LOCUS MH617304 4911 bp DNA circular ENV 05-AUG-2018 DEFINITION Microviridae sp. isolate cthh626, complete genome. ACCESSION MH617304 VERSION MH617304.1 DBLINK BioProject: PRJNA393166 BioSample: SAMN09074552 Sequence Read Archive: SRR7122375 KEYWORDS ENV. SOURCE Microviridae sp. (animal metagenome) ORGANISM Microviridae sp. Viruses; ssDNA viruses; Microviridae; unclassified Microviridae. REFERENCE 1 (bases 1 to 4911) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Uncovering a Universe of Circular DNA Viruses in Animal Metagenomes JOURNAL Unpublished REFERENCE 2 (bases 1 to 4911) AUTHORS Tisza,M., Buck,C., Pastrana,D., Welch,N. and Peretti,A. TITLE Direct Submission JOURNAL Submitted (12-JUL-2018) Lab of Cellular Oncology, National Cancer Institute, 37 Convent Dr., Room 4118, Bethesda, MD 20814, United States of America COMMENT ##Genome-Assembly-Data-START## Assembly Method :: SPAdes v. 3.11.0 Genome Coverage :: 6.776420x Sequencing Technology :: Illumina ##Genome-Assembly-Data-END## FEATURES Location/Qualifiers source 1..4911 /organism="Microviridae sp." /mol_type="genomic DNA" /isolate="cthh626" /isolation_source="minnow tissue" /db_xref="taxon:2202644" /environmental_sample /country="USA" /collection_date="01-Jun-2017" /note="genome binned from sequencing reads available in SRX4043871; metagenomic; derived from metagenome: animal metagenome" CDS 1..1614 /inference="protein motif:CDD:222784" /codon_start=1 /transl_table=11 /product="major capsid protein" /protein_id="AXH76060.1" /translation="MHRNQSVQAHNFAMVPRSDVPRSGFKIENAYKTTFNGGILVPVY CEEVLPGDTFNLKATMFARLATPIVPVMDNLYLESFFFFVPNRLVWDNWKRFCGEQDT PGATVDYVVPKIGVNSSHVQPGTIYDYFGIPGAGQLTGGLAINALPFRAYNLIWNEWF RDENLQVPLTVNKTDSDVPGNYQLRRRGKRHDYFTSCLPWVQKGNSVTLPLGTSAPVK TSSTGQVSGPRSGLSFLNATTGNAITNSGDFGIDVNSSMVYNASGITGAIGGVYPNNL YADLSAATAATINQIRQAFQIQKLLERDARGGTRYTELVKSHFGVTSPDARLQRPEYL GGGMTPINIQPIAQTQATAADGTPLGALAAYGTALAHNHGFTQSFTEHGHVIGLISVR ADLNYQQGCNRMWFRKTRYDYYWPVFAMLGEQAVLNQEIYCTGTATDEQVFGYQERWA EYRYKPSLITGHLKSTHPQPLDIWHLAQKFTALPTLNDSFIQDAPPIDRIIATTEQTG QQFVLDCFFRNKAARPLPMYSVPGLVDHF" CDS 1614..2327 /inference="protein motif:CDD:164789" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH76061.1" /translation="MIGLAAATLGSAAIGAAGSLFSGKQSADFAESSYKHRYQWQVKD LQKAGLNPMLAVQQGAPNVPQPNFENIGEGAVKGAAVGVNAALQKAQMANVAADTQLK GSATALNVASARESAIRAGIQEASLPFAAQNAEVGALSADRSFQIMGRQLEKLGFEVG SARLSLEQQEKMNPILLEGQRLINRGMDADLVRKEVYGRLWSIVPDKSTIDKAWEIIS NPQDWSKNISDWGKRHAPR" CDS 2314..2778 /inference="protein motif:CDD:164781" /codon_start=1 /transl_table=11 /product="minor capsid protein" /protein_id="AXH76062.1" /translation="MRPAELVHILEGFDMSTKKCVFPRVLSGLNYDRAAWSDMHGLEC KDPSLAVQSQKDEADINTIVRNFGVTGQLPQGVRIPSYGDFDSVDDYRTAIDAVRAAE ASFLAMPSDLRARLGHDPARFVEWCADVGNLEEMRKLGLAVPAPVSDSGASA" CDS complement(3640..3933) /inference="similar to AA sequence:UniProtKB:A0A0B6YLH1_9EUPU" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="AXH76059.1" /translation="MSIIVSKRHKRIARMQLRLCITTKRPSITLGNTTSNTLTAGNIN FPATLLLRKMERPSFEGLPCNNRLIASHYIRQPPRIICRLIFGDLVCEILFLK" CDS 3718..4608 /inference="protein motif:CDD:222782" /codon_start=1 /transl_table=11 /product="putative replication initiation