JDM601_0015	PWY-5958	acridone alkaloid biosynthesis
JDM601_0015	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JDM601_0015	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JDM601_0018	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_0018	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_0018	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_0018	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_0068	PWY-7533	gliotoxin biosynthesis
JDM601_0070	PWY-723	alkylnitronates degradation
JDM601_0149	PWY-3162	L-tryptophan degradation V (side chain pathway)
JDM601_0149	PWY-5057	L-valine degradation II
JDM601_0149	PWY-5076	L-leucine degradation III
JDM601_0149	PWY-5078	L-isoleucine degradation II
JDM601_0149	PWY-5079	L-phenylalanine degradation III
JDM601_0149	PWY-5082	L-methionine degradation III
JDM601_0149	PWY-5480	pyruvate fermentation to ethanol I
JDM601_0149	PWY-5486	pyruvate fermentation to ethanol II
JDM601_0149	PWY-5751	phenylethanol biosynthesis
JDM601_0149	PWY-6313	serotonin degradation
JDM601_0149	PWY-6333	acetaldehyde biosynthesis I
JDM601_0149	PWY-6342	noradrenaline and adrenaline degradation
JDM601_0149	PWY-6587	pyruvate fermentation to ethanol III
JDM601_0149	PWY-6802	salidroside biosynthesis
JDM601_0149	PWY-6871	3-methylbutanol biosynthesis
JDM601_0149	PWY-7013	L-1,2-propanediol degradation
JDM601_0149	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_0149	PWY-7118	chitin degradation to ethanol
JDM601_0149	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_0156	PWY-5101	L-isoleucine biosynthesis II
JDM601_0156	PWY-5103	L-isoleucine biosynthesis III
JDM601_0156	PWY-5104	L-isoleucine biosynthesis IV
JDM601_0156	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_0174	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JDM601_0182	PWY-5741	ethylmalonyl-CoA pathway
JDM601_0182	PWY-5744	glyoxylate assimilation
JDM601_0182	PWY-6728	methylaspartate cycle
JDM601_0182	PWY-7854	JDM601_0182
JDM601_0213	PWY-7731	JDM601_0213
JDM601_0215	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_0215	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_0215	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_0215	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_0215	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_0215	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_0215	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_0215	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JDM601_0218	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JDM601_0234	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_0234	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JDM601_0234	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JDM601_0234	PWY-5690	TCA cycle II (plants and fungi)
JDM601_0234	PWY-6728	methylaspartate cycle
JDM601_0234	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_0234	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_0234	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_0239	PWY-6683	sulfate reduction III (assimilatory)
JDM601_0240	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0240	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JDM601_0243	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JDM601_0259	PWY-5303	thiosulfate oxidation II (via tetrathionate)
JDM601_0268	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JDM601_0272	PWY-5704	urea degradation II
JDM601_0273	PWY-5704	urea degradation II
JDM601_0274	PWY-5704	urea degradation II
JDM601_0303	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JDM601_0327	PWY-3221	dTDP-L-rhamnose biosynthesis II
JDM601_0327	PWY-6808	dTDP-D-forosamine biosynthesis
JDM601_0327	PWY-6942	dTDP-D-desosamine biosynthesis
JDM601_0327	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JDM601_0327	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JDM601_0327	PWY-6974	dTDP-L-olivose biosynthesis
JDM601_0327	PWY-6976	dTDP-L-mycarose biosynthesis
JDM601_0327	PWY-7104	dTDP-L-megosamine biosynthesis
JDM601_0327	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JDM601_0327	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JDM601_0327	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JDM601_0327	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JDM601_0327	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JDM601_0327	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JDM601_0327	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JDM601_0327	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JDM601_0327	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
JDM601_0327	PWY-7688	JDM601_0327
JDM601_0327	PWY-7814	JDM601_0327
JDM601_0351	PWY-5686	UMP biosynthesis
JDM601_0351	PWY-7790	JDM601_0351
JDM601_0351	PWY-7791	JDM601_0351
JDM601_0357	PWY-1042	glycolysis IV (plant cytosol)
JDM601_0357	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_0357	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_0357	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_0357	PWY-7385	1,3-propanediol biosynthesis (engineered)
JDM601_0363	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_0385	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JDM601_0385	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JDM601_0385	PWY-6897	thiamin salvage II
JDM601_0385	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JDM601_0385	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JDM601_0385	PWY-7356	thiamin salvage IV (yeast)
JDM601_0385	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JDM601_0386	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_0386	PWY-7806	JDM601_0386
JDM601_0388	PWY-6891	thiazole biosynthesis II (Bacillus)
JDM601_0388	PWY-6892	thiazole biosynthesis I (E. coli)
JDM601_0394	PWY-6910	hydroxymethylpyrimidine salvage
JDM601_0394	PWY-7356	thiamin salvage IV (yeast)
JDM601_0394	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
JDM601_0395	PWY-6890	4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
JDM601_0406	PWY-6854	ethylene biosynthesis III (microbes)
JDM601_0407	PWY-6840	homoglutathione biosynthesis
JDM601_0407	PWY-7255	ergothioneine biosynthesis I (bacteria)
JDM601_0419	PWY-3461	L-tyrosine biosynthesis II
JDM601_0419	PWY-3462	L-phenylalanine biosynthesis II
JDM601_0419	PWY-6120	L-tyrosine biosynthesis III
JDM601_0419	PWY-6627	salinosporamide A biosynthesis
JDM601_0419	PWY-7626	bacilysin biosynthesis
JDM601_0420	PWY-5669	phosphatidylethanolamine biosynthesis I
JDM601_0421	PWY-5669	phosphatidylethanolamine biosynthesis I
JDM601_0422	PWY-6823	molybdenum cofactor biosynthesis
JDM601_0432	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_0432	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_0433	PWY-6269	adenosylcobalamin salvage from cobinamide II
JDM601_0433	PWY-7962	JDM601_0433
JDM601_0433	PWY-7971	JDM601_0433
JDM601_0433	PWY-7972	JDM601_0433
JDM601_0450	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
JDM601_0450	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JDM601_0458	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_0459	PWY-1361	benzoyl-CoA degradation I (aerobic)
JDM601_0459	PWY-5109	2-methylbutanoate biosynthesis
JDM601_0459	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JDM601_0459	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JDM601_0459	PWY-5177	glutaryl-CoA degradation
JDM601_0459	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_0459	PWY-6435	4-hydroxybenzoate biosynthesis V
JDM601_0459	PWY-6583	pyruvate fermentation to butanol I
JDM601_0459	PWY-6863	pyruvate fermentation to hexanol
JDM601_0459	PWY-6883	pyruvate fermentation to butanol II
JDM601_0459	PWY-6944	androstenedione degradation
JDM601_0459	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JDM601_0459	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JDM601_0459	PWY-7007	methyl ketone biosynthesis
JDM601_0459	PWY-7046	4-coumarate degradation (anaerobic)
JDM601_0459	PWY-7094	fatty acid salvage
JDM601_0459	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JDM601_0459	PWY-735	jasmonic acid biosynthesis
JDM601_0459	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JDM601_0459	PWY-7606	docosahexaenoate biosynthesis III (mammals)
JDM601_0459	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
JDM601_0459	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
JDM601_0459	PWY-7726	JDM601_0459
JDM601_0459	PWY-7778	JDM601_0459
JDM601_0459	PWY-7779	JDM601_0459
JDM601_0466	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
JDM601_0471	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_0471	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_0471	PWY-7953	JDM601_0471
JDM601_0477	PWY-1622	formaldehyde assimilation I (serine pathway)
JDM601_0477	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_0481	PWY-4381	fatty acid biosynthesis initiation I
JDM601_0485	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JDM601_0495	PWY-3341	L-proline biosynthesis III
JDM601_0495	PWY-4981	L-proline biosynthesis II (from arginine)
