LOCUS MH616854 4753 bp DNA circular ENV 29-MAR-2019 DEFINITION Microviridae sp. isolate ctge666, complete genome. ACCESSION MH616854 VERSION MH616854.2 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4753) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4753) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, USA COMMENT On Mar 29, 2019 this sequence version replaced MH616854.1. ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 12.174837x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4753 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="ctge666" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /metagenome_source="animal metagenome" /note="genome binned from sequencing reads available in SRX4043871; metagenomic" CDS join(4509..4753,1..4) /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74015.1" /translation="MQQSTSAPPNKPIAVPPPSPEHYEEALFSMEIYLALVYHSTPEH VPNRWQILTPYLKLNTMPVWKLIYQYEEIFNHDVNQPQ" CDS 1..1566 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH74018.1" /translation="MKQNFMNTIKVETPSTNVFDLTHDHKLSGNMGFLIPTMTLECIP GDNHTISYESLLRFAPMLAPIMHRIRQYFHTFFVPSRVLWAGWEEYISPSEPGATPPI HPYINFGPNGGGENPIVSGSLADYLGLPLTDDLNADQTAGARVSAFPFAAVQKIYNDY YRDQNLIPEVEWSLTDGDNSTVGDLLVLRQRAWEHDLFTASLPFAQKGAPVDLPLGTI GDLPINVNTLDPNFTTWDALFNGNPGTMSVPNQDSDNPAIPTGDMYAEGANATLGATT INDFRMALRLQEFLETDARGGTRYVESIYTHFGVKSDDARLQRPEYITGSVQNVSISE VLNTTGTDDAPQGDMAGHGIAYTQDDQRASYYCKEHGWIITLMSIMPQTAYQQGIPKH FLRINDRYEYMWPKMAHLGEEAVTNQEIYAYTVADPITGPDATFGYMPRYYDYRYQQN RVSGDFQTNLAFWHEGRIFETQPSLNDVFITCVPSGRIFAVPDPATQKMWVQVLNKIK SARKIPFFGTPTI" CDS 1570..2094 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH74019.1" /translation="MCLTPINLKDRSHPVPCGRCPECRKRRAAGWAFRLQQQLLDSIT ANFITLTYETAHVPISNSKRLSLCKSHCQSFFKRLREAHPVDYLRETPIKYYLAGEYG TNTWRPHYHVILFNSKLELIQPSWKYGQIHYDTVNSATIAYTLKYICKPKRVPQYQAD DRVPEFSLMSKNLA" CDS 2112..2381 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="replication initiator protein" /protein_id="AXH74017.1" /translation="MVKWHKSDLEERQYCSIEGGKKIAMPRYYKDKIYSSEEKGYLKG YNEWYKNTQDEMKIRRNKVETLNHRQQYVELQFRIMNKPDTKNKL" CDS 2733..2975 /note="No conserved domains" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH74016.1" /translation="MKNHNSQNYRLSMPIKNQMSQEWISNATEPQLRDALRLMEALVP SEPKFAEITTKALFKELRRRQAPKPAEFIQLALTFS" CDS 3293..4252 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="DNA pilot protein" /protein_id="AXH74014.1" /translation="MPALAGPIIAAAASALSTGGQLYANAKMNKKAIKYNREAYARQR ADALADYHMQNEYNSPAAQMARFKEAGLNPNLIYGSGNGTEASPIRNSEMQSFQGDVP NFSNAGGQMVADYLTTKMNAQQLDNLKKQNDVLTAEAQLKAAQTINTLTGTEVSKFNL SRDTATLAYDIDAKKQAVNKLLQDILHGQASTTATSDANTRANQLQAGTVKQQAATLA ATELQNAKTQSERDEILEKIKLLKQSQDMNKFELDLNKKGFTRSDDVKYRLGAKIWDA MTNGMSIKQAIDKVSKELTAPTHGGKNTSHEYKKAGFGFFPKK" ORIGIN 1 atgaaacaaa atttcatgaa caccatcaag gtcgaaacac cgtcaaccaa