AAX08_00005 PF00308 Bacterial dnaA protein AAX08_00005 PF08299 Bacterial dnaA protein helix-turn-helix AAX08_00005 PF11638 DnaA N-terminal domain AAX08_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AAX08_00010 PF02767 DNA polymerase III beta subunit, central domain AAX08_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AAX08_00015 PF02463 RecF/RecN/SMC N terminal domain AAX08_00020 PF00204 DNA gyrase B AAX08_00020 PF00986 DNA gyrase B subunit, carboxyl terminus AAX08_00020 PF01751 Toprim domain AAX08_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_00025 PF00117 Glutamine amidotransferase class-I AAX08_00025 PF00958 GMP synthase C terminal domain AAX08_00025 PF02540 NAD synthase AAX08_00030 PF09832 Uncharacterized protein conserved in bacteria (DUF2059) AAX08_00035 PF01042 Endoribonuclease L-PSP AAX08_00040 PF01266 FAD dependent oxidoreductase AAX08_00045 PF01964 ThiC family AAX08_00045 PF13667 ThiC-associated domain AAX08_00050 PF00005 ABC transporter AAX08_00050 PF00664 ABC transporter transmembrane region AAX08_00055 PF01327 Polypeptide deformylase AAX08_00060 PF00475 Imidazoleglycerol-phosphate dehydratase AAX08_00065 PF00117 Glutamine amidotransferase class-I AAX08_00070 PF00109 Beta-ketoacyl synthase, N-terminal domain AAX08_00070 PF02801 Beta-ketoacyl synthase, C-terminal domain AAX08_00080 PF03702 Uncharacterised protein family (UPF0075) AAX08_00120 PF01521 Iron-sulphur cluster biosynthesis AAX08_00125 PF00005 ABC transporter AAX08_00125 PF12848 ABC transporter AAX08_00130 PF00226 DnaJ domain AAX08_00135 PF00561 alpha/beta hydrolase fold AAX08_00140 PF00149 Calcineurin-like phosphoesterase AAX08_00145 PF01113 Dihydrodipicolinate reductase, N-terminus AAX08_00145 PF05173 Dihydrodipicolinate reductase, C-terminus AAX08_00150 PF00226 DnaJ domain AAX08_00150 PF00684 DnaJ central domain AAX08_00150 PF01556 DnaJ C terminal domain AAX08_00155 PF11159 AAX08_00155 AAX08_00160 PF13098 Thioredoxin-like domain AAX08_00165 PF00849 RNA pseudouridylate synthase AAX08_00165 PF01479 S4 domain AAX08_00170 PF01205 Uncharacterized protein family UPF0029 AAX08_00170 PF09186 Domain of unknown function (DUF1949) AAX08_00175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AAX08_00180 PF00296 Luciferase-like monooxygenase AAX08_00185 PF08222 CodY helix-turn-helix domain AAX08_00190 PF00849 RNA pseudouridylate synthase AAX08_00195 PF03737 Demethylmenaquinone methyltransferase AAX08_00200 PF00375 Sodium:dicarboxylate symporter family AAX08_00210 PF01930 Domain of unknown function DUF83 AAX08_00215 PF01867 CRISPR associated protein Cas1 AAX08_00220 PF09827 CRISPR associated protein Cas2 AAX08_00225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_00225 PF03466 LysR substrate binding domain AAX08_00230 PF00155 Aminotransferase class I and II AAX08_00235 PF00883 Cytosol aminopeptidase family, catalytic domain AAX08_00235 PF02789 Cytosol aminopeptidase family, N-terminal domain AAX08_00240 PF03739 AAX08_00240 AAX08_00245 PF03739 AAX08_00245 AAX08_00250 PF00072 Response regulator receiver domain AAX08_00250 PF00486 Transcriptional regulatory protein, C terminal AAX08_00255 PF00575 S1 RNA binding domain AAX08_00255 PF09371 Tex-like protein N-terminal domain AAX08_00255 PF12836 Helix-hairpin-helix motif AAX08_00255 PF16921 AAX08_00255 AAX08_00260 PF00285 Citrate synthase AAX08_00265 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AAX08_00270 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AAX08_00275 PF00890 FAD binding domain AAX08_00275 PF02910 Fumarate reductase flavoprotein C-term AAX08_00280 PF13085 2Fe-2S iron-sulfur cluster binding domain AAX08_00280 PF13534 4Fe-4S dicluster domain AAX08_00330 PF03412 Peptidase C39 family AAX08_00335 PF00676 Dehydrogenase E1 component AAX08_00335 PF02779 Transketolase, pyrimidine binding domain AAX08_00335 PF16078 AAX08_00335 AAX08_00335 PF16870 AAX08_00335 AAX08_00340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AAX08_00340 PF00364 Biotin-requiring enzyme AAX08_00340 PF02817 e3 binding domain AAX08_00345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AAX08_00345 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_00350 PF03895 YadA-like C-terminal region AAX08_00360 PF00483 Nucleotidyl transferase AAX08_00365 PF00342 Phosphoglucose isomerase AAX08_00370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AAX08_00380 PF01435 Peptidase family M48 AAX08_00385 PF05987 AAX08_00385 AAX08_00390 PF01725 Ham1 family AAX08_00395 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AAX08_00395 PF05697 Bacterial trigger factor protein (TF) AAX08_00395 PF05698 Bacterial trigger factor protein (TF) C-terminus AAX08_00400 PF00574 Clp protease AAX08_00405 PF06689 ClpX C4-type zinc finger AAX08_00405 PF07724 AAA domain (Cdc48 subfamily) AAX08_00405 PF10431 C-terminal, D2-small domain, of ClpB protein AAX08_00410 PF00378 Enoyl-CoA hydratase/isomerase family AAX08_00410 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AAX08_00410 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AAX08_00415 PF00108 Thiolase, N-terminal domain AAX08_00415 PF02803 Thiolase, C-terminal domain AAX08_00425 PF01497 Periplasmic binding protein AAX08_00435 PF01032 FecCD transport family AAX08_00440 PF01032 FecCD transport family AAX08_00445 PF02517 CAAX protease self-immunity AAX08_00450 PF00005 ABC transporter AAX08_00455 PF00474 Sodium:solute symporter family AAX08_00460 PF06196 AAX08_00460 AAX08_00465 PF00881 Nitroreductase family AAX08_00470 PF01814 Hemerythrin HHE cation binding domain AAX08_00475 PF00444 Ribosomal protein L36 AAX08_00480 PF01207 Dihydrouridine synthase (Dus) AAX08_00485 PF13245 Part of AAA domain AAX08_00485 PF13361 UvrD-like helicase C-terminal domain AAX08_00490 PF00902 Sec-independent protein translocase protein (TatC) AAX08_00495 PF02416 mttA/Hcf106 family AAX08_00500 PF02416 mttA/Hcf106 family AAX08_00505 PF01502 Phosphoribosyl-AMP cyclohydrolase AAX08_00505 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AAX08_00515 PF01632 Ribosomal protein L35 AAX08_00520 PF00453 Ribosomal protein L20 AAX08_00525 PF13609 Gram-negative porin AAX08_00530 PF01409 tRNA synthetases class II core domain (F) AAX08_00530 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AAX08_00535 PF01588 Putative tRNA binding domain AAX08_00535 PF03147 Ferredoxin-fold anticodon binding domain AAX08_00535 PF03483 B3/4 domain AAX08_00535 PF03484 tRNA synthetase B5 domain AAX08_00540 PF00216 Bacterial DNA-binding protein AAX08_00545 PF01197 Ribosomal protein L31 AAX08_00550 PF04354 ZipA, C-terminal FtsZ-binding domain AAX08_00555 PF00533 BRCA1 C Terminus (BRCT) domain AAX08_00555 PF01653 NAD-dependent DNA ligase adenylation domain AAX08_00555 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AAX08_00555 PF03120 NAD-dependent DNA ligase OB-fold domain AAX08_00555 PF12826 Helix-hairpin-helix motif AAX08_00570 PF01037 AsnC family AAX08_00570 PF13412 Winged helix-turn-helix DNA-binding AAX08_00575 PF00892 EamA-like transporter family AAX08_00580 PF01668 SmpB protein AAX08_00585 PF00881 Nitroreductase family AAX08_00590 PF00005 ABC transporter AAX08_00595 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_00600 PF09084 NMT1/THI5 like AAX08_00605 PF01467 Cytidylyltransferase AAX08_00610 PF00037 4Fe-4S binding domain AAX08_00645 PF01061 AAX08_00645 AAX08_00660 PF02563 Polysaccharide biosynthesis/export protein AAX08_00670 PF00009 Elongation factor Tu GTP binding domain AAX08_00670 PF00679 Elongation factor G C-terminus AAX08_00670 PF03144 Elongation factor Tu domain 2 AAX08_00670 PF06421 GTP-binding protein LepA C-terminus AAX08_00675 PF00717 Peptidase S24-like AAX08_00675 PF10502 Signal peptidase, peptidase S26 AAX08_00680 PF00035 Double-stranded RNA binding motif AAX08_00680 PF14622 Ribonuclease-III-like AAX08_00685 PF01926 50S ribosome-binding GTPase AAX08_00685 PF07650 KH domain AAX08_00690 PF02565 Recombination protein O C terminal AAX08_00690 PF11967 Recombination protein O N terminal AAX08_00695 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AAX08_00700 PF00691 OmpA family AAX08_00700 PF13505 Outer membrane protein beta-barrel domain AAX08_00705 PF00009 Elongation factor Tu GTP binding domain AAX08_00705 PF00679 Elongation factor G C-terminus AAX08_00705 PF03144 Elongation factor Tu domain 2 AAX08_00715 PF06291 AAX08_00715 AAX08_00720 PF06291 AAX08_00720 AAX08_00725 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AAX08_00725 PF06827 Zinc finger found in FPG and IleRS AAX08_00725 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AAX08_00730 PF02824 TGS domain AAX08_00730 PF04607 Region found in RelA / SpoT proteins AAX08_00730 PF13291 ACT domain AAX08_00730 PF13328 HD domain AAX08_00735 PF00270 DEAD/DEAH box helicase AAX08_00735 PF00271 Helicase conserved C-terminal domain AAX08_00745 PF04304 AAX08_00745 AAX08_00750 PF14681 Uracil phosphoribosyltransferase AAX08_00755 PF13303 AAX08_00755 AAX08_00760 PF00132 Bacterial transferase hexapeptide (six repeats) AAX08_00760 PF12804 MobA-like NTP transferase domain AAX08_00760 PF14602 Hexapeptide repeat of succinyl-transferase AAX08_00770 PF04608 Phosphatidylglycerophosphatase A AAX08_00780 PF00586 AIR synthase related protein, N-terminal domain AAX08_00785 PF01029 NusB family AAX08_00790 PF00885 6,7-dimethyl-8-ribityllumazine synthase AAX08_00795 PF00977 Histidine biosynthesis protein AAX08_00805 PF01636 Phosphotransferase enzyme family AAX08_00810 PF13230 Glutamine amidotransferases class-II AAX08_00815 PF13489 Methyltransferase domain AAX08_00820 PF00155 Aminotransferase class I and II AAX08_00830 PF00756 Putative esterase AAX08_00845 PF00561 alpha/beta hydrolase fold AAX08_00850 PF00183 Hsp90 protein AAX08_00850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_00855 PF11227 AAX08_00855 AAX08_00870 PF01565 FAD binding domain AAX08_00870 PF02913 FAD linked oxidases, C-terminal domain AAX08_00885 PF00749 tRNA synthetases class I (E and Q), catalytic domain AAX08_00890 PF01795 MraW methylase family AAX08_00895 PF04999 AAX08_00895 AAX08_00900 PF00905 Penicillin binding protein transpeptidase domain AAX08_00900 PF03717 Penicillin-binding Protein dimerisation domain AAX08_00905 PF02875 Mur ligase family, glutamate ligase domain AAX08_00905 PF08245 Mur ligase middle domain AAX08_00910 PF01225 Mur ligase family, catalytic domain AAX08_00910 PF02875 Mur ligase family, glutamate ligase domain AAX08_00910 PF08245 Mur ligase middle domain AAX08_00915 PF00953 Glycosyl transferase family 4 AAX08_00915 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AAX08_00920 PF00378 Enoyl-CoA hydratase/isomerase family AAX08_00925 PF07690 Major Facilitator Superfamily AAX08_00930 PF02590 Predicted SPOUT methyltransferase AAX08_00935 PF06271 AAX08_00935 AAX08_00940 PF02021 Uncharacterised protein family UPF0102 AAX08_00945 PF04972 BON domain AAX08_00950 PF01722 BolA-like protein AAX08_00955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AAX08_00960 PF01634 ATP phosphoribosyltransferase AAX08_00965 PF00815 Histidinol dehydrogenase AAX08_00970 PF00155 Aminotransferase class I and II AAX08_00975 PF05681 AAX08_00975 AAX08_00975 PF05683 Fumarase C-terminus AAX08_00980 PF00575 S1 RNA binding domain AAX08_00980 PF10150 Ribonuclease E/G family AAX08_00985 PF00849 RNA pseudouridylate synthase AAX08_00985 PF01479 S4 domain AAX08_00990 PF02541 Ppx/GppA phosphatase family AAX08_00995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AAX08_01000 PF01171 PP-loop family AAX08_01000 PF09179 TilS substrate binding domain AAX08_01005 PF03807 NADP oxidoreductase coenzyme F420-dependent AAX08_01005 PF14748 Pyrroline-5-carboxylate reductase dimerisation AAX08_01010 PF02325 AAX08_01010 AAX08_01015 PF08543 Phosphomethylpyrimidine kinase AAX08_01030 PF06271 AAX08_01030 AAX08_01035 PF04055 Radical SAM superfamily AAX08_01035 PF06969 HemN C-terminal domain AAX08_01040 PF01699 Sodium/calcium exchanger protein AAX08_01045 PF01195 Peptidyl-tRNA hydrolase AAX08_01050 PF01386 Ribosomal L25p family AAX08_01050 PF14693 Ribosomal protein TL5, C-terminal domain AAX08_01055 PF00474 Sodium:solute symporter family AAX08_01060 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AAX08_01060 PF14572 Phosphoribosyl synthetase-associated domain AAX08_01075 PF00288 GHMP kinases N terminal domain AAX08_01080 PF03550 Outer membrane lipoprotein LolB AAX08_01085 PF13432 Tetratricopeptide repeat AAX08_01090 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AAX08_01090 PF01488 Shikimate / quinate 5-dehydrogenase AAX08_01090 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AAX08_01095 PF00266 Aminotransferase class-V AAX08_01100 PF01966 HD domain AAX08_01100 PF08335 GlnD PII-uridylyltransferase AAX08_01105 PF14903 AAX08_01105 AAX08_01110 PF00589 Phage integrase family AAX08_01110 PF13356 Domain of unknown function (DUF4102) AAX08_01110 PF14659 Phage integrase, N-terminal SAM-like domain AAX08_01135 PF13481 AAA domain AAX08_01155 PF04466 Phage terminase large subunit AAX08_01165 PF09335 AAX08_01165 AAX08_01180 PF13395 HNH endonuclease AAX08_01185 PF13489 Methyltransferase domain AAX08_01190 PF00557 Metallopeptidase family M24 AAX08_01195 PF04273 Putative phosphatase (DUF442) AAX08_01200 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AAX08_01200 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_01205 PF08212 Lipocalin-like domain AAX08_01210 PF00464 Serine hydroxymethyltransferase AAX08_01215 PF04345 Chorismate lyase AAX08_01220 PF00463 Isocitrate lyase family AAX08_01225 PF01274 Malate synthase AAX08_01235 PF01368 DHH family AAX08_01235 PF02833 DHHA2 domain AAX08_01240 PF00933 Glycosyl hydrolase