LOCUS MH617088 4355 bp DNA circular ENV 05-AUG-2018 DEFINITION Microviridae sp. isolate ctca883, complete genome. ACCESSION MH617088 VERSION MH617088.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4355) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4355) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 6.814237x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4355 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctca883" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..1620 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH75073.1" /translation="MLSGHKHSNPSVMVHQFSRVPKAEIPRSTFDRSHAHKTTFDAGW LIPFLVDEALPGDTFNVKLTGLARLATPIFPIMDNMFMDTHYFSVPIRLVWDNWQRFN GEQKNPNDSTDYTIPQMSAPVEGYQPNSLHDYFGIPTKIPSLIHSSLWHRAYNLIYNE WFRDQNLQNSAVVDTGDGPDDPLAYVIRRRGKRHDYFTSSLPWPQKGPGVSIPLGSQA PVIGLLRTTGSEMPLGSEWLDRNGNPAAATSGPTGFTSTATQPFDGVGIAKSGEAMNV YADLTNATAATINSLRQAFQIQKIFERDARGGTRYTELIKSHFGVTSPDARLQRPEYL GGGSSPINVLPIPQTSGTPLNGSTPQGNLAAIGSAVINNHGFTTSFTEHCLIIGLVSV RADLTYQQGLNRMFSRKTRFDFYWPALSHIGEQAVLQKEIYYNPNGDHTLDDRVFGYQ ERYAEYRYKPSMVTGEFRSNFPQPLDSWHLSQHFDTAPVLDESFIIENPPIDRCIAVP SEPHFLFDSFINMKCARPMPVYGVPGLIDHF" CDS 1630..2331 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH75074.1" /translation="MGFSMGDLGAIVGGTSTMGLGTALSMGGQIYATETNKREAAKNR DFQSQMSETAHQREVKDLRLAGLNPILSATHGGASTPSGSVSAPAENPVTPAINSAMS IVRTLAETAKTQAETVTELNRPELINLQGASARAQSNLYTEQANYYADQQEYSQALTD LTKQNKISEQLKQVLLKQDSVIAQQAIAAAKSESKIDNTTYGYLMRLLDRFTKSASPL IPKTSAVLGPRRAPQ" CDS 2436..2972 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH75075.1" /translation="MSYNPKNPRPLIETTNLISNYSTKLRVSLSFPENSPYTKQEFKD ECDINILMNQYMNTGEMPNINERAPQYLDVSGIEFQESMQFVAGAQTLFNELPSILRN RFNNDPSLFLDFVHNPANRQEMAELGLLKPVNEWVNPTPSFTNKTPPDVMSGVSEPNP TTTTSSSSQSQPAPSEKS" CDS 3184..4092 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="AXH75076.1" /translation="MACYSPVTGYLARTPNKNGKRPVVFNRSAGFVDKPLTVPCGQCI GCRIDKSRMWAIRCVHESKLHTSNSFVTLTYDDDKLPLHGSLQKKDLQDFFKRARHIY GNFRYYASGEYGDNTQRPHYHIMFFGIDFSEDRKLYKHNQRSDILYKSDSLNKCWGLG FCTIGSFNYATAAYTARYAIKKVSGKLADEHYSRVDPRTGEFLSVEHEFAIMSRRPGI GSGWYDKFKSDAFPSDFLIYQGKKHSVPRFYTDKLKKEDLSTHKEIKYTRKANQEKNK ANSTPDRLAVREECKKSQIKSLKRSI" CDS 4092..4352 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH75077.1" /translation="MIKYLYSIYDNKAKAFSNPFTSVNDHTAVRDFQRAATDPNSDIC RFPEDYTLFQIASFNDENAVLDYKSQIVNLGIASSFKPILEG" ORIGIN 1 atgctttccg gtcataaaca ctcaaatcca tcggtaatgg ttcatcaatt ttcccgcgtt 61 ccaaaagcgg aaattccacg ctcaactttt gaccgctctc atgctcacaa aactactttt 121 gacgcgggtt