LOCUS MH616795 4536 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctbh757, complete genome. ACCESSION MH616795 VERSION MH616795.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4536) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4536) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH616795.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 33.634700x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4536 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbh757" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS 1..1632 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH73746.1" /translation="MYRNKSVSVHQFAMVPKSNVPRSTFNREQAHKTTFDSGYLVPFY VDEVLPGDTFKLKATVFARLSTPIFPVMDNMHLDTFYFFIPYRLVWQNWVRFMGEQDN PADSISYVIPTITSAANGFVAGSIYDYCGLPTVGQVGAGNTVKCNALPLRAYNLIYNE WFRDENLQNSVGMGSTNNPNDIGDGPDPLTNYVLLRRGKRHDYFTSCLPWPQKGSTSV TLPLGTSAPIRYDGVVPGTTTAHAVGVTSSVAGANRILFTGGGLGGDIGVGSTAPAAG YTLYADLSQATAATINQLRQSFAIQELLERDARGGTRYTEIVRSHFGVLSPDARLQRP EYLGGDSVPVVINPIAQTGATGATGTTSPLGNLAAMGTVLARNHGFHTSFVEHGIVMG IASIRADLSYQQGLRKMWSRSTRYDFYFPEFAHLGEQAVLNQEIYCDGSANDSNVFGY QERWAEYRYLPSLITGKFRSTTTGTLDAWHLAQKFATLPTLNTTFIQDNPPVQRVVAA GALAAGQEFIADFFINCVTTRPMPLYSVPASLSRF" CDS 1635..2468 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73742.1" /translation="MGLFDGFGTSLVGGLLGFAGSDNTNQTMMDIAQANNETNIDIAK HGIQYRMQDYKNAGLNPALAYNSGPINMPNLSTPNLQNSGAAAAQGMQSGQSAAIAAA QIDKLKSDTSLSNAQALKVQTDTRLTDAQARSAEYQADLNDFMRATGSFNLAHEDINA RTLRAQYDSLESANNIDALQHLNSFAQSLGFNNFKTALGSQDFIQQLQDYKAQAQSMS LQGLNFPEAQANAAFYKSDFGKSIAPYIHSAQGISSVGTDLIGTGINLFKKRPFFHLG K" CDS 2471..2920 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXH73743.1" /translation="MTKIFLRTAYNFDVDANSIDFALSGFEPTLTVQDAKDDCDINVI MERFGKGIPVPTNLKTPMQGDFTGVMDYQSSLNLIIEADEAFMQLPADVRFRFNNDPG QFLDFVSDDTNIDEARKMGLLIPKSSLEQDDNPAKKGDSASDSAPVA" CDS 3345..4061 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH73744.1" /translation="MHSANSFITLTYAPEHFPENGSLDYKHFQRFLKRLRARVGPIRF YMAGEYGEQFLRPHFHALIFGYDFPDKVPLGMVSSDNMIYSSDLLFDLWPYGFSSVGE CNFQTAAYVARYVMKKITGRQAIPHYEVLNYDTGEITRRVPEFNKMSLKPAIGSTWLA KYFSDVYPHDRVIINSVPTKPPRMYDKILAREFPDIHEDIKYQRFVDSMDKLADNTDA RLAVREVCCKARLSQLKRTF" CDS 4088..4498 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH73745.1" /translation="MTKSWVIFVLLFLIRFKFSAVLVLSMLVVLQCLMLILMRLTVFN RFLLRSVVNMNIYIVRDVKAGAFNNPFVQQSDGAAIRSFQQEVNRVDTNNMINLYPAD FSLYRTGSYDPDLGVISALSQPDLVVEAVSLVIS" ORIGIN 1 atgtatcgca ataaatctgt ttctgtgcat caattcgcga tggttcctaa gtctaatgtg 61 cctcgttcca cgtttaatcg tgaacaagct cacaagacaa catttgattc tggttatctt 121 gtcccgtttt acgtggatga ggttcttccc ggtgacacgt ttaagcttaa