family 3 N terminal domain AAX08_01245 PF00595 PDZ domain (Also known as DHR or GLGF) AAX08_01245 PF03572 Peptidase family S41 AAX08_01245 PF11818 AAX08_01245 AAX08_01250 PF00512 His Kinase A (phospho-acceptor) domain AAX08_01250 PF00672 HAMP domain AAX08_01250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_01255 PF00072 Response regulator receiver domain AAX08_01255 PF00486 Transcriptional regulatory protein, C terminal AAX08_01260 PF13437 HlyD family secretion protein AAX08_01260 PF13533 Biotin-lipoyl like AAX08_01265 PF01292 Prokaryotic cytochrome b561 AAX08_01270 PF03776 Septum formation topological specificity factor MinE AAX08_01275 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AAX08_01280 PF03775 Septum formation inhibitor MinC, C-terminal domain AAX08_01280 PF05209 Septum formation inhibitor MinC, N-terminal domain AAX08_01290 PF01553 Acyltransferase AAX08_01295 PF00691 OmpA family AAX08_01295 PF13441 AAX08_01295 AAX08_01300 PF01863 Protein of unknown function DUF45 AAX08_01305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_01305 PF03466 LysR substrate binding domain AAX08_01310 PF00578 AhpC/TSA family AAX08_01310 PF10417 C-terminal domain of 1-Cys peroxiredoxin AAX08_01315 PF04325 Protein of unknown function (DUF465) AAX08_01320 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_01320 PF13192 Thioredoxin domain AAX08_01325 PF04657 AAX08_01325 AAX08_01330 PF00266 Aminotransferase class-V AAX08_01335 PF10014 2OG-Fe dioxygenase AAX08_01340 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase AAX08_01340 PF13450 NAD(P)-binding Rossmann-like domain AAX08_01345 PF06938 Protein of unknown function (DUF1285) AAX08_01350 PF01177 Asp/Glu/Hydantoin racemase AAX08_01360 PF01471 Putative peptidoglycan binding domain AAX08_01360 PF13406 Transglycosylase SLT domain AAX08_01365 PF01554 MatE AAX08_01370 PF04055 Radical SAM superfamily AAX08_01370 PF06463 Molybdenum Cofactor Synthesis C AAX08_01370 PF13353 4Fe-4S single cluster domain AAX08_01375 PF03473 MOSC domain AAX08_01380 PF00994 Probable molybdopterin binding domain AAX08_01385 PF12804 MobA-like NTP transferase domain AAX08_01390 PF01967 MoaC family AAX08_01395 PF02597 ThiS family AAX08_01400 PF02391 MoaE protein AAX08_01405 PF13531 Bacterial extracellular solute-binding protein AAX08_01410 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_01415 PF00005 ABC transporter AAX08_01420 PF00484 Carbonic anhydrase AAX08_01425 PF13545 Crp-like helix-turn-helix domain AAX08_01430 PF00072 Response regulator receiver domain AAX08_01430 PF00196 Bacterial regulatory proteins, luxR family AAX08_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_01435 PF07730 Histidine kinase AAX08_01435 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AAX08_01440 PF07690 Major Facilitator Superfamily AAX08_01445 PF07690 Major Facilitator Superfamily AAX08_01455 PF03738 Glutathionylspermidine synthase preATP-grasp AAX08_01465 PF01578 AAX08_01465 AAX08_01470 PF04995 AAX08_01470 AAX08_01475 PF03100 CcmE AAX08_01480 PF03180 NLPA lipoprotein AAX08_01485 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_01490 PF00005 ABC transporter AAX08_01490 PF09383 NIL domain AAX08_01495 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AAX08_01495 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AAX08_01500 PF00176 SNF2 family N-terminal domain AAX08_01500 PF00271 Helicase conserved C-terminal domain AAX08_01500 PF12137 RNA polymerase recycling family C-terminal AAX08_01505 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase AAX08_01510 PF01078 Magnesium chelatase, subunit ChlI AAX08_01510 PF13335 AAX08_01510 AAX08_01510 PF13541 Subunit ChlI of Mg-chelatase AAX08_01515 PF13419 Haloacid dehalogenase-like hydrolase AAX08_01520 PF13505 Outer membrane protein beta-barrel domain AAX08_01530 PF00348 Polyprenyl synthetase AAX08_01535 PF00633 Helix-hairpin-helix motif AAX08_01535 PF00730 HhH-GPD superfamily base excision DNA repair protein AAX08_01535 PF14815 NUDIX domain AAX08_01540 PF01223 DNA/RNA non-specific endonuclease AAX08_01550 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) AAX08_01555 PF00543 Nitrogen regulatory protein P-II AAX08_01560 PF02875 Mur ligase family, glutamate ligase domain AAX08_01560 PF08245 Mur ligase middle domain AAX08_01565 PF01098 AAX08_01565 AAX08_01570 PF00749 tRNA synthetases class I (E and Q), catalytic domain AAX08_01575 PF01258 Prokaryotic dksA/traR C4-type zinc finger AAX08_01580 PF00149 Calcineurin-like phosphoesterase AAX08_01585 PF00950 AAX08_01585 AAX08_01590 PF00005 ABC transporter AAX08_01595 PF01475 Ferric uptake regulator family AAX08_01600 PF01297 Periplasmic solute binding protein family AAX08_01605 PF03899 AAX08_01605 AAX08_01610 PF00119 ATP synthase A chain AAX08_01615 PF00137 ATP synthase subunit C AAX08_01620 PF00430 ATP synthase B/B' CF(0) AAX08_01625 PF00213 ATP synthase delta (OSCP) subunit AAX08_01630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AAX08_01630 PF00306 ATP synthase alpha/beta chain, C terminal domain AAX08_01630 PF02874 ATP synthase alpha/beta family, beta-barrel domain AAX08_01635 PF00231 ATP synthase AAX08_01640 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AAX08_01640 PF02874 ATP synthase alpha/beta family, beta-barrel domain AAX08_01645 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AAX08_01650 PF00072 Response regulator receiver domain AAX08_01650 PF00486 Transcriptional regulatory protein, C terminal AAX08_01655 PF00512 His Kinase A (phospho-acceptor) domain AAX08_01655 PF00672 HAMP domain AAX08_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_01660 PF00512 His Kinase A (phospho-acceptor) domain AAX08_01660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_01665 PF00886 Ribosomal protein S16 AAX08_01670 PF01782 RimM N-terminal domain AAX08_01670 PF05239 PRC-barrel domain AAX08_01675 PF01746 tRNA (Guanine-1)-methyltransferase AAX08_01680 PF01245 Ribosomal protein L19 AAX08_01685 PF14539 Domain of unknown function (DUF4442) AAX08_01690 PF01541 GIY-YIG catalytic domain AAX08_01690 PF02151 UvrB/uvrC motif AAX08_01690 PF08459 UvrC Helix-hairpin-helix N-terminal AAX08_01690 PF12826 Helix-hairpin-helix motif AAX08_01695 PF02588 AAX08_01695 AAX08_01700 PF01494 FAD binding domain AAX08_01710 PF02424 ApbE family AAX08_01715 PF00186 Dihydrofolate reductase AAX08_01720 PF00303 Thymidylate synthase AAX08_01725 PF01790 AAX08_01725 AAX08_01730 PF00293 NUDIX domain AAX08_01735 PF02566 OsmC-like protein AAX08_01740 PF01124 MAPEG family AAX08_01745 PF03309 Type III pantothenate kinase AAX08_01750 PF03099 Biotin/lipoate A/B protein ligase family AAX08_01755 PF01925 AAX08_01755 AAX08_01760 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AAX08_01765 PF00436 Single-strand binding protein family AAX08_01775 PF02463 RecF/RecN/SMC N terminal domain AAX08_01780 PF01625 Peptide methionine sulfoxide reductase AAX08_01785 PF13649 Methyltransferase domain AAX08_01790 PF08003 Protein of unknown function (DUF1698) AAX08_01795 PF10981 AAX08_01795 AAX08_01800 PF05036 Sporulation related domain AAX08_01805 PF05661 AAX08_01805 AAX08_01815 PF01165 Ribosomal protein S21 AAX08_01855 PF00111 2Fe-2S iron-sulfur cluster binding domain AAX08_01855 PF00175 Oxidoreductase NAD-binding domain AAX08_01855 PF00970 Oxidoreductase FAD-binding domain AAX08_01860 PF02508 AAX08_01860 AAX08_01865 PF02508 AAX08_01865 AAX08_01870 PF04205 FMN-binding domain AAX08_01875 PF03116 AAX08_01875 AAX08_01880 PF05896 AAX08_01880 AAX08_01880 PF11973 AAX08_01880 AAX08_01885 PF00977 Histidine biosynthesis protein AAX08_01895 PF00575 S1 RNA binding domain AAX08_01895 PF00773 RNB domain AAX08_01895 PF08206 Ribonuclease B OB domain AAX08_01900 PF00583 Acetyltransferase (GNAT) family AAX08_01910 PF00707 Translation initiation factor IF-3, C-terminal domain AAX08_01910 PF05198 Translation initiation factor IF-3, N-terminal domain AAX08_01915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AAX08_01915 PF02824 TGS domain AAX08_01915 PF03129 Anticodon binding domain AAX08_01915 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AAX08_01920 PF01297 Periplasmic solute binding protein family AAX08_01930 PF00950 AAX08_01930 AAX08_01935 PF00950 AAX08_01935 AAX08_01940 PF01212 Beta-eliminating lyase AAX08_01970 PF00114 Pilin (bacterial filament) AAX08_01970 PF07963 Prokaryotic N-terminal methylation motif AAX08_01975 PF00318 Ribosomal protein S2 AAX08_01980 PF00889 Elongation factor TS AAX08_01985 PF00156 Phosphoribosyl transferase domain AAX08_01990 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AAX08_01990 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AAX08_01995 PF05787 Bacterial protein of unknown function (DUF839) AAX08_02000 PF03033 Glycosyltransferase family 28 N-terminal domain AAX08_02000 PF04101 Glycosyltransferase family 28 C-terminal domain AAX08_02005 PF13302 Acetyltransferase (GNAT) domain AAX08_02015 PF01225 Mur ligase family, catalytic domain AAX08_02015 PF02875 Mur ligase family, glutamate ligase domain AAX08_02015 PF08245 Mur ligase middle domain AAX08_02020 PF01820 D-ala D-ala ligase N-terminus AAX08_02020 PF07478 D-ala D-ala ligase C-terminus AAX08_02025 PF00091 Tubulin/FtsZ family, GTPase domain AAX08_02055 PF12327 FtsZ family, C-terminal domain AAX08_02060 PF00326 Prolyl oligopeptidase family AAX08_02060 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AAX08_02085 PF03799 Cell division protein FtsQ AAX08_02090 PF14450 Cell division protein FtsA AAX08_02095 PF00091 Tubulin/FtsZ family, GTPase domain AAX08_02095 PF12327 FtsZ family, C-terminal domain AAX08_02100 PF02811 PHP domain AAX08_02105 PF02631 RecX family AAX08_02110 PF00154 recA bacterial DNA recombination protein AAX08_02115 PF02390 Putative methyltransferase AAX08_02120 PF00114 Pilin (bacterial filament) AAX08_02120 PF10947 AAX08_02120 AAX08_02125 PF05857 AAX08_02125 AAX08_02130 PF00271 Helicase conserved C-terminal domain AAX08_02130 PF04851 Type III restriction enzyme, res subunit AAX08_02135 PF01042 Endoribonuclease L-PSP AAX08_02145 PF02824 TGS domain AAX08_02145 PF13328 HD domain AAX08_02150 PF01192 RNA polymerase Rpb6 AAX08_02155 PF04055 Radical SAM superfamily AAX08_02155 PF13394 4Fe-4S single cluster domain AAX08_02160 PF00132 Bacterial transferase hexapeptide (six repeats) AAX08_02160 PF14602 Hexapeptide repeat of succinyl-transferase AAX08_02160 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AAX08_02165 PF12146 Putative lysophospholipase AAX08_02175 PF00364 Biotin-requiring enzyme AAX08_02180 PF01566 AAX08_02180 AAX08_02185 PF03746 LamB/YcsF family AAX08_02190 PF02626 Allophanate hydrolase subunit 2 AAX08_02195 PF02682 Allophanate hydrolase subunit 1 AAX08_02200 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AAX08_02200 PF02785 Biotin carboxylase C-terminal domain AAX08_02200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AAX08_02205 PF00364 Biotin-requiring enzyme AAX08_02210 PF04055 Radical SAM superfamily AAX08_02220 PF09623 AAX08_02220 AAX08_02225 PF03787 RAMP superfamily AAX08_02230 PF12469 CRISPR-associated protein AAX08_02235 PF09700 CRISPR-associated protein (Cas_Cmr3) AAX08_02240 PF03787 RAMP superfamily AAX08_02245 PF09701 CRISPR-associated protein (Cas_Cmr5) AAX08_02250 PF03787 RAMP superfamily AAX08_02255 PF09455 CRISPR-associated (Cas) DxTHG family AAX08_02260 PF09652 AAX08_02260 AAX08_02275 PF00106 short chain dehydrogenase AAX08_02280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AAX08_02285 PF10040 Uncharacterized conserved protein (DUF2276) AAX08_02295 PF13532 2OG-Fe(II) oxygenase superfamily AAX08_02300 PF09827 CRISPR associated protein Cas2 AAX08_02305 PF01867 CRISPR associated protein Cas1 AAX08_02310 PF00330 Aconitase family (aconitate hydratase) AAX08_02310 PF06434 Aconitate hydratase 2 N-terminus AAX08_02310 PF11791 Aconitate B N-terminal domain AAX08_02315 PF00202 Aminotransferase class-III AAX08_02320 PF01555 DNA methylase AAX08_02325 PF04851 Type III restriction enzyme, res subunit AAX08_02330 PF00282 Pyridoxal-dependent decarboxylase conserved domain AAX08_02335 PF01904 Protein of unknown function DUF72 AAX08_02340 PF08238 Sel1 repeat AAX08_02345 PF07021 Methionine biosynthesis protein MetW AAX08_02350 PF00561 alpha/beta hydrolase fold AAX08_02355 PF00005 ABC transporter AAX08_02360 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_02365 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_02375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AAX08_02380 PF00762 Ferrochelatase AAX08_02385 PF03458 AAX08_02385 AAX08_02390 PF13536 Multidrug resistance efflux transporter AAX08_02395 PF00625 Guanylate kinase AAX08_02400 PF00578 AhpC/TSA family AAX08_02405 PF03971 Monomeric isocitrate dehydrogenase AAX08_02410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_02410 PF03466 LysR substrate binding domain AAX08_02415 PF10973 AAX08_02415 AAX08_02420 PF13520 Amino acid permease AAX08_02425 PF13561 Enoyl-(Acyl carrier protein) reductase AAX08_02430 PF01743 Poly A polymerase head domain AAX08_02430 PF12627 Probable RNA and SrmB- binding site of polymerase A AAX08_02435 PF00390 Malic enzyme, N-terminal domain AAX08_02435 PF01515 Phosphate acetyl/butaryl transferase AAX08_02435 PF03949 Malic enzyme, NAD binding domain AAX08_02440 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AAX08_02445 PF00490 Delta-aminolevulinic acid dehydratase AAX08_02455 PF05491 Holliday junction DNA helicase ruvB C-terminus AAX08_02455 PF05496 Holliday junction DNA helicase ruvB N-terminus AAX08_02460 PF11948 AAX08_02460 AAX08_02465 PF02253 Phospholipase A1 AAX08_02475 PF07963 Prokaryotic N-terminal methylation motif