JDM601_0495	PWY-6344	L-ornithine degradation II (Stickland reaction)
JDM601_0504	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0505	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0505	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JDM601_0506	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0506	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JDM601_0507	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0507	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
JDM601_0522	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_0531	PWY-5839	menaquinol-7 biosynthesis
JDM601_0531	PWY-5851	demethylmenaquinol-9 biosynthesis
JDM601_0531	PWY-5852	demethylmenaquinol-8 biosynthesis I
JDM601_0531	PWY-5853	demethylmenaquinol-6 biosynthesis I
JDM601_0531	PWY-5890	menaquinol-10 biosynthesis
JDM601_0531	PWY-5891	menaquinol-11 biosynthesis
JDM601_0531	PWY-5892	menaquinol-12 biosynthesis
JDM601_0531	PWY-5895	menaquinol-13 biosynthesis
JDM601_0541	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JDM601_0545	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JDM601_0549	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JDM601_0552	PWY-5839	menaquinol-7 biosynthesis
JDM601_0552	PWY-5844	menaquinol-9 biosynthesis
JDM601_0552	PWY-5849	menaquinol-6 biosynthesis
JDM601_0552	PWY-5890	menaquinol-10 biosynthesis
JDM601_0552	PWY-5891	menaquinol-11 biosynthesis
JDM601_0552	PWY-5892	menaquinol-12 biosynthesis
JDM601_0552	PWY-5895	menaquinol-13 biosynthesis
JDM601_0559	PWY-5667	CDP-diacylglycerol biosynthesis I
JDM601_0559	PWY-5981	CDP-diacylglycerol biosynthesis III
JDM601_0559	PWY-7902	JDM601_0559
JDM601_0566	PWY-6317	galactose degradation I (Leloir pathway)
JDM601_0566	PWY-6527	stachyose degradation
JDM601_0567	PWY-3821	galactose degradation III
JDM601_0567	PWY-6317	galactose degradation I (Leloir pathway)
JDM601_0567	PWY-6527	stachyose degradation
JDM601_0646	PWY-1042	glycolysis IV (plant cytosol)
JDM601_0646	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_0646	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_0646	PWY-7385	1,3-propanediol biosynthesis (engineered)
JDM601_0707	PWY-4381	fatty acid biosynthesis initiation I
JDM601_0707	PWY-5743	3-hydroxypropanoate cycle
JDM601_0707	PWY-5744	glyoxylate assimilation
JDM601_0707	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_0707	PWY-6722	candicidin biosynthesis
JDM601_0785	PWY-1361	benzoyl-CoA degradation I (aerobic)
JDM601_0785	PWY-5109	2-methylbutanoate biosynthesis
JDM601_0785	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JDM601_0785	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
JDM601_0785	PWY-5177	glutaryl-CoA degradation
JDM601_0785	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_0785	PWY-6435	4-hydroxybenzoate biosynthesis V
JDM601_0785	PWY-6583	pyruvate fermentation to butanol I
JDM601_0785	PWY-6863	pyruvate fermentation to hexanol
JDM601_0785	PWY-6883	pyruvate fermentation to butanol II
JDM601_0785	PWY-6944	androstenedione degradation
JDM601_0785	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
JDM601_0785	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
JDM601_0785	PWY-7007	methyl ketone biosynthesis
JDM601_0785	PWY-7046	4-coumarate degradation (anaerobic)
JDM601_0785	PWY-7094	fatty acid salvage
JDM601_0785	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
JDM601_0785	PWY-735	jasmonic acid biosynthesis
JDM601_0785	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
JDM601_0785	PWY-7606	docosahexaenoate biosynthesis III (mammals)
JDM601_0785	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
JDM601_0785	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
JDM601_0785	PWY-7726	JDM601_0785
JDM601_0785	PWY-7778	JDM601_0785
JDM601_0785	PWY-7779	JDM601_0785
JDM601_0788	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_0788	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_0792	PWY-6823	molybdenum cofactor biosynthesis
JDM601_0794	PWY-6823	molybdenum cofactor biosynthesis
JDM601_0794	PWY-7887	JDM601_0794
JDM601_0797	PWY-6823	molybdenum cofactor biosynthesis
JDM601_0814	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_0814	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_0826	PWY-4381	fatty acid biosynthesis initiation I
JDM601_0826	PWY-5743	3-hydroxypropanoate cycle
JDM601_0826	PWY-5744	glyoxylate assimilation
JDM601_0826	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_0826	PWY-6722	candicidin biosynthesis
JDM601_0845	PWY-7352	daunorubicin biosynthesis
JDM601_0845	PWY-7354	aclacinomycin biosynthesis
JDM601_0850	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_0850	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_0875	PWY-2941	L-lysine biosynthesis II
JDM601_0875	PWY-2942	L-lysine biosynthesis III
JDM601_0875	PWY-5097	L-lysine biosynthesis VI
JDM601_0892	PWY-3801	sucrose degradation II (sucrose synthase)
JDM601_0892	PWY-5054	sorbitol biosynthesis I
JDM601_0892	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
JDM601_0892	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JDM601_0892	PWY-5659	GDP-mannose biosynthesis
JDM601_0892	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_0892	PWY-621	sucrose degradation III (sucrose invertase)
JDM601_0892	PWY-622	starch biosynthesis
JDM601_0892	PWY-6981	chitin biosynthesis
JDM601_0892	PWY-6992	1,5-anhydrofructose degradation
JDM601_0892	PWY-7238	sucrose biosynthesis II
JDM601_0892	PWY-7347	sucrose biosynthesis III
JDM601_0892	PWY-7385	1,3-propanediol biosynthesis (engineered)
JDM601_0893	PWY-3461	L-tyrosine biosynthesis II
JDM601_0893	PWY-3462	L-phenylalanine biosynthesis II
JDM601_0893	PWY-6120	L-tyrosine biosynthesis III
JDM601_0893	PWY-6627	salinosporamide A biosynthesis
JDM601_0893	PWY-7626	bacilysin biosynthesis
JDM601_0897	PWY-5392	reductive TCA cycle II
JDM601_0897	PWY-5537	pyruvate fermentation to acetate V
JDM601_0897	PWY-5538	pyruvate fermentation to acetate VI
JDM601_0897	PWY-5690	TCA cycle II (plants and fungi)
JDM601_0897	PWY-5913	TCA cycle VI (obligate autotrophs)
JDM601_0897	PWY-6728	methylaspartate cycle
JDM601_0897	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_0897	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JDM601_0898	PWY-5392	reductive TCA cycle II
JDM601_0898	PWY-5537	pyruvate fermentation to acetate V
JDM601_0898	PWY-5538	pyruvate fermentation to acetate VI
JDM601_0898	PWY-5690	TCA cycle II (plants and fungi)
JDM601_0898	PWY-5913	TCA cycle VI (obligate autotrophs)
JDM601_0898	PWY-6728	methylaspartate cycle
JDM601_0898	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_0898	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JDM601_0904	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_0904	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
JDM601_0905	PWY-6123	inosine-5'-phosphate biosynthesis I
JDM601_0905	PWY-6124	inosine-5'-phosphate biosynthesis II
JDM601_0905	PWY-7234	inosine-5'-phosphate biosynthesis III
JDM601_0928	PWY-4381	fatty acid biosynthesis initiation I
JDM601_0928	PWY-5743	3-hydroxypropanoate cycle
JDM601_0928	PWY-5744	glyoxylate assimilation
JDM601_0928	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_0928	PWY-6722	candicidin biosynthesis
JDM601_0942	PWY-6823	molybdenum cofactor biosynthesis
JDM601_0957	PWY-7921	JDM601_0957
JDM601_0957	PWY-7922	JDM601_0957
JDM601_0957	PWY-7979	JDM601_0957
JDM601_0958	PWY-5958	acridone alkaloid biosynthesis
JDM601_0958	PWY-6543	4-aminobenzoate biosynthesis
JDM601_0958	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JDM601_0958	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JDM601_0969	PWY-7560	methylerythritol phosphate pathway II
JDM601_0971	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
JDM601_0979	PWY-4202	arsenate detoxification I (glutaredoxin)
JDM601_0979	PWY-4621	arsenate detoxification II (glutaredoxin)
JDM601_0981	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JDM601_0988	PWY-1042	glycolysis IV (plant cytosol)
JDM601_0988	PWY-1622	formaldehyde assimilation I (serine pathway)
JDM601_0988	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JDM601_0988	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_0988	PWY-5723	Rubisco shunt
JDM601_0988	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_0988	PWY-6886	1-butanol autotrophic biosynthesis
JDM601_0988	PWY-6901	superpathway of glucose and xylose degradation
JDM601_0988	PWY-7003	glycerol degradation to butanol
JDM601_0988	PWY-7124	ethylene biosynthesis V (engineered)
JDM601_0988	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JDM601_1010	PWY-2941	L-lysine biosynthesis II
JDM601_1010	PWY-2942	L-lysine biosynthesis III
JDM601_1010	PWY-5097	L-lysine biosynthesis VI
JDM601_1013	PWY-5331	taurine biosynthesis
JDM601_1023	PWY-801	L-homocysteine and L-cysteine interconversion
JDM601_1037	PWY-3961	phosphopantothenate biosynthesis II
JDM601_1039	PWY-1622	formaldehyde assimilation I (serine pathway)
JDM601_1039	PWY-181	photorespiration
JDM601_1039	PWY-2161	folate polyglutamylation
JDM601_1039	PWY-2201	folate transformations I