ggctactgtg 181 ttcgctcgtc tttctacgcc tattttccct gtaatggata atatgcatct tgataccttt 241 tattttttta ttccatatcg tctagtttgg caaaactggg ttcggttcat gggtgagcag 301 gataatcctg ctgattctat ttcttatgta atcccgacta ttacgtctgc tgcaaatggt 361 tttgtagccg gatctattta tgactactgt ggtttaccta ctgtcggtca agtcggtgct 421 ggtaatactg ttaaatgtaa tgctttacca cttcgtgctt ataatctgat ttacaacgag 481 tggtttcgtg atgaaaatct tcaaaactct gttggcatgg gttctactaa taatcctaat 541 gatattggtg atggccctga ccctttgact aattatgttc ttcttcgtag gggcaagcgc 601 catgactatt tcacatcctg tttgccgtgg cctcaaaagg gtagtacttc cgtcacctta 661 ccgcttggca cttccgcacc aattagatac gatggtgtcg tgccgggtac tactactgct 721 catgctgttg gtgttacttc ttctgttgcc ggtgctaatc gtatactttt cactggtggt 781 ggtttaggcg gtgatattgg cgttggttct actgcgcctg ctgctggcta tacactttat 841 gctgatcttt ctcaagctac tgctgctacc ataaatcaac ttcgtcaatc ttttgctatt 901 caagagcttt tagagcgtga tgctcgcggc ggtactcgtt atactgaaat cgttcgctct 961 cattttggtg ttttgtctcc cgatgctcgt ctccaacgtc ctgaatattt aggcggtgat 1021 tctgttcctg tggtcattaa tcctattgct caaactggtg ctactggtgc tactggcact 1081 acttctccgt tgggtaatct tgcggccatg ggtactgttc ttgctcgcaa tcatggtttc 1141 catacatctt ttgttgaaca tggtatcgtg atgggaattg cttctattcg tgctgacttg 1201 tcttatcagc agggtctgcg taagatgtgg tctcgttcta ctcgttacga cttttatttt 1261 cctgaatttg ctcatttggg tgaacaagct gttctgaatc aggaaattta ctgtgatggt 1321 tctgctaatg attctaatgt ttttggttac caagaacgct gggcggaata tcgttatttg 1381 ccttctttga ttactggtaa attccgttct actactactg gtactttaga tgcttggcat 1441 ttggcgcaga aatttgctac tttgcccact cttaatacta ctttcattca ggataatccc 1501 ccggttcaac gcgttgttgc tgctggcgct ttggctgctg ggcaagagtt tattgctgac 1561 ttttttatta attgtgtgac tactcggccg atgcctctct attccgttcc tgcttctctt 1621 tcgaggtttt agccatgggt ctcttcgacg gttttgggac atctttggtc ggcggccttt 1681 taggtttcgc cgggtcagat aatactaatc aaactatgat ggatatcgct caggctaata 1741 atgagactaa tattgatatc gccaaacatg gtattcagta tcgtatgcaa gattataaaa 1801 atgccggatt aaatccggct cttgcctata attctggtcc tatcaatatg cccaatcttt 1861 ctacccctaa tctccaaaat tccggtgctg ctgctgcaca aggtatgcaa tctggtcagt 1921 ctgctgctat tgctgctgcc caaattgata aacttaaatc tgatacttct ttgagtaatg 1981 ctcaagctct aaaggtacag actgatactc gtttgactga tgctcaggct cgttctgctg 2041 aatatcaagc cgatcttaat gactttatgc gcgcaactgg ttcttttaac cttgctcatg 2101 aggatattaa tgctcgtact cttcgcgctc aatatgattc attggaatcc gccaataata 2161 ttgatgcttt gcaacatctt aattcttttg ctcaatcttt aggttttaat aattttaaga 2221 ctgcgcttgg ttctcaagat tttattcaac agcttcagga ctataaagct caagctcaat 2281 ctatgtcttt gcagggtctt aattttcctg aggctcaggc taatgctgct ttttataagt 2341 ctgattttgg taagtctatt