AAX08_02480 PF07963 Prokaryotic N-terminal methylation motif AAX08_02490 PF05567 Neisseria PilC beta-propeller domain AAX08_02500 PF00691 OmpA family AAX08_02505 PF01433 Peptidase family M1 AAX08_02505 PF11940 Domain of unknown function (DUF3458) AAX08_02505 PF17432 AAX08_02505 AAX08_02510 PF00534 Glycosyl transferases group 1 AAX08_02510 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AAX08_02515 PF04452 RNA methyltransferase AAX08_02520 PF13847 Methyltransferase domain AAX08_02530 PF04392 ABC transporter substrate binding protein AAX08_02535 PF04392 ABC transporter substrate binding protein AAX08_02540 PF02653 AAX08_02540 AAX08_02545 PF00005 ABC transporter AAX08_02560 PF02627 Carboxymuconolactone decarboxylase family AAX08_02565 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_02565 PF02861 Clp amino terminal domain AAX08_02565 PF07724 AAA domain (Cdc48 subfamily) AAX08_02565 PF10431 C-terminal, D2-small domain, of ClpB protein AAX08_02570 PF05096 Glutamine cyclotransferase AAX08_02580 PF16242 AAX08_02580 AAX08_02590 PF00392 Bacterial regulatory proteins, gntR family AAX08_02590 PF07702 UTRA domain AAX08_02595 PF06808 AAX08_02595 AAX08_02600 PF08905 AAX08_02600 AAX08_02605 PF16868 AAX08_02605 AAX08_02610 PF05164 Cell division protein ZapA AAX08_02620 PF03695 Uncharacterised protein family (UPF0149) AAX08_02625 PF01687 Riboflavin kinase AAX08_02625 PF06574 FAD synthetase AAX08_02630 PF10982 Protein of unknown function (DUF2789) AAX08_02635 PF00919 Uncharacterized protein family UPF0004 AAX08_02635 PF01938 TRAM domain AAX08_02635 PF04055 Radical SAM superfamily AAX08_02640 PF01464 Transglycosylase SLT domain AAX08_02645 PF13091 PLD-like domain AAX08_02650 PF00056 lactate/malate dehydrogenase, NAD binding domain AAX08_02650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AAX08_02655 PF01406 tRNA synthetases class I (C) catalytic domain AAX08_02655 PF09190 DALR domain AAX08_02660 PF00742 Homoserine dehydrogenase AAX08_02660 PF01842 ACT domain AAX08_02660 PF03447 Homoserine dehydrogenase, NAD binding domain AAX08_02665 PF10411 Disulfide bond isomerase protein N-terminus AAX08_02665 PF13098 Thioredoxin-like domain AAX08_02670 PF00478 IMP dehydrogenase / GMP reductase domain AAX08_02670 PF00571 CBS domain AAX08_02680 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AAX08_02685 PF00005 ABC transporter AAX08_02690 PF01061 AAX08_02690 AAX08_02695 PF14489 QueF-like protein AAX08_02695 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AAX08_02705 PF04461 Protein of unknown function (DUF520) AAX08_02710 PF02794 AAX08_02710 AAX08_02715 PF00353 Hemolysin-type calcium-binding repeat (2 copies) AAX08_02715 PF02382 AAX08_02715 AAX08_02715 PF08339 AAX08_02715 AAX08_02720 PF00005 ABC transporter AAX08_02720 PF00664 ABC transporter transmembrane region AAX08_02720 PF03412 Peptidase C39 family AAX08_02725 PF13437 HlyD family secretion protein AAX08_02730 PF02321 Outer membrane efflux protein AAX08_02735 PF00929 Exonuclease AAX08_02740 PF01979 Amidohydrolase family AAX08_02750 PF00764 Arginosuccinate synthase AAX08_02755 PF03734 L,D-transpeptidase catalytic domain AAX08_02765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_02765 PF03466 LysR substrate binding domain AAX08_02770 PF05751 AAX08_02770 AAX08_02775 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase AAX08_02775 PF12801 AAX08_02775 AAX08_02775 PF13746 4Fe-4S dicluster domain AAX08_02780 PF05658 Head domain of trimeric autotransporter adhesin AAX08_02780 PF05662 Coiled stalk of trimeric autotransporter adhesin AAX08_02780 PF13018 AAX08_02780 AAX08_02785 PF03895 YadA-like C-terminal region AAX08_02785 PF05662 Coiled stalk of trimeric autotransporter adhesin AAX08_02790 PF00691 OmpA family AAX08_02790 PF04355 SmpA / OmlA family AAX08_02795 PF02036 SCP-2 sterol transfer family AAX08_02800 PF00115 Cytochrome C and Quinol oxidase polypeptide I AAX08_02805 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO AAX08_02810 PF05545 AAX08_02810 AAX08_02815 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AAX08_02815 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP AAX08_02825 PF02687 AAX08_02825 AAX08_02825 PF12704 MacB-like periplasmic core domain AAX08_02830 PF00005 ABC transporter AAX08_02840 PF00929 Exonuclease AAX08_02845 PF11342 Protein of unknown function (DUF3144) AAX08_02850 PF00438 S-adenosylmethionine synthetase, N-terminal domain AAX08_02850 PF02772 S-adenosylmethionine synthetase, central domain AAX08_02850 PF02773 S-adenosylmethionine synthetase, C-terminal domain AAX08_02855 PF07690 Major Facilitator Superfamily AAX08_02860 PF01494 FAD binding domain AAX08_02875 PF03193 Protein of unknown function, DUF258 AAX08_02880 PF00581 Rhodanese-like domain AAX08_02885 PF00462 Glutaredoxin AAX08_02890 PF02556 Preprotein translocase subunit SecB AAX08_02895 PF02698 DUF218 domain AAX08_02900 PF01565 FAD binding domain AAX08_02900 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AAX08_02905 PF01451 Low molecular weight phosphotyrosine protein phosphatase AAX08_02910 PF13441 AAX08_02910 AAX08_02915 PF01479 S4 domain AAX08_02920 PF04266 ASCH domain AAX08_02925 PF00750 tRNA synthetases class I (R) AAX08_02925 PF03485 Arginyl tRNA synthetase N terminal domain AAX08_02925 PF05746 DALR anticodon binding domain AAX08_02930 PF12849 PBP superfamily domain AAX08_02935 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_02940 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_02945 PF00005 ABC transporter AAX08_02950 PF00072 Response regulator receiver domain AAX08_02950 PF00486 Transcriptional regulatory protein, C terminal AAX08_02955 PF00512 His Kinase A (phospho-acceptor) domain AAX08_02955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_02955 PF11808 AAX08_02955 AAX08_02960 PF14903 AAX08_02960 AAX08_02965 PF00291 Pyridoxal-phosphate dependent enzyme AAX08_02965 PF00585 C-terminal regulatory domain of Threonine dehydratase AAX08_02970 PF01709 Transcriptional regulator AAX08_02980 PF00520 Ion transport protein AAX08_02985 PF00593 TonB dependent receptor AAX08_02985 PF07715 TonB-dependent Receptor Plug Domain AAX08_02990 PF01694 Rhomboid family AAX08_02995 PF00149 Calcineurin-like phosphoesterase AAX08_03000 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AAX08_03005 PF10030 AAX08_03005 AAX08_03010 PF00749 tRNA synthetases class I (E and Q), catalytic domain AAX08_03010 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AAX08_03015 PF02401 LytB protein AAX08_03020 PF01368 DHH family AAX08_03020 PF02272 DHHA1 domain AAX08_03055 PF00133 tRNA synthetases class I (I, L, M and V) AAX08_03055 PF08264 Anticodon-binding domain of tRNA AAX08_03055 PF09334 tRNA synthetases class I (M) AAX08_03055 PF13603 Leucyl-tRNA synthetase, Domain 2 AAX08_03060 PF03960 ArsC family AAX08_03065 PF14257 AAX08_03065 AAX08_03070 PF14257 AAX08_03070 AAX08_03075 PF00696 Amino acid kinase family AAX08_03080 PF00692 dUTPase AAX08_03085 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) AAX08_03090 PF03788 AAX08_03090 AAX08_03095 PF04172 AAX08_03095 AAX08_03100 PF01435 Peptidase family M48 AAX08_03110 PF00881 Nitroreductase family AAX08_03115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_03115 PF03466 LysR substrate binding domain AAX08_03120 PF00639 PPIC-type PPIASE domain AAX08_03120 PF09312 SurA N-terminal domain AAX08_03120 PF13616 PPIC-type PPIASE domain AAX08_03125 PF03968 OstA-like protein AAX08_03125 PF04453 Organic solvent tolerance protein AAX08_03130 PF01636 Phosphotransferase enzyme family AAX08_03135 PF00483 Nucleotidyl transferase AAX08_03155 PF00892 EamA-like transporter family AAX08_03160 PF01588 Putative tRNA binding domain AAX08_03160 PF08264 Anticodon-binding domain of tRNA AAX08_03160 PF09334 tRNA synthetases class I (M) AAX08_03165 PF04386 Stringent starvation protein B AAX08_03170 PF00043 Glutathione S-transferase, C-terminal domain AAX08_03170 PF13417 Glutathione S-transferase, N-terminal domain AAX08_03185 PF02167 Cytochrome C1 family AAX08_03190 PF00032 Cytochrome b(C-terminal)/b6/petD AAX08_03190 PF00033 Cytochrome b(N-terminal)/b6/petB AAX08_03195 PF00355 Rieske [2Fe-2S] domain AAX08_03195 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AAX08_03200 PF00380 Ribosomal protein S9/S16 AAX08_03205 PF00572 Ribosomal protein L13 AAX08_03210 PF03602 Conserved hypothetical protein 95 AAX08_03220 PF01578 AAX08_03220 AAX08_03220 PF16327 AAX08_03220 AAX08_03225 PF08534 Redoxin AAX08_03230 PF03918 Cytochrome C biogenesis protein AAX08_03240 PF00406 Adenylate kinase AAX08_03240 PF05191 Adenylate kinase, active site lid AAX08_03250 PF01230 HIT domain AAX08_03260 PF00175 Oxidoreductase NAD-binding domain AAX08_03260 PF00970 Oxidoreductase FAD-binding domain AAX08_03265 PF01980 Uncharacterised protein family UPF0066 AAX08_03270 PF00472 RF-1 domain AAX08_03270 PF03462 PCRF domain AAX08_03275 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AAX08_03275 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AAX08_03280 PF00156 Phosphoribosyl transferase domain AAX08_03285 PF02554 AAX08_03285 AAX08_03285 PF13722 AAX08_03285 AAX08_03290 PF00108 Thiolase, N-terminal domain AAX08_03290 PF02803 Thiolase, C-terminal domain AAX08_03295 PF13561 Enoyl-(Acyl carrier protein) reductase AAX08_03300 PF01575 MaoC like domain AAX08_03300 PF13452 N-terminal half of MaoC dehydratase AAX08_03305 PF00144 Beta-lactamase AAX08_03310 PF00156 Phosphoribosyl transferase domain AAX08_03315 PF00920 Dehydratase family AAX08_03320 PF02028 BCCT family transporter AAX08_03325 PF01594 AAX08_03325 AAX08_03330 PF00633 Helix-hairpin-helix motif AAX08_03330 PF00730 HhH-GPD superfamily base excision DNA repair protein AAX08_03330 PF10576 Iron-sulfur binding domain of endonuclease III AAX08_03335 PF01648 4'-phosphopantetheinyl transferase superfamily AAX08_03340 PF05525 AAX08_03340 AAX08_03345 PF02347 Glycine cleavage system P-protein AAX08_03350 PF01597 Glycine cleavage H-protein AAX08_03355 PF13561 Enoyl-(Acyl carrier protein) reductase AAX08_03360 PF01597 Glycine cleavage H-protein AAX08_03370 PF01571 Aminomethyltransferase folate-binding domain AAX08_03370 PF08669 Glycine cleavage T-protein C-terminal barrel domain AAX08_03380 PF05166 YcgL domain AAX08_03390 PF01250 Ribosomal protein S6 AAX08_03395 PF01084 Ribosomal protein S18 AAX08_03400 PF01281 Ribosomal protein L9, N-terminal domain AAX08_03400 PF03948 Ribosomal protein L9, C-terminal domain AAX08_03415 PF07690 Major Facilitator Superfamily AAX08_03420 PF01103 Surface antigen AAX08_03425 PF04357 AAX08_03425 AAX08_03430 PF00293 NUDIX domain AAX08_03430 PF02581 Thiamine monophosphate synthase/TENI AAX08_03435 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AAX08_03435 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AAX08_03440 PF01018 GTP1/OBG AAX08_03440 PF01926 50S ribosome-binding GTPase AAX08_03445 PF00696 Amino acid kinase family AAX08_03445 PF01472 PUA domain AAX08_03450 PF01208 Uroporphyrinogen decarboxylase (URO-D) AAX08_03455 PF13561 Enoyl-(Acyl carrier protein) reductase AAX08_03460 PF06912 AAX08_03460 AAX08_03470 PF02690 AAX08_03470 AAX08_03475 PF02690 AAX08_03475 AAX08_03480 PF00719 Inorganic pyrophosphatase AAX08_03490 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AAX08_03495 PF02609 Exonuclease VII small subunit AAX08_03500 PF00171 Aldehyde dehydrogenase family AAX08_03505 PF03372 Endonuclease/Exonuclease/phosphatase family AAX08_03510 PF00939 Sodium:sulfate symporter transmembrane region AAX08_03520 PF00696 Amino acid kinase family AAX08_03525 PF01765 Ribosome recycling factor AAX08_03530 PF01255 Putative undecaprenyl diphosphate synthase AAX08_03535 PF01148 Cytidylyltransferase family AAX08_03540 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AAX08_03540 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal AAX08_03540 PF13288 DXP reductoisomerase C-terminal domain AAX08_03545 PF02163 Peptidase family M50 AAX08_03550 PF01103 Surface antigen AAX08_03550 PF07244 Surface antigen variable number repeat AAX08_03555 PF00132 Bacterial transferase hexapeptide (six repeats) AAX08_03555 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AAX08_03555 PF14602 Hexapeptide repeat of succinyl-transferase AAX08_03560 PF07977 FabA-like domain AAX08_03565 PF00132 Bacterial transferase hexapeptide (six repeats) AAX08_03565 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AAX08_03570 PF00209 Sodium:neurotransmitter symporter family AAX08_03575 PF00209 Sodium:neurotransmitter symporter family AAX08_03580 PF01702 Queuine tRNA-ribosyltransferase AAX08_03585 PF04087 AAX08_03585 AAX08_03590 PF02547 Queuosine biosynthesis protein AAX08_03595 PF05940 AAX08_03595 AAX08_03600 PF10609 ParA/MinD ATPase like AAX08_03605 PF00692 dUTPase AAX08_03610 PF09650 AAX08_03610 AAX08_03615 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AAX08_03620 PF02557 D-alanyl-D-alanine carboxypeptidase AAX08_03625 PF01142 tRNA pseudouridine synthase D (TruD) AAX08_03630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AAX08_03630 PF02770 Acyl-CoA dehydrogenase, middle domain AAX08_03630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AAX08_03630 PF12806 AAX08_03630 AAX08_03640 PF00821 Phosphoenolpyruvate carboxykinase AAX08_03640 PF17297 AAX08_03640 AAX08_03645 PF13279 Thioesterase-like superfamily AAX08_03650 PF00849 RNA pseudouridylate synthase AAX08_03650 PF01479 S4 domain AAX08_03655 PF04079 Putative transcriptional regulators (Ypuh-like) AAX08_03660 PF02616 ScpA/B protein AAX08_03665 PF00579 tRNA synthetases class I (W and Y) AAX08_03670 PF00132 Bacterial transferase hexapeptide (six repeats) AAX08_03670 PF06426 Serine