LOCUS MH616826 4167 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctcf73, complete genome. ACCESSION MH616826 VERSION MH616826.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN07319269 Sequence Read Archive: SRR5832142 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4167) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4167) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH616826.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 23.0552x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4167 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctcf73" /isolation_source="haddock tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX3009445; metagenomic" CDS 1..1566 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH73898.1" /translation="MSIFDKIQLTRPGSSSFNLSHDRKFSLNMGKITPILCQEIVPGD KFNVTTQQMLRFAPMLSPVMHEVNVFTHFFFVPNRLIFDDWEKFITGGESGTDQTLFP TITNLNVQIRELGDYLGLPTSSFGSEKISRLPFNAYNLIFNEFYRDQNLIDELPINKA GGNIDRNALSSEERATFSLLQNRAWQHDYFTSALPWAQKGNPVKLPIGTTAEIYYDMN NRVADQLIRDAGAPHDVLIPPHDQYLENRGGSLQQELSGEVSKKVHLDLQGTHKVDLT DAVSATINDLRKAFKLQEWLEKNARAGSRYVESLLAHFGVKSSDARLQRPEFLGGGMS PVMISETLQTSQTQDTPLGEMAGHGLNLGKSHSFNRFFEEHGFVIGVMSVMPKTAYQQ GIPKAFSKFDKFQYFWPEFQHIGEQEILQKELKFDPLNKDEIFGYIPRYSEYKYIPST VHGDFKQTLDFWHMGRIFDGTPALNKQFIECDPTKRIFAVEESDEQVLYCHLWHSIQA NRKMSYYGDPSFR" CDS 2107..2454 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH73894.1" /translation="MKTKKRSFRASPTQGNSPFKEKNNGISQTVPDQSYSVREILEKF ASGTLPDLTREQTFSEDMPDLRGMDISELHQLKADARSDVATLKEREKTLKQKQKEQI NTPPTPPQPPKTD" CDS 2455..3306 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH73895.1" /translation="MPIPLPLAVAGISAVSSGVDALLTGGQNKKNREHQEYMYDKNNA YNTPQMQMQRYKAAGLNPHLIYGQGNSGNASMPGNPDTEAPQTKFADIAQNYASNKKQ QIEIDNMRKSMEVMDADITLKAATTANTLSSSAQTQQQVAHAAALWDNTQALAAANLG NAQETGVKLKAEVGAILATTNLTKTQQAQALQNIEESVARIKTLQADNKLKEAQLVEQ NMKNQMWKDGINPNDSAANQILKEIYKEFKTKEKEITEMLKFPYKVGDAINQGVRQLW NHQPVKQ" CDS 3310..4113 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH73897.1" /translation="MCLTPVTFKKTKITQYIKDSSPVQSVPCGKCLDCKKSRVNSWFV RLKNELKNATSAHFVTLTYDDETLPHSETWIPTLDYKDYQRTIKRLRKNYKTKIPIKY FAVGEYGTNGQRPHYHAIIFNMENPENLATEWKYGFTHVGEVTDASIYYTLKYCLKNL NTDKEKIDRLPEKALISKKLGIGYLTPQMQKYHTNDVSRSMTLAGNKKIALPRYYRDK LFTDAQKAHRAKLMEPIIKEKYEKTLDPLYTQKIAKAYDDERKKLAKTN" ORIGIN 1 atgagtatct tcgacaaaat ccaactaacg cgccccggtt caagttcctt taacctatcg 61 cacgaccgca aattctccct aaacatggga aaaatcaccc ctattctatg ccaagaaatc 121 gttccgggtg acaagttcaa tgtcaccacg caacaaatgc tacgatttgc ccctatgcta 181 tcccccgtga tgcatgaagt aaatgtattc acccatttct tcttcgtacc aaatcgactt 241 atattcgatg attgggaaaa attcataact ggcggagaat ctggaacaga ccaaacactc 301 ttcccgacca taacaaacct taacgtccaa atacgcgaac ttggcgatta tttaggtcta 361 ccgacctcaa gtttcggcag cgaaaaaata agccgcttac cctttaacgc gtataatcta 421 atctttaacg agttctaccg agaccagaac cttatcgacg aactcccaat aaataaagcg 481 ggcggtaaca ttgaccgcaa cgcactatcc tcagaagaac gcgcgacgtt ctcactacta 541 caaaaccgag catggcagca cgattatttt acctctgcat tgccatgggc tcaaaaagga 601 aaccccgtaa aacttccaat cggaacaacc gcggaaattt actacgacat gaacaaccgc 661 gtagcggatc aactaatccg tgacgctggc gcaccacatg acgtattaat accaccacat 721 gaccaatacc tagaaaaccg cggcggctca cttcagcaag aattatctgg cgaagtctca 781 aaaaaagtac acttagacct ccaaggcact cacaaagtag accttaccga cgccgtaagt 841 gctacaatca acgacctaag aaaagccttt aaattgcaag aatggctaga gaaaaacgcg 901 agagcgggtt ctcgttacgt tgaatcctta ctcgctcact tcggcgtaaa atcatcagac 961 gcaagactgc agagaccaga atttctgggc ggcggcatgt ctcccgtcat gatatcagaa 1021 acactacaaa cctcacaaac acaagacact ccacttggag aaatggcagg gcatggctta 1081 aacctcggaa aatcacattc attcaaccga ttcttcgaag aacacggctt