LOCUS MH649164 4165 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctbj013, complete genome. ACCESSION MH649164 VERSION MH649164.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074539 Sequence Read Archive: SRR7122366 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4165) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4165) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (19-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH649164.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 8.75x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4165 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctbj013" /isolation_source="red snapper tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043880; metagenomic" CDS 1..1680 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXQ66350.1" /translation="MPMKNPHKYNTRIGSAQQHQFSEVPHADIQRSTFDRSHGLKTTF NAGELVPIYVDEALPGDTFSCNLTAFSRLATPIHPTMDNAFMDSHFFAVPVRLVWDDF EEFMGETKTYKAAGSDRLDGTPDFTVAAPVPPTITAGGSGEAEQSLSDYFGIPTKVAG LEFSALWHRAYTLVWNDWFRDENLQAPKTLLTTSGADATTYALLNRGKKHDYFTSSLP WPQKGADVTIPLGTTATVFGDGKALGLTDGTNTGGMNSGSSSTGFQLKGNQGNLGQNV GSAAAGASMATEVTYGVVTTGDSGLYADLTDATSATINQLRLAFATQKFLEIQARGGS RYIEVIKNHFNVTSPDARLQRPEYLGGGSSPVNISPVAQTSSTDATTPQGNLSAIGTT VLSGHSFTKSFTEHTIVIGMVSVRTDLTYQQGLNRMFSRETIYDYYWPTLSTIGEQAV KNKEIYAQGSAADETTFGYQERYAEYRYKPSSVTGKFRSNATGTLESWHYAQEYASLP LLGDSWIQVTDSNVQRTLAVASEPQFIFDSLFKLRCTRPMPVNSIPGGTHF" CDS 1680..2234 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXQ66351.1" /translation="MFDWLGGLLGYKATKQTNVASAQMAQKQMDFQERMSNTAVSRRM ADLKKAGINPILAGSKEASSPAGAMAPVLNPTTSALDAGTKKQQMYNLKMQAELMDSQ TAAATSAAQLSSASAAKLQGDIALAMIDRDIYDQPAFKTARAAKLYTDQVAPLVTTAA SAAGAGAIIKKLRPSTAKALRGRL" CDS 2231..2722 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXQ66352.1" /translation="MTIKRKATGVPKNTFRSAYNLGNEDYSETFNDGLTEQYHTDQCD INKILAQFMETGIMPQTKANPQYADVSNVDFQEMQNTLATAKTLFEELPEQVKATFNN EMHSFLNFAENPDNLPQMEEWGLAVKNERLAQALQAEAGEETTSLPAGKSDESDAAEG LST" CDS 2943..3896 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXQ66348.1" /translation="MPCFHPLDGYKSSTGKWISEKTHHLQEELTIPCGKCTGCRTEYS RQWAIRIAHEEQWWKKKDKYSTFITLTYNDKWLPPHNTLIKEDFQKFMKRLRKKKHST KDNPLRFYACGEYGEKNERPHYHAILFNCSFSKDADISNGKNKLYFSQELQDAWSHYD KKTETYEPIGFVSWGEVTFDSAAYVANYVQKKINGKKKDEHYQIENPVCPNTGEYRTH RQQEFSLMSRKPGIASDWLTHYKDDVYPSDYITIKGRKIRPPKAYDKIYERTHKQELE AIKEIRKQEMEKTAHLRTPEALAFQERTHKAKMALYKRNKL" CDS 3893..4156 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXQ66349.1" /translation="MTLCKYTIYDSALEAYHQDYSLENDAIALRQFADMANEETQIAK NPEDYSLWRIGTFETTTGELTPEEPTCLAKAHEHVLQFKKNKK" ORIGIN 1 atgcccatga aaaaccctca caaatacaat acaagaatcg gctcagcgca acaacatcag 61 ttcagcgaag taccacacgc cgatatacaa cgttcaacat ttgataggag tcatgggcta 121 aaaaccacat ttaatgccgg cgaactagta ccaatatacg tagacgaagc attgcccgga 181 gatacatttt catgtaatct cactgcattt agcagattag caacaccaat acatcctact 241 atggacaacg cgttcatgga ctctcatttc tttgccgttc cagttaggct tgtctgggac 301 gatttcgaag aattcatggg agaaacaaaa acatacaaag cagcgggttc cgatagatta 361 gacggaacac ccgactttac agtcgccgca ccagtaccac cgacaattac agcgggtggc 421 agtggagaag cagagcaatc actgtccgat tatttcggaa taccaacaaa agtagcagga 481 ttagaattca gtgcattatg gcaccgagca tatacgctcg tctggaacga ttggttccga 541 gatgaaaacc tgcaagctcc caaaacatta ttaacaacct ctggagcaga cgcaacgacg 601 tatgcgttat taaacagagg aaaaaaacac gattatttta catcatcatt accatggcct 661 caaaaaggcg cagatgtaac aataccatta ggtacaactg caacagtatt tggtgacggt 721 aaagctttag gtctaactga cggcacaaat accggcggaa tgaactcagg ttcaagcagt 781 acaggctttc aattaaaagg taatcaaggt aaccttggtc aaaatgtagg ttcagcagcg 841 gccggtgcaa gtatggctac agaagtaaca tacggtgtag taacaactgg agactctgga 901 ctatatgcag acttaacaga tgcaacatca gcaacaatta accaacttcg attagcattt 961 gcaactcaaa aatttcttga aatacaagcc agaggcggtt caagatatat