JDM601_1039	PWY-3661	glycine betaine degradation I
JDM601_1039	PWY-3661-1	glycine betaine degradation II (mammalian)
JDM601_1039	PWY-3841	folate transformations II
JDM601_1039	PWY-5497	purine nucleobases degradation II (anaerobic)
JDM601_1050	PWY-5392	reductive TCA cycle II
JDM601_1050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JDM601_1050	PWY-5690	TCA cycle II (plants and fungi)
JDM601_1050	PWY-5913	TCA cycle VI (obligate autotrophs)
JDM601_1050	PWY-6728	methylaspartate cycle
JDM601_1050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_1050	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_1050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JDM601_1051	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_1060	PWY-7560	methylerythritol phosphate pathway II
JDM601_1081	PWY-5747	2-methylcitrate cycle II
JDM601_1087	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JDM601_1087	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
JDM601_1087	PWY-6936	seleno-amino acid biosynthesis
JDM601_1087	PWY-702	L-methionine biosynthesis II
JDM601_1124	PWY-723	alkylnitronates degradation
JDM601_1140	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_1140	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_1146	PWY-7158	L-phenylalanine degradation V
JDM601_1149	PWY-6748	nitrate reduction VII (denitrification)
JDM601_1150	PWY-6748	nitrate reduction VII (denitrification)
JDM601_1169	PWY-6019	pseudouridine degradation
JDM601_1170	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_1170	PWY-4521	arsenite oxidation I (respiratory)
JDM601_1170	PWY-6692	Fe(II) oxidation
JDM601_1170	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_1182	PWY-6614	tetrahydrofolate biosynthesis
JDM601_1187	PWY-7900	JDM601_1187
JDM601_1188	PWY-622	starch biosynthesis
JDM601_1188	PWY-7902	JDM601_1188
JDM601_1190	PWY-6825	phosphatidylcholine biosynthesis V
JDM601_1212	PWY-1622	formaldehyde assimilation I (serine pathway)
JDM601_1212	PWY-5392	reductive TCA cycle II
JDM601_1212	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JDM601_1212	PWY-5690	TCA cycle II (plants and fungi)
JDM601_1212	PWY-5913	TCA cycle VI (obligate autotrophs)
JDM601_1212	PWY-6728	methylaspartate cycle
JDM601_1212	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_1212	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JDM601_1212	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JDM601_1216	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
JDM601_1278	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JDM601_1278	PWY-5743	3-hydroxypropanoate cycle
JDM601_1278	PWY-5744	glyoxylate assimilation
JDM601_1278	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_1278	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_1278	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JDM601_1278	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JDM601_1279	PWY-5278	sulfite oxidation III
JDM601_1279	PWY-5340	sulfate activation for sulfonation
JDM601_1279	PWY-6683	sulfate reduction III (assimilatory)
JDM601_1279	PWY-6932	selenate reduction
JDM601_1280	PWY-5278	sulfite oxidation III
JDM601_1280	PWY-5340	sulfate activation for sulfonation
JDM601_1280	PWY-6683	sulfate reduction III (assimilatory)
JDM601_1280	PWY-6932	selenate reduction
JDM601_1292	PWY-2941	L-lysine biosynthesis II
JDM601_1292	PWY-2942	L-lysine biosynthesis III
JDM601_1292	PWY-5097	L-lysine biosynthesis VI
JDM601_1295	PWY-702	L-methionine biosynthesis II
JDM601_1296	PWY-7980	JDM601_1296
JDM601_1301	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_1301	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_1301	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_1307	PWY-7980	JDM601_1307
JDM601_1309	PWY-7980	JDM601_1309
JDM601_1313	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_1313	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_1313	PWY-7953	JDM601_1313
JDM601_1325	PWY-5741	ethylmalonyl-CoA pathway
JDM601_1325	PWY-5743	3-hydroxypropanoate cycle
JDM601_1325	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_1325	PWY-6728	methylaspartate cycle
JDM601_1325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JDM601_1325	PWY-7854	JDM601_1325
JDM601_1328	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JDM601_1328	PWY-622	starch biosynthesis
JDM601_1328	PWY-7900	JDM601_1328
JDM601_1329	PWY-7900	JDM601_1329
JDM601_1330	PWY-5941	glycogen degradation II (eukaryotic)
JDM601_1330	PWY-6731	starch degradation III
JDM601_1330	PWY-6737	starch degradation V
JDM601_1330	PWY-7238	sucrose biosynthesis II
JDM601_1336	PWY-5381	pyridine nucleotide cycling (plants)
JDM601_1339	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1341	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_1341	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_1383	PWY-4381	fatty acid biosynthesis initiation I
JDM601_1383	PWY-5142	acyl-ACP thioesterase pathway
JDM601_1383	PWY-5147	oleate biosynthesis I (plants)
JDM601_1383	PWY-5366	palmitoleate biosynthesis II (plants and bacteria)
JDM601_1383	PWY-5367	petroselinate biosynthesis
JDM601_1383	PWY-5966	fatty acid biosynthesis initiation II
JDM601_1383	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JDM601_1383	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JDM601_1383	PWY-5989	stearate biosynthesis II (bacteria and plants)
JDM601_1383	PWY-5994	palmitate biosynthesis I (animals and fungi)
JDM601_1383	PWY-6113	superpathway of mycolate biosynthesis
JDM601_1383	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JDM601_1383	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JDM601_1383	PWY-6799	fatty acid biosynthesis (plant mitochondria)
JDM601_1383	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
JDM601_1383	PWY-7663	gondoate biosynthesis (anaerobic)
JDM601_1383	PWY-7664	oleate biosynthesis IV (anaerobic)
JDM601_1383	PWY-7723	JDM601_1383
JDM601_1383	PWY-7746	JDM601_1383
JDM601_1383	PWY-7858	JDM601_1383
JDM601_1383	PWYG-321	mycolate biosynthesis
JDM601_1384	PWY-6012	acyl carrier protein metabolism I
JDM601_1384	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JDM601_1384	PWY-6289	petrobactin biosynthesis
JDM601_1403	PWY-4381	fatty acid biosynthesis initiation I
JDM601_1403	PWY-5743	3-hydroxypropanoate cycle
JDM601_1403	PWY-5744	glyoxylate assimilation
JDM601_1403	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_1403	PWY-6722	candicidin biosynthesis
JDM601_1409	PWY-6654	phosphopantothenate biosynthesis III
JDM601_1416	PWY-6523	nitrite-dependent anaerobic methane oxidation
JDM601_1416	PWY-6748	nitrate reduction VII (denitrification)
JDM601_1416	PWY-7084	nitrifier denitrification
JDM601_1425	PWY-5667	CDP-diacylglycerol biosynthesis I
JDM601_1425	PWY-6453	stigma estolide biosynthesis
JDM601_1425	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
JDM601_1425	PWY-7587	oleate biosynthesis III (cyanobacteria)
JDM601_1432	PWY-5022	4-aminobutanoate degradation V
JDM601_1432	PWY-6728	methylaspartate cycle
JDM601_1432	PWY-7126	ethylene biosynthesis IV
JDM601_1452	PWY-5392	reductive TCA cycle II
JDM601_1452	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_1454	PWY-5964	guanylyl molybdenum cofactor biosynthesis
JDM601_1454	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
JDM601_1460	PWY-2161	folate polyglutamylation
JDM601_1462	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_1462	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JDM601_1462	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_1462	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_1462	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JDM601_1462	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_1462	PWY-7205	CMP phosphorylation
JDM601_1462	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_1462	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_1462	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_1462	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_1462	PWY-7224	purine deoxyribonucleosides salvage
JDM601_1462	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_1462	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JDM601_1468	PWY-3341	L-proline biosynthesis III
JDM601_1468	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JDM601_1476	PWY-5381	pyridine nucleotide cycling (plants)
JDM601_1476	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JDM601_1476	PWY-7761	JDM601_1476
JDM601_1481	PWY-3341	L-proline biosynthesis III
JDM601_1481	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
JDM601_1487	PWY-5381	pyridine nucleotide cycling (plants)
JDM601_1487	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JDM601_1487	PWY-7761	JDM601_1487
JDM601_1517	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JDM601_1519	PWY-6683	sulfate reduction III (assimilatory)
JDM601_1547	PWY-4261	glycerol degradation I
JDM601_1560	PWY-5350	thiosulfate disproportionation III (rhodanese)
JDM601_1560	PWY-7927	JDM601_1560
JDM601_1562	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JDM601_1578	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