acetyltransferase, N-terminal AAX08_03675 PF00588 SpoU rRNA Methylase family AAX08_03680 PF02811 PHP domain AAX08_03680 PF07733 Bacterial DNA polymerase III alpha subunit AAX08_03680 PF14579 Helix-hairpin-helix motif AAX08_03685 PF04257 Exodeoxyribonuclease V, gamma subunit AAX08_03690 PF00580 UvrD/REP helicase N-terminal domain AAX08_03690 PF12705 PD-(D/E)XK nuclease superfamily AAX08_03690 PF13361 UvrD-like helicase C-terminal domain AAX08_03695 PF13538 UvrD-like helicase C-terminal domain AAX08_03695 PF13604 AAA domain AAX08_03700 PF01207 Dihydrouridine synthase (Dus) AAX08_03705 PF00471 Ribosomal protein L33 AAX08_03710 PF00830 Ribosomal L28 family AAX08_03715 PF08888 HopJ type III effector protein AAX08_03720 PF02599 Global regulator protein family AAX08_03725 PF00696 Amino acid kinase family AAX08_03725 PF01842 ACT domain AAX08_03725 PF13840 ACT domain AAX08_03730 PF02627 Carboxymuconolactone decarboxylase family AAX08_03735 PF01411 tRNA synthetases class II (A) AAX08_03735 PF02272 DHHA1 domain AAX08_03735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AAX08_03745 PF00206 Lyase AAX08_03745 PF08328 Adenylosuccinate lyase C-terminal AAX08_03750 PF03054 tRNA methyl transferase AAX08_03755 PF00270 DEAD/DEAH box helicase AAX08_03760 PF09704 CRISPR-associated protein (Cas_Cas5) AAX08_03765 PF09709 AAX08_03765 AAX08_03780 PF01867 CRISPR associated protein Cas1 AAX08_03785 PF09827 CRISPR associated protein Cas2 AAX08_03790 PF01695 IstB-like ATP binding protein AAX08_03795 PF00665 Integrase core domain AAX08_03805 PF03869 Arc-like DNA binding domain AAX08_03810 PF01337 Barstar (barnase inhibitor) AAX08_03815 PF00545 ribonuclease AAX08_03820 PF05860 haemagglutination activity domain AAX08_03820 PF13332 AAX08_03820 AAX08_03830 PF04829 AAX08_03830 AAX08_03850 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AAX08_03850 PF08479 POTRA domain, ShlB-type AAX08_03850 PF17287 AAX08_03850 AAX08_03855 PF02542 YgbB family AAX08_03865 PF00462 Glutaredoxin AAX08_03880 PF01134 Glucose inhibited division protein A AAX08_03880 PF13932 GidA associated domain 3 AAX08_03885 PF03547 AAX08_03885 AAX08_03895 PF08007 Cupin superfamily protein AAX08_03900 PF05175 Methyltransferase small domain AAX08_03910 PF01264 Chorismate synthase AAX08_03915 PF04073 Aminoacyl-tRNA editing domain AAX08_03935 PF13476 AAA domain AAX08_03935 PF13558 Putative exonuclease SbcCD, C subunit AAX08_03940 PF00149 Calcineurin-like phosphoesterase AAX08_03940 PF12320 Type 5 capsule protein repressor C-terminal domain AAX08_03945 PF04359 Protein of unknown function (DUF493) AAX08_03950 PF00140 Sigma-70 factor, region 1 AAX08_03950 PF03979 Sigma-70 factor, region 1 AAX08_03950 PF04539 Sigma-70 region 3 AAX08_03950 PF04542 Sigma-70 region 2 AAX08_03950 PF04545 Sigma-70, region 4 AAX08_03950 PF04546 Sigma-70, non-essential region AAX08_03965 PF00120 Glutamine synthetase, catalytic domain AAX08_03965 PF03951 Glutamine synthetase, beta-Grasp domain AAX08_03970 PF01494 FAD binding domain AAX08_03975 PF03956 AAX08_03975 AAX08_03980 PF00924 Mechanosensitive ion channel AAX08_03990 PF01171 PP-loop family AAX08_03995 PF01220 Dehydroquinase class II AAX08_04000 PF00313 'Cold-shock' DNA-binding domain AAX08_04010 PF00270 DEAD/DEAH box helicase AAX08_04010 PF00271 Helicase conserved C-terminal domain AAX08_04015 PF04055 Radical SAM superfamily AAX08_04015 PF06969 HemN C-terminal domain AAX08_04020 PF08085 AAX08_04020 AAX08_04025 PF00588 SpoU rRNA Methylase family AAX08_04030 PF04358 DsrC like protein AAX08_04040 PF02635 DsrE/DsrF-like family AAX08_04045 PF03710 Glutamate-ammonia ligase adenylyltransferase AAX08_04045 PF08335 GlnD PII-uridylyltransferase AAX08_04050 PF00534 Glycosyl transferases group 1 AAX08_04055 PF04488 Glycosyltransferase sugar-binding region containing DXD motif AAX08_04060 PF00483 Nucleotidyl transferase AAX08_04060 PF01050 Mannose-6-phosphate isomerase AAX08_04065 PF00535 Glycosyl transferase family 2 AAX08_04070 PF01037 AsnC family AAX08_04070 PF13412 Winged helix-turn-helix DNA-binding AAX08_04075 PF00682 HMGL-like AAX08_04075 PF08502 LeuA allosteric (dimerisation) domain AAX08_04090 PF02342 TerD domain AAX08_04095 PF03724 META domain AAX08_04095 PF14302 AAX08_04095 AAX08_04100 PF02075 Crossover junction endodeoxyribonuclease RuvC AAX08_04105 PF04186 AAX08_04105 AAX08_04110 PF02493 MORN repeat AAX08_04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_04115 PF03466 LysR substrate binding domain AAX08_04120 PF07690 Major Facilitator Superfamily AAX08_04125 PF05175 Methyltransferase small domain AAX08_04130 PF00899 ThiF family AAX08_04135 PF03109 AAX08_04135 AAX08_04140 PF01926 50S ribosome-binding GTPase AAX08_04140 PF11981 AAX08_04140 AAX08_04145 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AAX08_04150 PF03435 Saccharopine dehydrogenase AAX08_04150 PF16653 AAX08_04150 AAX08_04155 PF01242 6-pyruvoyl tetrahydropterin synthase AAX08_04160 PF02367 Uncharacterised P-loop hydrolase UPF0079 AAX08_04165 PF01715 IPP transferase AAX08_04170 PF17209 AAX08_04170 AAX08_04175 PF00916 AAX08_04175 AAX08_04175 PF01740 STAS domain AAX08_04180 PF13091 PLD-like domain AAX08_04185 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AAX08_04185 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AAX08_04190 PF01266 FAD dependent oxidoreductase AAX08_04190 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AAX08_04195 PF03795 YCII-related domain AAX08_04200 PF04279 AAX08_04200 AAX08_04205 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_04205 PF02190 ATP-dependent protease La (LON) domain AAX08_04205 PF05362 Lon protease (S16) C-terminal proteolytic domain AAX08_04210 PF03553 AAX08_04210 AAX08_04210 PF13726 AAX08_04210 AAX08_04215 PF00675 Insulinase (Peptidase family M16) AAX08_04215 PF05193 Peptidase M16 inactive domain AAX08_04220 PF00675 Insulinase (Peptidase family M16) AAX08_04220 PF05193 Peptidase M16 inactive domain AAX08_04230 PF00448 SRP54-type protein, GTPase domain AAX08_04230 PF02881 SRP54-type protein, helical bundle domain AAX08_04235 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AAX08_04235 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AAX08_04240 PF01180 Dihydroorotate dehydrogenase AAX08_04245 PF02674 AAX08_04245 AAX08_04250 PF00156 Phosphoribosyl transferase domain AAX08_04250 PF13522 Glutamine amidotransferase domain AAX08_04255 PF01471 Putative peptidoglycan binding domain AAX08_04255 PF13406 Transglycosylase SLT domain AAX08_04260 PF00923 Transaldolase AAX08_04265 PF00800 Prephenate dehydratase AAX08_04265 PF01817 Chorismate mutase type II AAX08_04265 PF01842 ACT domain AAX08_04270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AAX08_04270 PF02153 Prephenate dehydrogenase AAX08_04275 PF00892 EamA-like transporter family AAX08_04280 PF02152 Dihydroneopterin aldolase AAX08_04285 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AAX08_04295 PF03279 AAX08_04295 AAX08_04300 PF00005 ABC transporter AAX08_04300 PF12848 ABC transporter AAX08_04300 PF16326 AAX08_04300 AAX08_04305 PF04102 SlyX AAX08_04310 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AAX08_04315 PF00834 Ribulose-phosphate 3 epimerase family AAX08_04335 PF00072 Response regulator receiver domain AAX08_04335 PF00196 Bacterial regulatory proteins, luxR family AAX08_04340 PF00768 D-alanyl-D-alanine carboxypeptidase AAX08_04345 PF02581 Thiamine monophosphate synthase/TENI AAX08_04350 PF00270 DEAD/DEAH box helicase AAX08_04350 PF00271 Helicase conserved C-terminal domain AAX08_04350 PF02559 CarD-like/TRCF domain AAX08_04350 PF03461 TRCF domain AAX08_04355 PF01230 HIT domain AAX08_04360 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AAX08_04365 PF00162 Phosphoglycerate kinase AAX08_04375 PF01116 Fructose-bisphosphate aldolase class-II AAX08_04380 PF01330 RuvA N terminal domain AAX08_04380 PF07499 RuvA, C-terminal domain AAX08_04380 PF14520 Helix-hairpin-helix domain AAX08_04385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_04385 PF03466 LysR substrate binding domain AAX08_04395 PF00330 Aconitase family (aconitate hydratase) AAX08_04400 PF00694 Aconitase C-terminal domain AAX08_04405 PF00180 Isocitrate/isopropylmalate dehydrogenase AAX08_04410 PF03544 Gram-negative bacterial TonB protein C-terminal AAX08_04415 PF01618 AAX08_04415 AAX08_04420 PF02472 Biopolymer transport protein ExbD/TolR AAX08_04425 PF11067 AAX08_04425 AAX08_04430 PF04060 Putative Fe-S cluster AAX08_04430 PF14697 4Fe-4S dicluster domain AAX08_04435 PF00293 NUDIX domain AAX08_04435 PF09297 NADH pyrophosphatase zinc ribbon domain AAX08_04440 PF00075 RNase H AAX08_04440 PF00929 Exonuclease AAX08_04445 PF02390 Putative methyltransferase AAX08_04450 PF03486 HI0933-like protein AAX08_04455 PF00266 Aminotransferase class-V AAX08_04460 PF00753 Metallo-beta-lactamase superfamily AAX08_04460 PF16123 AAX08_04460 AAX08_04465 PF02659 AAX08_04465 AAX08_04470 PF00398 Ribosomal RNA adenine dimethylase AAX08_04475 PF00149 Calcineurin-like phosphoesterase AAX08_04480 PF01649 Ribosomal protein S20 AAX08_04485 PF13460 NADH(P)-binding AAX08_04490 PF00521 DNA gyrase/topoisomerase IV, subunit A AAX08_04490 PF03989 DNA gyrase C-terminal domain, beta-propeller AAX08_04495 PF08908 AAX08_04495 AAX08_04500 PF01717 Cobalamin-independent synthase, Catalytic domain AAX08_04505 PF01613 Flavin reductase like domain AAX08_04510 PF00043 Glutathione S-transferase, C-terminal domain AAX08_04510 PF02798 Glutathione S-transferase, N-terminal domain AAX08_04520 PF01807 CHC2 zinc finger AAX08_04520 PF08275 DNA primase catalytic core, N-terminal domain AAX08_04520 PF13662 Toprim domain AAX08_04530 PF00849 RNA pseudouridylate synthase AAX08_04535 PF02578 Multi-copper polyphenol oxidoreductase laccase AAX08_04545 PF04052 TolB amino-terminal domain AAX08_04545 PF07676 WD40-like Beta Propeller Repeat AAX08_04555 PF00271 Helicase conserved C-terminal domain AAX08_04555 PF00437 Type II/IV secretion system protein AAX08_04555 PF04408 Helicase associated domain (HA2) AAX08_04555 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AAX08_04555 PF11898 AAX08_04555 AAX08_04560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AAX08_04560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AAX08_04565 PF05958 tRNA (Uracil-5-)-methyltransferase AAX08_04570 PF00929 Exonuclease AAX08_04570 PF12843 AAX08_04570 AAX08_04575 PF00472 RF-1 domain AAX08_04575 PF03462 PCRF domain AAX08_04580 PF14487 AAX08_04580 AAX08_04605 PF00152 tRNA synthetases class II (D, K and N) AAX08_04605 PF01336 OB-fold nucleic acid binding domain AAX08_04615 PF12169 DNA polymerase III subunits gamma and tau domain III AAX08_04615 PF13177 DNA polymerase III, delta subunit AAX08_04620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_04620 PF03466 LysR substrate binding domain AAX08_04635 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain AAX08_04635 PF02785 Biotin carboxylase C-terminal domain AAX08_04635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AAX08_04640 PF00364 Biotin-requiring enzyme AAX08_04645 PF03641 Possible lysine decarboxylase AAX08_04650 PF00892 EamA-like transporter family AAX08_04655 PF02355 Protein export membrane protein AAX08_04655 PF07549 SecD/SecF GG Motif AAX08_04660 PF02355 Protein export membrane protein AAX08_04660 PF07549 SecD/SecF GG Motif AAX08_04660 PF13721 SecD export protein N-terminal TM region AAX08_04665 PF02699 Preprotein translocase subunit AAX08_04670 PF00571 CBS domain AAX08_04670 PF01595 AAX08_04670 AAX08_04680 PF01464 Transglycosylase SLT domain AAX08_04680 PF01476 LysM domain AAX08_04685 PF01784 NIF3 (NGG1p interacting factor 3) AAX08_04690 PF13180 PDZ domain AAX08_04690 PF13365 Trypsin-like peptidase domain AAX08_04700 PF06629 AAX08_04700 AAX08_04705 PF00043 Glutathione S-transferase, C-terminal domain AAX08_04705 PF02798 Glutathione S-transferase, N-terminal domain AAX08_04720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AAX08_04720 PF00364 Biotin-requiring enzyme AAX08_04720 PF02817 e3 binding domain AAX08_04725 PF00456 Transketolase, thiamine diphosphate binding domain AAX08_04730 PF00210 Ferritin-like domain AAX08_04735 PF00210 Ferritin-like domain AAX08_04740 PF04324 BFD-like [2Fe-2S] binding domain AAX08_04745 PF03313 AAX08_04745 AAX08_04745 PF03315 Serine dehydratase beta chain AAX08_04750 PF14302 AAX08_04750 AAX08_04765 PF01960 ArgJ family AAX08_04770 PF03372 Endonuclease/Exonuclease/phosphatase family AAX08_04775 PF03061 Thioesterase superfamily AAX08_04780 PF00005 ABC transporter AAX08_04785 PF03649 AAX08_04785 AAX08_04790 PF00106 short chain dehydrogenase AAX08_04795 PF01343 Peptidase family S49 AAX08_04795 PF08496 AAX08_04795 AAX08_04800 PF00999 Sodium/hydrogen exchanger family AAX08_04805 PF00152 tRNA synthetases class II (D, K and N) AAX08_04805 PF01336 OB-fold nucleic acid binding domain AAX08_04805 PF02938 GAD domain AAX08_04810 PF03279 AAX08_04810 AAX08_04820 PF11840 AAX08_04820 AAX08_04825 PF03884 Domain of unknown function (DUF329) AAX08_04830 PF00202 Aminotransferase class-III AAX08_04835 PF13091 PLD-like domain AAX08_04840 PF07690 Major Facilitator Superfamily AAX08_04845 PF07077 AAX08_04845 AAX08_04855 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AAX08_04860 PF00300 Histidine phosphatase superfamily (branch 1) AAX08_04865 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AAX08_04865 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AAX08_04870 PF00881 Nitroreductase family AAX08_04875 PF03969 AFG1-like ATPase AAX08_04880 PF00561 alpha/beta hydrolase fold AAX08_04890 PF01638 HxlR-like helix-turn-helix AAX08_04900 PF14022 AAX08_04900 AAX08_04910 PF02028 BCCT family transporter AAX08_04925 PF00005 