cgaagtaata 1021 aaaaatcatt ttaacgtaac tagccctgat gctagattac aacgaccaga atatctgggt 1081 ggcggaagct caccggtaaa tattagcccg gtcgctcaaa catcgtcaac tgacgcaaca 1141 acaccgcaag gtaatttatc ggccatagga acaacagtac tcagtggcca ctctttcaca 1201 aagagtttca ctgaacacac aatagtaata ggtatggtat ctgtaagaac agatttaaca 1261 taccaacaag gactgaacag aatgtttagt agagaaacaa tttacgatta ctactggcca 1321 acgctttcaa cgattggcga acaagcagtc aaaaataaag aaatatatgc acaaggaagt 1381 gcagccgacg aaacaacgtt cggctatcaa gagcgttatg cggaatatag atacaagcca 1441 agttcagtaa ctggcaaatt ccgttcaaac gcaacaggaa ccttagaatc atggcattat 1501 gcacaggaat atgcaagcct gccattactt ggtgattcat ggatacaggt aacagactca 1561 aatgtacaac gtacattagc ggtagcaagc gaacctcaat ttatatttga ttcgctattt 1621 aaactaagat gtacaagacc aatgcctgtt aacagcatac ctggaggcac acacttctga 1681 tgttcgactg gctaggagga cttttaggct acaaagctac taagcaaact aatgtagcaa 1741 gtgcccaaat ggcacaaaaa caaatggact ttcaagaaag gatgtccaat acggccgtct 1801 ctcgccgaat ggcagattta aaaaaggccg gaatcaatcc aattttagct ggaagcaaag 1861 aagcaagctc tccagctgga gcaatggctc cagtacttaa cccgactaca tctgctttag 1921 atgcgggtac aaaaaagcaa caaatgtaca acttaaaaat gcaagcagaa ttaatggatt 1981 ctcaaactgc agctgctacc tctgctgccc aattaagttc tgcatccgct gcgaaattac 2041 aaggcgatat agctttagct atgattgacc gagacattta tgaccaacca gcctttaaaa 2101 cagctcgcgc ggctaaatta tatactgacc aagtagcacc actcgtaact acagcggcat 2161 ctgccgccgg agctggtgca attatcaaga aacttagacc atcaacagca aaagcactta 2221 gaggaagact atgacgatta aaagaaaagc cactggcgta ccaaagaaca catttcgttc 2281 agcctataac ctaggcaacg aagattatag tgagacgttt aatgacggtc tcacagaaca 2341 atatcacaca gatcagtgtg atattaacaa aatactagca caattcatgg agacaggaat 2401 tatgccacaa actaaagcaa acccacaata cgcagacgta tctaatgtgg atttccaaga 2461 aatgcaaaat acgctagcaa cagcaaaaac attgtttgaa gaattaccgg aacaagtgaa 2521 ggctactttc aacaatgaaa tgcatagctt tctaaatttt gcagaaaatc ccgataacct 2581 tccacaaatg gaagaatggg gtttagctgt taaaaacgag cgtttagctc aggctttaca 2641 agcagaagct ggggaggaaa caacgtccct cccagcaggc aagtcggatg aatccgacgc 2701 ggcagaagga ttgtctactt gatacaatcc taacgagtga cacctgctag ggtggaacga 2761 gtgaaaaaaa ctagagatta taactacgga gagagataac aatgagaaga cctagaaaaa 2821 tgaactacaa aaaatcaaag agaatgtttt cacgcacagc agcgagaaca cacagaaaaa 2881 actctttaag acacggccga cctatgagag gcggaataag actataaaaa aaaggagcaa 2941 ctatgccatg ctttcaccca ctagacggat ataaatcatc cacaggtaag tggatatccg 3001 aaaaaacaca ccacttacaa gaagaactca caataccgtg cggaaaatgc acgggatgta 3061 gaacagaata ctcgagacaa tgggcaataa gaatagccca cgaggaacaa tggtggaaaa 3121 aaaaagataa atacagtaca tttataacat taacatataa cgataaatgg ctaccaccac 3181 ataacacttt aataaaagaa gactttcaaa aatttatgaa acgtctacgt aagaaaaaac 3241 actcgactaa agataatcca ctccgtttct acgcttgtgg agaatacgga gaaaaaaacg 3301 aaagaccaca ttaccatgca atactattta attgcagctt tagtaaagat gcagatattt 3361 ctaacggaaa aaataagcta tatttttctc aagaactgca agacgcatgg tcacactatg 3421 ataaaaaaac agaaacatac gaacctattg gtttcgtatc atggggagaa gttacttttg 3481 attcagccgc ttacgtagca aattacgtac aaaaaaaaat taacggcaag aaaaaggacg 3541 agcactacca aatagaaaat ccagtatgtc cgaatacagg agaatatcgg acgcacagac 3601 aacaagaatt ttcacttatg agccgaaagc ccggcatagc gagcgattgg ctcacccatt 3661 ataaagatga tgtatatcca tcggattata taacaattaa gggtcgtaaa atacgaccac 3721 ccaaagctta tgataaaatt tacgaacgta cacataagca agaactagaa gcaataaaag 3781 aaatacgtaa acaggaaatg gaaaaaacag cccatttacg tacacccgaa gctcttgcgt 3841 ttcaagagcg tacacacaaa gccaaaatgg ctttatataa aaggaataaa ctatgacact 3901 atgtaaatat acaatatatg attcagcact tgaagcatac caccaagatt acagcttgga 3961 aaatgacgca atagcgttaa gacaattcgc cgatatggcg aatgaagaaa cacaaattgc 4021 caaaaatccg gaggattatt cgctatggcg aatcggcaca tttgaaacta caaccggaga 4081 attaacaccg gaagaaccca cttgtcttgc aaaagcgcat gaacatgtgt tacaattcaa 4141 aaaaaacaaa aaataaggaa ataac //