JDM601_1578	PWY-6837	fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)
JDM601_1578	PWY-6920	6-gingerol analog biosynthesis
JDM601_1578	PWY-7007	methyl ketone biosynthesis
JDM601_1578	PWY-7288	fatty acid &beta;-oxidation (peroxisome, yeast)
JDM601_1578	PWY-7291	oleate &beta;-oxidation (isomerase-dependent, yeast)
JDM601_1578	PWY-7337	10-<i>cis</i>-heptadecenoyl-CoA degradation (yeast)
JDM601_1578	PWY-7338	10-<i>trans</i>-heptadecenoyl-CoA degradation (reductase-dependent, yeast)
JDM601_1578	PWY-7340	9-<i>cis</i>, 11-<i>trans</i>-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)
JDM601_1578	PWY-735	jasmonic acid biosynthesis
JDM601_1578	PWY-7574	propanoyl-CoA degradation II
JDM601_1578	PWY-7606	docosahexaenoate biosynthesis III (mammals)
JDM601_1578	PWY-7726	JDM601_1578
JDM601_1578	PWY-7854	JDM601_1578
JDM601_1578	PWY-7858	JDM601_1578
JDM601_1616	PWY-2941	L-lysine biosynthesis II
JDM601_1616	PWY-2942	L-lysine biosynthesis III
JDM601_1616	PWY-5097	L-lysine biosynthesis VI
JDM601_1636	PWY-7908	JDM601_1636
JDM601_1644	PWY-4261	glycerol degradation I
JDM601_1644	PWY-6118	glycerol-3-phosphate shuttle
JDM601_1644	PWY-6952	glycerophosphodiester degradation
JDM601_1645	PWY-6825	phosphatidylcholine biosynthesis V
JDM601_1648	PWY-4381	fatty acid biosynthesis initiation I
JDM601_1648	PWY-5743	3-hydroxypropanoate cycle
JDM601_1648	PWY-5744	glyoxylate assimilation
JDM601_1648	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_1648	PWY-6722	candicidin biosynthesis
JDM601_1654	PWY-6891	thiazole biosynthesis II (Bacillus)
JDM601_1654	PWY-6892	thiazole biosynthesis I (E. coli)
JDM601_1654	PWY-7560	methylerythritol phosphate pathway II
JDM601_1668	PWY-6936	seleno-amino acid biosynthesis
JDM601_1668	PWY-7274	D-cycloserine biosynthesis
JDM601_1668	PWY-7870	JDM601_1668
JDM601_1669	PWY-6936	seleno-amino acid biosynthesis
JDM601_1675	PWY-6654	phosphopantothenate biosynthesis III
JDM601_1678	PWY-381	nitrate reduction II (assimilatory)
JDM601_1678	PWY-5675	nitrate reduction V (assimilatory)
JDM601_1678	PWY-6549	L-glutamine biosynthesis III
JDM601_1678	PWY-6963	ammonia assimilation cycle I
JDM601_1678	PWY-6964	ammonia assimilation cycle II
JDM601_1682	PWY-381	nitrate reduction II (assimilatory)
JDM601_1682	PWY-5675	nitrate reduction V (assimilatory)
JDM601_1682	PWY-6549	L-glutamine biosynthesis III
JDM601_1682	PWY-6963	ammonia assimilation cycle I
JDM601_1682	PWY-6964	ammonia assimilation cycle II
JDM601_1685	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JDM601_1685	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JDM601_1686	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JDM601_1686	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JDM601_1693	PWY-5057	L-valine degradation II
JDM601_1693	PWY-5076	L-leucine degradation III
JDM601_1693	PWY-5078	L-isoleucine degradation II
JDM601_1693	PWY-5101	L-isoleucine biosynthesis II
JDM601_1693	PWY-5103	L-isoleucine biosynthesis III
JDM601_1693	PWY-5104	L-isoleucine biosynthesis IV
JDM601_1693	PWY-5108	L-isoleucine biosynthesis V
JDM601_1693	PWY-7767	JDM601_1693
JDM601_1695	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JDM601_1695	PWY-6269	adenosylcobalamin salvage from cobinamide II
JDM601_1695	PWY-7961	JDM601_1695
JDM601_1695	PWY-7963	JDM601_1695
JDM601_1695	PWY-7964	JDM601_1695
JDM601_1695	PWY-7965	JDM601_1695
JDM601_1695	PWY-7966	JDM601_1695
JDM601_1695	PWY-7967	JDM601_1695
JDM601_1695	PWY-7968	JDM601_1695
JDM601_1695	PWY-7969	JDM601_1695
JDM601_1695	PWY-7970	JDM601_1695
JDM601_1695	PWY-7975	JDM601_1695
JDM601_1696	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
JDM601_1696	PWY-6269	adenosylcobalamin salvage from cobinamide II
JDM601_1696	PWY-7964	JDM601_1696
JDM601_1696	PWY-7965	JDM601_1696
JDM601_1696	PWY-7966	JDM601_1696
JDM601_1696	PWY-7967	JDM601_1696
JDM601_1696	PWY-7968	JDM601_1696
JDM601_1696	PWY-7969	JDM601_1696
JDM601_1696	PWY-7970	JDM601_1696
JDM601_1703	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_1703	PWY-4521	arsenite oxidation I (respiratory)
JDM601_1703	PWY-6692	Fe(II) oxidation
JDM601_1703	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_1706	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_1706	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_1709	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_1709	PWY-6692	Fe(II) oxidation
JDM601_1709	PWY-7082	ammonia oxidation IV (autotrophic ammonia oxidizers)
JDM601_1709	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_1725	PWY-6164	3-dehydroquinate biosynthesis I
JDM601_1739	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_1739	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_1739	PWY-7953	JDM601_1739
JDM601_1740	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_1740	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_1740	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_1741	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_1741	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_1742	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_1742	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_1742	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_1742	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_1743	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_1743	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_1743	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_1743	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_1744	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_1744	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_1744	PWY-7953	JDM601_1744
JDM601_1756	PWY-5686	UMP biosynthesis
JDM601_1767	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
JDM601_1775	PWY-2201	folate transformations I
JDM601_1775	PWY-3841	folate transformations II
JDM601_1775	PWY-7977	JDM601_1775
JDM601_1781	PWY-6829	tRNA methylation (yeast)
JDM601_1791	PWY-7893	JDM601_1791
JDM601_1806	PWY-7851	JDM601_1806
JDM601_1830	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1830	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_1831	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1832	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1832	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_1834	PWY-4981	L-proline biosynthesis II (from arginine)
JDM601_1834	PWY-4984	urea cycle
JDM601_1834	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_1836	PWY-4983	L-citrulline-nitric oxide cycle
JDM601_1836	PWY-4984	urea cycle
JDM601_1836	PWY-5	canavanine biosynthesis
JDM601_1836	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1836	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_1837	PWY-4983	L-citrulline-nitric oxide cycle
JDM601_1837	PWY-4984	urea cycle
JDM601_1837	PWY-5	canavanine biosynthesis
JDM601_1837	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_1837	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_1851	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
JDM601_1851	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JDM601_1851	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
JDM601_1853	PWY-6898	thiamin salvage III
JDM601_1853	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
JDM601_1853	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
JDM601_1853	PWY-7356	thiamin salvage IV (yeast)
JDM601_1855	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
JDM601_1855	PWY-7177	UTP and CTP dephosphorylation II
JDM601_1855	PWY-7185	UTP and CTP dephosphorylation I
JDM601_1864	PWY-7205	CMP phosphorylation
JDM601_1917	PWY-5269	cardiolipin biosynthesis II
JDM601_1917	PWY-5668	cardiolipin biosynthesis I
JDM601_1917	PWY-7817	JDM601_1917
JDM601_1929	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_1929	PWY-7118	chitin degradation to ethanol
JDM601_1929	PWY-7294	xylose degradation IV
JDM601_1929	PWY-7295	L-arabinose degradation IV
JDM601_1929	PWY-7854	JDM601_1929
JDM601_1933	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JDM601_1933	PWY-6596	adenosine nucleotides degradation I
JDM601_1933	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_1950	PWY-3162	L-tryptophan degradation V (side chain pathway)
JDM601_1950	PWY-5057	L-valine degradation II
JDM601_1950	PWY-5076	L-leucine degradation III
JDM601_1950	PWY-5078	L-isoleucine degradation II
JDM601_1950	PWY-5079	L-phenylalanine degradation III
JDM601_1950	PWY-5082	L-methionine degradation III
JDM601_1950	PWY-5480	pyruvate fermentation to ethanol I
JDM601_1950	PWY-5486	pyruvate fermentation to ethanol II
JDM601_1950	PWY-5751	phenylethanol biosynthesis
JDM601_1950	PWY-6313	serotonin degradation
JDM601_1950	PWY-6333	acetaldehyde biosynthesis I
JDM601_1950	PWY-6342	noradrenaline and adrenaline degradation
JDM601_1950	PWY-6587	pyruvate fermentation to ethanol III
JDM601_1950	PWY-6802	salidroside biosynthesis
JDM601_1950	PWY-6871	3-methylbutanol biosynthesis
JDM601_1950	PWY-7013	L-1,2-propanediol degradation
JDM601_1950	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_1950	PWY-7118	chitin degradation to ethanol