ABC transporter AAX08_04925 PF00664 ABC transporter transmembrane region AAX08_04930 PF00005 ABC transporter AAX08_04930 PF00664 ABC transporter transmembrane region AAX08_04950 PF13672 Protein phosphatase 2C AAX08_04970 PF13280 AAX08_04970 AAX08_04975 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_04980 PF00206 Lyase AAX08_04980 PF10415 Fumarase C C-terminus AAX08_04985 PF01812 5-formyltetrahydrofolate cyclo-ligase family AAX08_04990 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AAX08_04995 PF00772 DnaB-like helicase N terminal domain AAX08_04995 PF03796 DnaB-like helicase C terminal domain AAX08_05000 PF00842 Alanine racemase, C-terminal domain AAX08_05000 PF01168 Alanine racemase, N-terminal domain AAX08_05005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AAX08_05005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AAX08_05010 PF04402 Protein of unknown function (DUF541) AAX08_05015 PF01471 Putative peptidoglycan binding domain AAX08_05015 PF03734 L,D-transpeptidase catalytic domain AAX08_05020 PF00171 Aldehyde dehydrogenase family AAX08_05020 PF01619 Proline dehydrogenase AAX08_05020 PF14850 DNA-binding domain of Proline dehydrogenase AAX08_05025 PF00317 Ribonucleotide reductase, all-alpha domain AAX08_05025 PF02867 Ribonucleotide reductase, barrel domain AAX08_05025 PF03477 ATP cone domain AAX08_05030 PF02575 YbaB/EbfC DNA-binding family AAX08_05035 PF02132 RecR protein AAX08_05035 PF13662 Toprim domain AAX08_05045 PF05088 AAX08_05045 AAX08_05050 PF02601 AAX08_05050 AAX08_05050 PF13742 AAX08_05050 AAX08_05055 PF00881 Nitroreductase family AAX08_05060 PF03572 Peptidase family S41 AAX08_05060 PF13180 PDZ domain AAX08_05065 PF01676 Metalloenzyme superfamily AAX08_05065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AAX08_05080 PF03922 OmpW family AAX08_05085 PF00271 Helicase conserved C-terminal domain AAX08_05085 PF02151 UvrB/uvrC motif AAX08_05085 PF04851 Type III restriction enzyme, res subunit AAX08_05085 PF12344 Ultra-violet resistance protein B AAX08_05095 PF00301 Rubredoxin AAX08_05100 PF00561 alpha/beta hydrolase fold AAX08_05105 PF01557 Fumarylacetoacetate (FAA) hydrolase family AAX08_05110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AAX08_05110 PF02843 Phosphoribosylglycinamide synthetase, C domain AAX08_05110 PF02844 Phosphoribosylglycinamide synthetase, N domain AAX08_05115 PF03109 AAX08_05115 AAX08_05120 PF03976 Polyphosphate kinase 2 (PPK2) AAX08_05135 PF00111 2Fe-2S iron-sulfur cluster binding domain AAX08_05140 PF00268 Ribonucleotide reductase, small chain AAX08_05150 PF08238 Sel1 repeat AAX08_05155 PF01053 Cys/Met metabolism PLP-dependent enzyme AAX08_05160 PF01063 Aminotransferase class IV AAX08_05165 PF06738 AAX08_05165 AAX08_05170 PF12821 AAX08_05170 AAX08_05180 PF00873 AcrB/AcrD/AcrF family AAX08_05185 PF16576 AAX08_05185 AAX08_05210 PF08291 Peptidase M15 AAX08_05215 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel AAX08_05220 PF05362 Lon protease (S16) C-terminal proteolytic domain AAX08_05220 PF13481 AAA domain AAX08_05225 PF00005 ABC transporter AAX08_05225 PF12399 Branched-chain amino acid ATP-binding cassette transporter AAX08_05230 PF03968 OstA-like protein AAX08_05235 PF06835 Lipopolysaccharide-assembly, LptC-related AAX08_05240 PF08282 haloacid dehalogenase-like hydrolase AAX08_05245 PF00571 CBS domain AAX08_05245 PF01380 SIS domain AAX08_05250 PF01040 UbiA prenyltransferase family AAX08_05260 PF04445 Putative SAM-dependent methyltransferase AAX08_05265 PF02673 AAX08_05265 AAX08_05270 PF00814 Glycoprotease family AAX08_05275 PF00448 SRP54-type protein, GTPase domain AAX08_05275 PF02881 SRP54-type protein, helical bundle domain AAX08_05275 PF02978 Signal peptide binding domain AAX08_05280 PF01578 AAX08_05280 AAX08_05285 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AAX08_05285 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AAX08_05290 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_05290 PF02861 Clp amino terminal domain AAX08_05290 PF07724 AAA domain (Cdc48 subfamily) AAX08_05290 PF10431 C-terminal, D2-small domain, of ClpB protein AAX08_05295 PF02617 ATP-dependent Clp protease adaptor protein ClpS AAX08_05305 PF00122 E1-E2 ATPase AAX08_05305 PF00403 Heavy-metal-associated domain AAX08_05305 PF00702 haloacid dehalogenase-like hydrolase AAX08_05310 PF00403 Heavy-metal-associated domain AAX08_05315 PF01118 Semialdehyde dehydrogenase, NAD binding domain AAX08_05315 PF02774 Semialdehyde dehydrogenase, dimerisation domain AAX08_05320 PF01227 GTP cyclohydrolase I AAX08_05330 PF02562 PhoH-like protein AAX08_05335 PF02130 Uncharacterized protein family UPF0054 AAX08_05340 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AAX08_05345 PF06305 AAX08_05345 AAX08_05350 PF00216 Bacterial DNA-binding protein AAX08_05355 PF00575 S1 RNA binding domain AAX08_05365 PF02224 Cytidylate kinase AAX08_05370 PF14437 AAX08_05370 AAX08_05375 PF03167 Uracil DNA glycosylase superfamily AAX08_05380 PF06271 AAX08_05380 AAX08_05380 PF14237 AAX08_05380 AAX08_05390 PF07690 Major Facilitator Superfamily AAX08_05395 PF00391 PEP-utilising enzyme, mobile domain AAX08_05395 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AAX08_05395 PF02896 PEP-utilising enzyme, TIM barrel domain AAX08_05400 PF03618 AAX08_05400 AAX08_05405 PF14302 AAX08_05405 AAX08_05410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AAX08_05410 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_05415 PF00924 Mechanosensitive ion channel AAX08_05415 PF05552 Conserved TM helix AAX08_05420 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AAX08_05420 PF10414 Sirohaem synthase dimerisation region AAX08_05420 PF13241 Putative NAD(P)-binding AAX08_05420 PF14824 Sirohaem biosynthesis protein central AAX08_05425 PF06073 AAX08_05425 AAX08_05430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AAX08_05430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AAX08_05435 PF01566 AAX08_05435 AAX08_05440 PF00155 Aminotransferase class I and II AAX08_05440 PF12844 Helix-turn-helix domain AAX08_05445 PF01641 SelR domain AAX08_05450 PF00255 Glutathione peroxidase AAX08_05465 PF00919 Uncharacterized protein family UPF0004 AAX08_05465 PF04055 Radical SAM superfamily AAX08_05470 PF00117 Glutamine amidotransferase class-I AAX08_05475 PF00591 Glycosyl transferase family, a/b domain AAX08_05475 PF02885 Glycosyl transferase family, helical bundle domain AAX08_05480 PF00218 Indole-3-glycerol phosphate synthase AAX08_05485 PF01914 AAX08_05485 AAX08_05490 PF06508 Queuosine biosynthesis protein QueC AAX08_05495 PF00893 Small Multidrug Resistance protein AAX08_05500 PF00440 Bacterial regulatory proteins, tetR family AAX08_05505 PF00860 Permease family AAX08_05510 PF00578 AhpC/TSA family AAX08_05515 PF00534 Glycosyl transferases group 1 AAX08_05515 PF13439 Glycosyltransferase Family 4 AAX08_05520 PF01118 Semialdehyde dehydrogenase, NAD binding domain AAX08_05520 PF02774 Semialdehyde dehydrogenase, dimerisation domain AAX08_05525 PF00710 Asparaginase AAX08_05530 PF01416 tRNA pseudouridine synthase AAX08_05545 PF01176 Translation initiation factor 1A / IF-1 AAX08_05550 PF00561 alpha/beta hydrolase fold AAX08_05555 PF02230 Phospholipase/Carboxylesterase AAX08_05560 PF04228 AAX08_05560 AAX08_05570 PF00005 ABC transporter AAX08_05570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AAX08_05575 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_05575 PF12911 AAX08_05575 AAX08_05580 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_05585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AAX08_05590 PF00709 Adenylosuccinate synthetase AAX08_05595 PF13393 Histidyl-tRNA synthetase AAX08_05600 PF01544 CorA-like Mg2+ transporter protein AAX08_05605 PF13566 AAX08_05605 AAX08_05610 PF04055 Radical SAM superfamily AAX08_05615 PF00849 RNA pseudouridylate synthase AAX08_05620 PF13177 DNA polymerase III, delta subunit AAX08_05625 PF02348 Cytidylyltransferase AAX08_05630 PF12844 Helix-turn-helix domain AAX08_05635 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AAX08_05640 PF00005 ABC transporter AAX08_05640 PF00664 ABC transporter transmembrane region AAX08_05645 PF02195 ParB-like nuclease domain AAX08_05650 PF13614 AAA domain AAX08_05655 PF02527 rRNA small subunit methyltransferase G AAX08_05660 PF05362 Lon protease (S16) C-terminal proteolytic domain AAX08_05660 PF13654 AAA domain AAX08_05670 PF01925 AAX08_05670 AAX08_05675 PF01925 AAX08_05675 AAX08_05700 PF01022 Bacterial regulatory protein, arsR family AAX08_05705 PF00107 Zinc-binding dehydrogenase AAX08_05705 PF08240 Alcohol dehydrogenase GroES-like domain AAX08_05710 PF00756 Putative esterase AAX08_05715 PF00085 Thioredoxin AAX08_05725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AAX08_05730 PF04993 TfoX N-terminal domain AAX08_05735 PF10136 AAX08_05735 AAX08_05740 PF00580 UvrD/REP helicase N-terminal domain AAX08_05740 PF13361 UvrD-like helicase C-terminal domain AAX08_05745 PF14903 AAX08_05745 AAX08_05750 PF03891 AAX08_05750 AAX08_05760 PF00348 Polyprenyl synthetase AAX08_05765 PF00793 DAHP synthetase I family AAX08_05770 PF16576 AAX08_05770 AAX08_05775 PF00005 ABC transporter AAX08_05775 PF02687 AAX08_05775 AAX08_05775 PF12704 MacB-like periplasmic core domain AAX08_05780 PF02321 Outer membrane efflux protein AAX08_05785 PF00892 EamA-like transporter family AAX08_05800 PF01713 Smr domain AAX08_05805 PF00909 Ammonium Transporter Family AAX08_05810 PF00543 Nitrogen regulatory protein P-II AAX08_05815 PF02684 AAX08_05815 AAX08_05820 PF01351 Ribonuclease HII AAX08_05825 PF13490 Putative zinc-finger AAX08_05830 PF04542 Sigma-70 region 2 AAX08_05830 PF08281 Sigma-70, region 4 AAX08_05835 PF07681 AAX08_05835 AAX08_05840 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) AAX08_05845 PF05114 Protein of unknown function (DUF692) AAX08_05850 PF11127 Protein of unknown function (DUF2892) AAX08_05855 PF00581 Rhodanese-like domain AAX08_05860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AAX08_05860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_05875 PF03625 Domain of unknown function DUF302 AAX08_05880 PF01926 50S ribosome-binding GTPase AAX08_05880 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AAX08_05885 PF13360 PQQ-like domain AAX08_05890 PF09976 Tetratricopeptide repeat AAX08_05895 PF03129 Anticodon binding domain AAX08_05895 PF13393 Histidyl-tRNA synthetase AAX08_05905 PF04551 GcpE protein AAX08_05910 PF13424 Tetratricopeptide repeat AAX08_05915 PF04055 Radical SAM superfamily AAX08_05920 PF00334 Nucleoside diphosphate kinase AAX08_05925 PF01926 50S ribosome-binding GTPase AAX08_05925 PF06071 Protein of unknown function (DUF933) AAX08_05935 PF00440 Bacterial regulatory proteins, tetR family AAX08_05940 PF03372 Endonuclease/Exonuclease/phosphatase family AAX08_05950 PF02810 SEC-C motif AAX08_05955 PF02503 Polyphosphate kinase middle domain AAX08_05955 PF13089 Polyphosphate kinase N-terminal domain AAX08_05955 PF13090 Polyphosphate kinase C-terminal domain AAX08_05960 PF00912 Transglycosylase AAX08_05965 PF05768 Glutaredoxin-like domain (DUF836) AAX08_05970 PF02652 AAX08_05970 AAX08_05980 PF01070 FMN-dependent dehydrogenase AAX08_05985 PF00639 PPIC-type PPIASE domain AAX08_05985 PF13624 SurA N-terminal domain AAX08_05990 PF00216 Bacterial DNA-binding protein AAX08_06000 PF02082 Transcriptional regulator AAX08_06005 PF00266 Aminotransferase class-V AAX08_06010 PF01592 NifU-like N terminal domain AAX08_06015 PF01521 Iron-sulphur cluster biosynthesis AAX08_06020 PF07743 HSCB C-terminal oligomerisation domain AAX08_06025 PF00012 Hsp70 protein AAX08_06030 PF00111 2Fe-2S iron-sulfur cluster binding domain AAX08_06035 PF00551 Formyl transferase AAX08_06040 PF00586 AIR synthase related protein, N-terminal domain AAX08_06040 PF02769 AIR synthase related protein, C-terminal domain AAX08_06045 PF01594 AAX08_06045 AAX08_06050 PF00308 Bacterial dnaA protein AAX08_06055 PF09829 AAX08_06055 AAX08_06060 PF01016 Ribosomal L27 protein AAX08_06065 PF00829 Ribosomal prokaryotic L21 protein AAX08_06075 PF04536 TLP18 AAX08_06080 PF04536 TLP18 AAX08_06085 PF04011 LemA family AAX08_06090 PF01235 AAX08_06090 AAX08_06095 PF00085 Thioredoxin AAX08_06095 PF02683 AAX08_06095 AAX08_06095 PF11412 Disulphide bond corrector protein DsbC AAX08_06100 PF02322 AAX08_06100 AAX08_06105 PF01654 AAX08_06105 AAX08_06110 PF13609 Gram-negative porin AAX08_06115 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AAX08_06120 PF01256 Carbohydrate kinase AAX08_06120 PF03853 YjeF-related protein N-terminus AAX08_06125 PF02678 Pirin AAX08_06130 PF14903 AAX08_06130 AAX08_06135 PF04172 AAX08_06135 AAX08_06150 PF01926 50S ribosome-binding GTPase AAX08_06150 PF13167 AAX08_06150 AAX08_06150 PF16360 AAX08_06150 AAX08_06155 PF00809 Pterin binding enzyme AAX08_06160 PF12706 Beta-lactamase superfamily domain AAX08_06175 PF01062 AAX08_06175 AAX08_06180 PF01476 LysM domain AAX08_06180 PF01551 Peptidase family M23 AAX08_06185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AAX08_06185 PF02378 Phosphotransferase system, EIIC AAX08_06190 PF00294 pfkB family carbohydrate kinase AAX08_06195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AAX08_06195 PF00381 PTS HPr component phosphorylation site AAX08_06195 PF00391 PEP-utilising enzyme, mobile domain AAX08_06195 PF02896 PEP-utilising enzyme, TIM barrel domain AAX08_06195 PF05524 PEP-utilising enzyme, N-terminal AAX08_06200 PF04247 AAX08_06200 AAX08_06205 PF01272 Transcription elongation factor, GreA/GreB, C-term AAX08_06205 PF03449 Transcription elongation factor, N-terminal AAX08_06210 PF02142 MGS-like domain