LOCUS MH648945 4146 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctdb011, complete genome. ACCESSION MH648945 VERSION MH648945.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074539 Sequence Read Archive: SRR7122366 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4146) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4146) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (19-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH648945.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 8.68x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4146 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctdb011" /isolation_source="red snapper tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043880; metagenomic" CDS 1..1608 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXQ65706.1" /translation="MKQPRNHTTNTKIGSANYHQFAEVPHLNIPRSTFDRSHGYKTTF ESGMLVPILVDEALPGDTFSTKMTAFARLSTPIAPIMDNMYMDTHFFSIPVRLVWDNW QQFMGETEPSDPVTTPPAAYAHNVPQMVSPAGGYLEQTLSDYLTIPTKVAALTHSSLW HRAYNLVWNQWFRDENLQDSIVVDTDNGPDTSTDYVLKRRGKRHDYFTSCLPWPQKGA AVDLPTGTSAPVKYSQISGNTDSVDQYVAVDGNDYRGYGTAPATYTGDLVPNAKKQMY ADLTDATAVTINELRLAFATQRYLEIQARGGTRYIEVIKAHFNVSSPDGRLQRSEYLG GGSSPVNISPVAQTTSTDASGNTTPQGNLAAIGTTVLSDHGFTKSFTEHCLIIGLVSV RADLTYQQGLQRMFSRSTVYDFYWPSLSNIGEQAVLNKEIYADASADDDLTFGYQERY AEYRYKSSSITGKFRSNATGTLDYWHLSQDFDTLPALGNTFISDTPPVDRVIAVPTEP QFIFDSLFNMKSTRPMPIRSVPGGLHF" CDS 1608..2246 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXQ65707.1" /translation="MKFLENLSDGAGSLIGGLASGLFGYRGTRAQNIASAAQAKQQMD FQERMSNTAIQRRMADLKKAGLNPILAGKHDASTPSGAMAPQFNKAQVALSSLATAAN IENIMANTGLVNTKAGAIGPASKLGVFLTDIMDKLGFDPDSERNISNAAEVYRNNQKK NNVFVTHTRSDSESKWKPATQDHYLNKKNILLNKISKARQRIRETNRRNRYD" CDS 2239..2742 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="internal scaffolding protein" /protein_id="AXQ65708.1" /translation="MTKAKTQKEITKKHVLSANYQKHYMRSAYGKPAPSTIKCDDGIT EQHHTEQCDVNNILATYLKTGIIPPSDPNAQYGDLSDFDYQSMQNQIANATSLFEQLP DNVKHRFGNEPYRFLNFVQDEKNYDELVEMGLANNAPTTSSEDEALPVTDAAPQEQVM SDDTVAT" CDS 2932..3822 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXQ65704.1" /translation="MSCFHPLYGFKSSSGKWLSTSNNINAEPMTVPCGQCTGCRSEYS RQWALRNMHEASLYNNNCFITLTYNEENLPQDNSLQKKAFPKFIRSLRKRNKGKQIRY YACGEYGDNFGRPHYHAILFNYFPDDTVHLKKDLYTSKSLSDAWRHKGHVSVGNVTFQ SAAYVSNYVQKKINGKQKLDHYSKYNKTTGELISWREPEFSLMSRKPGIGKKWFDKYY KDIYQTGKDGLHMNGKFMKPPKYYDIKYKEDFPDLMEILKQNRIEKFEEIAHLFTPES LAAAEQTHKARMSQYKRKLK" CDS 3832..4104 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXQ65705.1" /translation="MKLQLFTIYDDKEEIYYAPFFLLNEQTALRQFGDMANDPDSKIS KHPADYTLWHLGSYEDASATLTPLKTKKCLAHANEHVIQFDNLKTA" ORIGIN 1 atgaaacaac ctagaaacca cactacaaac acaaagattg gctctgccaa ctatcaccaa 61 ttcgccgaag tacctcactt aaacattcca cgttcaactt ttgaccgttc tcacggctat 121 aagactacat tcgaatcagg aatgttagtc cctattcttg ttgacgaagc tctacccggc 181 gatacctttt ctactaaaat gactgccttt gcacgtctat ctacacctat tgctccaatc 241 atggataaca tgtatatgga cactcacttc ttctctatcc cagtacgact tgtatgggat 301 aactggcaac aattcatggg tgaaactgaa ccctctgatc ctgttactac acctcctgca 361 gcttatgctc ataatgttcc acaaatggtc tccccggctg gaggatacct tgaacaaaca 421 ctatcagact atctaacaat acctactaaa gtcgctgctc taactcattc ttctctatgg 481 caccgtgctt ataatctagt atggaaccaa tggttccggg atgaaaactt acaagactct 541 attgtcgttg ataccgacaa tggtcccgac acctcaaccg actatgtact taaacgacgt 601 ggaaaacgtc atgactattt cacttcctgt ctaccatggc cccaaaaagg tgccgcagta 661 gaccttccta ctggaacttc tgcacctgtt aaatactctc aaatctctgg caatactgac 721 tcagtcgacc aatacgttgc agtcgacggt aatgactacc ggggatacgg tactgcacca 781 gctacctata ctggtgatct tgtccctaat gctaaaaaac aaatgtatgc cgacttaacc 841 gatgctactg ctgttactat aaatgaacta cgtctagcct tcgctacaca acgatatctt 901 gaaatacaag cccgtggcgg tactcgttat atcgaggtta taaaagcaca tttcaatgta 961 tcatcaccag acggacgctt acaaagaagc