JDM601_1950	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_1977	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JDM601_1984	PWY-723	alkylnitronates degradation
JDM601_1992	PWY-6454	vancomycin resistance I
JDM601_1992	PWY-6455	vancomycin resistance II
JDM601_1997	PWY-6483	ceramide degradation
JDM601_1997	PWY-7119	sphingolipid recycling and degradation (yeast)
JDM601_2004	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_2107	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_2107	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_2111	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_2111	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_2120	PWY-7893	JDM601_2120
JDM601_2128	PWY-1042	glycolysis IV (plant cytosol)
JDM601_2128	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
JDM601_2128	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_2128	PWY-5723	Rubisco shunt
JDM601_2128	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_2128	PWY-6886	1-butanol autotrophic biosynthesis
JDM601_2128	PWY-6901	superpathway of glucose and xylose degradation
JDM601_2128	PWY-7003	glycerol degradation to butanol
JDM601_2128	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
JDM601_2128	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JDM601_2135	PWY-5958	acridone alkaloid biosynthesis
JDM601_2135	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
JDM601_2135	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
JDM601_2150	PWY-5316	nicotine biosynthesis
JDM601_2150	PWY-5381	pyridine nucleotide cycling (plants)
JDM601_2150	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
JDM601_2150	PWY-7342	superpathway of nicotine biosynthesis
JDM601_2151	PWY-5316	nicotine biosynthesis
JDM601_2151	PWY-7342	superpathway of nicotine biosynthesis
JDM601_2152	PWY-5316	nicotine biosynthesis
JDM601_2152	PWY-7342	superpathway of nicotine biosynthesis
JDM601_2157	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JDM601_2161	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
JDM601_2178	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_2178	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_2185	PWY-7884	JDM601_2185
JDM601_2222	PWY-5743	3-hydroxypropanoate cycle
JDM601_2222	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_2222	PWY-6728	methylaspartate cycle
JDM601_2222	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
JDM601_2222	PWY-7854	JDM601_2222
JDM601_2231	PWY-5971	palmitate biosynthesis II (bacteria and plants)
JDM601_2231	PWY-5973	<i>cis</i>-vaccenate biosynthesis
JDM601_2231	PWY-5989	stearate biosynthesis II (bacteria and plants)
JDM601_2231	PWY-6113	superpathway of mycolate biosynthesis
JDM601_2231	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
JDM601_2231	PWY-6519	8-amino-7-oxononanoate biosynthesis I
JDM601_2231	PWY-7663	gondoate biosynthesis (anaerobic)
JDM601_2231	PWY-7664	oleate biosynthesis IV (anaerobic)
JDM601_2231	PWY-7858	JDM601_2231
JDM601_2231	PWYG-321	mycolate biosynthesis
JDM601_2251	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JDM601_2267	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_2267	PWY-5723	Rubisco shunt
JDM601_2267	PWY-6891	thiazole biosynthesis II (Bacillus)
JDM601_2267	PWY-6892	thiazole biosynthesis I (E. coli)
JDM601_2267	PWY-6901	superpathway of glucose and xylose degradation
JDM601_2267	PWY-7560	methylerythritol phosphate pathway II
JDM601_2268	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_2268	PWY-5723	Rubisco shunt
JDM601_2269	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JDM601_2271	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
JDM601_2271	PWY-6855	chitin degradation I (archaea)
JDM601_2271	PWY-6906	chitin derivatives degradation
JDM601_2274	PWY-1042	glycolysis IV (plant cytosol)
JDM601_2274	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_2274	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_2274	PWY-7003	glycerol degradation to butanol
JDM601_2275	PWY-1042	glycolysis IV (plant cytosol)
JDM601_2275	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_2275	PWY-6886	1-butanol autotrophic biosynthesis
JDM601_2275	PWY-6901	superpathway of glucose and xylose degradation
JDM601_2275	PWY-7003	glycerol degradation to butanol
JDM601_2276	PWY-1042	glycolysis IV (plant cytosol)
JDM601_2276	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_2276	PWY-6901	superpathway of glucose and xylose degradation
JDM601_2276	PWY-7003	glycerol degradation to butanol
JDM601_2284	PWY-6167	flavin biosynthesis II (archaea)
JDM601_2284	PWY-6168	flavin biosynthesis III (fungi)
JDM601_2285	PWY-6167	flavin biosynthesis II (archaea)
JDM601_2285	PWY-6168	flavin biosynthesis III (fungi)
JDM601_2285	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JDM601_2285	PWY-7991	JDM601_2285
JDM601_2286	PWY-6167	flavin biosynthesis II (archaea)
JDM601_2286	PWY-6168	flavin biosynthesis III (fungi)
JDM601_2286	PWY-7980	JDM601_2286
JDM601_2289	PWY-7991	JDM601_2289
JDM601_2290	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_2290	PWY-5723	Rubisco shunt
JDM601_2302	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JDM601_2302	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
JDM601_2304	PWY-7072	hopanoid biosynthesis (bacteria)
JDM601_2305	PWY-7851	JDM601_2305
JDM601_2307	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_2310	PWY-5686	UMP biosynthesis
JDM601_2310	PWY-7790	JDM601_2310
JDM601_2310	PWY-7791	JDM601_2310
JDM601_2311	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_2311	PWY-5686	UMP biosynthesis
JDM601_2311	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_2311	PWY-7790	JDM601_2311
JDM601_2311	PWY-7791	JDM601_2311
JDM601_2312	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_2312	PWY-5686	UMP biosynthesis
JDM601_2312	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_2312	PWY-7790	JDM601_2312
JDM601_2312	PWY-7791	JDM601_2312
JDM601_2314	PWY-5686	UMP biosynthesis
JDM601_2314	PWY-7790	JDM601_2314
JDM601_2314	PWY-7791	JDM601_2314
JDM601_2315	PWY-5686	UMP biosynthesis
JDM601_2315	PWY-7790	JDM601_2315
JDM601_2315	PWY-7791	JDM601_2315
JDM601_2316	PWY-7183	pyrimidine nucleobases salvage I
JDM601_2330	PWY-7799	JDM601_2330
JDM601_2330	PWY-7800	JDM601_2330
JDM601_2331	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JDM601_2331	PWY-6416	quinate degradation II
JDM601_2331	PWY-6707	gallate biosynthesis
JDM601_2333	PWY-6164	3-dehydroquinate biosynthesis I
JDM601_2334	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JDM601_2335	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JDM601_2338	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JDM601_2338	PWY-6164	3-dehydroquinate biosynthesis I
JDM601_2338	PWY-6416	quinate degradation II
JDM601_2338	PWY-6707	gallate biosynthesis
JDM601_2351	PWY-3162	L-tryptophan degradation V (side chain pathway)
JDM601_2351	PWY-5057	L-valine degradation II
JDM601_2351	PWY-5076	L-leucine degradation III
JDM601_2351	PWY-5078	L-isoleucine degradation II
JDM601_2351	PWY-5079	L-phenylalanine degradation III
JDM601_2351	PWY-5082	L-methionine degradation III
JDM601_2351	PWY-5480	pyruvate fermentation to ethanol I
JDM601_2351	PWY-5486	pyruvate fermentation to ethanol II
JDM601_2351	PWY-5751	phenylethanol biosynthesis
JDM601_2351	PWY-6313	serotonin degradation
JDM601_2351	PWY-6333	acetaldehyde biosynthesis I
JDM601_2351	PWY-6342	noradrenaline and adrenaline degradation
JDM601_2351	PWY-6587	pyruvate fermentation to ethanol III
JDM601_2351	PWY-6802	salidroside biosynthesis
JDM601_2351	PWY-6871	3-methylbutanol biosynthesis
JDM601_2351	PWY-7013	L-1,2-propanediol degradation
JDM601_2351	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_2351	PWY-7118	chitin degradation to ethanol
JDM601_2351	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_2371	PWY-6605	adenine and adenosine salvage II
JDM601_2371	PWY-6610	adenine and adenosine salvage IV
JDM601_2371	PWY-7805	JDM601_2371
JDM601_2371	PWY-7807	JDM601_2371
JDM601_2386	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
JDM601_2388	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
JDM601_2401	PWY-723	alkylnitronates degradation
JDM601_2423	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JDM601_2424	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
JDM601_2424	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
JDM601_2424	PWY-7766	JDM601_2424
JDM601_2427	PWY-6891	thiazole biosynthesis II (Bacillus)
JDM601_2427	PWY-6892	thiazole biosynthesis I (E. coli)
JDM601_2427	PWY-7560	methylerythritol phosphate pathway II
JDM601_2460	PWY-5663	tetrahydrobiopterin biosynthesis I
JDM601_2460	PWY-5664	tetrahydrobiopterin biosynthesis II
JDM601_2460	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JDM601_2460	PWY-6703	preQ<sub>0</sub> biosynthesis
JDM601_2460	PWY-6983	tetrahydrobiopterin biosynthesis III
JDM601_2460	PWY-7442	drosopterin and aurodrosopterin biosynthesis
JDM601_2460	PWY-7852	JDM601_2460
JDM601_2462	PWY-723	alkylnitronates degradation
JDM601_2468	PWY-2941	L-lysine biosynthesis II
JDM601_2468	PWY-5097	L-lysine biosynthesis VI
