LOCUS MH617568 4173 bp DNA circular ENV 05-AUG-2018 DEFINITION Microviridae sp. isolate ctce955, complete genome. ACCESSION MH617568 VERSION MH617568.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4173) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4173) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United States of America COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 15.878505x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4173 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctce955" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..258 /inference="similar to AA sequence:UniProtKB:D8TU18_VOLCA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH77294.1" /translation="MWASWPAWASPGRFCAPLRPLGASRASDGPPRPSWASSGASAPL CAPWARPGPLTALPCALLRACCSPVFGSMLPLGSVAPLVLN" CDS 368..727 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH77295.1" /translation="MAPVMPGGRGPRPRICSGCRRARRTVRLGQVVGGASLLSPLPAI GLHPCHAQTPMTRGPPLLARGHVVQLPPLVSPIPARSPSRLAAASVSAAAWIALATGR CAAFMKRIPMMRFPSSR" CDS 511..1425 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="AXH77300.1" /translation="MPCTNPYDAWPAAPGARSRRPVASPGQSYPGAVAFQIGCGQCLG CRLDRAGDWALRCVHEAHSHDAVSFVTLTYSEEFLPRDGSISKRAHQLFMKRLRKLLG RKLRFLMCGEYGEQLGRPHYHYVIFGEAFRADRVPHSRSGSGELLYASEMLSKAWPYG LALLSDFTHATAGYVARYTTKKITGKAAADYYRRDLIDPETGELRTVDLLPPFLAASS KPGLGSDWFAEFKSDALPSDFLILDGHKRRVPPFYVKRLSEPEREALKRQRRERGREH ADNNTPERLDVRHESQFLRAQRLSRDLA" CDS 1429..1782 /inference="similar to AA sequence:UniProtKB:D3B066_POLPA" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH77296.1" /translation="MARDLLSLLEPAAPSPLLTAAPPPKPRDLFAWPDPAAPDYFDQV LARGWRLIERFRVHTDCALMRSDRWPSAEDFVRDRNCVCDQCHWRAIAFRDGTPDARG EAARLLRNRIRRYAT" CDS complement(1616..1975) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH77299.1" /translation="MRSRPQRGASSTNCTRLDGPQDLRASACMRRASACIRATSPRSS PWRRASRPSFESSFCRWDDSLTSRISECDCEGAARPRRGHLACRHERQSRASGTGHRH SCDRGRNPQPRASDRSA" CDS 2468..3052 /inference="similar to AA sequence:UniProtKB:I4DCV1_DESAJ" /note="Firmicute plasmid replication protein (RepL)" /codon_start=1 /transl_table=11 /product="RepL" /protein_id="AXH77297.1" /translation="MRAPTVVRLVPKRERVERDVAEQAASAIMSLPAHVVPPFVLQTV LNALSRVTSPDTDKGLWPGGFVMLSQRQIGAIWDAIRALPGREYPGRVRHVFDLVLLN LRPDTGEVMLLRDQLAERVGCDPHSVTKAMGVLKRLGVIETERRKVDGMRGPGVVAYF INPHAAWNGDLSLRREAADRQPPPLLHLMEGGKS" CDS complement(2645..3370) /inference="protein motif:CDD:235401" /note="translation initiation factor IF-2; Validated" /codon_start=1 /transl_table=11 /product="translation initiation factor IF-2" /protein_id="AXH77301.1" /translation="MPAWLETRKRTVPPSGGTRSGRRPQEEAQGHRKQPERLHQRRRE