AAX08_06210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AAX08_06210 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AAX08_06215 PF00117 Glutamine amidotransferase class-I AAX08_06215 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AAX08_06220 PF04332 AAX08_06220 AAX08_06230 PF00857 Isochorismatase family AAX08_06235 PF00175 Oxidoreductase NAD-binding domain AAX08_06240 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AAX08_06245 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AAX08_06250 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains AAX08_06250 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AAX08_06255 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AAX08_06265 PF12838 4Fe-4S dicluster domain AAX08_06270 PF00146 NADH dehydrogenase AAX08_06275 PF00111 2Fe-2S iron-sulfur cluster binding domain AAX08_06275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AAX08_06275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AAX08_06280 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AAX08_06280 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AAX08_06285 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin AAX08_06290 PF12833 Helix-turn-helix domain AAX08_06290 PF12852 Cupin AAX08_06295 PF03572 Peptidase family S41 AAX08_06300 PF01385 AAX08_06300 AAX08_06300 PF07282 AAX08_06300 AAX08_06305 PF01797 Transposase IS200 like AAX08_06320 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AAX08_06320 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AAX08_06325 PF00892 EamA-like transporter family AAX08_06330 PF00487 AAX08_06330 AAX08_06335 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AAX08_06340 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AAX08_06345 PF03548 Outer membrane lipoprotein carrier protein LolA AAX08_06350 PF00691 OmpA family AAX08_06360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AAX08_06360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AAX08_06360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AAX08_06360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AAX08_06365 PF02517 CAAX protease self-immunity AAX08_06375 PF01207 Dihydrouridine synthase (Dus) AAX08_06380 PF00589 Phage integrase family AAX08_06385 PF11112 AAX08_06385 AAX08_06400 PF00436 Single-strand binding protein family AAX08_06430 PF00717 Peptidase S24-like AAX08_06430 PF01381 Helix-turn-helix AAX08_06435 PF15943 AAX08_06435 AAX08_06440 PF08273 Zinc-binding domain of primase-helicase AAX08_06465 PF03354 AAX08_06465 AAX08_06470 PF04586 AAX08_06470 AAX08_06475 PF05065 Phage capsid family AAX08_06485 PF04860 Phage portal protein AAX08_06490 PF05135 Phage gp6-like head-tail connector protein AAX08_06495 PF05521 Phage head-tail joining protein AAX08_06505 PF11367 Protein of unknown function (DUF3168) AAX08_06515 PF16459 AAX08_06515 AAX08_06520 PF13227 AAX08_06520 AAX08_06535 PF05939 AAX08_06535 AAX08_06545 PF05100 AAX08_06545 AAX08_06550 PF00877 NlpC/P60 family AAX08_06550 PF14464 Prokaryotic homologs of the JAB domain AAX08_06560 PF06805 AAX08_06560 AAX08_06590 PF05257 CHAP domain AAX08_06595 PF01026 TatD related DNase AAX08_06600 PF00924 Mechanosensitive ion channel AAX08_06605 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain AAX08_06605 PF05221 S-adenosyl-L-homocysteine hydrolase AAX08_06610 PF06961 AAX08_06610 AAX08_06615 PF04452 RNA methyltransferase AAX08_06620 PF00817 impB/mucB/samB family AAX08_06620 PF11798 IMS family HHH motif AAX08_06620 PF11799 impB/mucB/samB family C-terminal domain AAX08_06625 PF12710 haloacid dehalogenase-like hydrolase AAX08_06630 PF06078 Bacterial protein of unknown function (DUF937) AAX08_06640 PF03937 Flavinator of succinate dehydrogenase AAX08_06645 PF01384 AAX08_06645 AAX08_06655 PF01209 ubiE/COQ5 methyltransferase family AAX08_06660 PF02036 SCP-2 sterol transfer family AAX08_06665 PF03109 AAX08_06665 AAX08_06675 PF07023 AAX08_06675 AAX08_06680 PF01513 ATP-NAD kinase AAX08_06685 PF12811 AAX08_06685 AAX08_06690 PF00122 E1-E2 ATPase AAX08_06690 PF00403 Heavy-metal-associated domain AAX08_06690 PF00702 haloacid dehalogenase-like hydrolase AAX08_06690 PF12156 AAX08_06690 AAX08_06700 PF06325 Ribosomal protein L11 methyltransferase (PrmA) AAX08_06705 PF02954 Bacterial regulatory protein, Fis family AAX08_06710 PF01808 AICARFT/IMPCHase bienzyme AAX08_06710 PF02142 MGS-like domain AAX08_06720 PF01343 Peptidase family S49 AAX08_06725 PF03772 AAX08_06725 AAX08_06730 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AAX08_06735 PF04977 Septum formation initiator AAX08_06740 PF00113 Enolase, C-terminal TIM barrel domain AAX08_06740 PF03952 Enolase, N-terminal domain AAX08_06745 PF00793 DAHP synthetase I family AAX08_06750 PF00117 Glutamine amidotransferase class-I AAX08_06750 PF06418 CTP synthase N-terminus AAX08_06755 PF13387 AAX08_06755 AAX08_06760 PF03352 Methyladenine glycosylase AAX08_06765 PF00581 Rhodanese-like domain AAX08_06785 PF05690 Thiazole biosynthesis protein ThiG AAX08_06790 PF03007 AAX08_06790 AAX08_06790 PF06974 AAX08_06790 AAX08_06800 PF13518 Helix-turn-helix domain AAX08_06805 PF00459 Inositol monophosphatase family AAX08_06810 PF02779 Transketolase, pyrimidine binding domain AAX08_06810 PF02780 Transketolase, C-terminal domain AAX08_06810 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AAX08_06815 PF00925 GTP cyclohydrolase II AAX08_06820 PF01218 Coproporphyrinogen III oxidase AAX08_06825 PF01322 Cytochrome C' AAX08_06830 PF01385 AAX08_06830 AAX08_06830 PF07282 AAX08_06830 AAX08_06835 PF01797 Transposase IS200 like AAX08_06840 PF00593 TonB dependent receptor AAX08_06840 PF07715 TonB-dependent Receptor Plug Domain AAX08_06845 PF01298 Transferrin binding protein-like solute binding protein AAX08_06845 PF17484 AAX08_06845 AAX08_06850 PF04575 AAX08_06850 AAX08_06855 PF10881 AAX08_06855 AAX08_06860 PF02698 DUF218 domain AAX08_06865 PF01476 LysM domain AAX08_06865 PF05036 Sporulation related domain AAX08_06870 PF08245 Mur ligase middle domain AAX08_06875 PF01039 Carboxyl transferase domain AAX08_06880 PF00290 Tryptophan synthase alpha chain AAX08_06890 PF01420 Type I restriction modification DNA specificity domain AAX08_06895 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AAX08_06895 PF04851 Type III restriction enzyme, res subunit AAX08_06895 PF12008 Type I restriction and modification enzyme - subunit R C terminal AAX08_06900 PF01420 Type I restriction modification DNA specificity domain AAX08_06905 PF02384 N-6 DNA Methylase AAX08_06905 PF12161 HsdM N-terminal domain AAX08_06910 PF01420 Type I restriction modification DNA specificity domain AAX08_06915 PF00589 Phage integrase family AAX08_06920 PF01661 Macro domain AAX08_06925 PF00291 Pyridoxal-phosphate dependent enzyme AAX08_06930 PF00106 short chain dehydrogenase AAX08_06935 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AAX08_06940 PF14014 AAX08_06940 AAX08_06945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AAX08_06945 PF03129 Anticodon binding domain AAX08_06945 PF04073 Aminoacyl-tRNA editing domain AAX08_06950 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AAX08_06950 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AAX08_06955 PF05970 AAX08_06955 AAX08_06955 PF14493 AAX08_06955 AAX08_06960 PF00171 Aldehyde dehydrogenase family AAX08_06965 PF00456 Transketolase, thiamine diphosphate binding domain AAX08_06965 PF02779 Transketolase, pyrimidine binding domain AAX08_06965 PF02780 Transketolase, C-terminal domain AAX08_06970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AAX08_06970 PF02403 Seryl-tRNA synthetase N-terminal domain AAX08_06980 PF00210 Ferritin-like domain AAX08_06985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AAX08_06990 PF00484 Carbonic anhydrase AAX08_07000 PF01761 3-dehydroquinate synthase AAX08_07005 PF01202 Shikimate kinase AAX08_07010 PF00263 AAX08_07010 AAX08_07010 PF03958 Bacterial type II/III secretion system short domain AAX08_07015 PF04351 Pilus assembly protein, PilP AAX08_07020 PF04350 Pilus assembly protein, PilO AAX08_07025 PF05137 AAX08_07025 AAX08_07030 PF11104 Type IV pilus assembly protein PilM; AAX08_07040 PF00795 Carbon-nitrogen hydrolase AAX08_07040 PF02540 NAD synthase AAX08_07045 PF01168 Alanine racemase, N-terminal domain AAX08_07050 PF00437 Type II/IV secretion system protein AAX08_07055 PF01475 Ferric uptake regulator family AAX08_07060 PF04355 SmpA / OmlA family AAX08_07065 PF03658 RnfH family Ubiquitin AAX08_07075 PF00034 Cytochrome c AAX08_07080 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AAX08_07095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AAX08_07100 PF09424 Yqey-like protein AAX08_07105 PF01435 Peptidase family M48 AAX08_07105 PF14559 Tetratricopeptide repeat AAX08_07110 PF01206 Sulfurtransferase TusA AAX08_07115 PF00140 Sigma-70 factor, region 1 AAX08_07115 PF04542 Sigma-70 region 2 AAX08_07115 PF04545 Sigma-70, region 4 AAX08_07120 PF04241 AAX08_07120 AAX08_07125 PF02597 ThiS family AAX08_07130 PF00795 Carbon-nitrogen hydrolase AAX08_07135 PF03379 AAX08_07135 AAX08_07140 PF00005 ABC transporter AAX08_07145 PF10722 Putative bacterial sensory transduction regulator AAX08_07160 PF00691 OmpA family AAX08_07175 PF06044 Dam-replacing family AAX08_07180 PF00133 tRNA synthetases class I (I, L, M and V) AAX08_07180 PF08264 Anticodon-binding domain of tRNA AAX08_07180 PF10458 Valyl tRNA synthetase tRNA binding arm AAX08_07185 PF01906 Putative heavy-metal-binding AAX08_07190 PF01906 Putative heavy-metal-binding AAX08_07195 PF03695 Uncharacterised protein family (UPF0149) AAX08_07210 PF12710 haloacid dehalogenase-like hydrolase AAX08_07220 PF04055 Radical SAM superfamily AAX08_07220 PF06968 Biotin and Thiamin Synthesis associated domain AAX08_07225 PF00657 GDSL-like Lipase/Acylhydrolase AAX08_07225 PF03797 Autotransporter beta-domain AAX08_07230 PF03653 AAX08_07230 AAX08_07240 PF01138 3' exoribonuclease family, domain 1 AAX08_07240 PF03725 3' exoribonuclease family, domain 2 AAX08_07245 PF00501 AMP-binding enzyme AAX08_07245 PF13193 AMP-binding enzyme C-terminal domain AAX08_07250 PF00501 AMP-binding enzyme AAX08_07250 PF13193 AMP-binding enzyme C-terminal domain AAX08_07255 PF01925 AAX08_07255 AAX08_07260 PF02441 Flavoprotein AAX08_07260 PF04127 DNA / pantothenate metabolism flavoprotein AAX08_07265 PF08002 Protein of unknown function (DUF1697) AAX08_07270 PF01925 AAX08_07270 AAX08_07275 PF00375 Sodium:dicarboxylate symporter family AAX08_07280 PF00082 Subtilase family AAX08_07280 PF03797 Autotransporter beta-domain AAX08_07285 PF06965 Na+/H+ antiporter 1 AAX08_07305 PF00487 AAX08_07305 AAX08_07310 PF02696 AAX08_07310 AAX08_07320 PF03597 AAX08_07320 AAX08_07325 PF13386 AAX08_07325 AAX08_07330 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AAX08_07330 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AAX08_07335 PF01650 Peptidase C13 family AAX08_07340 PF00814 Glycoprotease family AAX08_07350 PF00474 Sodium:solute symporter family AAX08_07355 PF13937 AAX08_07355 AAX08_07360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_07360 PF03466 LysR substrate binding domain AAX08_07365 PF13714 Phosphoenolpyruvate phosphomutase AAX08_07370 PF00285 Citrate synthase AAX08_07380 PF00330 Aconitase family (aconitate hydratase) AAX08_07380 PF00694 Aconitase C-terminal domain AAX08_07385 PF03235 AAX08_07385 AAX08_07385 PF07510 AAX08_07385 AAX08_07390 PF04303 PrpF protein AAX08_07400 PF00905 Penicillin binding protein transpeptidase domain AAX08_07400 PF00912 Transglycosylase AAX08_07400 PF17092 AAX08_07400 AAX08_07405 PF01370 NAD dependent epimerase/dehydratase family AAX08_07410 PF13387 AAX08_07410 AAX08_07415 PF01510 N-acetylmuramoyl-L-alanine amidase AAX08_07420 PF03023 AAX08_07420 AAX08_07430 PF00037 4Fe-4S binding domain AAX08_07430 PF11953 Domain of unknown function (DUF3470) AAX08_07435 PF07690 Major Facilitator Superfamily AAX08_07450 PF01235 AAX08_07450 AAX08_07455 PF00860 Permease family AAX08_07460 PF00133 tRNA synthetases class I (I, L, M and V) AAX08_07460 PF06827 Zinc finger found in FPG and IleRS AAX08_07460 PF08264 Anticodon-binding domain of tRNA AAX08_07465 PF01252 AAX08_07465 AAX08_07470 PF01298 Transferrin binding protein-like solute binding protein AAX08_07475 PF04575 AAX08_07475 AAX08_07480 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AAX08_07485 PF01553 Acyltransferase AAX08_07490 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_07490 PF01434 Peptidase family M41 AAX08_07490 PF06480 FtsH Extracellular AAX08_07495 PF01728 FtsJ-like methyltransferase AAX08_07500 PF01985 CRS1 / YhbY (CRM) domain AAX08_07510 PF05257 CHAP domain AAX08_07515 PF05258 AAX08_07515 AAX08_07520 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AAX08_07525 PF13148 AAX08_07525 AAX08_07555 PF05930 Prophage CP4-57 regulatory protein (AlpA) AAX08_07570 PF00589 Phage integrase family AAX08_07570 PF13356 Domain of unknown function (DUF4102) AAX08_07580 PF04055 Radical SAM superfamily AAX08_07580 PF13394 4Fe-4S single cluster domain AAX08_07585 PF01132 Elongation factor P (EF-P) OB domain AAX08_07585 PF08207 Elongation factor P (EF-P) KOW-like domain AAX08_07585 PF09285 Elongation factor P, C-terminal AAX08_07590 PF00899 ThiF family AAX08_07595 PF01026 TatD related DNase AAX08_07600 PF06189 AAX08_07600 AAX08_07605 PF12019 Type II transport protein GspH AAX08_07635 PF04851 Type III restriction enzyme, res subunit AAX08_07635 PF07669 Eco57I restriction-modification methylase AAX08_07635 PF10544 AAX08_07635 AAX08_07650 PF01066 CDP-alcohol phosphatidyltransferase AAX08_07655 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ AAX08_07660 PF13640 2OG-Fe(II) oxygenase superfamily AAX08_07665 PF00892 EamA-like