIELGLAEKPVVTPPSQPVPVPGAGQAPQNGVPAGSGGAPKGA" CDS 3297..4220 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH77429.1" /translation="MACFNPLVAYRAKMPNAVTGKFSMVFNSRDAACPDDPLKLPCGQ CIGCRLERSRQWAIRCVHEASLYERNCFITLTFAPEFLPKSGSLSKRDFQLFMKRLRK RFGAGARYFMCGEYGELNRRPHYHACLFNFDFPDRELWSVRGDVRLYVSRSLSELWPF GFSTIGDVTFDSAAYVARYITKKITGDMASSHYERVDPVSGEVNDLLPEFTTMSRRPG IGRGWFDRFRSDVFPHDRVVLDGRELRPPKYYDRIFDVDFPGVMEDVKEARVKGMKAA AKDFTFERLRTREQHQFLMFDKLKRGYENES" CDS 4204..4497 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH77430.1" /translation="MKMKASLYCVYDSKAEVYMRPFVAQSNAAAIRSFADEVNSKSSD SVLAAHPEDYVLFMLAHWDECNGVLDVLEAKRSLGVGIDFVRDNTVPRIGAVN" ORIGIN 1 atgtctaacg gtaaacggtc agtgatggtt catacttttt cgcaaattcc ggatgcgcgt 61 attccgcgtt cccagtttaa tcggtctcat ggttataaga ctgcttttga ttctgggtat 121 ttgattcctg tttttgtgga tgaggcgttg cctggtgata cgtttaattt acgcatgcat 181 gcttttactc gcatgagtac tccgattgtc cctgttatgg acaatatgta tttggagact 241 tttttctttg ctgttcctat tcgtttgatt tgggctaatt ttaaaaagtt tatgggtgag 301 caagcgaacc ctggggattc tatttcttat ctggttccga ctattacttc ccctgcttct 361 gggtggactg tcggttcgtt gtcagattat ttgggtttgc ctactgtggg tcaagttgct 421 ggtgctaata ctactacttc tgtttcgtta tggcatcgtg cttacaatct gatttggaat 481 gaatggtttc gttcagaggc gcttcagaat tccgtgactg ttgatactgg cgatggtcct 541 gatactgctg ctaattatgt tttgttgcgt cgtggtaagc gtcatgatta ttttacgtcg 601 gcgttgccct ggcctcagaa gggttctacc gctgtttcgc ttcctttggg taccagtgct 661 cccgttgtta ctagtagttt agacattaaa atgaaggttg ttgctgatgg taacgtggat 721 cgtactctta ctggtaatgt tgctggtgtt aagacgttct tgaatggtct gggtgctgac 781 ggtgctgttc ggtttggtag tgagtctggt ttgactgctg atttatctac tgctactgct 841 gctacaatta atcaattacg tcagtctatt gctactcagc agttgttaga gcgtgatgct 901 cttggtggta ctcgttatac tgagattgtt cgtagtcatt tcggtgttgt ttctcctgac 961 gctcgtttgc agcgtcctga atatctgggc ggcggtagtt ccccaattaa tttccatccc 1021 gttgcccaga cttcaccgac ttctggtagt gctgcgcaag gtgatcttgc cgcttttgct 1081 actggttcta tttcgggcca tggttttgtt aagtcgttta ctgaacattg tgttctttta 1141 ggtcttgcta atattcgttg tgatcttact tatcaacaag gccagaatag gatgtttaat 1201 cggtctactc gttatgattt ttattggccc gcttttgcga acattggtga gcagactgtt 1261 ttgaatcgtg aaatttatat ggatggttct gctaatgata cgtctgtttt cggatatcaa 1321 gagcgttatg cggagtatcg ttataagcca tcagttatta ctggtattat gcgttctact 1381 gctgcttcta ctgttgatgt ttggcatttg gcgcagaagt ttacggctct acctactttg 1441 aattctacgt ttattcagga tacccctcct cttactcgtg tgatggctgt taatactgaa 1501 cctcaattta ctttcgatgc ttattacgat ctgaagtgtg ctcgtcctat gcctgtttat 1561 tctgtccctg gattggatcg tctatgagta tttggggtgc tctaggtgct cttggaggtt 1621 tcgctttagg tggccctttg ggtgccgtta tcggcggcgg cgttggcggt ggtattgact 1681 cttctggtgc ccaagctgac gccaatgcta ccaatttaca atctgttcgt gagcagatgg 1741 cttttcaaga gcgtatgtct aattctgctt atcagcgtag catggccgat atgggtaaag 1801 ctggtttgaa tcctatgttg gctttttctc agggtggtgc ttctactcct gttggttctg 1861 ctgctaaagt ggatgctgtt cctcctcctg tgactggtga tactgttgct aaagctattt 1921 ctgctgttca gggtgttaag ggtgttgaga atattagtgc tgatactgag ttaaaaggtt 1981 ctcaggttga tgttgctgat