protein" /protein_id="AXH76063.1" /translation="MACYKPIVAWKPLEGGALHFSEKKGCREINIACGQCIGCRIAKR DAWAFRCYAESKLHSRNAFVTFTYDDAHLPQYGSLQYRDIQLLHKRMRQKFGPFRFFV CGEYGDKADRPHYHALYFGLSFPDAVKSNSMYAKCDLFQSEMLSDCWGKGQVSIGEVT YESARYCAVYTTKKVSGDLAESHYSRVSPVTGEIYQLEPEFARMSLKPGIGYDWLIKY APEVLTWGGCHVNNRIQSIPTFFKDKLELLHDDDFQAMKMRLESKVDYSNNSPSRLAV REECAIAKQRFNSERNPNAL" CDS 4598..4855 /inference="protein motif:CDD:222780" /codon_start=1 /transl_table=11 /product="nonstructural protein" /protein_id="AXH76064.1" /translation="MRYKMVVVRDRAADVYNQPAFVPSLGIAIRSFADEVNRVDVNNQ LNKHPEDFDLFYLGEYDDNSGEFDAVRPQQIAVGKDVVIKS" ORIGIN 1 atgcatcgta atcagtcagt gcaggcccat aattttgcga tggtgcctcg ttcggatgtt 61 ccgcgttctg gtttcaagat tgagaatgct tataagacta cgtttaatgg tggcattctt 121 gttccagtgt attgtgaaga agtgttgccg ggtgatacgt ttaaccttaa ggcaactatg 181 ttcgctcgtt tggctactcc tattgttcct gtcatggaca atttgtattt ggagtctttc 241 ttctttttcg tcccgaatcg tttagtgtgg gataattgga agcggttttg cggtgagcag 301 gacacgcctg gagctactgt agattacgtg gttcctaaga ttggtgtgaa ttctagtcat 361 gtgcagccgg ggactattta tgattatttc ggtattcccg gcgcgggtca gttgaccggt 421 ggtctagcga ttaatgctct gccgtttcgg gcatataatt tgatttggaa tgagtggttt 481 cgtgatgaga acctacaggt tccgctgacg gttaataaga ctgattcgga tgttccgggt 541 aattatcagt tgcgtcggcg cggtaagcgt catgattatt ttacttcgtg tttgccgtgg 601 gttcagaagg gtaacagtgt tacgttgcct ttgggcactt ctgctccggt taagacttct 661 agtactggtc aggtgagtgg tcctcgtagt ggtttgagtt tccttaatgc tactactggt 721 aatgcgatta ctaatagtgg tgattttggt atcgacgtta atagttcgat ggtgtataat 781 gcgtccggta ttactggcgc gattggtggt gtttatccca ataacttgta tgctgatctt 841 tctgctgcta cggctgcaac gattaatcag attcggcagg cgtttcagat tcagaaattg 901 cttgagcgtg atgcgcgagg tggtactcgt tatactgagt tggtcaagtc gcattttggc 961 gtgacttcgc ctgatgcgcg tttgcagcgt cctgagtatc tcggtggtgg tatgacgccg 1021 attaatattc agccgattgc gcagactcag gcgactgctg cggatggtac tcctcttggt 1081 gcgttggctg cgtatggtac tgcgttggct cataatcatg gttttactca gtcgtttact 1141 gagcatggtc atgtgatagg tttgatttcg gttcgtgctg atttgaatta tcagcagggc 1201 tgtaatcgta tgtggttccg taagactcgt tatgattatt attggccggt atttgctatg 1261 ctcggtgagc aggccgtgct taatcaggag atttattgca ctggtactgc tacggatgag 1321 caggtttttg gttatcagga gcgttgggct gagtaccgtt ataagccgtc gcttattact 1381 ggtcatttga agtctacgca tcctcagcct ttggatattt ggcatttggc gcagaaattt 1441 actgcgcttc ctacgctgaa tgattcgttt attcaggatg ctcctccgat cgatcgtatt 1501 attgcgacta ctgagcagac tggtcagcag tttgtattgg attgtttttt ccggaataag 1561 gctgcgcgtc cgctgccgat gtacagtgtt cctggccttg tggatcactt ctaatgatcg 1621 gtttagctgc tgctacgtta ggttccgccg cgattggtgc ggcgggttcg ttgttttctg 1681 gtaagcagag tgctgatttt gcggagagtt cttataagca tcgttatcag tggcaggtta 1741 aggatttgca gaaagctggt ttgaatccta tgcttgccgt gcagcagggt gcccctaatg 1801 tgcctcagcc gaattttgag aatatcggtg agggtgcggt taagggtgct gctgtaggtg 1861 ttaatgctgc gcttcaaaaa gcgcagatgg ctaatgttgc tgctgatacg cagttaaagg 1921 gttctgcgac tgcgttgaat gttgcttctg ctagggagtc cgctattcgt gcgggtattc 1981 aagaggcttc gttgcctttt gcggctcaga atgctgaggt tggtgctttg agtgctgatc 2041 gtagttttca gataatgggt cgtcagctgg agaagttagg ttttgaggtt ggttctgcta 2101 ggttgtctct tgagcaacaa gagaagatga atcctattct gttggagggt cagcgtctta 2161 ttaatagagg catggatgct gatttagttc gcaaggaagt ttacggccgt ttgtggtcga 2221 