LOCUS MH617047 5252 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctcg936, complete genome. ACCESSION MH617047 VERSION MH617047.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 5252) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 5252) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH617047.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 66.781417x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..5252 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctcg936" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS 1..2028 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH74912.1" /translation="MQTTIGGDRLGSGSKETVSFRNYERSTHDLSYIWRSSMASGTLV PFMSKVALPGDKWEINLGCEVLTLPTLGPLFGSYKVQLDVFEIPIRLYNAKLHMNRLG IGMDMKSIFLPQIEVLTPNRITNGAGRTLDDNEQINASSLLKYLGISGLGSYHEDLIV NPLKRKFNAIPLLAYWSIYKNYYSNKQEEIGFHAHTTSALYQQAQTPIDAILTTNNGI EKGHCLGSTNGKQVSTGDNCIIYYPHNAIQPDPFQLGVYIGGTNSYLGLQFTDFIWDN TNKILTAYIAVEAADASTMYVKDQYSPAKDNNNSFFGLESFPLENIDKMRDKILQYTG SSALTITKDDLKPYSSPMESIESGLAYATQFSQESLGIKTYQSDLFNNWINTEWIDGT GGISELTAVDTTTGEFTIDALNIATKVYEMLNRIAVSGGSYDDWLEAVYTHERVKGIE EPVYCGSLIKELAFEEVISLAETTNKDGQKAPLGTLAGRGRLTGKHKGGKITISVNEP SYIMALVSLTPRVDYSQGNDWSTNLKTLDDLHKPALDGIGFQDLITEQMLWSDTVLSE AEGQTDLYPITNSLGKQPAWINYMTDVNKTYGAFAEQNNSMFMTLNRRYSKIDTPAQY GEIKDGTTYIDPSKFNGIFAETALSAQNFWVQIACNITARRKMSAKIIPNL" CDS 2107..2433 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74907.1" /translation="MYKTNILHQSNMHLDNKKEGETIEQKVVRLVQNKEPIKDGVPII YTDRKEGVNSAYNIRTDRWEIAVDALDRLAKSKEAKRDEIAKTAETEMKVVKDNKVEP LHGEAS" CDS 2520..3551 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH74908.1" /translation="MADDTSNSFISNLGLQTASNAVGAVVNQLTAKQQMQRQKELMDI QNRNQQAMMRQQMANQMKLNEQGQQIQLDTWEKTNYPAQIKMLQSAGLNPGLLYSKGG TGGTTGGQSGGSASGGSASGGNVQMAQGMNPVSIMELKNQMAQIELTKALADKARAET PEIHPTAEAGRQKLGAETANLGAEKEFTASKTRYQEIVNSYEGQTLEESLKQIQNNNA VLVNNIRKSGAEAKEAEETVNQKIKQAELKTVAEGLEIALLKENIINRKEQTLEIKEK IQVMSEELLQGWEKLDQSQKQVKINEMLGKFNTNLPSKIGQWTGIIGNILSGAKNVTM PNIQIGGSK" CDS 3684..4604 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH74911.1" /translation="MECKKQRANNWRIRLMEEIRHNKDGKFVTMTFTDEELIKLEYEI HKKNKKNLGQLNKITKKNTKYIPVNGYDLDNEIATLAVRRFLERYRKQHGTSIKHWLV TELGQESTERLHIHGIIWTSKAKTHIEKIWKYGTVNRNQKQWEDNYCTERTINYIVKY INKTDEIHKYYNPIILTSSGIGKQYVNRPDSQKNKFKGEDTKESYITRQGYKLPLPTY YRNKIYTEDEREMLWINLLNKEVRWVNGIKVDISKGEEDYNNLVKHARTVNKTLGYGN NIIKWDELKYEQQRRNIKKWTREQKQKRSF" CDS 4912..5247 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74909.1" /translation="MKQTDKVKQKSEKTPQSEPLRLVAEETRKQPSTGLNEQGEELVQ RDEVENTPFIVITINNESFGTFGKYRITETYHTKQQCKAELKAITWNRIVQIMTLVNE IMKEQTTKK" ORIGIN 1 atgcaaacaa caattggcgg agaccgcctt ggaagcggat ctaaagaaac agtaagtttc 61 agaaattatg aaagaagtac acacgacctg agctatatat ggagaagctc aatggccagc 121 ggaacactag taccatttat gagtaaagta gcactacccg gagataaatg ggaaataaat 181 ttaggttgcg aagtattaac actaccaaca ctcggcccat tattcggaag ctacaaagta 241 caattagacg tattcgagat acctataaga ctatataacg caaagttaca