transporter family AAX08_07670 PF00892 EamA-like transporter family AAX08_07675 PF01546 Peptidase family M20/M25/M40 AAX08_07675 PF07687 Peptidase dimerisation domain AAX08_07680 PF13343 Bacterial extracellular solute-binding protein AAX08_07685 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_07690 PF00005 ABC transporter AAX08_07695 PF03806 AAX08_07695 AAX08_07700 PF04384 Iron-sulphur cluster assembly AAX08_07705 PF02677 AAX08_07705 AAX08_07710 PF00141 Peroxidase AAX08_07715 PF00141 Peroxidase AAX08_07730 PF00199 Catalase AAX08_07730 PF06628 Catalase-related immune-responsive AAX08_07735 PF16113 AAX08_07735 AAX08_07740 PF03883 AAX08_07740 AAX08_07745 PF01515 Phosphate acetyl/butaryl transferase AAX08_07750 PF00871 Acetokinase family AAX08_07755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AAX08_07755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AAX08_07760 PF01678 Diaminopimelate epimerase AAX08_07765 PF00589 Phage integrase family AAX08_07765 PF02899 Phage integrase, N-terminal SAM-like domain AAX08_07770 PF00593 TonB dependent receptor AAX08_07770 PF07715 TonB-dependent Receptor Plug Domain AAX08_07780 PF00593 TonB dependent receptor AAX08_07780 PF07715 TonB-dependent Receptor Plug Domain AAX08_07785 PF12838 4Fe-4S dicluster domain AAX08_07790 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AAX08_07795 PF14131 Domain of unknown function (DUF4298) AAX08_07800 PF01136 AAX08_07800 AAX08_07800 PF16325 AAX08_07800 AAX08_07810 PF01565 FAD binding domain AAX08_07810 PF02913 FAD linked oxidases, C-terminal domain AAX08_07815 PF00118 TCP-1/cpn60 chaperonin family AAX08_07820 PF00166 Chaperonin 10 Kd subunit AAX08_07835 PF11306 Protein of unknown function (DUF3108) AAX08_07845 PF03358 NADPH-dependent FMN reductase AAX08_07850 PF03631 AAX08_07850 AAX08_07860 PF08238 Sel1 repeat AAX08_07865 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AAX08_07865 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AAX08_07870 PF00316 Fructose-1-6-bisphosphatase AAX08_07875 PF00588 SpoU rRNA Methylase family AAX08_07880 PF00149 Calcineurin-like phosphoesterase AAX08_07885 PF00766 Electron transfer flavoprotein FAD-binding domain AAX08_07885 PF01012 Electron transfer flavoprotein domain AAX08_07890 PF01012 Electron transfer flavoprotein domain AAX08_07895 PF00313 'Cold-shock' DNA-binding domain AAX08_07905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AAX08_07905 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain AAX08_07910 PF01850 PIN domain AAX08_07915 PF03992 Antibiotic biosynthesis monooxygenase AAX08_07920 PF10369 Small subunit of acetolactate synthase AAX08_07920 PF13710 ACT domain AAX08_07925 PF00205 Thiamine pyrophosphate enzyme, central domain AAX08_07925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AAX08_07925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AAX08_07935 PF01476 LysM domain AAX08_07935 PF04972 BON domain AAX08_07940 PF00550 Phosphopantetheine attachment site AAX08_07945 PF13561 Enoyl-(Acyl carrier protein) reductase AAX08_07950 PF00698 Acyl transferase domain AAX08_07955 PF01783 Ribosomal L32p protein family AAX08_07960 PF02620 AAX08_07960 AAX08_07965 PF04315 AAX08_07965 AAX08_07970 PF01300 Telomere recombination AAX08_07975 PF01196 Ribosomal protein L17 AAX08_07980 PF01000 RNA polymerase Rpb3/RpoA insert domain AAX08_07980 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AAX08_07980 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AAX08_07985 PF00163 Ribosomal protein S4/S9 N-terminal domain AAX08_07985 PF01479 S4 domain AAX08_07990 PF00411 Ribosomal protein S11 AAX08_07995 PF00416 Ribosomal protein S13/S18 AAX08_08000 PF00444 Ribosomal protein L36 AAX08_08005 PF00344 SecY translocase AAX08_08010 PF00828 Ribosomal protein L18e/L15 AAX08_08015 PF00327 Ribosomal protein L30p/L7e AAX08_08020 PF00333 Ribosomal protein S5, N-terminal domain AAX08_08020 PF03719 Ribosomal protein S5, C-terminal domain AAX08_08025 PF00861 Ribosomal L18p/L5e family AAX08_08030 PF00347 Ribosomal protein L6 AAX08_08035 PF00410 Ribosomal protein S8 AAX08_08040 PF00253 Ribosomal protein S14p/S29e AAX08_08045 PF00281 Ribosomal protein L5 AAX08_08045 PF00673 ribosomal L5P family C-terminus AAX08_08050 PF00467 KOW motif AAX08_08050 PF17136 AAX08_08050 AAX08_08055 PF00238 Ribosomal protein L14p/L23e AAX08_08060 PF00366 Ribosomal protein S17 AAX08_08065 PF00831 Ribosomal L29 protein AAX08_08070 PF00252 Ribosomal protein L16p/L10e AAX08_08075 PF00189 Ribosomal protein S3, C-terminal domain AAX08_08075 PF07650 KH domain AAX08_08080 PF00237 Ribosomal protein L22p/L17e AAX08_08085 PF00203 Ribosomal protein S19 AAX08_08090 PF00181 Ribosomal Proteins L2, RNA binding domain AAX08_08090 PF03947 Ribosomal Proteins L2, C-terminal domain AAX08_08095 PF00276 Ribosomal protein L23 AAX08_08100 PF00573 Ribosomal protein L4/L1 family AAX08_08105 PF00297 Ribosomal protein L3 AAX08_08110 PF00338 Ribosomal protein S10p/S20e AAX08_08115 PF00575 S1 RNA binding domain AAX08_08115 PF10150 Ribonuclease E/G family AAX08_08120 PF02545 Maf-like protein AAX08_08125 PF02686 Glu-tRNAGln amidotransferase C subunit AAX08_08130 PF01425 Amidase AAX08_08135 PF00583 Acetyltransferase (GNAT) family AAX08_08140 PF02637 GatB domain AAX08_08140 PF02934 GatB/GatE catalytic domain AAX08_08155 PF02146 Sir2 family AAX08_08160 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AAX08_08165 PF05299 M61 glycyl aminopeptidase AAX08_08185 PF01694 Rhomboid family AAX08_08190 PF00149 Calcineurin-like phosphoesterase AAX08_08195 PF00731 AIR carboxylase AAX08_08200 PF02222 ATP-grasp domain AAX08_08205 PF01844 HNH endonuclease AAX08_08210 PF00145 C-5 cytosine-specific DNA methylase AAX08_08215 PF01555 DNA methylase AAX08_08220 PF02639 AAX08_08220 AAX08_08225 PF01594 AAX08_08225 AAX08_08230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AAX08_08230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AAX08_08230 PF11890 Domain of unknown function (DUF3410) AAX08_08235 PF00152 tRNA synthetases class II (D, K and N) AAX08_08240 PF03328 HpcH/HpaI aldolase/citrate lyase family AAX08_08245 PF00994 Probable molybdopterin binding domain AAX08_08245 PF03453 MoeA N-terminal region (domain I and II) AAX08_08245 PF03454 MoeA C-terminal region (domain IV) AAX08_08250 PF13616 PPIC-type PPIASE domain AAX08_08255 PF02665 Nitrate reductase gamma subunit AAX08_08260 PF02613 Nitrate reductase delta subunit AAX08_08265 PF13247 4Fe-4S dicluster domain AAX08_08265 PF14711 Respiratory nitrate reductase beta C-terminal AAX08_08270 PF00384 Molybdopterin oxidoreductase AAX08_08270 PF01568 Molydopterin dinucleotide binding domain AAX08_08270 PF14710 Respiratory nitrate reductase alpha N-terminal AAX08_08275 PF00436 Single-strand binding protein family AAX08_08280 PF00107 Zinc-binding dehydrogenase AAX08_08280 PF08240 Alcohol dehydrogenase GroES-like domain AAX08_08285 PF00005 ABC transporter AAX08_08290 PF01467 Cytidylyltransferase AAX08_08295 PF02410 Oligomerisation domain AAX08_08300 PF00202 Aminotransferase class-III AAX08_08305 PF13500 AAA domain AAX08_08310 PF00293 NUDIX domain AAX08_08315 PF00293 NUDIX domain AAX08_08315 PF14803 Nudix N-terminal AAX08_08320 PF01432 Peptidase family M3 AAX08_08330 PF00009 Elongation factor Tu GTP binding domain AAX08_08330 PF03143 Elongation factor Tu C-terminal domain AAX08_08330 PF03144 Elongation factor Tu domain 2 AAX08_08335 PF00009 Elongation factor Tu GTP binding domain AAX08_08335 PF00679 Elongation factor G C-terminus AAX08_08335 PF03144 Elongation factor Tu domain 2 AAX08_08335 PF03764 Elongation factor G, domain IV AAX08_08335 PF14492 Elongation Factor G, domain II AAX08_08340 PF00177 Ribosomal protein S7p/S5e AAX08_08345 PF00164 Ribosomal protein S12/S23 AAX08_08350 PF12787 AAX08_08350 AAX08_08355 PF00109 Beta-ketoacyl synthase, N-terminal domain AAX08_08355 PF02801 Beta-ketoacyl synthase, C-terminal domain AAX08_08370 PF01381 Helix-turn-helix AAX08_08375 PF00425 chorismate binding enzyme AAX08_08380 PF00557 Metallopeptidase family M24 AAX08_08380 PF01321 Creatinase/Prolidase N-terminal domain AAX08_08380 PF16188 AAX08_08380 AAX08_08380 PF16189 AAX08_08380 AAX08_08385 PF07690 Major Facilitator Superfamily AAX08_08395 PF00795 Carbon-nitrogen hydrolase AAX08_08400 PF00571 CBS domain AAX08_08400 PF03471 Transporter associated domain AAX08_08410 PF01738 Dienelactone hydrolase family AAX08_08415 PF01546 Peptidase family M20/M25/M40 AAX08_08415 PF07687 Peptidase dimerisation domain AAX08_08420 PF08282 haloacid dehalogenase-like hydrolase AAX08_08430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AAX08_08430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_08435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AAX08_08435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AAX08_08440 PF00623 RNA polymerase Rpb1, domain 2 AAX08_08440 PF04983 RNA polymerase Rpb1, domain 3 AAX08_08440 PF04997 RNA polymerase Rpb1, domain 1 AAX08_08440 PF04998 RNA polymerase Rpb1, domain 5 AAX08_08440 PF05000 RNA polymerase Rpb1, domain 4 AAX08_08445 PF00562 RNA polymerase Rpb2, domain 6 AAX08_08445 PF04560 RNA polymerase Rpb2, domain 7 AAX08_08445 PF04561 RNA polymerase Rpb2, domain 2 AAX08_08445 PF04563 RNA polymerase beta subunit AAX08_08445 PF04565 RNA polymerase Rpb2, domain 3 AAX08_08445 PF10385 RNA polymerase beta subunit external 1 domain AAX08_08450 PF00542 Ribosomal protein L7/L12 C-terminal domain AAX08_08450 PF16320 AAX08_08450 AAX08_08455 PF00466 Ribosomal protein L10 AAX08_08460 PF00687 Ribosomal protein L1p/L10e family AAX08_08465 PF00298 Ribosomal protein L11, RNA binding domain AAX08_08465 PF03946 Ribosomal protein L11, N-terminal domain AAX08_08470 PF00467 KOW motif AAX08_08470 PF02357 Transcription termination factor nusG AAX08_08475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AAX08_08485 PF00009 Elongation factor Tu GTP binding domain AAX08_08485 PF03143 Elongation factor Tu C-terminal domain AAX08_08485 PF03144 Elongation factor Tu domain 2 AAX08_08490 PF04214 AAX08_08490 AAX08_08515 PF01168 Alanine racemase, N-terminal domain AAX08_08520 PF00842 Alanine racemase, C-terminal domain AAX08_08520 PF01168 Alanine racemase, N-terminal domain AAX08_08525 PF00425 chorismate binding enzyme AAX08_08525 PF04715 Anthranilate synthase component I, N terminal region AAX08_08530 PF02566 OsmC-like protein AAX08_08535 PF00476 DNA polymerase family A AAX08_08535 PF01367 5'-3' exonuclease, C-terminal SAM fold AAX08_08535 PF01612 3'-5' exonuclease AAX08_08535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AAX08_08545 PF08241 Methyltransferase domain AAX08_08550 PF09335 AAX08_08550 AAX08_08560 PF00009 Elongation factor Tu GTP binding domain AAX08_08560 PF03144 Elongation factor Tu domain 2 AAX08_08560 PF16658 AAX08_08560 AAX08_08565 PF01131 DNA topoisomerase AAX08_08565 PF01396 AAX08_08565 AAX08_08565 PF01751 Toprim domain AAX08_08565 PF08272 Topoisomerase I zinc-ribbon-like AAX08_08575 PF01580 FtsK/SpoIIIE family AAX08_08575 PF09397 Ftsk gamma domain AAX08_08575 PF13491 AAX08_08575 AAX08_08580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_08585 PF08238 Sel1 repeat AAX08_08590 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AAX08_08595 PF03486 HI0933-like protein AAX08_08600 PF01435 Peptidase family M48 AAX08_08605 PF01722 BolA-like protein AAX08_08615 PF00916 AAX08_08615 AAX08_08615 PF01740 STAS domain AAX08_08620 PF04273 Putative phosphatase (DUF442) AAX08_08625 PF00849 RNA pseudouridylate synthase AAX08_08630 PF00085 Thioredoxin AAX08_08635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AAX08_08635 PF07497 Rho termination factor, RNA-binding domain AAX08_08635 PF07498 Rho termination factor, N-terminal domain AAX08_08650 PF01043 SecA preprotein cross-linking domain AAX08_08650 PF02810 SEC-C motif AAX08_08650 PF07516 SecA Wing and Scaffold domain AAX08_08650 PF07517 SecA DEAD-like domain AAX08_08655 PF00202 Aminotransferase class-III AAX08_08660 PF03831 PhnA protein AAX08_08660 PF08274 PhnA Zinc-Ribbon AAX08_08665 PF01385 AAX08_08665 AAX08_08665 PF07282 AAX08_08665 AAX08_08670 PF00691 OmpA family AAX08_08690 PF02321 Outer membrane efflux protein AAX08_08700 PF13437 HlyD family secretion protein AAX08_08700 PF13533 Biotin-lipoyl like AAX08_08705 PF01571 Aminomethyltransferase folate-binding domain AAX08_08710 PF01266 FAD dependent oxidoreductase AAX08_08720 PF02666 AAX08_08720 AAX08_08730 PF02580 D-Tyr-tRNA(Tyr) deacylase AAX08_08735 PF00675 Insulinase (Peptidase family M16) AAX08_08735 PF05193 Peptidase M16 inactive domain AAX08_08735 PF08367 Peptidase M16C associated AAX08_08740 PF02092 AAX08_08740 AAX08_08740 PF05746 DALR anticodon binding domain AAX08_08750 PF02091 Glycyl-tRNA synthetase alpha subunit AAX08_08755 PF04024 AAX08_08755 AAX08_08760 PF13521 AAA domain AAX08_08765 PF04973 AAX08_08765 AAX08_08770 PF06127 AAX08_08770 AAX08_08775 PF01066 CDP-alcohol phosphatidyltransferase AAX08_08790 PF13443 Cro/C1-type HTH DNA-binding domain AAX08_08820 PF00145 C-5 cytosine-specific DNA methylase AAX08_08825 PF00817 impB/mucB/samB family AAX08_08825 PF11799 impB/mucB/samB family C-terminal domain AAX08_08825 PF13438 AAX08_08825 AAX08_08830 PF00717 Peptidase S24-like AAX08_08840 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB AAX08_08840 PF08479 POTRA domain, ShlB-type AAX08_08840 PF17287 AAX08_08840 AAX08_08845 PF13614 AAA domain AAX08_08865 PF13362 Toprim domain AAX08_08880 PF12762 AAX08_08880 AAX08_08885 PF07591 Pretoxin HINT domain AAX08_08890 PF00665 Integrase core domain AAX08_08890 PF13276 AAX08_08890 AAX08_08910 PF15586 AAX08_08910 AAX08_08915 PF13018 AAX08_08915 AAX08_08920 PF00589 Phage integrase