ggcttatacc ctttctggta gatgaggctc tacccggtga cactttcaat 181 gtcaagctga cgggcctcgc ccgtctcgca actcctatct ttccaatcat ggataatatg 241 ttcatggata ctcactattt ctctgtccct atccgccttg tgtgggataa ctggcagagg 301 ttcaatggtg aacaaaaaaa tccaaatgac tccactgatt acactattcc gcaaatgtca 361 gctcctgttg aaggttatca acctaacagt cttcatgact atttcgggat acctacaaaa 421 attcctagtc ttatccactc gtctctttgg catcgcgcgt acaaccttat ttataacgaa 481 tggttccgcg atcaaaactt gcaaaactct gctgtcgtcg ataccggtga cggtcctgac 541 gaccctctcg cctatgtaat ccgtcgtcgt ggaaaacgac acgactactt cacttcatca 601 cttccttggc ctcaaaaagg ccctggtgtc tcaattcctc ttggctctca agctccagtt 661 atcggactcc tccggacaac tggctctgaa atgcctcttg gctctgaatg gcttgaccgc 721 aatggaaatc cggctgctgc cacttctggc cctactggct tcacatccac tgctactcaa 781 ccttttgacg gtgtaggcat tgcaaaatct ggtgaggcaa tgaacgttta tgccgacctt 841 acaaatgcaa ctgccgctac tatcaactct ctccgtcaag ctttccaaat acagaaaatc 901 tttgaacgtg acgcccgcgg cggaactcgt tacactgaac tcataaagtc ccatttcggt 961 gtaacttctc ctgacgctcg tcttcagcgt cctgaatatc tcggcggcgg ctcttctcct 1021 attaacgttc ttccgatacc tcaaacttcg gggactcctc tcaatggctc tactcctcaa 1081 ggtaatcttg ctgctattgg ctctgcggtc attaataatc acggattcac tacctcattc 1141 actgagcatt gtcttattat cggtcttgta tctgttcgcg ctgatcttac ttatcagcag 1201 ggactaaacc ggatgttctc tcgtaaaacc cgctttgact tctattggcc agcactttct 1261 cacattggtg agcaagccgt tctccagaag gaaatctatt acaatcctaa tggagatcac 1321 acactcgatg atcgcgtctt cggctatcag gaacgctatg ctgaatatcg ctataagcct 1381 tcaatggtaa ctggtgaatt ccgttctaac tttccgcagc ctcttgactc ttggcatctg 1441 tcccaacatt tcgacactgc ccccgtactc gatgaatcat tcatcatcga aaatcctccc 1501 atagatcgct gcatagcagt accctccgag cctcattttc tatttgatag ctttatcaat 1561 atgaaatgtg ctcgtccaat gcctgtctat ggcgttccgg gtctcataga ccacttttaa 1621 gggggctata tgggtttctc tatgggtgat ctaggtgcaa tcgttggcgg gacttctaca 1681 atgggcctcg gcactgctct tagcatgggc ggccaaatct acgccactga aacaaacaaa 1741 cgcgaagctg caaaaaatcg cgacttccaa agtcaaatgt ctgaaactgc ccaccagcgc 1801 gaagtcaaag accttcgctt agctggtctt aatccaattc tctccgccac tcatggcggt 1861 gcttctactc cttcgggttc tgtttctgct ccagcagaaa atcccgtaac tcctgctatc 1921 aactctgcaa tgtctatcgt tcgtactctt gctgaaactg caaaaactca agctgaaact 1981 gtgactgaac ttaatcggcc cgagctaatc aacctacaag gtgcatcggc acgcgctcag 2041 tcaaatcttt atacagaaca ggctaattac tatgcagatc agcaggagta ctcccaagct 2101 ttgacagact tgacaaagca aaacaaaata tctgagcaac tcaaacaagt tctcttaaaa 2161 caagattctg taattgctca acaggctatt gccgctgcaa aatcagaatc aaaaatcgac 2221 aatacgacct acggctatct tatgaggctt