catgaacaga 301 ttaggaatag gtatggacat gaaaagtata ttccttcctc aaatagaagt actaacacct 361 aacagaataa caaacggagc aggaagaacc cttgatgaca acgaacagat aaacgcaagt 421 agcttattaa aatacctagg tataagcgga cttggcagtt accatgaaga tttaatagta 481 aatccgttaa aaaggaaatt taatgcaata ccattactag catattggtc tatatacaag 541 aattactaca gtaataaaca agaagaaata gggtttcacg cacatacaac aagtgcatta 601 tatcaacaag ctcaaacgcc aatagacgca atactaacaa caaataacgg tatagaaaaa 661 ggacattgct taggatcgac aaatggaaaa caagtaagca caggagataa ctgtataata 721 tactacccac acaatgcaat acaaccagat ccattccagt taggggtata tataggcggt 781 acaaatagtt acctgggact acagtttaca gacttcattt gggataatac aaacaaaata 841 ttaactgcat atatagcagt agaagcagca gacgctagta caatgtacgt taaagaccaa 901 tacagtccag caaaagataa taacaactca tttttcggat tagaaagttt tccactggaa 961 aacatagata aaatgagaga taaaatactg caatacacag gtagcagtgc attaactatt 1021 acaaaggatg acttaaagcc gtacagctcg ccaatggaaa gcatagaaag tggattagca 1081 tatgcaacac aatttagtca ggaaagccta ggaataaaaa cgtatcaaag tgacttattc 1141 aataactgga taaatacaga atggatagac ggaactggcg gaatatcaga acttacagca 1201 gtagatacaa caacaggaga attcacaatt gacgcactga acatagcaac aaaagtatat 1261 gaaatgctaa acagaatagc agtaagtggc ggtagttatg atgactggtt agaagctgta 1321 tatacacacg aaagagtaaa gggaatagaa gaacctgtat attgtggaag cctaataaaa 1381 gagctggcat ttgaagaagt aataagccta gctgaaacaa caaataaaga cggacaaaaa 1441 gcaccactag gaacactagc aggaagggga agactaacag gtaaacataa aggcggaaaa 1501 ataactataa gtgtaaatga accttcatac ataatggcat tagtctctct aacaccaagg 1561 gtagattatt cacaaggaaa tgactggagt acaaatctaa aaacattaga tgacctacat 1621 aaaccggcct tagacggtat aggattccag gacttaataa cagaacaaat gttatggagt 1681 gacactgtac taagtgaagc agaaggacag acagacttat atcccataac aaattcactg 1741 ggtaaacaac cagcttggat taactatatg acagatgtaa ataaaactta tggagcattc 1801 gcagaacaaa acaattcaat gtttatgaca ctaaacagaa gatacagtaa aatagacaca 1861 cctgcacaat acggagaaat aaaagacgga actacatata ttgacccgtc aaaattcaat 1921 ggaatattcg cagagactgc actatcagct caaaacttct gggtacagat agcatgtaac 1981 ataacagcaa gacgcaaaat gagtgcaaaa ataatcccaa acttataaat aaaattacat 2041 gggggttagt caggatactg actgaccctc ataattaact gaatatcaac cctaaatttt 2101 aataaaatgt ataaaacaaa cattctacac caaagtaata tgcacctaga taataaaaaa 2161 gaaggtgaga caatagaaca aaaagtggta agactggtac aaaacaaaga accaattaaa 2221 gacggagtgc caataatata cacagataga aaagaaggag taaacagtgc ctataacata 2281 aggactgaca gatgggaaat agcagttgac gcactagaca gactagcgaa aagtaaagaa 2341 gctaaaagag atgaaattgc taagacagca gaaacagaaa tgaaggtagt aaaagacaac 2401 aaagttgagc ctctacatgg cgaagctagc taaaaagcga gtccaaaaaa gaacttggta 2461 cgcacgtaga tatatataac aaggcgaaat aattacaatt tttaaaaaaa tagcgaaaaa 2521 tggcagacga tacaagtaat agcttcataa gtaacctagg gttacaaact gcatcaaatg 2581 cagtaggagc ggtagtaaat cagctgacag caaaacaaca aatgcaaagg cagaaagaac 2641 taatggacat tcaaaacaga aaccaacaag ctatgatgag acaacaaatg gcaaaccaaa 2701 tgaagttaaa tgaacaagga caacaaatac aattagatac ctgggagaaa acaaactatc 2761 cagctcaaat aaaaatgcta