JDM601_2469	PWY-2781	<i>cis</i>-zeatin biosynthesis
JDM601_2487	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_2487	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_2487	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_2487	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_2495	PWY-5269	cardiolipin biosynthesis II
JDM601_2495	PWY-5668	cardiolipin biosynthesis I
JDM601_2495	PWY-7817	JDM601_2495
JDM601_2503	PWY-2941	L-lysine biosynthesis II
JDM601_2503	PWY-2942	L-lysine biosynthesis III
JDM601_2503	PWY-5097	L-lysine biosynthesis VI
JDM601_2504	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_2509	PWY-3841	folate transformations II
JDM601_2509	PWY-6614	tetrahydrofolate biosynthesis
JDM601_2510	PWY-3841	folate transformations II
JDM601_2510	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2510	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2510	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_2510	PWY-7199	pyrimidine deoxyribonucleosides salvage
JDM601_2510	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_2519	PWY-4381	fatty acid biosynthesis initiation I
JDM601_2519	PWY-5743	3-hydroxypropanoate cycle
JDM601_2519	PWY-5744	glyoxylate assimilation
JDM601_2519	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_2519	PWY-6722	candicidin biosynthesis
JDM601_2526	PWY-2941	L-lysine biosynthesis II
JDM601_2526	PWY-2942	L-lysine biosynthesis III
JDM601_2526	PWY-5097	L-lysine biosynthesis VI
JDM601_2533	PWY-723	alkylnitronates degradation
JDM601_2538	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
JDM601_2538	PWY-6167	flavin biosynthesis II (archaea)
JDM601_2538	PWY-6168	flavin biosynthesis III (fungi)
JDM601_2538	PWY-7863	JDM601_2538
JDM601_2550	PWY-6012	acyl carrier protein metabolism I
JDM601_2550	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
JDM601_2550	PWY-6289	petrobactin biosynthesis
JDM601_2561	PWY-7805	JDM601_2561
JDM601_2561	PWY-7807	JDM601_2561
JDM601_2571	PWY-5194	siroheme biosynthesis
JDM601_2571	PWY-5196	factor 430 biosynthesis
JDM601_2571	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JDM601_2572	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_2573	PWY-6421	arsenate detoxification III (mycothiol)
JDM601_2581	PWY-381	nitrate reduction II (assimilatory)
JDM601_2581	PWY-5675	nitrate reduction V (assimilatory)
JDM601_2581	PWY-6549	L-glutamine biosynthesis III
JDM601_2581	PWY-6963	ammonia assimilation cycle I
JDM601_2581	PWY-6964	ammonia assimilation cycle II
JDM601_2584	PWY-7799	JDM601_2584
JDM601_2584	PWY-7800	JDM601_2584
JDM601_2590	PWY-7560	methylerythritol phosphate pathway II
JDM601_2598	PWY-5667	CDP-diacylglycerol biosynthesis I
JDM601_2598	PWY-5981	CDP-diacylglycerol biosynthesis III
JDM601_2598	PWY-7817	JDM601_2598
JDM601_2609	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JDM601_2627	PWY-6829	tRNA methylation (yeast)
JDM601_2627	PWY-7285	methylwyosine biosynthesis
JDM601_2627	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
JDM601_2660	PWY-2201	folate transformations I
JDM601_2660	PWY-5497	purine nucleobases degradation II (anaerobic)
JDM601_2660	PWY-7909	JDM601_2660
JDM601_2668	PWY-7851	JDM601_2668
JDM601_2670	PWY-5750	itaconate biosynthesis
JDM601_2670	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_2670	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
JDM601_2682	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
JDM601_2682	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
JDM601_2682	PWY-6896	thiamin salvage I
JDM601_2682	PWY-6897	thiamin salvage II
JDM601_2684	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
JDM601_2684	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
JDM601_2684	PWY-7953	JDM601_2684
JDM601_2685	PWY-5667	CDP-diacylglycerol biosynthesis I
JDM601_2685	PWY-5981	CDP-diacylglycerol biosynthesis III
JDM601_2685	PWY-7902	JDM601_2685
JDM601_2686	PWY-5198	factor 420 biosynthesis
JDM601_2693	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_2693	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_2694	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
JDM601_2698	PWY-6409	pyoverdine I biosynthesis
JDM601_2698	PWY-6562	norspermidine biosynthesis
JDM601_2698	PWY-761	rhizobactin 1021 biosynthesis
JDM601_2698	PWY-7855	JDM601_2698
JDM601_2698	PWY-7988	JDM601_2698
JDM601_2702	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JDM601_2713	PWY-6041	4-sulfocatechol degradation
JDM601_2714	PWY-6041	4-sulfocatechol degradation
JDM601_2717	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_2720	PWY-5103	L-isoleucine biosynthesis III
JDM601_2720	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_2721	PWY-5101	L-isoleucine biosynthesis II
JDM601_2721	PWY-5103	L-isoleucine biosynthesis III
JDM601_2721	PWY-5104	L-isoleucine biosynthesis IV
JDM601_2721	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JDM601_2721	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JDM601_2721	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JDM601_2721	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_2722	PWY-5101	L-isoleucine biosynthesis II
JDM601_2722	PWY-5103	L-isoleucine biosynthesis III
JDM601_2722	PWY-5104	L-isoleucine biosynthesis IV
JDM601_2722	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
JDM601_2722	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
JDM601_2722	PWY-6389	(<i>S</i>)-acetoin biosynthesis
JDM601_2722	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_2729	PWY-6899	base-degraded thiamin salvage
JDM601_2729	PWY-7356	thiamin salvage IV (yeast)
JDM601_2732	PWY-1042	glycolysis IV (plant cytosol)
JDM601_2732	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
JDM601_2732	PWY-5484	glycolysis II (from fructose 6-phosphate)
JDM601_2732	PWY-7385	1,3-propanediol biosynthesis (engineered)
JDM601_2734	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
JDM601_2739	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JDM601_2739	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
JDM601_2739	PWY-6936	seleno-amino acid biosynthesis
JDM601_2739	PWY-702	L-methionine biosynthesis II
JDM601_2741	PWY-7887	JDM601_2741
JDM601_2741	PWY-7892	JDM601_2741
JDM601_2742	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
JDM601_2751	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JDM601_2751	PWY-622	starch biosynthesis
JDM601_2751	PWY-7900	JDM601_2751
JDM601_2771	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_2771	PWY-4521	arsenite oxidation I (respiratory)
JDM601_2771	PWY-6692	Fe(II) oxidation
JDM601_2771	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_2776	PWY-5350	thiosulfate disproportionation III (rhodanese)
JDM601_2776	PWY-7927	JDM601_2776
JDM601_2780	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_2780	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2780	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_2780	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_2780	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2780	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2780	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2780	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JDM601_2787	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_2787	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2787	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_2787	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_2787	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2787	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2787	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2787	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
JDM601_2795	PWY-6871	3-methylbutanol biosynthesis
JDM601_2914	PWY-5381	pyridine nucleotide cycling (plants)
JDM601_2914	PWY-7761	JDM601_2914
JDM601_2930	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
JDM601_2930	PWY-5901	2,3-dihydroxybenzoate biosynthesis
JDM601_2930	PWY-6406	salicylate biosynthesis I
JDM601_2963	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
JDM601_2974	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_2974	PWY-4521	arsenite oxidation I (respiratory)
JDM601_2974	PWY-6692	Fe(II) oxidation
JDM601_2974	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_2987	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
JDM601_2987	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
JDM601_2987	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
JDM601_2987	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
JDM601_2987	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
JDM601_2987	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
JDM601_2988	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
JDM601_3004	PWY-3861	mannitol degradation II
JDM601_3004	PWY-3881	mannitol biosynthesis
JDM601_3004	PWY-5659	GDP-mannose biosynthesis
JDM601_3004	PWY-6992	1,5-anhydrofructose degradation
JDM601_3004	PWY-7456	mannan degradation
JDM601_3004	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
JDM601_3004	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