family AAX08_08935 PF13443 Cro/C1-type HTH DNA-binding domain AAX08_08940 PF00545 ribonuclease AAX08_08940 PF04829 AAX08_08940 AAX08_08945 PF01337 Barstar (barnase inhibitor) AAX08_08960 PF04829 AAX08_08960 AAX08_08960 PF04830 AAX08_08960 AAX08_08995 PF14410 AAX08_08995 AAX08_09000 PF12796 Ankyrin repeats (3 copies) AAX08_09010 PF14206 AAX08_09010 AAX08_09020 PF07591 Pretoxin HINT domain AAX08_09025 PF00593 TonB dependent receptor AAX08_09025 PF07715 TonB-dependent Receptor Plug Domain AAX08_09030 PF00665 Integrase core domain AAX08_09040 PF15526 Putative toxin 46 AAX08_09055 PF13670 AAX08_09055 AAX08_09060 PF13520 Amino acid permease AAX08_09065 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AAX08_09070 PF00582 Universal stress protein family AAX08_09075 PF00294 pfkB family carbohydrate kinase AAX08_09080 PF01106 NifU-like domain AAX08_09080 PF01521 Iron-sulphur cluster biosynthesis AAX08_09085 PF00293 NUDIX domain AAX08_09085 PF01467 Cytidylyltransferase AAX08_09095 PF03616 AAX08_09095 AAX08_09100 PF02769 AIR synthase related protein, C-terminal domain AAX08_09100 PF13507 CobB/CobQ-like glutamine amidotransferase domain AAX08_09105 PF00072 Response regulator receiver domain AAX08_09105 PF00512 His Kinase A (phospho-acceptor) domain AAX08_09105 PF01627 Hpt domain AAX08_09105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_09110 PF05958 tRNA (Uracil-5-)-methyltransferase AAX08_09115 PF01925 AAX08_09115 AAX08_09125 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB AAX08_09130 PF00291 Pyridoxal-phosphate dependent enzyme AAX08_09135 PF00013 KH domain AAX08_09135 PF00575 S1 RNA binding domain AAX08_09135 PF01138 3' exoribonuclease family, domain 1 AAX08_09135 PF03725 3' exoribonuclease family, domain 2 AAX08_09135 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AAX08_09140 PF00312 Ribosomal protein S15 AAX08_09145 PF02462 Opacity family porin protein AAX08_09150 PF01509 TruB family pseudouridylate synthase (N terminal domain) AAX08_09150 PF09157 Pseudouridine synthase II TruB, C-terminal AAX08_09155 PF02033 Ribosome-binding factor A AAX08_09160 PF05239 PRC-barrel domain AAX08_09160 PF09557 AAX08_09160 AAX08_09165 PF09557 AAX08_09165 AAX08_09175 PF08529 NusA N-terminal domain AAX08_09175 PF13184 NusA-like KH domain AAX08_09175 PF14520 Helix-hairpin-helix domain AAX08_09180 PF02576 Uncharacterised BCR, YhbC family COG0779 AAX08_09180 PF17384 AAX08_09180 AAX08_09195 PF03840 Preprotein translocase SecG subunit AAX08_09200 PF00121 Triosephosphate isomerase AAX08_09205 PF00437 Type II/IV secretion system protein AAX08_09205 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AAX08_09210 PF00482 Type II secretion system (T2SS), protein F AAX08_09215 PF01478 Type IV leader peptidase family AAX08_09215 PF06750 AAX08_09215 AAX08_09220 PF01121 Dephospho-CoA kinase AAX08_09225 PF06041 Bacterial protein of unknown function (DUF924) AAX08_09230 PF13302 Acetyltransferase (GNAT) domain AAX08_09235 PF00873 AcrB/AcrD/AcrF family AAX08_09240 PF13437 HlyD family secretion protein AAX08_09240 PF13533 Biotin-lipoyl like AAX08_09245 PF00270 DEAD/DEAH box helicase AAX08_09245 PF00271 Helicase conserved C-terminal domain AAX08_09245 PF17191 AAX08_09245 AAX08_09250 PF01734 Patatin-like phospholipase AAX08_09255 PF00857 Isochorismatase family AAX08_09260 PF00583 Acetyltransferase (GNAT) family AAX08_09260 PF00696 Amino acid kinase family AAX08_09270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AAX08_09270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AAX08_09280 PF00005 ABC transporter AAX08_09280 PF12848 ABC transporter AAX08_09295 PF00108 Thiolase, N-terminal domain AAX08_09295 PF02803 Thiolase, C-terminal domain AAX08_09300 PF01144 Coenzyme A transferase AAX08_09305 PF01144 Coenzyme A transferase AAX08_09310 PF02667 AAX08_09310 AAX08_09315 PF00106 short chain dehydrogenase AAX08_09320 PF02447 AAX08_09320 AAX08_09325 PF06808 AAX08_09325 AAX08_09330 PF04290 AAX08_09330 AAX08_09335 PF03480 Bacterial extracellular solute-binding protein, family 7 AAX08_09340 PF00884 Sulfatase AAX08_09345 PF04055 Radical SAM superfamily AAX08_09345 PF13186 Iron-sulfur cluster-binding domain AAX08_09350 PF02798 Glutathione S-transferase, N-terminal domain AAX08_09350 PF14497 Glutathione S-transferase, C-terminal domain AAX08_09355 PF01557 Fumarylacetoacetate (FAA) hydrolase family AAX08_09360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AAX08_09365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_09365 PF03466 LysR substrate binding domain AAX08_09370 PF13091 PLD-like domain AAX08_09375 PF00351 Biopterin-dependent aromatic amino acid hydroxylase AAX08_09380 PF01329 Pterin 4 alpha carbinolamine dehydratase AAX08_09385 PF03553 AAX08_09385 AAX08_09390 PF07690 Major Facilitator Superfamily AAX08_09395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AAX08_09395 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal AAX08_09400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_09400 PF03466 LysR substrate binding domain AAX08_09405 PF14542 GCN5-related N-acetyl-transferase AAX08_09410 PF00571 CBS domain AAX08_09410 PF03445 AAX08_09410 AAX08_09410 PF10335 AAX08_09410 AAX08_09415 PF00929 Exonuclease AAX08_09420 PF01329 Pterin 4 alpha carbinolamine dehydratase AAX08_09425 PF03070 TENA/THI-4/PQQC family AAX08_09430 PF00521 DNA gyrase/topoisomerase IV, subunit A AAX08_09430 PF03989 DNA gyrase C-terminal domain, beta-propeller AAX08_09445 PF01259 SAICAR synthetase AAX08_09455 PF00701 Dihydrodipicolinate synthetase family AAX08_09460 PF00595 PDZ domain (Also known as DHR or GLGF) AAX08_09460 PF13180 PDZ domain AAX08_09460 PF13365 Trypsin-like peptidase domain AAX08_09465 PF02223 Thymidylate kinase AAX08_09470 PF02618 YceG-like family AAX08_09475 PF01063 Aminotransferase class IV AAX08_09485 PF01488 Shikimate / quinate 5-dehydrogenase AAX08_09485 PF08501 Shikimate dehydrogenase substrate binding domain AAX08_09490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AAX08_09490 PF02770 Acyl-CoA dehydrogenase, middle domain AAX08_09490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AAX08_09490 PF12418 AAX08_09490 AAX08_09490 PF12806 AAX08_09490 AAX08_09495 PF08238 Sel1 repeat AAX08_09500 PF00171 Aldehyde dehydrogenase family AAX08_09505 PF00005 ABC transporter AAX08_09510 PF00497 Bacterial extracellular solute-binding proteins, family 3 AAX08_09515 PF00497 Bacterial extracellular solute-binding proteins, family 3 AAX08_09520 PF00497 Bacterial extracellular solute-binding proteins, family 3 AAX08_09525 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_09530 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_09550 PF00440 Bacterial regulatory proteins, tetR family AAX08_09560 PF01430 Hsp33 protein AAX08_09570 PF07992 Pyridine nucleotide-disulphide oxidoreductase AAX08_09575 PF13379 NMT1-like family AAX08_09580 PF00528 Binding-protein-dependent transport system inner membrane component AAX08_09585 PF00005 ABC transporter AAX08_09590 PF01380 SIS domain AAX08_09590 PF13522 Glutamine amidotransferase domain AAX08_09595 PF03372 Endonuclease/Exonuclease/phosphatase family AAX08_09605 PF01432 Peptidase family M3 AAX08_09610 PF09526 AAX08_09610 AAX08_09615 PF01243 Pyridoxamine 5'-phosphate oxidase AAX08_09615 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AAX08_09620 PF01553 Acyltransferase AAX08_09625 PF13622 Thioesterase-like superfamily AAX08_09630 PF07759 AAX08_09630 AAX08_09635 PF02492 CobW/HypB/UreG, nucleotide-binding domain AAX08_09635 PF07683 Cobalamin synthesis protein cobW C-terminal domain AAX08_09640 PF02016 LD-carboxypeptidase AAX08_09645 PF00571 CBS domain AAX08_09645 PF01595 AAX08_09645 AAX08_09645 PF03471 Transporter associated domain AAX08_09650 PF00106 short chain dehydrogenase AAX08_09655 PF13419 Haloacid dehalogenase-like hydrolase AAX08_09660 PF13489 Methyltransferase domain AAX08_09665 PF01323 DSBA-like thioredoxin domain AAX08_09670 PF04751 Protein of unknown function (DUF615) AAX08_09675 PF03668 AAX08_09675 AAX08_09680 PF02569 Pantoate-beta-alanine ligase AAX08_09685 PF02548 Ketopantoate hydroxymethyltransferase AAX08_09690 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AAX08_09695 PF01743 Poly A polymerase head domain AAX08_09695 PF12626 Polymerase A arginine-rich C-terminus AAX08_09695 PF12627 Probable RNA and SrmB- binding site of polymerase A AAX08_09700 PF12836 Helix-hairpin-helix motif AAX08_09705 PF03819 MazG nucleotide pyrophosphohydrolase domain AAX08_09710 PF00291 Pyridoxal-phosphate dependent enzyme AAX08_09715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AAX08_09715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AAX08_09715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AAX08_09715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AAX08_09720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AAX08_09720 PF03466 LysR substrate binding domain AAX08_09725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AAX08_09725 PF02770 Acyl-CoA dehydrogenase, middle domain AAX08_09725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AAX08_09730 PF02515 CoA-transferase family III AAX08_09735 PF16868 AAX08_09735 AAX08_09740 PF01145 SPFH domain / Band 7 family AAX08_09745 PF01957 NfeD-like C-terminal, partner-binding AAX08_09755 PF01553 Acyltransferase AAX08_09760 PF00204 DNA gyrase B AAX08_09760 PF00986 DNA gyrase B subunit, carboxyl terminus AAX08_09760 PF01751 Toprim domain AAX08_09760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_09770 PF13387 AAX08_09770 AAX08_09785 PF00593 TonB dependent receptor AAX08_09785 PF07715 TonB-dependent Receptor Plug Domain AAX08_09790 PF01298 Transferrin binding protein-like solute binding protein AAX08_09790 PF17483 AAX08_09790 AAX08_09790 PF17484 AAX08_09790 AAX08_09795 PF05728 Uncharacterised protein family (UPF0227) AAX08_09800 PF06945 AAX08_09800 AAX08_09805 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AAX08_09815 PF07866 Protein of unknown function (DUF1653) AAX08_09820 PF00300 Histidine phosphatase superfamily (branch 1) AAX08_09830 PF00579 tRNA synthetases class I (W and Y) AAX08_09830 PF01479 S4 domain AAX08_09835 PF04262 Glutamate-cysteine ligase AAX08_09840 PF02600 Disulfide bond formation protein DsbB AAX08_09845 PF01225 Mur ligase family, catalytic domain AAX08_09845 PF02875 Mur ligase family, glutamate ligase domain AAX08_09845 PF08245 Mur ligase middle domain AAX08_09850 PF13279 Thioesterase-like superfamily AAX08_09855 PF04362 Bacterial Fe(2+) trafficking AAX08_09860 PF00206 Lyase AAX08_09860 PF14698 Argininosuccinate lyase C-terminal AAX08_09865 PF04397 LytTr DNA-binding domain AAX08_09870 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AAX08_09870 PF03900 Porphobilinogen deaminase, C-terminal domain AAX08_09875 PF02602 Uroporphyrinogen-III synthase HemD AAX08_09880 PF01025 GrpE AAX08_09885 PF00012 Hsp70 protein AAX08_09890 PF00072 Response regulator receiver domain AAX08_09890 PF00486 Transcriptional regulatory protein, C terminal AAX08_09895 PF13936 Helix-turn-helix domain AAX08_09900 PF01144 Coenzyme A transferase AAX08_09900 PF03594 AAX08_09900 AAX08_09915 PF00924 Mechanosensitive ion channel AAX08_09930 PF00753 Metallo-beta-lactamase superfamily AAX08_09935 PF00512 His Kinase A (phospho-acceptor) domain AAX08_09935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AAX08_09940 PF06123 AAX08_09940 AAX08_09945 PF04400 AAX08_09945 AAX08_09950 PF00588 SpoU rRNA Methylase family AAX08_09950 PF08032 RNA 2'-O ribose methyltransferase substrate binding AAX08_09955 PF02463 RecF/RecN/SMC N terminal domain AAX08_09960 PF02622 Uncharacterized ACR, COG1678 AAX08_09965 PF03652 Uncharacterised protein family (UPF0081) AAX08_09975 PF01206 Sulfurtransferase TusA AAX08_09980 PF00589 Phage integrase family AAX08_09980 PF02899 Phage integrase, N-terminal SAM-like domain AAX08_09985 PF05175 Methyltransferase small domain AAX08_09990 PF01966 HD domain AAX08_10000 PF00501 AMP-binding enzyme AAX08_10000 PF13193 AMP-binding enzyme C-terminal domain AAX08_10005 PF00440 Bacterial regulatory proteins, tetR family AAX08_10015 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AAX08_10015 PF02770 Acyl-CoA dehydrogenase, middle domain AAX08_10015 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AAX08_10060 PF13622 Thioesterase-like superfamily AAX08_10075 PF00004 ATPase family associated with various cellular activities (AAA) AAX08_10075 PF12002 MgsA AAA+ ATPase C terminal AAX08_10075 PF16193 AAX08_10075 AAX08_10080 PF07690 Major Facilitator Superfamily AAX08_10085 PF10786 AAX08_10085 AAX08_10090 PF00925 GTP cyclohydrolase II AAX08_10090 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AAX08_10095 PF04226 AAX08_10095 AAX08_10100 PF01300 Telomere recombination AAX08_10105 PF02481 DNA recombination-mediator protein A AAX08_10110 PF00291 Pyridoxal-phosphate dependent enzyme AAX08_10110 PF14821 Threonine synthase N terminus AAX08_10115 PF01029 NusB family AAX08_10115 PF01189 NOL1/NOP2/sun family AAX08_10120 PF00551 Formyl transferase AAX08_10120 PF02911 Formyl transferase, C-terminal domain AAX08_10125 PF00677 Lumazine binding domain AAX08_10130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AAX08_10130 PF01872 RibD C-terminal domain AAX08_10135 PF03477 ATP cone domain AAX08_10140 PF01926 50S ribosome-binding GTPase AAX08_10140 PF10396 GTP-binding protein TrmE N-terminus AAX08_10140 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE AAX08_10145 PF02096 60Kd inner membrane protein AAX08_10145 PF14849 YidC periplasmic domain AAX08_10150 PF01809 AAX08_10150 AAX08_10155 PF00825 Ribonuclease P AAX08_10160 PF00468 Ribosomal protein L34