cgtgtttgac 61 cttactcacg accacaagct atctggaaac atgggtttcc tcattcctac aatgacactg 121 gaatgtatac ccggcgacaa tcacacaata tcttacgaat ctcttttaag attcgctcca 181 atgctcgccc caataatgca tcggataagg caatactttc acaccttctt cgttccctct 241 cgtgtactat gggcaggatg ggaagaatac atatctccat cagaacccgg agcaacacca 301 cctatacacc cttatataaa tttcggccca aatggaggtg gtgaaaatcc catagtcagt 361 ggctcattag ccgactatct tggactaccg ttaactgacg acctcaatgc cgaccaaaca 421 gctggagcaa gagtatcagc tttcccattc gctgcagtac aaaaaatcta taacgattat 481 tatcgcgacc aaaatctaat tccagaagtg gaatggtcat taaccgatgg tgataattct 541 acagtaggag acttattagt ccttcgtcaa cgtgcatggg aacacgactt atttacagca 601 tcattaccct tcgcacagaa aggcgcaccc gttgacttac cactcgggac aataggtgac 661 ttaccaatta atgttaatac acttgaccca aatttcacaa catgggatgc actattcaac 721 ggcaacccgg gtactatgtc agtaccaaat caggattcag ataatccagc aatacctacc 781 ggcgatatgt atgccgaagg tgctaacgct acacttggag ctacaacgat taacgatttc 841 cgtatggcac ttagactaca ggagttcctt gaaacagacg ccagaggcgg cacacgatat 901 gtggaatcaa tctataccca cttcggagta aaatcagatg acgcacgtct ccaacgccct 961 gaatatataa ccgggtccgt ccagaatgta tcaatttcag aagtacttaa cactactgga 1021 acagatgatg caccacaagg agatatggca ggtcacggca ttgcatatac gcaggatgac 1081 caacgtgcat cttactattg caaagaacat gggtggataa taacactcat gtcaataatg 1141 ccacaaacag cttatcagca aggaatacca aaacactttc ttcgaatcaa cgaccggtac 1201 gaatatatgt ggccaaaaat ggcacatctc ggagaagaag cggtaaccaa tcaggaaatc 1261 tatgcataca cggttgccga tccaataacc ggacccgacg ccactttcgg ctatatgcca 1321 cgatactatg attaccgtta tcaacaaaac agggtttcag gagactttca aacaaacctt 1381 gctttctggc atgaaggcag aatcttcgaa actcaaccgt cacttaatga tgtatttatc 1441 acctgtgtac cttcaggaag gatatttgcg gtacctgatc cagcaacaca aaaaatgtgg 1501 gttcaggttc ttaataaaat caaatcagct cgcaaaattc ctttcttcgg aacaccaaca 1561 atctaagcta tgtgcttaac tcctataaat ctgaaagacc ggtcacaccc tgtgccttgc 1621 ggacgctgcc cagaatgcag aaaacgcagg gccgcaggtt gggccttcag attacagcaa 1681 caactacttg acagtataac agcaaacttt ataactctaa cttatgagac agctcatgta 1741 cctatcagca attcaaaacg actttcattg tgcaaaagcc attgtcagtc attcttcaaa 1801 aggctacgag aggcacaccc cgtggattac ctcagagaaa cccctatcaa gtactatctt 1861 gccggagaat acggcacaaa cacttggcgg cctcattatc atgttatctt gttcaattcc 1921 aaacttgaac taatacaacc ttcatggaaa tacggccaaa ttcattacga caccgtaaac 1981 agcgccacaa tcgcctatac gttaaagtac atttgtaaac ctaaaagagt accccagtat 2041 caagcagacg acagagtacc agaattctca ctcatgtcaa aaaacttggc ctgaactata 2101 ttaatcctac tatggtaaaa tggcacaaat ccgaccttga ggaacgtcaa tactgttcaa 2161 tagaaggtgg caagaaaata gctatgcccc gatactataa agacaaaata tattcctcgg 2221 aagaaaaagg atatctaaaa ggttataacg aatggtacaa gaacacccag gacgaaatga 2281 aaattcgtcg caataaagta gaaacattaa atcaccgtca gcagtatgtg gaattacaat 2341 tccgcatcat gaacaaacct gacacaaaaa acaaattatg aaatgctact tcacaaagca 2401 agacagaaaa