cgtaatcggc 1141 gtaatgtccg taatgcctaa aactgcctac caacaaggaa tcccgaaagc gttctcaaaa 1201 ttcgacaaat tccaatactt ttggccagaa ttccaacaca ttggagaaca agaaatctta 1261 caaaaagaac tcaaattcga ccccttaaac aaagatgaaa tcttcggata tattccgaga 1321 tattcagaat acaaatacat accctcaacc gtccacggcg acttcaaaca aactctagac 1381 ttctggcaca tgggcagaat cttcgacggg acacccgcac ttaacaaaca attcatcgag 1441 tgcgacccta ccaaaagaat cttcgccgtc gaggaatcag acgagcaagt tctctactgc 1501 cacttatggc actctataca agccaataga aagatgtcgt actatggcga cccctctttc 1561 cgctaaaatt gttttttccg actataaaaa acaaacaaac aagacctctt tcacgaggtc 1621 ttttttgatt gatgacaacg tagttgtcga aaatcgaaaa aacccccaga cgatagtctg 1681 gattcacaca aaaaaactca cgtcctttaa ccacccaaaa aaagaccaga aaacaaaatg 1741 ctaagcccac tatgtaaata aactttaacg acgatttaga gcatgaggag gacacgcaca 1801 gcacgaacga cgaccgcgcc aacctatcga cgaaaagaaa aaatacaaaa agggcaaagc 1861 acaacaaaaa tctgaatcag atttcaataa tactatcttg atatattatt gctaattgac 1921 accgacaatt agaaaaaaaa aatatacctt taccaaagta ttaacaaaaa aacacccaat 1981 atcatggcaa aacgacgctc aaaccgcaga aacactagaa aatctgcaaa atcaagaaac 2041 aaaaaaatta catcgtacac gatgtcacgc ggcggtattc gcctttaacc ttaaaaattc 2101 atcacaatga aaacaaaaaa acgctctttc agagcatcac caacccaagg aaattcacct 2161 ttcaaggaaa aaaataatgg aatttctcaa actgtcccag atcaatcgta ctctgtacgc 2221 gaaattttag aaaaattcgc atctggaaca ctcccagacc taacccgaga acaaacattc 2281 tcggaagata tgccagatct ccgcggtatg gacatatccg aacttcacca actaaaagcc 2341 gacgcgcgaa gcgacgtcgc cacgttgaag gagagagaaa aaactctcaa acaaaaacaa 2401 aaagaacaaa ttaatacacc acctacacca ccacaacccc caaaaactga ttaaatgcct 2461 attcctttac ctctcgcagt agctggaatc tccgccgtat cttctggcgt agatgcacta 2521 cttacaggcg gccaaaataa aaaaaaccgc gagcaccaag agtacatgta cgacaaaaac 2581 aatgcgtaca acacgcccca aatgcaaatg cagcgataca aagccgcggg tctaaacccg 2641 catttaatct atggccaagg caacagcggc aacgcttcaa tgcctggcaa cccagacacg 2701 gaagcaccac aaacaaaatt cgcagacatc gcccaaaatt acgcttccaa caaaaaacaa 2761 caaatcgaaa tcgataatat gcgcaaatct atggaggtca tggatgcaga tataacccta 2821 aaagcggcaa cgaccgccaa cactttatcc tcctccgcgc aaactcaaca gcaagttgct 2881 cacgctgctg ctctctggga taatacccaa gcactcgcag ccgcaaatct cggcaacgca 2941 caagaaacgg gcgtaaaact caaggcagaa gtcggcgcaa tacttgcgac cactaatcta 3001 accaaaaccc aacaagccca agccctccaa aatatagagg aatcagtcgc ccgtataaaa 3061 actctgcaag ctgacaacaa actaaaagag gcccaactcg tagagcaaaa catgaaaaat 3121 caaatgtgga aagatgggat taaccccaac gattccgcag caaaccaaat tctaaaagaa 3181 atctataaag aatttaaaac gaaagaaaag gaaattacag aaatgttaaa atttccctat 3241 aaagtaggcg acgcaatcaa ccaaggcgtc cgccaactct ggaaccacca acccgtaaaa 3301 caatgataca tgtgcctaac tcccgtaact ttcaaaaaaa cgaaaataac gcaatacata 3361 aaagacagct cacccgtaca atctgtacca tgcggcaaat gcctagactg caagaaatcc 3421 cgtgtcaact cgtggttcgt ccgtctcaaa aacgaactca aaaacgcgac ttcggcgcac 3481 ttcgttacat taacttacga cgatgaaaca ctaccacact cagaaacatg gataccaaca 3541 ctcgattaca aggactatca acgcaccata aaacgattac gcaaaaacta caaaacaaaa 3601 attccgataa aatacttcgc cgtcggcgag tacggaacaa atggacaacg tccccactat 3661 cacgctataa tctttaacat ggaaaaccca gaaaacctag caacagaatg gaaatacgga 3721 ttcactcacg taggagaagt caccgacgca tcaatttact ataccttaaa atactgcttg 3781 aaaaatctaa atacagacaa ggagaaaatc gacagattac ccgaaaaagc cctaatatcg 3841 aaaaaattag gaatcggcta tctaaccccc cagatgcaga aataccacac taacgacgta 3901 agtcgatcaa tgactctcgc gggaaataaa aaaatagcgc tgccgcgcta ctaccgcgac 3961 aaactattca cagacgcaca aaaagcacac cgcgccaaac taatggaacc aataataaaa 4021 gaaaagtatg aaaaaaccct cgacccgttg tacacccaaa aaattgcgaa agcgtacgac 4081 gacgaacgca aaaaactcgc aaaaacaaac taaaaaaccc atgtactaca tggaaaacct 4141 tttcactaat cacataaaaa aattcac //