LOCUS MH617293 4770 bp DNA circular ENV 05-AUG-2018 DEFINITION Microviridae sp. isolate ctcf663, complete genome. ACCESSION MH617293 VERSION MH617293.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4770) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4770) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United States of America COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 4.533543x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4770 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctcf663" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..1608 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH76015.1" /translation="MKSVMRHQFSQVPRAEIPRSSFDRSHGLKTTFNAGDLIPIFVDE ALPGDTFSLRCTTFARMATPLHPIMDNLFSEIFFFAVPYRLVWTHFVNFFGEQANPGD STSFLVPQFTAHKPVSGSLADYFGIPIDGTAPVLAGNITFNSLHHRAYNKIYNEWFRD QNLQNSVTVDMGDGPDNVANYVVLKRGKRHDYFTSALPWPQKGTAVSIPLGTSAPVKT GATQVTGAQNNVKFTNTSGAAISAAVALGLDNTGTLAGWTAAGTAGAPFVYPNNLYAD LSTATAATINSLRQAFQIQKIYERDARGGTRYTELIQSHFGVTSPDARLQRSEYLGGG HTAINVNPIAQTGGTGASGTTTPQGNLAAMATFSHSGAGFTKSFTEHCLLIGLINVRA DLNYQQGMNKMFSRQTRFDFYWPALAHIGEQAVLNQEIYMVGTPAQDTAVFGYQERYA EYRYKPSTVTASFRSTFATTLDSWHLSQSFSALPVLNGAFIQDNPPIARVVATPTTAN FICDVYFSLRCARPMPVYGVPGNIDRF" CDS 1618..2484 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH76016.1" /translation="MFPLISGLVTGGASLLGSIFSANQSANNVQANIEAQWANQAAAQ TFNHDEATLSREFARDQSREQMGFQNAQLEQQRAYETQMSNTAYQRSRADMQAAGLNP ILAAGAGGASTPSTGFGTGSAPTGGQASITAAPSGLHNARSPLEGLGEAASRAVSSAV SVKTMDKMAEEIANLNAENAKIRADVDLSRAHGSESTMRTRIGDLERQLKELHIEPEK VTQSTAKNILEMDEDVKKGIDQGKYQDKHIGGVVGGVVGAARASAKAAKDWYDSQPSF SDRFNEVYGNSN" CDS 2500..2988 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH76017.1" /translation="MSKSNFPVATHDFLKSNGLRYADTCTFVEGPSLTRQEFAEECDI NSLMARYDTHVIGGPGNLPPAQPIYFDFADAPQTLMEYMQFQKDAEEQFMRLPAVVRK EFDNSALEFVAFATDPGNVDQMVSWGLAAPKPKPQEAPPAAVASSPAPAAAPPPEGSK AP" CDS 2720..3010 /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76013.1" /translation="MLLRRLWSICSFRRMRRSSLCVSPLLCVRSLIILRLSLLPLLLI PGMWIRWFLGGSRRLSRSPRRRRRPLLLPLQPRRLPPLQRALKPRDSTFHLM" CDS complement(3124..3369) /note="No HHBLITS hits" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76014.1" /translation="MRLRPTLRLMNTTHTPLFSFTHTTTNTLATRHAKRNLSSGLILI KSNGVPRNGTPIRLLRVDTTHRRIPPRIGNRVGIFLR" CDS 3304..4107 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="AXH76018.1" /translation="MSKAEQWGMRCVHEAKCWPQSHFVTLTYNDEFMPPGGSLCLRDV QLFMKRLRFEYKSTSASPIRFFLGGEYGDENRRPHYHALLFNLSLDDRMYYATNKRGE KLFTSARLAACWGKGFVTIGAVTLDSAIYCAKYALKALNVTDDSPPEVRRRYEERYVV YDADGVVTERCREFAVMSRRPGIGGYYYEKYGAEVRAHDSVVVNGKERSPPRYYDSKF DAVDADGFARMKRKRKRLAVLAKSDNTPERLRVKERLMVIAAELKERKL" CDS 4104..4373 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH76019.1" /translation="MKLLVFTVYDSAVSAYLQPFFARTSGEAIRSFSDACREGPFAQH PMDFTLMLLGEYDDAGAMFATQAPVRVASATEFSTKMLDAAKGSA" ORIGIN 