LOCUS MH617333 5545 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctce554, complete genome. ACCESSION MH617333 VERSION MH617333.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 5545) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5545) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH617333.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 21.559243x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5545 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctce554" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS 1..2004 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH76213.1" /translation="METTIGGDRLGSGNKQTVSFRNYERSSHDLSYVWRSSMASGPLV PFMSKVALPGDKWEIDLNCEVLTLPTIGPLFGSYKVQLDVFEVPMRLYNAKLHMNKLG VGMDMSKIFLPQISLEAVNRGTSGHSQTFDDNEQINPSSLVKYLGISGLGRYTGAGAV KRDFNAVPYLAYYEIFKNYYSNKQEEIGYIIHSTQSAFDTSQTPTYAMAYSADGTPKG ACLDPTDTLLAEGDKVVIQYPLSAREPQADLVMFVSGVPSDVPASTIFESTRWDEAKS QFECYGFLSTYEGVWKVKAAPAGPVESPKYWFGLLEFPLENIDKMREKILQHSTSDAF KITSTSDYPYKAPMENVVLDSVNYKAVQFSQEGLCLKTYQSDLFNNWINTEWIDGAGG ISELTAVDTSNGDFTIDALNIASKVYDMLNRIAVSGGSYDDWLEAVYTHERVKGVENP VYCGSLIKELAFEEVVSNAMTIDSTADNRKAPLGTLAGRGRLTGKNKGGRIEITVNEP AYIIGLVSITPRVDYSQGNDWDVNLKTFDDFHKPALDGIGFQDLITEQLLWTDTQLNT TTGEVTKNSLGKQPAWVNYMTSVNKTYGGFADANDSMFMTLNRRYEKNSDGTIKDGTT YIDPTKFNNIFAEVSLDSQNFWVQIAANITARRKMSAKIIPNL" CDS 2088..2426 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76210.1" /translation="MYKIPKYEKTSMKLDNTKPGETIEDKVTRLIQNKEPIKDGAPII FTDRAHGVNPAYNIRTDRWEIAVDAMEKVAKMKAAKKEDVAKGPDVDGKVVKGDFGKT ESVHGKTSEN" CDS 2504..3463 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH76211.1" /translation="MATDWLSIGLGATDVIGNQIQAGQQYRRQKKLMDIQQQNQMELN KQGQQIQLETWKETNYPAQMEMLKKAGLNPSLMYAKGGTPGTTGGQGGGSAASGNAQS AAPMEISNIMNMRAQQAQIKLTEAQAEKTKVETEKIGGVDTTKAESEIGKIIAETQNE QIKGELMKVQTAVETIKMNNEQNVIEANLRKIAEETNKLRLENKITQETTDSIIKEAA ANAIGSVLSNELTKSNTKLSQEQIEKIRTELYNDWTRIQQTTKGLEQKDKEIAIQKFR AEFEARWVGTGKVVGKIFKNVVDVLDNMKGATVGTVHSDKVQY" CDS 3467..4549 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH76214.1" /translation="MGCVNSAPLNITTMKQRVIKQIMCLYPKLIRNRKYIPNKKNGGK PPEIKDPRTEFVAVGCGKCMECRRQKTREWQLRLNSEIEDNKNGQFVTLSFSDEAIYE LQEIAKNENPKLEGYELDNKSATIAVRRFLERWRAETGKSVKHWLVTELGSKETERIH LHGIIFTDKPKLITEKWKYGFTYIGEFVNTKTIRYIAKYIHKQDKIHPNYTPVILTSP GIGSNYTKSRWAELNKFKGDKTQEYTYNRAGFRMAIPPYLRNKIYTDEEREQLWINKL DKMERYVNGIKVDVSKNMDEYYKVLEDQQMLNRKLGYGDNTKDWSKIRYEQQQRQLKN MQRITKLKEKENGNTRRIKGKNKKDN" CDS 5282..5542 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76209.1" /translation="MTKKNQMTVVKDDEPKTELIKRTPIEETPFHVIETDGKIFGAFG QYKITENQNSVEEVKEMLSLITWDRIVQISSIILEMLNNKKN" ORIGIN 1 atggaaacaa caattggcgg cgataggtta ggatcgggaa acaaacaaac agtaagtttc 61 agaaactatg aaagaagtag tcacgactta agttatgtgt ggcgaagtag tatggcaagt 121 ggtccattag taccattcat gagtaaagta gcactacccg gtgacaaatg ggaaatagac 181 ctaaattgtg aagtattaac actaccaaca atcggaccac tattcggaag ctataaggta 241 caactagacg tgttcgaagt accaatgaga ttatataatg caaaattgca tatgaacaaa 301 ttaggtgtag ggatggatat gagtaaaata ttcctaccac aaatatcatt agaagcagta 361 aacaggggaa catcagggca ctcacagaca