gcgccttata tccattcggc gcaaggtatt tcgtctgttg 2401 ggactgattt aatcggtact ggtatcaatc ttttcaaaaa acgtccgttt tttcatttgg 2461 ggaaataatc atgactaaga tatttttgcg tactgcgtac aattttgatg ttgatgcaaa 2521 ttctattgat tttgctcttt ccggttttga accgacttta acggttcagg atgctaagga 2581 cgattgtgat attaatgtta ttatggagcg gtttggtaag ggtataccag ttcctactaa 2641 tcttaaaacg cctatgcagg gcgattttac tggcgttatg gattatcaat cttcacttaa 2701 tttaattatt gaggctgatg aggcatttat gcaacttcct gccgatgttc gttttaggtt 2761 taataatgac cctggtcagt tccttgattt tgtatcggat gatactaata ttgatgaggc 2821 ccgtaaaatg ggccttttga ttcctaaatc gtctcttgag caggatgata atcctgcgaa 2881 aaagggcgat tcggcaagcg atagcgcgcc agtggcgtaa gtttctgaag cctgcacagt 2941 ttcactactt gatgtaactg tgctaggtga caggtttgct ttcctgtctc ctttggagta 3001 atctattcat gtgttgtttt tattgttttt gtggagggtt ttatcatgcg tccaatgtct 3061 cgtcatcatg ttaataaggg tcgatcagcc cgtaaatttc gtaagcatgt atctaagact 3121 aaggctcgta atttaattgg acctatgcgt ggtggtatac gcctttaggt gattttgtgg 3181 cttgttttaa gcctttggat gcctggcaag aggttaactc tcgccaggtg tttttttatg 3241 agcgcaagga ttctaatttt atacaattac cttgtggtca atgtattggt tgtcgcctcg 3301 aacgttctcg tcagtgggct actcgttgcg tccatgagtc tcgcatgcat tctgctaatt 3361 cgtttatcac tttgacttat gctcctgaac attttcccga aaatggctct ctcgactata 3421 aacattttca gcgctttcta aagcgtttgc gtgcccgtgt agggcctatt cgcttttata 3481 tggccggtga gtacggcgaa cagtttttgc gtcctcattt tcacgcctta atatttggtt 3541 atgattttcc tgataaggtt cctcttggta tggtttcttc ggataatatg atttactcct 3601 ctgatctact ttttgatctt tggccttatg gctttagttc tgttggtgag tgtaattttc 3661 aaaccgcggc ttatgtcgcg cgttatgtaa tgaagaagat tactggccga caggcgattc 3721 cgcactatga agttcttaat tatgatacgg gtgagattac tcgccgtgtt cctgagttta 3781 ataaaatgtc tcttaagcct gcgattggtt caacttggtt ggctaagtat ttctctgatg 3841 tttaccccca tgatcgggtt attataaatt ctgttcctac taaacctcct cgcatgtatg 3901 ataagatttt agctcgtgag tttcctgata ttcatgagga tattaaatat cagcgttttg 3961 ttgacagtat ggacaaactg gctgataata ctgatgcgcg ccttgcggtt cgtgaagttt 4021 gttgtaaggc tcgcttatct caacttaaaa ggactttcta aaatggctaa tcaatctttt 4081 gctttcaatg acgaagagtt gggttatctt cgtgctgctc tttctaatca ggttcaagtt 4141 ttccgccgtt ctcgtgctaa gcatgttagt ggttctgcaa tgtttaatgc tcatactgat 4201 gagattaacc gtgttcaatc gattcttact aaggtcggtg gttaatatga atatttacat 4261 tgttcgtgat gttaaggccg gtgcttttaa taatccgttt gtgcagcaat ccgatggtgc 4321 tgctattcgc tcttttcaac aggaagttaa tcgtgtcgat actaataata tgattaatct 4381 gtatcctgct gatttttcgt tatatcgcac tggctcgtat gatcctgatc ttggtgtaat 4441 tagtgcgtta tctcaacccg atcttgttgt tgaagctgtt tcacttgtaa tttcttaact 4501 ttcggccctt cggggccttt tttcttgggg ggttat //