JDM601_3006	PWY-6749	CMP-legionaminate biosynthesis I
JDM601_3010	PWY-5198	factor 420 biosynthesis
JDM601_3011	PWY-5199	factor 420 polyglutamylation
JDM601_3027	PWY-5482	pyruvate fermentation to acetate II
JDM601_3027	PWY-5485	pyruvate fermentation to acetate IV
JDM601_3027	PWY-5497	purine nucleobases degradation II (anaerobic)
JDM601_3028	PWY-1281	sulfoacetaldehyde degradation I
JDM601_3028	PWY-5482	pyruvate fermentation to acetate II
JDM601_3028	PWY-5485	pyruvate fermentation to acetate IV
JDM601_3028	PWY-5497	purine nucleobases degradation II (anaerobic)
JDM601_3028	PWY-6637	sulfolactate degradation II
JDM601_3029	PWY-6832	2-aminoethylphosphonate degradation II
JDM601_3032	PWY-6123	inosine-5'-phosphate biosynthesis I
JDM601_3032	PWY-7234	inosine-5'-phosphate biosynthesis III
JDM601_3036	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
JDM601_3036	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
JDM601_3039	PWY-4381	fatty acid biosynthesis initiation I
JDM601_3039	PWY-5743	3-hydroxypropanoate cycle
JDM601_3039	PWY-5744	glyoxylate assimilation
JDM601_3039	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_3039	PWY-6722	candicidin biosynthesis
JDM601_3043	PWY-5350	thiosulfate disproportionation III (rhodanese)
JDM601_3043	PWY-7927	JDM601_3043
JDM601_3060	PWY-7165	L-ascorbate biosynthesis VI (engineered pathway)
JDM601_3103	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
JDM601_3103	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_3125	PWY-4261	glycerol degradation I
JDM601_3125	PWY-6118	glycerol-3-phosphate shuttle
JDM601_3125	PWY-6952	glycerophosphodiester degradation
JDM601_3131	PWY-4202	arsenate detoxification I (glutaredoxin)
JDM601_3131	PWY-5532	adenosine nucleotides degradation IV
JDM601_3131	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JDM601_3131	PWY-6608	guanosine nucleotides degradation III
JDM601_3131	PWY-6609	adenine and adenosine salvage III
JDM601_3131	PWY-6611	adenine and adenosine salvage V
JDM601_3131	PWY-6620	guanine and guanosine salvage
JDM601_3131	PWY-6627	salinosporamide A biosynthesis
JDM601_3131	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
JDM601_3131	PWY-7179	purine deoxyribonucleosides degradation I
JDM601_3131	PWY-7179-1	purine deoxyribonucleosides degradation
JDM601_3133	PWY-6749	CMP-legionaminate biosynthesis I
JDM601_3134	PWY-7183	pyrimidine nucleobases salvage I
JDM601_3140	PWY-6609	adenine and adenosine salvage III
JDM601_3140	PWY-6611	adenine and adenosine salvage V
JDM601_3140	PWY-7179	purine deoxyribonucleosides degradation I
JDM601_3140	PWY-7179-1	purine deoxyribonucleosides degradation
JDM601_3141	PWY-7181	pyrimidine deoxyribonucleosides degradation
JDM601_3145	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_3145	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JDM601_3145	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JDM601_3145	PWY-5690	TCA cycle II (plants and fungi)
JDM601_3145	PWY-6728	methylaspartate cycle
JDM601_3145	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_3145	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_3145	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_3146	PWY-3781	aerobic respiration I (cytochrome c)
JDM601_3146	PWY-4302	aerobic respiration III (alternative oxidase pathway)
JDM601_3146	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
JDM601_3146	PWY-5690	TCA cycle II (plants and fungi)
JDM601_3146	PWY-6728	methylaspartate cycle
JDM601_3146	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_3146	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_3146	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
JDM601_3147	PWY-6032	cardenolide biosynthesis
JDM601_3147	PWY-7455	allopregnanolone biosynthesis
JDM601_3155	PWY-6906	chitin derivatives degradation
JDM601_3155	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
JDM601_3155	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
JDM601_3162	PWY-6683	sulfate reduction III (assimilatory)
JDM601_3165	PWY-5194	siroheme biosynthesis
JDM601_3165	PWY-5196	factor 430 biosynthesis
JDM601_3165	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JDM601_3166	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
JDM601_3179	PWY-7376	cob(II)yrinate <i>a,c</i>-diamide biosynthesis II (late cobalt incorporation)
JDM601_3187	PWY-5913	TCA cycle VI (obligate autotrophs)
JDM601_3187	PWY-6549	L-glutamine biosynthesis III
JDM601_3187	PWY-6728	methylaspartate cycle
JDM601_3187	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
JDM601_3187	PWY-7124	ethylene biosynthesis V (engineered)
JDM601_3187	PWY-7254	TCA cycle VII (acetate-producers)
JDM601_3187	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
JDM601_3194	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
JDM601_3194	PWY-2201	folate transformations I
JDM601_3194	PWY-3841	folate transformations II
JDM601_3194	PWY-5030	L-histidine degradation III
JDM601_3194	PWY-5497	purine nucleobases degradation II (anaerobic)
JDM601_3194	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
JDM601_3194	PWY-7909	JDM601_3194
JDM601_3218	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_3223	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
JDM601_3223	PWY-6596	adenosine nucleotides degradation I
JDM601_3223	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_3243	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JDM601_3245	PWY-4321	L-glutamate degradation IV
JDM601_3246	PWY-6938	NADH repair
JDM601_3251	PWY-6749	CMP-legionaminate biosynthesis I
JDM601_3254	PWY-5098	chlorophyll <i>a</i> degradation I
JDM601_3254	PWY-6927	chlorophyll <i>a</i> degradation II
JDM601_3254	PWY-7164	chlorophyll <i>a</i> degradation III
JDM601_3267	PWY-6749	CMP-legionaminate biosynthesis I
JDM601_3287	PWY-3221	dTDP-L-rhamnose biosynthesis II
JDM601_3287	PWY-6808	dTDP-D-forosamine biosynthesis
JDM601_3287	PWY-6942	dTDP-D-desosamine biosynthesis
JDM601_3287	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
JDM601_3287	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
JDM601_3287	PWY-6974	dTDP-L-olivose biosynthesis
JDM601_3287	PWY-6976	dTDP-L-mycarose biosynthesis
JDM601_3287	PWY-7104	dTDP-L-megosamine biosynthesis
JDM601_3287	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
JDM601_3287	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
JDM601_3287	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
JDM601_3287	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
JDM601_3287	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
JDM601_3287	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
JDM601_3287	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
JDM601_3287	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
JDM601_3287	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
JDM601_3287	PWY-7688	JDM601_3287
JDM601_3287	PWY-7814	JDM601_3287
JDM601_3291	PWY-5642	2,4-dinitrotoluene degradation
JDM601_3299	PWY-7799	JDM601_3299
JDM601_3299	PWY-7800	JDM601_3299
JDM601_3300	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_3346	PWY-6167	flavin biosynthesis II (archaea)
JDM601_3453	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
JDM601_3453	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
JDM601_3453	PWY-7717	JDM601_3453
JDM601_3453	PWY-7733	JDM601_3453
JDM601_3453	PWY-7734	JDM601_3453
JDM601_3453	PWY-7765	JDM601_3453
JDM601_3512	PWY-2941	L-lysine biosynthesis II
JDM601_3512	PWY-2942	L-lysine biosynthesis III
JDM601_3512	PWY-5097	L-lysine biosynthesis VI
JDM601_3545	PWY-5350	thiosulfate disproportionation III (rhodanese)
JDM601_3545	PWY-7927	JDM601_3545
JDM601_3551	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3551	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3551	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3566	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3566	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3566	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3566	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
JDM601_3569	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3569	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3569	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3573	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3573	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3573	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3574	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3574	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3574	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3581	PWY-6123	inosine-5'-phosphate biosynthesis I
JDM601_3581	PWY-6124	inosine-5'-phosphate biosynthesis II
JDM601_3581	PWY-7234	inosine-5'-phosphate biosynthesis III
JDM601_3587	PWY-6123	inosine-5'-phosphate biosynthesis I
JDM601_3587	PWY-6124	inosine-5'-phosphate biosynthesis II
JDM601_3587	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
JDM601_3587	PWY-7234	inosine-5'-phosphate biosynthesis III
JDM601_3594	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