tttgatgata acgaacaaat aaacccaagt 421 agccttgtaa aatacttagg tattagcgga ctaggaagat atacaggagc aggagcagta 481 aaaagagact tcaatgcagt gccgtatctt gcttattatg aaatttttaa gaattattac 541 agtaacaaac aggaagaaat aggatatatt atacatagca cacaaagcgc attcgataca 601 agccaaacac caacgtatgc aatggcatac agcgcagatg gaacacctaa aggtgcatgt 661 ttagacccaa ctgatacact attagcagaa ggtgataaag tagttattca atacccattg 721 agcgcaagag aaccacaggc tgatctagta atgttcgtaa gtggagtacc ttctgatgta 781 ccggcatcaa caatattcga aagtacaaga tgggatgaag caaaatcaca attcgagtgt 841 tatggattcc ttagcacgta tgaaggagta tggaaagtaa aagcagcacc agcaggacca 901 gtagaaagcc caaaatattg gtttggacta ttggaattcc cgttagaaaa tatagacaaa 961 atgcgggaaa agatattaca gcattcaaca agcgacgcat tcaaaatcac aagtacatca 1021 gactacccat ataaggcgcc aatggaaaat gtagtgctag attcagttaa ctataaagca 1081 gtacaattca gccaagaagg attatgttta aaaacatatc aaagtgactt attcaataac 1141 tggattaata cagagtggat agatggagca ggtggaatat cagagctaac agcagtagac 1201 acaagtaatg gtgatttcac tattgatgca cttaacatag ctagtaaagt gtatgacatg 1261 ttaaacagga ttgcagtaag tggtggaagt tatgatgact ggttagaagc agtatataca 1321 catgaaagag ttaaaggagt agaaaaccct gtatattgtg gaagtttgat aaaagaactt 1381 gcattcgaag aagtagtaag taatgcaatg acaatagaca gcacagcaga taatagaaaa 1441 gcacccttag gaacactagc aggacgtggt agattgacag gtaaaaacaa aggtggtaga 1501 atagaaataa cagtaaacga accggcatat ataatcggat tagtaagtat aacgccacga 1561 gttgattaca gtcagggcaa cgactgggat gtaaacctta aaacatttga cgacttccat 1621 aaaccggcat tggacggaat aggtttccaa gacttaataa cagaacagtt actatggact 1681 gatacacaac taaatacaac aacaggagaa gtaacaaaaa atagtttagg aaaacaaccg 1741 gcatgggtaa actatatgac atcagtaaat aaaacatatg ggggattcgc agatgcaaat 1801 gatagtatgt ttatgacact aaataggaga tatgaaaaga attcagacgg aacaattaaa 1861 gacggaacta catacataga cccgacaaag ttcaataaca tatttgcaga agtaagttta 1921 gatagccaaa acttttgggt gcagatagca gcaaatataa cagcaagaag aaaaatgagt 1981 gcaaaaataa ttcctaattt ataaaccaat aacgggggaa aagcgagtaa agaacagtaa 2041 taatgttata ggctgaccta gtaccccatt attataaaac taaagccatg tataaaatac 2101 caaagtatga gaaaactagt atgaagctag ataatacaaa accgggtgaa acaatagaag 2161 acaaagtaac aagacttata caaaacaaag agccaataaa agacggcgca ccaataatat 2221 ttacagacag agctcatgga gtaaacccgg catataacat aaggaccgat agatgggaga 2281 tagcagttga tgcaatggaa aaggtagcaa aaatgaaagc agccaaaaaa gaagacgtag 2341 caaaaggtcc ggatgtagat ggaaaagtag taaaaggaga tttcggtaaa accgagtcag 2401 tacatggtaa aactagtgaa aactagtaat gaaaaacaag cattacgcat gtactcctaa 2461 tagatctagt atatagtata acaattttaa aaaaatcgcg aaaatggcaa cagactggtt 2521 atcaatagga ttaggagcaa ccgatgtaat cggtaaccaa atccaagcag gacagcaata 2581 cagaaggcaa aaaaagctaa tggatataca acaacagaac caaatggaat taaacaagca 2641 agggcagcag atacagctag aaacatggaa ggaaacaaac tacccagcac agatggagat 2701 gttaaaaaaa gcagggttaa accctagcct aatgtatgca aaaggtggaa cgccaggcac 2761 aaccggggga caaggtggcg gaagcgcagc aagtggaaat gcacaaagcg cagcacctat 2821 ggaaatatca aatataatga acatgagagc tcaacaggct caaataaagc taacagaagc 2881 acaggcagaa aaaacaaaag tagaaacaga gaaaataggt ggagtagata caactaaagc 2941 agaaagtgaa attggtaaga taatagcaga