ttgtgccgga taagtctacg attgataagg cttgggagat tatttccaat cctcaggatt 2281 ggtcgaagaa tatttcggat tggggtaagc gtcatgcgcc ccgctgagtt ggtgcatata 2341 ctagagggtt ttgatatgtc tactaagaag tgtgtttttc cgcgtgttct gtcgggtttg 2401 aattatgacc gtgcggcttg gtcggatatg catggtttgg aatgtaagga cccttcgctg 2461 gctgttcagt cgcagaagga tgaggcggat attaatacga ttgttcggaa tttcggtgtg 2521 actggtcagt tgccccaggg tgtaaggatt ccgtcttatg gtgattttga ttccgttgat 2581 gattatcgca ctgctattga tgccgtgcgt gctgctgagg ctagtttttt ggctatgccg 2641 tctgatcttc gtgctcgtct tgggcacgat cctgctcgtt ttgttgaatg gtgtgctgat 2701 gtaggtaatc tggaggaaat gagaaagcta gggttggctg ttcctgctcc ggtttctgat 2761 tccggcgcga gcgcgtagcg cgagctttta aaattttttt ttgcaccggg aggtgtggtt 2821 tttttacaac gggtccccgg gggatgctag ctcccccggg gattttgttt tagtaggtgg 2881 ttacttttcc cattttcgaa tttcggtgct tagtgccagc cagtctgtct gttgcttctt 2941 gctttgcttt ttccggcgtt tctgcttcga tgacaattgc gccggttcta atgaatcctt 3001 catcggtaag gtaggtgtat ccgaccttgt aaagagtctt agttgcttcg gtgttggtcg 3061 tttcattgct cttagccatt tttagggtcc tcggttgttt cggttgcttt gtctatccaa 3121 gcttccagct gttgctttac ttggatgtat tcatcgtact cgatttttgc gttaagcgca 3181 agcttcgcta gttggtctat atggtagtgc catgctctct tgtatgtgtc tgggtttatg 3241 tctttcatgt gtactccttg ttggtacggc tattatatta cttgtttatc ttgttttttt 3301 ctaatgccgt ttcgttctat cgttatatct atttgttatt tgcttttttg tattaccggt 3361 gggtggttcc gtttaatccg gaccgtggcc ccccgttccc cctcgtagac cgccgtcagg 3421 cgtcctagga tcgcccctgc ggggcgatcg agcgtcagcc tggctgacgc gtcccccctc 3481 tgaacagtcc tgctacttga tatggactgt tctaggtgac acaatccttt tggatcgtgt 3541 ccccgggggc gttgcggggg tgtcccccgc cccataaatt cttttctgga ggttttttat 3601 gtctaagcgt tatggtgtta ataagcgtag ttccgcccat cattttaaga ataatatttc 3661 gcatactaag tcgccgaata tcaatcggca aattatgcgt ggtggttggc ggatgtaatg 3721 gcttgctata agcctattgt tgcatggaag cccctcgaag gaggggcgct ccatttttct 3781 gagaagaagg gttgcaggga aattaatatt gcctgcggtc agtgtattgg atgtcgtatt 3841 gccaagcgtg atgcttgggc gtttcgttgt tatgcagagt ctaagttgca ttctcgcaat 3901 gcgtttgtga cgtttactta cgatgatgct catttacctc agtatggctc gttgcagtat 3961 cgtgatattc agttgcttca taagcgtatg cgtcagaagt tcggcccttt tcgtttcttt 4021 gtttgcggag agtatggtga taaagctgat cgaccgcact atcatgcgtt gtattttggt 4081 ctgtcttttc ccgatgctgt taagtctaac agcatgtacg ccaagtgtga tcttttccaa 4141 tccgagatgc tcagtgattg ttggggaaaa ggacaagtta gtatcggaga agttacgtat 4201 gagtccgcaa gatactgtgc agtctatacc acgaagaaag tgagtggtga tttggcggag 4261 tctcattatt ctcgtgtttc tccggtgact ggtgagattt atcagttaga gcctgaattt 4321 gctcgtatgt ctttaaagcc gggtatcggc tatgattggt tgattaagta tgctccggag 4381 gtgttgacgt ggggcggttg tcatgttaat aaccgtattc agtctattcc cacgtttttc 4441 aaggataagc tagagttgtt gcatgatgat gattttcaag ccatgaagat gcgcttggag 4501 tctaaagttg attactctaa taattcgccc tcacgtttag ctgttcgtga ggagtgtgcg 4561 attgctaaac agcgtttcaa tagtgagaga aatcccaatg cgttataaga tggtggttgt 4621 tcgtgatcgt gctgctgatg tgtataatca gccggctttt gttccttcgc ttggtattgc 4681 tattcgtagt ttcgcggatg aagttaaccg cgttgatgtt aataatcagt tgaataagca 4741 ccctgaagat ttcgacctgt tttatctcgg tgagtatgac gataattctg gtgagtttga 4801 tgctgttcgt ccgcaacaga ttgcggtcgg taaggatgtt gtgattaagt cttaattgtc 4861 gggtgcttgg gtaggttgtg agcctaccct tttttttatc taggagttgt t //