gaatacttgg gaggaggttc ctcccctgta 1021 aatatatcac ctgttgcaca aactacttca acagatgctt ctggaaatac tacacctcaa 1081 ggtaacttag ctgcaatcgg tacaactgta ctatctgacc atggattcac taaatccttt 1141 actgagcact gcctaataat cggactcgta tctgtccgag ctgacctaac ttatcaacaa 1201 ggtctacaac gaatgttctc tcgttcaact gtctacgact tctactggcc ttctctatct 1261 aatatcggcg aacaagccgt cctaaataaa gaaatctatg cggatgcgtc tgccgacgac 1321 gaccttactt tcggctatca agaacgttat gccgaatacc gctataaatc atcatctata 1381 actggaaaat ttcgttctaa tgctactggc actcttgatt actggcacct atctcaagac 1441 ttcgatacac taccagcact aggaaatact ttcatatctg atacaccccc tgtcgatagg 1501 gtaattgcag taccaactga accccaattc atattcgact ctttattcaa catgaaatct 1561 acacgtccaa tgccaatcag gtctgtacct ggtgggctac atttctgatg aaatttctag 1621 aaaatttatc agatggcgct ggcagcctta taggcggtct agcgtcagga ctctttggtt 1681 atcgaggtac cagagcacaa aatatagctt ctgctgctca agctaaacaa caaatggact 1741 ttcaagaacg aatgtccaat actgcaatac aaagacgaat ggctgactta aaaaaagctg 1801 gactaaatcc cattctagct ggaaaacatg atgcttctac accatccgga gctatggccc 1861 ctcaatttaa taaagctcaa gtagctttat ctagcttagc tactgctgca aatattgaaa 1921 atataatggc caacactggt ttagtaaata ccaaagctgg tgcaattggc cctgcttcta 1981 aactgggtgt attcctaaca gacataatgg ataaactcgg ctttgaccca gattctgaaa 2041 gaaatattag taatgccgct gaagtttata gaaacaatca aaaaaaaaat aacgtctttg 2101 taacacatac tcgatcagac tctgaatcaa aatggaaacc tgctactcaa gaccactatt 2161 taaataagaa aaatatatta ctaaataaaa tatcaaaagc cagacaacga attcgtgaaa 2221 caaataggag aaatagatat gactaaagct aaaactcaaa aagaaataac taaaaaacat 2281 gtgttatctg caaactatca gaaacactat atgcgctctg cctatggtaa acctgcgcct 2341 tcaacaataa aatgtgatga cggtataacc gaacaacatc acaccgagca atgtgatgta 2401 aataacatcc ttgctactta tcttaaaacg gggattatcc ccccttctga ccctaacgct 2461 caatatggcg atttgtcaga cttcgactac caatctatgc aaaatcaaat agcaaacgct 2521 acctctctat ttgaacaatt gcccgataac gttaagcatc gtttcggaaa tgaaccgtat 2581 aggttcttaa acttcgtcca agacgaaaaa aactacgacg aactcgtcga aatgggactt 2641 gctaataatg cccctactac ttcatctgaa gatgaagcac tacccgtcac cgacgcagct 2701 ccacaagagc aagttatgag tgacgataca gttgctactt gatacaactg tactgagtgg 2761 tccttttgac cactcaaaaa ctataaaaac gactataagg agtcaaaaaa tgagaaaaag 2821 attcaaagta tctaaatcac gttctaaaag aatgtttact aaacatgcgg tacgcacaca 2881 taaaagaaac agagttcgct caaacgctat gcgtggcgga ataagacttt aatgtcctgt 2941 ttccacccgc tctatggatt taaatcctct agcggaaaat ggctctcaac atctaataat 3001 ataaatgctg agcctatgac cgttccttgc ggtcaatgta ctggctgtcg tagcgaatat 3061 tctcgccaat gggcgttaag aaatatgcac gaagcctctc tatataataa taattgcttt 3121 ataacactaa cctataatga agaaaacctc ccacaagaca actctctcca aaaaaaagcg 3181 ttccctaaat tcattcggag cttgcgtaag aggaataagg gaaaacaaat acgctactat 3241 gcttgtggtg agtatggcga caattttggt cgccctcatt atcatgcaat tctatttaac 3301 tacttccctg atgacacagt tcatctaaaa aaagacctct atacttctaa atctctctct 3361 gacgcttggc gtcataaagg acatgtgtcc gttggaaatg taactttcca atcggctgct 3421 tatgtcagca actatgtcca aaaaaaaatt aatggcaaac aaaaactaga ccactattca 3481 aaatataata aaactactgg agaactaatc tcttggcgtg agcctgaatt ctccctaatg 3541 tctagaaaac ccggaatcgg aaaaaaatgg tttgacaaat actataaaga catctaccaa 3601 acaggtaaag atggcttaca catgaatggc aaattcatga aaccacctaa atactatgat 3661 attaaataca aagaagattt tcctgactta atggaaatct taaaacaaaa ccgaattgaa 3721 aaattcgagg aaattgcgca cctctttacg ccagaatctc tggcagcagc cgagcaaact 3781 cataaagcta ggatgtctca atataagcgc aaactaaaat aaggaaatac tatgaaacta 3841 caactattca caatctatga tgataaagaa gaaatctatt atgcgccttt cttcttactt 3901 aatgaacaaa ctgccctccg tcaatttggc gatatggcaa atgaccctga ctcaaaaatt 3961 tcaaaacacc ctgctgacta tactctatgg catctagggt cttatgagga cgctagtgcc 4021 accttaacac ctctcaagac aaaaaaatgt cttgcacatg ctaatgagca tgtgatacaa 4081 tttgacaatc taaaaacggc gtgatactat atcacataat ataaattata cgaaggagtc 4141 agtcta //