tctcaggttg ctgttaatga ggctcaggcc gagaaggtta 2041 ctgctaatgc tatcgaagct aagaaaaatg ctgagcttat agatgagcag aagaagcaag 2101 tgcgtgagca tactgcgagg gctaagcgtg ataacgctat ccaagggtct cgtgaggcta 2161 ttgataagaa gttgtccggt gttgatgctg ttttagatcg tattgaacaa ggtgttggtg 2221 ttgctggtac tgctgttcgt agtatgtttc gtggtaagca aggtactagt aagggttctg 2281 gttataattc tgggtttgag aaaggttatg agaagggtac tcgtgctggt actcctgttg 2341 attgattaag aaagggtgtt ttatggcgga tcgtaaagtt gttgctagga atcggtttag 2401 tgctcgtgat gctagtggtg atattttatg tagtgaacct acattagctg ttcaagcttc 2461 caaggatgag tgcgatatca atgtgattgt tcgtaagtat ttgcgtactg gtgaattacc 2521 tggtttgcgt caaggtgttt atgctgattt gtctggtatg gtaggtcttc aagatgcttt 2581 gcatatggtg aatgaagctg agcaagcttt tatggagttg cctgctgagg tgcgtcggta 2641 ttttgacaat gatccggtta agttagttga gtttgcgtcg gatagtaaga atcttgaaaa 2701 ggctatagag ctaggtttgg ctgagaagcc tgtggttacg ccccctagcc agcctgttcc 2761 cgttcctggg gccgggcagg cccctcagaa tggggttcct gcgggtagcg gaggggcacc 2821 gaaaggtgcc tagaccagtt catcactaga tgtaactggt ctgactgaca ccattcggtt 2881 gtcagtcggg gtttaagggg ttaccctttt agttggaggt gacctatgga tctgtttgat 2941 attattcgtg gcattagtag tcatactatg tctgttggtg atgttatttt gaatttggtt 3001 atttttttcg ggggtgctct tgcacaaaag aagaaaggcg acttggagag aaaagtgtag 3061 tgtgttatta ggtggtttcc cgcagcctag tgagggggct agggaaggct ccctcacacc 3121 tatgcgggat attattgaac aaatggattg gtttaaactt tggaaagagg gctattatgg 3181 cgtatcgcaa gaagttgtcg aagagcgcgt cgcgaaagat gtttaagcgt tcttcaaatc 3241 gtgttcataa aaagaattta aagaaaccca ttatgcgcgg tggaatccgt ttgtaaatgg 3301 cttgctttaa cccgttggta gcgtataggg ctaagatgcc caacgctgtg acggggaaat 3361 tttcgatggt gtttaattct cgggatgctg cttgtccaga tgatcctttg aagttgcctt 3421 gtggtcagtg tattggatgt cgtttggagc gttctaggca gtgggctatt cgttgtgttc 3481 atgaagctag tttgtatgag cgtaattgtt tcattacttt gacgtttgct cctgagtttt 3541 tgcctaagtc gggttccttg tctaagcgtg attttcagtt gtttatgaag cgtttgcgga 3601 aacgctttgg tgcaggtgct cgttatttta tgtgtggtga gtacggtgag ttaaatcgtc 3661 gtcctcatta tcatgcgtgt ttatttaatt ttgattttcc cgatagggag ctttggagtg 3721 ttcgtgggga tgttcgtttg tacgttagta ggtctttatc tgagttatgg ccttttggtt 3781 tttctacaat aggtgatgtg acttttgatt cggctgctta cgtcgcaaga tatattacaa 3841 agaagattac gggtgacatg gcgtctagtc attatgagcg tgttgatcct gtgtctggag 3901 aagttaatga tttattgcct gagtttacga ctatgagtcg gaggccgggt ataggtcgtg 3961 gttggtttga tcgttttagg tctgatgtgt ttccacatga tcgcgttgtt ttagatggtc 4021 gtgagttacg tcctccgaaa tattatgatc gtatttttga tgttgacttt cctggtgtga 4081 tggaagatgt gaaagaggcg cgggtaaagg gaatgaaggc tgctgcaaaa gattttactt 4141 ttgagaggtt gcgcactcgt gagcagcatc aattcttaat gtttgacaag ttgaaaagag 4201 gatatgaaaa tgaaagctag tttgtattgt gtttacgata gtaaggctga ggtttatatg 4261 cgtccttttg ttgctcagtc taatgcggct gctattcgga gttttgctga tgaggttaat 4321 tccaagtcta gtgattcggt gttagctgct catccggagg attacgtttt gtttatgtta 4381 gctcattggg atgaatgtaa tggtgttttg gatgttttag aggctaagcg ttcgcttggt 4441 gttgggattg actttgtacg tgataatact gtgcctcgta ttggtgctgt taattaatgt 4501 ttttggtgtt ttaaatatat tggaatagga gcatgc //