ctggaccgtt tcactaaatc ggcctcgcct 2281 ctaattccaa aaacttctgc cgttctcggt cctcgtcgtg caccacaata aaaaatcact 2341 cgaaaatttt tttcggcccc cttcgggggg ctgaaaaaac attttgagta cctgccggag 2401 gcaatcaaat ctacttaaaa aggagcatcg tctaaatgtc ctacaatcca aaaaatccta 2461 gaccgcttat agaaacaaca aatctaatat caaactactc tacaaaactg cgtgtctctc 2521 taagtttccc tgaaaactct ccatatacaa aacaggaatt taaagacgaa tgcgacatta 2581 acatcttaat gaaccagtat atgaatactg gtgaaatgcc caatataaac gaacgtgctc 2641 cgcaatatct cgatgtctct ggcatcgaat ttcaggagtc aatgcagttc gttgcaggtg 2701 cacaaacact cttcaatgaa ttgccatcaa ttctcagaaa tcgtttcaat aacgaccctt 2761 cgttatttct cgatttcgtc cataatccgg ccaatcgtca agaaatggcc gagcttggct 2821 tacttaagcc agtaaatgag tgggtcaacc cgaccccttc atttacaaat aaaacgccgc 2881 ctgatgtcat gtccggcgtt tcagagccta atccaacaac aactacttcc tcatcttctc 2941 aatctcaacc ggctccatca gaaaaatctt gacgattttt caataaccac ctatagctct 3001 tcttgatgtc tataggtgga gtgacaggat gtcactcaaa aaaacaaaaa aaaagggggt 3061 tccaaatgaa acgtcacaag atgaccaaaa aagcaagtcg ggcaaacttt actcgcggag 3121 cggtatacgt tcataaaaaa aatatgaccg cctccccaat gaggggcggc atcaggcttt 3181 aaaatggcct gctattcccc cgtcactggc tatctagcca gaactcccaa caaaaacggc 3241 aaaagaccgg ttgtcttcaa ccggtcagcc ggttttgttg acaaaccatt aactgtccct 3301 tgtggacaat gtatcgggtg tcgtatcgat aaatcacgaa tgtgggccat tcgctgtgtc 3361 cacgaatcaa aactacatac ttcaaattcc ttcgtcacat taacctatga tgacgacaaa 3421 ctgccattac acggcagtct tcaaaaaaag gatcttcaag acttcttcaa acgtgcgagg 3481 catatctatg gtaacttccg ttattacgct tctggtgagt atggtgataa tactcaacgt 3541 ccccactatc acattatgtt cttcggcatc gacttcagtg aagaccgaaa actctacaaa 3601 cacaatcaac gctccgatat cctttacaaa tccgactccc tcaataaatg ttggggcctc 3661 ggcttctgca cgatcggctc cttcaactat gcaactgctg cttataccgc tagatacgct 3721 atcaaaaaag tgtcgggaaa acttgctgat gagcattact caagggttga ccctcgcaca 3781 ggtgaattcc ttagtgtcga acatgaattc gctatcatgt caagacgtcc cggaataggt 3841 tcaggctggt atgacaaatt caaatcggat gcttttccat ccgatttttt aatatatcaa 3901 ggtaaaaagc attcagtccc tcggttctat accgacaaac tcaaaaagga ggatttatcg 3961 acacataaag aaatcaaata cactcgtaag gctaaccaag aaaaaaataa agcaaacagc 4021 actccagacc ggctcgccgt tcgtgaagag tgcaaaaaat ctcaaatcaa atctctaaaa 4081 aggagcattt aatgatcaag tacctttaca gcatttacga taataaggcc aaagcctttt 4141 ctaatccttt cacctctgtt aatgatcata ctgcggtccg tgactttcaa cgtgccgcta 4201 ctgaccctaa tagcgacatt tgtcgctttc ctgaagatta cacacttttt caaatcgctt 4261 ctttcaatga tgaaaatgcg gtgcttgact ataaatcaca aattgttaat cttggaatag 4321 cttcatcatt caaacctatc ttggaggggt aaact //