TTHRERAHCAQPRGGTPPPPLPRGRHSDREARQRSPPDRPPKKRGDEGAAPARRGRAW HRSGSRFAAFHQMQKGRRLAVSSFPPQRQVAIPGSMRVDEVGDDARTAHAIDLAALSL DHAEALKNAHGLSDRVGIAPDTLRKLVPQEHHFARIGAKVEQDQIEHVPDAAGIFAPR QSADCVPNRADLTLRQHHEASRP" CDS 3501..3779 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH77298.1" /translation="MRCLCPHPALPPRRVPSRRLWLASVRAGLPSAALSALPARLGPS CVLAPSLRLRRGGSRTALRASLRERRGGVPLPSSLLASLCALRSRFRL" ORIGIN 1 atgtgggcaa gctggcccgc ctgggcctcc cctgggcgct tctgcgcccc tctgcgcccc 61 ctgggcgcgt ccagggcctc tgacggccct cctcggccct cctgggcctc ctctggcgct 121 tctgcgcccc tctgcgcccc ctgggcgcgt ccagggcctc tgacggccct cccctgcgcg 181 cttttgcgcg cttgctgctc gcccgttttc gggtcgatgc tgcccctcgg atcagttgct 241 ccccttgttc tcaactgatc cacgtgacac caaacggtgt ctaaaccccc ccaagaaact 301 tgcgcggccg atctcggctg tgcagattct ccaacacaag cccggccgct tcggctcggg 361 cgtctgcatg gctccggtga tgccgggcgg gagagggcct agaccgcgta tctgttccgg 421 ctgccgaagg gcgcgacgga cagtgaggct cggtcaggtc gttggaggcg caagcctctt 481 gtctcccctt cctgccatcg ggctccaccc atgccatgca caaaccccta tgacgcgtgg 541 cccgccgctc ctggcgcgcg gtcacgtcgt ccagttgcct cccctggtca gtcctatccc 601 ggcgcggtcg ccttccagat tggctgcggc cagtgtctcg gctgccgcct ggatcgcgct 661 ggcgactggg cgctgcgctg cgttcatgaa gcgcattccc atgatgcggt ttccttcgtc 721 acgctgacct actcggagga atttctcccg cgtgatggct ctatctcaaa gcgggcgcat 781 caactgttca tgaagcggct gcgtaagctg ctcgggcgca agctgcgctt cctcatgtgc 841 ggcgagtatg gcgaacaact cggccgccct cactaccact acgtcatctt cggggaagcc 901 ttcagggctg accgcgttcc gcactcgcgc tctggctccg gcgagctgct ctacgcttcg 961 gagatgctgt ctaaagcgtg gccctatggc ctcgcgcttc tgagcgattt cacccacgcg 1021 acggcgggct acgtcgctcg ctacacaacc aagaaaatca cgggcaaagc ggcggcggac 1081 tattaccgcc gcgacctgat tgaccctgag accggcgagc ttcgcacggt cgatctactg 1141 ccccccttcc tggctgcatc cagcaagccg ggcctcggct ctgactggtt cgcggagttc 1201 aagtctgacg ctctcccctc cgacttcctg attctcgacg gccacaagcg gcgcgtgccg 1261 cccttctacg tcaaacggct ctctgagcct gagcgggaag ctctcaagcg tcagcgtcgg 1321 gaacgcggcc gcgaacatgc ggacaacaac actcctgaac ggctcgacgt tcgccatgag 1381 tcgcagttcc tgcgcgctca acgcctctcg cgggatcttg cctgacccat ggcccgcgat 1441 ctgctctccc tcctcgaacc ggccgcgccg tctcccctac tgacggccgc gcctcctcct 1501 aagccacgcg atcttttcgc gtggcccgac cctgccgcgc ctgactactt tgaccaggtg 1561 cttgcgcgcg gctggcgtct cattgagcgc tttcgcgtcc atacggactg cgccctcatg 1621 cgctccgatc gctggccctc ggctgaggat ttcgtccgcg atcgcaactg tgtctgtgac 1681 cagtgccact ggcgcgcgat tgcctttcgt gacggcacgc cagatgcccg cggcgaggcc 1741 gcgcggctcc ttcgcaatcg cattcggaga tacgcgacgt gagtgaatcg tcccacctgc 1801 aaaagctgct ctcaaagctc ggccgcgaag ctcgacgcca tgggctagag cgtggcgagg 1861 tcgcccgtat gcaagccgat gcgcggcgca tgcacgccga tgccctcaag tcctgcgggc 1921 cgtccagccg tgtgcaattc