1 atgaagtctg ttatgcgcca tcagttttcg caagtgccgc gtgctgagat tccgcgttcg 61 tcgttcgatc ggtcgcatgg tttgaagact acgtttaatg ctggcgactt gatccctata 121 tttgtggacg aggctttgcc gggtgacacg tttagtttgc gttgtacgac gtttgcgcgt 181 atggcgactc cgttacatcc gattatggat aatttgtttt cggagatatt tttctttgcg 241 gtgccgtatc gtcttgtctg gactcatttc gtgaattttt tcggtgagca ggctaatccc 301 ggtgatagta cttcatttct ggtaccgcag ttcactgctc ataagcctgt gtctggttct 361 ctcgctgatt attttggtat tcctattgac ggtactgccc cagttctcgc tggtaatatt 421 acgttcaatt ctttgcacca tcgcgcgtat aataagattt ataatgagtg gtttcgtgat 481 cagaatttgc agaattctgt tactgttgat atgggtgacg gccctgataa cgttgctaac 541 tacgttgttt tgaagcgtgg caagcgtcat gattatttta cgtcggccct gccttggccg 601 cagaaaggca cggccgtatc gatccccctg ggtacctctg ccccggtgaa gaccggtgct 661 actcaagtta ctggtgctca gaataatgtg aagtttacta atactagtgg tgctgcgatt 721 tcggctgcgg ttgcgcttgg tcttgataat actggtactc ttgccggttg gactgctgct 781 ggtactgccg gtgcgccgtt cgtgtatcct aataaccttt atgctgatct gtcgacggct 841 acagcggcta cgattaactc gcttcgtcag gctttccaga ttcagaagat ttatgaaagg 901 gatgctcgcg gtggcacgcg ttatacggag ctcatccagt ctcacttcgg tgtcacttct 961 ccagatgcgc gtctacagcg ttcggagtat cttggtggtg gccatactgc tatcaatgtc 1021 aaccctattg cgcagactgg tggaacgggc gctagtggta ccactactcc gcagggtaat 1081 ttggcagcta tggctacctt cagtcattcg ggagcgggct ttacgaagtc gtttacggag 1141 cattgtctct tgatcggttt gattaatgtg cgtgctgatt tgaattatca gcaaggcatg 1201 aataagatgt tttctcgtca gactcgtttt gatttctatt ggcctgcttt ggctcatatt 1261 ggtgagcagg ccgttcttaa tcaggaaatt tatatggttg gtactcctgc gcaggatact 1321 gctgtgtttg ggtatcagga acggtatgct gagtataggt acaagccgtc tacggttact 1381 gcgtcgttcc gttctacgtt tgccactaca cttgatagtt ggcatctgtc tcagtctttt 1441 tcggctctgc ctgttctgaa tggtgcgttc attcaggata atccgcctat tgctcgtgtg 1501 gttgcgactc cgactacggc taactttatc tgtgacgtgt attttagcct gcgttgtgct 1561 cgtcccatgc cggtctacgg cgttcccggt aatatcgatc ggttctagga ggtttttatg 1621 tttccgctta tttctggtct tgtcactgga ggtgcttccc ttttgggaag cattttctct 1681 gctaatcagt ctgctaataa tgtgcaggct aatattgaag cgcagtgggc taatcaagcc 1741 gctgcgcaga cgtttaatca cgatgaggct actttgagcc gtgagttcgc tcgggatcag 1801 tctcgtgagc agatgggttt tcagaatgct cagttggaac agcaacgtgc ctatgaaacc 1861 cagatgtcga acacggcgta tcagcgttct cgcgcggata tgcaagctgc tggccttaat 1921 cctatccttg ccgctggtgc tggtggcgct tctacaccct ctacaggttt tggtactggt 1981 tctgccccta ctggtggtca ggctagtatt actgccgcgc cgtcgggttt acataatgcc 2041 cggtcgccgc ttgagggact cggcgaggcc gcgagccgtg cggttagctc ggcggtttcg 2101 gtgaaaacga tggataagat ggcggaggag attgccaatc tcaacgctga gaatgctaag 2161 attcgcgcgg atgtcgattt gtctcgcgct catggttctg agtctactat gcgtacgcgt 2221 atcggtgatt tagagcgtca gttgaaagag ttgcatattg agcccgagaa ggtgactcag 2281 agtactgcta agaatatcct tgaaatggat gaggatgtga agaaaggtat tgatcagggt 2341 aagtatcaag ataagcacat tggtggtgtt gttggtggtg ttgtcggcgc