caatcagcag gccttaaccc cggtctatta tatagtaaag 2821 gcggaacagg cggaacaact ggtggccaga gtggcggaag tgcaagcggt ggaagtgcaa 2881 gcggtggaaa cgtacaaatg gcacaaggaa tgaacccagt aagcataatg gaactgaaaa 2941 accaaatggc acaaatagaa ctgacaaaag cactagcaga caaagccagg gcagaaacac 3001 ctgaaattca tccaacggca gaagcaggaa gacaaaaact tggagcagaa acagcaaatc 3061 taggagctga aaaagaattt acagcaagta aaacaagata ccaagaaatt gtaaacagtt 3121 atgaaggaca gacattagaa gaaagcctaa aacaaataca gaataacaac gcagtattgg 3181 taaataatat cagaaagtca ggagctgaag caaaggaagc cgaagaaaca gtaaatcaga 3241 aaataaaaca ggcagaacta aagacagtag ctgaaggact ggaaatagca ctactaaagg 3301 aaaatataat taacagaaag gaacagacct tagagataaa agagaaaata caagtaatga 3361 gtgaagaact cctacaaggc tgggaaaaac tagaccaaag ccaaaaacaa gtaaagatta 3421 acgaaatgct aggaaagttt aatacaaact taccaagtaa aataggacaa tggacaggaa 3481 taataggtaa catactaagc ggagcaaaga acgtaacaat gccaaatata caaattggcg 3541 gaagtaaata accatactaa gtgtgcctat atccaagatt aatacagaac cgcaagtata 3601 aaccgaatat aaaaaatggg gggaatccgc cccccattaa agacggtagg acggcacttg 3661 tcgcaatcgg ttgcggtaag tgcatggaat gtaaaaaaca aagagcgaat aattggcgaa 3721 ttagattaat ggaagaaata agacacaata aagacggtaa attcgtaaca atgacattca 3781 cagatgaaga actgataaaa ctggagtacg aaatacataa aaagaacaaa aagaaccttg 3841 gacaactaaa taaaataact aaaaagaata ccaaatatat accagtaaat ggatatgacc 3901 tagataatga aatagcaaca ttagcggtta gaagattcct agaaagatac agaaaacaac 3961 acggtacaag tataaaacac tggctagtaa ctgaactagg acaagagagt acagaaagac 4021 tacacataca cggcataata tggacatcga aagcaaagac acatatagaa aaaatatgga 4081 agtacggaac agttaacaga aatcaaaaac aatgggaaga caactactgc actgaaagaa 4141 caataaacta tatagtgaaa tacataaaca agacagacga aatacataaa tactacaacc 4201 caataatatt aacaagtagc ggtataggaa aacagtatgt aaatagacct gacagccaaa 4261 aaaacaaatt caaaggagaa gatacaaaag agtcatacat aacaagacaa ggttataaat 4321 taccattacc aacatattac agaaataaga tatacacaga agatgaaaga gaaatgttat 4381 ggataaacct actaaataaa gaagttagat gggtaaacgg aattaaagta gatataagca 4441 aaggcgaaga agattacaac aacctagtaa aacacgcaag aacagttaat aaaacactag 4501 gatacggtaa caacataata aaatgggatg agttaaaata cgaacaacag agaagaaata 4561 taaaaaaatg gacaagagag caaaagcaaa aaagaagttt ttagggggaa acacattgag 4621 taagaatgtt tccaaaccca aagtggagct attcgctacc tgcggtgcat taataatatt 4681 gataatcata acgacacaat gcagagcaag cagagaaatt gaaataaatt acaaaaaaac 4741 aatagaaatc aaaaaataaa gttaatattg aatgaaaata ctacaattat gttacttcac 4801 aaacttttgg gatagcaaat atgaaaaagc taagatggtt tacagaaact ctatacgtag 4861 ataaagaaac tggtgaatgg ataccagcat ataaatttaa aacagactat tatgaaacag 4921 acagacaaag taaaacagaa atcagagaaa acaccgcaat cagaaccatt acggttagtt 4981 gcagaagaga cacgcaaaca accttcgact ggtttaaatg aacaaggcga agaactagtc 5041 caaagagatg aagtagaaaa cacgcccttc atagtaataa caattaataa cgaaagtttc 5101 ggaaccttcg gtaaatatag aataactgaa acgtaccaca caaaacaaca gtgtaaagca 5161 gaactaaaag ctataacatg gaatagaata gtacaaatta tgacactggt aaatgaaata 5221 atgaaagaac aaacaactaa aaagtaaaaa tt //