gaaatccatc attcacaatg gagagaggga gaaatcaata caaaaccttc 2461 taaaactcgc ccaaatgaat cttacacaat gtccgaaatt gtcactcgtt cccaaatggg 2521 actacctcta tctgttaaaa catttgtccc cgcctactat ggcgaggaaa tgccaaatct 2581 ccgtaaactg gatatctcgg aagcgaaagc catcattgaa gaaaacaagc gcaaaattga 2641 cgaagtcaat aaaactgtac aggctcgcaa agcagcagcg caaaacctaa ggttaacaga 2701 acaaatcaga aatcaaatta aaatcgagga agatgaaaaa tcacaactcg caaaattaca 2761 ggctaagtat gccgataaaa aaccaaatga gtcaggagtg gatctctaac gctacagaac 2821 cacagcttag agacgcattg cggctcatgg aagccctcgt tccgtcagaa cccaagttcg 2881 cggaaataac aacaaaggcc ctgtttaagg agctacggcg acgacaggcc ccaaaaccag 2941 ctgaatttat tcagctagca ctaacattct cttgacatat tagtgctaat tgaccggaat 3001 cggtcaaatt aacacaaaac aggggggtga aaatgggggg atgtgccccc ctcatctcat 3061 catccaaaca aaaaataata aatgataaaa tcatttaaaa aaactgctct ttttgcccac 3121 ttccgaaaac cgagtgagga cgacatggcc gcaaagcggc tcggaggacg acgagggtcg 3181 gaagtcccgg acaaaaagca gtaaaacgcc agcacggtaa caccggctgg caaagatgtt 3241 tggatgaagt aaaagcagta acaaattatc taactaatta aaaaactcta ttatgccagc 3301 tttagcaggt ccaataatag cagcagccgc cagtgcttta agcacaggcg gccagctcta 3361 cgcaaatgcc aaaatgaaca aaaaggcaat caagtacaac cgagaagcat acgccagaca 3421 acgtgcggat gcactcgcag attatcatat gcaaaatgaa tataactctc cagcggccca 3481 aatggcccgc tttaaagaag ccggcttaaa tccaaatctt atatacggtt caggcaatgg 3541 taccgaagcc tcgcctatca gaaattcaga aatgcaatca tttcaggggg atgttccaaa 3601 cttctcaaat gctggcggtc aaatggtagc ggattacctt actacaaaaa tgaatgcaca 3661 acagcttgat aatcttaaaa agcaaaacga tgtccttaca gcagaagcgc aacttaaagc 3721 agcgcaaaca atcaatacgc ttacaggaac tgaagtatct aaattcaact tgtcccgtga 3781 cacagccaca cttgcttacg atatcgatgc taaaaagcaa gctgttaaca agcttctcca 3841 agacatactt catggacaag cctctaccac agccacatcc gacgctaaca cacgagctaa 3901 tcaattacaa gctggaacag ttaaacaaca agcagcaact ctcgcagcta ccgaattaca 3961 aaatgccaaa acacaatcag aaagagacga aatccttgaa aaaatcaagc tcttaaaaca 4021 gtcgcaagac atgaacaaat tcgaactcga ccttaataaa aaaggattca caaggtcaga 4081 tgatgttaaa tatcgtctcg gtgctaaaat atgggatgca atgacaaacg gtatgtcaat 4141 aaaacaggct atcgataaag tcagtaaaga acttacagca ccaacgcatg gaggaaaaaa 4201 tacttctcac gagtataaaa aagcaggatt cggatttttt ccaaaaaaat aatatattcg 4261 ttcatgagat atagacgaca tactaaacga gttcgttata aacacgcctc aagaggcgga 4321 acccgttggt aacctacgac aacactaaga cctttcctaa cggaagggtc ttttcgcaac 4381 acacaaaccc ctatcaaact aaaaacgacg tcgagggcga agcccgatat aataccctaa 4441 aaaacttccc gccgaaggcg cccccggagg gccgccggag gcaatacttg taatttaaaa 4501 ccaatcatat gcaacaaagc acttcagcac caccaaacaa accaattgca gttccaccac 4561 cgtcacccga acactatgaa gaagccctct tctctatgga aatctatctc gcattggtgt 4621 atcactcaac acctgaacac gttccaaacc gatggcaaat tctcactcct taccttaaac 4681 tcaacaccat gccagtttgg aaacttatct atcagtacga agaaatattt aatcacgatg 4741 taaatcaacc gca //