JDM601_3594	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
JDM601_3594	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
JDM601_3610	PWY-3162	L-tryptophan degradation V (side chain pathway)
JDM601_3610	PWY-5057	L-valine degradation II
JDM601_3610	PWY-5076	L-leucine degradation III
JDM601_3610	PWY-5078	L-isoleucine degradation II
JDM601_3610	PWY-5079	L-phenylalanine degradation III
JDM601_3610	PWY-5082	L-methionine degradation III
JDM601_3610	PWY-5480	pyruvate fermentation to ethanol I
JDM601_3610	PWY-5486	pyruvate fermentation to ethanol II
JDM601_3610	PWY-5751	phenylethanol biosynthesis
JDM601_3610	PWY-6313	serotonin degradation
JDM601_3610	PWY-6333	acetaldehyde biosynthesis I
JDM601_3610	PWY-6342	noradrenaline and adrenaline degradation
JDM601_3610	PWY-6587	pyruvate fermentation to ethanol III
JDM601_3610	PWY-6802	salidroside biosynthesis
JDM601_3610	PWY-6871	3-methylbutanol biosynthesis
JDM601_3610	PWY-7013	L-1,2-propanediol degradation
JDM601_3610	PWY-7111	pyruvate fermentation to isobutanol (engineered)
JDM601_3610	PWY-7118	chitin degradation to ethanol
JDM601_3610	PWY-7396	butanol and isobutanol biosynthesis (engineered)
JDM601_3653	PWY-5451	acetone degradation I (to methylglyoxal)
JDM601_3653	PWY-6588	pyruvate fermentation to acetone
JDM601_3653	PWY-6876	isopropanol biosynthesis
JDM601_3653	PWY-7466	acetone degradation III (to propane-1,2-diol)
JDM601_3679	PWY-5162	2-oxopentenoate degradation
JDM601_3680	PWY-5162	2-oxopentenoate degradation
JDM601_3680	PWY-5436	L-threonine degradation IV
JDM601_3680	PWY-5480	pyruvate fermentation to ethanol I
JDM601_3680	PWY-6587	pyruvate fermentation to ethanol III
JDM601_3680	PWY-7085	triethylamine degradation
JDM601_3680	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
JDM601_3707	PWY-723	alkylnitronates degradation
JDM601_3761	PWY-4381	fatty acid biosynthesis initiation I
JDM601_3761	PWY-5743	3-hydroxypropanoate cycle
JDM601_3761	PWY-5744	glyoxylate assimilation
JDM601_3761	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_3761	PWY-6722	candicidin biosynthesis
JDM601_3778	PWY-5686	UMP biosynthesis
JDM601_3778	PWY-7790	JDM601_3778
JDM601_3778	PWY-7791	JDM601_3778
JDM601_3846	PWY-723	alkylnitronates degradation
JDM601_3856	PWY-2661	trehalose biosynthesis V
JDM601_3858	PWY-2661	trehalose biosynthesis V
JDM601_3860	PWY-5941	glycogen degradation II (eukaryotic)
JDM601_3860	PWY-6724	starch degradation II
JDM601_3860	PWY-6737	starch degradation V
JDM601_3860	PWY-7238	sucrose biosynthesis II
JDM601_3861	PWY-2622	trehalose biosynthesis IV
JDM601_3861	PWY-7900	JDM601_3861
JDM601_3863	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
JDM601_3863	PWY-622	starch biosynthesis
JDM601_3863	PWY-7900	JDM601_3863
JDM601_3864	PWY-7900	JDM601_3864
JDM601_3873	PWY-7560	methylerythritol phosphate pathway II
JDM601_3874	PWY-7560	methylerythritol phosphate pathway II
JDM601_3880	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
JDM601_3880	PWY-5743	3-hydroxypropanoate cycle
JDM601_3880	PWY-5744	glyoxylate assimilation
JDM601_3880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_3880	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
JDM601_3880	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
JDM601_3880	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
JDM601_3889	PWY-3961	phosphopantothenate biosynthesis II
JDM601_3890	PWY-5155	&beta;-alanine biosynthesis III
JDM601_3895	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JDM601_3895	PWY-6148	tetrahydromethanopterin biosynthesis
JDM601_3895	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JDM601_3895	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JDM601_3895	PWY-7852	JDM601_3895
JDM601_3895	PWY-7853	JDM601_3895
JDM601_3896	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JDM601_3896	PWY-6148	tetrahydromethanopterin biosynthesis
JDM601_3896	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
JDM601_3896	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
JDM601_3897	PWY-6614	tetrahydrofolate biosynthesis
JDM601_3898	PWY-5663	tetrahydrobiopterin biosynthesis I
JDM601_3898	PWY-5664	tetrahydrobiopterin biosynthesis II
JDM601_3898	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
JDM601_3898	PWY-6703	preQ<sub>0</sub> biosynthesis
JDM601_3898	PWY-6983	tetrahydrobiopterin biosynthesis III
JDM601_3898	PWY-7442	drosopterin and aurodrosopterin biosynthesis
JDM601_3898	PWY-7852	JDM601_3898
JDM601_3906	PWY-6599	guanine and guanosine salvage II
JDM601_3906	PWY-6609	adenine and adenosine salvage III
JDM601_3906	PWY-6610	adenine and adenosine salvage IV
JDM601_3906	PWY-6620	guanine and guanosine salvage
JDM601_3909	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_3909	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_3911	PWY-7805	JDM601_3911
JDM601_3911	PWY-7807	JDM601_3911
JDM601_3945	PWY-5108	L-isoleucine biosynthesis V
JDM601_3945	PWY-5132	humulone biosynthesis
JDM601_3945	PWY-5133	cohumulone biosynthesis
JDM601_3945	PWY-6672	<i>cis</i>-genanyl-CoA degradation
JDM601_3945	PWY-7118	chitin degradation to ethanol
JDM601_3945	PWY-7857	JDM601_3945
JDM601_3961	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_3961	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_3961	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_3961	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_3977	PWY-4261	glycerol degradation I
JDM601_3981	PWY-7255	ergothioneine biosynthesis I (bacteria)
JDM601_3981	PWY-7550	ergothioneine biosynthesis II (fungi)
JDM601_3982	PWY-7255	ergothioneine biosynthesis I (bacteria)
JDM601_3983	PWY-7255	ergothioneine biosynthesis I (bacteria)
JDM601_3984	PWY-6840	homoglutathione biosynthesis
JDM601_3984	PWY-7255	ergothioneine biosynthesis I (bacteria)
JDM601_3990	PWY-2941	L-lysine biosynthesis II
JDM601_3990	PWY-2942	L-lysine biosynthesis III
JDM601_3990	PWY-5097	L-lysine biosynthesis VI
JDM601_3990	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
JDM601_3990	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
JDM601_3990	PWY-6559	spermidine biosynthesis II
JDM601_3990	PWY-6562	norspermidine biosynthesis
JDM601_3990	PWY-7153	grixazone biosynthesis
JDM601_3990	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
JDM601_3990	PWY-7977	JDM601_3990
JDM601_3991	PWY-2941	L-lysine biosynthesis II
JDM601_3991	PWY-2942	L-lysine biosynthesis III
JDM601_3991	PWY-5097	L-lysine biosynthesis VI
JDM601_3991	PWY-6160	3-dehydroquinate biosynthesis II (archaea)
JDM601_3991	PWY-6559	spermidine biosynthesis II
JDM601_3991	PWY-6562	norspermidine biosynthesis
JDM601_3991	PWY-7153	grixazone biosynthesis
JDM601_3991	PWY-7977	JDM601_3991
JDM601_3993	PWY-6871	3-methylbutanol biosynthesis
JDM601_4036	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
JDM601_4101	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JDM601_4116	PWY-4381	fatty acid biosynthesis initiation I
JDM601_4116	PWY-5743	3-hydroxypropanoate cycle
JDM601_4116	PWY-5744	glyoxylate assimilation
JDM601_4116	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
JDM601_4116	PWY-6722	candicidin biosynthesis
JDM601_4127	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
JDM601_4127	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
JDM601_4127	PWY-7622	UDP-galactofuranose biosynthesis
JDM601_4143	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
JDM601_4148	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
JDM601_4158	PWY-6854	ethylene biosynthesis III (microbes)
JDM601_4167	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
JDM601_4178	PWY-381	nitrate reduction II (assimilatory)
JDM601_4178	PWY-5675	nitrate reduction V (assimilatory)
JDM601_4178	PWY-6549	L-glutamine biosynthesis III
JDM601_4178	PWY-6963	ammonia assimilation cycle I
JDM601_4178	PWY-6964	ammonia assimilation cycle II
JDM601_4221	PWY-5451	acetone degradation I (to methylglyoxal)
JDM601_4221	PWY-6588	pyruvate fermentation to acetone
JDM601_4221	PWY-6876	isopropanol biosynthesis
JDM601_4221	PWY-7466	acetone degradation III (to propane-1,2-diol)
JDM601_4310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_4310	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_4310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_4310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_4311	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
JDM601_4311	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
JDM601_4311	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
JDM601_4311	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
JDM601_4315	PWY-2301	<i>myo</i>-inositol biosynthesis
JDM601_4315	PWY-4661	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis III (<i>Spirodela polyrrhiza</i>)
JDM601_4315	PWY-6372	1D-<i>myo</i>-inositol hexakisphosphate biosynthesis IV (<i>Dictyostelium</i>)
JDM601_4315	PWY-6580	phosphatidylinositol biosynthesis I (bacteria)
JDM601_4315	PWY-6664	di-myo-inositol phosphate biosynthesis
JDM601_4328	PWY-7285	methylwyosine biosynthesis
JDM601_4328	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