ggcgagagct 2401 agcgctaagg cggctaagga ttggtatgac tctcagccgt cgttttctga tcggtttaat 2461 gaagtgtatg gtaactctaa ctaggatgga gaagatggta tgtctaagtc gaattttccg 2521 gtggcaactc atgacttcct caagtctaac ggtttgcgat atgcggatac ttgcactttc 2581 gttgagggac cctcgctcac gcggcaagag tttgccgagg agtgtgatat caattcgttg 2641 atggctcgct atgatacgca tgtgattgga ggtccgggta atcttcctcc ggctcagccg 2701 atctattttg attttgcgga tgctcctcag acgcttatgg agtatatgca gtttcagaag 2761 gatgcggagg agcagtttat gcgtctcccc gctgttgtgc gtaaggagtt tgataattct 2821 gcgcttgagt ttgttgcctt tgctactgat cccgggaatg tggatcagat ggtttcttgg 2881 gggctcgcgg cgcctaagcc gaagccccag gaggcgccgc cggccgctgt tgcttcctct 2941 ccagccccgg cggctgcccc ccctccagag ggctctaaag ccccgtgaca gtacgttcca 3001 cttgatgtag tactgttgac tgacagaatg tcagtctctc acaggaaagg gttccgcgat 3061 gcgtcgtcat aagatgtctg gtcatggttc taagcggttg tttagtaaga ccgcgagtca 3121 tactcaccgt aagaatatgc ctactcgatt gccgatgcgc ggtggtattc gtctgtgagt 3181 tgtgtccacc ctaagaaggc gtattggcgt tccgttgcgc gggacgccat tacttttgat 3241 aagaataagt ccgctactaa ggtttcgttt agcgtgccgt gtggcaagtg tattggttgt 3301 cgtatgagta aagctgaaca gtggggtatg cgttgtgttc atgaggcgaa gtgttggcct 3361 cagtcgcatt ttgttacgtt gacgtataat gatgaattta tgcctccggg tggttcactt 3421 tgtttgcgtg atgtacagtt gtttatgaag cgcttgcgct ttgagtataa gtctactagt 3481 gctagtccta ttcggttttt tcttggcgga gagtatggtg atgagaatcg tcgtccgcac 3541 tatcacgctc ttttgtttaa tctttccctc gatgatagga tgtactacgc tacgaataag 3601 cgaggggaaa agttatttac atctgcgcgt ctcgccgctt gctggggtaa aggtttcgtc 3661 acgattggtg ccgtgacgct tgattccgcg atttattgtg ctaagtatgc gttgaaggcg 3721 ttgaatgtta cggatgattc tcctccggag gttcgtcgtc gttacgagga aaggtatgtt 3781 gtttatgatg ccgatggtgt cgttactgag cgatgtcgtg aatttgctgt tatgtctcgt 3841 cgtcctggta tcggtggtta ttactatgag aagtatggag cggaagtgcg tgcgcacgac 3901 agtgttgtcg ttaatggcaa ggagcgttcg ccccctcgat attatgattc taagtttgat 3961 gctgttgatg ctgatgggtt tgcccgcatg aagcgtaagc gtaagcgtct tgctgtgctg 4021 gcgaagtccg ataacacgcc ggagagattg cgtgtgaaag agcggttaat ggtgatcgct 4081 gctgagctga aagagaggaa gttatgaagt tacttgtttt tacggtgtat gattcggctg 4141 tgagtgctta tcttcagccg ttttttgctc gaactagtgg tgaggcaatt cgttcgtttt 4201 cggatgcttg tcgtgaaggt ccgtttgctc aacatccgat ggactttact ttgatgttgc 4261 tcggcgagta tgatgacgcc ggagctatgt ttgctactca ggctcctgtt cgtgtagcgt 4321 ctgctactga gttttcgact aagatgttgg atgccgctaa gggttccgcg taagcggtag 4381 aggcgggagc cacccaggtg gctcccgccg gtttttttat ttgtcttttg tgtttgtcac 4441 ttttagtttg actgcttcta attcgttttg aatttgtttg tatacgggta ttagcattgg 4501 atttttggaa ctgttttgtg cgcgtttctg gctcgcgata gcttgctcaa gagcgcctac 4561 tattagttcc ttttctgcgt atgtgaacat ttttaccgtt actccttttg tgcgtaattg 4621 cactgttagt ttgtatagta ttgtgtttgt tctgtcaagc cggagcggca ggacgttgtt 4681 gcgtcatatt ccggtgtcgc cagcgaggct tgatcagcct cgttataatt atcctagaac 4741 agcggccggt acggccgatg ggagaccact //