gtgctggaag ctcccctctg cggtcggctt cgcatggcgt 1981 gcgtcgtgac tgacgacttg cctctgacga tccactgatg cgcgcgctag ccgccttcgt 2041 ctttcacctg gctgtcgtcg ttaccggcgt cgcctggatc ggcgctgtcg tcgttaccgt 2101 cgccgcctct ctgctgttcg gcctctcggg ccggtagctc cttggccatg cctggggtgc 2161 ccgcttcgcc tggcgccctc gcattaagcc tctctttcgc gcttccttcg gcgcgttgct 2221 cccctgctgt gcggggtgct tcatcctctt ttcccctgcc ccctctcgcc ggtgatttat 2281 ccccgaaaaa gaggggggac ttaaaagggg gaagaataga aattcttaag aagttcttag 2341 ggctgcgccc tatcccgcga ttttctgcgg caaaccggcc gcattaggtg gttgcctgta 2401 accaaccaaa ggggttacac atgaccacct aatcgcaagt tatccacaac ctcgggaggc 2461 tcccgcaatg cgcgccccta ctgtcgttcg gctggtgcca aaacgtgagc gcgtagagcg 2521 cgacgttgcc gaacaagccg cctcggccat catgtcgctc ccggcgcatg tcgtgccgcc 2581 tttcgtcctt caaacagtgc tcaatgcgct gtctcgtgtt acctcgcccg ataccgacaa 2641 gggcctatgg ccgggaggct tcgtgatgct gtctcaacgt caaatcggcg cgatttggga 2701 cgcaatccgc gctctgcctg ggcgcgaata tcccggccgc gtccggcacg tgttcgatct 2761 ggtcttgctc aaccttcgcc ccgatacggg cgaagtgatg ctcttgcggg accagcttgc 2821 ggagcgtgtc gggtgcgatc cccactcggt cactaaggcc atgggcgttc ttaagcgcct 2881 cggcgtgatc gagactgagc gccgcaaggt cgatggcatg cgcggtcctg gcgtcgtcgc 2941 ctacttcatc aacccgcatg ctgcctggaa tggcgacctg tctctgcggc gggaagctgc 3001 tgaccgccag ccgcctcccc ttctgcatct gatggaaggc ggcaaatcgt gatccgcttc 3061 tatgccaagc tcgcccgcgc ctcgcaggcg ctgcgccttc atcgcctctc tttttgggcg 3121 gcctatcggg cgggcttctt tgcctcgcct ccctatcgct atgcctccct cgcggaagcg 3181 ggggaggcgg cgttcctcct cggggttgcg cgcaatgcgc gcgttctcga tgcgtcgtct 3241 cgcgacgtct ctgatgcagc ctttcgggct gctttctatg cccctgggct tcctcctgtg 3301 gcctccggcc ggagcgtgtg cccccgctag ggggaaccgt tctttttctc gtctccaacc 3361 atgccggcat tctcgccggc cctctccatc cccgtgcggc caggggccgc gcggggatgg 3421 aggaggaccc ccgcgcgcga agcgcggggg tccggaggaa ggggcggcta gccccttcct 3481 ctcgcgcgta gcgcgttctg atgcggtgtc tttgcccgca tcctgctctc cctcctcgcc 3541 gggttccctc ccggcgtctc tggctcgcct ctgtgcgtgc tgggctgccc tcggcggccc 3601 tctccgcgct tccggcgcgg ctggggccta gctgtgttct ggctccctct ctgcgcctcc 3661 ggcgcggcgg gtcccgaacc gcccttcgcg cctctctgcg cgagcggcgc ggcggggtcc 3721 cgcttccatc tagcctactg gcttccctct gcgctctgcg ctcaaggttc cggctctgag 3781 ttcccaactt atattaatct aaacaacgtc ttgcctgcta taaagtgcca caaataaacg 3841 aaacaataat tactaacccc taaacaaata tcactgaaac gatactaaaa ctgcactata 3901 gcggcctcaa ccttagttct ttcctttcat ctctcaatat taccaatcac attaccgaac 3961 ctctcttttc tgttcttctt ctttctctcc tgacccggcg gttgtcccgc cgtcattgcc 4021 gctttgcggc tcccccacga taggcgttgc cttcacctgg ctgccgcctg gttgccattc 4081 tgcctatcgt gctttggccc ttctgggcct ccctaggctt gtccacatat ccacgggcgt 4141 agcgggcacc catggcccgc gtagccggtg ggt //