aactcaaaac gaacaaatca aaggtgagct 3001 aatgaaagtt caaacagcag tagaaacaat aaaaatgaac aatgaacaaa atgtaataga 3061 agcaaacctg agaaaaatag cagaagaaac aaataaatta agactagaaa acaaaataac 3121 acaagaaaca acagatagta taataaaaga agccgctgca aacgcaatag gaagcgtttt 3181 aagcaacgaa ctcactaaat cgaataccaa actatcacag gaacaaattg agaagattag 3241 aaccgagctt tacaacgact ggacaagaat acaacagaca acaaaaggac ttgaacagaa 3301 agataaagaa atagcaatac agaaattcag agcagaattc gaagctagat gggtaggaac 3361 aggtaaagta gtaggtaaaa tattcaaaaa cgtggtagat gtgctagaca acatgaaagg 3421 tgcaacagtg ggaacagtgc acagcgataa agtgcaatat taaaaaatgg ggtgcgttaa 3481 cagcgcaccc ctaaatataa caactatgaa acaacgtgta ataaaacaaa ttatgtgttt 3541 atacccgaaa ctaatacgca acaggaagta tataccaaat aagaaaaacg gcggaaaacc 3601 gccagaaata aaagacccac gaacagaatt cgtggcagta ggatgtggaa agtgtatgga 3661 gtgcagaaga cagaaaacaa gagaatggca actaagatta aacagtgaaa tagaagacaa 3721 caaaaatgga caattcgtaa cactatcatt tagtgatgaa gcaatatacg aactacaaga 3781 aatagcaaaa aatgaaaacc caaaattaga aggatatgaa ttagataata aatcagcaac 3841 aatagcagtt agaagattcc tagaaagatg gagagcagaa acaggtaaat cagtaaaaca 3901 ctggttagta acagaacttg gaagcaagga aacagagaga atacatttgc acggaataat 3961 attcacagat aaaccaaaac taataaccga gaaatggaaa tacggattca catatatagg 4021 tgaattcgta aacacaaaaa caataaggta catagcaaaa tacatacata agcaagataa 4081 gatacacccg aactatacac cagtaatact aactagtccc ggaataggaa gcaactatac 4141 aaaaagcaga tgggcagaac ttaacaaatt caaaggagat aaaacacaag aatacacata 4201 caatagagca ggattcagga tggcgatacc gccatactta agaaataaaa tatatacaga 4261 tgaagaaaga gaacaactgt ggataaacaa attagataaa atggaaagat atgttaacgg 4321 aataaaagta gatgtaagca aaaacatgga tgaatactat aaagtgctag aagatcaaca 4381 gatgttaaat agaaaactag gatatggaga caacacaaaa gactggagta aaataagata 4441 tgaacaacaa cagagacaat taaaaaacat gcaaagaata acaaaactaa aagaaaaaga 4501 aaatggaaac actagaagaa ttaaaggaaa aaataagaaa gacaattaat acaataatat 4561 ggataattat aatagcgacg ataatatcgt taatattctc ctgcaaaaca tcggaaagaa 4621 gtttgacgat tacaaaggag atcaaataca aaagagtgaa gaattgaaac ccattgttat 4681 taggggtgag ctcaattatg agacaggaga aataaaagtt aaggacgcag tacaggggac 4741 aatttgggaa aactaatggt gttagtcact acctcccggt atggaaaaat acaaggatta 4801 acccaaatgt taaataatgt taaaagatgt taaataatta ggatatatgg tgcacataac 4861 gtacctttac agtacattaa ataactaaaa acataaagac atgggaagat tgaaaacaaa 4921 caccaaaaga attatcttaa cacaagacga aagaacacta atttattaca tgttaagaat 4981 gatacagaac gacttagaag acactcaaaa atcaggtgta acaaaaaaat atcacgtaaa 5041 tacaactatt gttattaaag atgaagatat taacattatg aatgaattaa taaataaaat 5101 ataaaacatg ttatacaaca taaaataatc ataatggaaa taataatttg gtgcagcgac 5161 tgcaaagaga aaacccccca tacgggggaa ctaaaaacat tcaacgatag ttgcacatat 5221 acatggactt gcaacaaatg tgaccttaga aatagtacta aacaattaat caaaaaaaac 5281 aatgacaaag aaaaatcaaa tgacagtagt aaaagatgat gagcctaaaa cagagctcat 5341 aaaacgaaca ccaatagaag aaacgccatt ccacgtaata gaaacagatg gcaaaatatt 5401 cggggcattc ggacagtata aaataactga aaaccaaaat tcagttgaag aagtaaaaga 5461 aatgctatca ctaataacat gggatagaat agtacaaata tcatcaataa tccttgaaat 5521 gttaaacaac aaaaaaaact aaaac //